BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781094|ref|YP_003065507.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] (702 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781094|ref|YP_003065507.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040771|gb|ACT57567.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 702 Score = 1425 bits (3688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 702/702 (100%), Positives = 702/702 (100%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS Sbjct: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI Sbjct: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL Sbjct: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG Sbjct: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA Sbjct: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD Sbjct: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA Sbjct: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA Sbjct: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD Sbjct: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL Sbjct: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP Sbjct: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV Sbjct: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 >gi|315122428|ref|YP_004062917.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495830|gb|ADR52429.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 700 Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/702 (77%), Positives = 610/702 (86%), Gaps = 3/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEIYSEEIPARMQ KA EDL + LLKE G+ Y+++RQYWTP RLF+YLKGL+ Sbjct: 2 MLGFLLEIYSEEIPARMQRKATEDLGKNVTRLLKEYGLSYESIRQYWTPRRLFVYLKGLT 61 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P SPEKIEERLGPRVGA +KAI+GFL STGL+ ISDC+IKKDPKKGD+YLAV++KPKRL Sbjct: 62 PSSPEKIEERLGPRVGASQKAIEGFLHSTGLKKISDCKIKKDPKKGDLYLAVIKKPKRLA 121 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++K IVP+AIQ VPWPKSMRWST +SP+S FSWIRPL+SILC+L +++ K IIDL+L Sbjct: 122 EDIIKEIVPIAIQNVPWPKSMRWSTNNSPVSDFSWIRPLQSILCVLFSKEGKSTIIDLNL 181 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 K IPCGNITYGHRFHAP PIKV+ LD YI LE+A VLLDPE RRN IL DA L+S G Sbjct: 182 KGIPCGNITYGHRFHAPQPIKVKCLDSYISGLEKAKVLLDPEHRRNTILRDARLLSSVNG 241 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +ELVED LLEEI+GLVEWVQV +GSFD+KYLCLPEELIRLTIKTNQKCFVTRTR+G LA Sbjct: 242 VELVEDDGLLEEIVGLVEWVQVLIGSFDEKYLCLPEELIRLTIKTNQKCFVTRTRQGKLA 301 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSNIQASDGG AIVQGNS+VVAARLEDALHFWKRDQ NLP++ SLKESALKFNLD Sbjct: 302 NRFILVSNIQASDGGIAIVQGNSKVVAARLEDALHFWKRDQENLPDIDSLKESALKFNLD 361 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 LSKPLDQRMA+LD L+VVFHAKIGTQGERVSRIR+LGKKIAQLI D+ALVDRA VL KA Sbjct: 362 LSKPLDQRMAKLDALNVVFHAKIGTQGERVSRIRLLGKKIAQLIGVDIALVDRAAVLLKA 421 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DLCT+IVREFPELQGKIGKEYA LQNE I AIEEHLKPRGPLE VPT+KISIT+SLA Sbjct: 422 DLCTDIVREFPELQGKIGKEYANLQNETIVL--AIEEHLKPRGPLETVPTDKISITLSLA 479 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTLINFWAINEKPSGS+DPYALRRA LGIIRIILENKI IPLSQF+EDQNLILFFH Sbjct: 480 DKLDTLINFWAINEKPSGSQDPYALRRAALGIIRIILENKIHIPLSQFVEDQNLILFFHV 539 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 RLKLYL + IRHDLIEAIL+PENDNLL IVDLIK+LNEFF+S KG+ FL SAKRI QIL Sbjct: 540 RLKLYLREIGIRHDLIEAILQPENDNLLVIVDLIKYLNEFFNSEKGKNFLFSAKRILQIL 599 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 AIEEKK REI L I+PQ LEAEK+LY VISD HI++SM + YH+IGDLL S+ EP Sbjct: 600 AIEEKKGREI-LPIAPQKFSLEAEKKLYTVISDLDLHIKDSMHNNAYHRIGDLLFSLHEP 658 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 IE FFD V+VNV+D+EVR+NRL+LLQ K II+ V ++QKIV Sbjct: 659 IESFFDNVMVNVEDQEVRNNRLALLQCTKKIIMKVFDIQKIV 700 >gi|241203330|ref|YP_002974426.1| glycyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857220|gb|ACS54887.1| glycyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 704 Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/702 (53%), Positives = 493/702 (70%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVSDVMPGIIRDFPWPKSMRWGKASSKPGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y +LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAITVRRFDDYAANLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-VL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + G L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRPQGGETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQASDGG IV GN +VV ARL DALHFWKRDQ NLP+L +L+ SA KF L Sbjct: 301 SNKFILVSNIQASDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLEASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL+DRA VL+K Sbjct: 361 DLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRTLAKELADITGADAALIDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YAVLQ E+ S AIE+H KP+GP + VP ++++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAVLQGEDASVAAAIEDHYKPQGPSDRVPEDRVAITIAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTLI FWAI+EKP+GSKDP+ALRRA LG++RI+LE +I +PL +D +L+ FFH Sbjct: 481 ADKLDTLIGFWAIDEKPTGSKDPFALRRAALGVVRILLERRIRLPLLATTKDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHDLI+A+L + D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARHDLIDAVLTSDADDLLMVARRVEALTAFITSEDGKNLLSGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L L+AEK L+A IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALLTLDAEKELFAAISGASKDASDAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|116250725|ref|YP_766563.1| glycyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. viciae 3841] gi|229558570|sp|Q1MKQ6|SYGB_RHIL3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|115255373|emb|CAK06448.1| putative glycyl-tRNA synthetase beta chain [Rhizobium leguminosarum bv. viciae 3841] Length = 704 Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/702 (53%), Positives = 492/702 (70%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVTDVMPGIIRDFPWPKSMRWGKASSKPGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP PI V+ D Y +LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEPITVRRFDDYAANLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-VL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + G L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRPQGGETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQASDGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNKFILVSNIQASDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLTASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 D++KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL+DRA VL+K Sbjct: 361 DINKPLDQRMAKLDALDVTFHAKLGTQGARVARIRTLAKQLADITGADAALIDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YA LQ E+ S A+E+H KP+GP + VP ++++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAALQGEDASVAAALEDHYKPQGPSDRVPEDRVAITIAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTLI FWAI+EKP+GSKDP+ALRRA LG++RI+LE K+ +PL D +L+ FFH Sbjct: 481 ADKLDTLIGFWAIDEKPTGSKDPFALRRAALGVVRILLERKVRLPLLTTTRDIDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHDLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARHDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +S L L+AEK L+A IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSQALLKLDAEKELFAAISGASKDASDAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|327190722|gb|EGE57803.1| glycyl-tRNA synthetase protein, beta subunit [Rhizobium etli CNPAF512] Length = 704 Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/702 (53%), Positives = 490/702 (69%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSKSGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGIIASNITYGHRFHAPEAITVRRFDDYAASLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + EG L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRRQGEGTL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNRFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLGASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL DRA VL+K Sbjct: 361 DLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAKELAAITGADPALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YAVLQ EN S A+E+H KP+GP + VP +K++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAVLQGENASVAAAVEDHYKPQGPSDRVPEDKVAITLAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL D +L+ FFH Sbjct: 481 ADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATTRDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ R+DLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARYDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L L+AEK L++ IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALLKLDAEKELFSAISSASKDAADAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF++VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|86356536|ref|YP_468428.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli CFN 42] gi|123512853|sp|Q2KBT5|SYGB_RHIEC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|86280638|gb|ABC89701.1| glycyl-tRNA synthetase, beta subunit protein [Rhizobium etli CFN 42] Length = 704 Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/702 (53%), Positives = 484/702 (68%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL +IS+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSISEAQVVNDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSAPGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y LE A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAIMVRRFDDYAASLERAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + E L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEDTL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+ASDGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNRFILVSNIEASDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLAASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L +K+A + AD AL DRA VL+K Sbjct: 361 DLQKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAQKLAAVTGADAALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YA LQ EN S AIE+H KP+GP + VP +K++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAALQGENASVAAAIEDHYKPQGPSDRVPEDKVAITLAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE I +PL D +L+ FFH Sbjct: 481 ADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERGIRLPLLATTRDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHDLI+A+L PE D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARHDLIDAVLTPEADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L+AEK L+A IS ++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALFKLDAEKELFAAISSASKDAANAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|190890601|ref|YP_001977143.1| glycyl-tRNA synthetase, beta subunit [Rhizobium etli CIAT 652] gi|238692499|sp|B3PRI2|SYGB_RHIE6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|190695880|gb|ACE89965.1| glycyl-tRNA synthetase protein, beta subunit [Rhizobium etli CIAT 652] Length = 704 Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/702 (53%), Positives = 489/702 (69%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSKSGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAITVRRFDDYAASLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + E L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEDTL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNRFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLAASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL DRA VL+K Sbjct: 361 DLQKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAKELAAITGADPALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YAVLQ EN S A+E+H KP+GP + VP +K++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAVLQGENASVAAAVEDHYKPQGPSDRVPEDKVAITLAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL D +L+ FFH Sbjct: 481 ADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATTRDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ R+DLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARYDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L L+AEK L+A IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALLKLDAEKELFAAISSASKDAADAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF++VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|325292025|ref|YP_004277889.1| glycyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] gi|325059878|gb|ADY63569.1| glycyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] Length = 717 Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/716 (51%), Positives = 494/716 (68%), Gaps = 14/716 (1%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVERGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GPR A +KAI+GFLR GL +S+ Q+ DPKKGD Y+A++ KP R Sbjct: 61 ARSADVREEKKGPRTDANEKAIEGFLRGAGLNDVSEAQVVSDPKKGDFYIAIINKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E+++ ++P I+ PWPKSMR P + W+RPL+SI+C+ Sbjct: 121 EEIIAEVMPGIIRSFPWPKSMRSGPASMPKGSSYAGIEGKGSESLRWVRPLQSIVCLFGP 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + ++I + I GN+TYGHRFHAP PI V+ + Y+ LE+A V+LD + R++ I Sbjct: 181 EHDETQVIPFVIDGIVAGNVTYGHRFHAPGPITVRRFEDYVSSLEKAKVILDADRRKDII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA LA A GLELVED+ LLEE+ GLVEW QV MG+F++ YL +P E+IRLTIKTNQK Sbjct: 241 LHDAKDLAFANGLELVEDEGLLEEVSGLVEWPQVLMGTFEEDYLQIPAEIIRLTIKTNQK 300 Query: 289 CFVTRTR--EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 CFVTR + E L+N FIL+SNI+ASDGG I+ GN +VV ARL DA HFW RDQ +LP+ Sbjct: 301 CFVTRNQGAEEGLSNRFILISNIEASDGGKEIIHGNGKVVRARLSDARHFWNRDQGDLPD 360 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L +LK+SA KF LDL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L K +A ++ A Sbjct: 361 LETLKDSAAKFGLDLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRELAKALAAVVGA 420 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ALVDRA+VL+KADL TE V EFPELQG +G++YA LQ EN S AIE+H KP+GP + Sbjct: 421 DAALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYATLQGENESVAAAIEDHYKPQGPSD 480 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +K++ITV+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG++RI+LE + +PL Sbjct: 481 RLPADKVAITVALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRILLEKNVRLPLL 540 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 +D +L+ FFHDRLK+YL D R+DLI+A+L PE+D+LL I ++ L F + G Sbjct: 541 SVAKDTDLLSFFHDRLKVYLRDLGARYDLIDAVLTPESDDLLMIARRVEALTAFITGEDG 600 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 L AKR Q+LA EEKK ++ +S + L L+AEK LYA I ++++ + Sbjct: 601 RNLLAGAKRATQLLAAEEKKGTVVANSVSEELLKLDAEKALYAAIKTASADAAKAVETED 660 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L ++ P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 FRSAMQALSTLRAPVDKFFEDVLVNDEDAAIRANRLALLKAIREATGTVADFSKIT 716 >gi|15887985|ref|NP_353666.1| glycyl-tRNA synthetase subunit beta [Agrobacterium tumefaciens str. C58] gi|229470693|sp|A9CK39|SYGB_AGRT5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|15155593|gb|AAK86451.1| glycyl-tRNA synthetase, beta chain [Agrobacterium tumefaciens str. C58] Length = 717 Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/716 (51%), Positives = 496/716 (69%), Gaps = 14/716 (1%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVERGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GPR A +KAI+GFLR GL IS+ Q+ DPKKGD Y+A++ KP R Sbjct: 61 ARSADVREEKKGPRTDANEKAIEGFLRGAGLNDISEAQVVSDPKKGDFYIAIINKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E+++ ++P I+ PWPKSMR P + W+RPL+SI+C+ Sbjct: 121 EEIIAEVMPGIIRSFPWPKSMRSGPASMPKGSSYAGIEGKGSESLRWVRPLQSIVCLFGP 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + ++I + I GNITYGHRFHAP PI V+ + Y+ +LE+A V+LD + R++ I Sbjct: 181 EHDETQVIPFVIDGIVAGNITYGHRFHAPGPITVRRFEDYVSNLEKAKVILDADRRKDII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA LA A GLELVED+ LLEE+ GLVEW QV MG+F++ YL +P E+IRLTIKTNQK Sbjct: 241 LHDAKDLAFANGLELVEDEGLLEEVSGLVEWPQVLMGTFEEDYLQIPAEIIRLTIKTNQK 300 Query: 289 CFVTRTR--EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 CFVTR + E L+N FIL+SNI+ASDGG I+ GN +VV ARL DA HFW RDQ +LP+ Sbjct: 301 CFVTRNQGAEEGLSNRFILISNIEASDGGKEIIHGNGKVVRARLSDARHFWNRDQGDLPD 360 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L +LK+SA KF+LDL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L K +A ++ A Sbjct: 361 LETLKDSAAKFDLDLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRELAKALAPVVGA 420 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ALVDRA+VL+KADL TE V EFPELQG +G++YAVLQ EN S AIE+H KP+GP + Sbjct: 421 DGALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYAVLQGENESVAAAIEDHYKPQGPSD 480 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +K++ITV+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG++RI+LE + +PL Sbjct: 481 RLPADKVAITVALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRILLEKNVRLPLL 540 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 D +L+ FFHDRLK+YL D R+DLI+A+L PE+D+LL I ++ L F + G Sbjct: 541 SVARDSDLLSFFHDRLKVYLRDLGARYDLIDAVLTPESDDLLMIARRVEALTAFITGEDG 600 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 L AKR Q+LA EEKK ++ +S + L L+AEK LYA I ++++ + Sbjct: 601 RNLLAGAKRATQLLAAEEKKGTVVADGVSEELLKLDAEKALYAAIKTASADAAKAVEGED 660 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L ++ P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 FRSAMQALSTLRAPVDKFFEDVLVNDEDAAIRANRLALLKAIREATGTVADFSKIT 716 >gi|222085067|ref|YP_002543597.1| glycyl-tRNA synthetase [Agrobacterium radiobacter K84] gi|221722515|gb|ACM25671.1| glycyl-tRNA synthetase [Agrobacterium radiobacter K84] Length = 742 Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/741 (49%), Positives = 494/741 (66%), Gaps = 39/741 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ +R+YWTP RL L ++G++ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGVREYWTPRRLTLDIRGVT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q++ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVQSDPKKGDFYVAVISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW + + W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVADVMPWIIRDFPWPKSMRWGKASAKPGSLRWVRPLQSIVCTFGTEHEETVVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N+TYGHRFHAP PI V+ D Y+ L++A V+LD E R++ IL+DA +A A G Sbjct: 181 DGIVASNVTYGHRFHAPGPITVKRFDDYVSSLDKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR----- 295 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRRQDSHLP 300 Query: 296 ----------------------------------EGVLANCFILVSNIQASDGGAAIVQG 321 EG L+N FILVSNIQA+DGG I+ G Sbjct: 301 LNGGGRSEAAGGGDPLLQQNHPTPALRANPPPQGEGALSNRFILVSNIQATDGGKEIIHG 360 Query: 322 NSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHA 381 N +VV ARL DALHFWKRDQ +LP+L +L+ SA KF LDL KPLDQRMA+LD L+V FHA Sbjct: 361 NGKVVRARLSDALHFWKRDQGDLPDLETLEASAAKFGLDLKKPLDQRMAKLDALNVTFHA 420 Query: 382 KIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEY 441 K+G+QGERV+RIR L ++A++ AD VDRA VL+KADL TE V EFPELQG +G++Y Sbjct: 421 KLGSQGERVARIRTLAAELAKITGADPLKVDRAAVLAKADLRTEAVGEFPELQGLMGRKY 480 Query: 442 AVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKD 501 A LQ E+ S AIE+H KP+GP + VP +K++ITV+LADKLDTL+ FWAI+EKP+GSKD Sbjct: 481 AALQGEDASVAAAIEDHYKPQGPSDRVPDDKVAITVALADKLDTLMGFWAIDEKPTGSKD 540 Query: 502 PYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 PYALRRA LG++RI+LE K+ +PL +D +L+ FFHDRLK+YL D+ R+DLI+++L Sbjct: 541 PYALRRAALGVVRILLERKVRLPLLAVTKDADLLAFFHDRLKVYLRDQGARYDLIDSVLT 600 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 PE D+LL + ++ L F +S G+ L KR Q+LA EEKK ++ +S L L Sbjct: 601 PEADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQLLAAEEKKGTAVADGVSESLLTL 660 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 +AEK L+A ++ ++ + + L ++ P++ FF VLVN +D +R NR Sbjct: 661 DAEKDLFAAVTKASAEAANAIVGEDFRSAMAALSTLRAPVDRFFGDVLVNDEDAAIRANR 720 Query: 682 LSLLQYIKNIILIVINVQKIV 702 L+LL+ I+ V + KI Sbjct: 721 LALLRLIREATGTVADFSKIA 741 >gi|209548144|ref|YP_002280061.1| glycyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533900|gb|ACI53835.1| glycyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 727 Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/725 (52%), Positives = 487/725 (67%), Gaps = 24/725 (3%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSRPGAMRWVRPLQSIVCTFGPEHEETVVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N TYGHRFHAP I V+ D Y LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNTTYGHRFHAPEAITVRRFDDYAASLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + E L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ +LP+L +L SA KF L Sbjct: 301 SNKFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGDLPDLETLTASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L +++A++ AD AL DRA VL+K Sbjct: 361 DLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAEELAKITGADAALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YA LQ EN S AIE+H KP+GP + VP +K++ITV+L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAGLQGENGSVAAAIEDHYKPQGPSDRVPADKVAITVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----SQ-------- 527 ADKLDTLI FWAI EKP+GSKDP+ALRRA LG++RI+LE + +PL SQ Sbjct: 481 ADKLDTLIGFWAIGEKPTGSKDPFALRRAALGVVRILLERNVRLPLLTIMSQTSLLAKTG 540 Query: 528 ------FIEDQ-----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 F D +L+ FFHDRLK+YL D+ RHDLI+A+L + D+LL + ++ Sbjct: 541 GDTVFAFAGDPAETFFDLLSFFHDRLKVYLRDQGARHDLIDAVLTSDADDLLMVARRVEA 600 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L F +S G+ L KR Q+LA EEKK I+ +SP L L+AEK L+A IS Sbjct: 601 LTAFITSEDGKNLLAGTKRATQLLAAEEKKGTVIADAVSPALLKLDAEKELFAAISGASK 660 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +++ + + L + P++ FF+ VLVN +D +R NRL+LL+ I+ V Sbjct: 661 EAADAVASEDFRSAMAALSKLRGPVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVA 720 Query: 697 NVQKI 701 + KI Sbjct: 721 DFSKI 725 >gi|227821046|ref|YP_002825016.1| glycyl-tRNA synthetase subunit beta [Sinorhizobium fredii NGR234] gi|254781859|sp|C3MHD5|SYGB_RHISN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|227340045|gb|ACP24263.1| glycyl-tRNA synthetase beta chain [Sinorhizobium fredii NGR234] Length = 721 Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/719 (50%), Positives = 482/719 (67%), Gaps = 18/719 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR+ GL +I D + DPKKGD Y+A + KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRAAGLSSIGDAHVHSDPKKGDFYVAHIVKPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ ++P I+ PWPKSMR + + W+RPL+SI+C AE + ++I + Sbjct: 121 EDIVAEVMPAIIRDFPWPKSMRSGAASAKPGSLRWVRPLQSIVCTFGAETEETRVIPFAV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ Y LE+A V+LD E R+ I DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAIMVRRFADYADKLEKAKVVLDAERRKEIIGADARNIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-VL 299 LELVED+ LLEE+ GLVEW +V MGSF++ YL +P E+IRLTIKTNQKCFVTR L Sbjct: 241 LELVEDEGLLEEVTGLVEWPRVLMGSFEESYLEIPSEIIRLTIKTNQKCFVTRQPGAETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+A DGG IV GN +VV ARL DA HFWKRDQ +LP+L +LK SA KF L Sbjct: 301 SNRFILVSNIEAKDGGKEIVHGNGKVVRARLSDAAHFWKRDQGDLPDLETLKPSAEKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR + +A++ AD ALV+R++VL+K Sbjct: 361 DLGKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSIALALAEVTGADQALVERSVVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G +YAVLQ E+ + +AIE+H KP+GP + VPT+ +S V+L Sbjct: 421 ADLRTEAVGEFPELQGIMGHKYAVLQGEDAAVANAIEDHYKPQGPSDRVPTDAVSAAVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL FWAI+EKP+GSKDPYALRRA LG+IR+ILE + +PL F + Sbjct: 481 ADKLDTLAGFWAIDEKPTGSKDPYALRRAALGVIRLILEGRTRLPLLPFFDVALKALRTQ 540 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK+YL D R+DLI+A+L E D+LL I ++ L F + Sbjct: 541 RPDLTGDIAADLLAFFHDRLKVYLRDLGARYDLIDAVLTSEADDLLMIARRVEALTAFIT 600 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + +G+ L KR QILA EEKK E++ ++ + L+AE+ L+A I +E++ Sbjct: 601 AEEGKNLLAGTKRATQILAAEEKKGTEVADQVDERLFRLDAERTLHASIKLASDDAREAI 660 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + EP+++FF+ VLVN +DR +R NRL+LL I++ V + KI Sbjct: 661 GKEDFRSAMAALSKLREPVDVFFNDVLVNDEDRAIRANRLALLGLIRSATGEVADFSKI 719 >gi|15964608|ref|NP_384961.1| glycyl-tRNA synthetase subunit beta [Sinorhizobium meliloti 1021] gi|307309354|ref|ZP_07589017.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] gi|307320090|ref|ZP_07599511.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|81854356|sp|Q92RL2|SYGB_RHIME RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|15073786|emb|CAC45427.1| Probable glycyl-tRNA synthetase beta chain [Sinorhizobium meliloti 1021] gi|306894305|gb|EFN25070.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|306900223|gb|EFN30841.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] Length = 721 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/719 (50%), Positives = 479/719 (66%), Gaps = 18/719 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR+ A +KAI+GFLR+ GL ++S+ + DPKKGD Y+A + KP R Sbjct: 61 ARSADLREERKGPRIDANEKAIEGFLRAAGLSSLSEAHVHNDPKKGDFYVAHIVKPGREA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMR + + W+RPL+SI+C AE + K+I ++ Sbjct: 121 EEIIADVMPAIIRDFPWPKSMRSGAASAKPGSLRWVRPLQSIVCTFGAEHDETKVIPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ Y LE+A V++D E R+ I DAH +A A G Sbjct: 181 DGIVASNITYGHRFHAPEAITVRRFADYAEKLEKAKVVIDAERRKEIISADAHNVAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-VL 299 LELVED+ LLEE+ GLVEW +V MGSF++ YL +P E+IRLTIKTNQKCFVTR L Sbjct: 241 LELVEDEGLLEEVAGLVEWPRVLMGSFEESYLEIPSEIIRLTIKTNQKCFVTRKPGAETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+A DGG I GN +VV ARL DA HFWKRDQ++LP+L +L SA KF L Sbjct: 301 SNRFILVSNIEAKDGGKEIAHGNGKVVRARLSDAAHFWKRDQSDLPDLETLTASAEKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L +A+L AD A VDRA+VL+K Sbjct: 361 DLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSLAAALARLTGADAASVDRAVVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G +YAVLQ E + DAIE+H KP+GP + VPT+ +S TV+L Sbjct: 421 ADLRTEAVGEFPELQGIMGHKYAVLQGEAAAVADAIEDHYKPQGPSDRVPTDPVSATVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+ILE +PL + Sbjct: 481 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLILEGSARLPLLPCFDVALAALKAQ 540 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK+YL D R+DLI+A+L P+ D+LL I ++ L F + Sbjct: 541 RPDIRAEISADLLAFFHDRLKVYLRDLGARYDLIDAVLAPDADDLLMIARRVEALTAFIT 600 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + +G L KR QILA EEKK E++ + L+AE+ L+A I ++++ Sbjct: 601 AEEGRNLLTGTKRATQILAAEEKKGTEVAESVDEALFRLDAERTLHASIKVASDDARDAI 660 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + P++ FF+ VLVN +D+ +R NRL+LL I++ V + KI Sbjct: 661 VKEDFRSAMQALSKLRAPVDDFFNDVLVNDEDKAIRANRLALLGLIRSATGEVADFSKI 719 >gi|150395691|ref|YP_001326158.1| glycyl-tRNA synthetase subunit beta [Sinorhizobium medicae WSM419] gi|229558576|sp|A6U6P3|SYGB_SINMW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|150027206|gb|ABR59323.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium medicae WSM419] Length = 721 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/719 (50%), Positives = 480/719 (66%), Gaps = 18/719 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR+ A KAI+GFLR+ GL +IS+ + DPKKGD Y+A + + R Sbjct: 61 ARSADMREERKGPRIDANDKAIEGFLRAAGLSSISEAHVHNDPKKGDFYVAHIVRRGREA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMR + + W+RPL+SI+C AE + K+I ++ Sbjct: 121 EEIVADVMPAIIRDFPWPKSMRSGAASAIPGSLRWVRPLQSIVCTFGAEHDETKVIPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ Y L +A V++D E R+ I DAH +A A G Sbjct: 181 DGIVASNITYGHRFHAPEAIAVRRFADYAEKLGKAKVVIDAERRKEIISADAHNIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-VL 299 LELVED+ LLEE+ GLVEW +V MGSF++ YL +P E+IRLTIKTNQKCFVTR L Sbjct: 241 LELVEDEGLLEEVAGLVEWPKVLMGSFEESYLAIPSEIIRLTIKTNQKCFVTRKPGAETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+A DGG IV GN +VV ARL DA HFWKRDQ +LP+L +L SA KF L Sbjct: 301 SNRFILVSNIEAKDGGKEIVHGNGKVVRARLSDAAHFWKRDQGDLPDLETLAASAGKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L +A++ AD A V RA VL+K Sbjct: 361 DLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSLAAALAKITGADPASVARAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G +YAVLQ E+ + +AIE+H KP+GP ++VPT+ +S++V+L Sbjct: 421 ADLRTEAVGEFPELQGIMGHKYAVLQGESAAVANAIEDHYKPQGPSDHVPTDPVSVSVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+E+P+GSKDPYALRRA LG+IR+ILE + +PL + Sbjct: 481 ADKLDTLVGFWAIDERPTGSKDPYALRRAALGVIRLILEGRARLPLLPCFDVALASLKLQ 540 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK+YL D RHDLI+A+L P+ D+LL I ++ L F + Sbjct: 541 RPAMAADVSGDLLAFFHDRLKVYLRDLGARHDLIDAVLAPDADDLLMIARRVEALTAFIT 600 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + +G L KR QILA EEKK E++ + + L+AE+ LYA I + ++ Sbjct: 601 AEEGRNLLAGTKRATQILAAEEKKGTEVAASVDEELFRLDAERLLYASIKVASDGARAAI 660 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + EP++ FF+ VLVN +D+ +R NRL+LL I++ V + KI Sbjct: 661 AKEDFRSAMEALSKLREPVDAFFNDVLVNDEDKAIRANRLALLGLIRSATGEVADFSKI 719 >gi|222147719|ref|YP_002548676.1| glycyl-tRNA synthetase subunit beta [Agrobacterium vitis S4] gi|221734707|gb|ACM35670.1| glycyl-tRNA synthetase beta chain [Agrobacterium vitis S4] Length = 764 Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/763 (48%), Positives = 485/763 (63%), Gaps = 61/763 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L + G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVDAGLTYEGAREYWTPRRLVLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GP V A +KAI+GFLR GL +I +K DPKKGD Y+A++ KP R Sbjct: 61 ARSADVKEEKKGPSVSAPEKAIEGFLRGAGLASIDQAVVKTDPKKGDFYVAMIDKPGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E+++ +P I+ PWPKSMR P + W+RPL+SILC + Sbjct: 121 EEIITEAMPGIIRSFPWPKSMRSGAASMPKGSRYGGIEGKGSESLRWVRPLQSILCTFGS 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + II D+ I NITYGHRFHAP I V+ D Y+ LE+A V+LD E R++ I Sbjct: 181 EHDEVAIIPFDIDGITASNITYGHRFHAPEAITVRRFDDYVSSLEKAKVILDAERRKDII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA +A A GL+LVED+ LLEE+ GLVE+ QV +G+F+ YL +P E+IRLTIKTNQK Sbjct: 241 LHDARDVAFANGLDLVEDEGLLEEVSGLVEYPQVLLGTFEADYLSIPSEIIRLTIKTNQK 300 Query: 289 CFVTR--TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 CFVTR L+N FIL+SNI A DGGA I+ GN +VV ARL DALHFWKRDQ NLP+ Sbjct: 301 CFVTRPIGESEKLSNHFILISNIAAHDGGAEIIHGNGKVVRARLSDALHFWKRDQGNLPD 360 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L +L+ SA KF LDL KPLDQRMA+LD L+V FHAK+G+QGERV+RIR L K +A ++ A Sbjct: 361 LETLEASAAKFGLDLKKPLDQRMAKLDALNVTFHAKLGSQGERVARIRDLAKVLAPVVGA 420 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ALVDRA+VL+KADL TE V EFPELQG +G++YA LQ E+ S AIE+H KP+GP + Sbjct: 421 DEALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYATLQGEHESVAAAIEDHYKPQGPSD 480 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL- 525 +P +K++ITV+LADKLDTL+ FWAINEKP+GSKDP+ALRRA LG +RI+LE I + L Sbjct: 481 RLPEDKVAITVALADKLDTLVWFWAINEKPTGSKDPFALRRAALGDVRILLEKNIRLSLL 540 Query: 526 -------------SQFIE---------------------------------DQNLILFFH 539 S+ IE +L+ FFH Sbjct: 541 DVFAHSLLGRSLTSEEIERIIDAAIYESVAGGAPKDSTSSKYSQEFASVFLGGSLLSFFH 600 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHD+I+A+L PE D+LL + + L F +S G+ L KR Q+ Sbjct: 601 DRLKVYLRDQGARHDIIDAVLTPEADDLLMVARRAEALTAFITSEDGKNLLAGTKRATQL 660 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK ++ +S L L+AEK LYA I E++ + + L ++ Sbjct: 661 LAAEEKKGTVVADGVSEALLTLDAEKALYAAIVQATQSAAEAVAKEDFRSAMQALSTLRA 720 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 721 PVDTFFEDVLVNDEDAAIRANRLALLKAIREATGTVADFSKIA 763 >gi|319784744|ref|YP_004144220.1| glycyl-tRNA synthetase subunit beta [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170632|gb|ADV14170.1| glycyl-tRNA synthetase, beta subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 706 Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/705 (49%), Positives = 473/705 (67%), Gaps = 3/705 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL +L L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLRKMLTDSLVEAGLTYEAAREYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GFLR GL +I++ + DPKKGD Y+A + KP R Sbjct: 61 ARSKDINEEIKGPSTSAPEQAVQGFLRKAGLSSIAEAHVHSDPKKGDFYVAHISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ +VP I+ PWPKSMRW + + + W+RPL+SILC E + +ID ++ Sbjct: 121 EQIIAELVPGIIRNFPWPKSMRWGPSSAKPGSLRWVRPLQSILCTFGPETEEPVVIDFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GNITYGHRFHAP I V+ D Y+ LE A V+LD + R+ IL DA LA A G Sbjct: 181 DGIRSGNITYGHRFHAPDAITVRRFDDYVSKLEAAKVVLDADRRKEIILADARNLAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EGV 298 L+LVED+ LLEE+ GLVEW V MG F++ +L +P E+IRLTI+ NQKCFVTR + + Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGEFEEAFLAIPAEVIRLTIRANQKCFVTRPQGVDDA 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FIL +NI+A DGG I GN +VV ARL DAL+FW DQ +LP+L+ L+ SA KF Sbjct: 301 LSNRFILTANIEARDGGKEIAHGNGKVVRARLSDALYFWTTDQGDLPDLAELEASAEKFG 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL KPLDQRMARLD L V FHAK+GTQGERV RI+ L +++A ++ AD AL RA VL+ Sbjct: 361 LDLKKPLDQRMARLDHLGVTFHAKLGTQGERVERIKRLAEELAPIVGADPALARRAAVLA 420 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ S A EEH KP+GP + V ++ +SITV+ Sbjct: 421 KADLTTEVVGEFPELQGAMGRKYALLQGEHASVAAAAEEHYKPQGPSDRVSSDPVSITVA 480 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-EDQNLILF 537 LADKLD L+ FWAI+EKP+GSKDPYALRRA LG++RI++EN I + L+ + + +L+ F Sbjct: 481 LADKLDMLVGFWAIDEKPTGSKDPYALRRAALGVVRILVENDIRLALAAIVGKASDLLSF 540 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 FHDRLK+YL D+ RHDLI+A++ P++D+LL IV ++ L F + G+ L KR Sbjct: 541 FHDRLKVYLRDQGARHDLIDAVITPQSDDLLQIVRRVEALGAFLDTEDGKNLLAGTKRAA 600 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 ILA EEKK ++ + P + EK L+A ++ E++ + + L + Sbjct: 601 NILAAEEKKKTAVAETVEPALFRADTEKSLFAAVNQAEKQAGEAIQNDDFSGALLALSVL 660 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 EP++ FF+ VLVN +D+ VR NRL+LL I+ V + +I Sbjct: 661 REPVDSFFEHVLVNDEDQAVRANRLALLARIRAATGQVADFSRIA 705 >gi|13476182|ref|NP_107752.1| glycyl-tRNA synthetase subunit beta [Mesorhizobium loti MAFF303099] gi|25009337|sp|Q986B5|SYGB_RHILO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|14026942|dbj|BAB53538.1| glycyl-tRNA synthetase, beta chain [Mesorhizobium loti MAFF303099] Length = 718 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/717 (49%), Positives = 477/717 (66%), Gaps = 15/717 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL +L L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKMLTDGLVEAGLTYEAAREYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GFLR GL +++D + DPKKGD Y+A + KP R Sbjct: 61 ARSKDIREEIKGPSTTAPEQAVQGFLRKAGLSSVADAHVHSDPKKGDFYVAHISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + + W+RPL+S+LC E + ++D ++ Sbjct: 121 EEIIAQLVPGIIRNFPWPKSMRWGPASAKPGSLRWVRPLQSVLCTFGPETEEPVVVDFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GNITYGHRF AP I V+ D Y+ LE A V+LD + R+ IL DA LA A G Sbjct: 181 DGIRSGNITYGHRFLAPGEITVRRFDDYVSKLEAAKVVLDADRRKEIILADARNLAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EG-V 298 L+LVED+ LLEE+ GLVEW V MG F++ +L +P E+IRLTI+ NQKCFVTR + EG Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGEFEEAFLAIPAEVIRLTIRANQKCFVTRPQGEGEA 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FIL SNI+A DGG I GN +VV ARL DAL+FW DQ +LP+L L+ SA KF Sbjct: 301 LSNRFILTSNIEARDGGKEIAHGNGKVVRARLSDALYFWTTDQGDLPDLGQLEASAEKFG 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL+KPLDQRMARLD L+V FHAK+GTQGERV RIR L +++A + AD L RA VL+ Sbjct: 361 LDLNKPLDQRMARLDHLNVTFHAKLGTQGERVERIRRLAEELAPTVGADPVLAARAAVLA 420 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ S AIEEH KP+GP + VP++ +S+ V+ Sbjct: 421 KADLQTEVVGEFPELQGAMGRKYALLQGEHPSVAAAIEEHYKPQGPSDYVPSDPVSVAVA 480 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG++RI++E++I + LS Sbjct: 481 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVVRILVEDRIQLRLSSIFASAGACYAG 540 Query: 530 ----EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + ++L+ FFHDRLK+YL D+ RHDLI+A++ P++D+LL IV ++ L F + Sbjct: 541 SGADQTRDLLAFFHDRLKVYLRDQGARHDLIDAVITPQSDDLLQIVRRVEALGSFLDTED 600 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L KR ILA EEKK ++ + P AEK L+A ++ E++ ++ Sbjct: 601 GKNLLAGTKRAANILAAEEKKKTAVAKTVEPALFKENAEKSLFAAVNQAEKQAGEAIQNE 660 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L ++ EP++ FF+ VLVN +D EVR NRL+LL I+ V + KI Sbjct: 661 DFSAAMLALSALREPVDSFFEGVLVNDEDLEVRANRLALLTRIRAATGQVADFSKIA 717 >gi|110633071|ref|YP_673279.1| glycyl-tRNA synthetase subunit beta [Mesorhizobium sp. BNC1] gi|110284055|gb|ABG62114.1| glycyl-tRNA synthetase beta chain [Chelativorans sp. BNC1] Length = 789 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/760 (46%), Positives = 476/760 (62%), Gaps = 58/760 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ +YWTP RL L ++G++ Sbjct: 29 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDGLVEAGLTYEAATEYWTPRRLALDIRGVT 88 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++AI GFLR GL I+ + DPKKG Y+AV+ K R Sbjct: 89 ARSRDVREEIKGPSTSAPEQAIQGFLRKAGLTDIAQAHVHTDPKKGGFYVAVIEKNGRPA 148 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW + W+RPL+SI+C E + ++D ++ Sbjct: 149 EEIIAELMPAVIRNFPWPKSMRWGKASRNPGSLRWVRPLQSIVCTFGPETEEPVVVDFEI 208 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+TYGHRFHAP I V+ D Y+ LE+A V+LD E R+ IL+DA LA A G Sbjct: 209 DGIRAGNVTYGHRFHAPEAITVRRFDDYVEKLEQAKVVLDAERRKRIILDDAKNLAFANG 268 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-- 298 LELVED+ LLEE+ GLVE+ V MG F++ YL +P E++RLTI+ NQKCFVTR + + Sbjct: 269 LELVEDEGLLEEVSGLVEYPVVLMGEFEEAYLEIPAEVVRLTIRANQKCFVTRPQGELEK 328 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FI+ +NI+A+DGG I GN +VV ARL DAL+FWK DQ +LP++ LK SA KF Sbjct: 329 LSNRFIITANIEATDGGKEIAYGNGKVVRARLSDALYFWKTDQADLPDIDRLKGSAEKFG 388 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL+KPLDQRMARL+ L+V FHAK+GTQGERV RIR L +++A ++ AD L +RA VL+ Sbjct: 389 LDLNKPLDQRMARLEHLNVTFHAKLGTQGERVERIRRLARELAPIVGADPDLAERAAVLA 448 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA LQ E+ S A+EEH KP GP + VPT+ +S+ V+ Sbjct: 449 KADLTTEVVGEFPELQGAMGRKYAELQGEHPSVARALEEHYKPLGPSDIVPTDPVSVAVA 508 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRI++EN + + L + Sbjct: 509 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIVVENGVRLALLKAFRKARNVSAE 568 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAIL---RP------------------------ 562 ++L+ FFHDRLK+YL D+ RHDLI+A+L RP Sbjct: 569 NTEDLLSFFHDRLKVYLRDQGARHDLIDAVLASGRPISPLEGEMSPKATEGGAVPPTSQS 628 Query: 563 --------------------ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 ND+LL IV ++ L++ + G+ L KR ILA Sbjct: 629 VTPPSALPGISPSRGEITPSSNDDLLLIVRRVEALSDLLGTETGQNLLAGTKRAANILAA 688 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EEKK I+ + P L E E RL++ ++ E++ + + L ++ EPI+ Sbjct: 689 EEKKGTRIAEAVDPALLKEEQEIRLFSAVNQAEKEAGEAIQKQDFSAAMTALAALREPID 748 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 FF++VLVN ++ +R NRL+LLQ I+ V + KI Sbjct: 749 SFFEKVLVNDENDSIRANRLALLQRIREATGRVADFSKIA 788 >gi|90420145|ref|ZP_01228053.1| glycyl-tRNA synthetase, beta chain [Aurantimonas manganoxydans SI85-9A1] gi|90335479|gb|EAS49229.1| glycyl-tRNA synthetase, beta chain [Aurantimonas manganoxydans SI85-9A1] Length = 724 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/722 (47%), Positives = 460/722 (63%), Gaps = 21/722 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++G+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLRKLVTDALVEAGLTYEGCREYWTPRRLTLDVRGVD 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + ++ER GPR A +KAI GFLR GL +I + I+ DPKKGD Y+A +RKP R Sbjct: 61 ARSRDVVDERKGPRTDAPEKAIQGFLRGAGLASIDEATIQSDPKKGDFYVATIRKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P ++ PWPKSMRW + W+RPL+SILC E + ++D ++ Sbjct: 121 EEIIAEVMPGIVRGFPWPKSMRWGPASREPGSLRWVRPLQSILCTFGPETEEPVVVDFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+T GHRFHA +V+ D Y+ LE+A V+LD E R++ I +DA LA A G Sbjct: 181 DGIRAGNVTRGHRFHAAEEFRVRRFDDYVAGLEKAFVVLDAERRKDMIRHDAENLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EGV 298 LE+V D+ LLEE+ GLVEW MG F++ +L +P E+I+LTIK NQKCFVTR + +G Sbjct: 241 LEVVPDEALLEEVSGLVEWPVTLMGEFEETFLQIPPEVIQLTIKVNQKCFVTRRQGGDGT 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N F+LVSNI ASDGGA I +GN +VV ARL DAL+FW+ DQ +LP +L +A KF Sbjct: 301 LSNQFVLVSNIAASDGGAEIARGNGKVVRARLSDALYFWQTDQADLPGRDALAPAAEKFR 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--------- 409 LDL+KPLDQRMA+LD L V FHA++GTQGERV RI L ++IA + D A Sbjct: 361 LDLAKPLDQRMAKLDALGVTFHARLGTQGERVGRIAALAREIAATVYPDGATLGGASVSA 420 Query: 410 -----LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 LV RA VL+KADL TE V EFPELQG +G+ YA LQ E+ S A+EEH KP GP Sbjct: 421 DELKPLVTRAAVLAKADLTTEAVGEFPELQGLMGRYYAALQGEHPSVQAALEEHYKPLGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 ++VPT+ ++I V+LADKLD L+ FWAI+EKP+GSKDPYALRRA LG+IR++L+N++ + Sbjct: 481 TDSVPTDPVAICVALADKLDMLVGFWAIDEKPTGSKDPYALRRAALGVIRLVLDNELVMA 540 Query: 525 LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPENDNLLTIVDLIKHLNE 579 L F+ +L+ FFHDRLK+ L + RHDL++A+L D+LL + + L Sbjct: 541 LGGFMPASDLLAFFHDRLKVQLRESGARHDLVDAVLSGGSGGDRGDDLLDVTRRVTALGA 600 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + G+ L +R ILA EEKK ++ +S L EK L I + Sbjct: 601 FLDTEDGQNLLAGTRRAANILAAEEKKGTRVADAVSLDLLSEHEEKVLAGAIDRAEIELD 660 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + Y L + P++ FF+ VLVN +D VR NRL+LL I+ V + Sbjct: 661 AALAVENYAHAMTALAELRIPVDAFFETVLVNAEDEAVRANRLALLDRIRAATRRVADFS 720 Query: 700 KI 701 +I Sbjct: 721 RI 722 >gi|114705267|ref|ZP_01438175.1| glycyl-tRNA synthetase beta subunit [Fulvimarina pelagi HTCC2506] gi|114540052|gb|EAU43172.1| glycyl-tRNA synthetase beta subunit [Fulvimarina pelagi HTCC2506] Length = 759 Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/757 (46%), Positives = 461/757 (60%), Gaps = 56/757 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++G+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDVRGVD 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPR A +KAI GFLR GL +I + + + DPKKGD Y+AV+RKP R Sbjct: 61 ASSKNVNEERKGPRTDAPEKAIQGFLRGAGLSSIEEAETRSDPKKGDFYVAVIRKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ ++P I+ PWPKSMRW + W+RPL+SILC E + ++D ++ Sbjct: 121 EQIIAEVMPGIIRNFPWPKSMRWGPASREPGSMRWVRPLQSILCTFGPETEEPVVVDFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRFHAP V+ D Y+ LE+A V+LD E R+ I DA A A+G Sbjct: 181 SGIRSGNTTVGHRFHAPESFMVRRFDDYVDKLEKAHVILDAERRKEMIRTDAENRAFALG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR------- 293 LE+V D+ LLEE+ GLVEW V MGSFD+ +L +P E+I+LTIK NQKCFVTR Sbjct: 241 LEVVPDEGLLEEVSGLVEWPVVLMGSFDEAFLAIPPEVIQLTIKVNQKCFVTRPVGSEPQ 300 Query: 294 -------------------TREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAAR 329 + GV L+N F+L+SNI+ASDGG I +GN +VV AR Sbjct: 301 ARKAERPSPGQGAPAEPSAQQTGVSENNRLSNHFVLISNIEASDGGEEIARGNGKVVRAR 360 Query: 330 LEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGER 389 L DAL+FWK DQ +LP+L SL+ SA KF LDL+KPLDQRMA+LD V FHAK+GTQGER Sbjct: 361 LSDALYFWKTDQADLPDLKSLEPSAEKFGLDLTKPLDQRMAKLDAQGVTFHAKLGTQGER 420 Query: 390 VSRI-------------RVLGKKIAQLIDADVA-----LVDRAIVLSKADLCTEIVREFP 431 V RI +V G +A DA A V RA VLSKADL TE V EFP Sbjct: 421 VQRIAALAEAIAGEIAAQVTGNGVATSEDAFAAGELRSTVRRAAVLSKADLPTEAVGEFP 480 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 ELQG +G+ YA LQ E+ S AIEEH KP GP + VP + ++I V+LADKLD L+ FWA Sbjct: 481 ELQGLMGRYYAKLQGEHPSVQAAIEEHYKPLGPGDQVPRDPVAICVALADKLDMLVGFWA 540 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDI 551 I+EKP+GSKDPYALRRA LG+IRI+++N++ + F +L+ FFHDRL + L D Sbjct: 541 IDEKPTGSKDPYALRRAALGVIRILVDNRLVLKFGNFDVSSDLLAFFHDRLMVQLRDSGA 600 Query: 552 RHDLIEAIL----RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN 607 RHDL++A+L ND+LL I ++ L +F + G+ L +R ILA EEKK Sbjct: 601 RHDLVDAVLSGSGEQSNDDLLDITRRVEALGQFLGAEDGQNLLAGYRRAANILAAEEKKG 660 Query: 608 REISLEISPQYLLLEA---EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 I+ + ++ + EK L I + E+++ + Y Q L + P++ F Sbjct: 661 TTIAASVDADWIAAKGEHEEKVLAGAIDRAEIEVAEALETRDYGQAMAGLSKLRAPVDSF 720 Query: 665 FDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FDKVLVNAEDETVRANRLALLARIRAACEKVADFSKI 757 >gi|239831279|ref|ZP_04679608.1| glycyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] gi|239823546|gb|EEQ95114.1| glycyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] Length = 765 Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/764 (46%), Positives = 461/764 (60%), Gaps = 63/764 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L E G+ Y+ YWTP RL L ++GL+ Sbjct: 2 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVEAGLTYEAATAYWTPRRLALDIRGLT 61 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 62 VRSKDVHEDIKGPSVTAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 121 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + + W+RPL+SILC E + +ID D+ Sbjct: 122 EEIVAELVPHTIRNFPWPKSMRWGAASAKPGSLRWVRPLQSILCTFGPETEETVVIDFDV 181 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 182 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 241 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED+ LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 242 GLELVEDEGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGET 300 Query: 298 -VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L+N FILVSNI A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA K Sbjct: 301 EALSNKFILVSNIAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAQK 360 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 F LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA V Sbjct: 361 FGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVSADPKLATRAAV 420 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TE+V EFPELQG +G++YA+LQ E + AIEEH KP+GP + VP N +S+ Sbjct: 421 LAKADLQTEVVGEFPELQGAMGRKYALLQGEGETVAAAIEEHYKPQGPSDVVPKNPVSVA 480 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFI-- 529 V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL S F Sbjct: 481 VALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAAL 540 Query: 530 ---EDQNLILFFHDRLKL----------------------------------------YL 546 + Q + F RL +L Sbjct: 541 KEGQVQRKLREFEARLAAENSGDVDGEQDVDNALASYEKLARAEAEASSEPVLGDLLSFL 600 Query: 547 HDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 HDR R+D I+A+L PE DNLL + ++ L F + G+ L KR Sbjct: 601 HDRFKVHLKDEGARYDAIDAVLSPEADNLLLVARRLEALIVFINEEDGKNLLAGTKRAAN 660 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 ILA EEKK +++ + P L EK L+ +S + ++ + ++ L + Sbjct: 661 ILAAEEKKGTKVADHVDPALLREAEEKALFEAVSLASKDAEAAIAREDFNGAMLALAKLR 720 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 P++ FF++VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 GPVDTFFEKVLVNDEDENVRANRLALLDQIRAATGKVADFSKIA 764 >gi|163761029|ref|ZP_02168107.1| glycyl-tRNA synthetase subunit beta [Hoeflea phototrophica DFL-43] gi|162281810|gb|EDQ32103.1| glycyl-tRNA synthetase subunit beta [Hoeflea phototrophica DFL-43] Length = 788 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/786 (44%), Positives = 462/786 (58%), Gaps = 85/786 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL + L + G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLRKSVTDALVDAGLTYEAAREYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GF+R GL IS+ + DPKKGD Y+A + +P R Sbjct: 61 ARSKDVHEEIKGPSTKAPEQALAGFMRKAGLNDISEAHVHTDPKKGDFYVAHISRPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E ++ ++P I+ WPKSMRW P + W+RPL+SI+C Sbjct: 121 EVIIADVMPGIIRGFSWPKSMRWGAASMPKGSSYHGIEGKGSESLKWVRPLQSIICTFGP 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + +I ++ + GN T GHRFHAP P V+ D Y LE A V+LD E R+ I Sbjct: 181 ETEEPTVIAFEIDGLVAGNTTSGHRFHAPDPFTVRRFDDYADKLERARVVLDAERRKEII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA LA A GLELVED+ LL+E+ GLVEW V MG F++ +L +P+++IRLTIKTNQK Sbjct: 241 LSDARNLAFASGLELVEDEGLLDEVSGLVEWPVVLMGEFEEDFLAIPDDIIRLTIKTNQK 300 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 CFV R L+N FILVSNI+ASD G I GN +VV ARL DAL+FW DQ +LP+L Sbjct: 301 CFVLRRPGRGLSNKFILVSNIEASDAGKEIAYGNGKVVRARLSDALYFWNTDQADLPDLE 360 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L SA K LD+SKPLDQRMARLD L V FHAK+GTQGERV RI L ++A ++ AD Sbjct: 361 KLTASAEKLGLDMSKPLDQRMARLDQLGVTFHAKLGTQGERVQRIAKLAAELAPIVGADP 420 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +L+KADL TE+V EFPELQG +G+ YA LQNEN S A EEH KP+GP + V Sbjct: 421 EHATRAAMLAKADLTTEVVGEFPELQGVMGRIYAGLQNENASVALAAEEHYKPQGPSDQV 480 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATL------------------ 510 PT+ +SI V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA L Sbjct: 481 PTDPVSIAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRILVENGVDLRVVTS 540 Query: 511 -------------------------GIIRII-----LENKIDIPLS---QFIED------ 531 G+ +II LE+K +P QF +D Sbjct: 541 SGETASLLRFIGTSVADHLVGLQMRGLAKIIADLEKLESKGALPSGYRDQFAKDMVSRKA 600 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +L+ FFHDRLK+YL D+ RHDLI+A++ P++D+LL I + Sbjct: 601 AENFINETADLSWAAASDLLSFFHDRLKVYLRDQGARHDLIDAVITPQSDDLLDITRRVA 660 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L F + G+ L KR ILA EEKK ++ I P L+AE+ L+ ++ Sbjct: 661 ALGAFLDTDDGKNLLAGTKRGANILAAEEKKGTAVAETIDPALFELDAERNLFNAVTQSV 720 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + ++++ Y L ++ EP++ FF+ VLVN DD VR NRL+LL I++ V Sbjct: 721 SAAIQVIENEDYAAAMSALATLREPVDSFFEAVLVNADDEAVRANRLALLAMIRHATGAV 780 Query: 696 INVQKI 701 + +I Sbjct: 781 ADFSRI 786 >gi|254701212|ref|ZP_05163040.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261751750|ref|ZP_05995459.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261741503|gb|EEY29429.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] Length = 777 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/777 (45%), Positives = 464/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ IL DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIILQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|49473963|ref|YP_032005.1| glycyl-tRNA synthetase subunit beta [Bartonella quintana str. Toulouse] gi|49239466|emb|CAF25817.1| Glycyl-tRNA synthetase beta chain [Bartonella quintana str. Toulouse] Length = 740 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/740 (46%), Positives = 469/740 (63%), Gaps = 39/740 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL +I L G+ Y+ R+YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKCVIDQLVNAGLTYKAAREYWTPRRLTLDVRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + IDGFLR+TGL IS+ I DPKKGD Y+A + K R Sbjct: 61 IRSKDIHEERRGPSTKSPQHVIDGFLRTTGLNNISEAPIVHDPKKGDFYIAKIIKKGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW + A WIRPL++ILC+ E + ++I + Sbjct: 121 EEIIADILPGIIRNFPWPKSMRWGKDSAKSGALKWIRPLQNILCVFGPEIGETRVIPFTI 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P++++ D YI LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSNGKPLQIRRFDDYITQLEAHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDSALLEEVAGLVEWPVVLMGNFDKSFLDIPPEIIRLTIQANQKCFVTR-KQGEK 299 Query: 298 -VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L++ FILVSNI ASD G I +GNS+VV ARL DAL+FW+ DQ++LP++ L+ SA K Sbjct: 300 IKLSHNFILVSNILASDEGKEISKGNSKVVCARLSDALYFWQTDQHDLPDIKYLQSSAKK 359 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 LDL KPLDQRMARLD L+V FH K+GTQG RV RI L +KIA + AD L RA + Sbjct: 360 LALDLKKPLDQRMARLDHLNVTFHEKLGTQGARVERIATLAQKIAPSVQADPLLAKRAAI 419 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TE+V EFPELQG +G++YA+LQ E+ +AIE+H KP+GP + +P ++I Sbjct: 420 LAKADLQTEVVGEFPELQGFMGRKYALLQEEDPRVAEAIEDHYKPQGPKDRIPQEPLAIA 479 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL------------------- 517 V+LADK+D L+ FW INEKP+GSKDPYALRRA LGIIR++L Sbjct: 480 VALADKIDMLVGFWLINEKPTGSKDPYALRRAALGIIRLVLLRDWKINLMPLFHLATNLF 539 Query: 518 ---ENKIDIPLSQFIEDQNLIL------------FFHDRLKLYLHDRDIRHDLIEAILRP 562 +NK + ++ + QNL+L FFH+RLK+YL + +R+D +EA+L Sbjct: 540 LQQKNKDETSRTKTTQSQNLVLEKTEYILSDLLFFFHERLKIYLKEEGVRYDALEAVLNK 599 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 + D+ L + ++ L F +++ G FL + KRI IL E +K I EI+P+ Sbjct: 600 DADDFLLVARRVEALIAFINTSDGGSFLAAVKRIVNILENEIQKGSTIVNEINPELFSET 659 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 EK+LY VI + +++ ++ + + L + + I+ FF++VLVN + +R NRL Sbjct: 660 EEKQLYQVIIEAEKKVRDHINAINLSRALNTLAPLRKFIDAFFEKVLVNDKNPNIRTNRL 719 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL+ I N V + K+V Sbjct: 720 ALLKRIHNTTQAVADFSKLV 739 >gi|256159111|ref|ZP_05456932.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|256254450|ref|ZP_05459986.1| glycyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|265997583|ref|ZP_06110140.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|262552051|gb|EEZ08041.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] Length = 777 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/777 (45%), Positives = 464/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLVLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|260168178|ref|ZP_05754989.1| glycyl-tRNA synthetase subunit beta [Brucella sp. F5/99] Length = 777 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/777 (45%), Positives = 464/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGGVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|225626913|ref|ZP_03784952.1| glycyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] gi|225618570|gb|EEH15613.1| glycyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] Length = 780 Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/777 (45%), Positives = 464/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ Sbjct: 4 MPDLLLELFSEEIPARMQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLALDIRGLT 63 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 64 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 123 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 124 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 183 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 184 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 243 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 244 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 302 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 303 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 362 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 363 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 422 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 423 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 482 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 483 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 542 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 543 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGGVDGEQDVDNALANYEKEIRAEAEA 602 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 603 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 662 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 663 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 722 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 723 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 779 >gi|163842686|ref|YP_001627090.1| glycyl-tRNA synthetase subunit beta [Brucella suis ATCC 23445] gi|163673409|gb|ABY37520.1| glycyl-tRNA synthetase, beta subunit [Brucella suis ATCC 23445] Length = 777 Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust. Identities = 350/777 (45%), Positives = 463/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|256368860|ref|YP_003106366.1| glycyl-tRNA synthetase, beta subunit [Brucella microti CCM 4915] gi|255999018|gb|ACU47417.1| glycyl-tRNA synthetase, beta subunit [Brucella microti CCM 4915] Length = 777 Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust. Identities = 350/777 (45%), Positives = 463/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDMHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|225851940|ref|YP_002732173.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis ATCC 23457] gi|254693188|ref|ZP_05155016.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|254707863|ref|ZP_05169691.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|254709553|ref|ZP_05171364.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|254716617|ref|ZP_05178428.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|256031047|ref|ZP_05444661.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|256044124|ref|ZP_05447031.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|256060541|ref|ZP_05450709.1| glycyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261213429|ref|ZP_05927710.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|261218417|ref|ZP_05932698.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261315353|ref|ZP_05954550.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|261317081|ref|ZP_05956278.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|261324535|ref|ZP_05963732.1| glycyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|265988118|ref|ZP_06100675.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|225640305|gb|ACO00219.1| glycyl-tRNA synthetase, beta subunit [Brucella melitensis ATCC 23457] gi|260915036|gb|EEX81897.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|260923506|gb|EEX90074.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261296304|gb|EEX99800.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|261300515|gb|EEY04012.1| glycyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261304379|gb|EEY07876.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|264660315|gb|EEZ30576.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] Length = 777 Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust. Identities = 350/777 (45%), Positives = 463/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|17987812|ref|NP_540446.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|17983538|gb|AAL52710.1| glycyl-tRNA synthetase beta chain [Brucella melitensis bv. 1 str. 16M] Length = 780 Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust. Identities = 350/777 (45%), Positives = 463/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 4 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 63 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 64 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 123 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 124 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 183 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 184 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 243 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 244 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 302 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 303 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 362 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 363 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 422 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 423 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 482 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 483 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 542 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 543 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEA 602 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 603 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 662 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 663 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 722 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 723 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 779 >gi|148560042|ref|YP_001258428.1| glycyl-tRNA synthetase subunit beta [Brucella ovis ATCC 25840] gi|148371299|gb|ABQ61278.1| glycyl-tRNA synthetase, beta subunit [Brucella ovis ATCC 25840] Length = 777 Score = 635 bits (1638), Expect = e-180, Method: Compositional matrix adjust. Identities = 349/777 (44%), Positives = 462/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPY LRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYVLRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|306845032|ref|ZP_07477613.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO1] gi|306274664|gb|EFM56453.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO1] Length = 777 Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust. Identities = 351/776 (45%), Positives = 462/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQVHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR------ 293 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQSDAS 300 Query: 294 -------TREGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 RE + L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQREEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAQKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDEAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 L-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR------ 552 L S F + Q + F +L L ++++IR Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 553 ------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAKG 586 HD + L+ E DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEEDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREAGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDVNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|23501308|ref|NP_697435.1| glycyl-tRNA synthetase subunit beta [Brucella suis 1330] gi|161618379|ref|YP_001592266.1| glycyl-tRNA synthetase subunit beta [Brucella canis ATCC 23365] gi|254703758|ref|ZP_05165586.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|260566988|ref|ZP_05837458.1| glycyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261754404|ref|ZP_05998113.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|23347197|gb|AAN29350.1| glycyl-tRNA synthetase, beta subunit [Brucella suis 1330] gi|161335190|gb|ABX61495.1| glycyl-tRNA synthetase, beta subunit [Brucella canis ATCC 23365] gi|260156506|gb|EEW91586.1| glycyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261744157|gb|EEY32083.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] Length = 777 Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust. Identities = 350/777 (45%), Positives = 462/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNEFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR +L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRPLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|319404561|emb|CBI78167.1| glycyl-tRNA synthetase beta chain [Bartonella rochalimae ATCC BAA-1498] Length = 742 Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust. Identities = 346/729 (47%), Positives = 457/729 (62%), Gaps = 43/729 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA+MQHKAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPAQMQHKAASDLKKCVTDKLINAGLTYKAACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP V + ++ ID FLR+TGL IS I D KKG+ Y+A K RL Sbjct: 61 KSSPDVHEERKGPNVQSPQQVIDAFLRATGLNDISKVHIAHDDKKGNFYIAKTTKKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I PWPKSMRW + + WIR L++ILC+L + + KII + Sbjct: 121 EEIIADILPDIIYNFPWPKSMRWGQESAKNGSLRWIRSLQNILCVLGSAIGETKIIPFTV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+V+ D Y+ LE V+LD E R++ IL D L A Sbjct: 181 GSLKSNNLTYGHRFLSNGKPIQVRRFDDYVSQLENHKVILDAERRKDIILADIQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVEDK LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+T+QKCFVTR R + Sbjct: 241 GLELVEDKALLEEVSGLVEWPVVLMGTFDKTFLSIPPEIIRLTIQTHQKCFVTRKRGEKS 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILV+NI ASD G I +GNS+VV ARL DAL+FW+ DQ NLPN L+ SA K Sbjct: 301 KLSNYFILVANILASDKGIEISKGNSKVVHARLSDALYFWETDQCNLPNTIHLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A LD L+V FHAK+GTQG R+ RI L + IA L+ AD L RA VL Sbjct: 361 DLDLNKPLDQRVAHLDYLNVTFHAKLGTQGARIERIAALTQIIAPLVQADSILAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEI+ EFPELQG IG++YA+LQ EN +AIE+H KP GP + +PT I++TV Sbjct: 421 AKADLQTEIIGEFPELQGLIGRKYALLQGENPLVAEAIEDHYKPLGPKDRIPTESIAVTV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-SQFIEDQNLIL 536 +LADK+DTLI FW INEK + SKDPYALRRA LG+I+++L N + I L F + N +L Sbjct: 481 ALADKIDTLIGFWFINEKATSSKDPYALRRAALGVIKLMLSNDLKIRLIPLFYQAMNFLL 540 Query: 537 ---------------------------------FFHDRLKLYLHDRDIRHDLIEAILRPE 563 FFH+RLK YL D RHD+IEA+L + Sbjct: 541 QQRVKYATSETESAHLQNMPVEKKENIVLDLLAFFHERLKGYLKDEGARHDIIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D++L I ++ L F +S G+ L++ KR IL E KK I +I P+ + Sbjct: 601 ADDILLITRRVEALTFFINSNDGDSLLIAIKRAINILENETKKGTIIINKIKPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC---EPIEIFFDQVLVNVDDREVRDN 680 EK+LY + + I +H ++ L+S+ +PI FF++V VN D+ +R N Sbjct: 661 EKQLYQAMLETEKKI---ANHIHITELSSALNSLALLKKPINAFFEKVFVNDDNINIRAN 717 Query: 681 RLSLLQYIK 689 RL+LL I+ Sbjct: 718 RLALLDRIR 726 >gi|294851785|ref|ZP_06792458.1| glycyl-tRNA synthetase beta subunit [Brucella sp. NVSL 07-0026] gi|294820374|gb|EFG37373.1| glycyl-tRNA synthetase beta subunit [Brucella sp. NVSL 07-0026] Length = 777 Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust. Identities = 349/777 (44%), Positives = 462/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATTYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I AH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQYAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|62289391|ref|YP_221184.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 1 str. 9-941] gi|82699319|ref|YP_413893.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis biovar Abortus 2308] gi|189023643|ref|YP_001934411.1| glycyl-tRNA synthetase subunit beta [Brucella abortus S19] gi|237814878|ref|ZP_04593876.1| glycyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|254688705|ref|ZP_05151959.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|254729738|ref|ZP_05188316.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|256256952|ref|ZP_05462488.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|260545857|ref|ZP_05821598.1| glycyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260754182|ref|ZP_05866530.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|260757402|ref|ZP_05869750.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|260883207|ref|ZP_05894821.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297247804|ref|ZP_06931522.1| glycyl-tRNA synthetase beta subunit [Brucella abortus bv. 5 str. B3196] gi|62195523|gb|AAX73823.1| GlyS, glycyl-tRNA synthetase, beta subunit [Brucella abortus bv. 1 str. 9-941] gi|82615420|emb|CAJ10389.1| Glycyl-tRNA synthetase, beta subunit:Heterodimeric glycyl-transfer RNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189019215|gb|ACD71937.1| Glycyl-tRNA synthetase, beta subunit [Brucella abortus S19] gi|237789715|gb|EEP63925.1| glycyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|260097264|gb|EEW81139.1| glycyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260667720|gb|EEX54660.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|260674290|gb|EEX61111.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|260872735|gb|EEX79804.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297174973|gb|EFH34320.1| glycyl-tRNA synthetase beta subunit [Brucella abortus bv. 5 str. B3196] Length = 777 Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust. Identities = 349/777 (44%), Positives = 462/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E + I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERCKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVD 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|254718585|ref|ZP_05180396.1| glycyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|265983560|ref|ZP_06096295.1| glycyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306839898|ref|ZP_07472696.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] gi|264662152|gb|EEZ32413.1| glycyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306405084|gb|EFM61365.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] Length = 777 Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust. Identities = 349/777 (44%), Positives = 462/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFL GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLCKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDEAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILR--------------PENDNLLTIVDLIKHLNEFFSSAK 585 HD + L+ PE DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVYLKDEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEED 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ + P L EK L+ ++ +++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREAGDAIVRE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|121602631|ref|YP_988699.1| glycyl-tRNA synthetase subunit beta [Bartonella bacilliformis KC583] gi|120614808|gb|ABM45409.1| glycyl-tRNA synthetase, beta subunit [Bartonella bacilliformis KC583] Length = 740 Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust. Identities = 338/739 (45%), Positives = 463/739 (62%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL + L + G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKCVTNKLVDAGLTYKAACEYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + ++ IDGFLR+TGL IS+ I D KKGD Y+A + K R+ Sbjct: 61 TKSQDIYEERKGPSTQSPQQVIDGFLRATGLNNISEAHIAHDNKKGDFYIAKIIKKGRIA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ I+P ++ PWPKSMRW + A WIR L++ILC+ + + II + Sbjct: 121 EDIIAEILPDILRNFPWPKSMRWGEDSAKSGALRWIRSLQNILCVFGPQCGETHIIPFTI 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI ++ D YI LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSDGKPIPIRRFDDYIAQLEAHKVILDAERRKNIILVDAKNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVED L+EE+ GLVEW V MG+FDK +L +P E+IRLTI+ NQKCFVTR + + Sbjct: 241 GLELVEDDPLIEEVAGLVEWPVVLMGNFDKAFLDIPPEIIRLTIRANQKCFVTRKQGEKT 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ F+LVSNI ASD G I++GNS+VV ARL DAL+FW++DQ +L N++ LK SA KF Sbjct: 301 KLSSHFVLVSNILASDEGKEIIKGNSKVVHARLSDALYFWQKDQCDLFNIADLKSSAEKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A LD L+V FHAK+GTQGE+V RI L +KIA ++ AD L RA VL Sbjct: 361 DLDLNKPLDQRIANLDRLNVTFHAKLGTQGEKVERISALVQKIAPIVQADSTLAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +GK YA+LQ E+ +AIE+H +P GP + +P ++I V Sbjct: 421 AKADLQTEIVNEFPELQGFMGKTYALLQGEDPRVAEAIEDHYRPLGPTDRIPQEPVTIAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LADK+DTL+ FW INEKP+ SKDPYALRRA LG+I+++L + I L+ Sbjct: 481 ALADKIDTLVGFWLINEKPTSSKDPYALRRAALGVIKLVLSHNCKINLTSLFHQAINIFL 540 Query: 529 -----------------------IED--QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 I+D +L+ F H+RLK++L D +RHD+IEA+L Sbjct: 541 QQKTEYAAYLKESKQTQDTLVKEIDDILSDLLSFLHERLKIHLKDEGVRHDIIEAVLTKN 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+ IV I+ L F ++ G L + KR IL E KK E + I+ + + Sbjct: 601 ADDFSLIVHRIEVLTSFINTNNGNNLLAAIKRAVNILENESKKGNEFASTINLELFIENE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I + + ++ + + L S+ EPI+ FF++VLVN + +R NRL+ Sbjct: 661 EKQLYQAIIAAEKKVNDHINTTDWLSALNALASLKEPIDKFFEKVLVNDKNAAIRANRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL++I I + + KI+ Sbjct: 721 LLEFIHTITQDIADFSKII 739 >gi|306842309|ref|ZP_07474969.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO2] gi|306287566|gb|EFM59022.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO2] Length = 777 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 348/777 (44%), Positives = 463/777 (59%), Gaps = 76/777 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EEIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDA 299 Query: 298 --------------VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++ Sbjct: 300 SRLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHD 359 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LP+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L Sbjct: 360 LPDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPL 419 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+G Sbjct: 420 VGADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDEAVAAALEEHYKPQG 479 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P + VP N +S+ V+LADKLDTL+ FW I+EKP+GSKDPYALRRA LG+IR++L + Sbjct: 480 PSDVVPKNPVSVAVALADKLDTLVGFWGIDEKPTGSKDPYALRRAALGVIRLLLSQEWKF 539 Query: 524 PL-----SQFI-----EDQNLILFFHDRL----------------KLYLHDRDIR----- 552 PL S F + Q + F +L L ++++IR Sbjct: 540 PLLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEA 599 Query: 553 -------------HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAK 585 HD + L+ E DNLL + ++ L F + Sbjct: 600 SCGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEED 659 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L AKR ILA EEKK +++ ++P L EK L+ ++ + E++ + Sbjct: 660 GKNLLAGAKRAANILAAEEKKGTKVADWVNPALLREAEEKALFDAVTLASREVGEAIARE 719 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DFNGAMLALAKLRGPVDIFFDKVLVNDEDVNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|49475213|ref|YP_033254.1| glycyl-tRNA synthetase subunit beta [Bartonella henselae str. Houston-1] gi|49238018|emb|CAF27224.1| Glycyl-tRNA synthetase beta chain [Bartonella henselae str. Houston-1] Length = 740 Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust. Identities = 339/740 (45%), Positives = 469/740 (63%), Gaps = 39/740 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKSVTDQLVNAGLTYKAAHEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + IDGFLR+TGL IS I D KKGD Y+A + K R Sbjct: 61 IRSKDTHEERKGPSTKSPQHVIDGFLRATGLSDISKAHIAHDHKKGDFYIAKIVKKGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW A WIR L++ILC+ E + +I + Sbjct: 121 EEIIADILPDIIRNFPWPKSMRWGKDSEKSGALKWIRSLQNILCVFGPEIGETHVIPFTI 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P++V+ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSDGKPLQVRRFDDYVTQLEIHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELV+D LLEE++GL+EW V MG+FDK +L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVKDNALLEEVVGLIEWPVVLMGNFDKSFLNIPPEIIRLTIRANQKCFVTR-KQGEK 299 Query: 298 -VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L++ FILVSNI ASD G I +GNS+VV ARL DAL+FW+ DQ++LP++ L+ SA K Sbjct: 300 IKLSHHFILVSNILASDEGKEISKGNSKVVCARLSDALYFWQTDQHDLPDIKYLQSSAKK 359 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 +LDL KPLDQRMA+LD L+V FHAK+GTQG RV RI +L ++IA L+ AD L RA V Sbjct: 360 LDLDLKKPLDQRMAQLDHLNVTFHAKLGTQGARVERITILAQQIAPLVHADPFLAKRAAV 419 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TEIV EFPELQG +G++YA+LQ E+ +AIE+H KP+GP + +P ++I Sbjct: 420 LAKADLQTEIVGEFPELQGLMGRKYALLQGEDPRVAEAIEDHYKPQGPADRIPQEPLAIA 479 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL--ENKIDI-PL-------- 525 V+LADK+D L+ FW INEKPS SKDPYALRRA LG+IR++L + KI++ PL Sbjct: 480 VALADKIDMLVGFWLINEKPSSSKDPYALRRAVLGVIRLVLLRDWKINLMPLFNLTANLF 539 Query: 526 -----------SQFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + + QN L+ FFH+RLK+YL + R+D++EA+L+ Sbjct: 540 LQQKTPYGTSRREATQSQNVLPEKTEHILSDLLSFFHERLKIYLKEEGARYDVLEAVLKK 599 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 + D+LL I ++ L F +++ G+ FL + KR IL E +K+ I EI+P+ + Sbjct: 600 DADDLLLIARHVEALIAFINTSDGDSFLAAVKRTVNILEAESQKDSTIEDEINPELFIET 659 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 EK+LY I++ + S++ + + L + + I+ FF++VLVN + VR NRL Sbjct: 660 EEKQLYQAITEIEKTVHHSINATNLPHLLNTLTPLGKFIDTFFEKVLVNDKNPHVRTNRL 719 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL+ I + + K+V Sbjct: 720 ALLKRIHTLTQKAADFSKLV 739 >gi|163867855|ref|YP_001609059.1| glycyl-tRNA synthetase subunit beta [Bartonella tribocorum CIP 105476] gi|161017506|emb|CAK01064.1| glycyl-tRNA synthetase beta chain [Bartonella tribocorum CIP 105476] Length = 740 Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust. Identities = 343/740 (46%), Positives = 465/740 (62%), Gaps = 39/740 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA +L + L G+ Y+ R+YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAANLKKTVTDQLVNAGLTYKAAREYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + AIDGFLR+TGL IS+ I D KKGD Y+A + K R Sbjct: 61 IRSKDVHEERKGPSTKSPQYAIDGFLRATGLNDISEAHIGHDDKKGDFYIAKIVKKGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E++L I+P I+ PWPKSMRW + A WIRPL++ILCI E + +I + Sbjct: 121 EEILADILPDIIRNFPWPKSMRWGKDSAKSGALKWIRPLQNILCIFGPEIGETHVIPFTI 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P +V+ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GSLESNNLTYGHRFLSDGKPFQVRRFDDYVTQLETHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLEL++D+ LLEE+ GLVEW + MG FDK +L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELIQDEALLEEVAGLVEWPVILMGDFDKSFLDIPPEIIRLTIRANQKCFVTR-KQGEK 299 Query: 298 -VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L++ FILVSNI A+D G I +GNS+VV ARL DAL+FW++DQ +LP++ L+ S K Sbjct: 300 IKLSHHFILVSNILANDEGKEISKGNSKVVRARLSDALYFWQKDQRDLPDIQQLESSIKK 359 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 F+LD+ KPLDQRMARLD L+V FHAK+GTQ RV RI L +KIA LI AD L +RA + Sbjct: 360 FDLDIKKPLDQRMARLDHLNVTFHAKLGTQSARVERIATLAQKIAPLIQADPLLANRAAI 419 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TEIV EFPELQG +G +YA+LQ E+ AIEEH KP+GP + +P ++IT Sbjct: 420 LAKADLQTEIVGEFPELQGVMGHKYALLQGEDPRVAVAIEEHYKPQGPADRLPQEPLAIT 479 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN--KIDI-PLSQ-----F 528 + LADK+D L+ FW INEKP+GSKDPYALRRA LGIIR+IL KI++ PL Q F Sbjct: 480 IMLADKIDMLVGFWLINEKPTGSKDPYALRRAALGIIRLILSRDWKINLMPLFQLATNLF 539 Query: 529 IEDQN--------------------------LILFFHDRLKLYLHDRDIRHDLIEAILRP 562 ++ +N L+ FFHDRLK+YL + R+D +EA+L Sbjct: 540 VQQKNKYEISQRENPQLQNLLPETTEVILSDLLFFFHDRLKIYLKEEGARYDALEAVLNK 599 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 ++D+ L + ++ L F ++ G F+ S KR IL E +K+ I+ EI+P+ + Sbjct: 600 DSDDFLLVARHVESLIAFINTHDGMNFVASVKRTANILQNELQKSTTIANEINPELFFEK 659 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 EK+LY I + + ++ +L + + I++FF++VLVN +VR NRL Sbjct: 660 EEKQLYHAICEVEKKVLAPINITNLSFALGILAPLGKLIDLFFEKVLVNDKKPDVRANRL 719 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL+ I V + K+ Sbjct: 720 ALLKRTHTITQAVADFSKLA 739 >gi|319407554|emb|CBI81204.1| glycyl-tRNA synthetase beta chain [Bartonella sp. 1-1C] Length = 742 Score = 628 bits (1620), Expect = e-178, Method: Compositional matrix adjust. Identities = 343/729 (47%), Positives = 456/729 (62%), Gaps = 43/729 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA+MQ KAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPAQMQRKAASDLKKCVTDKLINAGLTYKAACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP V + ++ ID FLR+TGL IS I D KKG+ Y+A K RL Sbjct: 61 KSSPDVHEERKGPNVQSPQQVIDAFLRATGLNDISKVHIAHDDKKGNFYIAKTTKKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I PWPKSMRW + + WIR L++ILC+ + + KII + Sbjct: 121 EEIIADILPDIIYNFPWPKSMRWGQESAKNGSLRWIRSLQNILCVFGSAIGETKIIPFTV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + +PI+V+ D YI LE V+LD E R++ IL D L A Sbjct: 181 GSLKSNNLTYGHRFLSNGNPIQVRRFDDYISQLENHKVILDAERRKDIILADIQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVEDK LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+T+QKCFVTR R + Sbjct: 241 GLELVEDKALLEEVSGLVEWPVVLMGTFDKTFLSIPPEIIRLTIQTHQKCFVTRKRGEKS 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSNI ASD G I +GNS+VV ARL DAL+FW+ DQ NLPN L+ SA K Sbjct: 301 KLSNYFILVSNILASDKGIEISKGNSKVVHARLSDALYFWETDQCNLPNTMHLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A L L+V FHAK+GTQG R+ RI L + IA L+ AD L RA VL Sbjct: 361 DLDLNKPLDQRVAHLHYLNVTFHAKLGTQGARIERIAALTQTIAPLVQADSILAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEI+ EFPELQG IG++YA+LQ E+ +AIE+H +P GP + +P I++TV Sbjct: 421 AKADLQTEIIGEFPELQGVIGRKYALLQGEDPLVAEAIEDHYRPLGPKDRIPITPIAVTV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------ 525 +LADK+DTLI FW INEKP+ SKDPYALRRA LG+I++IL N + I L Sbjct: 481 ALADKIDTLIGFWFINEKPTSSKDPYALRRAALGVIKLILSNDLKIRLIPLFHQAINFLL 540 Query: 526 ----------SQFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 ++ + QN L+ F H+RLK YL D RHD+IEA+L + Sbjct: 541 QQRVKYAASETKGVNLQNISVEKKENIVLDLLAFLHERLKGYLKDEGARHDIIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D++L I ++ L F +S G+ L++ KR IL E KK I ++ P+ + Sbjct: 601 ADDILLITRRVETLTFFINSNDGDSLLIAIKRAINILENETKKGMIIINKVKPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC---EPIEIFFDQVLVNVDDREVRDN 680 EK+LY + I DH ++ L+S+ +PI FF++V VN D+ ++R N Sbjct: 661 EKQLYQATLETEKKI---ADHIHITELSSALNSLALLKKPINAFFEKVFVNDDNIDIRAN 717 Query: 681 RLSLLQYIK 689 RL+LL I+ Sbjct: 718 RLALLNRIR 726 >gi|240850063|ref|YP_002971456.1| glycyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] gi|240267186|gb|ACS50774.1| glycyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] Length = 740 Score = 622 bits (1605), Expect = e-176, Method: Compositional matrix adjust. Identities = 340/739 (46%), Positives = 466/739 (63%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL + L G+IY+ R+YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKSVTDQLVNAGLIYEAAREYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + + IDGFLR+TGL IS+ I D KKG Y+A + K R Sbjct: 61 IRSKDIHEERRGPSIKSPQHVIDGFLRATGLNDISEAHIGHDDKKGHFYIAKIVKKGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW + A WIRPL++ILC+ E + +I + Sbjct: 121 EEIIADILPNIIRNFPWPKSMRWGKDSAQSGALKWIRPLQNILCVFGPEIGETHVIPFTI 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P +V+ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSDGKPFQVRRFDDYVTQLETHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 GLELV+D LLEE+ GLVEW + MG FD+ +L +P E+IRLTI+ NQKCFVTR + E V Sbjct: 241 GLELVQDNPLLEEVAGLVEWPVILMGDFDQSFLDIPPEIIRLTIRANQKCFVTRKQGEKV 300 Query: 299 -LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ FILVSNI ++D G I +GNS+VV ARL DAL+FW+ DQ +LP++ L+ S KF Sbjct: 301 KLSHHFILVSNILSNDEGKEISKGNSKVVRARLSDALYFWQTDQRDLPDIQQLESSIKKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LD+ KPLDQRMARLD L+V FHAK+GTQG RV RI L ++I+ LI D L RA +L Sbjct: 361 DLDIKKPLDQRMARLDHLNVTFHAKLGTQGARVERIATLAQEISPLIQTDPLLAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +G++YA+LQ E+ AIE+H KP+GP + +P ++ITV Sbjct: 421 AKADLQTEIVGEFPELQGVMGQKYALLQGEDPRVAVAIEDHYKPQGPTDRLPQEPLAITV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN--KIDI-PLSQ-----FI 529 LADK+D L+ FW INEKP+GSKDPYALRRA LG+IR++L KI++ PL Q F+ Sbjct: 481 MLADKIDMLVGFWLINEKPTGSKDPYALRRAALGVIRLVLSRDWKINLMPLFQLAMNLFL 540 Query: 530 EDQN--------------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + +N L+ FFHDRLK+YL + R+D +EA+L + Sbjct: 541 KQKNKYEISQRENSQLLNLLPEKTEYILSDLLFFFHDRLKIYLKEEGARYDALEAVLNKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D+ L + ++ L F ++ G F+ S KR IL E +K+ I EI+P+ + + Sbjct: 601 SDDFLLVARRVESLIAFINTHDGMNFVASVKRTANILENEFQKSTTIVNEINPELFVEKE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I + + ++ + +L + + I+IFF++VLVN +VR NRL+ Sbjct: 661 EKQLYHAICEVEKQVLAPINATNLSFVLSVLAPLGKLIDIFFEKVLVNDKKPDVRANRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ I I V + K+V Sbjct: 721 LLKCIHIITQSVADFSKLV 739 >gi|319408196|emb|CBI81849.1| glycyl-tRNA synthetase beta chain [Bartonella schoenbuchensis R1] Length = 740 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 336/740 (45%), Positives = 460/740 (62%), Gaps = 39/740 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLE++SEEIPARMQ KAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MSNLLLELFSEEIPARMQRKAASDLKKCVTDQLVHAGLTYKAACEYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + IDGFLR+TGL IS+ I D KKGD Y+A + K R Sbjct: 61 TSSQDTHEERRGPSTKSPQHMIDGFLRATGLNNISEAHIVHDSKKGDFYVAKITKKGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW + A W+R L++ILC+ E + I+ + Sbjct: 121 EEIIADILPDIIRNFPWPKSMRWGQDSAQTGALKWVRSLQNILCVFGPEIGETHIVPFTV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+++ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GFLKSNNLTYGHRFLSDGKPIQIRRFDDYVTLLEAHKVILDTERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELV+D LLEE+ GLVEW V MG FDK +L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVQDNALLEEVAGLVEWPVVLMGDFDKTFLDIPPEIIRLTIRANQKCFVTR-KQGEK 299 Query: 298 -VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L+N FILVSN+ A+DGG I +GNS+VV ARL DAL+FW+ DQ++LP+++ LK+SA K Sbjct: 300 IKLSNHFILVSNVLANDGGKEITKGNSKVVRARLSDALYFWQTDQHDLPDIAHLKDSAAK 359 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 F+LDL+KPLDQR+A+LD L+V FHAK+GTQG RV RI L +KIA L+ AD L RA + Sbjct: 360 FDLDLNKPLDQRIAQLDYLNVTFHAKLGTQGARVERIAALAQKIAPLVQADPLLAKRAAI 419 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL T IV EFPELQG +G++YA+LQ E+ +AIE+H KP GP + +P I+I Sbjct: 420 LAKADLQTGIVAEFPELQGLMGRKYALLQGEDPHVAEAIEDHYKPLGPTDRIPCEPIAIA 479 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL------------ENKIDIP 524 V+LADK+D L+ FW INEKP+ SKDPYALRRA LGII+++L + +D+ Sbjct: 480 VALADKIDILVGFWLINEKPTSSKDPYALRRAALGIIKLVLSRDWKINLMPLFDQAVDLF 539 Query: 525 LSQFI----------EDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRP 562 L Q I + QN L+ F H+RLK+YL D R+D IEA+L Sbjct: 540 LQQKIKYTSPKIEAKQQQNTLSETKKDILSDLLSFLHERLKIYLKDEGARYDAIEAVLTK 599 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 + D+ L + I+ L F ++ G FL S KR+ IL + K+ ++P+ Sbjct: 600 DADDFLLVARCIESLIVFINTNDGNDFLASVKRVVNILENQPSKDITTINTLNPELFSEI 659 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 EK+LY I D + + + + L + +PI+ FF++VLVN + +R NRL Sbjct: 660 EEKQLYQAIIDAEKKLHDQTNATNLSLALNALVPLKKPIDTFFEKVLVNDKNSAIRANRL 719 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL+ I+ I V + K+ Sbjct: 720 ALLERIRLITQNVADFSKLA 739 >gi|319406070|emb|CBI79700.1| glycyl-tRNA synthetase beta chain [Bartonella sp. AR 15-3] Length = 742 Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust. Identities = 344/738 (46%), Positives = 461/738 (62%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA MQ +AA DL +I L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPASMQRRAASDLKKCVINKLVNAGLTYKVACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP V + ++ ID FLR+TGL IS I D KKGD Y+A + RL Sbjct: 61 KSSPNVHEERKGPNVQSPQQIIDAFLRTTGLNDISKLHIAHDDKKGDFYIAKTTQKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PW KSMRW + A WIR L++ILC+ + + +I + Sbjct: 121 EEIIADILPDIIRNFPWKKSMRWGKESAKSGALKWIRSLQNILCVFGSAMDETHVIPFTV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+++ D Y+ LE V+LD E R++ IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSNGEPIQIRRFDDYVTQLENHKVILDAERRKDIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLEL+EDK LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+T+QKCFVT R +G Sbjct: 241 GLELIEDKALLEEVAGLVEWPVVLMGNFDKTFLNIPPEIIRLTIQTHQKCFVTHKRGEKG 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILV+NI ASD G I +GNS+VV ARL DAL+FW+ DQ NLPN++ L+ SA K Sbjct: 301 KLSNHFILVANILASDKGIEISKGNSKVVHARLSDALYFWQTDQCNLPNITRLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A LD L+V FH K+GTQG RV RI L + IA L AD L RA VL Sbjct: 361 DLDLNKPLDQRIAHLDYLNVTFHTKLGTQGARVERIATLTQTIAPLAQADSILAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T IV EFPELQG IG++YA+LQ E+ +AIE+H KP GP + +P I+ITV Sbjct: 421 AKADLQTGIVSEFPELQGLIGRKYALLQGEDPRVAEAIEDHYKPLGPKDRIPFEPIAITV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN--KID-IPL--------- 525 +LADK+DTLI FW INEKP+ SKDPYALRRA LG+I++IL N KI+ IPL Sbjct: 481 ALADKIDTLIGFWFINEKPTSSKDPYALRRAALGVIKLILLNDWKINLIPLLHQAMNCLL 540 Query: 526 -------SQFIED-----------QNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPE 563 + IE +N+IL FFH+RLK YL D RHD+IEA+L Sbjct: 541 QQKIKYATSEIESVQLQNMSIEKKENIILDLLAFFHERLKGYLKDEGARHDIIEAVLTKS 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D++L I ++ L F ++ G+ L++ KR IL E KK I ++ P+ + Sbjct: 601 DDDILFITRRVEALTFFINTHDGDSLLIAVKRAINILENEIKKGTAIINKVKPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + I + + + + L + +PI FF++V VN D+ +R NR + Sbjct: 661 EKQLYQATIETEKKIADHIHVTELSSVLNSLSLLKKPINAFFEKVFVNDDNINIRANRFA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL+ I+ + V + K+ Sbjct: 721 LLERIRIVTQRVADFSKL 738 >gi|319899206|ref|YP_004159299.1| glycyl-tRNA synthetase beta chain [Bartonella clarridgeiae 73] gi|319403170|emb|CBI76729.1| glycyl-tRNA synthetase beta chain [Bartonella clarridgeiae 73] Length = 742 Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust. Identities = 337/738 (45%), Positives = 455/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA MQ +AA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPAHMQRRAASDLKKCVTDKLVNAGLSYKAACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP + ++ ID FLR+TGL IS I D KKGD Y+A K RL Sbjct: 61 KSSPDVHEERKGPNAQSPQQVIDAFLRTTGLNDISKVHITHDDKKGDFYIAKTTKKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PW KSMRW + A WIR L++ILC+ + + II + Sbjct: 121 EEIIADILPDIIRNFPWQKSMRWGQESAKSGALRWIRSLQNILCVFGSAIGETHIIPFTV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + I+V+ D Y+ LE V+LD E R++ IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSNGKSIQVRRFDDYVTQLENHKVILDAERRKDIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVEDK LLEE+ GLVEW V M +FDK +L +P E+IRLTI+T+QKCFVTR R + Sbjct: 241 GLELVEDKALLEEVAGLVEWPVVLMSTFDKTFLNIPPEIIRLTIQTHQKCFVTRKRGDKS 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILV+NI A+D G I +GNS+VV ARL DAL+FW+ DQ NLPN++ L+ SA K Sbjct: 301 KLSNYFILVANILANDKGIEISKGNSKVVNARLSDALYFWQTDQCNLPNITHLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A+L+ L+V FHAK+GTQG +V RI L + IA L+ AD L RA +L Sbjct: 361 DLDLNKPLDQRIAQLNYLNVTFHAKLGTQGAKVERIAALTQIIAPLVKADSILAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG IG++YA+LQ E+ +AIE+H KP GP + +P I+ITV Sbjct: 421 AKADLQTEIVGEFPELQGLIGRKYALLQGEDPRVAEAIEDHYKPLGPKDRIPCEPIAITV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------ 525 +LADK+DTLI FW INEKP+ SKDPYALRRA LG+IR++L N I L Sbjct: 481 ALADKIDTLIGFWFINEKPTSSKDPYALRRAALGVIRLMLLNDWKISLMPLFHQAMNFLL 540 Query: 526 ----------SQFIEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 ++ + QN L+ FFH+RLK YL D RHD+IEA+L + Sbjct: 541 QQKIQYATSETEATQLQNISVEKTENIVLDLLTFFHERLKGYLKDEGARHDIIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D++L I ++ L F ++ G L++ KR IL E KK I ++ P+ + Sbjct: 601 SDDILLIARRVEALTFFINTNDGNSLLIAVKRAINILENETKKGTTIINKVRPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + I + + L + +PI FF++V VN + +R NRL+ Sbjct: 661 EKQLYQTTIETEKKIADHIHVTELSSTLSSLLLLKKPINEFFEKVFVNDGNINIRTNRLA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL+ I+ + V + K+ Sbjct: 721 LLERIRIVTQNVADFSKL 738 >gi|153007867|ref|YP_001369082.1| glycyl-tRNA synthetase subunit beta [Ochrobactrum anthropi ATCC 49188] gi|151559755|gb|ABS13253.1| glycyl-tRNA synthetase, beta subunit [Ochrobactrum anthropi ATCC 49188] Length = 764 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 344/764 (45%), Positives = 458/764 (59%), Gaps = 63/764 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L E G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVEAGLTYEAATPYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL ++ + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVTAPEQAIQGFLRKAGLTDVAQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + + W+RPL+SILC E + +ID D+ Sbjct: 121 EEIVAELVPQTIRNFPWPKSMRWGAASARPGSLRWVRPLQSILCTFGPETEETVVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + PIKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQPIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-- 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGEA 299 Query: 298 -VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L+N FILVSNI A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA K Sbjct: 300 EALSNKFILVSNIAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLVASAEK 359 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 F LDL KPLDQRMARLD L+V FHAK+GTQG RV RIR L +IA L+ AD L RA V Sbjct: 360 FGLDLKKPLDQRMARLDALNVTFHAKLGTQGARVERIRELAAQIAPLVGADPKLAARAAV 419 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TE+V EFPELQG +G++YA+LQ E+ + AIEEH KP+GP + VP N +S+ Sbjct: 420 LAKADLTTEVVGEFPELQGAMGRKYALLQGEDEAVAAAIEEHYKPQGPSDVVPKNPVSVA 479 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFI-- 529 V+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IR++L + PL S F Sbjct: 480 VALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRLLLSQEWKFPLLPLFRSAFAAL 539 Query: 530 ---EDQNLILFFHDRL----------------KLYLHDRDIR------------------ 552 + Q + F +L L +++ +R Sbjct: 540 KEGQVQRKLREFETKLAGENSGDIDGEQDVDNALASYEKQVRAEAEASSEPVLADLLSFL 599 Query: 553 HDLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 HD + L+ E DNLL + ++ L F + G+ L KR Sbjct: 600 HDRFKVHLKEEGARYDAIDAVLSPEADNLLLVARRLEALIVFINEEDGKNLLAGTKRAAN 659 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 ILA EEKK +++ +S L EK L+ ++ + ++ + ++ L + Sbjct: 660 ILAAEEKKGTKVADSVSASLLHEAEEKALFEAVTLASQDAEAAIAREDFNGAMLALAKLR 719 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 P++ FF++VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 GPVDTFFEKVLVNDEDENVRANRLALLDQIRAATGKVADFSKIA 763 >gi|261757637|ref|ZP_06001346.1| glycyl-tRNA synthetase [Brucella sp. F5/99] gi|261737621|gb|EEY25617.1| glycyl-tRNA synthetase [Brucella sp. F5/99] Length = 761 Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust. Identities = 338/761 (44%), Positives = 449/761 (59%), Gaps = 76/761 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ S + E+ GP V Sbjct: 1 MQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLALDIRGLTVRSKDVHEDIKGPSVS 60 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A ++AI GFLR GL +S + DPKKGD Y+A L KP R ED++ +VP I+ P Sbjct: 61 APEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAAEDIVAELVPQTIRNFP 120 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 WPKSMRW + A W+RPL+SILC E + K+ID D+ I GN+TYGHRF + Sbjct: 121 WPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDVDGIKSGNVTYGHRFLS 180 Query: 197 -PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 IKV+ + Y+ LE+A V+LD E R+ I DAH LA A GLELVED LLEE+ G Sbjct: 181 DGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFASGLELVEDDGLLEEVSG 240 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG----------------VL 299 LVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G L Sbjct: 241 LVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDASRLASPAPQHEEIQAL 299 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF L Sbjct: 300 SNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGL 359 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+K Sbjct: 360 DLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAK 419 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+L Sbjct: 420 ADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVAL 479 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFI----- 529 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL S F Sbjct: 480 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEG 539 Query: 530 EDQNLILFFHDRL----------------KLYLHDRDIR------------------HDL 555 + Q + F +L L ++++IR HD Sbjct: 540 QMQRKLREFEAKLAAENSGGVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDR 599 Query: 556 IEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 + L+ E DNLL + ++ L F + G+ L AKR ILA Sbjct: 600 FKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILA 659 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 EEKK +++ + P L EK L+ ++ + E++ + ++ L + P+ Sbjct: 660 AEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPV 719 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 760 >gi|261221621|ref|ZP_05935902.1| glycyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|260920205|gb|EEX86858.1| glycyl-tRNA synthetase subunit beta [Brucella ceti B1/94] Length = 761 Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust. Identities = 338/761 (44%), Positives = 449/761 (59%), Gaps = 76/761 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ S + E+ GP V Sbjct: 1 MQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLVLDIRGLTVRSKDVHEDIKGPSVS 60 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A ++AI GFLR GL +S + DPKKGD Y+A L KP R ED++ +VP I+ P Sbjct: 61 APEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAAEDIVAELVPQTIRNFP 120 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 WPKSMRW + A W+RPL+SILC E + K+ID D+ I GN+TYGHRF + Sbjct: 121 WPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDVDGIKSGNVTYGHRFLS 180 Query: 197 -PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 IKV+ + Y+ LE+A V+LD E R+ I DAH LA A GLELVED LLEE+ G Sbjct: 181 DGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFASGLELVEDDGLLEEVSG 240 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG----------------VL 299 LVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G L Sbjct: 241 LVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDASRLASPAPQHEEIQAL 299 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF L Sbjct: 300 SNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGL 359 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+K Sbjct: 360 DLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAK 419 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+L Sbjct: 420 ADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVAL 479 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFI----- 529 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL S F Sbjct: 480 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEG 539 Query: 530 EDQNLILFFHDRL----------------KLYLHDRDIR------------------HDL 555 + Q + F +L L ++++IR HD Sbjct: 540 QMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDR 599 Query: 556 IEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 + L+ E DNLL + ++ L F + G+ L AKR ILA Sbjct: 600 FKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILA 659 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 EEKK +++ + P L EK L+ ++ + E++ + ++ L + P+ Sbjct: 660 AEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPV 719 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 760 >gi|260563481|ref|ZP_05833967.1| glycyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265990534|ref|ZP_06103091.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|265999600|ref|ZP_05467081.2| glycyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|260153497|gb|EEW88589.1| glycyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|263001318|gb|EEZ13893.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|263094883|gb|EEZ18621.1| glycyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|326408438|gb|ADZ65503.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis M28] gi|326538154|gb|ADZ86369.1| glycyl-tRNA synthetase, beta subunit [Brucella melitensis M5-90] Length = 761 Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust. Identities = 337/761 (44%), Positives = 448/761 (58%), Gaps = 76/761 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ S + E+ GP V Sbjct: 1 MQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLTVRSKDVHEDIKGPSVS 60 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A ++AI GFLR GL +S + DPKKGD Y+A L KP R ED++ +VP I+ P Sbjct: 61 APEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAAEDIVAELVPQTIRNFP 120 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 WPKSMRW + A W+RPL+SILC E + K+ID D+ I GN+TYGHRF + Sbjct: 121 WPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDVDGIKSGNVTYGHRFLS 180 Query: 197 -PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 IKV+ + Y+ LE+A V+LD E R+ I DAH LA A GLELVED LLEE+ G Sbjct: 181 DGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFASGLELVEDDGLLEEVSG 240 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG----------------VL 299 LVEW V MG F++++L +P E+IRLTI+ NQKCFVTR ++G L Sbjct: 241 LVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDASRLASPAPQHEEIQAL 299 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF L Sbjct: 300 SNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGL 359 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+K Sbjct: 360 DLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAK 419 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+L Sbjct: 420 ADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVAL 479 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFI----- 529 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL S F Sbjct: 480 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEG 539 Query: 530 EDQNLILFFHDRL----------------KLYLHDRDIR------------------HDL 555 + Q + F +L L ++++IR HD Sbjct: 540 QMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDR 599 Query: 556 IEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 + L+ E DNLL + ++ L F + G+ L AKR ILA Sbjct: 600 FKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILA 659 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 EEKK +++ + P L EK L+ ++ + E++ + ++ L + P+ Sbjct: 660 AEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPV 719 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 720 DIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 760 >gi|260460347|ref|ZP_05808599.1| glycyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] gi|259033992|gb|EEW35251.1| glycyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] Length = 792 Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust. Identities = 289/528 (54%), Positives = 375/528 (71%), Gaps = 2/528 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL +L L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKMLTDGLVEAGLTYEAAREYWTPRRLTLDVRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GFLR GL +I++ + DPKKGD Y+A + KP R Sbjct: 61 ARSKDISEEIKGPSTTAPEQAVQGFLRKAGLSSIAEAHVHSDPKKGDFYVAHISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ +VP I+ PWPKSMRW + + W+RPL+SILC E + ++D ++ Sbjct: 121 EQIIAELVPGIIRNFPWPKSMRWGPASAKPGSLRWVRPLQSILCTFGPETEEPVVVDFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N+TYGHRF AP I V+ D Y+ LE A V+LD + R+ IL DA LA A G Sbjct: 181 DGIRSCNVTYGHRFLAPGEITVRRFDDYVSKLEAAKVVLDADRRKEIILADARNLAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EG-V 298 L+LVED+ LLEE+ GLVEW V MG F++ +L +P E+IRLTI+ NQKCFVTR + EG Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGEFEEAFLAIPAEVIRLTIRANQKCFVTRPQGEGET 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FIL +NI+A+DGG I GN +VV ARL DAL+FW DQ +LP+L L+ SA KF Sbjct: 301 LSNRFILTANIEATDGGKEIAHGNGKVVRARLSDALYFWTTDQGDLPDLGQLEASAEKFG 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL KPLDQRMARLD LDV FHAK+GTQGER RI+ L +++A ++ AD AL RA +L+ Sbjct: 361 LDLKKPLDQRMARLDHLDVTFHAKLGTQGERAERIKRLAEQLAPIVGADPALASRAAILA 420 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ S AIEEH KP+GP + VP++ +S+TV+ Sbjct: 421 KADLTTEVVGEFPELQGAMGRKYALLQGEHPSVAAAIEEHYKPQGPSDYVPSDPVSVTVA 480 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG++R+ILENK+ + L Sbjct: 481 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGMVRVILENKLKLSLG 528 Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 2/183 (1%) Query: 520 KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ LS I D L+ FFHDRLK+YL D+ RHDLI+A++ P +D+LL IV ++ L Sbjct: 611 ELEASLSPLIAD--LLSFFHDRLKVYLRDQGARHDLIDAVITPRSDDLLQIVRRVEALGS 668 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + G+ L KR ILA EEKK I+ + P +AE L+A ++ Sbjct: 669 FLDTEDGKNLLAGTKRAANILAAEEKKKTAIAQTVEPALFRQDAENSLFAAVNQAEKQAG 728 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 E++ ++ + L ++ EP++ FF+ VLVN ++ VR NRL+LL I++ V + Sbjct: 729 EAIQNEDFSAAMLALSALREPVDSFFEHVLVNDENLAVRANRLALLARIRSATGQVADFS 788 Query: 700 KIV 702 KI Sbjct: 789 KIA 791 >gi|299134688|ref|ZP_07027880.1| glycyl-tRNA synthetase, beta subunit [Afipia sp. 1NLS2] gi|298590498|gb|EFI50701.1| glycyl-tRNA synthetase, beta subunit [Afipia sp. 1NLS2] Length = 691 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 317/712 (44%), Positives = 441/712 (61%), Gaps = 34/712 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L E++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + GL Sbjct: 1 MPDLLFELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EER GP+VGA A+ GFL++TGL+++ + +I+KDPKKGD Y+A++ KP R Sbjct: 61 GRQPDLKEERKGPKVGAPDAAVQGFLKATGLKSLDEAKIQKDPKKGDFYIALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ I+PV ++ PWPK MRW + A +W+RPL SI+ E ++ D+ Sbjct: 121 IDVIAEILPVIVRTFPWPKQMRWGAGSATRGALTWVRPLHSIIATFGLETEDPDVVKFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ + Y+ LE A V+LDP+ RR+ IL DA +LA A G Sbjct: 181 GGIEAGQVTRGHRFMAPAEFSVRRFEDYVAKLEAAKVVLDPQRRRDIILADAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED+ LLEE+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV R + G L Sbjct: 241 YELVEDEALLEEVAGLVEWPVALMGSFDQDFLSIPGEVIRATIRNNQKCFVVRDPKTGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FILVSNI+A+DGG AIV GN RV+ ARL DA F++ Sbjct: 301 APKFILVSNIEATDGGKAIVAGNERVIRARLSDAKFFYE--------------------T 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + + ++VFH K+GTQ ER++RI L +IA L+ ADV RA L+K Sbjct: 341 DLKTKLEARLPKFE--NIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKTKRAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E+ S AIE+H KP+GP + VP + ++I V+L Sbjct: 399 ADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAAAIEDHYKPQGPNDRVPNDPVAIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-LSQFI------EDQ 532 ADK+D L FWAI+EKP+GSKDP+ALRRA LG IR+I +N I +P L+ F + + Sbjct: 459 ADKIDILTGFWAIDEKPTGSKDPFALRRAALGAIRLIADNGIRLPLLATFAKAAKPHDGK 518 Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FF DRLK+ L ++ RHDL++A+ D+LL +V ++ L +F + G+ L Sbjct: 519 DLLSFFADRLKVQLREQGARHDLVDAVFALGGQDDLLMVVRRVEALGKFLDTDDGKNLLA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLL--LEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR ILAIEEKK++ + +P+ L L+ EK L A I ++ + + Sbjct: 579 GTKRASNILAIEEKKDKR-NFTGAPEASLYKLDEEKNLAAAIEQVKAEAGTAVAKEDFAG 637 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 638 AMGALAKLRPVVDAFFDKVKVNDDDKAVRENRLKLLNEIREATRAVADFSKI 689 >gi|220924241|ref|YP_002499543.1| glycyl-tRNA synthetase subunit beta [Methylobacterium nodulans ORS 2060] gi|254781857|sp|B8IBI6|SYGB_METNO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219948848|gb|ACL59240.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium nodulans ORS 2060] Length = 701 Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust. Identities = 323/721 (44%), Positives = 434/721 (60%), Gaps = 42/721 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLRKLVTDALVERGFLYEGAKAFATPRRLALHIAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVGA + AI GFL+S GL +++D + DPKKG+ Y+AV+ +P R Sbjct: 61 TRGKDVREERKGPRVGAPEAAIQGFLKSAGLTSLADATVVADPKKGEFYVAVIERPGRDT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL SI+ E + + + Sbjct: 121 IDVLAEILPAVIRNFPWPKSMRWGAASTEPGSLRWVRPLHSIVASFGPETETPERVPFAI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP PI+V+ Y+ LE A V+LD + RR+ IL+DA LA A G Sbjct: 181 DGIEAGFTTYGHRFLAPGPIEVRRFADYLPALERARVVLDADRRRDIILHDARDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR--TREG- 297 L+LVED+ LLEE+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV R +++G Sbjct: 241 LDLVEDEGLLEEVAGLVEWPVTLMGSFDESFLDIPPEVIRATIRANQKCFVLRAPSQDGR 300 Query: 298 -VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 LAN FILVSN+ ASDGGAAIV GN RVV ARL DA FW+ D+ Sbjct: 301 ERLANAFILVSNLAASDGGAAIVAGNERVVRARLSDAKFFWETDKK-------------- 346 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 PL+ R+ +L D+VFH K+GTQG RV RI L + +A L+ AD L RA Sbjct: 347 ------VPLESRLPKLK--DIVFHEKLGTQGARVERIAALARNLAPLVGADAGLAGRAAR 398 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TE+V EFPELQG +G+ YA LQ E + AIEEH KP GP + VPT +S+ Sbjct: 399 LAKADLVTEMVGEFPELQGLMGRYYAELQGEPAAIATAIEEHYKPLGPSDRVPTEPVSVA 458 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----SQFIEDQ 532 V+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IR++L + +PL +Q + Sbjct: 459 VALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRLVLAGDVRLPLLGAFAQAVAGH 518 Query: 533 ----------NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 +L+ FF DRLK++L D+ RHDLI+A+ P D+LL IV ++ L F Sbjct: 519 AAVGPESFAADLLGFFADRLKVHLRDQGARHDLIDAVFAIPGQDDLLMIVRRVEALGRFL 578 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G L +R IL IEEK++ R P L E L + E Sbjct: 579 DTEDGRNLLAGFRRAANILRIEEKRDGRAYDAAPDPALFSLPEESALANALDAARARAAE 638 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + L ++ P++ FFD+V VN +D +R NRL+LL ++ V + + Sbjct: 639 AVAAEDFEGAMRALATLRPPVDAFFDKVTVNAEDAALRANRLALLNALREATRAVADFAR 698 Query: 701 I 701 I Sbjct: 699 I 699 >gi|298293954|ref|YP_003695893.1| glycyl-tRNA synthetase subunit beta [Starkeya novella DSM 506] gi|296930465|gb|ADH91274.1| glycyl-tRNA synthetase, beta subunit [Starkeya novella DSM 506] Length = 687 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 316/705 (44%), Positives = 449/705 (63%), Gaps = 24/705 (3%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ AAE+L ++ L E G++Y+ + + TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQAGAAENLRKLVTDALVERGLLYEGAKAFVTPRRLALAIHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 H P+ EER GPRVGA + AI GFL++ GL ++ + +I DPKKGD Y+A + + R Sbjct: 61 AHQPDTHEERKGPRVGAPEAAIQGFLKAAGLSSLDEAKIVSDPKKGDSYVAHIHRHGRPT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ IVP ++ PWPKSMRW + + W+RPL+SILC E + +++ ++ Sbjct: 121 PDVVAEIVPEIVRGFPWPKSMRWGKASAETGSLRWVRPLQSILCTFGPETEEPEVVRFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ T GHRF + I+V+ LD ++ LE A V+ D + R++ ILNDA LA A G Sbjct: 181 DGLESGDTTRGHRFLSEGAIRVRRLDDWMAKLEAAFVVADRDRRKDIILNDAKDLALAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED+ LL+EI GLVEW V MG+F++ +L +P+E+IR TI+ NQKCFV + G L Sbjct: 241 LELVEDEGLLDEIAGLVEWPVVLMGAFEEGFLDVPDEVIRATIRINQKCFVLKDPATGRL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FILVSN++ASDGG AIV GN RV+ ARL DA FW+ D+ Sbjct: 301 ANRFILVSNLKASDGGKAIVAGNERVIRARLSDAKFFWETDKKT---------------- 344 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + + PL++R+A+ +V FH K+G+Q ER+ RI L K +A L+ AD L +RA + +K Sbjct: 345 NAAVPLEERLAKFG--NVTFHEKLGSQLERIQRIAALAKALAPLVGADPELAERAALYAK 402 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 +DL TE+V EFPE+QG +GK YA L+ A EEH KP+GP + VPT +S+ V+L Sbjct: 403 SDLRTEVVGEFPEVQGLMGKYYARLEGLPEEIALAAEEHYKPQGPTDRVPTAPVSVAVAL 462 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG++R++LEN + + L++F+E +L+ FF Sbjct: 463 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVVRLVLENGLRLKLTEFVE-PDLLAFFA 521 Query: 540 DRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK++L ++ RHDL++A+ P+ D+LL IV ++ L F SS G L KR Sbjct: 522 DRLKVHLREQGARHDLVDAVFALPDQDDLLLIVKRVEALGRFLSSEDGRNLLAGTKRAAN 581 Query: 599 ILAIEEKKNREISLEIS-PQYLLLEAEKRLYA-VISDFGTHIQESMDHKRYHQIGDLLHS 656 IL IEEKK+ I+ E L E E+R A I+D I+ ++ + + L+ Sbjct: 582 ILRIEEKKD-GIAYEGGVDTALFAEPEERALADAIADLRPQIEAALASEDFEGAMALIAR 640 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + P++ FFD+V VN +D+ +R NRL LL I+ + + +I Sbjct: 641 LRAPVDAFFDKVTVNAEDKALRANRLRLLADIRTATRAIADFDRI 685 >gi|27377647|ref|NP_769176.1| glycyl-tRNA synthetase subunit beta [Bradyrhizobium japonicum USDA 110] gi|81841876|sp|Q89S69|SYGB_BRAJA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|27350792|dbj|BAC47801.1| glycyl-tRNA synthetase beta chain [Bradyrhizobium japonicum USDA 110] Length = 699 Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust. Identities = 313/721 (43%), Positives = 441/721 (61%), Gaps = 44/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ ER GP++GA A+ GFL++TGL+++ + +I++DPK GD Y+A++ KP R Sbjct: 61 ARQPDLKTERRGPKMGAPDAAVQGFLKATGLKSLDEAKIQRDPK-GDFYIALIEKPGRDA 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV I+ PWPKSMRW + +W+RPL +I E + ++ + Sbjct: 120 IDVLAEILPVIIRTFPWPKSMRWGARSGKPGSLNWVRPLHAITATFGLETEEPDVVKFAV 179 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP I V+ + Y L +A V+LDPE R++AIL DA +LA A G Sbjct: 180 DGIEAGQTTYGHRFLAPAAINVRRFEDYEAKLLDAKVVLDPERRKDAILTDAKQLAFAQG 239 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV-TRTREGVL 299 +LVED++LL+E+ GLVEW V MGSF++++L P E+IR TI+ NQKCFV + + G L Sbjct: 240 FDLVEDQNLLDEVAGLVEWPVVLMGSFEEEFLATPAEVIRATIRNNQKCFVVSDAKTGKL 299 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FILV+NI+A+DGG I+ GN RV+ ARL DA F++ Sbjct: 300 ANKFILVANIEATDGGKTIIAGNERVIRARLSDAKFFYE--------------------T 339 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + + +VFH ++GTQ R++RI L +IA L+ ADVA RA L+K Sbjct: 340 DLKTKLEDRLPKFEQ--IVFHEELGTQAARITRIERLAAEIAPLVGADVAKTARAAHLAK 397 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +S+ V+L Sbjct: 398 ADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSVAVAL 457 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+I EN + + L + Sbjct: 458 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLIAENTLRLSLMKVAASALAGLSVK 517 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRLK+ L ++ RHDL++A+ D+LL IV + L +F Sbjct: 518 PADVQKLPGDLLTFFADRLKVQLREQGARHDLVDAVFALGGQDDLLMIVRRVDALGKFLE 577 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL--LEAEKRLYAVISDFGTHIQE 640 S G+ L KR IL+IEEKK++ + + +P L L EK L IS+ Sbjct: 578 SDDGKNLLAGTKRASNILSIEEKKDKR-TFDGAPDAALYSLGEEKALAKAISEVQAEASA 636 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 S+ + + + + P++ FFD+V VN DD +VR+NRL LL I++ V + K Sbjct: 637 SVAKEDFAAAMSAMAKLRPPVDAFFDKVRVNDDDPKVRENRLKLLNEIRSATRAVADFSK 696 Query: 701 I 701 I Sbjct: 697 I 697 >gi|115526402|ref|YP_783313.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisA53] gi|115520349|gb|ABJ08333.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisA53] Length = 744 Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust. Identities = 320/765 (41%), Positives = 432/765 (56%), Gaps = 87/765 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L EG++Y+ + + TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQAKAAEDLKRLVTDRLVAEGLVYEGAKAFATPRRLALTIHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++S+ +I+ DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLSEAKIQSDPKKGDFYIALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ E ++ D+ Sbjct: 121 LDVLAEILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIIATFGLETEDPDVVAFDI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ Y L +A V+LDP+ R++ IL DA LA A Sbjct: 181 SGIKAGQVTRGHRFMAPQDFSVRRFADYEAKLYDAKVVLDPQRRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED LL+E+ GLVEW MGSFDK++L +P E+IR TI+ NQKCFV R G L Sbjct: 241 YELVEDPVLLDEVSGLVEWPVALMGSFDKEFLSIPGEVIRATIRNNQKCFVVRDPATGNL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FIL +NI+ASDGGAAI GN RV+ ARL DA F++ Sbjct: 301 APKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYE--------------------T 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + D +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 341 DLKTSLESRLPKFDQ--IVFHEKLGTQAERIARIERLAAEIAPLVGADVEKTKRAARLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VP++ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPTDRVPSDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IR+ILEN I LS+ + Sbjct: 459 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLILENGIRTTLSKCMMFGHKQVSTK 518 Query: 531 ------------------------------------DQNLILFFH--------------- 539 D ++ LF H Sbjct: 519 LFRFSSANFRAHIATILGVLSPDATERVLAAREIDFDTSVALFHHEKGSADTEQLLSFVV 578 Query: 540 DRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK+ L D+ RHDL++A+ D+LL +V ++ L F ++ G+ L KR Sbjct: 579 DRLKVQLRDQGARHDLVDAVFALGGQDDLLMVVRRVEALAAFLATDDGKNLLAGVKRAAN 638 Query: 599 ILAIEEKKNREISLEISPQYLLLEA--EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL IEEKK+ + + +P L + EK L A I ++ + + + Sbjct: 639 ILRIEEKKDSR-AFDGAPDAALYASDEEKALAAAIDQAKVEASSAVAKEDFSAAMSAMAK 697 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FF++V VN DD+ VR+NRL LL I+ V + KI Sbjct: 698 LRPAVDAFFEKVKVNDDDKAVRENRLKLLNEIRAATRAVADFSKI 742 >gi|328544957|ref|YP_004305066.1| glycyl-tRNA synthetase beta subunit [polymorphum gilvum SL003B-26A1] gi|326414699|gb|ADZ71762.1| Glycyl-tRNA synthetase beta subunit [Polymorphum gilvum SL003B-26A1] Length = 695 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 311/722 (43%), Positives = 434/722 (60%), Gaps = 48/722 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ L E G+ Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLKSLVTNALVEAGLTYEGAKAFSTPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA KA++GFLR GL +I + I+ DPKKGD Y+AV+ +P R Sbjct: 61 VASSATREERKGPRVGAPDKALEGFLRGAGLSSIDEATIQTDPKKGDFYVAVIERPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ +P ++ PWPKSMRW W+RPL+SIL E + +I+ ++ Sbjct: 121 IDIIAEAMPGIVRAFPWPKSMRWGAGQ-----LRWVRPLQSILATFGPETEEPEIVRFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF A I+V+ D Y+ LE+ V+LD + R++ IL+DA A A+G Sbjct: 176 DGIVSGDTTRGHRFLADAEIRVRRFDDYMPKLEKHKVVLDADRRKDMILHDARDRALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED+ LLEE+ GLVEW V GSF++ +L +P+E IRLTI+ NQKCFV R + G L Sbjct: 236 LELVEDEGLLEEVAGLVEWPVVLTGSFEEAFLAIPDECIRLTIRANQKCFVLRDPKTGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L SNI +DGG +V GN +V+ ARL DA FW+ Sbjct: 296 ANRFVLTSNIVPADGGKVVVAGNEKVIRARLSDARFFWE--------------------T 335 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L + +LD +VFH K+G+QGERV R+ L ++A L+ AD R L+K Sbjct: 336 DLKTKLADTLPKLD--GIVFHDKLGSQGERVKRLEALAVELAPLVGADTDKARRGAELAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ S AIE+H KP+GP + VPT+ ++I V+L Sbjct: 394 ADLVSAMVYEFPELQGLMGRYYATAQGEDASVATAIEDHYKPQGPSDRVPTDPVAIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 +DKLD L FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + +PL++ I Sbjct: 454 SDKLDLLAGFWAIDEKPTGSKDPYALRRAALGVIRIVLENGLRLPLARLIGAAQSNLGIG 513 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFS 582 ++L+ FF DRLK++L D RHDLI+A+ D+LL IV ++ L F S Sbjct: 514 LSDPDALVEDLLAFFADRLKVHLKDEGARHDLIDAVFALGGQDDLLMIVRRVEALGTFLS 573 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ--YLLLEAEKRLYAVISDFGTHIQE 640 + G L +R IL IEEKK+ +E P +L+ AE +L A I + E Sbjct: 574 TDDGANLLAGYRRAVNILRIEEKKD-GAPVEGRPHADHLVEPAEIQLAAAIDAARAEVGE 632 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + L + P++ FF+++LVN +D VR NRL LL I+++ V + + Sbjct: 633 ALAGEDFEAAMTALAHLRAPVDRFFEEILVNAEDAGVRANRLRLLAEIRDVAGTVADFSR 692 Query: 701 IV 702 + Sbjct: 693 VA 694 >gi|75676770|ref|YP_319191.1| glycyl-tRNA synthetase subunit beta [Nitrobacter winogradskyi Nb-255] gi|74421640|gb|ABA05839.1| glycyl-tRNA synthetase beta chain [Nitrobacter winogradskyi Nb-255] Length = 727 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 310/748 (41%), Positives = 441/748 (58%), Gaps = 70/748 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFVTPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++ GL ++ + +I++DPKKGD Y+A++ +P R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKAAGLTSLDEAKIQRDPKKGDFYVALIERPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL ++PV ++ PWPK MRW + A +W+RPL SI+ E + +++ D+ Sbjct: 121 IDVLAELLPVIVRTFPWPKQMRWGERSAKPGALTWVRPLHSIIATFGMETEEPEVVPFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 +I G T GHRF AP V+ + Y L +A V+LDP+ R++ IL DA LA A G Sbjct: 181 ADITAGQATRGHRFMAPGEFSVRRFEDYEAKLHDAKVVLDPQRRKDIILADAKELAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED+ LL+E+ GLVEW V MGSFDK++L +P E+IR TI+ NQKCFV + G L Sbjct: 241 YELVEDQALLDEVSGLVEWPVVLMGSFDKEFLSIPGEVIRATIRNNQKCFVVNDPKSGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+LV+N++ASDGG AI+ GN RV+ ARL DA F++ Sbjct: 301 ANRFLLVANLEASDGGEAIIAGNERVIRARLADAKFFYE--------------------T 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + + +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 341 DLKTKLEARLPKFEQ--IVFHEKLGTQAERIARIERLAAEIAPLVGADVEKAKRAARLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VP++ +SI V+L Sbjct: 399 TDLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPNDRVPSDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-------FIEDQ 532 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IR+++ N + + L +E+Q Sbjct: 459 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLVVNNGLQLKLRHITAEALNLLEEQ 518 Query: 533 ------------------------------------NLILFFHDRLKLYLHDRDIRHDLI 556 +L++FF DRLK+ L ++ RHDL+ Sbjct: 519 KPDLVGEARQRWLNQYGGSHSIEAALESAVAAVFVKDLLIFFADRLKVQLREQGARHDLV 578 Query: 557 EAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 +A+ E D+LL IV ++ L +F + G+ L KR ILAIEEKK++ S + + Sbjct: 579 DAVFALEGQDDLLMIVRRVEALGKFLDTDDGKNLLSGTKRASNILAIEEKKDKR-SFDGA 637 Query: 616 PQYLL--LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 P L L EK L A I ++ + + + + ++ FF+QV VN Sbjct: 638 PDASLYTLGEEKALGAAIDQVKREASAAVATEDFAAAMSAMAKLRPAVDAFFEQVKVNDA 697 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 D ++R+NRL LL I+ V + KI Sbjct: 698 DPKIRENRLRLLNEIRAATRTVADFSKI 725 >gi|148253849|ref|YP_001238434.1| glycyl-tRNA synthetase subunit beta [Bradyrhizobium sp. BTAi1] gi|229470695|sp|A5EED4|SYGB_BRASB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146406022|gb|ABQ34528.1| glycyl-tRNA synthetase beta chain [Bradyrhizobium sp. BTAi1] Length = 701 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 313/722 (43%), Positives = 434/722 (60%), Gaps = 44/722 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAAEDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG AI GFL++TGL ++ + I++DPKKGD Y+A++ KP R Sbjct: 61 ARQADLKEERKGPRVGGPDAAIQGFLKATGLSSLEEATIQRDPKKGDFYVALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL ++PV ++ PWPKSMRW A +W+RPL +I E + ++ + Sbjct: 121 LDVLAEMLPVIVRTFPWPKSMRWGKRSEKPGALNWVRPLHAITATFGLETEEPDVVSFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP I V+ + Y L +A V+LDP+ R++ I+ DA +LA A G Sbjct: 181 DGIEAGQTTYGHRFMAPAAISVRRFEDYEAKLLDAKVVLDPQRRKDTIVTDAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED LL+E+ GLVEW V MGSFD +YL +P E+IR TI+ NQKCFV R + G L Sbjct: 241 YELVEDPVLLDEVSGLVEWPVVLMGSFDPEYLKVPAEVIRATIRNNQKCFVVRDPKTGGL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FIL +NI+A+DGG I+ GN RV+ ARL DA F++ Sbjct: 301 APKFILTANIEATDGGKTIIAGNERVIRARLSDAKFFYE--------------------T 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + + +VFH K+GTQ R++RI L +IA L+ AD A RA L+K Sbjct: 341 DLKTRLEDRLPKFEQ--IVFHEKLGTQAARIARIEKLAAEIAPLVGADAAKTARAAKLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E++S A EEH KP+GP + VPT+ +S+ V+L Sbjct: 399 ADLLTEVVGEFPEVQGLMGKYYALAQGEDVSVAAACEEHYKPQGPGDRVPTDPVSVAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+I EN + + L Q Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLITENSLRLSLLQVAGSALAGLHVK 518 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 +L+ FF DRLK+ L ++ RHDL++A+ D+LL +V ++ L +F Sbjct: 519 SELDAGKLSADLLSFFADRLKVQLREQGARHDLVDAVFALGGQDDLLMVVRRVEALGKFL 578 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL--LEAEKRLYAVISDFGTHIQ 639 + G+ L KR ILAIEEKK++ + +P L L+ EK L I + G+ Sbjct: 579 ETDDGKNLLAGTKRASNILAIEEKKDKR-KFDGAPDAALYRLDEEKALAKAIGEVGSEAG 637 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + + + ++ FFD+V VN DD +R+NRL LL I+N V + Sbjct: 638 TAVAKEDFAAAMHAMAKLRPAVDAFFDKVKVNDDDAAIRENRLKLLNEIRNATRAVADFS 697 Query: 700 KI 701 KI Sbjct: 698 KI 699 >gi|90425820|ref|YP_534190.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisB18] gi|90107834|gb|ABD89871.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisB18] Length = 728 Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust. Identities = 319/749 (42%), Positives = 427/749 (57%), Gaps = 71/749 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L EG++Y + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAAEDLRRMVTDKLVAEGLVYDGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG AI GFL++TGL ++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQSDLKEERKGPRVGGPDAAIQGFLKATGLASLDEAKIQRDPKKGDFYIALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ + ++ D+ Sbjct: 121 LDVLADILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIVATFGIDTEDPDVVAFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V+ + Y L +A V+LDP+ R++ IL+DA LA A Sbjct: 181 SGIKAGQVTRGHRFMAPGEISVRRFEDYDAKLFDAKVVLDPQRRKDIILHDARTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGVL 299 ELVED LL+E+ GLVEW MGSFD +L +P E+IR TI+ NQKCF V+ G L Sbjct: 241 FELVEDPVLLDEVSGLVEWPVALMGSFDPAFLAIPGEVIRATIRNNQKCFVVSDPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N FIL +NI+ASDGG AIV GN RV+ ARL DA F++ Sbjct: 301 TNKFILTANIEASDGGKAIVAGNERVIRARLSDAKFFYE--------------------T 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 341 DLKTKLEDRLPKF--AQIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKARRAAQLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VP++ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPNDRVPSDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------DQ- 532 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IR+ILEN I L E DQ Sbjct: 459 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLILENNIRPNLISAFEGHSSAVDQT 518 Query: 533 -------------------------------------NLILFFHDRLKLYLHDRDIRHDL 555 +L+ FF DRLK+ L ++ RHDL Sbjct: 519 TMRIAQTKAKSSGGFSLVLNAHSTQSWNDRQTRTTSVDLLSFFADRLKVQLREQGARHDL 578 Query: 556 IEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 ++A+ E D++L IV ++ L F ++ G+ L KR IL IEEKK+ + + Sbjct: 579 VDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLAGVKRAANILRIEEKKDAR-AFDG 637 Query: 615 SPQYLLLEA--EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 +P L A EK L I ++ + + + + ++ FFD+V VN Sbjct: 638 APDASLYVADEEKTLATAIDQVKLEASSAVAREDFAAAMSAMAKLRPAVDAFFDKVKVND 697 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD VRDNRL LL I+ V + KI Sbjct: 698 DDARVRDNRLKLLNEIRAATRAVADFSKI 726 >gi|254504740|ref|ZP_05116891.1| glycyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] gi|222440811|gb|EEE47490.1| glycyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] Length = 695 Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust. Identities = 309/721 (42%), Positives = 427/721 (59%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L + G+ Y+ + + TP RL L++ G+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAEDLKTLVTNALVDAGLPYEGAKAFATPRRLALHVAGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA++GFLR GL +I D I+ DPKKGD Y+AV+ KP R Sbjct: 61 AGSAATREERKGPRVGAPEKAVEGFLRGAGLASIDDATIQTDPKKGDFYVAVIEKPGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ +P ++ PWPKSM+W TT + W+RPL SI+ E + ++ + Sbjct: 121 IDIIAEFMPGILRNFPWPKSMKWGTTST-----RWVRPLHSIIATFGPETEEPDVVPFEF 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF A V+ D Y LE+ V+LD + R++ IL DA A A+G Sbjct: 176 DGIKSGKTTRGHRFLADVAFDVRRFDDYAPALEKHKVVLDADRRKDIILADAKDRALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED LLEE+ GLVEW V GSFD+ +L +P+E I+LTIK NQKCFV + + G L Sbjct: 236 LELVEDPGLLEEVAGLVEWPVVLTGSFDEAFLEIPDECIQLTIKVNQKCFVLKDPKTGKL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L+SNI A D G I+ GN +V+ ARL DA FW D LK NL Sbjct: 296 ANKFVLISNIVAPDDGKLIIAGNEKVIRARLSDAQFFWTSD--------------LKTNL 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + P + DV FH K+G+ GERV R+ L ++A L+ AD A R L+K Sbjct: 342 TDNLP--------KLNDVKFHEKLGSVGERVQRLIALSAELAPLVGADEAKAKRGAELAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ S AIEEH KP+GP ++VP + ++I V+L Sbjct: 394 ADLVSAMVFEFPELQGLMGRYYATAQGEDASVATAIEEHYKPQGPSDSVPADPVAIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---------- 529 A+KLD L FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + + L + I Sbjct: 454 AEKLDLLTGFWAIDEKPTGSKDPYALRRAALGVIRIVLENNLRLKLGELILSALKAQSAI 513 Query: 530 -EDQ-----NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFS 582 +D+ +L+ FF DRLK++L D +RHDLI+A+ + D+LL +V ++ L +F S Sbjct: 514 ADDEAALVADLLSFFADRLKVHLKDEGMRHDLIDAVFALDGQDDLLMVVKRVEALQKFVS 573 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G KR IL EEKK+ ++ + +L +AE L I E+ Sbjct: 574 SDDGTNLAAGYKRAVNILKAEEKKDGTPVTGKPHADHLSEQAEIDLAVAIDTARAEAAEA 633 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + L + P++ FF+ +LVN DD +R NRL LL I++ +V + K+ Sbjct: 634 VKSENFEGAMEALSKLRAPVDRFFEDILVNADDPALRMNRLQLLAEIRDATHVVADFSKV 693 Query: 702 V 702 Sbjct: 694 A 694 >gi|240139847|ref|YP_002964324.1| glycine tRNA synthetase, beta subunit [Methylobacterium extorquens AM1] gi|240009821|gb|ACS41047.1| glycine tRNA synthetase, beta subunit [Methylobacterium extorquens AM1] Length = 696 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 311/689 (45%), Positives = 420/689 (60%), Gaps = 37/689 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 +I G +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DDITAGTVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 L+LVED LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R + L Sbjct: 241 LDLVEDDGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGGAAI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGAAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L K+IA L+ AD AL +RA L+K Sbjct: 343 --ATKLEDRLPKLD--SIVFHEKLGTQGERVARIAALAKEIAPLVGADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADKLDTL FW+I+EKP+GSKDP+ALRRA LG+IR ++E + + L+ ++ + Sbjct: 459 ADKLDTLAGFWSIDEKPTGSKDPFALRRAALGVIRAVIERSLRLSLASLLKGRFASGSDE 518 Query: 533 ---NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEK 588 +L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L EF S+ G+ Sbjct: 519 RTADLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLLVVRRVEALGEFLSTDDGKN 578 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L KR IL IEEKK+ E L + A+ QE+ Sbjct: 579 LLAGYKRAANILRIEEKKDGRAYDEAPDAALAASGQPEERALAEALAAARQEASAAVAAE 638 Query: 649 QIGDLLHSICE---PIEIFFDQVLVNVDD 674 + ++ P++ FF++V VN DD Sbjct: 639 DFAGAMRALSRLRAPVDAFFEKVTVNADD 667 >gi|170740976|ref|YP_001769631.1| glycyl-tRNA synthetase subunit beta [Methylobacterium sp. 4-46] gi|238688003|sp|B0UNU2|SYGB_METS4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|168195250|gb|ACA17197.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium sp. 4-46] Length = 704 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 313/725 (43%), Positives = 425/725 (58%), Gaps = 47/725 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLRKLVTDALVERGFLYEGAKAFSTPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVGA + A+ GFL+S GL ++ ++ DPKKG+ Y+AV+ +P R Sbjct: 61 VRGQDVREERKGPRVGAPEAAVQGFLKSAGLASLDQARVVADPKKGEFYVAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + A W+RPL +I+ E + + + Sbjct: 121 LDVLAEILPAIIRAFPWPKSMRWGAASAEPGALRWVRPLHAIVATFGPETETPERVPFRV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF +P PI+V+ Y+ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGIEAGFTTYGHRFLSPGPIEVRRFADYLPALERAKVVLDADRRKDIILHDARDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT------ 294 L+LVED+ LLEE+ GLVEW MG+FD +L +P E+IR TI+ NQKCFV R Sbjct: 241 LDLVEDEGLLEEVAGLVEWPVTLMGAFDASFLDIPPEVIRATIRANQKCFVLRAPAADPA 300 Query: 295 ---REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 RE LAN FILVSN+ ASDGGAAIV GN RVV ARL DA FW+ D+ Sbjct: 301 AKGRE-RLANAFILVSNLAASDGGAAIVAGNERVVRARLSDAKFFWETDRK--------- 350 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 PL +R+ +LD D+VFH K+GTQ RV RI L + A ++ AD A Sbjct: 351 -----------IPLAERLPKLD--DIVFHEKLGTQAARVGRIAALARAFAPVVGADPAEA 397 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA L+KADL TE+V EFPELQG +G+ YA LQ E + AIEEH KP GP + VPT Sbjct: 398 ERAARLAKADLVTEMVGEFPELQGLMGRYYAELQGEPEAVAAAIEEHYKPLGPGDRVPTG 457 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-------------E 518 +S+ V+LADKLDTL+ FW+++EKP+GSKDPYALRRA LG+IR++L Sbjct: 458 PVSVAVALADKLDTLVGFWSVDEKPTGSKDPYALRRAALGVIRLVLGAGARLPLLPALAA 517 Query: 519 NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHL 577 + +L+ FF DRLK++L D+ RHDLI+A+ P D+LL +V ++ L Sbjct: 518 AAGGHGAAPGGFAADLLGFFADRLKVHLRDQGARHDLIDAVFALPGQDDLLLVVRRVEAL 577 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGT 636 + G L +R IL IEEKK+ R P L E L ++ Sbjct: 578 GRLLDTEDGTNLLAGYRRAANILRIEEKKDGRAHDGAPDPARFALPEETALAEALAAARG 637 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + ++ + + L + P++ FFD+V VN +D +R+NRL+LL ++ L V Sbjct: 638 AAERAVAAEDFEGAMRALAGLRAPVDAFFDKVTVNAEDPAMRENRLALLGALRTATLAVA 697 Query: 697 NVQKI 701 + +I Sbjct: 698 DFSRI 702 >gi|218531348|ref|YP_002422164.1| glycyl-tRNA synthetase subunit beta [Methylobacterium chloromethanicum CM4] gi|254781856|sp|B7KUK7|SYGB_METC4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218523651|gb|ACK84236.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium chloromethanicum CM4] Length = 696 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 311/689 (45%), Positives = 418/689 (60%), Gaps = 37/689 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGITAGMVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R + L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGGAAI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGAAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L +IA L+ AD AL +RA L+K Sbjct: 343 --ATKLEDRLPKLD--SIVFHEKLGTQGERVARIAALAAEIAPLVAADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFIEDQ-- 532 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR ++E + + L +F+ Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRAVIERSLRLSLASLLKGRFVSGSDE 518 Query: 533 ---NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEK 588 +L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L F ++ G+ Sbjct: 519 RTADLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLMVVRRVEALGAFLATDDGKN 578 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L KR IL IEEKK+ E L + A+ QE+ Sbjct: 579 LLAGYKRAANILRIEEKKDGRAYDEAPDAALAASGQPEERALAEALAAARQEASAAVAAE 638 Query: 649 QIGDLLHSICE---PIEIFFDQVLVNVDD 674 + ++ P++ FF++V VN DD Sbjct: 639 DFAGAMRALSRLRAPVDAFFEKVTVNADD 667 >gi|307941588|ref|ZP_07656943.1| glycyl-tRNA synthetase, beta subunit [Roseibium sp. TrichSKD4] gi|307775196|gb|EFO34402.1| glycyl-tRNA synthetase, beta subunit [Roseibium sp. TrichSKD4] Length = 697 Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust. Identities = 311/729 (42%), Positives = 435/729 (59%), Gaps = 60/729 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE +SEEIPARMQ +AAEDL ++ L + G+ Y+ + Y+TP RL L++ G+ Sbjct: 1 MPDLLLEFFSEEIPARMQRRAAEDLKSLVTNALVDAGLPYEGAKAYFTPRRLALHVAGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA++GFLR GL +I + ++ DPKKGD Y+AV+ KP R Sbjct: 61 AGSAATREERKGPRVGAPEKAVEGFLRGAGLSSIDEVSVQTDPKKGDFYVAVIEKPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D++ +P ++ PWPKSM+W + + W+RPL SI+ E + +II+ ++ Sbjct: 121 KDIIAGFMPGIVRNFPWPKSMKWGS-----GSMRWVRPLHSIIATFGPETEEPEIIEFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF + V+ +D Y LE+ V+LD + R++ ILNDA A A+G Sbjct: 176 DGITSGNTTRGHRFLGDEVLTVRRMDDYAAQLEKHKVVLDADRRKDIILNDAKDRALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED LLEE+ GLVEW V GSFD+K+L +P+E RLTI+ NQKCFV + + G L Sbjct: 236 LELVEDLGLLEEVAGLVEWPVVLTGSFDEKFLEIPDECTRLTIRVNQKCFVMKDPKTGKL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSLKESA 354 A FILVSNI + D G IV GN +V+ ARL DA FW+ D +NLP L S Sbjct: 296 AKKFILVSNITSPDDGKLIVAGNEKVIRARLSDAWFFWETDLKTQLADNLPKLDS----- 350 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +VFH K+GTQGERV R+ L ++A ++ AD RA Sbjct: 351 ----------------------IVFHEKLGTQGERVKRLEALASELAPIVGADKDKAVRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+KADL +++V EFPELQG +G+ YA Q E+ S AIE+H +P+GP ++VPT+ ++ Sbjct: 389 ARLAKADLVSQMVYEFPELQGLMGRTYASKQGEDESVAIAIEDHYRPQGPSDSVPTDPVA 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 + V+LADKLD L FWAI+EKP+GSKDP+ALRRA LG+IRI+LENK+ +PL+Q ++ Sbjct: 449 VAVALADKLDLLAGFWAIDEKPTGSKDPFALRRAALGVIRIVLENKLRLPLAQQLKASLY 508 Query: 533 ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIK 575 +L+ FF DRLK++L D RHDLI+A+ D+LL +V ++ Sbjct: 509 KIKPDLNNEAAEELVTDLLSFFADRLKVHLKDEGARHDLIDAVFALGGQDDLLMVVKRVE 568 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL--EAEKRLYAVISD 633 L F SS G KR IL EEKK+ +E P LL +AE L A I Sbjct: 569 ALGAFVSSYDGANLAAGYKRAVNILRAEEKKD-GAPVEGRPHADLLQEQAEIDLAAAIDT 627 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + ++ ++ + + L + P++ FF+ +LVN DD +R NRL LL I++ Sbjct: 628 ARAAAENAVANEDFEEAMAALSKLRAPVDKFFEDILVNADDPALRKNRLQLLAEIRDATH 687 Query: 694 IVINVQKIV 702 +V + K+ Sbjct: 688 VVADFSKVA 696 >gi|118590816|ref|ZP_01548217.1| glycyl-tRNA synthetase subunit beta [Stappia aggregata IAM 12614] gi|118436792|gb|EAV43432.1| glycyl-tRNA synthetase subunit beta [Stappia aggregata IAM 12614] Length = 695 Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust. Identities = 305/721 (42%), Positives = 419/721 (58%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L + G+ Y+ + + TP RL L++ G+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAEDLKSLVTNALVDAGLPYEGAKAFATPRRLALHVAGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA++GFLR GL +I I+ DPKKGD Y+AV+ KP R Sbjct: 61 AGSAATREERKGPRVGAPEKALEGFLRGAGLTSIDQATIQTDPKKGDFYVAVIEKPGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ +P ++ PWP +MRW + W+RPL SI+ E + ++ + Sbjct: 121 IDVIAEFMPGILRNFPWPITMRWGAATT-----RWVRPLHSIVATFGPETEEPDVVSFEF 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF A V+ D Y LE+ V+LD + R++ I NDA A A+G Sbjct: 176 DGIKAGKTTRGHRFLADEAFDVRRFDDYAPALEKHKVVLDADRRKDIIQNDAKDCALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 L+LVED LLEE+ GLVEW V GSFD+ +L +P+E I+LTIK NQKCFV + G L Sbjct: 236 LDLVEDPGLLEEVAGLVEWPVVLTGSFDEDFLTIPDECIQLTIKVNQKCFVLKNPATGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L+SNI A DGG IV GN +V+ ARL DA FW+ Sbjct: 296 ANKFVLISNIIADDGGKLIVAGNEKVIRARLSDARFFWE--------------------T 335 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L + +LD +V FH K+G+ GERV R+ L ++A + AD RA L+K Sbjct: 336 DLKSKLSDNLPKLD--EVKFHEKLGSVGERVKRMIALSAELAPVAGADETKAKRAAELAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ S AIEEH KP+GP ++VPT+ +++ V+L Sbjct: 394 ADLVSNMVFEFPELQGLMGRYYATAQGEDASVATAIEEHYKPQGPSDSVPTDPVAVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 A+KLD L FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + I L + Sbjct: 454 AEKLDLLAGFWAIDEKPTGSKDPYALRRAALGVIRIVLENNLRIRLGDILRSALDLQGVK 513 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFS 582 +L+ FF DRLK++L D RHDLI+AI E D++L +V ++ L +F S Sbjct: 514 TADPAALVADLLSFFADRLKVHLRDEGARHDLIDAIFALEGQDDVLMVVRRVEALGKFVS 573 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G L KR IL EEKK+ +S + P + +AE L A I ++ Sbjct: 574 SDDGTNLLAGYKRAVNILKAEEKKDGAAVSGKPHPDHFQEQAEIDLAAAIDVARAEAADA 633 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + L + P++ FF +LVN +D +R NRL LL I++ +V + K+ Sbjct: 634 VASENFEGAMEALSKLRAPVDRFFVDILVNAEDATLRMNRLQLLAEIRDATHVVADFSKV 693 Query: 702 V 702 Sbjct: 694 A 694 >gi|163852512|ref|YP_001640555.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] gi|163664117|gb|ABY31484.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] Length = 726 Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust. Identities = 313/719 (43%), Positives = 417/719 (57%), Gaps = 67/719 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ Y AV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYHAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGITAGTVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R + L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGG AI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGTAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L K+IA L+ AD AL +RA L+K Sbjct: 343 --ATKLEDRLPKLD--SIVFHEKLGTQGERVARIAALAKEIAPLVGADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---------- 529 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+ R++L + I L + Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVTRLVLTSNSRIHLIELAKKLVGVFEKS 518 Query: 530 --ED----------------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI 559 ED +L+ FF DRLK+YL D+ RHDLI+A+ Sbjct: 519 ISEDSIWRVTAASSEEFATKPFDREEMLAMIASDLLAFFADRLKVYLRDQGARHDLIDAV 578 Query: 560 LR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY 618 P D+LL +V ++ L EF S+ G+ L KR IL IEEKK+ E Sbjct: 579 FALPGQDDLLLVVRRVEALGEFLSTDDGKNLLAGYKRAANILRIEEKKDGRAYDEAPDAA 638 Query: 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDD 674 L + A+ QE+ + ++ P++ FF++V VN DD Sbjct: 639 LAASGQPEERALAEALAAARQEASAAVAAEDFAGAMRALSRLRAPVDAFFEKVTVNADD 697 >gi|254562265|ref|YP_003069360.1| glycine tRNA synthetase subunit beta [Methylobacterium extorquens DM4] gi|254269543|emb|CAX25509.1| glycine tRNA synthetase, beta subunit [Methylobacterium extorquens DM4] Length = 696 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 307/689 (44%), Positives = 418/689 (60%), Gaps = 37/689 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGITADTVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R + L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGG AI GN RVV ARL DA FW+ D+ A++ Sbjct: 301 APAFVLVSNLIASDGGVAITAGNERVVRARLSDARFFWETDK------------AVR--- 345 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L+ R+ +LD +VFH K+GTQGERV+RI L K+IA L+ D AL +RA L+K Sbjct: 346 -----LEDRLPKLD--SIVFHEKLGTQGERVARIAALAKEIAPLVGTDPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADKLDTL FW+I+EKP+GSKDP+ALRRA LG+IR ++E + + L+ ++ + Sbjct: 459 ADKLDTLAGFWSIDEKPTGSKDPFALRRAALGVIRAVIERSLRLSLASLLKGRFASGSDE 518 Query: 533 ---NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEK 588 +L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L F ++ G+ Sbjct: 519 RTADLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLMVVRRVEALGAFLATDDGKN 578 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L KR IL IEEKK+ E L + A+ QE+ Sbjct: 579 LLAGYKRAANILRIEEKKDGRAYDEAPDAGLAASGQPEERALAEALAAARQEASAAVAAE 638 Query: 649 QIGDLLHSICE---PIEIFFDQVLVNVDD 674 + ++ P++ FF++V VN DD Sbjct: 639 DFAGAMRALSRLRAPVDAFFEKVTVNADD 667 >gi|170747570|ref|YP_001753830.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] gi|238688771|sp|B1M1W2|SYGB_METRJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170654092|gb|ACB23147.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] Length = 699 Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust. Identities = 310/698 (44%), Positives = 417/698 (59%), Gaps = 42/698 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L G +Y+ R + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVARGFLYEGARAFSTPRRLALHIAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+ GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKGAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL +P ++ PWPKSMRW + + W+RPL+SI+ E ++I + + Sbjct: 121 LDVLAEFLPEIVRSFPWPKSMRWGAASAEPGSLRWVRPLQSIVATFGPETETPEVIPVSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +TYGHRF AP I+V+ D YI+ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 GGIAAGTVTYGHRFLAPEAIEVRRFDDYIQALERAKVVLDADRRKDVILHDARDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-- 298 L+LVED+ LLEE+ GLVEW V MGSFD+ +L +P E IR TI+ NQKCFV R + G Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGSFDESFLDIPAEAIRATIRANQKCFVLR-KGGSED 299 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FILVSN+ A+DGG AI GN RVV ARL DA FW+ D+ Sbjct: 300 LAPAFILVSNLVATDGGQAITAGNERVVRARLSDAKFFWETDKATR-------------- 345 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L+ R+ +LD +VFH K+GTQGER++RI L K +A + AD AL +RA L+ Sbjct: 346 ------LEDRLPKLDA--IVFHEKLGTQGERIARIAALAKDLAPRVGADPALAERAARLA 397 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA LQ E+ S C AIEEH KP GP + VPT+ +SI V+ Sbjct: 398 KADLVTEMVGEFPELQGLMGRKYAALQGEHDSVCAAIEEHYKPLGPSDRVPTDPVSIAVA 457 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LADKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR+IL+ + + L + + Sbjct: 458 LADKLDTLAGFWAIDEKPTGSKDPFALRRAALGVIRLILDRGLRLRLLEQVGAADRSLAG 517 Query: 530 ----EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSA 584 + ++L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L F + Sbjct: 518 RAGADARDLLGFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLMVVRRVEALAAFLDTE 577 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH---IQES 641 G+ L KR IL IEEKK+ L E A+ + Sbjct: 578 DGKNLLAGYKRAANILRIEEKKDGRAYDAAPDAALAAAGEPAERALAEALAKARETASAA 637 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + + + L ++ P++ FF V VN D ++R+ Sbjct: 638 VAREDFSGAMQALSTLRAPVDAFFQDVTVNAPDPKLRE 675 >gi|188582530|ref|YP_001925975.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] gi|179346028|gb|ACB81440.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] Length = 724 Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust. Identities = 309/718 (43%), Positives = 420/718 (58%), Gaps = 67/718 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELLSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGDAVREERRGPRVGAPEAAVQGFLKSAGLSSLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E ++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPDVVPFAV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T GHRF +P P +V+ D Y+ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 EGISAGTTTRGHRFLSPEPFEVRRFDDYVPALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R + L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSEEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGGAAI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFLLVSNLVASDGGAAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDRAIVL 417 + L+ R+ +LD +VFH K+GTQGERV+RI L ++IA ID D+ LV+RA L Sbjct: 343 --ATKLEDRLPKLDA--IVFHEKLGTQGERVARIAGLARRIASDIDVQFDLDLVERAARL 398 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G++YA LQ E+ AIEEH KP GP + VPT +SI V Sbjct: 399 AKADLVTEMVGEFPELQGLMGRKYATLQGEDPRVAAAIEEHYKPLGPSDRVPTEIVSIAV 458 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP------------- 524 ++ADKLD L FW+I+EKP+GSKDP+ LRRA LG+IR+ILEN + +P Sbjct: 459 AMADKLDLLAGFWSIDEKPTGSKDPFGLRRAALGVIRLILENGLRLPLLDGPIWDAFDEL 518 Query: 525 ---------------LSQFIED--------QNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 L ED ++L+ FF DRLK+YL D+ RHDLI+A+ Sbjct: 519 PGKSVAILDLSSVAALDALDEDTELTDPRAKDLLAFFADRLKVYLRDQGARHDLIDAVFA 578 Query: 562 -PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 P D+LL +V ++ L F ++ G+ L KR IL IEEKK+ + + P L Sbjct: 579 LPGQDDLLLVVRRVEALGAFLATDDGKNLLAGYKRAANILRIEEKKDGR-AYDAEPDAAL 637 Query: 621 LEA----EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 + E+ L ++ ++ + + L + P++ FF++V VN DD Sbjct: 638 AASGEPEERALAEALTATREEASAAVAAEDFSGAMRALSRLRAPVDAFFEKVTVNADD 695 >gi|323139039|ref|ZP_08074098.1| glycyl-tRNA synthetase, beta subunit [Methylocystis sp. ATCC 49242] gi|322395699|gb|EFX98241.1| glycyl-tRNA synthetase, beta subunit [Methylocystis sp. ATCC 49242] Length = 725 Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust. Identities = 316/742 (42%), Positives = 428/742 (57%), Gaps = 63/742 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+DL ++ L E G+ Y+ Y TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQRQAADDLRRLVTNALVERGLTYEGASAYATPRRLALQVVGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EER GPRVGA AI GFL+S GL ++ +I+KD K + YLAV+ +P Sbjct: 61 GRQPDVREERKGPRVGAPDAAIQGFLKSAGLASLDQARIEKDKKGAEFYLAVIERPGAET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL I+P ++ PWPKSMRW + W+RPL SI+ E ++ ++ Sbjct: 121 IQVLAEILPGIVKGFPWPKSMRWGAASERTDSLRWVRPLHSIVATFGPETETPDVVPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T+GHRF AP I V+ + Y LE A V++DPE RR+ IL+DA LA A G Sbjct: 181 DGIIAGNTTHGHRFMAPAAIHVKRFEDYAMSLERARVVIDPERRRDIILHDAKDLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LLEE+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV R ++G L Sbjct: 241 LELVEDAGLLEEVAGLVEWPVTLMGSFDESFLSIPPEVIRATIRVNQKCFVLR-KDGKLT 299 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSNI+ASD GA IV GN RV+AARL DA F++ D Sbjct: 300 NRFILVSNIEASDHGATIVAGNQRVIAARLSDAKFFYE--------------------TD 339 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L L+ R+ +LD +VFH K+GTQGERV RI L +++A ++ AD RA L KA Sbjct: 340 LKTKLEDRLPKLDQ--IVFHEKLGTQGERVKRIAALARELAPIVGADPDKAARAATLCKA 397 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA Q E+ S +A EH KP+G + P + +SI V+LA Sbjct: 398 DLVSEMVGEFPELQGLMGSYYASAQGEDPSVANACYEHYKPQGQGDYAPKDPVSIAVALA 457 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRIILEN++ + + Q Sbjct: 458 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIILENELRLQALPIFDCQYNVFSFHG 517 Query: 533 ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE------------- 563 +L+ FF DRLK+YL D+ R+DLI+A L Sbjct: 518 KTLKETSEGMVGTSAISLLEFFIDRLKVYLRDKGARYDLIDAALGAVAFDESEEETASAA 577 Query: 564 -NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN--REISLEISPQYLL 620 D+LL I ++ L++F ++ G+ L KR IL EEKK+ R +P + Sbjct: 578 LQDDLLMITKKVEALDKFLATDDGKNLLAGYKRAVNILKAEEKKDGPRAYYHRHAPNLRV 637 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 E +L A I+ E ++ + + L + +P++ FF+ V VN D+ ++R N Sbjct: 638 EPQEHKLAAAIARAREETTEKLEKEDFAGAMRSLAKLRDPVDAFFEHVTVNADNADLRLN 697 Query: 681 RLSLLQYIKNIILIVINVQKIV 702 RL LL ++ +++ V + KI Sbjct: 698 RLRLLAELRRVMMGVADFGKIA 719 >gi|316932589|ref|YP_004107571.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris DX-1] gi|315600303|gb|ADU42838.1| glycyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris DX-1] Length = 746 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 308/767 (40%), Positives = 425/767 (55%), Gaps = 89/767 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ I+PV ++ PWPKSMRW + A W+RPL SI+ + + ++ ++ Sbjct: 121 IEVIAEILPVIVRTFPWPKSMRWGARSAKPGALQWVRPLHSIVATFGIDTEEPDVVHFNV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP +V+ + Y L A V+LDP+ RR+ IL DA LA A Sbjct: 181 DGIEAGQTTRGHRFMAPDAFEVRRFEDYEAKLFAAKVVLDPQRRRDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED LL+E+ GLVEW MGSFDK +L +P+E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDAGLLDEVSGLVEWPVPLMGSFDKDFLSIPDEVIRATIRANQKCFVVADPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA F++ Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYE--------------------T 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + D +VFH K+GTQ ER+ RI L +IA L+ ADV RA L K Sbjct: 341 DLKTKLEDRLPKFDQ--IVFHEKLGTQAERIERIERLAAEIAPLVGADVEKTKRAAKLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI-----DIPLSQFIEDQNL 534 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+I++NK+ D+ F + Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLIVDNKLRLNIFDLSARPFARNAKA 518 Query: 535 ILFFHDRLKLYLHDR------------------DIRH------DLIEAILRPENDNLLT- 569 +LF R + L R R+ DL+ +R +LL+ Sbjct: 519 VLFDEFRAAMELVQRVEDELPPGTIISISELATAFRYRQIAEADLVAGQMRKAALDLLSF 578 Query: 570 ---------------------------------IVDLIKHLNEFFSSAKGEKFLLSAKRI 596 IV ++ L F ++ G+ L KR Sbjct: 579 FADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLAGTKRA 638 Query: 597 FQILAIEEKKNREISLEISPQYLLL--EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 IL IEEKK+ + + +P L + E+ L A I ++ + + + Sbjct: 639 ANILRIEEKKDGR-AFDGAPDASLYAQDEERALAAAIDRAKAEAGAAVAKEDFAAAMTAM 697 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 698 AGLRPAVDAFFDKVTVNADDKAVRENRLKLLNEIRAATRAVADFSKI 744 >gi|296445406|ref|ZP_06887364.1| glycyl-tRNA synthetase, beta subunit [Methylosinus trichosporium OB3b] gi|296257167|gb|EFH04236.1| glycyl-tRNA synthetase, beta subunit [Methylosinus trichosporium OB3b] Length = 778 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 272/580 (46%), Positives = 371/580 (63%), Gaps = 30/580 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+DL ++ G L E G+ Y+ + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRQAADDLQRLVCGALAERGLAYEGAASHATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRVGA + AI GFL+S GL +I + +I+KDPKKG+ Y+AV+ + R Sbjct: 61 ARQPDVREEKKGPRVGAPEAAIAGFLKSAGLASIDEAKIEKDPKKGEFYVAVIERAGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL ++P ++ PWPKSMRW + + + W+RPL+SIL E +++ + Sbjct: 121 IQVLADVLPGVVKGFPWPKSMRWGAASAKLDSLRWVRPLQSILATFGPETETPEVVRFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+ +GHRF AP V+ D Y LE+A V+LD RR+ +L+DA LA A G Sbjct: 181 DGIESGNVAFGHRFMAPQGFSVRRFDDYAPALEKAKVVLDAARRRDIVLHDARTLAMAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LLEE+ GLVEW MG+FD+ +L +P E+IR TI+ NQKCFV + +G LA Sbjct: 241 LELVEDAALLEEVAGLVEWPVTLMGAFDESFLSIPPEVIRATIRVNQKCFVLKRADGGLA 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILV+N++A+DGGA IV GN RV+AARL DA F++ D Sbjct: 301 NKFILVANVEANDGGATIVGGNQRVIAARLSDAKFFYE--------------------TD 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L L++R+ +LD ++VFH K+GTQGERV+RI L +++A LI AD +RA L+KA Sbjct: 341 LKTKLEERLPKLD--NIVFHEKLGTQGERVARIAALARELAPLIGADADKAERAARLAKA 398 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G+ YA Q E+ A+E+H KP+GP + +PTN +SI V+LA Sbjct: 399 DLVTEMVGEFPELQGLMGRYYARAQGEDADVAAALEDHYKPQGPNDRIPTNPVSIAVALA 458 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRI LE+++ +PL ++F Sbjct: 459 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIALESELRLPLRDAFAAAQATIWFDA 518 Query: 541 RLKLYLHDRDIRHDLIEAI---LRPENDNLLTIVDLIKHL 577 R L RD+ +E + L P L+ D + HL Sbjct: 519 RTPL----RDLVTSEVERVGCDLSPTGAASLS-ADALTHL 553 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 14/184 (7%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN------------DNLLTIVDLIKHLNEF 580 +L+ FF DRLK+YL DR R+DLI+A L D+LLTI ++ L +F Sbjct: 595 DLLAFFIDRLKVYLRDRGARYDLIDAALGASASAQVREGSAKMPDDLLTITRKVEALAKF 654 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS--PQYLLLEAEKRLYAVISDFGTHI 638 + G+ L +R IL IEEKK+ + + P + + E +L A + Sbjct: 655 LDTDDGKNLLAGFRRAANILKIEEKKDGAGAYDTPHHPNLRMEQPEHKLAAAVKRAREET 714 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 E ++ + + L + EP++ FFDQV VN +D ++R NRL LL ++ +L V + Sbjct: 715 AERLEAENFEGAMRALAKLREPVDAFFDQVTVNCEDEKLRLNRLRLLAELRGAMLQVADF 774 Query: 699 QKIV 702 K+ Sbjct: 775 AKVA 778 >gi|154247257|ref|YP_001418215.1| glycyl-tRNA synthetase, beta subunit [Xanthobacter autotrophicus Py2] gi|154161342|gb|ABS68558.1| glycyl-tRNA synthetase, beta subunit [Xanthobacter autotrophicus Py2] Length = 733 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 306/758 (40%), Positives = 427/758 (56%), Gaps = 84/758 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+ L ++ L E G++Y+ + + TP RL L + GL Sbjct: 1 MPDLLIELFSEEIPARMQAQAADGLKKLVTDALVERGLLYEGAKAFVTPRRLALAVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE+ GPRVGA AI GFL+S GL ++ ++ DPKKGD Y+AV+ KP R Sbjct: 61 GRQADQREEKKGPRVGAPDGAIAGFLKSAGLSSLDQATVQSDPKKGDFYVAVVEKPGRPT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ I+P I+ PWPKSMRW + + W+RPL SI+ AE + +++ ++ Sbjct: 121 PEVIAEIIPAIIRSFPWPKSMRWGS-----GSLRWVRPLHSIVATFGAEGDEPEVVRFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRF AP PI V+ LD ++ LE A V++D + R++ IL DA A A Sbjct: 176 DGIVSSNITYGHRFLAPAPITVKRLDDWMAKLEAAKVVVDRDRRKDIILADAKNEAFANR 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED+ LL+E+ GLVEW V MG+F++++L +P+E+IR TI+ NQKCFV + G L Sbjct: 236 LELVEDEGLLDEVAGLVEWPVVLMGAFEERFLDIPDEVIRATIRANQKCFVLKDPATGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L+SN+ ASDGGAAIV GN RV+ ARL DA FW D+ N Sbjct: 296 ANRFLLISNLVASDGGAAIVAGNERVIRARLSDAKFFWDTDRVN---------------- 339 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L+ RM R + FH K+G+Q ER+ RIR L +IA + A AL + A + K Sbjct: 340 ----GLESRMPRFQ--SITFHEKLGSQAERIERIRRLAVEIAPKVGAPAALAEDAALFCK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G YA + A EEH KP+GP + VPT +S+ V+L Sbjct: 394 ADLLTEVVGEFPELQGLMGHYYAQGEGLAPEVAAACEEHYKPQGPGDRVPTAPVSVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----------- 528 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + + L+ Sbjct: 454 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIVLENGLRLRLADVFTGHFKLADQD 513 Query: 529 ------------IEDQ-------------------------------NLILFFHDRLKLY 545 +ED +L+ FF DRLK++ Sbjct: 514 IIRTANEARIKRVEDALGDQGGAVVGNDVAMWVSRKFGDRTADSRSIDLLSFFADRLKVH 573 Query: 546 LHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 L + RHDL++A+ E D+L +V+ + L F + G L +R IL IEE Sbjct: 574 LREHGARHDLVDAVFALEGQDDLFLLVERMTALARFLDTEDGRTLLAGYRRAVNILRIEE 633 Query: 605 KKNREISLEISPQYLLLE-AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 KK+ + LL E AE+RL I + ++ + + L + P++ Sbjct: 634 KKDGRAFAGPTDATLLKEPAEERLADAIEQVKGRVAAAVAAEDFETAMTALADLRGPVDA 693 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD V VN D +R+NRL LL I+ + + +I Sbjct: 694 FFDAVTVNDQDPALRENRLKLLDEIRAATRGIADFDRI 731 >gi|146339077|ref|YP_001204125.1| glycyl-tRNA synthetase subunit beta [Bradyrhizobium sp. ORS278] gi|146191883|emb|CAL75888.1| glycine tRNA synthetase, beta subunit [Bradyrhizobium sp. ORS278] Length = 772 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 314/793 (39%), Positives = 432/793 (54%), Gaps = 115/793 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG AI GFL++TGL ++ + I++DPKKGD Y+A++ KP R Sbjct: 61 ARQADLKEERKGPRVGGPDAAIQGFLKATGLASLEEATIQRDPKKGDFYVALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL ++PV ++ PWPKSMRW A SW+RPL +I E + +I + Sbjct: 121 LDVLAEMLPVIVRTFPWPKSMRWGQRSEKPGALSWVRPLHAITATFGLETEEPDVISFAV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP V+ + Y L +A V+LDP+ R++ I+ DA +LA A G Sbjct: 181 DGIEAGQTTYGHRFLAPSAFTVRRFEDYEAKLLDAKVVLDPQRRKDTIVTDAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED LL+E+ GLVEW V MGSFD +YL +P E+IR TI+ NQKCFV R + G L Sbjct: 241 YELVEDPVLLDEVAGLVEWPVVLMGSFDPEYLKVPGEVIRATIRNNQKCFVVRDPKTGGL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FIL +NI+A+DGG I+ GN RV+ ARL DA F + Sbjct: 301 APKFILTANIEATDGGKTIIAGNERVIRARLSDAKFF--------------------YET 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + + +VFH K+GTQ R++RI L +IA ++ AD A RA L+K Sbjct: 341 DLKTKLEDRLPKFEQ--IVFHEKLGTQAARIARIEKLAAEIAPMVGADAAKTARAAKLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E+ S A EEH KP+GP + VP + +S+ V+L Sbjct: 399 ADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAAACEEHYKPQGPGDRVPADPVSVAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----------- 528 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRIILEN + + L+ Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIILENDLRVHLADICGPAFFDLATA 518 Query: 529 ---------------------------IEDQN------------LILFFHDRLKLYLHDR 549 ++ Q LI FF DRLK+ L ++ Sbjct: 519 IRAREVGNEVEQAESGEKPGLTRFVVRVDAQTFGTRSVPVKVVDLISFFADRLKVQLREQ 578 Query: 550 DIRHDLIEAILRPE---------------------------------------NDNLLTI 570 RHDL++A+ D+LL + Sbjct: 579 GARHDLVDAVFATSPSPWWRSDAARSGAGRLDLIEAAGSEEALDREPSQEEEMKDDLLMV 638 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL--LEAEKRLY 628 V ++ L +F S G+ L KR ILAIEEKK++ + +P L L+ EK L Sbjct: 639 VRRVEALGKFLDSDDGKNLLAGTKRASNILAIEEKKDKR-KFDGAPDAALYKLDEEKALA 697 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 I + G ++ + + + + ++ FFD+V VN DD +R+NRL LL I Sbjct: 698 RAIGEVGAEAGAAVAKEDFAAAMRAMAKLRPAVDAFFDKVKVNDDDAAIRENRLKLLNEI 757 Query: 689 KNIILIVINVQKI 701 ++ V + KI Sbjct: 758 RSATRAVADFSKI 770 >gi|312115351|ref|YP_004012947.1| glycyl-tRNA synthetase subunit beta [Rhodomicrobium vannielii ATCC 17100] gi|311220480|gb|ADP71848.1| glycyl-tRNA synthetase, beta subunit [Rhodomicrobium vannielii ATCC 17100] Length = 721 Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust. Identities = 301/752 (40%), Positives = 419/752 (55%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE++SEEIPAR+Q + A+DL+ ++ L + G+ R P R+ + Sbjct: 1 MPNLLLELFSEEIPARLQGRGADDLAKLMTEALTKGGLTVGATRTLSGPRRIVFIADDVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HS +EER GPR A KA++GF+++ GL +I + Q+ KDPK GD YLA KP R Sbjct: 61 AHSAATVEERKGPRTSAPAKALEGFVKAAGLNSIDEAQVVKDPK-GDYYLARSEKPGRAA 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ VP I+K PWPKSMRW WIRPL SILC+ +K + ++ Sbjct: 120 ADIIAEAVPDIIRKFPWPKSMRWGNGR-----LRWIRPLHSILCLF-----DDKPVAFEV 169 Query: 181 KEIPCGNITYGHRFHA------PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I G+ITYGHRF + P +KV + Y L A V++ E R AIL AH Sbjct: 170 DGIKSGDITYGHRFLSGENITQPKVVKVDRISDYADALMHAKVVVAGEHRAKAILEGAHT 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS GL LVED LL E GLVEW V G F++ +L +PEE++ ++K +QKCF R+ Sbjct: 230 AASDAGLALVEDHGLLAENAGLVEWPVVLSGQFEESFLDVPEEILMTSMKAHQKCFSLRS 289 Query: 295 -REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G LAN FILVSN++A DGG AIV GN RV+ ARL DA FW+ D+ Sbjct: 290 AKTGKLANRFILVSNLEAEDGGKAIVAGNERVIRARLSDAKFFWENDRK----------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL+ A L V FH K+GTQ RV RI+ L +++A ++ AD R Sbjct: 339 ---------RPLEGLTALLGQ--VTFHEKLGTQFRRVERIKALARELAPIVGADPDDAVR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL +E V EFPELQG IG A+ Q E + DAI EH KP+GP + VPTN + Sbjct: 388 AAHLAKADLMSETVGEFPELQGIIGSYIALAQGEKPAVADAIAEHYKPQGPSDAVPTNPV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 ++ V+LADKLD L+ FWAI+EKP+GSKDP+ALRRA LG+IRI+LEN + + L + IE Sbjct: 448 AVAVALADKLDMLVGFWAIDEKPTGSKDPFALRRAALGVIRIVLENGLRVELMKIIEKAS 507 Query: 531 ---------------------------------------DQNLILFFHDRLKLYLHDRDI 551 + ++ FF DRLK+YL D+ Sbjct: 508 ELIDEDQYERAMRRVEKSGGTVAFAKTSVEWNGRQIGTREAEMLSFFADRLKVYLRDQGA 567 Query: 552 RHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-RE 609 RHDLI+A+ P D+LL +V ++ L F + G+ L +R IL IEEKK+ R Sbjct: 568 RHDLIDAVFALPGQDDLLMVVRRVEALGRFLETDDGKSLLALVRRALNILRIEEKKDARA 627 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 E + + L + EK L + + G ++ ++ + + L + P++ FFD+V Sbjct: 628 FDGEPAAKLLKEKEEKALASAVKAVGKDVRAALATEDFEAAMTALAKLRAPVDAFFDKVT 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN D ++R+NRL+LL I+ + L + + KI Sbjct: 688 VNADAADIRENRLTLLAQIRALTLDIADFSKI 719 >gi|259416308|ref|ZP_05740228.1| glycyl-tRNA synthetase, beta subunit [Silicibacter sp. TrichCH4B] gi|259347747|gb|EEW59524.1| glycyl-tRNA synthetase, beta subunit [Silicibacter sp. TrichCH4B] Length = 687 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 291/711 (40%), Positives = 419/711 (58%), Gaps = 36/711 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +A EDL + L E G+ Y TP RL L ++GL Sbjct: 1 MADLLIELFSEEIPARMQARAGEDLKKRMTDGLVEAGLTYAGAHALTTPRRLTLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA +KAI+GFLR GL D ++D KG VY A++ KP R Sbjct: 61 DHSPTVREERKGPKVGAPEKAIEGFLRGAGLS--RDQLEERDTPKGAVYFAIIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILC+L ED E ++ LD+ Sbjct: 119 AEIIAEVLEDTIRNFPWPKSMRWGA-----GSLRWVRPLHSILCVLTREDGSE-VVSLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T+GHRF AP I V S + Y L+ A V+LDP+ R AI DA A A G Sbjct: 173 DGITSGDATWGHRFMAPARISVTSFEDYAAKLKRAFVVLDPKEREAAIWQDATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V+DK LL E+ GLVEW V MGS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LEVVDDKGLLAEVAGLVEWPVVLMGSIDAEFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D L Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWEND------------------LR 334 Query: 361 LSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 ++K L+ L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++K Sbjct: 335 IAKSEVGMEGWLESLGNVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAAKVAK 394 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +E+V EFPELQG +G+ YA +A ++H P GP + VPT +S+ V++ Sbjct: 395 ADLSSEMVYEFPELQGLMGRYYAQAAGLPQEVANACQQHYSPLGPSDEVPTEPVSVAVAM 454 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------QFIEDQ 532 ADK+DTL FWAI+EKP+GSKDPYALRRA LG+IR++LEN + + LS + ++ Sbjct: 455 ADKIDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLENGVRVALSGVFTQGYEGADES 514 Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FFHDRLK++L D+ IRHD+I+A + E ND+L +V + L F SS GE L Sbjct: 515 DLLSFFHDRLKVFLRDQGIRHDVIDACIAMEGNDDLTLLVKRARALEAFMSSEDGENLLQ 574 Query: 592 SAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR IL+ EEK E S +++ AE L+ ++ I +++ + + Sbjct: 575 GFKRANNILSQAEEKDGVEYSYGADKKFIEDAAEAALFDALAANEGAISSAIEAEDFAAA 634 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ P++ FF+ V VN D++ VR NRL+LL I+ + V ++ +I Sbjct: 635 MGGMAALRAPVDAFFEAVQVNSDNQVVRRNRLNLLSQIRKVCGQVADLSRI 685 >gi|86748220|ref|YP_484716.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris HaA2] gi|86571248|gb|ABD05805.1| glycyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris HaA2] Length = 760 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 265/528 (50%), Positives = 354/528 (67%), Gaps = 11/528 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + I+KDPKKGD Y+A++ KP + Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEATIQKDPKKGDFYVALIEKPGKPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ + + ++ D+ Sbjct: 121 IDVLAEILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIVATFGIDTEEPDVVAFDI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V+ + Y L A V+LDP+ RR+ IL DA LA A Sbjct: 181 SGIQAGQVTRGHRFMAPDEISVRRFEDYEAKLYAAKVVLDPQRRRDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGVL 299 ELVED+ LL+E+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCF V+ G L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDEAFLSIPGEVIRATIRANQKCFVVSDPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA HFW+ D +LP ++S L Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDARHFWETDHKSLPE---YRDSGL---- 353 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 +PLDQR+ ++ +VFHA +GTQGER+ RI L ++IA L+ AD RA L+K Sbjct: 354 ---RPLDQRLKKIRDQKIVFHASLGTQGERIDRIIRLAREIAPLVGADPDKAARAAELAK 410 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 411 ADLVTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVAL 470 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++++N I + L + Sbjct: 471 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLVDNGIRMHLQR 518 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 90/172 (52%), Gaps = 4/172 (2%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLL 591 NL+ FF DRLK+ L D+ RHDL++A+ E D++L IV ++ L F ++ G+ L Sbjct: 588 NLLSFFADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLA 647 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLL--EAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL IEEKK+ + + +P L + EK L A I E++ + + Sbjct: 648 GTKRAANILRIEEKKDGR-AFDGAPDASLYAQDEEKALAAAIDRARAEATEAVAREDFAA 706 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ FF+ V VN DD+ VR+NRL LL I+ V + KI Sbjct: 707 AMTAMAGLRPAVDAFFEHVTVNADDKSVRENRLKLLNEIRAATRAVADFSKI 758 >gi|163742176|ref|ZP_02149564.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis 2.10] gi|161384506|gb|EDQ08887.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis 2.10] Length = 704 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 294/728 (40%), Positives = 419/728 (57%), Gaps = 53/728 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRMTDGLVEAGLTYAGAHALSTPRRLTLAMEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA KAI+GFLR GL D +++ KG VY A++ KP R Sbjct: 61 EHSPTVREERKGPKVGAPDKAIEGFLRGAGL--TRDQLEERETPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PW KSMRW T + W+RPL+SI+C+L ED E ++ L++ Sbjct: 119 AEIIAEVLEDTIRNFPWSKSMRWGT-----GSLRWVRPLQSIVCLLSKEDGAE-VVPLNI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GNITYGHRF AP I V D Y L+ A V+LDP R AI +A A A G Sbjct: 173 DGIASGNITYGHRFIAPDQITVTGFDDYAAKLKRAHVVLDPAEREAAIWQEATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG+ D ++L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLMGAIDDEFLALPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D L ++ E + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWEND------LRTVTEQGFE---- 342 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 P ++ +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 343 ---PWVGKLG-----NVTFHNKLGTQAARIDRIAALAREIALVVGADADLAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A E H P GP ++VPT +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPQDVAKACEAHYSPLGPSDDVPTEPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------- 530 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + L + I Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENDVRMGLREIIGLHFSAMENSL 514 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLI 574 +QNL+ FFHDRLK++L D+ IRHD+I+A I ND+L +V + Sbjct: 515 PADVKKTEHWDAILVEQNLLFFFHDRLKVFLRDQGIRHDVIDACIAMNGNDDLTLLVKRV 574 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L +F +S G L KR ILA EEK E S ++ ++E L+ ++ Sbjct: 575 RALEDFMASDDGPNLLQGFKRANNILAQAEEKDGVEYSYGADKKFAEDDSEIPLFDALAQ 634 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I +++ + + + ++ P++ FF+ V VN D+ VR NRL+LL I+ + Sbjct: 635 SEGAISSAIEAEDFAAAMGSMAALRVPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVCG 694 Query: 694 IVINVQKI 701 V ++ +I Sbjct: 695 QVADLTRI 702 >gi|83952444|ref|ZP_00961175.1| glycyl-tRNA synthetase beta subunit [Roseovarius nubinhibens ISM] gi|83836117|gb|EAP75415.1| glycyl-tRNA synthetase beta subunit [Roseovarius nubinhibens ISM] Length = 692 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 288/716 (40%), Positives = 412/716 (57%), Gaps = 41/716 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAAEDL + L E G+ Y + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQAKAAEDLRQRVTDGLVEAGLTYAGAASFSTPRRLTLAIEGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A +KAI+GFLR G+ D +D KKG VY AV+ KP R Sbjct: 61 AQSPTLREERKGPRVDAPEKAIEGFLRGAGVS--RDELEVRDEKKGQVYFAVISKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++ I+ PWPKSMRW + W+RPL SILC++ + + I+ +D+ Sbjct: 119 EEIVAEVLEQTIRNFPWPKSMRWGA-----GSLRWVRPLHSILCLMTNDAGEAHIVPMDV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V S + Y L+ A V+LDPE R AI +A LA A G Sbjct: 174 DGITAGDSTEGHRFMAPGRFAVTSFEDYAAKLKRAYVVLDPEERAQAIWQEASNLAFAAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +ELVEDK LL E+ GLVEW MG+ D+ +L LP E+++ ++K +QK F + + Sbjct: 234 MELVEDKGLLREVAGLVEWPVPLMGAIDEAFLGLPPEVLQTSMKEHQKFFSVKNPKTGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW+ D L+E+ Sbjct: 294 EKFVTVANRETADHGATILAGNQKVLSARLADAKFFWEND---------LREAEAGGT-- 342 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +A LD +V FH K+G+Q R+ RI L ++IA + AD L ++A +KA Sbjct: 343 ------AWLASLD--NVTFHNKLGSQAARIDRIAALAREIAGVTGADADLAEQAARWAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A +EH P GP ++VPT +S+TV+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEKAGLPAEVAGAAQEHYSPLGPSDDVPTAPVSVTVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + + + I Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENGLSLNMDEAIAKGLGQQPGAT 514 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKG 586 +L+ F HDRLK+YL D +RHD+I+A L E ND+L +V + L E + G Sbjct: 515 DGAAADLLSFIHDRLKVYLRDEGLRHDVIDACLAMEGNDDLALVVKRARALGEMLGTEDG 574 Query: 587 EKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E L KR IL+ E+K E S ++ E E+ L+A + I ++ + Sbjct: 575 ENLLQGFKRANNILSQAEDKDGVEYSYGADVKFAETEEERALFAALDAAEPKIAAALKAQ 634 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + ++ PI+ FF+ V VN D VR NRL+LL I+ ++ V ++ ++ Sbjct: 635 DFNAAMAAMAALRAPIDAFFEAVQVNTDKDVVRRNRLNLLSRIRGLVGSVADLTRV 690 >gi|254465195|ref|ZP_05078606.1| glycyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium Y4I] gi|206686103|gb|EDZ46585.1| glycyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium Y4I] Length = 699 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 290/722 (40%), Positives = 416/722 (57%), Gaps = 46/722 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L + GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRVTDGLVEAGLTYAGAAALSTPRRLTLAVDGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL D +++ KG VY A++ KP R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGL--TRDQLEERETPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW A W+RPL SILCIL E+ ++DLD+ Sbjct: 119 AEIIAEVLEDTIRNFPWPKSMRWGA-----GALRWVRPLHSILCILSDENGT-SVVDLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V D Y L+ A V+LD R AI +A A A G Sbjct: 173 DGIKSGNTTRGHRFMAPEKITVTGFDDYAAKLKRAFVVLDARERAEAIWQEATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L++VEDK LL E+ GLVEW V MGS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LDVVEDKGLLAEVAGLVEWPVVLMGSIDAEFLELPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW +N+L S E+ + ++ Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFW---ENDLRTAKS--EAGMGVWVE 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++ +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 348 ------------NLSNVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + +A E+H P GP ++VP+ +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPQAVANACEQHYSPLGPGDDVPSEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------------- 526 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++LEN + +PL+ Sbjct: 456 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLENDVRMPLNMVFGKAAEITGKRE 515 Query: 527 -----QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIKHLNEF 580 F + +L FFHDRLK++L D+ IRHD+I+A I +D+L +V + L +F Sbjct: 516 GASGEAFADVNDLRGFFHDRLKVFLRDQGIRHDVIDACIAMDGSDDLTLLVKRARALEDF 575 Query: 581 FSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + GE L KR IL+ EEK E S ++ E EK L+ + G I Sbjct: 576 LKTEDGENLLQGFKRANNILSQAEEKDGVEYSYGADRKFAEDETEKALFDALEAGGAAIS 635 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ + + + ++ P++ FF+ V VN ++ +R NRL+LL I+ + V ++ Sbjct: 636 PAIEAEDFAAAMRGMAALRAPVDAFFEAVQVNAENEVLRRNRLNLLSQIRQVCGQVADLT 695 Query: 700 KI 701 K+ Sbjct: 696 KV 697 >gi|114797868|ref|YP_759414.1| glycyl-tRNA synthetase subunit beta [Hyphomonas neptunium ATCC 15444] gi|123028308|sp|Q0C4C9|SYGB_HYPNA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114738042|gb|ABI76167.1| glycyl-tRNA synthetase, beta subunit [Hyphomonas neptunium ATCC 15444] Length = 706 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 287/736 (38%), Positives = 411/736 (55%), Gaps = 67/736 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ KA DL L G LKE G+ ++ P RL ++GL Sbjct: 1 MADLLIELFSEEIPARMQAKAEADLLAALTGKLKEAGLAWKTAFAVSGPRRLTAVVEGLD 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GP+VGA ++AI GFLR GL IS+ + DPKKGD Y+A P R Sbjct: 61 ARSADVREEKKGPKVGAPEQAIAGFLRGAGLTDISEASVVSDPKKGDFYVAYSTVPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +DV+ VP I+ WPKSMRW T W+RPL+ I+C+L ++ ++ Sbjct: 121 KDVIAEAVPAIIRDFHWPKSMRWGTGE-----LRWVRPLQRIVCVL-----DGAVVPFEV 170 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAV 239 I GN T GHR H P V Y LE + V+L + RR AIL + + Sbjct: 171 GGITSGNETEGHRVHGRGPYTVTGWADYKSQLEGQGHVVLSRDDRRAAILGGIEKACAKA 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV-TRTREGV 298 GL+ +EDK LLEE+ GL EW V +G D +L LP E+I L+++T+QK F T + G Sbjct: 231 GLQWIEDKGLLEEVTGLAEWPVVVLGQMDPDFLDLPPEVITLSMRTHQKYFAATHAKTGK 290 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FILV+NI A+DGGA I +GN+RV++ARL DA FW++D+ Sbjct: 291 LAPNFILVANIAATDGGAKIAEGNARVLSARLSDARFFWEKDK----------------- 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + PL+ +L + F ++G+ G++V R+ L +++A + AD L +RA L+ Sbjct: 334 ---ATPLEVMGEKLKT--IAFKEELGSLGDKVERVAALARELAPAVGADPGLAERAARLA 388 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA+ E+ DAI +H KP+GP ++VPT+ +SI V+ Sbjct: 389 KADLVSEMVGEFPELQGVMGRYYALAVGEDARVADAIRDHYKPQGPSDSVPTDPVSIAVA 448 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG++RI LEN + + LS I Sbjct: 449 LADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRINLENGVRLKLSNAILKAPLAVRP 508 Query: 531 ----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 D L+ FF DRLK L D+ RHDLI+A+ D+L+ Sbjct: 509 VVKGGQSDSVRSAASKAIDALIDPTLLSFFADRLKQVLRDQGKRHDLIDAVFALGEDDLV 568 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLL--EAEK 625 IV ++ L F ++ G L +R IL EEKK L + P + AE+ Sbjct: 569 LIVKRVEALAAFLATEDGATLLAGYRRAANILKAEEKKGALPDGLSVDPALIAKGPAAEQ 628 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A +++ ++ + + + L + P++ FF+ VLVN D +VR+NRL+LL Sbjct: 629 ALWASLNETTAALEAPLKTEDFAGAMTALAGLRAPVDAFFEDVLVNDSDAKVRENRLALL 688 Query: 686 QYIKNIILIVINVQKI 701 ++ + V + +I Sbjct: 689 IAVRGALHKVADFSRI 704 >gi|304393464|ref|ZP_07375392.1| glycyl-tRNA synthetase, beta subunit [Ahrensia sp. R2A130] gi|303294471|gb|EFL88843.1| glycyl-tRNA synthetase, beta subunit [Ahrensia sp. R2A130] Length = 778 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 253/540 (46%), Positives = 350/540 (64%), Gaps = 19/540 (3%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLE+ SEEIPARMQ KAA DL ++ L + G+ Y+ R+YWTP RL L L+GL+ Sbjct: 1 MPDFLLELRSEEIPARMQRKAAGDLKKLVTDALVDAGLTYEGAREYWTPRRLTLDLRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI GFLR GL+++ + + DPKKG+ +AV+ KP R Sbjct: 61 ARSADIKEERKGPRTDAPEKAIAGFLRGAGLESVDQAETRTDPKKGEFLVAVIEKPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ +++P I+ PWPKSMRW + + W+RPL+SI+ +L E+ + +++ ++ Sbjct: 121 ADIIASVMPGIIENFPWPKSMRWGAKSAQAGSLRWVRPLQSIIALLGVENDETEVVPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +TYGHRFHAP I V+ D Y+ LE A V+LD E R++ I DA LA A G Sbjct: 181 SGIATGKVTYGHRFHAPEEITVRRFDDYVAKLEAANVVLDAERRKDIIRADAANLAFAKG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ LVEW +G F YL +P E+IRLTIK NQKCFV R + E L Sbjct: 241 LELVEDEALLEEVANLVEWPVALLGEFGADYLDIPPEVIRLTIKENQKCFVLRKQGETAL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N F+LVSNI A DGG I GN++VV ARL DA FW+ D L +++ + + Sbjct: 301 SNTFLLVSNIDAHDGGTEIASGNAKVVNARLSDAKFFWETD------LHTIETEGFQPWI 354 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 D +LD +V FHAK+G+QG+RV RI L +++A L+ AD + A ++K Sbjct: 355 D----------KLD--NVTFHAKLGSQGDRVRRIAALARELAPLVGADPDDAEHAAKIAK 402 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL ++++ EFPELQG +G++YA ++ E A E H P GP ++VPT +S+ V+L Sbjct: 403 ADLNSQMIYEFPELQGAMGRKYAEIKGEKPEVAAAAELHYSPLGPTDDVPTEPVSVAVAL 462 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+ R++LENK+ + + I + + F Sbjct: 463 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVTRLLLENKLSVSVFSLIRESYIQHLFR 522 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 93/170 (54%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 +L+ FFHDRLK+YL D RHDLI+A++ P +D+LL I ++ L F + G L Sbjct: 608 DLLAFFHDRLKVYLRDSGARHDLIDAVITPASDDLLAITRRVEALGSFLDTDDGANLLAG 667 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 KR ILA EEKK ++ + P + E+ L+ + E+++ + Y Sbjct: 668 TKRAVNILAAEEKKGTGVAESVDPAMFDTDQERALFTTLESAEHCAAEAVEKQNYEGAMK 727 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ F D V+VNV+D VR NRL+L++ I++ V + KI Sbjct: 728 ALAALRAPVDAFLDDVMVNVEDDAVRANRLALMRRIRDATGTVADFSKIA 777 >gi|192289649|ref|YP_001990254.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris TIE-1] gi|192283398|gb|ACE99778.1| glycyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris TIE-1] Length = 760 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 258/544 (47%), Positives = 344/544 (63%), Gaps = 23/544 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP + Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGKPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ +PV ++ PWPKSMRW + A W+RPL SI+ E + ++ ++ Sbjct: 121 IDVIAEFLPVIVRTFPWPKSMRWGARSARPGALQWVRPLHSIIATFGMETEEPDVVHFNV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP V+ + Y L A V+LD R++ IL DA LA A Sbjct: 181 DGIEAGQTTRGHRFMAPDAFSVRRFEDYEAKLFAAKVVLDSARRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGVL 299 ELVED+ LL+E+ GLVEW MGSFDK +L +P+E+IR TI+ NQKCF V G L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDKDFLSIPDEVIRATIRANQKCFVVADPSTGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA F + Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFF--------------------YET 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + D +VFH K+GTQ R+ RI+ L KIA L+ ADV RA L K Sbjct: 341 DLKTKLEDRLPKFDQ--IVFHEKLGTQAVRIKRIQSLAAKIAPLVGADVEKTKRAAKLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDESVAAACEEHYKPQGPADRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++LEN + + L + Q + FH Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLENGLCLNLMPVVRPQASLFVFH 518 Query: 540 DRLK 543 + +K Sbjct: 519 EWMK 522 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 4/172 (2%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FF DRLK+ L D+ RHDL++A+ E D++L IV ++ L F ++ G+ L Sbjct: 588 DLLSFFADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLA 647 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLL--EAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL IEEKK+ + + +P L + EK L A I ++ + + Sbjct: 648 GTKRAANILRIEEKKDGR-AYDGAPDASLYAQDEEKALAAAIDRAKADAVAAVAKEDFAA 706 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 707 AMTAMAGLRPAVDAFFDKVTVNADDKAVRENRLKLLNEIRAATRAVADFSKI 758 >gi|91975701|ref|YP_568360.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisB5] gi|91682157|gb|ABE38459.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisB5] Length = 822 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 257/530 (48%), Positives = 341/530 (64%), Gaps = 23/530 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTEKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYIALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ + + +++ D+ Sbjct: 121 IDVLADILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIVATFGIDTEEPEVVAFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V+ + Y L A V+LDP+ R++ IL DA LA A Sbjct: 181 SGIKAGQVTRGHRFMAPDEISVRRFEDYEAKLYAAKVVLDPQRRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED+ LL+E+ GLVEW MGSFD +L +P E+IR TI+ NQKCFV L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDADFLSIPGEVIRATIRANQKCFVVADPATAKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL SNI+ASDGGAAI GN RV+ ARL DA F ++ Sbjct: 301 ANKFILTSNIEASDGGAAITAGNERVIRARLSDAKFF--------------------YDT 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + D +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 341 DLKTKLEDRLPKFDQ--IVFHEKLGTQAERIARIERLAAEIAPLVGADVEKARRAARLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ E+ S A E+H KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAAGEDASVAAACEDHYKPQGPNDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRII+ N + + L F+ Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIIVTNNLKVRLEPFL 508 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 4/173 (2%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFL 590 +L+ F DRLK+ L D+ RHDL++A+ E D++L IV ++ L F ++ G+ L Sbjct: 649 SDLLKFLVDRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLL 708 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLL--EAEKRLYAVISDFGTHIQESMDHKRYH 648 KR IL IEEKK+ + + P L + EK L A I E++ + + Sbjct: 709 AGTKRAANILRIEEKKDGR-AFDGVPDASLYAQDEEKALAAAIDRARAEATEAVAREDFA 767 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 768 AAMTAMAGLRPAVDAFFDKVTVNADDKAVRENRLKLLGEIRAATRAVADFSKI 820 >gi|39934122|ref|NP_946398.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris CGA009] gi|39647970|emb|CAE26490.1| putative glycyl-tRNA synthetase, beta chain [Rhodopseudomonas palustris CGA009] Length = 776 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 255/532 (47%), Positives = 340/532 (63%), Gaps = 23/532 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP + Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGKPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ +PV ++ PWPKSMRW + A W+RPL SI+ E + ++ ++ Sbjct: 121 IDVIAQFLPVIVRTFPWPKSMRWGARSARPGALQWVRPLHSIIATFGMETEEPDVVHFNV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP V+ + Y L A V+LD R++ IL DA LA A Sbjct: 181 DGIEAGQTTRGHRFMAPDEFSVRRFEDYEAKLFAAKVVLDSARRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 ELVED+ LL+E+ GLVEW MGSFDK +L +P+E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDKDFLSIPDEVIRATIRANQKCFVVADPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA F ++ Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFF--------------------YDT 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ + D +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 341 DLKTKLEDRLPKFDQ--IVFHEKLGTQAERIARIERLAAEIAPLVGADVEKTKRAAKLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++LE + I L I++ Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLETGVGISLRVLIQE 510 Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 10/176 (5%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FF DRLK+ L D+ RHDL++A+ E D++L IV ++ L F ++ G+ L Sbjct: 602 DLLSFFADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLA 661 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR---YH 648 KR ILAIEEKK+ + L+ EK L+ I + + E+ DH R + Sbjct: 662 GTKRAANILAIEEKKDGRTFAGSPDEALMTNIEKHLWRTIQ---STVVEANDHVRNEDFE 718 Query: 649 QIGDLLHSICEPIEIFFDQ---VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ ++ FF + + VN DD+ VR+NRL LL I+ V + KI Sbjct: 719 SAMETLSTLRSAVDSFFAKESGIKVNADDKAVRENRLKLLNEIRAATRAVADFSKI 774 >gi|300024367|ref|YP_003756978.1| glycyl-tRNA synthetase subunit beta [Hyphomicrobium denitrificans ATCC 51888] gi|299526188|gb|ADJ24657.1| glycyl-tRNA synthetase, beta subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 693 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 295/714 (41%), Positives = 408/714 (57%), Gaps = 60/714 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +A++DL +++ LK G+ R + TP RL L ++G+ SP EE+ G Sbjct: 13 IPARMQARASDDLKRLIVDGLKARGLDVGEARSFATPRRLTLVIEGVPAKSPAISEEKKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVL-KTIVPVA 131 PRVGA +A+ GFL+S GL ++ D + KD KKGD Y+A + KP R +++ +TIV VA Sbjct: 73 PRVGAPDQAVQGFLKSAGLASLEDATVVKDEKKGDFYVAKIEKPGRAAAEIIAETIVEVA 132 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 K PWPKSMRW + S+F W+RPL+S+LC+L K++ +L I GN T G Sbjct: 133 -AKFPWPKSMRWGS-----SSFQWVRPLQSVLCLLDG-----KVVPFELNGIEAGNETRG 181 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HRF P P KV++ Y L V+LDP R AI AH LA LEL+ED LL Sbjct: 182 HRFLGPGPFKVKNFADYEAKLAAHHVMLDPAKRAAAISEQAHALAKDAKLELIEDDALLA 241 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVLANCFILVSNIQ 310 E GL EW V MG+FDK +L +P E++ ++KT+QKCF R TR LAN F+LVSN+ Sbjct: 242 ENAGLTEWPVVLMGTFDKAFLEVPAEVLTTSMKTHQKCFSLRETRSKKLANKFLLVSNLV 301 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 A DGGA IV GN +V+ ARL DA FW++ DL PL + Sbjct: 302 AKDGGAEIVSGNEKVIRARLSDAKFFWEQ--------------------DLKHPLGEMAG 341 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 +L + FH K+G+Q +RV RI L ++A DA RA L+KADL + +V EF Sbjct: 342 KLS--GITFHEKLGSQKDRVERIEALAFELAGACDAIPEDARRAAGLAKADLVSGMVGEF 399 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP----TNKISITVSLADKLDTL 486 PELQG +G+ YA A+E H KP+GP + VP + +++ V+LADKLDTL Sbjct: 400 PELQGLMGRYYAEHVGTKPEIARALELHYKPKGPTDTVPREDQGDAVAVAVALADKLDTL 459 Query: 487 INFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------------D 531 + FWAI EKP+GS DPY LRRA LG+IRI+LEN + +PL+ +IE Sbjct: 460 VGFWAIGEKPTGSGDPYQLRRAALGVIRIVLENDLRVPLNHYIEIGERLHGAKKAAGEVQ 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +L+ FF DRLK++L D+ RHDLI+A+ D+L IV ++ L+ F + G L Sbjct: 520 SDLLSFFADRLKVFLRDQGKRHDLIDAVFALGGQDDLALIVRRVEALDAFLKTDDGANLL 579 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR ILAIEEKK+++ P L L EK A+ + Q+++ Sbjct: 580 AGVKRAANILAIEEKKDKKSY--AGPYDLKLITEKEETALAAAIEATKQDTVAAINVENF 637 Query: 651 GDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ E P++ FF+++LVN DD ++R+NRL LL I+ V + KI Sbjct: 638 AGAMRALSELRAPVDAFFEKILVNADDPKIRENRLRLLSEIRAATQTVADFSKI 691 >gi|89070594|ref|ZP_01157878.1| glycyl-tRNA synthetase beta subunit [Oceanicola granulosus HTCC2516] gi|89043811|gb|EAR50012.1| glycyl-tRNA synthetase beta subunit [Oceanicola granulosus HTCC2516] Length = 694 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 276/720 (38%), Positives = 418/720 (58%), Gaps = 47/720 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KA++DL ++ L E G+ Y + + TP RL L+++GL+ Sbjct: 1 MPDLLIELLSEEIPARMQAKASDDLKKMVTDGLVEAGLTYASAAAFATPRRLVLHVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ +ER GP+VGA KA++GF R G+ + ++D KG + AV+ + R Sbjct: 61 AESPDTRDERRGPKVGAPDKAVEGFCRGAGVDRAA--LEERDTGKGAFWFAVIERKGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ ++ PWPKSMRW + + W+RPL SILCIL E E ++ L++ Sbjct: 119 ADIVAEVLETTVRGFPWPKSMRWGS-----GSLRWVRPLSSILCILSDEGGAE-VVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 G +T GHRF AP I V + Y L+ A V+L P+ R AI NDA +A + G Sbjct: 173 DGQRAGAVTRGHRFMAPGEISVGDFEDYEAKLKRAKVMLRPDERAEAIWNDATNMAFSAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG + +L LP E+++ ++K +QK F R +G + Sbjct: 233 LEVVEDKGLLREVAGLVEWPVVLMGEIGESFLGLPPEVLQTSMKEHQKFFSVRAPDGRIT 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+NI+ +D GA I+ GN +V+AARL DA FW+ D + E+ ++ L+ Sbjct: 293 R-FVTVANIETADDGATILAGNQKVLAARLSDAKFFWENDLR-------VAEAGMEPWLE 344 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V F ++G+Q +R+ RI L + +A + AD L ++A ++KA Sbjct: 345 A------------LGNVTFERRLGSQQDRIGRIATLARALAGPVGADPELAEKAARVAKA 392 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y+ A EEH P GP + VPT +S+ V+LA Sbjct: 393 DLSSEMVYEFPELQGLMGRYYSAAAGLPDEVARACEEHYSPLGPSDAVPTAPVSVAVALA 452 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-------SQFIEDQ- 532 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + + L +Q + +Q Sbjct: 453 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLTNDLRLSLKDIFRDSAQIVSEQL 512 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK++L D IRHD+I+A+ P ND+L +V + L++ Sbjct: 513 QGDITTDTDDLLAFFHDRLKVHLRDEGIRHDVIDAVTAMPGNDDLALLVARARALSDVLK 572 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + GE L +R IL+ E + E S ++ +AEK L+A + + I ES Sbjct: 573 TDDGENLLQGFRRANNILSQAEAADGVEYSYGADVKFAESDAEKALFAALDEAEPKIAES 632 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + + PI+ FF+ V VN D++ +R NRL+LL I+ I L V ++ ++ Sbjct: 633 LAREDFAAAMAAMAGLRGPIDAFFEDVQVNSDNQVLRRNRLNLLSRIRQICLSVADLTRV 692 >gi|255263205|ref|ZP_05342547.1| glycyl-tRNA synthetase, beta subunit [Thalassiobium sp. R2A62] gi|255105540|gb|EET48214.1| glycyl-tRNA synthetase, beta subunit [Thalassiobium sp. R2A62] Length = 699 Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust. Identities = 284/724 (39%), Positives = 408/724 (56%), Gaps = 50/724 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ KAA+DL ++ L E G+ Y + + TP RL L ++GL+ Sbjct: 1 MSDLLIELFSEEIPARMQAKAADDLKRLVTNGLVEAGLTYASAGAFSTPRRLVLTVEGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KA++GFLRSTGL D ++D KKG V+ A++ KP R Sbjct: 61 DRSADVREERKGPRTDAPEKALEGFLRSTGL--TKDQLEERDDKKGAVWFAIVEKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILCIL AED E ++ LD+ Sbjct: 119 SEIVAEVLDATIRNFPWPKSMRWGN-----GSLRWVRPLHSILCILSAEDGAE-VVPLDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G++T+GHRF AP IKV + D L++A V+LD R AI DA A A G Sbjct: 173 DGIVSGDVTFGHRFLAPDAIKVVNFDDCSTKLKQAYVVLDASERAEAIWADATNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE++ED+ LL E+ GLVEW V MG K YL LP E+++L++K +QK F + + Sbjct: 233 LEVIEDRGLLAEVAGLVEWPVVLMGPIAKDYLNLPSEVLQLSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI+ +D GA I+ GN RV++ARL D FW +N+L S + L+ Sbjct: 293 EQFITVANIETADNGATILAGNGRVLSARLADGKFFW---ENDLREAKSGMKGWLQA--- 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+G+ E++ RI L +A AD + A LSKA Sbjct: 347 -------------LENVTFHNKLGSVAEQIERISDLSGHLAATTGADPVMATTAAQLSKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y+ + + AIEEH P GP ++VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGVMGRYYSAEAGHDAAIGAAIEEHYSPLGPSDDVPTAPVSMAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 K+DTL FW I+EKP+GSKDP+ALRRA LG+IR+ +EN + L Q Sbjct: 454 AKVDTLAGFWVIDEKPTGSKDPFALRRAALGVIRLAVENDLRFGLRDVFARQATVVSKAQ 513 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIKHLN 578 +L+ F HDRLK+YL DR ++HD+I+A + P ND+L +V + L+ Sbjct: 514 DGSDGVDSDAISDSLMGFVHDRLKVYLKDRGVKHDVIDASVAMPGNDDLSLLVRRAEALS 573 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + GE + KR +L EEKK+ E S ++ + E+ L+A + Sbjct: 574 GFLRTDDGENLVQGFKRANNMLTAEEKKDGVEYSFGADIKFAETDEERALFAALDAGEPA 633 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 I +M + + + + P++ FF V VN D +R NRL+LL I L V + Sbjct: 634 IVAAMGAEDFETAMAAMAQLRGPVDAFFKAVKVNADSDVIRRNRLNLLSRISKTCLSVAD 693 Query: 698 VQKI 701 + ++ Sbjct: 694 LTRL 697 >gi|158422656|ref|YP_001523948.1| glycyl-tRNA synthetase beta subunit [Azorhizobium caulinodans ORS 571] gi|158329545|dbj|BAF87030.1| glycyl-tRNA synthetase beta subunit [Azorhizobium caulinodans ORS 571] Length = 744 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 254/519 (48%), Positives = 339/519 (65%), Gaps = 28/519 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+ L ++ L E G++Y+ + + TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQAQAADTLRKLVTDALVERGLLYEGAKAFVTPRRLALAVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPR+GA + AI GFL+S GL +I +I+ DPKKG+ Y+AV+ +P + Sbjct: 61 GRQADSREERKGPRMGAPEGAIQGFLKSAGLASIDQAKIESDPKKGEFYVAVIERPGKAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ IVP ++ PWPKSMRW T W+RPL SI+C E +++ ++ Sbjct: 121 TEVIAEIVPEIVRTFPWPKSMRWGT-----GTMRWVRPLHSIVCTFGTEVEDPEVVRFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G++T GHRF AP P V+ L+ ++ LE A V+ D + R+ ILNDA LA G Sbjct: 176 EGIVSGDVTRGHRFLAPEPFAVRRLEDWMAKLEAAKVVADRDRRKAIILNDAKDLALVHG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED+ LLEE+ GLVEW MGSF++++L +P+E+IR TI+ NQKCFV R R G L Sbjct: 236 LELVEDEGLLEEVCGLVEWPVTLMGSFEERFLDIPDEVIRATIRANQKCFVLRDPRTGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FILVSNI A+DGGAAIV GN RV+ ARL DA FW D+ Sbjct: 296 ANRFILVSNIAATDGGAAIVAGNERVIRARLSDAKFFWDTDRRT---------------- 339 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 P+ RM++ D + FH K+G+QG R++RI L ++IA + ADV L ++A L+K Sbjct: 340 ----PMADRMSKFDA--ITFHEKLGSQGARINRIVALAREIAPRVGADVDLTEQAARLAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G+ YA + A EEH KP+GP + VPT +SI V+L Sbjct: 394 ADLLTEVVGEFPELQGLMGRYYAQHEKLPPEVAAACEEHYKPQGPSDRVPTAPVSIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRIIL+ Sbjct: 454 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIILD 492 Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 2/171 (1%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FF DRLK++L DR RHDL++A+ P D+LL + + L F + G L Sbjct: 572 DLLAFFGDRLKVHLRDRGARHDLVDAVFALPGQDDLLLVDRRVAALAAFLETEDGRTLLA 631 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDFGTHIQESMDHKRYHQI 650 +R IL IEEKK+ S LL E AE+ L A I + +++ + + Sbjct: 632 GYRRAVNILRIEEKKDGVAYKGPSEAKLLKEPAEEHLAAAIETVKRQVADAVAREDFAAA 691 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + P++ FF+ V VN + +R NRL LL I++ + + +I Sbjct: 692 MGALAHLRGPVDAFFEGVTVNAPEAALRINRLKLLDEIRSATRGIADFDRI 742 >gi|99082150|ref|YP_614304.1| glycyl-tRNA synthetase subunit beta [Ruegeria sp. TM1040] gi|123252189|sp|Q1GE74|SYGB_SILST RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|99038430|gb|ABF65042.1| Glycine--tRNA ligase [Ruegeria sp. TM1040] Length = 687 Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust. Identities = 285/711 (40%), Positives = 411/711 (57%), Gaps = 36/711 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +A EDL + L E G+ Y TP RL L ++GL Sbjct: 1 MADLLIELFSEEIPARMQARAGEDLKKRMTDGLVEAGLTYAGAHALTTPRRLTLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA +KAI+GFLR GL D ++D KG VY A + KP R Sbjct: 61 DHSPTVREERKGPKVGAPEKAIEGFLRGAGL--TRDQLEERDTPKGAVYFATIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW A W+RPL SILC+L E+ E ++ L++ Sbjct: 119 AEIIAEVLEDTIRNFPWPKSMRWGA-----GALRWVRPLHSILCLLTREEGSE-VVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ T GHRF AP V + Y L+ A V+LDP+ R AI DA A A G Sbjct: 173 DGVTSGDSTAGHRFMAPARFAVTGFEDYAAKLKRAFVVLDPKEREAAIWQDATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V+DK LL E+ GLVEW V MGS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LEVVDDKGLLAEVAGLVEWPVVLMGSIDAEFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D L Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWEND------------------LR 334 Query: 361 LSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 ++K L+ L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++K Sbjct: 335 IAKSEVGVEGWLESLGNVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAAKVAK 394 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+L Sbjct: 395 ADLSSEMVYEFPELQGLMGRYYAQAAGLPQEVANACELHYSPLGPSDDVPTEPVSVAVAL 454 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------EDQ 532 ADK+DTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + + Sbjct: 455 ADKIDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLSNDVRVGLKEVFAKAYEGADGS 514 Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FFHDRLK++L D+ IRHD+I+A + E +D+L +V + L +F S GE L Sbjct: 515 DLLSFFHDRLKVFLRDQGIRHDVIDACIAMEGSDDLTLLVKRARALEDFMKSEDGENLLQ 574 Query: 592 SAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR IL+ EEK E S +++ AE L+ ++ I +++ + + Sbjct: 575 GFKRANNILSQAEEKDGVEYSFGADKKFVEDPAEAALFEALAANEAAISTAIEAEDFAAA 634 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ P++ FF+ V VN D+ VR NRL+LL I+ + V ++ +I Sbjct: 635 MGGMAALRAPVDAFFEAVQVNSDNPVVRRNRLNLLSQIRKVCGQVADLSRI 685 >gi|254471700|ref|ZP_05085101.1| glycyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] gi|211958902|gb|EEA94101.1| glycyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] Length = 745 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 252/526 (47%), Positives = 337/526 (64%), Gaps = 28/526 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL +L L E GV Y+ + Y TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLKSLLTNALVEAGVTYEGAKAYATPRRLALHIAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA+ GFLR GL +I + ++ DPKKGD Y+AV+ KP R Sbjct: 61 AGSKATREERKGPRVGAPEKALAGFLRGAGLTSIEEAEVHNDPKKGDFYVAVIEKPGRKT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ ++P I+ PWPKS RW + + W+RPL SI+C E + ++I ++ Sbjct: 121 EDIVADVMPDIIRNFPWPKSQRWGSGN-----LRWVRPLHSIVCTFGPETEEPEVIPFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP I+V+ L+ Y+ LE A V+LD + R++ I DA A A+G Sbjct: 176 DGITSGQTTYGHRFMAPEAIEVRRLEDYMSKLEAAKVVLDADRRKDIIDTDAKNAAMALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVL 299 LELVED LLEE+ GL EW V +GS+D+ +L LP+E+I+LTIK NQK FV R L Sbjct: 236 LELVEDAGLLEEVAGLNEWPTVLIGSYDESFLQLPDEVIQLTIKVNQKNFVLRDPATSNL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N F L +NI A DGG I+ GN +VV+ARL DA FW+ Sbjct: 296 SNKFALTANIVAKDGGTKIIAGNEKVVSARLSDAKFFWE--------------------T 335 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ +++L D+VFH K+G+ RV R+ L +IA L+ AD+ RA L+K Sbjct: 336 DLKTKLESNVSKLQ--DIVFHEKLGSVAARVDRLERLAAEIAPLVGADIEQTKRAARLAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ + AIE+H KP G ++VPT+ +SI V+L Sbjct: 394 ADLVSAMVFEFPELQGLMGRYYAEAQGEDAAVAQAIEDHYKPAGASDDVPTSPVSIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 ADKLD L FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + +PL Sbjct: 454 ADKLDILAGFWAIDEKPTGSKDPFALRRAALGVIRLVLENDLRLPL 499 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 4/173 (2%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FF DR+K+ L D+ +RHDLI+A+L R D++ IV + L S G L Sbjct: 573 DLLGFFADRMKVVLKDKGVRHDLIDAVLARGGQDDIALIVKQAEALAGLLGSEDGANLLA 632 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL EEKK+ + + E P LLE AEK L A + I+ +D + Sbjct: 633 GYKRAANILRAEEKKDGK-TFEGKPDAALLEEQAEKDLAAALDSVLVEIKPLLDSADFSG 691 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L + P++ FFD + VN + EVR+NRL +L I+ + V + KI Sbjct: 692 AMAALAKLRGPVDGFFDNIHVNAEKPEVRENRLKILSEIRAAVHQVADFSKIA 744 >gi|114771721|ref|ZP_01449125.1| glycyl-tRNA synthetase beta subunit [alpha proteobacterium HTCC2255] gi|114547793|gb|EAU50683.1| glycyl-tRNA synthetase beta subunit [alpha proteobacterium HTCC2255] Length = 732 Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust. Identities = 288/742 (38%), Positives = 422/742 (56%), Gaps = 78/742 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPA MQ+KA EDL+ ++ L E G+ Y + + TP RL L ++GL Sbjct: 8 MADLLLELFSEEIPAIMQNKACEDLNNVVTNALVEAGLTYNSSKSLSTPRRLCLMIEGLI 67 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GPRV A ++A++GFLR GL TI +++ D KKG Y A++ K R Sbjct: 68 NKSPDTREERKGPRVDAPEQALNGFLRGVGL-TIDQLEVRDD-KKGKTYFAIIEKEGRFA 125 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ A+ PWPKSMRW + + W+RPL SILCIL AED E + +++ Sbjct: 126 SEIVSEVINDAVNNFPWPKSMRWGS-----KSLKWVRPLHSILCILSAEDGVE-TVKVEI 179 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N+T GHRF +P V S++ Y +DL+++ V+LD R + IL DA LA A G Sbjct: 180 DGIKSSNLTAGHRFMSPDHFTVSSIEQYQKDLKKSYVILDAHERADHILEDAKNLAFAQG 239 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED +LL E+ GLVE+ V MG K++ LP E++ ++K +QK F R + Sbjct: 240 LELVEDINLLNEVAGLVEYPVVLMGEISKEFFELPAEVLMTSMKEHQKFFSVRNPKSNRI 299 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N SD G I+ GN +V+ ARL DA FW+ D L K +++ Sbjct: 300 EKFITVANRATSDNGETIIAGNQKVLFARLSDAKFFWEND------LRIAKAGMNEWSEK 353 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+K V FH K+G+Q ER+ RI + ++L +AD+ L ++A +L K Sbjct: 354 LNK-------------VTFHNKLGSQSERIKRISFIASATSRLTNADMELTNKAAMLCKV 400 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EF +LQG +G YA I +A +EH P+GP + VP+ +SI+V+LA Sbjct: 401 DLSSEMVGEFAKLQGLMGSYYAAEAGLPIEIGNASKEHYSPQGPTDAVPSAPVSISVALA 460 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------------- 526 DK+DTL FW I+EKP+GSKDP+ALRRA LGIIR++++N+I+ PL Sbjct: 461 DKIDTLTGFWLIDEKPTGSKDPFALRRAALGIIRLVIDNEINEPLECILAYGFYLNSIAV 520 Query: 527 QFIEDQ---------------------------------NLILFFHDRLKLYLHDRDIRH 553 Q +ED+ +LI FFHDRLK+YL D++I H Sbjct: 521 QSLEDKSQTKYIDLSNNSLEQIFELIGEGHSKKTKGILRDLISFFHDRLKVYLRDQNINH 580 Query: 554 DLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 D+I+A L P N N + K L EF S G+ L KR IL+ EEKK+ +S Sbjct: 581 DVIDACLAMPNNTNFSLLAKRAKVLQEFCDSDDGKNLLQGFKRANNILSAEEKKDG-VSY 639 Query: 613 EISPQ--YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 E +P+ Y ++ E+ L+ ++ + + I + ++ + + L ++ PI++FF+ V + Sbjct: 640 EGTPEINYAQIDEERSLFKILDENESDIIDYINKQDFKSAMGALANLRLPIDLFFENVQI 699 Query: 671 NVDDREVRDNRLSLLQYIKNII 692 N D + VR NRL LL I+ I+ Sbjct: 700 NSDSKIVRRNRLCLLNRIRLIM 721 >gi|85714237|ref|ZP_01045225.1| glycyl-tRNA synthetase beta subunit [Nitrobacter sp. Nb-311A] gi|85698684|gb|EAQ36553.1| glycyl-tRNA synthetase beta subunit [Nitrobacter sp. Nb-311A] Length = 884 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 253/567 (44%), Positives = 349/567 (61%), Gaps = 59/567 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFVTPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP++GA A+ GFL++ GL+++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKLGAPDAAVQGFLKAAGLKSLEEAKIQRDPKKGDFYVALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +PV ++ PWPK MRW + A +W+RPL SI+ E + ++ ++ Sbjct: 121 IEVLAEFLPVIVRTFPWPKQMRWGERSAKPGALTWVRPLHSIIATFGMETEEPDVVPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ + Y L+ A V+LD R++ IL DA LA A G Sbjct: 181 AGITAGQVTRGHRFMAPDEFSVRRFEDYEAKLQAAKVVLDSARRKDIILADAKELAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV--------- 291 EL+ED+ LL+E+ GLVEW V MGSFD+++L +P E+IR TI+ NQKCFV Sbjct: 241 FELIEDQVLLDEVAGLVEWPVVLMGSFDEEFLSIPGEVIRATIRNNQKCFVVRRSHPLLE 300 Query: 292 ----TRTREG------------------------VLANCFILVSNIQASDGGAAIVQGNS 323 +R+ G LAN FILV+NI+ASDGG AIV GN Sbjct: 301 GEGRSRSERGEVSITPSRSSPSAQIDLPPQGGGEKLANKFILVANIEASDGGNAIVAGNE 360 Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 RV+ ARL DA F++ DL L+ R+ + + +VFH K+ Sbjct: 361 RVIRARLSDAKFFYE--------------------TDLKTKLEDRLPKFEQ--IVFHEKL 398 Query: 384 GTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAV 443 GTQ ER++RI L +IA L+ ADV RA L KADL TE+V EFPELQG +GK YA+ Sbjct: 399 GTQAERIARIERLAAEIAPLVGADVEKAKRAARLCKADLLTEVVGEFPELQGLMGKYYAL 458 Query: 444 LQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPY 503 Q E+ S A EEH KP+GP + VP++ +SI V+LADK+DTL+ FWAI+EKP+GSKDPY Sbjct: 459 AQGEDASVAAACEEHYKPQGPTDRVPSDPVSIAVALADKIDTLVGFWAIDEKPTGSKDPY 518 Query: 504 ALRRATLGIIRIILENKIDIPLSQFIE 530 ALRRA LG+IR++LEN+I L+ I+ Sbjct: 519 ALRRAALGVIRLVLENEIRSNLTSIID 545 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 3/140 (2%) Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL--L 621 D+LL IV ++ L +F + G+ L KR ILAIEEKK++ S + +P L L Sbjct: 744 QDDLLMIVRRVEALGKFLDTDDGKNLLAGTKRASNILAIEEKKDKR-SFDGAPDASLYSL 802 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + EK L A I + ++ ++ + + + ++ FFD+V VN DD ++R+NR Sbjct: 803 DEEKALAAAIDEAKREASVAVANEDFAAAMSAMAKLRPAVDAFFDKVKVNDDDAKIRENR 862 Query: 682 LSLLQYIKNIILIVINVQKI 701 L LL I+ V + +I Sbjct: 863 LRLLNEIRAATRTVADFSRI 882 >gi|89055222|ref|YP_510673.1| glycyl-tRNA synthetase subunit beta [Jannaschia sp. CCS1] gi|88864771|gb|ABD55648.1| glycyl-tRNA synthetase beta chain [Jannaschia sp. CCS1] Length = 739 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 284/764 (37%), Positives = 407/764 (53%), Gaps = 90/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +A+ D+ ++ L E G+ Y + + TP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQARASADVKRLVTDGLVEAGLTYASAGSFVTPRRLVLTVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +SP E+R GP+VGA KA++GFLR G+ D + ++D KKG Y A + R Sbjct: 61 DNSPTTTEDRRGPKVGAPDKALEGFLRGAGVAR-EDLEERED-KKGTFYYAKVTSEGRAT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++P ++ PWPKSMRW T + W+RPL+SILC+L ED + +++ D+ Sbjct: 119 SDIIADLIPQIVRNFPWPKSMRWGT-----GSLRWVRPLQSILCLLTREDGSD-VVNFDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP V S D Y L A V+L P+ R +AI +DA +A A G Sbjct: 173 DGIASGNTTEGHRFMAPGRFSVSSFDDYSAKLRAAKVVLSPQDRSDAIWHDATNMAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG + +L LP E+++ +++ +QK F R Sbjct: 233 LEVVEDAGLLTEVAGLVEWPVVLMGEIAEGFLGLPAEVLQTSMREHQKFFSVRNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GNS+V++ARL D FW D + AL+ Sbjct: 293 ERFITVANRETADEGATILAGNSKVLSARLADGKFFWDNDLRIARDGMGAWRKALE---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V F ++G+Q ERV RI L +IA ++ AD + A ++KA Sbjct: 349 ---------------NVTFERRLGSQAERVERIATLALEIAPMVGADPTAAETAARIAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +GK YA+ + + E+H P GP +NVPT +SI V+LA Sbjct: 394 DLSSEMVYEFPELQGTMGKYYALEAGLDPAIAAVAEDHYAPLGPTDNVPTAPLSIAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----------------------- 517 DKLD L FWAI+EKP+GSKDP+ALRRA LG+IRI+L Sbjct: 454 DKLDLLTGFWAIDEKPTGSKDPFALRRAALGVIRIVLDGGLRVRLDRLFDMQLVVHKGAI 513 Query: 518 ------------------------------ENKIDIPLSQFIE--------DQNLILFFH 539 E++ +P S FIE +L+ FFH Sbjct: 514 IDPIDRDEVAELVREIANHGVFGAAWKAVKESRGGLPSSGFIEMKEQVPDKSDDLLAFFH 573 Query: 540 DRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK++L +IRHD+I+A L P ND+L +V + L F + GE + KR Sbjct: 574 DRLKVHLKAENIRHDVIDAALSMPSNDDLSLVVARARALQAFLDTPDGENLIQGYKRSAN 633 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 ILA E K+ E +Y + E+ L+ + T I ++ +R+ + + + Sbjct: 634 ILAQAEAKDGVEYRYGADVKYAETDEERALFTALDVARTAIAPALAEERFEEAMTEMAKL 693 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN D+ VR NRL+LL I V ++ +I Sbjct: 694 RAPIDAFFEAVQVNADNDIVRRNRLNLLNDIAQTCGAVADLTRI 737 >gi|119383292|ref|YP_914348.1| glycine--tRNA ligase [Paracoccus denitrificans PD1222] gi|229558567|sp|A1AZF8|SYGB_PARDP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119373059|gb|ABL68652.1| glycyl-tRNA synthetase beta chain [Paracoccus denitrificans PD1222] Length = 685 Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust. Identities = 275/710 (38%), Positives = 416/710 (58%), Gaps = 36/710 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A DL ++ L E G+ Y++ + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARARGDLKKLVTDGLVEAGLTYKSAGAFSTPRRLALAIEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPR A + A++GFLRSTGL T + + D KKG V+ AV+ KP R Sbjct: 61 AQSPTTREERKGPRTDAPEAALEGFLRSTGL-TREQLEARDD-KKGQVWFAVVTKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ AI+ PWPKSMRW + + W+RPL SI+C+L ++++ ++ L++ Sbjct: 119 AEIVAEVLERAIRDFPWPKSMRWGS-----GSLRWVRPLHSIICLL-SDESGASVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I GN T GHRF AP I V + Y L A V+LD R AI +A LA A G Sbjct: 173 EGIGAGNTTRGHRFMAPDEIAVSGFEDYAAKLRRARVMLDAAEREAAIRQEAANLAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 E+V D+ LL E+ GLVEW MG+ + ++L LP E+++ ++K +QK F R + Sbjct: 233 WEIVPDEGLLSEVAGLVEWPVPLMGAIEDRFLALPPEVLQTSMKEHQKFFSARNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+NI+ D G I++GN RV+AARL DA FW+ D L+E+ D Sbjct: 293 EGFVTVANIETPDHGETILKGNQRVLAARLSDAAFFWEND---------LREAKAGMA-D 342 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++ L V F +K+G+Q +R++RI L +IA L+ AD ++A ++K Sbjct: 343 WAEGLRS---------VTFQSKLGSQADRIARIAALALEIAPLVGADADQAEQAARIAKL 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA+ DA +H P GP + VP+ +S+ V+LA Sbjct: 394 DLRSAMVGEFPELQGIMGRYYALEAGLPEPVADAARDHYSPLGPSDAVPSAPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------EDQN 533 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + L Q + + Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLLLVNGVRANLGQTFAKARPDADAAD 513 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK++L D+ +RHD+I+A+L P ND+L+ +V+ L++ + G L Sbjct: 514 LLAFFHDRLKVHLRDQGVRHDIIDAVLSMPGNDDLVLLVNRATALSDVLKTEDGTNLLQG 573 Query: 593 AKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR ILA EE E S P++ + E+ L+A + I+E++ + + Sbjct: 574 LKRAGNILAQAEEMDGVEYSFGADPKFAETDEERTLFAALDKAEPAIREAVRLEDFQAAT 633 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + S+ PI+ FF+ V +N D++ +R NRL+LL I++ ++ + +I Sbjct: 634 QGIASLRAPIDAFFEAVQINSDNQILRRNRLNLLSRIRDAGRLIADFGRI 683 >gi|83955610|ref|ZP_00964190.1| glycyl-tRNA synthetase beta subunit [Sulfitobacter sp. NAS-14.1] gi|83839904|gb|EAP79080.1| glycyl-tRNA synthetase beta subunit [Sulfitobacter sp. NAS-14.1] Length = 706 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 285/729 (39%), Positives = 412/729 (56%), Gaps = 53/729 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L + G+ Y + + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLKKLVTNGLVDAGLTYASAAAFSTPRRLTLTIEGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A +KAI+GFLR GL D ++D KG + A++ KP R Sbjct: 61 DASPSLVEERKGPKADAPEKAIEGFLRGAGL--TRDQLEERDTPKGKILFAMINKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + + W+RPL SILCIL AED + + L + Sbjct: 119 AEIVADVLETTIRNFPWPKSMRWGS-----GSLRWVRPLHSILCILSAEDGAQ-TVPLTI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP I V S D Y L+ A V+LDP RR+ I NDA +A A G Sbjct: 173 DGITAGDTTRGHRFLAPDTITVSSFDDYSAKLKRAFVVLDPAERRDTIWNDATNMAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVE+ V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEYPVVLMGQIGDDFLGLPPEVLQTSMKEHQKFFSVRNPKSGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW +N+L S E+ ++ +D Sbjct: 293 ERFVTVANRTTADDGATILAGNEKVLSARLSDAKFFW---ENDLRIAQS--EAGMQTWVD 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 RL +V FH K+GTQ E +SR+ L ++A + AD A +KA Sbjct: 348 ----------RLS--NVTFHNKLGTQAELISRMEALAGELAPTVGADAEEARAAARFAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA ++ + A ++H P GP ++VPT +SI V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGSYYAKAAGKSEAIAAAAQDHYAPLGPSDDVPTAPVSIAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + + L I Sbjct: 456 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDVSLKLRDTILEHLSQAPAPA 515 Query: 530 ------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE----------NDNLLTIVDL 573 +NL+ F HDRLK+YL D+ +RHD+I+A + ND+L +V Sbjct: 516 AGSAEETAENLLSFLHDRLKVYLKDQGVRHDIIDACISSSDGAPAGATEGNDDLTLLVKR 575 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K L+E + GE + KR IL+ E+ E S ++ E E+ L+A + Sbjct: 576 AKALSETLKTDDGENLIQGFKRANNILSQAEDADGVEYSFGADIKFAETEEERALFAALD 635 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I+ +M+ + + + S+ PI+ FFD V VN D+ VR NRL+LL I+ I Sbjct: 636 TAEAQIKPAMEAQDFGTAMSAMASLRGPIDAFFDAVQVNADNATVRRNRLNLLSRIRTIC 695 Query: 693 LIVINVQKI 701 V ++ KI Sbjct: 696 SSVADLTKI 704 >gi|254463281|ref|ZP_05076697.1| glycyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium HTCC2083] gi|206679870|gb|EDZ44357.1| glycyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium HTCC2083] Length = 685 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 289/710 (40%), Positives = 411/710 (57%), Gaps = 36/710 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ + E G+ Y + + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQGRAADDLKKLMTDGMVEAGLTYASAAAFSTPRRLCLTVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL D ++D KG VY A K R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGL--TRDKLEERDTSKGAVYFASFEKQGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL SILC+L +++A +++ LD+ Sbjct: 119 PEIIAEVLEQTIRTFPWPKSMRWGT-----GSLRWVRPLHSILCVL-SDEASSEVVPLDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP+ I V + Y L+ A V+L+ R +AI DA A A G Sbjct: 173 DGITSGKATYGHRFMAPNQITVNGFEDYEAQLKRAFVVLNAGERADAIWEDAKNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG + +L LP E+++ ++K +QK F + + Sbjct: 233 LEVVEDAGLLREVAGLVEWPVVLMGEIAEDFLGLPPEVLQTSMKEHQKFFSVKNAKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + D GA I+ GN +V+ ARL DA FW+ D L + Sbjct: 293 ERFITVANRETVDNGATILAGNQKVLFARLSDAKFFWEND------LRVATSDMASWTAA 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 LS +V FH K+GTQ ER+ RI L +++A ++ AD +RA L+KA Sbjct: 347 LS-------------NVTFHNKLGTQAERIERIAALARELAPVVGADADEAERAAKLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA E + A EEH P GP + VPT +S+ VSLA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYAEAAGETAAVAAAAEEHYAPLGPSDAVPTAPVSVAVSLA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI---PL----SQFIEDQN 533 DK+DTL FWAI+EKP+GSKDP+ALRRA LGIIR++LEN + I PL + + Sbjct: 454 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGIIRLVLENDLTIRSKPLFTKADMRADSDD 513 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK+YL D+ +RHD+I+A + E ND+L +V L F + G L Sbjct: 514 LLSFFHDRLKVYLRDQGVRHDVIDACIAMEGNDDLALLVKRAVALEAFLKTEDGTNLLQG 573 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL+ EE K+ E S ++ E E+ L+A ++ G I+ ++ + + Sbjct: 574 FKRANNILSKEEDKDGVEYSYGGDVKFAETEEERALFAALTAEGPAIETALKAEDFAGAM 633 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + PI+ FF+ V VN D++ VR NRL+LL I+ ++ V ++ ++ Sbjct: 634 SGMAGLRAPIDAFFEAVQVNSDNQTVRRNRLNLLSDIRKLVGSVADLSRV 683 >gi|209886065|ref|YP_002289922.1| glycyl-tRNA synthetase, beta subunit [Oligotropha carboxidovorans OM5] gi|209874261|gb|ACI94057.1| glycyl-tRNA synthetase, beta subunit [Oligotropha carboxidovorans OM5] Length = 805 Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust. Identities = 250/536 (46%), Positives = 339/536 (63%), Gaps = 37/536 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L E++SEEIPARMQ KAA+DL ++ L EG++Y + + TP RL L + GL Sbjct: 1 MPDLLFELFSEEIPARMQAKAADDLRKMVTDKLVAEGLVYDGAKAFATPRRLALTVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EER GP+VGA AI GFL++TGL ++ + +I+KDPKKGD Y+A++ K R Sbjct: 61 GRQPDLKEERKGPKVGAPDAAIQGFLKATGLASLDEAKIQKDPKKGDFYIALIEKTGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ I+PV ++ PWPK MRW + A +W+RPL SI+ E ++ D+ Sbjct: 121 IDVIAEILPVVVRTFPWPKQMRWGERSAKSGALTWVRPLHSIVATFGLETEDPDVVTFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ + Y+ L+ A V+LDP+ RR+ IL DA +LA A G Sbjct: 181 GGIKAGQVTRGHRFMAPAEFSVRRFEDYVAKLDAAKVMLDPQRRRDTILADAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR------- 293 ELVED LLEE GLVEW MGSFD +L +P+E+IR TI+ NQKCFV R Sbjct: 241 YELVEDDALLEEAAGLVEWPVALMGSFDPAFLAIPDEVIRATIRNNQKCFVVRDPKSGAA 300 Query: 294 --------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 G LA FIL++NI+ASDGG+AI+ GN RV+ ARL DA F Sbjct: 301 SRTALGDAAPTGKLAPKFILIANIEASDGGSAIIAGNERVIRARLSDAKFF--------- 351 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 + DL L++R+ + D ++VFH K+G+Q ER++RI L ++A L+ Sbjct: 352 -----------YETDLKTRLEERLNKFD--NIVFHEKLGSQAERIARIERLAAELAPLVG 398 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 ADV RA L+KADL TE+V EFPE+QG +GK YA+ Q E+ S AIE+H KP+GP Sbjct: 399 ADVEKAKRAARLAKADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAQAIEDHYKPQGPS 458 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 + VP++ ++I V+LADK+D L FWAI+EKP+GSKDP+ALRRA LG+IR+I +N + Sbjct: 459 DRVPSDPVAIAVALADKIDILTGFWAIDEKPTGSKDPFALRRAALGVIRLISDNSL 514 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 4/173 (2%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFL 590 +++ FF DRLK+ L ++ RHDL++A+ E D+LL +V ++ L +F + G+ L Sbjct: 632 SDVLSFFADRLKVQLREQGARHDLVDAVFALEGQDDLLMVVRRVEALGKFLDTDDGKNLL 691 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLL--LEAEKRLYAVISDFGTHIQESMDHKRYH 648 KR ILAIEEKK++ S +P L L+ EK L I + ++ + + Sbjct: 692 AGTKRAANILAIEEKKDKR-SFTGAPDAALYKLDEEKALARAIDEVKAEAAAAVAREDFA 750 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +L + ++ FFD+V VN DD+ VR+NRL LL I+ V + +I Sbjct: 751 GAMSVLAKLRPAVDAFFDKVKVNDDDKAVRENRLKLLNEIREATRAVADFSRI 803 >gi|83942787|ref|ZP_00955248.1| glycyl-tRNA synthetase, beta subunit [Sulfitobacter sp. EE-36] gi|83846880|gb|EAP84756.1| glycyl-tRNA synthetase, beta subunit [Sulfitobacter sp. EE-36] Length = 706 Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust. Identities = 283/729 (38%), Positives = 413/729 (56%), Gaps = 53/729 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L + G+ Y + + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLKKLVTNGLVDAGLTYASAAAFSTPRRLTLTVEGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A +KAI+GFLR GL D ++D KG + A++ KP R Sbjct: 61 DASPSLVEERKGPKADAPEKAIEGFLRGAGL--TRDQLEERDTPKGKILFAMINKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + + W+RPL SILCIL AED + + L + Sbjct: 119 AEIVAEVLETTIRNFPWPKSMRWGS-----GSLRWVRPLHSILCILSAEDGVQ-TVPLTI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP I V S D Y L+ V+LDP RR+ I NDA +A A G Sbjct: 173 DGITAGDTTRGHRFLAPDTITVSSFDDYSAKLKRVFVVLDPAERRDTIWNDATNMAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVE+ V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEYPVVLMGQIGDDFLGLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW +N+L S E+ ++ +D Sbjct: 293 ERFVTVANRTTADDGATILAGNEKVLSARLSDAKFFW---ENDLRIAQS--EAGMQTWVD 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 RL +V FH K+GTQ E +SR+ L ++A ++ AD A +KA Sbjct: 348 ----------RLS--NVTFHNKLGTQAELISRMEALAGELAPMVGADAEEARAAARFAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G Y ++ + A ++H P GP ++VPT ++SI V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGSYYTKAAGKSEAIAAAAQDHYAPLGPSDDVPTARVSIAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + + L I Sbjct: 456 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDVSMKLRDTILEHLSQAPAPA 515 Query: 530 ------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE----------NDNLLTIVDL 573 +NL+ F HDRLK+YL D+ +RHD+I+A + ND+L +V Sbjct: 516 AGSAEETAENLLSFLHDRLKVYLKDQGVRHDIIDACISSSDGAPAGATDGNDDLTLLVKR 575 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVIS 632 K L+E + GE + KR IL+ E +R E S ++ + E+ L+A + Sbjct: 576 AKALSETLKTDDGENLIQGFKRANNILSQAEDADRVEYSFGADIKFAETDEERALFAALD 635 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I+ +M+ + + + S+ PI+ FFD V VN D+ VR NRL+LL I+ I Sbjct: 636 TAEAQIKPAMEAQDFGTAMSAMASLRGPIDAFFDAVQVNADNATVRRNRLNLLSRIRTIC 695 Query: 693 LIVINVQKI 701 V ++ KI Sbjct: 696 SSVADLTKI 704 >gi|182679089|ref|YP_001833235.1| glycyl-tRNA synthetase, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182634972|gb|ACB95746.1| glycyl-tRNA synthetase, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 821 Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust. Identities = 255/532 (47%), Positives = 350/532 (65%), Gaps = 23/532 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ G L E+G+ ++ + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQAQAAEDLKRLVTGALSEQGLSFEGAASFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE+ GP+VGA + A+ GFL+S GL ++ ++KD KKGD Y+AV+ + R Sbjct: 61 IRQADVREEKKGPKVGAPEAALQGFLKSAGLASLDQAIVQKDAKKGDFYVAVIERAGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + A W+RPL +IL E + ++ + Sbjct: 121 LDVLADILPAVIKSFPWPKSMRWGRASARSDALRWVRPLHAILATFGPETEEPDVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T+GHRF AP PIK++ D Y+ LE+A V+LD E RR+ IL+DA L+ A G Sbjct: 181 EGIEAGQTTFGHRFLAPEPIKIRRFDDYLPALEKAKVVLDAERRRDIILHDARDLSFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+L+EDK LLEE+ GLVEW V + FD ++L +P E+IR TI+ NQKCFV R G L Sbjct: 241 LDLIEDKALLEEVAGLVEWPVVLLAEFDPQFLEIPPEVIRATIRANQKCFVLRDPVSGRL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A+ F+LV+NI+ASDGG AIV GN+RVV ARL DA FW+ Sbjct: 301 AHKFLLVANIEASDGGKAIVAGNARVVRARLSDAKFFWE--------------------T 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL L+ R+ +L+ +VFH K+GTQGERV R+ + + ++ ++ AD A RA L+K Sbjct: 341 DLQTRLEARLPKLET--IVFHEKLGTQGERVQRLVLNARDLSPIVGADQAEAARAAELAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL +E+V EFPELQG +G+ YA Q E+ + AIEEH KP+GP + VP +SI V+L Sbjct: 399 TDLVSEMVGEFPELQGLMGRYYAQKQGESSNVAAAIEEHYKPQGPNDLVPNAPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 ADKLD+L+ F+AI+E+PSGSKDPYALRRA LG+I +ILENK+ +PL + +E+ Sbjct: 459 ADKLDSLVGFFAIDERPSGSKDPYALRRAALGVIALILENKLRLPLRRQLEN 510 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 20/188 (10%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 LI FF DRLK+YL +R R+DLI+A+ P D+LL IV ++ L F + +G+ L Sbjct: 635 QLIAFFGDRLKVYLRERGARYDLIDAVFALPGQDDLLLIVARVEALASFLDTEEGKNLLA 694 Query: 592 SAKRIFQILAIEEKKN-----------------REISLEISPQYLLLEAEKRLYAVISDF 634 +R IL EEKK+ +E +L + + EAE LY + Sbjct: 695 GYRRAANILKAEEKKDGVGAFNAPADPGLLREGQERALWERIRLMREEAETHLYKAEEEI 754 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 G E + + + L S+ P++ FFD V VN + E+R NRL LL ++ + Sbjct: 755 GRKTFEG--PTPFEKAMENLASLRAPVDAFFDHVTVNASEPELRVNRLQLLNELRQAVHR 812 Query: 695 VINVQKIV 702 + + KI Sbjct: 813 IADFSKIA 820 >gi|85703625|ref|ZP_01034729.1| glycyl-tRNA synthetase beta subunit [Roseovarius sp. 217] gi|85672553|gb|EAQ27410.1| glycyl-tRNA synthetase beta subunit [Roseovarius sp. 217] Length = 725 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 287/748 (38%), Positives = 405/748 (54%), Gaps = 72/748 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAAEDL L L E G+ Y + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQTKAAEDLRARLTEALVEAGLTYAGAAAFSTPRRLALTVQGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A +KAI+GFLR GL T +I+ D KKG VY A + KP R Sbjct: 61 GQSPTTREERKGPRVDAPEKAIEGFLRGAGL-TREQLEIR-DEKKGQVYFATITKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ + I+ PWPKSMRW + W+RPL SILCIL E + K++DLD+ Sbjct: 119 AEIVAEELDRIIRNFPWPKSMRWGA-----GSLRWVRPLHSILCILTDEAGEVKVVDLDV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF V S D Y L A V+L+ E R I +A A A G Sbjct: 174 DGIRAGNSTEGHRFMGAGRFAVTSFDDYRTKLRRAHVILEAEERAQHIWQEASNQAFASG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LL E+ GLVEW V MG D+ +L LP E+++ ++K +QK F + + Sbjct: 234 LELVEDSGLLAEVAGLVEWPVVLMGRIDEAFLGLPPEVLQTSMKEHQKFFSVKNPKTGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D GA I+ GN +V+AARL DA FW+ D L +++ L Sbjct: 294 ERFVTVANVETADQGATILAGNQKVLAARLSDAKFFWEND------LRTVQAQGL----- 342 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + M + V FH K+G+Q +R++RI L ++IA + AD L ++A ++KA Sbjct: 343 ------EGMG-AGLAHVTFHNKLGSQADRIARIAALAREIAPHVGADADLAEQAAKVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA A +EH P GP + VP+ +S+ V+LA Sbjct: 396 DLQSAMVGEFPELQGLMGRYYAAAAGLPAEVAAACQEHYSPLGPGDAVPSAPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE---------------NKIDIPL 525 DK+DTL FWAI+EKP+GSKDPYALRRA LG+ R+++ N++ I + Sbjct: 456 DKIDTLTGFWAIDEKPTGSKDPYALRRAALGVDRLVVHGQLSVKLLDVLTGSFNRVGIAI 515 Query: 526 SQFIEDQ------------------------------NLILFFHDRLKLYLHDRDIRHDL 555 S+ NL+ F HDRLK++L D IRHD+ Sbjct: 516 SETASQNKQKLGGINISGGAFQVLPEVDGRRVDARAVNLLSFLHDRLKVHLKDDGIRHDV 575 Query: 556 IEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLE 613 I+A L E ND+L +V L +F + GE L KR IL E K+ E S Sbjct: 576 IDACLAMEGNDDLTLLVKRATALADFLKTDDGENLLQGFKRANNILTQAEAKDGVEYSYG 635 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 ++ + EK L+A ++ I ++ + + + ++ PI+ FF V VN + Sbjct: 636 ADVKFAETDEEKALFAALATAEPAIAIALKSEDFAGAMGAIAALRAPIDAFFTAVQVNAE 695 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 + +R NRL+LL I++I L ++ +I Sbjct: 696 SQVIRRNRLNLLSSIRHICLQAADLTRI 723 >gi|254488839|ref|ZP_05102044.1| glycyl-tRNA synthetase, beta subunit [Roseobacter sp. GAI101] gi|214045708|gb|EEB86346.1| glycyl-tRNA synthetase, beta subunit [Roseobacter sp. GAI101] Length = 742 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 290/765 (37%), Positives = 417/765 (54%), Gaps = 89/765 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L E G+ Y + + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLKKLVTNGLVEAGLTYASAAAFSTPRRLTLTVQGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A +KAI+GFLR GL D +++ KG++ A++RKP R Sbjct: 61 DASPSITEERKGPKADAPEKAIEGFLRGAGL--TRDQLEERETPKGNILFAMIRKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW T W+RPL SILCIL AED + ++ + + Sbjct: 119 ADIVAEVLETTIRNFPWPKSMRWGT-----GTLRWVRPLHSILCILSAEDGAQ-VVPMTV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP I V S D Y L+ A V+LDP RR+AI +DA +A A G Sbjct: 173 DGIDAGATTRGHRFLAPGAITVSSFDDYTAKLKRAFVVLDPAERRDAIWHDATNMAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEWPVVLMGRIGDDFLDLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW +N+L S ++ ++ +D Sbjct: 293 ERFVTVANRTTADDGATILAGNEKVLSARLSDAKFFW---ENDLRIAQS--DAGMQVWVD 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 RL +V FH K+GTQ E +SR+ L ++A ++ AD +A +KA Sbjct: 348 ----------RLS--NVTFHNKLGTQAELISRMEALAGELAPMVGADADEARQAARFAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA ++ + A ++H P GP ++VPT +SI V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGSYYAKAAGKSGAIAAAAQDHYAPLGPSDDVPTAPVSIAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFIEDQNLI 535 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + +PL +Q + ++ + Sbjct: 456 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDLHVPLDHLHAAQLVRNKRKV 515 Query: 536 L---------------------------FFH---------DRLKL-------------YL 546 + F H D KL +L Sbjct: 516 MPGLEDHHVEDLLHEIAKHGVFASAFQAFIHRNDKKAPTDDIAKLETAVPAKSGDLLSFL 575 Query: 547 HDR--------DIRHDLIEA-ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 HDR IRHD+I+A I P ND+L +V K LNE + GE + KR Sbjct: 576 HDRLKVYLKDKGIRHDIIDACIAMPGNDDLTLLVKRAKALNETLKTDDGENLIQGFKRAN 635 Query: 598 QILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL+ E + E S ++ + E+ L+A + I +MD + + + S Sbjct: 636 NILSQAETADGVEYSFGADIKFAETDEERALFAALDAAEAQINPAMDAQDFTAAMSAMAS 695 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FFD V VN D+ VR NRL+LL I+ I V ++ KI Sbjct: 696 LRAPIDAFFDAVQVNSDNGTVRRNRLNLLSRIRTICTSVADLTKI 740 >gi|126728902|ref|ZP_01744717.1| glycyl-tRNA synthetase subunit beta [Sagittula stellata E-37] gi|126710832|gb|EBA09883.1| glycyl-tRNA synthetase subunit beta [Sagittula stellata E-37] Length = 703 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 282/727 (38%), Positives = 404/727 (55%), Gaps = 52/727 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL ++ L E G+ Y + + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARAAGDLKKMMTDGLVEAGLTYASAAAFHTPRRLCLTVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KA++GF+R G+ D +++ KKG Y A + P R Sbjct: 61 AESPTLKEERRGPKVGAPDKALEGFMRGAGV--TRDQLEEREDKKGAFYYATVTTPGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ + ++ PWPKSMRW T + W+RPL ILC L+ ++ E ++DL++ Sbjct: 119 EAIVAEQLEKTVRGFPWPKSMRWGT-----GSLRWVRPLHRILC-LMRDEGGEHVVDLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF P +V S + Y L+ A V+L E R I NDA +A A G Sbjct: 173 DGIRAGRTTEGHRFMGGAPFEVTSFEDYAAKLKRAHVILSAEERAEHIWNDATNMAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L++VEDK LL E+ GLVEW V MG + +L LP E+++ ++K +QK F R + Sbjct: 233 LDVVEDKGLLAEVAGLVEWPVVLMGDIEDTFLGLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+NI+ +D GA I+ GN +V+AARL DA FW+ D L K++ L D Sbjct: 293 EKFVTVANIETADNGATILAGNQKVLAARLSDAKFFWEND------LRVAKDAGLTAWTD 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 RL+ DV FH K+G+Q R+ RI L + +A + AD +A ++KA Sbjct: 347 ----------RLE--DVTFHNKLGSQKARIERIAALARDLAPKVGADTDRAAQAAEVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A +EH P GP ++VPT S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPADVAAACQEHYSPLGPSDDVPTAPTSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + I LS I Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLGNGLRISLSDVISEALENVGAAR 514 Query: 530 -------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIK 575 +D +L+ FFHDRLK+YL D+ + HD+I+A L + ND+L +V + Sbjct: 515 PNPQDEDDYTGLDKDLDLLAFFHDRLKVYLRDQGVSHDVIDASLAMDGNDDLTLLVKRAE 574 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L + G + KR IL EEK E S ++ + E+ L+ + Sbjct: 575 ALAAVMQTEDGRNLVQGFKRANNILTQAEEKDGVEYSFGADVKFAETDEERALFEALDAA 634 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I +M + + + + ++ PI+ FFD V VN ++ VR NRL+LL I+ L Sbjct: 635 DKKIAPAMQAEDFTAAMEAMATLRAPIDAFFDAVQVNSENSVVRRNRLNLLSRIRQTCLQ 694 Query: 695 VINVQKI 701 + ++ KI Sbjct: 695 IADLTKI 701 >gi|92118676|ref|YP_578405.1| glycyl-tRNA synthetase subunit beta [Nitrobacter hamburgensis X14] gi|91801570|gb|ABE63945.1| glycyl-tRNA synthetase beta chain [Nitrobacter hamburgensis X14] Length = 764 Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust. Identities = 251/529 (47%), Positives = 336/529 (63%), Gaps = 38/529 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL+++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 VRQPDLKDERKGPKVGAPDAAVQGFLKATGLKSLDEAKIQRDPKKGDFYVALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL +PV ++ PWPK MRW + A +W+RPL SI+ E + ++ D+ Sbjct: 121 IDVLAEFLPVIVRTFPWPKQMRWGERSAKPGALTWVRPLHSIIATFGPETEEPDVVRFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP+ V+ + Y L EA V+LDP+ R++ IL DA LA A G Sbjct: 181 SGIAAGQTTRGHRFMAPNEFSVRRFEDYEAKLHEAKVVLDPQRRKDIILADAKELAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR----E 296 LVED+ LL+E+ GLVEW V MGSFD+++L +P E+IR TI+ NQKCFV R E Sbjct: 241 FGLVEDQVLLDEVAGLVEWPVVLMGSFDEEFLSIPGEVIRATIRNNQKCFVVRQPHHPLE 300 Query: 297 GV---LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G LAN FIL +NI+ASDGG AIV GN RV+ ARL DA F++ Sbjct: 301 GGGERLANRFILTANIEASDGGKAIVAGNERVIRARLSDAKFFYE--------------- 345 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--------- 404 DL L+ R+ + + +VFH K+GTQ ER++RI L +IA L+ Sbjct: 346 -----TDLKTKLEYRLPKFEK--IVFHEKLGTQAERIARIERLAAEIAPLVVPTAQGAEK 398 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + VA RA L KADL TE+V EFPELQG +GK YA+ Q+E+ S A EEH KP+GP Sbjct: 399 EKLVAKAKRAAQLCKADLLTEVVGEFPELQGLMGKYYALAQDEDASVAAACEEHYKPQGP 458 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 + VPT+ +SI V+LADK+DTL+ FW I+EKP+GSKDPYALRRA LG I Sbjct: 459 NDRVPTDPVSIAVALADKIDTLVGFWVIDEKPTGSKDPYALRRAALGAI 507 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 4/172 (2%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FF DRLK+ L ++ RHDL++A+ E D+LL IV ++ L +F + G+ L Sbjct: 592 DLLSFFADRLKVQLREQGARHDLVDAVFALEGQDDLLMIVRRVEALGKFLDTDDGKNLLA 651 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLL--LEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR ILAIEEK+++ + + +P L L+ EK L A I ++ ++ + Sbjct: 652 GTKRASNILAIEEKRDKR-TFDGAPDASLYRLDEEKTLAAAIDQVTAEASAAVANEDFAA 710 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ FFD+V VN DD +R+NRL LL I+ V + KI Sbjct: 711 AMAAMAKLRPAVDAFFDKVKVNDDDPTIRENRLKLLNEIRAATRTVADFSKI 762 >gi|288959118|ref|YP_003449459.1| glycyl-tRNA synthetase beta chain [Azospirillum sp. B510] gi|288911426|dbj|BAI72915.1| glycyl-tRNA synthetase beta chain [Azospirillum sp. B510] Length = 729 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 285/750 (38%), Positives = 416/750 (55%), Gaps = 81/750 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E++SEEIPARMQ KAA D +++ L G+ +Q + TP R+ L + GL Sbjct: 8 ELLVEVFSEEIPARMQAKAALDFRRLIVEKLAAAGLGFQAAVEQSTPRRIALVVNGLPDR 67 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + + EE+ GPRVG+ ++A+ GFL+S GL ++ C+ ++D KG Y AV K R + Sbjct: 68 TEDIKEEKKGPRVGSPEQAVAGFLKSAGLDSLDQCE-QRDTGKGVFYFAVTEKKGRETAE 126 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE--DAKEKIIDLDL 180 VL I+P A+ ++PWPKSMRW T + W+RPL SI+ + D I Sbjct: 127 VLAEIIPAAMAELPWPKSMRWGTGTA-----RWVRPLHSIIALFGGRVLDGGYDIGGAQG 181 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G+ T GHRF AP V+S Y L A V+LD E R+ I DA LA++ G Sbjct: 182 R-IAFGDSTRGHRFLAPDAFTVESFADYREKLLAAKVVLDREERKAKIKADAEALAASQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L D LLEE+ GLVEW V MGS D+ ++ +P E++ +++T+QK F EG +A Sbjct: 241 LTLSPDDALLEEVAGLVEWPVVLMGSIDESFMDVPSEVLITSMRTHQKYFAVLDAEGRMA 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 CFI+V+N + DGG A+V GN RV+ ARL DA FW DQ++ L K S K Sbjct: 301 PCFIVVANTETLDGGKAVVAGNERVLRARLSDAKFFW--DQDHKTKLEDRKSSLEK---- 354 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + FHA +GT E+V+RI++L +IA++I ADV +RA L KA Sbjct: 355 ----------------ITFHANLGTVAEKVTRIQLLAAEIARIIGADVKAANRAAELCKA 398 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPE+QG +G+ YA Q E+ DAI +H KP GP ++ PT +S+ V+LA Sbjct: 399 DLVTEVVGEFPEVQGIMGRYYAKDQGESDDVADAIADHYKPVGPSDSCPTVPVSVAVALA 458 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------------- 526 DK+DTL+ F+AI+EKP+GSKDPYALRRA LG+IR+IL N + + L+ Sbjct: 459 DKIDTLVGFFAIDEKPTGSKDPYALRRAALGVIRLILTNDLRLRLTDITGFAFNSHYAQG 518 Query: 527 QFIEDQ--------------------------------NLILFFHDRLKLYLHDRDIRHD 554 + IE + L+ FF DRLK+ L ++ +RHD Sbjct: 519 RIIEHEPEATGSKSLQKFGKALESIPSRREVWSDWTTDGLMSFFADRLKVVLREQGVRHD 578 Query: 555 LIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 L++A+ D+L+ ++ +K L F S +G L + KR I+ IEEKK+ IS + Sbjct: 579 LVDAVFALGGEDDLVRLLARVKALQAFVGSEEGANLLAAYKRASNIVRIEEKKD-GISFD 637 Query: 614 --ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVN 671 + L + E L A ++ + +D + + L ++ P++ FFD+V VN Sbjct: 638 QPVDAARLAQDEETALSAALNGASATAKPLLDAEDFTGTMAALANLRGPVDAFFDKVTVN 697 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D+++R NRL LL I+ + V + KI Sbjct: 698 AEDKDLRANRLRLLTQIRTTLNAVADFSKI 727 >gi|83311749|ref|YP_422013.1| glycyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|123541640|sp|Q2W3X1|SYGB_MAGMM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|82946590|dbj|BAE51454.1| Glycyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 688 Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust. Identities = 280/720 (38%), Positives = 413/720 (57%), Gaps = 53/720 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI+SEEIPARMQ +AA+DL ++ L + G+ + R Y TP RL L ++GL Sbjct: 1 MAEFLLEIFSEEIPARMQARAADDLRGMVSDGLAKNGITFDAARSYVTPRRLVLVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRV + +A++GFL+STG+ T+ + ++D KG Y AV+ + R Sbjct: 61 LAGPDVSEEKRGPRVSSPAQAMEGFLKSTGM-TVEQLE-QRDTGKGVFYFAVINRKGRPT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL+ + A+ PWPKS RW ++ W+RP++SIL + I+ + Sbjct: 119 AEVLREVTEGAMATFPWPKSQRWGA-----NSIRWVRPIQSILALF-----DGSIVPVAF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 G++T GHRF AP P +V+ Y+ L A V+LDP RR+AIL A LA+A G Sbjct: 169 GPATAGDMTAGHRFLAPEPFRVKDFADYLSKLRHAKVMLDPVERRHAILAGAEGLAAAEG 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L+L D LL E+ GLVEW +GS D K++ +P E++ +++ +QK F +G LA Sbjct: 229 LQLKADDGLLAEVTGLVEWPVPLVGSIDDKFMDVPAEVLITSMRAHQKYFSLLKADGSLA 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI++SN++ DGG A+V GN RV+ ARL DA FW D+ Sbjct: 289 PRFIVISNMETDDGGKAVVAGNQRVLRARLSDAKFFWDTDRK------------------ 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L+ R+ +L + F+A +GT ++V RI L IA +I AD A+ +RA L+KA Sbjct: 331 --QRLEARLPKL--AERTFYASLGTVADKVDRISALAGNIAGMIGADRAVAERAARLAKA 386 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G+ YA+ E DAI H P+GP ++ PT +S+ V+LA Sbjct: 387 DLSTELVGEFPELQGLMGRYYALNDGETPEVADAIAAHYSPQGPGDSCPTAPVSVAVALA 446 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DK+D+L+ F+AINEKP+GSKDP+ALRRA LGIIR++LEN + +PLSQ I Sbjct: 447 DKIDSLVGFFAINEKPTGSKDPFALRRAALGIIRLVLENGLRLPLSQVIFLASGHYKANL 506 Query: 530 ------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRL + L ++ +RHDLI AI D+L+ ++ ++ L F Sbjct: 507 VNSPGEVANDLLNFFADRLAVALKEKGVRHDLITAIFSLGGEDDLVRLLKRVEALGAFLD 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G L++ +R I+ IEEKK+ I S Q L + EK L +SD G + + Sbjct: 567 SDDGANLLIAYRRAANIVRIEEKKDGTIFSGYADIQLLRQDEEKALEHALSDVGQAVSNA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + P++ FFD+V VN D+ +R NRL LL I + + + + K+ Sbjct: 627 LVTEDFAAAMAALARLRRPVDAFFDKVTVNADEAPLRVNRLKLLAMIGSAMGRLADFSKV 686 >gi|254474910|ref|ZP_05088296.1| glycyl-tRNA synthetase, beta subunit [Ruegeria sp. R11] gi|214029153|gb|EEB69988.1| glycyl-tRNA synthetase, beta subunit [Ruegeria sp. R11] Length = 743 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 289/766 (37%), Positives = 412/766 (53%), Gaps = 90/766 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L L+G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRVTDGLVEAGLTYAGAHALSTPRRLTLALEGVL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA KAI+GFLR GL D ++D KG VY A + K R Sbjct: 61 DHSPTVREERKGPKVGAPDKAIEGFLRGAGL--TRDQLEERDTPKGAVYFATIEKAGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW + W+RPL SILCIL AED E ++ LD+ Sbjct: 119 ADIIAEVLEDTIRNFPWPKSMRWGA-----GSLRWVRPLHSILCILSAEDGAE-VVALDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V S + Y L+ A V+LDP R AI DA A A G Sbjct: 173 DGITSGNTTRGHRFMAPDEITVSSFEDYATKLKRAYVVLDPAEREAAIWQDATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V +GS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLLGSIDDEFLELPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW+ D L + K A Sbjct: 293 EKFVTVANRETADNGATILAGNQKVLSARLADAKFFWEND------LRTAKSEA-----G 341 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +S +D ++ +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 342 MSAWVD------NLSNVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + +A E+H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPSAVANACEQHYSPLGPSDDVPTESVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + + L I+ Sbjct: 456 DKMDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLNNDVRVRLDSVIDAHLLRHEMAQ 515 Query: 532 -----------QNLILFFHD------------------------RLKLYLHD--RDIR-- 552 Q+++ D +LK L D RD+ Sbjct: 516 NGDDPVATRLMQDMLTEIADHGVFGSAVRTVLDAFDGDLPKHIEQLKEQLPDVSRDLLSF 575 Query: 553 -HDLIEAILRPE---------------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 HD ++ LR + ND+L +V + L +F S G L KR Sbjct: 576 FHDRLKVFLRDQGIRHDVIDACIAMDGNDDLTLLVKRARALEDFLKSEDGTNLLQGFKRA 635 Query: 597 FQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL EEK E S ++ + EK L+ ++ I +++ + + + Sbjct: 636 NNILTQAEEKDGVEYSYGADKKFAEDDTEKALFDALATSEGAISSAIEAEDFAAAMGSMA 695 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ P++ FF+ V VN D+ VR NRL+LL I+ ++ V ++ +I Sbjct: 696 ALRAPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVVGQVADLTRI 741 >gi|126725590|ref|ZP_01741432.1| glycyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2150] gi|126704794|gb|EBA03885.1| glycyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2150] Length = 685 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 279/711 (39%), Positives = 397/711 (55%), Gaps = 38/711 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA DL ++ L + G+ Y + + TP RL L ++GL Sbjct: 1 MPDLLLELFSEEIPARMQTRAANDLKKLVTDGLVKSGLTYASAEAFSTPRRLTLVVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GPRV A KAI+GFLR GL D +D KKG VY A + K R Sbjct: 61 AESPMIVEERKGPRVDAPAKAIEGFLRGAGL--TRDQLDVRDEKKGQVYFARIEKAGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + ++ I+ PWPK+MRW T W+RPL SILC+L +++A +++ D+ Sbjct: 119 PIIAAEVITDTIRNFPWPKAMRWGTGE-----LRWVRPLHSILCVL-SDEAGSEVVPFDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N T GHRF V D Y L + V+L R + I DA A A G Sbjct: 173 DGIAANNTTEGHRFMGTGRFSVTDFDDYATKLRQNHVILRATDRADHIWADATNQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V+DK LL E+ GLVEW V MG+ D +L LP E+++ ++K +QK F + + Sbjct: 233 LEVVDDKGLLTEVAGLVEWPVVLMGAIDDDFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N D GA I+ GN +V++ARL DA FW +N+L S S +K Sbjct: 293 EKFITVANRDTKDNGATILAGNQKVLSARLADAKFFW---ENDLRVAKSDIGSWVK---- 345 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GTQ R+ RI L ++IA ++ AD + + A ++KA Sbjct: 346 ------------SLENVTFHNKLGTQSARIDRIATLAREIAPMVGADAEVAENAARVAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + + +EH P GP ++VP+N +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYATAAGMSDDIALSAQEHYSPLGPSDDVPSNPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----SQFIEDQN--- 533 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR+ L+N + + L ++ E+ N Sbjct: 454 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLTLDNDLSMNLKSVFARGYENANAED 513 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK YL D+ IRHD+I+A L ND+L +V L + + GE L Sbjct: 514 LLSFFHDRLKTYLRDQGIRHDVIDACLAMANNDDLSLLVKRATALADLLKTDDGENLLQG 573 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR IL E K+ +S E E AEK L+A + I+ ++ + Sbjct: 574 YKRANNILTQAETKD-GVSYEYGADIKFAEDDAEKALFAALDTADAAIKPALVADDFAAA 632 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF+ V VN D+ VR NRL+LL I+ I ++ ++ Sbjct: 633 MSAMAALRAPIDGFFEAVQVNSDNEIVRRNRLNLLHRIRAICTSTADLSRV 683 >gi|310816494|ref|YP_003964458.1| glycyl-tRNA synthetase, beta subunit [Ketogulonicigenium vulgare Y25] gi|308755229|gb|ADO43158.1| glycyl-tRNA synthetase, beta subunit [Ketogulonicigenium vulgare Y25] Length = 690 Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust. Identities = 275/723 (38%), Positives = 403/723 (55%), Gaps = 55/723 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +AA+DL ++ L E G+ Y+ + TP RL L L GL+ Sbjct: 1 MADLLIELFSEEIPARMQTRAADDLRRLVTDGLVEAGLTYEGAGAFSTPRRLVLTLSGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPR A + A+ GFLR+TGL T+ ++ GD Y AV KP R Sbjct: 61 AQSRAVREERKGPRTNAPEAALQGFLRATGL-TVDQLDVR-----GDTYFAVTEKPGRAA 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ A++ PWPKSMRW + + W+RPL SI+C+L ++++ +D+ Sbjct: 115 PEIIAEVLTSAVRNFPWPKSMRWGSGN-----LRWVRPLHSIICLL-----DDQVVPVDI 164 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V Y L+ A V+L + R + I DA A A G Sbjct: 165 DGIVAGNTTRGHRFMAPGVITVTGFADYEEKLQAARVMLRADQRADTIWTDATNAAFAKG 224 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG + +L LP E+++ +++ +QK F R Sbjct: 225 LEVVEDKGLLAEVAGLVEWPVVLMGPIGEAFLGLPPEVLQTSMREHQKFFSLRNPATGRI 284 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI +D GA I+QGN +V+AARL DA FW+ D L ++ + L Sbjct: 285 EAFITVANILTADDGATILQGNGKVLAARLSDARFFWEND------LRTVSRAGL----- 333 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + MA + +V FH ++G+Q +R++RI + + +A + AD A + KA Sbjct: 334 ------EGMA-AGLANVTFHNRLGSQTDRIARIEAMARALAPVTGADADEAALAARVVKA 386 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA + + +A + H +P GP + VP +S TV+LA Sbjct: 387 DLRSEMVGEFPELQGTMGGYYARAAGLSDAVANACKGHYQPLGPDDAVPHEAVSATVALA 446 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DKLDTL FWA++EKP+GSKDP+ALRRA LG+IR++L N + +PL + Sbjct: 447 DKLDTLTGFWAMDEKPTGSKDPFALRRAALGVIRLVLGNGLRLPLRDTLAAPLAANFAAS 506 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEF 580 +NL+ FFHDRLK++L D + HD+I+A L P ND+L +V + L F Sbjct: 507 GTAGETAPVAENLLGFFHDRLKVFLKDEGLSHDVIDACLAMPGNDDLDLLVRRARALQAF 566 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + GE + KR IL E K+ E S P + E E+ L+A ++ I Sbjct: 567 LKTDDGENLVQGFKRANNILTQAEAKDGVEYSFGADPAFAEDEVERALFAALTRAEGQIT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + + ++ PI+ FF V VN ++ VR NRL+LL I+ I L V ++ Sbjct: 627 PAIAAEDFAGAMAAMAALRAPIDAFFAGVQVNAENAIVRRNRLNLLGQIRTICLQVADLS 686 Query: 700 KIV 702 ++V Sbjct: 687 RLV 689 >gi|260426987|ref|ZP_05780966.1| glycyl-tRNA synthetase, beta subunit [Citreicella sp. SE45] gi|260421479|gb|EEX14730.1| glycyl-tRNA synthetase, beta subunit [Citreicella sp. SE45] Length = 740 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 286/764 (37%), Positives = 412/764 (53%), Gaps = 89/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL ++ L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKLVTNGLVEAGLTYSGAAAFSTPRRLTLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+V A KAI+GFLR G+ T C++++D KKG V AV+ KP R Sbjct: 61 AASPATREERRGPKVDAPGKAIEGFLRGAGV-TREQCEVRED-KKGAVLYAVIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ ++ PWPKSMRW + W+RPL ILC+L E A +++ L++ Sbjct: 119 AEIVAEVLETTVRNFPWPKSMRWGA-----GSLRWVRPLHRILCVLTTE-AGAEVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G IT GHRF P +V S + Y L+ + V+L PE R I +DA A A G Sbjct: 173 DGIWAGKITQGHRFMGGAPFEVTSFEDYETKLKRSKVILSPEERAETIWHDATNRAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG + +L LP E+++ ++K +QK F + Sbjct: 233 LEVVEDRGLLAEVSGLVEWPVVLMGKIGEDFLDLPPEVLQTSMKEHQKFFSVKNPASGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D GA I+ GN +V++ARL DA FW+ D L K+ L Sbjct: 293 EGFVTVANVETADDGATILAGNDKVLSARLSDAKFFWEND------LRVAKQDGL----- 341 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + ARL +V FH K+G+Q +R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 342 -----EAWTARL--ANVTFHNKLGSQKDRIDRIAALAREIAPMVGADAGLAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A +EH P GP ++VPT +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPAEVAAACQEHYSPLGPSDDVPTAAVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGI--------IRIILENKIDIPL--SQFIE 530 DKLDTL FWAI+EKP+GSKDPYALRRA LG+ +R+ L+ +D L Q Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLANGLRLHLDRLVDAQLLRHQITT 514 Query: 531 DQN---------------------------------------------------LILFFH 539 D N L+ FFH Sbjct: 515 DGNKDAAMLDDLLSEIAHHGVFGSAARTIIEQARSDAPSWLPVVENHAPDVSDDLVAFFH 574 Query: 540 DRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK+YL D IRHD+I+A+L P D+L +V + L E ++ G + KR Sbjct: 575 DRLKVYLRDEGIRHDVIDAVLAMPNRDDLALVVARARALMEVLNTEDGANLVQGFKRANN 634 Query: 599 ILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL EEK E S ++ E EK L+A + I+ +M + + + ++ Sbjct: 635 ILTQAEEKDGVEYSFGADVKFAETEEEKALFAALDTADASIKPAMASEEFAAAMTAMAAL 694 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN ++ VR NRL+LL I++ L V ++ ++ Sbjct: 695 RGPIDAFFEAVQVNAENAVVRRNRLNLLSRIRHTCLQVADLTRV 738 >gi|159044945|ref|YP_001533739.1| glycyl-tRNA synthetase subunit beta [Dinoroseobacter shibae DFL 12] gi|238686865|sp|A8LS45|SYGB_DINSH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157912705|gb|ABV94138.1| glycyl-tRNA synthetase beta chain [Dinoroseobacter shibae DFL 12] Length = 720 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 282/745 (37%), Positives = 406/745 (54%), Gaps = 71/745 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +AA+DL ++ L E G+ Y R Y TP RL L + + Sbjct: 1 MPELLIELFSEEIPARMQARAAQDLQKLVTNGLVEAGITYAGARAYATPRRLTLVVSDML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GP+ A +KAI+GFLRSTGL + ++ PK GDV AV+ KP R Sbjct: 61 AASAPVREERKGPKADAPEKAIEGFLRSTGLGR-EQLETRETPK-GDVLFAVIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + S+ W+RPL ILC++ E+ E I+ L + Sbjct: 119 AEIVAEVLETTIRNFPWPKSMRWGS-----SSLRWVRPLHRILCLIRDEEGAE-IVPLTV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G++T GHRF AP IKV + Y L A V+LD E R I DA A A G Sbjct: 173 DGITAGDVTEGHRFLAPGEIKVHGFEDYETKLRRAKVILDAEERAEHIWADATNQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVE+ MG D +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDRRLLSEVAGLVEFPVPLMGEIDADFLDLPPEVLQTSMKEHQKFFSVRDLKSGKI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW+ D L+ Sbjct: 293 VRFVTVANTETTDHGATILAGNRKVLSARLADAKFFWEND--------------LRIARA 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +P R + +V FH K+G+Q R++RI L +A + AD A L+KA Sbjct: 339 GMQPW-----REALENVTFHNKLGSQAARIARIADLAATLAPQVGADPDAARTAAELAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA ++H +P GP + VPT +SI V+LA Sbjct: 394 DLSSEMVFEFPELQGLMGRYYAEAAGHPAEIAAVAQDHYQPLGPSDAVPTAPLSIAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN------- 533 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IRI+LEN + +PL ++ N Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRIVLENGLRLPLINSVKHHNSENTSRP 513 Query: 534 -----------------------------------LILFFHDRLKLYLHDRDIRHDLIEA 558 L+ FFHDRLK++L D IRHD+I+A Sbjct: 514 LFSALVAHAKTDQERADGSKSMSDWKALVARSQDDLLSFFHDRLKVFLRDEGIRHDIIDA 573 Query: 559 ILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISP 616 L E ND+LL +V+ + L+E + GE L KR IL EE E S P Sbjct: 574 CLAMEGNDDLLLLVNRARALSETLKTEDGENLLQGFKRANNILTQAEEADGVEYSYGADP 633 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 ++ + E+ L+A + I +++ + + + S+ P++ FF+ V VN +++ Sbjct: 634 KFAETDEERALFAALDTAEAVIDPALEAEDFAAATAAMASLRAPLDAFFEAVQVNAENQI 693 Query: 677 VRDNRLSLLQYIKNIILIVINVQKI 701 +R NRL+LL I+ L + ++ +I Sbjct: 694 LRRNRLNLLSRIRATCLKLADLTRI 718 >gi|332560288|ref|ZP_08414610.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides WS8N] gi|332278000|gb|EGJ23315.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides WS8N] Length = 697 Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust. Identities = 279/722 (38%), Positives = 416/722 (57%), Gaps = 48/722 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + ++D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDQLETRED-KKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL+SILC+L +++A +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWGT-----GSLRWVRPLQSILCLL-SDEAGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V D Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFDDYRAKLARAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGVL 299 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F VT G + Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 F+ V+N + +D GA I++GN +V++ARL DA FW+ D L ++K + L+ Sbjct: 293 EK-FVTVANRETADHGATILKGNGKVLSARLSDARFFWEND------LRTVKTAGLE--- 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 +++ L Q V FH +G+Q R++RI L ++IA L+ A L A ++K Sbjct: 343 GMAEGLKQ---------VTFHNMLGSQAARIARIEALAREIAPLVGASPDLAAEAARVAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S+ V+L Sbjct: 394 ADLQSAMVGEFPELQGTMGSYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-------IDIP-LSQFIE- 530 ADK+DTL FW I EKP+GSKDP+ALRRA LG+IR++L N I +P +++ +E Sbjct: 454 ADKIDTLTGFWRIGEKPTGSKDPFALRRAALGVIRLLLTNNSRAGLMGIMLPAMNRHLEP 513 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEF 580 ++ L+ FFHDRLK++L ++ IRHD+I+A L P ND+L +V + L+ F Sbjct: 514 FDTSDFTPYERELLAFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSGF 573 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + G L KR IL E K+ E S P++ +AE+ L+A + I Sbjct: 574 LKTDDGTNLLQGFKRANNILTQAEAKDGVEYSFGADPKFAETDAERALFAALETAEAAIG 633 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + + ++ PI+ FF+ V VN D+ +R NRL++L I+ V ++ Sbjct: 634 PALQAEDFAAAMSAMAALRAPIDAFFETVQVNADNAVLRRNRLNMLHSIRATCARVADLT 693 Query: 700 KI 701 +I Sbjct: 694 RI 695 >gi|84499656|ref|ZP_00997944.1| glycyl-tRNA synthetase beta subunit [Oceanicola batsensis HTCC2597] gi|84392800|gb|EAQ05011.1| glycyl-tRNA synthetase beta subunit [Oceanicola batsensis HTCC2597] Length = 739 Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust. Identities = 278/763 (36%), Positives = 408/763 (53%), Gaps = 88/763 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL + L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAADLKSRMTDGLVEAGLTYGGAASFHTPRRLCLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A +KAI+GFLR G+ D Q++ D KKG VY+A++ +P R Sbjct: 61 TESPTLREERKGPRVDAPEKAIEGFLRGAGVAK-EDLQVRDD-KKGQVYVALIERPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + + W+RPL SILCIL ++++ + ++L Sbjct: 119 AEIVAEVLTSVIRNFPWPKSMRWGS-----GSLKWVRPLHSILCIL-SDESGAATVPIEL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + + T+GHRF AP V + Y L+ A V+LD + R + I DA LA A G Sbjct: 173 DGLTATDRTHGHRFMAPGAFSVTGFEDYTTKLKRACVVLDAQERADHIWQDATNLAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG D+++L LP E+++ ++K +QK F R Sbjct: 233 LEVVEDRGLLSEVAGLVEWPVVLMGDIDQEFLGLPPEVLQTSMKEHQKFFSVRNARTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V+AARL DA FW+ D + Sbjct: 293 EKFITVANRETADDGATILAGNQKVLAARLSDARFFWEND----------------LRIA 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + ++ +ARL +V FH K+G+Q R+ RI L + IA +DAD AL ++A ++KA Sbjct: 337 RTAGMEDWVARL--ANVTFHNKLGSQAARIDRIAALARDIAPTVDADPALAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A EEH P GP + VP+ +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPDQVARAAEEHYSPLGPSDAVPSAPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGI---------------------------- 512 DK+D L FW+I+EKP+GSKDP+ALRRA LG+ Sbjct: 455 DKIDLLTGFWSIDEKPTGSKDPFALRRAALGVIRLVLANGLRVDLDRFFDAQILRHRLSD 514 Query: 513 -------------------------IRIILENKIDIP--LSQFIE-----DQNLILFFHD 540 +R +L++ D P L+ E +L+ FFHD Sbjct: 515 GAAADQALLDDLLGKIAHHGMSGAPVRALLDSVEDAPGWLAAVSEHDPELGADLLAFFHD 574 Query: 541 RLKLYLHDRDIRHDLIE-AILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 RLK++L D IRHD+I+ AI PE +L +V + L+ F + GE + KR I Sbjct: 575 RLKVHLRDEGIRHDVIDVAIAMPEKSDLALVVQRAEALSAFLRTEDGENLVQGFKRANNI 634 Query: 600 LA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 L E+K P++ +E L+ + I+ +M + + L ++ Sbjct: 635 LTQAEDKDGVAYEFGADPKFAEDASETALFEALERVRPRIETAMAQEEFEAALSDLATLR 694 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN ++ VR NRL+LL I+ L V ++ ++ Sbjct: 695 APIDAFFEAVQVNAENEIVRRNRLNLLSTIRTTCLAVADLTRL 737 >gi|77462404|ref|YP_351908.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides 2.4.1] gi|123757774|sp|Q3J5C7|SYGB_RHOS4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|77386822|gb|ABA78007.1| Glycyl-tRNA synthetase, beta subunit [Rhodobacter sphaeroides 2.4.1] Length = 697 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 277/722 (38%), Positives = 417/722 (57%), Gaps = 48/722 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + ++D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDQLETRED-KKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL+SILC+L +++A +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWGT-----GSLRWVRPLQSILCLL-SDEAGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V + Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFEDYRAKLARAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGVL 299 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F VT G + Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 F+ V+N + +D G I++GN +V++ARL DA FW+ D L ++K + L+ Sbjct: 293 EK-FVTVANRETADHGETILKGNGKVLSARLSDARFFWEND------LRTVKTAGLE--- 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 +++ L Q V FH ++G+Q R++RI L ++IA L+ A L A ++K Sbjct: 343 GMAEGLKQ---------VTFHNRLGSQAARIARIEALAREIAPLVGASPDLAAEAARVAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S+ V+L Sbjct: 394 ADLQSAMVGEFPELQGTMGSYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-------IDIP-LSQFIE- 530 ADK+DTL FW I EKP+GSKDP+ALRRA LG+IR++L N I +P +++ +E Sbjct: 454 ADKIDTLAGFWRIGEKPTGSKDPFALRRAALGVIRLLLTNNSRAGLMGIMLPAMNRHLEP 513 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEF 580 +++L+ FFHDRLK++L ++ IRHD+I+A L P ND+L +V + L+ F Sbjct: 514 FDTSDFTPYERDLLAFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSAF 573 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + G L KR IL E K+ E S P++ +AE+ L+A + I Sbjct: 574 LKTDDGTNLLQGFKRANNILTQAEAKDGVEYSFGADPKFAETDAERALFAALETAEAAIG 633 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + + ++ PI+ FF+ V VN D+ +R NRL++L I+ V ++ Sbjct: 634 PALQAEDFAAAMSAMAALRAPIDAFFETVQVNADNAVLRRNRLNMLHSIRATCARVADLT 693 Query: 700 KI 701 +I Sbjct: 694 RI 695 >gi|254293492|ref|YP_003059515.1| glycyl-tRNA synthetase subunit beta [Hirschia baltica ATCC 49814] gi|254042023|gb|ACT58818.1| glycyl-tRNA synthetase, beta subunit [Hirschia baltica ATCC 49814] Length = 722 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 277/752 (36%), Positives = 411/752 (54%), Gaps = 83/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++ EEIPARMQ KA DL ++ L E G++ + ++ + P RL + +GL Sbjct: 1 MPQLLLELFCEEIPARMQAKAQADLERAVMDKLSEAGLMAEGVKAFSGPRRLCVVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP+VGA +KAI GFLR GL +I +I++D KKG Y+AV+ KP Sbjct: 61 VKSADVREERKGPKVGAPEKAIAGFLRGAGLDSIEQAEIQEDKKKGQFYVAVINKPGVET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ +VP ++ WPKSMRW + W+RPL+ ILC E ++ ++ Sbjct: 121 TQIIANMVPEIVRSFHWPKSMRWGSRE-----MRWVRPLQRILCTFDGE-----VVPFEI 170 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAV 239 I N+T GHR P KV+ D Y L+ + V+ D + R++ I +A L A Sbjct: 171 DGIASSNVTQGHRVMGAGPFKVRRFDDYSDILKNKGRVIYDRDERKDIIATEAKTLCDAQ 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGV 298 GLELV D LLEE+ GL E+ V MG D K+L LP E+I L+++ +QK F R + G Sbjct: 231 GLELVPDIGLLEEVAGLAEFPVVIMGDMDPKFLALPPEVITLSMRVHQKYFAVRDPKTGK 290 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI+V+N++A DGG I GNS+V++ARL DA+ F++ D+ Sbjct: 291 LAPKFIVVANLEAEDGGKTIAAGNSKVLSARLSDAVFFYENDK----------------- 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 +K L++R L ++VFH K+GT ++ R+ L ++A ++ A A L+ Sbjct: 334 ---AKKLEERFDSLG--NIVFHEKLGTVKDKAERVAALAGELAPIVGAKKEDAIAAAKLA 388 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL E+V EF EL+G +G+ YA+ + + D I +H KP+GP ++VPT ++ V+ Sbjct: 389 KCDLVAEMVFEFTELEGVMGRYYAMEEGQPQHIADTIRDHYKPKGPSDDVPTEPTAVAVA 448 Query: 479 LADKLDTLIN-FWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------ 525 LADKLDTL + FW INE P+GSKDPYALRR+ LG+IR++LEN I + L Sbjct: 449 LADKLDTLCSGFWTINELPTGSKDPYALRRSALGVIRLVLENNIRLKLEPCFSELAEIGF 508 Query: 526 ------------------------SQFIED-----------QNLILFFHDRLKLYLHDRD 550 + FIE QNL+ FF DRLK+YL D+ Sbjct: 509 ALSPVSKAHWTEMWKLSQDVEADGTTFIEGTGFKDEAQTLAQNLLSFFEDRLKVYLRDKG 568 Query: 551 IRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-RE 609 IRHDL++A+ D+L+ IV ++ L F + G+ + KR IL EEKK+ Sbjct: 569 IRHDLLDAVFSLGGDDLVLIVKRVEALGSFLETEDGKNLVSGHKRATNILQKEEKKDGSA 628 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I+ EI + L AE L+ ++ + + ++ + + L + P++ FFD V+ Sbjct: 629 ITGEIDKKLLSDAAELALHEALNVATANAEAALKKEDFEGAMSALSLLRGPVDTFFDDVI 688 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN +D +VR+NRL LL I+++ V + KI Sbjct: 689 VNAEDNKVRENRLKLLARIRDVTSQVADFSKI 720 >gi|126737300|ref|ZP_01753035.1| glycyl-tRNA synthetase subunit beta [Roseobacter sp. SK209-2-6] gi|126721885|gb|EBA18588.1| glycyl-tRNA synthetase subunit beta [Roseobacter sp. SK209-2-6] Length = 747 Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust. Identities = 280/770 (36%), Positives = 411/770 (53%), Gaps = 94/770 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y + TP RL L L+GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRVTDGLVEAGLTYAGAAAFSTPRRLTLALEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL D ++D KG VY A + KP R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGL--TRDQLEERDTPKGAVYFAAIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ ++ PW KSMRW T + W+RPL SILC+L +++A ++DLD+ Sbjct: 119 AAIIAEVLEDTVRNFPWSKSMRWGT-----GSLRWVRPLHSILCVL-SDEAGATVVDLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T+GHRF AP I V + Y L+ A V+LD R+ AI +A A A G Sbjct: 173 DGIKSGNTTHGHRFMAPDEIIVTGFEDYAAKLKRAHVVLDTAERQQAIWQEATNQAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V +G D ++L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLLGDIDAEFLELPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW D + + + A K + Sbjct: 293 EGFVTVANRETADQGATILAGNQKVLSARLADAKFFWANDLRVAKSETGMAAWAEKLS-- 350 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 351 ---------------NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPQEVANACEMHYSPLGPSDDVPTEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------------- 525 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++LEN + + L Sbjct: 456 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLENDVRMSLFAVLKEQANEVAEGV 515 Query: 526 ------------------SQFIED---QNLILFFHDRLKLYLHDR--------------- 549 ++FI++ ++++ + +++ +L DR Sbjct: 516 AGVENQLFIQSGQAEELEAEFIKNMGVEDILAYLNEKDELEEGDRKEFEQGISFLERISD 575 Query: 550 --DIRHDLIEAILRPE---------------NDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 HD ++ LR + ND+L +V + L +F S GE L Sbjct: 576 LLTFFHDRLKVFLRDQGIRHDVIDACIAMEGNDDLTLLVKRARALEDFLKSEDGENLLQG 635 Query: 593 AKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL+ EEK E S ++ ++EK L+A ++ I +++ + + Sbjct: 636 FKRANNILSQAEEKDGVEYSYGADVKFAEDDSEKALFAALAASEGAISTAIEAEDFAAAM 695 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ P++ FF+ V VN D+ VR NRL+LL I+ + V ++ +I Sbjct: 696 GGTAALRAPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVCGQVADLSRI 745 >gi|126461281|ref|YP_001042395.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides ATCC 17029] gi|229558571|sp|A3PH07|SYGB_RHOS1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|126102945|gb|ABN75623.1| Glycine--tRNA ligase [Rhodobacter sphaeroides ATCC 17029] Length = 697 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 278/722 (38%), Positives = 414/722 (57%), Gaps = 48/722 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + ++D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDRLETRED-KKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL+SILC+L E E ++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWGT-----GSLRWVRPLQSILCLLSDEGGAE-VVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V + Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFEDYRAKLGRAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGVL 299 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F VT G + Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 F+ V+N + +D G I++GN +V++ARL DA FW+ D L ++K + L+ Sbjct: 293 EK-FVTVANRETADHGETILKGNGKVLSARLSDARFFWEND------LRTVKTAGLE--- 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 +++ L Q V FH ++G+Q +R++RI L ++IA L+ A L A ++K Sbjct: 343 GMAEGLKQ---------VTFHNRLGSQADRIARIEALAREIAPLVGASPDLAAEAARVAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S+ V+L Sbjct: 394 ADLQSAMVGEFPELQGTMGSYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-------IDIP-LSQFIE- 530 ADK+DTL FW I EKP+GSKDP+ALRRA LG+IR++L N I +P +++ +E Sbjct: 454 ADKIDTLAGFWRIGEKPTGSKDPFALRRAALGVIRLLLTNNSRAGLMGIMLPAMNRHLEP 513 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEF 580 ++ L+ FFHDRLK++L ++ IRHD+I+A L P ND+L +V + L+ F Sbjct: 514 FDTSDFTPYERELLSFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSAF 573 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + G L KR IL E K+ E S P++ +AE+ L+A + I Sbjct: 574 LKTDDGTNLLQGFKRANNILTQAEAKDGVEYSFGADPKFAETDAERALFAALETAEAAIG 633 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + + ++ PI+ FF+ V VN D+ +R NRL++L I+ V ++ Sbjct: 634 PALQAEDFAAAMSAMAALRAPIDAFFETVQVNADNAVLRRNRLNMLHSIRATCARVADLT 693 Query: 700 KI 701 +I Sbjct: 694 RI 695 >gi|23013833|ref|ZP_00053688.1| COG0751: Glycyl-tRNA synthetase, beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 688 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 274/720 (38%), Positives = 421/720 (58%), Gaps = 53/720 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI+SEEIPARMQ +AA+DL ++ L + G+ + +R Y TP RL L ++GL Sbjct: 1 MAEFLLEIFSEEIPARMQARAADDLRGMVTDGLAKNGITFDAVRSYVTPRRLVLVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRVG+ +A++GFL+STG+ ++ + ++D KG Y AV+ + R Sbjct: 61 LAGPDVSEEKRGPRVGSPAQAMEGFLKSTGM-SVEQLE-QRDTGKGVFYFAVINRKGRPT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +V + PWPKS RW ++ W+RP++SIL + + ++ ++ Sbjct: 119 AEVLSEVVEATMAAFPWPKSQRWGA-----NSIRWVRPIQSILALF-----EGHVVPVEF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 G++T GHRF AP +V+ Y+ L A V+LDP RR+AIL+ A LA+A G Sbjct: 169 GPAKSGDMTCGHRFLAPESFRVKDFADYLARLRHAKVMLDPVERRHAILSGAEALAAAEG 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L D LL E+ GLVEW +GS D K++ +P E++ +++ +QK F +G LA Sbjct: 229 LTLKADDGLLAEVTGLVEWPVPLVGSIDDKFMDVPAEVLITSMRAHQKYFSLLKADGSLA 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 + F+++SN++ +DGG+A+V GN RV+ ARL DA FW D+ Sbjct: 289 SRFVVISNMETTDGGSAVVAGNQRVLRARLSDAKFFWDTDRK------------------ 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L+ R+ +L + F+A +GT ++V RI L IA +I AD AL +RA L+KA Sbjct: 331 --QRLESRLPKL--AERTFYASLGTVADKVERIAGLAGNIADMIGADKALAERAARLAKA 386 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA+ EN DAI H P+GP ++ PT +S+ V+LA Sbjct: 387 DLSSELVGEFPELQGLMGRYYALNDGENPLVADAIAAHYAPQGPSDSCPTAPVSVAVALA 446 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DK+D+L+ F+AINE+P+GSKDP+ALRRA LGIIR++LEN + +PLSQ I Sbjct: 447 DKIDSLVGFFAINERPTGSKDPFALRRAALGIIRLVLENGLRLPLSQVIFLASGHFKATL 506 Query: 530 ------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFS 582 ++L+ FF DRL + L ++ +RHDLI AI D+L+ ++ + L F + Sbjct: 507 VQAPGEVARDLLNFFADRLAVALKEKGVRHDLITAIFSLGGEDDLVRLLKRVDALGAFLA 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDFGTHIQES 641 S G L++ +R I+ IEEKK+ + + LL + EK L +S G ++ + Sbjct: 567 SDDGANLLIAYRRAANIVRIEEKKDATLFTGSADLALLRQDEEKALELALSKVGQEVKNA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + P++ FFD+V VN D+ ++R NRL LL I + + + + K+ Sbjct: 627 LATEDFAAAMAALARLRRPVDAFFDKVTVNADEADLRVNRLKLLAMIGSAMGGLADFSKV 686 >gi|144897875|emb|CAM74739.1| glycyl-tRNA synthetase beta chain [Magnetospirillum gryphiswaldense MSR-1] Length = 690 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 268/722 (37%), Positives = 408/722 (56%), Gaps = 55/722 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLEI+SEEIPARMQ +AAEDL ++ L + G+ + R Y TP RL L ++GL Sbjct: 1 MAELLLEIFSEEIPARMQARAAEDLLRMVTEGLGKNGLTFDGARSYVTPRRLVLVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRVGA ++A+ GFL STG+ + + K+D KG+ Y A++ K R Sbjct: 61 TAGPDVSEEKRGPRVGAPEQAMAGFLSSTGM-ALEQLE-KRDTGKGEFYFAIINKKGRPT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D K ++ A+ PWPKS RW T W+RPL+SILC+ ++ + Sbjct: 119 VDAAKEVIEAAMADFPWPKSQRWGT-----ETVRWVRPLQSILCLFAG-----AVVPVSF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN++ GHRF AP V Y L A V+LDP RR+AIL A A+A G Sbjct: 169 GPITAGNVSRGHRFLAPADFTVTDFADYSTKLAAAKVVLDPVERRHAILRQAEEAAAAAG 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L D LL E+ GLVE+ V +G D K++ +P+E++ +++++QK F +G LA Sbjct: 229 FALRADDGLLAEVTGLVEYPNVMIGVIDDKFMAVPQEVLITSMRSHQKYFSLLKADGSLA 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F++VSN++ +D GAAI GN RV+ ARL DA FW D+ Sbjct: 289 PRFLVVSNMETNDNGAAITAGNQRVLRARLSDAAFFWDTDRK------------------ 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDRAIVLSK 419 + LD R+ +L + +F+AK+GT ++V R+ +L + + ++A A +RA L+K Sbjct: 331 --QRLDSRLPKL--AERLFYAKLGTMADKVERMAILARHLTAFVEAAHADEAERAARLAK 386 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G+ YA+ E + DAI H P+GP ++VPT ++I +L Sbjct: 387 ADLSTEMVGEFPELQGIMGRYYALNDGETPAVADAIAGHYAPQGPSDSVPTAPLTICAAL 446 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADK+D+L+ F+AI+EKP+GSKDP+ALRRA LG+IR+++EN + +PL ++ Sbjct: 447 ADKIDSLVGFFAIDEKPTGSKDPFALRRAALGVIRLVVENNLRLPLFAVLQFAHSLYKPG 506 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEF 580 +L+ FF DR+K++L ++ +RHDL+ AI + D+L+ ++ + L +F Sbjct: 507 VLSADPRMVANDLLDFFADRMKVHLKEKGVRHDLVNAIFALGDEDDLVRLLARVDALADF 566 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR-LYAVISDFGTHIQ 639 SS G L++ +R I+ IEEKK+ + L E E++ L ++ + Sbjct: 567 LSSDDGSNLLIAYRRAANIVKIEEKKDGTSFAGPADVSRLKEPEEQALGQALAPARDALA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L + P++ FFD+V VN D E+R NRL LL I + V + Sbjct: 627 HALKAEDFADAMAALAQLRRPVDAFFDKVTVNADQAELRVNRLKLLAEIGAAMGEVADFS 686 Query: 700 KI 701 K+ Sbjct: 687 KV 688 >gi|217977293|ref|YP_002361440.1| glycyl-tRNA synthetase, beta subunit [Methylocella silvestris BL2] gi|217502669|gb|ACK50078.1| glycyl-tRNA synthetase, beta subunit [Methylocella silvestris BL2] Length = 737 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 301/721 (41%), Positives = 408/721 (56%), Gaps = 69/721 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+DL ++ L E+G+ + + TP RL L++ GL Sbjct: 10 MPDLLLELFSEEIPARMQAQAADDLKRLVTEALAEKGLSCEGAAAFATPRRLALHVAGLP 69 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKK-GDVYLAVLRKPKRL 119 P+ EE+ GPRVG+ + A+ GFL+S GL ++++ +I+ DPKK + YLAV+ + + Sbjct: 70 ARQPDLREEKKGPRVGSPEAAVQGFLKSAGLASLAEAKIEVDPKKKTEFYLAVVERKGQP 129 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 DVL I+P I++ PWPKSMRW A W+RPL +I+ E +I+ Sbjct: 130 TLDVLAEILPAVIKRFPWPKSMRWGAASVSPEALRWVRPLHAIIATFGPETEDPEIVPFS 189 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I ++T+GHRF AP PIKV+ D Y LE+A V+LDP RR+ IL+D LA A Sbjct: 190 VGGIEASDVTFGHRFMAPGPIKVRRFDDYAPALEKAKVVLDPTRRRDIILHDLRDLAFAQ 249 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GV 298 GLEL+ED LLEE+ GLVEW V G FD +L +P E+IR TI+ NQKCFV E G Sbjct: 250 GLELIEDAALLEEVSGLVEWPVVLTGEFDAVFLDIPPEVIRATIRANQKCFVLNDAESGK 309 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LAN F LV+NI A DGGAAI GN+RVV ARL DA FW+ Sbjct: 310 LANQFALVANIDAPDGGAAIAAGNARVVRARLSDAKFFWE-------------------- 349 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 DL L+ R+ +L+ V FH K+GTQ ERV R+ L + IA + AD L RA +L+ Sbjct: 350 TDLKVRLEDRLQKLEA--VTFHEKLGTQRERVRRLEALARLIAPQVGADPELAARAALLA 407 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA Q E +AI +H KP+GP + +P ++I V+ Sbjct: 408 KADLPSEMVGEFPELQGLMGRYYAAAQGEAPEVAEAIGDHYKPQGPGDRIPAAPVTIAVA 467 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK---------------IDI 523 LADK+D L FWAI+EKP+GSKDPYALRRA LG++ I+LEN+ +D Sbjct: 468 LADKIDILAGFWAIDEKPTGSKDPYALRRAALGVVAIVLENRLRLRLLDILALHKKIVDD 527 Query: 524 PL--------------SQFIEDQ--------NLILFFHDRLKLYLHDRDIRHDLIEAILR 561 L S + Q +L+ FF DRLK+YL +R RHDLI+A+ Sbjct: 528 DLRKLHLERARGGGGDSAAMTGQVGPDTVPADLLGFFADRLKVYLRERGARHDLIDAVFA 587 Query: 562 -PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-----NREISLEIS 615 P D+L I+ ++ L F S+ G L +R IL EEKK L S Sbjct: 588 LPGQDDLTLILRRVEALGAFLSAEDGANLLGGYRRAANILRAEEKKFGAEEAASYELPFS 647 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQES--MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 P L E L V+ G + S + + + L + P++ FF++V VN Sbjct: 648 PASLREPEELALANVLDPKGAEPRWSAAIRDEDFEAAMKALAQLRAPVDAFFEKVTVNAP 707 Query: 674 D 674 D Sbjct: 708 D 708 >gi|84516922|ref|ZP_01004280.1| glycyl-tRNA synthetase beta subunit [Loktanella vestfoldensis SKA53] gi|84509390|gb|EAQ05849.1| glycyl-tRNA synthetase beta subunit [Loktanella vestfoldensis SKA53] Length = 724 Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust. Identities = 280/746 (37%), Positives = 411/746 (55%), Gaps = 69/746 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L E G+ Y + TP RL L + GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLRKLVTDGLVEAGLTYAGAAAFATPRRLTLAIDGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQ-------------------TISDCQIKK 101 S EE+ GP + A +A+ G+L+ G++ + D + Sbjct: 61 AESTIFREEKKGPPIDANPRALKGYLQGLGMEAPDKWYDEQIEALKAGEVISFGDSFVTT 120 Query: 102 DPKKGD-VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLK 160 KG V +AVL P R D++ ++ ++ PWPKSMRW T A W+RPL+ Sbjct: 121 QELKGKRVLMAVLEYPPRKAADIIAEVLDATVRNFPWPKSMRWGT-----GALKWVRPLQ 175 Query: 161 SILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLD 220 SI+C+L +++A +++ L + I G T GHRF +P V D Y L+ A V+L Sbjct: 176 SIICLL-SDEAGAEVVPLTIDAITAGRSTRGHRFLSPDAFTVNGFDDYEAKLKRAHVILR 234 Query: 221 PECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 + R I NDA + A A GLELVED+ LL E+ GLVEW V +G D +L LP E+++ Sbjct: 235 ADERAEVIWNDATQQAFASGLELVEDRGLLAEVAGLVEWPVVLLGRIDDAFLGLPPEVLQ 294 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 ++K +QK F R + F+ V+N+ +D GA I+ GN +V+AARL DA FW+ D Sbjct: 295 TSMKEHQKFFSVRNPKTGRIERFVTVANMATADHGATILAGNQKVLAARLSDAKFFWEND 354 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 L ++K L + M + +V FH K+G+Q +R++RI L ++I Sbjct: 355 ------LRTVKADGL-----------EGMG-AGLANVTFHNKLGSQADRIARIAALAREI 396 Query: 401 AQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 A + AD L ++A +++KADL +E+V EFPELQG +G+ YA N + A ++H Sbjct: 397 APHVGADPDLAEQAAIVAKADLQSEMVGEFPELQGLMGRYYATAAGLNPAVAAACQDHYS 456 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P GP + VPT +S+ V+LADK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN Sbjct: 457 PLGPSDAVPTAPVSVAVALADKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENG 516 Query: 521 IDIPLSQF-------IEDQ----------------NLILFFHDRLKLYLHDRDIRHDLIE 557 I L I D+ +L+ FFHDRLK+YL D+ IRHD+I+ Sbjct: 517 ARINLRDIRVSAEMRIPDEFKSGETVPDDAGANYDSLLAFFHDRLKVYLKDQGIRHDIID 576 Query: 558 A-ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEIS 615 A I P ND+L +V + L + ++ GE + KR IL E K+ E S Sbjct: 577 ACIAMPNNDDLTLLVKRARALADVLATDDGENLIQGFKRANNILTQAEAKDGVEYSYGAD 636 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 ++ AEK L+A + I +M + + + ++ PI+ FF V VN D + Sbjct: 637 LKFAEDGAEKALFAALDAADAKIAPAMKDEDFSTAMTAMAALRGPIDAFFTAVQVNDDRQ 696 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKI 701 +R NRL+LL I+ I L V ++ KI Sbjct: 697 VIRRNRLNLLSRIRKICLSVADLTKI 722 >gi|295689050|ref|YP_003592743.1| glycyl-tRNA synthetase subunit beta [Caulobacter segnis ATCC 21756] gi|295430953|gb|ADG10125.1| glycyl-tRNA synthetase, beta subunit [Caulobacter segnis ATCC 21756] Length = 664 Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust. Identities = 276/694 (39%), Positives = 390/694 (56%), Gaps = 43/694 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++SEEIPARMQ +AA+DL + L G + + + + P RL L +GL Sbjct: 1 MPQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALTTFAGPRRLTLVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GPRVGA +A++GFLR TGL D +++D VY+A + K R Sbjct: 61 LAQADRKEELKGPRVGAPPQAMEGFLRKTGL--TQDQLVERD----GVYMAFIEKKGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ PWPKSM W W+RPLK ILC+L E ++ + Sbjct: 115 AEIVAEMVEAIVRGFPWPKSMIWGYKK-----LRWVRPLKRILCVLDRE-----VVPFSI 164 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I G++T GHRF P + D Y LE+ V+LD E R+ IL L A Sbjct: 165 EGIESGDVTEGHRFMGEAKPFVAKDFDEYAAGLEKHFVVLDVEERKQRILEGCKTLCFAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGV 298 LELVED+ LL+E+ GL EW +G D +L LP E+IR +++T+QK F V + E Sbjct: 225 HLELVEDQGLLDEVAGLAEWPTPVLGDMDPSFLDLPPEVIRTSMRTHQKYFAVKKPGEPG 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI ++NIQA DGGA I GN++V++ARL DA FW D+ + + K N Sbjct: 285 LAPHFITIANIQAKDGGAVIAAGNAKVLSARLSDARFFWDEDRK-----AGFEPWLEKLN 339 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 V FHAK+GT +RV RI L IA L+ ADVA A L+ Sbjct: 340 -----------------GVTFHAKLGTMAQRVERIVALAGAIAPLVGADVAKAKEAARLA 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA + AI++H KP+GP + VPT+ ++I V+ Sbjct: 383 KADLASGMVGEFPELQGLMGGYYAREAGLDPEIAAAIQDHYKPQGPSDAVPTSPLAIAVA 442 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDTL+ F+AI+EKP+GSKDPYALRRA LG+IRI+LEN + + L++F +D +LI FF Sbjct: 443 LADKLDTLVGFFAIDEKPTGSKDPYALRRAALGVIRIVLENGLRVSLAKFGKD-DLIAFF 501 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK+ L D+ RHDL++A+ +D+L IV ++ L+ F + G+ L KR Sbjct: 502 ADRLKVTLRDQGKRHDLVDAVFALGDDDLARIVARVEALDGFLKTDDGKNLLAGYKRASN 561 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 IL EEKK S E AE +LY + + +++ + + L + Sbjct: 562 ILKAEEKKGALPSGEPEAPAADSAAEVQLYDALRVLKGPLADALAKEDFTGAMAQLAGLR 621 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 P++ + D V VN D E RDNRL L +++ + Sbjct: 622 GPVDAYLDGVFVN--DPEHRDNRLKTLAAVRDAM 653 >gi|56696243|ref|YP_166600.1| glycyl-tRNA synthetase subunit beta [Ruegeria pomeroyi DSS-3] gi|56677980|gb|AAV94646.1| glycyl-tRNA synthetase, beta subunit [Ruegeria pomeroyi DSS-3] Length = 735 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 277/760 (36%), Positives = 410/760 (53%), Gaps = 86/760 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL + L E G+ Y TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAGEDLKKRITDGLVEAGLTYAYAAALSTPRRLVLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP + EER GP+VGA ++A++GFLR G+ D +++ KG +Y A + KP R Sbjct: 61 DASPTQREERKGPKVGAPEQAVEGFLRGAGIS--RDQLEERETPKGAIYFATIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW + W+RPL+SILCIL E A +++ LD+ Sbjct: 119 AAIVAEVLEDTIRNFPWPKSMRWGA-----GSLRWVRPLQSILCILTTE-AGAEVVPLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V S + Y L+ A V+LDP R I NDA +A A G Sbjct: 173 DGIKAGDSTAGHRFMAPARFSVTSFEDYQVKLKRAFVVLDPAERAEHIWNDAQNMAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V MG ++L LP E+++ +++ +QK F R + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLMGQIGSEFLDLPAEVLQTSMREHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW D L+ + Sbjct: 293 ERFVTVANRETADNGATILAGNQKVLSARLADAKFFWDND---------LRAA------- 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +D + L+ +V FH K+G+QG+R+ RI L +++A ++ A+ ++A L+KA Sbjct: 337 -HAGMDAWVQALE--NVTFHNKLGSQGDRIRRIAALARELAPVVGAEADQAEQAATLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y ++ + ++H P GP + VPT +S+ V+LA Sbjct: 394 DLSSEMVFEFPELQGLMGRYYIAASGQDAAIAAVAQDHYSPLGPSDEVPTAPLSVIVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + +PL + I+ Q L +H Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLANDLRLPLDRSIDAQLLRHKYHA 513 Query: 541 R-------------------------------------------------LKLYLHDR-- 549 L ++HDR Sbjct: 514 SNGEAALRDLIEEIADHGVFGAAFETIKEKLGDAGALEALAGDVPDLSADLLAFIHDRLK 573 Query: 550 ------DIRHDLIEA-ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA- 601 IRHD+I+A I ND+L +V + LN ++ GE + KR IL Sbjct: 574 VFLRDEGIRHDVIDACIAMAGNDDLNLLVKRARALNTVIATEDGENLVQGFKRANNILTQ 633 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 EEK E S ++ ++EK L+A + + I ++ + + + ++ P+ Sbjct: 634 AEEKDGVEYSFGADIKFAEADSEKALFAALEQAESKINVALKAEDFAAAMTAMAALRAPV 693 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FFDQV VN D++ VR NRL+LL I+ + V ++ +I Sbjct: 694 DAFFDQVQVNSDNQVVRRNRLNLLSQIRKVCSSVADLTRI 733 >gi|84683642|ref|ZP_01011545.1| glycyl-tRNA synthetase beta subunit [Maritimibacter alkaliphilus HTCC2654] gi|84668385|gb|EAQ14852.1| glycyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2654] Length = 742 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 284/767 (37%), Positives = 405/767 (52%), Gaps = 94/767 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +AAEDL ++ L E G+ Y + TP RL L L L Sbjct: 1 MADLLIELFSEEIPARMQGRAAEDLKKLVTDGLVEAGLTYGGAAAFATPRRLCLTLTDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GPR A + A++GFLRSTGL D +D KKG + AV+ K R Sbjct: 61 AMSPDTREERKGPRTDAPETALEGFLRSTGL--TKDQLEARDEKKGQAWYAVIAKKGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW + W+RPL SILCIL E E ++ LD+ Sbjct: 119 ADIVAEVLERTIRNFPWPKSMRWGA-----GSLKWVRPLHSILCILSDEGGAE-VVPLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP P KV S D Y L++A V+LDP R I +DA + A A G Sbjct: 173 DGIAAGDTTQGHRFMAPGPFKVSSFDDYQAKLKKACVVLDPAERAETIWHDAEQAAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ELVEDK LL E+ GLVEW V MG ++ LP E+++ ++K +QK F + + Sbjct: 233 FELVEDKGLLSEVAGLVEWPVVLMGDIGADFIDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP--NLSSLKESALKFN 358 F+ V+N + +D GA I+ GN +V+AARL DA FW+ D + ++S+ ES Sbjct: 293 EKFVTVANRETADDGATILAGNQKVLAARLSDAKFFWENDLRTVAQHGMTSMSES----- 347 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + +V FH ++G+Q ER+ RI L ++IA ++ A+ A ++ Sbjct: 348 ---------------LTNVTFHRELGSQSERIDRIAALARRIAPMVGAEPDEAVLAAKVA 392 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA + + DA +H P GP ++VPT +S+ V+ Sbjct: 393 KADLASEMVYEFPELQGIMGRYYAKRAGLSDAVADACRDHYSPLGPSDDVPTAPVSVAVA 452 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-- 536 LADKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + Q L L Sbjct: 453 LADKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLANDLRLNLDPVFDMQLLRLKG 512 Query: 537 ---------------------------------FFHDR-------------------LKL 544 F DR L Sbjct: 513 AREAALPNDGVAMMIDEIADHGVFAAALETVLDAFKDRDGAEALAGLKTAVPDLSDDLLA 572 Query: 545 YLHDR--------DIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 + HDR IRHD+I+A L P ND+L +V + L F ++ G KR Sbjct: 573 FFHDRLKVHLRDEGIRHDVIDACLNMPGNDDLTLLVKRARALAAFLATEDGANLTQGFKR 632 Query: 596 IFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 IL EEK E S ++ EK L+A + ++ +M+ + + ++ Sbjct: 633 ANNILTQAEEKDGVEYSFGADVKFAEAAEEKALFAALDSAAAPLKTAMEAEDFAGAMSVM 692 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FF+ V +N +++ VR NRL+LL I++I + V ++ +I Sbjct: 693 ADLRAPIDAFFEAVQINTENQIVRRNRLNLLARIRDICMSVADLTRI 739 >gi|221638266|ref|YP_002524528.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides KD131] gi|221159047|gb|ACM00027.1| Glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides KD131] Length = 728 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 278/753 (36%), Positives = 410/753 (54%), Gaps = 79/753 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + + D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDRLETRAD-KKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL+SILC+L E E ++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWGT-----GSLRWVRPLQSILCLLSDEGGAE-VVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V D Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFDDYRAKLARAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGVL 299 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F VT G + Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 F+ V+N + +D G I++GN +V++ARL DA FW+ D L ++K + L+ Sbjct: 293 EK-FVTVANRETADHGETILKGNGKVLSARLSDARFFWEND------LRTVKTAGLE--- 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 +++ L Q V FH ++G+Q +R++RI L ++IA L+ A L A ++K Sbjct: 343 GMAEGLKQ---------VTFHNRLGSQADRIARIEALAREIAPLVGASPDLAAEAARVAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S V+L Sbjct: 394 ADLQSAMVGEFPELQGTMGTYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSGAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP--------------- 524 ADK+DTL FWAI+EKP+GSKDP+ALRRA LG++R+ LEN++ Sbjct: 454 ADKIDTLTGFWAIDEKPTGSKDPFALRRAALGVVRLNLENELRYSLKLLLLDGLVANEIA 513 Query: 525 --LSQFIEDQN--------------------------------LILFFHDRLKLYLHDRD 550 + F + N L+ FFHDRLK++L ++ Sbjct: 514 RQFTHFKSETNALAGIDDVEAFKQHVTFSLDAAKDKANDLFEYLLAFFHDRLKVHLREQG 573 Query: 551 IRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR- 608 IRHD+I+A L P ND+L +V + L+ F + G L KR IL E K+ Sbjct: 574 IRHDVIDACLAMPGNDDLTLLVKRAEALSGFLKTDDGTNLLQGFKRANNILTQAEAKDGV 633 Query: 609 EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 E S P++ +AE+ L++ + I ++ + + + ++ PI+ FF+ V Sbjct: 634 EYSFGADPKFAETDAERALFSALETAEAAIGPALQAEDFAAAMSAMAALRAPIDAFFETV 693 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN D+ +R NRL++L I+ V ++ +I Sbjct: 694 QVNADNAVLRRNRLNMLHSIRATCARVADLTRI 726 >gi|254512072|ref|ZP_05124139.1| glycyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium KLH11] gi|221535783|gb|EEE38771.1| glycyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium KLH11] Length = 731 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 285/756 (37%), Positives = 412/756 (54%), Gaps = 82/756 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL + L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAGEDLKKRITEGLVEAGLTYASAAALTTPRRLTLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KA++GFLR GL D ++D KG VY A + K R Sbjct: 61 AESPTIREERKGPKVGAPDKAVEGFLRGAGL--TRDQLEERDTPKGPVYFATIEKTGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW W+RPL SILCIL +++A +++ L++ Sbjct: 119 AEIVAEVLEATIRNFPWPKSMRWGR-----GTMRWVRPLHSILCIL-SDEAGAQVVPLEV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G+ T GHRF AP V S ++Y L+ A V+L P R I NDA +A A G Sbjct: 173 EGIASGDTTEGHRFMAPARFAVTSFENYATKLKHAFVMLSPSERAEHIWNDAQNMAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V MG D ++L LP E+++ ++K +QK F + + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLMGQIDDEFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + SD GA I+ GN +V++ARL DA FW+ D L Sbjct: 293 ERFVTVANRETSDNGATILAGNQKVLSARLADAKFFWEND------------------LR 334 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++K LD + +D+ +V FH ++GTQ ER+ RI + +A++ D A +L+KA Sbjct: 335 IAK-LDMTVWTIDLQNVTFHNQLGTQAERIERIAAVAGALAEVTGVDARQAKDAALLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +++V EFPELQG +G+ Y EEH P GP ++VPT +S+TV+LA Sbjct: 394 DLSSQMVYEFPELQGLMGRYYLEAAGMRAELAAVAEEHYSPLGPSDDVPTAPLSVTVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DKLDTL +FWAI+EKP+GSKDP+ALRRA LG+IR+IL N + + L + Sbjct: 454 DKLDTLTSFWAIDEKPTGSKDPFALRRAALGVIRLILTNDLRLSLKETFASALRILLKLP 513 Query: 530 ----------------EDQ--------------------------NLILFFHDRLKLYLH 547 ED+ +L+ FFHDRLK++L Sbjct: 514 EWQAALLDAKAKQATAEDKDAAAQQVHGLAHQVEAANALVASVPGDLLSFFHDRLKVFLR 573 Query: 548 DRDIRHDLIEA-ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEK 605 D IRHD+I+A I ND+L +V + LN ++ GE + KR IL+ EEK Sbjct: 574 DEGIRHDIIDACIAMDGNDDLNLLVKRARALNAVIATEDGENLVQGFKRANNILSQAEEK 633 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 E S ++ ++EK L+A + I +++ + + + ++ P++ FF Sbjct: 634 DGVEYSYGPDIKFAETDSEKALFAALDGAQAKIDLALEAEDFPTAMTAMAALRAPVDAFF 693 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + V VN D+ +R NRL+LL I+ I V ++ KI Sbjct: 694 EDVQVNSDNDILRRNRLNLLNQIRQICADVADLTKI 729 >gi|86137955|ref|ZP_01056531.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. MED193] gi|85825547|gb|EAQ45746.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. MED193] Length = 741 Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust. Identities = 280/766 (36%), Positives = 404/766 (52%), Gaps = 92/766 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y + TP RL L L+GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRMTDGLVEAGLTYAGAAAFSTPRRLTLALEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL D +++ KG VY A++ KP R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGL--TRDQLEERETPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILC L E+ E ++ L++ Sbjct: 119 AEIIAEVLEATIRNFPWPKSMRWGA-----GSLRWVRPLHSILCQLSDENGSE-VVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V + Y L+ A V+LDP R+ AI +A A A G Sbjct: 173 DGIKAGTVTQGHRFMAPGEITVSGFEDYAAKLKRANVVLDPVERQEAIWQEAGNQAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V +G D ++L LP E+++ ++K +QK F + + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLLGDIDAEFLELPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F V+N + +D GA I+ GN +V++ARL DA FW+ D + + ++ + + Sbjct: 293 EGFFTVANRETADQGATILAGNQKVLSARLADAKFFWENDLRVAKSETGMEAWTGQLS-- 350 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+GTQ ER+ RI L ++IA ++ AD L ++A ++KA Sbjct: 351 ---------------NVTFHNKLGTQAERIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPQEVANACEMHYSPLGPSDDVPTEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + L +F + Q +L Sbjct: 456 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENNARMSLDRFFDGQ--LLRIES 513 Query: 541 RLKLYLHDRDI--------RHDLIEAILR---------------------PE-NDNLLT- 569 L L D I H + A R P+ +D+LL+ Sbjct: 514 ALDASLPDAGIASLLKEIAEHGVFGAAFRVVRDRLGENAERAFLDLETKVPDLSDDLLSF 573 Query: 570 -----------------IVD-------------LIKH---LNEFFSSAKGEKFLLSAKRI 596 ++D L+K L +F +S G L KR Sbjct: 574 FHDRLKVFLRDQGIRHDVIDACIAMAGNDDLTLLVKRARALEDFLNSEDGTNLLQGFKRA 633 Query: 597 FQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL EEK E S ++ ++EK L+A + I +++ + + + Sbjct: 634 NNILTQAEEKDGVEYSYGADVKFAEDDSEKALFAALEASEGAISAAIEAEDFAAAMGGMA 693 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ P++ FF+ V VN D VR NRL+LL I+ + V ++ +I Sbjct: 694 ALRGPVDAFFEAVQVNSDKEVVRRNRLNLLSQIRKVCGQVADLSRI 739 >gi|218462985|ref|ZP_03503076.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli Kim 5] Length = 418 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 228/416 (54%), Positives = 294/416 (70%), Gaps = 1/416 (0%) Query: 287 QKCFVTRTR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 QKCFVTR + E L+N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ NLP Sbjct: 1 QKCFVTRKQGEETLSNRFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLP 60 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 +L +L SA KF LDL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + Sbjct: 61 DLETLAASAAKFGLDLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAKELAAVTG 120 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 AD AL DRA VL+KADL TE V EFPELQG +G++YAVLQ EN S AIE+H KP+GP Sbjct: 121 ADAALTDRAAVLAKADLRTEAVGEFPELQGLMGRKYAVLQGENASVATAIEDHYKPQGPS 180 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + VP +K +IT++LADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL Sbjct: 181 DRVPEDKAAITLALADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPL 240 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 D +L+ FFHDRLK+YL D+ RHDLI+A+L P+ D+LL + ++ L F +S Sbjct: 241 LATTRDGDLLSFFHDRLKVYLRDQGARHDLIDAVLTPDADDLLMVARRVEALTAFITSED 300 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L KR Q+LA EEKK I+ +SP L L+AEK L+A IS +++ + Sbjct: 301 GKNLLAGTKRATQLLAAEEKKGTVIADGVSPALLKLDAEKELFAAISAASKDAADAVAGE 360 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + P++ FF++VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 361 DFRSAMEALSKLRGPVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 416 >gi|110679234|ref|YP_682241.1| glycyl-tRNA synthetase subunit beta [Roseobacter denitrificans OCh 114] gi|109455350|gb|ABG31555.1| glycyl-tRNA synthetase, beta subunit [Roseobacter denitrificans OCh 114] Length = 728 Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust. Identities = 276/760 (36%), Positives = 390/760 (51%), Gaps = 93/760 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++ EEIPARMQ +AA+DL ++ L E G+ Y + + TP RL L L+G+ Sbjct: 1 MPDLLIELFCEEIPARMQRRAAQDLQKLVTDGLVEAGLTYASAAAFSTPRRLTLTLEGVL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A KAI+GFLR G+ + +D KG V A + K R Sbjct: 61 AASPTTVEERKGPKADAPDKAIEGFLRGAGVA--REALETRDTPKGPVLFAKITKEGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW W+RPL SILCIL +++A +++ L + Sbjct: 119 AQIVAEVLEKTIRNFPWPKSMRWGA-----GTLRWVRPLHSILCIL-SDEAGTQVVPLSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V D Y L+ A V+LDP R + I +DA A A G Sbjct: 173 DHITAGDHTQGHRFMAPDRFTVTGFDDYAAKLKRAFVVLDPAERADMIWHDATNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAALLAEVAGLVEWPVVLMGRIGDDFLDLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW D Sbjct: 293 ERFVTVANRDTADNGATILAGNEKVLSARLADAKFFWDNDL------------------- 333 Query: 361 LSKPLDQRMARLDMLD-------VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 R+A+ M D V FH K+GTQ ER++R+ L +++A ++ AD + Sbjct: 334 -------RVAKAGMGDWLKALENVTFHNKLGTQAERIARVAALARELAPMVGADSDEAEE 386 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +KADL +E+V EFPELQG +G+ Y ++ + A EEH P GP + VPT + Sbjct: 387 AARFAKADLSSEMVYEFPELQGLMGRYYLKAAGKSDAIAAAAEEHYAPLGPSDAVPTASV 446 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S+ V+LADKLD WA NE P+GSKDPYALRRA L IR+ILEN++ +PL +E Sbjct: 447 SVAVALADKLDQFTGMWAANELPTGSKDPYALRRAALSTIRLILENRLKLPLKNLLEISF 506 Query: 531 -----------------------------------------------DQNLILFFHDRLK 543 L FFHDRLK Sbjct: 507 SDRYEIAKLEVKRSVERVAHRYPTEKAELKKILEEELLKISSTVDTRKNGLSEFFHDRLK 566 Query: 544 LYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA- 601 +YL D+ IRHD+I+A I P ND+L +V K L++ + GE + KR IL Sbjct: 567 VYLRDQGIRHDVIDACIAMPGNDDLTLLVKRAKALSDVVGTEDGENLIQGFKRANNILTQ 626 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 +E E S ++ + E+ L+ + I +M + + + ++ PI Sbjct: 627 AQEADGVEYSYGADAKFAETDEERALFKALDTAEAIITPAMKSEDFATAMSAMATLRAPI 686 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FF+ V VN D+ VR NRL+LL I I L V ++ +I Sbjct: 687 DAFFEAVQVNSDNPTVRRNRLNLLNRITQICLSVADLTRI 726 >gi|149201986|ref|ZP_01878960.1| glycyl-tRNA synthetase subunit beta [Roseovarius sp. TM1035] gi|149145034|gb|EDM33063.1| glycyl-tRNA synthetase subunit beta [Roseovarius sp. TM1035] Length = 749 Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust. Identities = 284/772 (36%), Positives = 405/772 (52%), Gaps = 96/772 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAA+DL L L E G+ Y + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQSKAADDLRARLTEALVEAGLTYAGAAAFSTPRRLALTVQGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A ++AI+GFLR GL T D +I+ D KKG VY A + KP R Sbjct: 61 GQSPTTREERKGPRVDAPEQAIEGFLRGAGL-TRDDLEIR-DEKKGQVYFATITKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ + I+ PWPKSMRW + W+RPL SILCIL E + ++DLD+ Sbjct: 119 AEIVAEELDKIIRNFPWPKSMRWGA-----GSLRWVRPLHSILCILTDEAGEVTVVDLDV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF A V S D Y L A V+L+ E R I +A A A G Sbjct: 174 DGIRAGNTTEGHRFMAAGRFAVSSFDDYRTKLRRAHVILEAEERAAHIWQEASNQAFASG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LL E+ GLVEW V MG D +L LP E+++ +++ +QK F + + Sbjct: 234 LELVEDPSLLAEVAGLVEWPVVLMGRIDDAFLGLPPEVLQTSMREHQKFFSVKNPKTGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D G I+ GN +V+AARL DA FW+ D L +L+ L+ Sbjct: 294 ERFVTVANVETADQGVTILAGNQKVLAARLSDAKFFWEND------LRTLQAEGLE---- 343 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + V FH K+G+Q +R++RI L ++IA + AD L ++A ++KA Sbjct: 344 --------GMGAGLAHVTFHNKLGSQADRIARIAALAREIAPHVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA A +EH P GP + VP+ +S+ V+LA Sbjct: 396 DLQSAMVGEFPELQGLMGRYYAAEAGLAPEVAAACQEHYSPLGPGDAVPSAPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--DQNLI--- 535 DK+DTL FWA+ ++P+GSKDP+ALRRA LGIIRII+ NK+ + LS I+ D +LI Sbjct: 456 DKIDTLTGFWAVPDEPTGSKDPFALRRAALGIIRIIIANKLRVRLSVGIDNTDSDLIEAG 515 Query: 536 --------------LFFHDRLKL-YLHDRDIRHDLIEAILRPEN---------------- 564 L +RL+ Y RD + EA + P N Sbjct: 516 EFSPIECAYLGHLDLGQPNRLRSNYWRLRDFGKLIAEASMDPYNRYCKQTLLGFGKGNRV 575 Query: 565 DNLLTIV----------DLIKH------------------------LNEFFSSAKGEKFL 590 ++LL+ + + I+H L++F + GE L Sbjct: 576 NDLLSFLHDRLKVHLREEGIRHDVIDACLAMPGNDDLTLLVQRARALSDFLKTDDGENLL 635 Query: 591 LSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL EEK E S ++ + EK L+A ++ I ++ + + + Sbjct: 636 QGFKRANNILTQAEEKDGVEYSYGADVKFAETDEEKALFAALATAEPAIANALKAEDFAR 695 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF V VN + + +R NRL+LL I+NI L ++ +I Sbjct: 696 AMGAMAALRAPIDAFFTAVQVNAESQVIRRNRLNLLSSIRNICLQAADLGRI 747 >gi|163738407|ref|ZP_02145822.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis BS107] gi|161388328|gb|EDQ12682.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis BS107] Length = 754 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 244/553 (44%), Positives = 331/553 (59%), Gaps = 35/553 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRMTDGLVEAGLTYAGAHALSTPRRLTLAMEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA KAI+GFLR G+ D ++D KG VY A++ KP R Sbjct: 61 EHSPTVREERKGPKVGAPDKAIEGFLRGAGV--TRDQLEERDTPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PW KSMRW T + W+RPL+SILCIL ED E ++ L++ Sbjct: 119 AEIIAEVLEDTIRNFPWSKSMRWGT-----GSLRWVRPLQSILCILSKEDGAE-VVPLNI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN TYGHRF AP I V D Y L+ A V+LDP R AI +A A A G Sbjct: 173 DGIASGNTTYGHRFMAPDQITVTGFDDYAAKLKRAHVVLDPAEREAAIRQEATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG+ D ++L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLMGAIDDEFLALPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D L ++ E + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWEND------LRTVTEQGFE---- 342 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 P ++ +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 343 ---PWVAKLG-----NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPQDVANACEAHYSPLGPSDDVPTEPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL---------SQFIED 531 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + + SQ I D Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENDLRLSIQPIYTQGIQSQQIVD 514 Query: 532 QNLILFFHDRLKL 544 Q L L R K+ Sbjct: 515 QALELLLETRTKV 527 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 2/171 (1%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FFHDRLK++L D+ IRHD+I+A + E ND+L +V + L +F +S G L Sbjct: 582 DLLSFFHDRLKVFLRDQGIRHDVIDACIAMEGNDDLTLLVKRARALEDFMASDDGPNLLQ 641 Query: 592 SAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR ILA EEK E S ++ ++E L+ ++ I +++ + + Sbjct: 642 GFKRANNILAQAEEKDGVEYSYGADKKFAEDDSEIALFDALASSEGAISSAIEAEDFAAA 701 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ P++ FF+ V VN D+ VR NRL+LL I+ + V ++ +I Sbjct: 702 MGSMAALRAPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVCGQVADLTRI 752 >gi|83945361|ref|ZP_00957709.1| glycyl-tRNA synthetase beta subunit [Oceanicaulis alexandrii HTCC2633] gi|83851195|gb|EAP89052.1| glycyl-tRNA synthetase beta subunit [Oceanicaulis alexandrii HTCC2633] Length = 711 Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust. Identities = 255/717 (35%), Positives = 400/717 (55%), Gaps = 72/717 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL EI+ EEIPARMQ +A EDL+ ++ LKE G+ + ++ + P RL + ++GL Sbjct: 1 MAQFLFEIFCEEIPARMQARAEEDLARLMSDRLKEAGLKWDSLEAFSGPRRLGVVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + + EER GPR A +KA++GF+R G+ ++ C+I++ KKG Y+AV+ KP R Sbjct: 61 LKTEDVREERKGPRTDAPEKALEGFMRGAGITSLDQCKIEEG-KKGSFYIAVIEKPGRET 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ +P ++ PWPKSM++ + A W+RPL+S++ +L + +I ++ Sbjct: 120 AEVIAEAIPDILKSFPWPKSMKFGKGET---AQRWVRPLRSLISLLDGQ-----VIKTEV 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G++T GHR H P V+ Y L + V+L + R+ +L+ A R+ G Sbjct: 172 FGINSGDVTDGHRIHGSGPFSVRDFADYEAKLRKNGVILRRDERKQLVLDGARRVCEEAG 231 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 LEL+ED+ LLEE+ GLVE +G D +L LP E+I LT+KT+QK F R + L Sbjct: 232 LELIEDQGLLEEVTGLVEHPAPILGDMDPDFLDLPPEVIALTMKTHQKYFAVRDPKSQRL 291 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLKESALKFN 358 + F++++N A DGG AI GN+RV++ARL DA HFW D + L ++S Sbjct: 292 TSKFVVLANQDAPDGGKAIAAGNARVLSARLSDARHFWDLDRKTGLEAMAS--------- 342 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 +L K V FH K+G+ ++V R+ L +++A ++ AD + ++A L+ Sbjct: 343 -ELGK-------------VTFHEKLGSVADKVERVAKLARELAPVVGADADMAEKAARLA 388 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +++V EFPELQG +G+ YA+ + DAI++H KP+GP ++VPT +S V+ Sbjct: 389 KADLVSQMVYEFPELQGAMGRYYALDAGLDPQIADAIKDHYKPQGPSDDVPTAPVSAAVA 448 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IRI+L+ + L + Sbjct: 449 LADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRILLDGDYRLALKKLFSPTVLDSAG 508 Query: 530 -----------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + +L+ F DRLK++L D ++HD+I+A+ +D+L+ + + L Sbjct: 509 GDGGVQGDMIAKRDDLLAFCADRLKVHLKDEGVKHDVIDAVFALGDDDLVRVTKKARALQ 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-----------------KNREISLEISPQYLLL 621 F +S G+ L +R IL EEK K+ + +L I+ Sbjct: 569 AFMNSDDGQALLQGYRRAANILTAEEKKGFDLASARAEAVSGSDKDTDAALMIAIAKTAD 628 Query: 622 EAEKR-LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE+R L A I ++ + + L + EP++ FF+ V+VN +D V Sbjct: 629 AAEERALIAAIEGADEVASVALTSEDFEGAMSALSQLREPVDAFFEAVVVNAEDSMV 685 >gi|332188373|ref|ZP_08390098.1| glycyl-tRNA synthetase, beta subunit [Sphingomonas sp. S17] gi|332011602|gb|EGI53682.1| glycyl-tRNA synthetase, beta subunit [Sphingomonas sp. S17] Length = 694 Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust. Identities = 265/731 (36%), Positives = 391/731 (53%), Gaps = 69/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPARMQ A E L+ + L + G+ + Y P RL L KGL Sbjct: 1 MTDFLLELRSEEIPARMQAGARESLAKLFTAELAKAGLSAGEIVTYAGPRRLALIAKGL- 59 Query: 61 PHSPEKIEERL-GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 P + E + E + GPR A +A++GFLR TGL ++ ++ V A+ KP R Sbjct: 60 PAATEAVSEEVKGPRASAPPQALEGFLRKTGLTR------EQLTERDGVLFAITEKPGRA 113 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 +VL +P ++ PWPKSMRW + + W+RPL +I+ + E ++ + Sbjct: 114 TAEVLAEAIPAIVRAFPWPKSMRWGAESASTESMRWVRPLHAIVALFGGE-----VVPFE 168 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I GN+T GHRFHAP I + D Y+ L A VL+D + R I A LA+ Sbjct: 169 VAGITSGNVTRGHRFHAPAEITLTGADTYVEQLRAAKVLVDQDERAAIIRERASALAAEA 228 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 GLELVED+ L+ E GL EW +G FD+ YL +P E+I+LT + NQK FV R+ +G L Sbjct: 229 GLELVEDEGLVAENAGLTEWPVPLLGRFDEAYLDVPPEVIQLTARVNQKYFVCRSADGKL 288 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+ +NI+A+DGG IV+GN +V+AARL DA F++ D LK L Sbjct: 289 ANAFVCTANIEATDGGTKIVEGNGKVLAARLSDARFFYETD--------------LKTKL 334 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIV 416 D +P + +VFH K+GT +V R+ L + +A + + D L RA Sbjct: 335 DDLRP--------KLEKIVFHEKLGTVAGKVERVAKLAEWLASEGIVPNCDSVLARRAAE 386 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL T +V EFPELQG +G YA Q E+ + +A+ +H KP G ++VP+ +++ Sbjct: 387 LAKADLVTGMVGEFPELQGLMGGYYAAAQGEDTAVAEAVRDHYKPVGQGDDVPSAPVTVA 446 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI--------------- 521 V+LADKLDT+++F++I+EKP+GSKDP+ALRRA LG+I ++L N + Sbjct: 447 VALADKLDTIVSFFSIDEKPTGSKDPFALRRAALGVIALVLSNGLRGSLYSLFHQSAPEA 506 Query: 522 -DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-------NLLTIVDL 573 D + Q + F DRLK+ +RHD+I+A++R D +L+ ++ Sbjct: 507 GDGDMGQVVAADYFYDFVIDRLKVQQRSEGVRHDVIDAVVRMGGDDDIGGERDLVRLLAR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQIL---AIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ L F ++ G L KR IL +E +N +P Y L AE L A Sbjct: 567 VRALQAFVTTDDGTNLLAGYKRAANILKKEGVEGDQNW-----TAPTYTLEPAEADLIAA 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +++ + + L S+ PI+ FFD V VN D R RL+LL ++ Sbjct: 622 LDAAEPKAAQAVKAEDFEAAMAALASLRAPIDRFFDDVTVNDADAVKRTARLALLARVRA 681 Query: 691 IILIVINVQKI 701 + V + +I Sbjct: 682 AVHTVADFSRI 692 >gi|163733327|ref|ZP_02140770.1| glycyl-tRNA synthetase subunit beta [Roseobacter litoralis Och 149] gi|161393115|gb|EDQ17441.1| glycyl-tRNA synthetase subunit beta [Roseobacter litoralis Och 149] Length = 742 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 272/768 (35%), Positives = 397/768 (51%), Gaps = 95/768 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ AA+DL ++ L E G+ Y + + TP RL L L+G+ Sbjct: 1 MPDLLIELFSEEIPARMQRHAAQDLQKLVADGLVEAGLTYASAAAFSTPRRLTLTLEGVL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A KAI+GFLR G+ + +D KG V A + K R Sbjct: 61 AASPTTVEERKGPKADAPDKAIEGFLRGAGV--TREALETRDTPKGPVLFAKITKEGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW T W+RPL SILCIL +++A +++ L + Sbjct: 119 AQIVAEVLEKTIRNFPWPKSMRWGT-----GTLRWVRPLHSILCIL-SDEAGTQVVPLSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V D Y L+ A V+LDP R + I +DA A A G Sbjct: 173 DLITAGDSTQGHRFMAPDRFSVTGFDDYTAKLKRAFVVLDPAERADMIWHDATNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG D+ +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEWPVVLMGRIDEAFLDLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW D L Sbjct: 293 ERFVTVANRDTADNGATILAGNEKVLSARLADAKFFWDND------------------LR 334 Query: 361 LSKP-LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 ++K + + + L+ +V FH K+GTQ E V R+ L +++A ++ AD + A L+K Sbjct: 335 VAKAGMGEWLKALE--NVTFHNKLGTQAELVDRVAALAREMAPMVGADPDEAEEAARLAK 392 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +E+V EFPELQG +G+ Y ++ + A +EH P GP + VPT +S+ V+L Sbjct: 393 ADLSSEMVYEFPELQGLMGRYYLKAAGKSDAIAAAAQEHYAPLGPSDAVPTAPVSVAVAL 452 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---------- 529 A+K+D L FWAI+EKP+GSKDP+ALRRA LG++R+ L N + I L + + Sbjct: 453 AEKIDKLTGFWAIDEKPTGSKDPFALRRAALGVVRLALGNGVRIDLERLLKLLVAEQLIG 512 Query: 530 ------EDQNLILFFHDRLKLY-------------------------------------- 545 ED+ + +R + Y Sbjct: 513 IARIKFEDEFEPVPIEERGRYYQGVLEFWRALEEFESLETKLRTSPDDEPLIIQGARSLL 572 Query: 546 --LHDR--------DIRHDLIEA-ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 LHDR IRHD+I+A I P ND+L +V K L++ + GE + K Sbjct: 573 TFLHDRLKVYLRDQGIRHDVIDACIAMPGNDDLTLLVKRAKALSDVVGTEDGENLIQGFK 632 Query: 595 RIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 R IL +E E S ++ + E+ L+ + I +M + + Sbjct: 633 RANNILTQAQEADGVEYSYGADIKFAETDEERALFEALDTAEAIITPAMKSEDFATAMSA 692 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF+ V VN D+ VR NRL+LL I I L V ++ +I Sbjct: 693 MATLRAPIDAFFEAVQVNSDNPTVRRNRLNLLSRITQICLSVADLTRI 740 >gi|16125591|ref|NP_420155.1| glycyl-tRNA synthetase subunit beta [Caulobacter crescentus CB15] gi|221234341|ref|YP_002516777.1| glycyl-tRNA synthetase subunit beta [Caulobacter crescentus NA1000] gi|13422689|gb|AAK23323.1| glycyl-tRNA synthetase, beta subunit [Caulobacter crescentus CB15] gi|220963513|gb|ACL94869.1| glycyl-tRNA synthetase beta chain [Caulobacter crescentus NA1000] Length = 692 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 270/721 (37%), Positives = 384/721 (53%), Gaps = 69/721 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++SEEIPARMQ +AA+DL + L G + + ++ + P RL L +GL Sbjct: 1 MPQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALKTFAGPRRLTLVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GPRVGA +A++GFLR GL D +++D VY+A + K R Sbjct: 61 LAQADRKEELKGPRVGAPPQAMEGFLRKAGL--TQDQLVERD----GVYMAFIEKKGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ PWPKSM W T W+RPLK ILC+L E ++ + Sbjct: 115 AEIIAEMVEAIVRGFPWPKSMIWGTKK-----LRWVRPLKRILCVLDRE-----VVPFAI 164 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I G++T GHRF P + D Y+ LE+ V+LD E R+ IL L A Sbjct: 165 EGIESGDVTEGHRFMGEAKPFVAKDFDEYVAGLEKHFVVLDVEERKARILEGCKTLCFAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGV 298 LELVED+ LL+E+ GL EW +G D +L LP E+IR +++T+QK F R E Sbjct: 225 HLELVEDQGLLDEVAGLAEWPTPVLGDMDPVFLSLPPEVIRTSMRTHQKYFAVRKAGEEG 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI ++NIQ +DGGA I GN++V+++RL DA FW + Sbjct: 285 LAPHFITIANIQPADGGAVIAAGNAKVLSSRLSDARFFW--------------------D 324 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 D+ + + +LD V FHAK+GT +RV RI L +IA L+ ADV A L+ Sbjct: 325 EDVKVGFEPWLKKLD--GVTFHAKLGTMAQRVERIVALAAEIAPLVGADVEKTKEAARLA 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +++V EFPELQG +G YA + DA+ +H KP+GP + VPT +SI V+ Sbjct: 383 KADLASQMVGEFPELQGIMGGYYARTFGLDHEIADAVRDHYKPQGPSDAVPTAPVSIAVA 442 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 LADKLDTL +F+AI EKP+GSKDPYALRRA LG IRIILEN I F Sbjct: 443 LADKLDTLASFFAIEEKPTGSKDPYALRRAALGAIRIILENNRKIGFRMFFVPYLDRMQA 502 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L+ FF DRLK+ L D+ RHDL++A+ +D+L IV Sbjct: 503 EWRAGVVTSPRLNADWLSISTELLAFFADRLKVTLRDQGKRHDLVDAVFALGDDDLARIV 562 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ L+ F + G+ L KR IL EEKK + + AE LY + Sbjct: 563 ARVEALDGFLKTDDGKNLLAGYKRASNILKAEEKKGALPTGAPAEPAADSAAEVGLYNAL 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +++++ + + L + P++ + D V VN + E RDNRL L +++ Sbjct: 623 RLLDKPLKDALAKEDFTGAMTQLAELRGPVDAYLDGVFVN--EPEHRDNRLRTLATVRDA 680 Query: 692 I 692 + Sbjct: 681 M 681 >gi|209964965|ref|YP_002297880.1| glycyl-tRNA synthetase, beta subunit GlyS [Rhodospirillum centenum SW] gi|238064854|sp|B6INH0|SYGB_RHOCS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|209958431|gb|ACI99067.1| glycyl-tRNA synthetase, beta subunit GlyS [Rhodospirillum centenum SW] Length = 714 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 273/741 (36%), Positives = 400/741 (53%), Gaps = 69/741 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+E++ EEIPARMQ +A ED ++ L G+ +Q + TP R+ L ++G+ Sbjct: 1 MAELLIELFMEEIPARMQVRAGEDFRRLVTDRLAAAGIQFQRAEVHTTPRRIALVVEGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG+ ++A+ GFLR+ GL IS + ++D KG Y AV+ KP Sbjct: 61 ARQADVREERKGPRVGSPEQALQGFLRAAGLTDISQAE-QRDTGKGVFYFAVIEKPGGAT 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL------------VA 168 D L ++ AI+ +PWPKSMRW T F W+RPL IL + A Sbjct: 120 IDALPALIDGAIRDLPWPKSMRWGTNQ-----FRWVRPLHGILALFDGQVVPGGLTIGTA 174 Query: 169 EDAKEK-------IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDP 221 E E + + I GN T GHRF +P + V S + Y L A V+LD Sbjct: 175 EPPPETSEGNACLAGEATARVIRYGNETKGHRFLSPDTLTVTSFEDYKAKLRGAHVILDR 234 Query: 222 ECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRL 281 E R+ IL A A A GL L +D LLEE+ GLVEW V +G D++++ +P E++ Sbjct: 235 EERKQLILAGARAAAEAEGLVLKDDPGLLEEVAGLVEWPVVLVGGIDEQFMDVPAEVLTT 294 Query: 282 TIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 +++T+Q+ F T +G LA F++V+N DGGAA+V GN RV+ ARL DA FW DQ Sbjct: 295 SMRTHQRYFALETTQGKLAPRFVVVANRPTVDGGAAVVAGNERVLRARLSDAKFFW--DQ 352 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA 401 DL+ PL+ R R + D+ FH K+GT ER RI L +IA Sbjct: 353 ------------------DLATPLETR--RQALADIKFHEKLGTMLERAERIEALAVEIA 392 Query: 402 QLIDADVALVDR---AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 + + D ++R A L KADL T +V EFPE+QG +G A Q+ DAI +H Sbjct: 393 RTLGLDTGALERVRIAARLCKADLVTGVVGEFPEVQGILGGHVARAQDLPADVADAIADH 452 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +P GP + VP + +++ V+LADK+DTL+ F+AI+EKP+GS+DP+ALRRA LG+IR+I+E Sbjct: 453 YRPLGPSDRVPADPVAVAVALADKIDTLVAFFAIDEKPTGSRDPFALRRAALGVIRLIVE 512 Query: 519 NKIDIPLSQFIE--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PE 563 N + L +L+ FF DRLK+ L ++ +RHDLI+A+ Sbjct: 513 NGLRASLLPLFGRAAVAVPAAAGETVGGDLLSFFADRLKVALKEKGVRHDLIDAVFGLGG 572 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE---ISPQYLL 620 D+L+ ++ + L F +S G L++ +R IL IEEKK+ +S I L Sbjct: 573 QDDLVLLLKRVDALAGFVASEDGANLLVAYRRAANILRIEEKKD-GVSYSGGGIDAGRLE 631 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 E+ L A + + + + + LL ++ P++ FFD+V VN D +R N Sbjct: 632 QAEERALAAALDATAADLAPLLAAEDFTGAMRLLSALRGPVDAFFDKVTVNAPDAVLRAN 691 Query: 681 RLSLLQYIKNIILIVINVQKI 701 RL LL I++ + V + +I Sbjct: 692 RLRLLARIRDTLNGVADFSRI 712 >gi|260433231|ref|ZP_05787202.1| glycyl-tRNA synthetase, beta subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260417059|gb|EEX10318.1| glycyl-tRNA synthetase, beta subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 739 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 229/532 (43%), Positives = 317/532 (59%), Gaps = 27/532 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL + L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQTRAGEDLKKRITDGLVEAGLTYAHAHALTTPRRLTLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR G+ D ++D KG VY A + KP R Sbjct: 61 AESPTIREERKGPKVGAPDKAIEGFLRGAGIS--RDQLEERDTPKGAVYFATIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILCIL +++A +++ +++ Sbjct: 119 AEIVAEVLADTIRNFPWPKSMRWGSGQ-----LRWVRPLHSILCIL-SDEAGAQVVPMEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V + Y L+ A V+L PE R I NDA LA A G Sbjct: 173 DGITAGDTTEGHRFMAPGRFAVTGFEDYAAKLKRAFVVLSPEERAEHIWNDAQNLAFATG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG D ++L LP E+++ ++K +QK F R Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLMGQIDDEFLDLPPEVLQTSMKEHQKFFSVRNPNTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D L K ++ Sbjct: 293 ERFITVANRETTDNGATILAGNQKVLSARLADAKFFWEND------LRVAKSDITQWTRA 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L +V FH K+GTQ +R+ RI L +++A + AD ++A L+KA Sbjct: 347 LE-------------NVTFHNKLGTQAQRIERIAALARELAPVTGADPDQAEKAARLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y E+ + +EH P GP ++VPT +S+TV+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYIEAAGEDAAVAAVAQEHYSPLGPSDDVPTAPLSVTVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR+IL N + + L ++ Q Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLILNNDLRLKLGGILDAQ 505 Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 2/172 (1%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 Q+L+ FFHDRLK++L D IRHD+I+A I ND++ +V + LN ++ GE + Sbjct: 566 QDLLSFFHDRLKVFLRDEGIRHDVIDACIAMDGNDDINLLVKRARALNVVIATEDGENLV 625 Query: 591 LSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL EEK E S P++ ++EK L+A + + I ++ + + Sbjct: 626 QGFKRANNILTQAEEKDGVEYSFGADPKFAETDSEKALFAALDEAQAKIASALAAEDFPA 685 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF+ V VN D+ +R NRL+LL I+ I V ++ KI Sbjct: 686 AMAAMAALRGPIDAFFEDVQVNSDNPVLRRNRLNLLSQIRQICSSVADLTKI 737 >gi|326387506|ref|ZP_08209114.1| glycine--tRNA ligase [Novosphingobium nitrogenifigens DSM 19370] gi|326208010|gb|EGD58819.1| glycine--tRNA ligase [Novosphingobium nitrogenifigens DSM 19370] Length = 668 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 264/703 (37%), Positives = 379/703 (53%), Gaps = 47/703 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ SEEIPARMQ +A DL + L+ G+ + + TP RL L + L Sbjct: 7 DFLLELRSEEIPARMQAQARADLERLFRKELEAAGLTPGEVAVWSTPRRLALVARALPLA 66 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + EE GPR A +A++GFLR TGL +D ++D V+ AVL KP R D Sbjct: 67 TAAVSEELKGPRTSAPPQALEGFLRKTGLS--ADQLTERD----GVWFAVLEKPGRATVD 120 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL +P I+ PWPKS RW + W+RPL I+ +L E I+ ++ Sbjct: 121 VLAAAIPAIIRAFPWPKSQRWGAASLSSESLRWVRPLSGIVALLGGE-----IVPCEVAG 175 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G T+GHRFH PI + ++ Y L A V++D R + + A + A+ GL Sbjct: 176 IVAGRETFGHRFHHSGPIAIDGVEDYADKLRAAHVIVDHAEREATVRDGARKAATEAGLV 235 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK F+ R G LAN Sbjct: 236 LVEDEGLVIENAGLTEWPVPLLGRFDEAFLAVPPEVIQLTARVNQKYFICRDAAGKLANA 295 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F+ +NI A DGG AIV GN +V+AARL DA FW++DQ Sbjct: 296 FVCTANIVAKDGGEAIVAGNRKVLAARLSDARFFWEQDQKT------------------- 336 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 PL Q+ +L + FH K+GT ++V+R+ L + +A+ + AD A A L K Sbjct: 337 -PLAQQAEKLARIK--FHEKLGTVADKVARVADLAESLARDGVVPGADPAQARLAAELCK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G YA ++ + DA+ +H KP G ++VPT +++ ++L Sbjct: 394 ADLVTEMVGEFPELQGLMGGYYARVEGLPDAVADAVRDHYKPVGQGDDVPTAPVTVALAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL +F+AI+EKP+GSKDP+ALRRA LG+IR+I +N + L + +L+ FF Sbjct: 454 ADKLDTLRSFFAIDEKPTGSKDPFALRRAALGVIRLITDNGLRFGLGE----GDLLAFFA 509 Query: 540 DRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK+ + +RHDLI+A+L D+L+ ++ + L F ++ G L KR Sbjct: 510 DRLKVQQREAGVRHDLIDAVLALGGEDDLVRLLARVHALQAFVATEDGVNLLAGYKRAAN 569 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 IL +E + Y AE L ++ G ++ + + L S+ Sbjct: 570 IL------KKETWEPLPRNYEPDAAEAALAEALAVAGPKADAAVAAEDFTGAMGALASLR 623 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FFD V VN D R NRLSLL + + V + +I Sbjct: 624 APIDAFFDDVTVNDADAHKRANRLSLLDLFRAAVHKVADFSRI 666 >gi|197104831|ref|YP_002130208.1| glycyl-tRNA synthetase, beta subunit [Phenylobacterium zucineum HLK1] gi|238690133|sp|B4R9A9|SYGB_PHEZH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|196478251|gb|ACG77779.1| glycyl-tRNA synthetase, beta subunit [Phenylobacterium zucineum HLK1] Length = 669 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 259/707 (36%), Positives = 393/707 (55%), Gaps = 44/707 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE+ SEEIPARMQ +AA DL + L EG++ + ++ + P RL L +GL Sbjct: 1 MPQLLLELLSEEIPARMQAQAARDLERLARERLAAEGLLPEALKTFAGPRRLTLVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GP+VGA ++A++GFLR TGL D +++D V+ A + KP R Sbjct: 61 AAQADRREELKGPKVGAPEQALEGFLRKTGL--TRDQLVERD----GVFFATIEKPGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ PWPKSM T S W+RPL+ ILC+ E ++ ++ Sbjct: 115 PEIVAEMVEAILRTFPWPKSMVSGT-----SKLRWVRPLRRILCVFDGE-----VVPFEV 164 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I G+++ GHRF + P V+ + Y L V+LD + R+ IL A L A Sbjct: 165 DGIASGDLSEGHRFMSDGQPFLVKDFEGYAAGLSHRSVVLDADERKERILEAAKTLCFAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGV 298 LELVED LL+E+ GLVEW +G D +L LP E+IR +++ +Q+ F R G Sbjct: 225 NLELVEDAGLLDEVAGLVEWPVPVLGDMDPAFLDLPPEVIRTSMRVHQRYFAVRDPAGGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA F+ V+NI A DGGA I +GN++V++ARL DA FW D+ Sbjct: 285 LAPHFLTVANIAARDGGATIAKGNAKVLSARLSDARFFWDEDRKVR-------------- 330 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV-- 416 L+ R+ +L V FHAK+GT ERV RI L ++A + + +A+ Sbjct: 331 ------LEDRLEKLK--GVTFHAKLGTMYERVQRIEALAGELAPFVRDEPETRTKAVQAA 382 Query: 417 -LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL + +V EFPELQG +G YA + + DAI H +P+GP + VP + ++ Sbjct: 383 RLAKADLVSGVVGEFPELQGIMGGYYAEAEGLDPEVVDAIRSHYRPQGPNDAVPVSSVAA 442 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 TV+LADKLDTL++F+ I EKP+GS+DP+ALRRA LG+IRI+LE + +PL +F+ D+ ++ Sbjct: 443 TVALADKLDTLVSFFGIGEKPTGSRDPFALRRAALGVIRIVLETRTRLPLKRFVSDE-VL 501 Query: 536 LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 FF DRL + L ++ RHDL+ A+ +D+L+ IV ++ L+ F + G L KR Sbjct: 502 DFFADRLAVLLREQGKRHDLVAAVFALGDDDLVRIVARVEVLSAFLKTEDGANLLAGYKR 561 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL EEKK + E + E L ++ + +++ + + L Sbjct: 562 AVNILRAEEKKGPLPAGEPAQAAGAPAEEAALVQAVAALDARLGPALEREDFEGAMTELA 621 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + P++ FFD+VLVN D R+NRL LL +++ + V + ++ Sbjct: 622 KLRGPVDAFFDKVLVNSDVPAERENRLRLLAKVRDAMGRVADFSQVT 668 >gi|304320092|ref|YP_003853735.1| glycyl-tRNA synthetase subunit beta [Parvularcula bermudensis HTCC2503] gi|303298995|gb|ADM08594.1| glycyl-tRNA synthetase beta subunit [Parvularcula bermudensis HTCC2503] Length = 688 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 269/717 (37%), Positives = 390/717 (54%), Gaps = 47/717 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPAR+Q + A DL ++ LL E + + + T RL L + GL Sbjct: 1 MSDLLLELFSEEIPARLQQRGAADLQRLVTDLLSAEALAFDEAVAFATARRLTLRVTGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EER GPRVGA KAI+GF+++ GL +I + +K+D KG Y+AV+ + R Sbjct: 61 DAQADRREERKGPRVGAPDKAIEGFMKAAGLASIDEAIVKED-GKGAFYVAVIDQRGRRT 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L +P ++ PWPKSMRW + + + W+RPL SILC E ++ L Sbjct: 120 ADLLAERLPQLLKTFPWPKSMRWGESENEL---RWVRPLHSILCTFGGE-----VVPFTL 171 Query: 181 ----KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + I G T GHRF AP + + + Y L V+LD R I +A LA Sbjct: 172 ENGERPITSGACTAGHRFEAPETFEATTFEDYCETLLARKVILDGARREEKIWAEATALA 231 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TR 295 SA GLE++ D LL E+ GL EW MG FD+K+L +P+E + ++ +QK F R + Sbjct: 232 SAAGLEVIADPGLLAEVSGLAEWPVARMGRFDEKFLAVPDEALIAAMRGHQKYFSVRDPK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G LA FI V+NI +DGG A+++G RV+AARL DA W Sbjct: 292 TGRLAPHFICVANIDPADGGQAMMEGYERVLAARLSDA---W-----------------F 331 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 ++ DL PL Q RL DV + +GT E+V R L +++A + A A A Sbjct: 332 LYHQDLKTPLAQHAERLK--DVTYFDGLGTTWEKVGRTADLAERLALALGAAPAAARGAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENI---SCCDAIEEHLKPRGPLENVPTNK 472 +L KADL TE+V EFPELQG + + Y + + + +A+ +H KP G + VPT Sbjct: 390 LLCKADLPTEMVGEFPELQGIMARYYYLAETGTAADPAIAEALRDHYKPAGQGDLVPTAP 449 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-------PL 525 +S+TV+LADKL TL FW+I EKP+GSKDP+ALRR LG+I+++LEN + PL Sbjct: 450 LSVTVALADKLTTLAMFWSIGEKPTGSKDPFALRRMALGVIQLVLENGARLSLRDSVAPL 509 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +L+ FFHDRL++YL ++ R+D IEA+L P++D+L IV + ++ F ++ + Sbjct: 510 LDTKAQADLLGFFHDRLRVYLKEKGHRYDHIEAVLTPDSDDLGLIVTRLHAIDRFLATPE 569 Query: 586 GEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 G + + KR IL EEKK EI L E+ LY + + ++ Sbjct: 570 GGDLVAAYKRAANILKAEEKKEGGPFGGEIDTAQLEAAEEQALYTALEGVEAALAAALPK 629 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ EP++ FF +V VNV+ E+R NRLSLL + V + K+ Sbjct: 630 DDITAALAALSSLREPLDRFFTEVTVNVEAPELRKNRLSLLHRLALAFGDVADFAKL 686 >gi|163798103|ref|ZP_02192041.1| Glycyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159176640|gb|EDP61216.1| Glycyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 701 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 255/728 (35%), Positives = 378/728 (51%), Gaps = 92/728 (12%) Query: 33 LKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQ 92 LK G+ + Y TP RL L + GL P++ EER GP+VG+ KA+ GF+++ G++ Sbjct: 5 LKAGGLTFATAEAYVTPRRLALVVDGLPASQPDRTEERKGPKVGSPDKALQGFMKAAGIE 64 Query: 93 TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 TI +++ KGD Y AV P +E L + AI ++PWPKSMRW Sbjct: 65 TIEQAEVRSS-DKGDFYFAVRHIPGAPLERYLPYPLFEAISEMPWPKSMRWGRND----- 118 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLK----------EIPCGNI-----TYGHRFHAP 197 F W+RPL IL ++ K +DLD + P G I + GHRF AP Sbjct: 119 FRWVRPLHGILAMV-----DGKTLDLDFQLLRTQEEARNPTPAGTIKASGESRGHRFLAP 173 Query: 198 HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV 257 P V S Y L +A V+LD E R+ I + LA GL ED+ LLEE+ GLV Sbjct: 174 EPFAVASFADYRAKLRDAFVILDREERKRIIADGIAALAKEAGLVAKEDQGLLEEVCGLV 233 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDG-GA 316 EW +G D +++ +P+E++ +++++QK F T +G LA+ F++V+N+ + A Sbjct: 234 EWPVPMLGRIDAQFMGVPKEVLVTSMRSHQKYFALETADGALADRFVVVANMASEPTRDA 293 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 IV GN +V+ ARL DA FW DQ DL PL R R + Sbjct: 294 TIVAGNEKVLRARLSDAKFFW--DQ------------------DLKTPLANR--REALRT 331 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 V F+ ++GT ++V R L +I + I AD LV RA LSKADL T +V EFPELQG Sbjct: 332 VKFYDRLGTMADKVQRFAQLAVEIGERIGADGDLVRRAATLSKADLTTGMVSEFPELQGI 391 Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G+ YA+ E+ S +AI EH P GP + PT +S+ V+LADK+DTL+ F+AI E P Sbjct: 392 MGRYYALDAGEDPSVGEAIAEHYSPLGPSDRCPTAPVSVAVALADKIDTLVGFFAIGETP 451 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------------------------- 531 +GSKDP+ALRRA LG+IR+I+EN + +PL Sbjct: 452 TGSKDPFALRRAALGVIRLIIENNLRVPLVDLFASAFGRLPRDVVDASLESAAAKLGGGE 511 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLI 574 Q L+ FF DRLK++L ++ +RHDLI A+ + D+L+ ++ + Sbjct: 512 VPAGWYTEFTVLPFIRQELLGFFADRLKVHLREQGVRHDLIAAVFELGDEDDLVRLLARV 571 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISD 633 L +F + G L +R IL EEKK+ S E L+L E LY ++ Sbjct: 572 HALADFLGTEDGANLLTGFRRASNILRAEEKKDGVSHSAEPEAHRLVLSEETALYEALAA 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ ++ + + L ++ PI+ FF++V VN DD ++R NRL +L +++ + Sbjct: 632 AEPVLESALKAEDFAGAMATLATLRSPIDAFFEKVTVNADDADLRVNRLRILAQVRDAMG 691 Query: 694 IVINVQKI 701 V + ++ Sbjct: 692 RVADFARV 699 >gi|114570728|ref|YP_757408.1| glycine--tRNA ligase [Maricaulis maris MCS10] gi|114341190|gb|ABI66470.1| glycyl-tRNA synthetase beta chain [Maricaulis maris MCS10] Length = 738 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 225/542 (41%), Positives = 319/542 (58%), Gaps = 33/542 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L EI+ EEIPARMQ +A DL +L LK G+ + ++R + RL L + GL Sbjct: 1 MSELLFEIFCEEIPARMQPRAEADLEKLLGDRLKAAGLAWTSLRTFAGARRLGLVIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + + EER GPRVGA KA++GFLR G+ ++ C+ + D KKG+ ++A + KP R Sbjct: 61 VKTADVSEERKGPRVGAPDKAVEGFLRGAGVASLDQCEKRAD-KKGEFWVARIEKPGRAS 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ +P ++ PWPKSM++ A W+RP++ +LC+ ++ +++ Sbjct: 120 AEVIAESIPDMMKAFPWPKSMKFGEGEK---AQRWVRPIQRLLCVF-----DGNVVPVEV 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAV 239 I N+T GHR P V + Y LE E VLLD R + ILN A ++ Sbjct: 172 FGITASNVTEGHRRMGRGPFTVSNFLEYATVLEGEGHVLLDRAARESLILNGARKVCVDA 231 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGV 298 G ELVED LL E+ GLVEW +G D +L LP E+I LT+KT+QK F R + G Sbjct: 232 GFELVEDAGLLTEVAGLVEWPVPVLGEMDPDFLDLPPEVITLTMKTHQKYFAVRDPKTGE 291 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F+ ++N A DGG AI GN+RV++ARL DA HFW D+ Sbjct: 292 LVSKFVTIANQVAPDGGVAIAAGNARVLSARLSDARHFWDNDRKT--------------- 336 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 PL A+L V FH K+GT ++V R+ L +++A ++ AD L RA L+ Sbjct: 337 -----PLSDMAAQLSK--VTFHEKLGTVADKVERVAALAEELADVVGADKKLARRAAELA 389 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA+ Q E+ + DAI++H KP+GP + VPT +S V+ Sbjct: 390 KADLVSEMVYEFPELQGAMGRYYALDQREDAAVADAIKDHYKPQGPSDEVPTAPVSAAVA 449 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IRI+LE +PL + I + +L Sbjct: 450 LADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRILLEAGTRVPLLEQILEHVRVLAL 509 Query: 539 HD 540 D Sbjct: 510 RD 511 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 11/200 (5%) Query: 509 TLGIIRIILENKIDIPLSQFIEDQ----NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 T+G + + LEN P ++ E +L+ FF DRLK++L D RHD+I+A+ + Sbjct: 541 TIGALELGLEN-YSAPGARTRETSRLGADLLSFFADRLKVHLRDEGTRHDVIDAVFALGD 599 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL--- 621 D+L+ + + L F + G L KR ILA K +++ E YL Sbjct: 600 DDLVRVTHKARALQAFLDTEDGAALLAGNKRASNILA---KSEGDLTGEADAGYLAGAPE 656 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 AE+ L A ++ G ++++ + + L + PI+ FF+QV VN DD +R NR Sbjct: 657 SAERDLIAALNTAGPAAEKALADEDFAAAMRALSQLRAPIDAFFEQVTVNTDDAALRRNR 716 Query: 682 LSLLQYIKNIILIVINVQKI 701 L LL I+ I V + KI Sbjct: 717 LLLLSAIRTAIRAVADFDKI 736 >gi|83594287|ref|YP_428039.1| glycine--tRNA ligase [Rhodospirillum rubrum ATCC 11170] gi|123525869|sp|Q2RQ43|SYGB_RHORT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|83577201|gb|ABC23752.1| Glycine--tRNA ligase [Rhodospirillum rubrum ATCC 11170] Length = 721 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 264/737 (35%), Positives = 390/737 (52%), Gaps = 78/737 (10%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +A EDL+ ++ L E G+ + +R + TP RL L + GL P+ EER G Sbjct: 13 IPARMQVRAIEDLTKLVGTGLAEAGLSHGGLRGFVTPRRLTLVVDGLPVAQPDVHEERRG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P+ A KAI GFL S GL T + ++ PK G AV+ + R +VL I+ A+ Sbjct: 73 PKADAPDKAIAGFLGSLGL-TRDQLETRETPK-GPFLFAVIERKGRPTAEVLPEIIYRAL 130 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI-IDLDLKEIPCGNI--- 188 + WPKSMRW+ F+W+RPL SIL + + I + + L+ +P G I Sbjct: 131 TALSWPKSMRWARGQ-----FTWVRPLHSILAVFEGAPLRGAIGLGVSLEGLPVGFIADP 185 Query: 189 ---------------TYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 T GHRF AP P V+ Y L +A VL+D E R+ I A Sbjct: 186 AAAPEGTPLLAFGATTRGHRFLAPEPFPVRDFADYAARLRQAHVLIDREERKRVIAERAA 245 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA+ GL + +D LLEEI GLVEW MG DK ++ +P E++ +++++QK F Sbjct: 246 ALAAGEGLRVKDDPALLEEITGLVEWPVPLMGHIDKAFMDVPAEVLTTSMRSHQKYFSVE 305 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L F++VSN+ A+D A +V GN RV+ ARL DA FW +D+ Sbjct: 306 NADGTLNARFVVVSNMDATDSSARVVAGNERVLRARLSDAKFFWDQDRK----------- 354 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVD 412 PL ++ L VFHAK+G+ ++V+R+R +A + AD +LVD Sbjct: 355 ---------APLAGKVEALGAR--VFHAKLGSDLDKVTRVRAGAAWLAARVPGADASLVD 403 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +L+KADL T +V EFPELQG +G+ YA+ E + AI +H P GP + PT Sbjct: 404 RAALLAKADLTTGMVGEFPELQGLMGRYYALHDGEPPAVAQAIRDHYSPVGPGDACPTAA 463 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 S+ V+LADK+DTL FW I+EKP+GSKDP+ALRRA LG+IR+I+EN + +PL + + Sbjct: 464 TSVCVALADKIDTLAGFWLIDEKPTGSKDPFALRRAALGVIRLIVENSLRLPLREVLGSA 523 Query: 531 -----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDN 566 + +LI F +RLK+ ++ +RHDLIEA+ + D+ Sbjct: 524 ISTYGDRMLAQCGKADGTSSDVIEHDLIAFIAERLKVQQREKGVRHDLIEAVFSQGGEDD 583 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA--E 624 L+ ++ + L +F +S +G L + +R I+ IEEKK+ + + P L E E Sbjct: 584 LVRLLARVSALADFLASEEGTNLLSAYRRATNIVRIEEKKDGK-PVSGDPDNALFEQDEE 642 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + L + + S+ + + L + P++ FFD+V VN D +R+NRL L Sbjct: 643 RALSLALDTLLGEVSPSLAAEDHAAAMRALARLRGPVDAFFDRVTVNADTPALRNNRLRL 702 Query: 685 LQYIKNIILIVINVQKI 701 L I + + + KI Sbjct: 703 LARIGTAMATLADFSKI 719 >gi|154251184|ref|YP_001412008.1| glycyl-tRNA synthetase subunit beta [Parvibaculum lavamentivorans DS-1] gi|154155134|gb|ABS62351.1| glycyl-tRNA synthetase, beta subunit [Parvibaculum lavamentivorans DS-1] Length = 741 Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust. Identities = 269/762 (35%), Positives = 389/762 (51%), Gaps = 108/762 (14%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +A EDL ++ LK GV +N R + TP RL L + GL +P+ EER G Sbjct: 13 IPARMQKRAGEDLVRLVTDALKAAGVEGKNARAFATPRRLALVIDGLPDKTPDVKEERKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P+VGA ++AIDGFLR+ GL +I + +++D KKG Y+AV K R ++ IVP I Sbjct: 73 PKVGAPQQAIDGFLRAAGLASIDEATVQED-KKGAFYVAVTEKQGRDTAALIAEIVPAVI 131 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 + PWPKSMRW + + W+RPL SILC+L K+++ ++ I GN T GH Sbjct: 132 RAFPWPKSMRWGS-----GSLRWVRPLHSILCLLGG-----KVVNFEVDGIKSGNTTRGH 181 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 RF AP V Y L +A V+LDP R + I A LA A GL LVED+ LL E Sbjct: 182 RFMAPDAFVVTDFADYEMKLLDAKVVLDPAKRAHFIHAGAKALAEAEGLVLVEDEALLHE 241 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GLVEW +G D +++ +P+E++ T++ NQK F + G LA F++++N++A Sbjct: 242 VAGLVEWPVPLIGRIDDEFMSVPQEVLTSTMRANQKYFALHDKTGKLAPRFVVIANLEAE 301 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 DGG AIV GN RV+ AR DA W +D+ + L R+ +L Sbjct: 302 DGGKAIVNGNERVLRARFADARFLWDQDRKHT--------------------LTSRLPKL 341 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALVDRAIVLSKADLCTEIVRE 429 +VVFHAK+GT ++ RI L +++A + D D A + A L+KADL T +V E Sbjct: 342 Q--EVVFHAKLGTVHDKAMRIGKLARELAAFVPGADPDKAQI--AGELAKADLTTGMVGE 397 Query: 430 FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINF 489 FPELQG +G YA + AI EH P GP + VP + V+LADK+DTL+ F Sbjct: 398 FPELQGLMGAYYARNDGLDDEIAAAIAEHYAPLGPTDAVPLTPLGRVVALADKIDTLVGF 457 Query: 490 WAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-QNLILFFHDRLKLYL-- 546 WAI+EKP+GSKDPYALRRA LG+IR+++E +I + L Q E QN + +++ + L Sbjct: 458 WAIDEKPTGSKDPYALRRAALGVIRVVMEGQIRLSLVQIFETAQNELRLSTEQVSVELLN 517 Query: 547 ------------------------HDRDIRHDLIEAILRP--------ENDNLLTIVDLI 574 H+R +R + I E+ L D + Sbjct: 518 KSDAKESDTLGLDLGAKSLGYASVHERSVRGASVRVIRSGRRVFGESIESQLLSFFADRL 577 Query: 575 K---------H--LNEFFSSAKGEKFLLSAKRI---FQILAIEEKKN------------- 607 K H ++ F+ + +L KR+ + LA E+ KN Sbjct: 578 KIYLRDRGARHDLVDAVFALEGQDDLVLIVKRVEALSEFLATEDGKNLLAGYKRATNILR 637 Query: 608 ------REISLEISPQYLLL--EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 E + +P L + EK L A I + ++ + + L + Sbjct: 638 IEERKDGEGAFNAAPDASLFAQDEEKALGAAIEAATKEAKAAVAKEDFAAAMSALAKLRA 697 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF++V VN DD +R NRL LL I+ + V + K+ Sbjct: 698 PVDAFFEKVTVNADDAALRANRLKLLAQIRAALHEVADFSKV 739 >gi|126735419|ref|ZP_01751165.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. CCS2] gi|126715974|gb|EBA12839.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. CCS2] Length = 758 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 235/608 (38%), Positives = 346/608 (56%), Gaps = 54/608 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L E G+ Y + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQTRAADDLRKLVTDGLVEAGLTYAGAAAFSTPRRLALSVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GP+VGA KAI+GFLR G+ D +++ D K G VY AV+ KP R+ Sbjct: 61 AESKAVREERKGPKVGAPDKAIEGFLRGAGVAR-EDLEVRDD-KNGQVYFAVIEKPGRMA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ ++ PWPKSMRW + W+RPL +ILCIL +++A +++ L++ Sbjct: 119 ADIIAEVLEKTVRNFPWPKSMRWGNGN-----LKWVRPLHAILCIL-SDEAGTEVVPLEV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP V + D Y L+ A V+L + R AI +A A A+G Sbjct: 173 DGIKSGNTTQGHRFLAPDAFTVANFDDYEAKLKRANVVLRADERAEAIWAEATTQAFALG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L++VED+ LL E+ GLVEW V +G D +L LP E+++ ++K +QK F R + Sbjct: 233 LDVVEDRGLLAEVAGLVEWPVVLLGQIDDAFLGLPPEVLQTSMKEHQKFFSVRNPKTERI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D G I+ GN +V++ARL DA FW+ D + ++ ++ LD Sbjct: 293 ERFVTVANMETADNGTTILAGNQKVLSARLADAKFFWENDLR-------VAKAGMQPWLD 345 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+G+Q +R+ RI L ++IA + AD L +A ++KA Sbjct: 346 ------------SLANVTFHNKLGSQKDRIERIAALAREIAPSVGADPDLAAQAAKVAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + A EEH P GP ++VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYAAEAGLDAQVAAACEEHYSPLGPSDDVPTAPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----EDQNLIL 536 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + ++ L Sbjct: 454 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENGHRCVIGDLVVTAYQEHALAW 513 Query: 537 FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 RL+ YL P+N+ K + +FF GE L + Sbjct: 514 AKQYRLRRYLD--------------PQNE---------KGVTDFFEGVDGEDRFLGKDAV 550 Query: 597 FQILAIEE 604 LA E+ Sbjct: 551 NAALAHEK 558 Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 93/172 (54%), Gaps = 2/172 (1%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 ++L+ FFHDRLK++L D+ IRHD+I+A I P ND+L +V + L ++ GE + Sbjct: 585 RDLLSFFHDRLKVFLKDKGIRHDIIDACIAMPGNDDLTLLVKRAEALAATLATDDGENLI 644 Query: 591 LSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL EEK E S ++ EAEK L+A + I +M + + Sbjct: 645 QGFKRANNILTQAEEKDGVEYSYGADIKFAEDEAEKALFAALDAADAKIAPAMKAEDFST 704 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF V VN + +R NRL+LL I+NI L V ++ KI Sbjct: 705 AMTAMAALRAPIDAFFTDVQVNAESEILRRNRLNLLSRIRNICLSVADLTKI 756 >gi|167646138|ref|YP_001683801.1| glycyl-tRNA synthetase subunit beta [Caulobacter sp. K31] gi|167348568|gb|ABZ71303.1| glycyl-tRNA synthetase, beta subunit [Caulobacter sp. K31] Length = 728 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 267/756 (35%), Positives = 387/756 (51%), Gaps = 103/756 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++SEEIPARMQ AA DL + L G + Q ++ + P RL L ++GL Sbjct: 1 MPQLLLELFSEEIPARMQAAAARDLERMAHEHLAAAGFLPQALKTFAGPRRLTLVVEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GPRVGA +A++GFLR GL D +++D V++A + K R Sbjct: 61 IAQADRKEELKGPRVGAPPQALEGFLRKAGL--TQDQLVERD----GVWMAFIEKTGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ WPKSM W + W+RPLK ILC+ +++ + Sbjct: 115 PEIVAEMVETIVRGFAWPKSMTWGSGK-----LRWVRPLKRILCVF-----DREVVPFAI 164 Query: 181 KEIPCGNITYGHRFHAPHP------IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + I G++T GHRF P K + D Y + L + V+LD E R++ IL Sbjct: 165 EGIESGDVTEGHRFMRVGPGWGGQAFKARDFDEYAKGLLDHFVVLDVEERKSRILEGCKT 224 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR- 293 L A LELVED LLEE+ GL EW +G D +L LP E+IR +++T+QK F R Sbjct: 225 LCFARNLELVEDLGLLEEVAGLAEWPTPVLGDMDPVFLDLPAEVIRTSMRTHQKYFAVRD 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G LA FI ++N+Q++DGG I +GN++V+++RL DA FW D Sbjct: 285 PATGGLAPHFITIANVQSADGGKVIAEGNAKVLSSRLSDARFFWDED------------- 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +K + LD L+ V FHAK+GT ERV RI L ++IA L+ AD Sbjct: 332 -VKVGFE---------PWLDKLNGVTFHAKLGTMAERVERIVALAREIAPLVGADPDKAA 381 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+KADL +++V EFPELQG +G YA + D I +H KP+GP + VPT Sbjct: 382 EAARLAKADLTSQMVGEFPELQGLMGGYYARAAGMDPEIADTIRDHYKPQGPSDAVPTAP 441 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE-------------- 518 +S+ V+LADKLDTL+ F+AI+EKP+GSKDP+ALRRA LG+IR +L+ Sbjct: 442 LSVAVALADKLDTLVGFFAIDEKPTGSKDPFALRRAALGVIRTLLDVGARLPLFEVLSTA 501 Query: 519 --------------------------------NKIDI---------PLSQFIEDQNLILF 537 N I I P+ + + D IL Sbjct: 502 HVQLASQVSGKRLEDDRWARYQAAKLLGVVDKNAIPIDCTVRVGVDPIEERLSDVRAILE 561 Query: 538 FH-DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 F DRLK+ L D+ RHDL++A+ +D+L+ IV ++ L+ F + G+ L KR Sbjct: 562 FFADRLKVTLKDQGKRHDLVDAVFALGDDDLVRIVARVEALDGFLKTDDGKNLLAGYKRA 621 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL EEKK + + E E LY + + E+MD ++ L Sbjct: 622 SNILKAEEKKGWKGEGVAALPPSASEPEIALYDAVRVVQRPLAEAMDADNFNAAMQRLAG 681 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + P++ F D V VN D + R++RLS L ++ + Sbjct: 682 LRSPVDAFLDGVFVNSDIKVERNSRLSTLAAVRQAM 717 >gi|254450582|ref|ZP_05064019.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 238] gi|198264988|gb|EDY89258.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 238] Length = 741 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 226/530 (42%), Positives = 318/530 (60%), Gaps = 30/530 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAA DL ++ L + G+ Y + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQAKAAADLQKLVADGLVDAGLTYAGAGAFCTPRRLALSIEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP+VGA AIDGF R G+ D +D KG+VY AV++KP R Sbjct: 61 AESPDTREERKGPKVGAPDGAIDGFCRGAGVS--RDALEARDTGKGEVYFAVIQKPGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ AI+ PWPKSMRW T + W+RPL SI+CIL E E ++ + + Sbjct: 119 ADIIAEVLEGAIRNFPWPKSMRWGT-----GSLKWVRPLHSIVCILTDEGGAE-VVAMSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP V S D Y L+ A V+L + R + I ++A A A G Sbjct: 173 DGIAAGNTTRGHRFMAPDEFSVTSFDDYEAKLKRAKVILRSDERADMIWSEASNQAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELV+DK LL E+ GLVEW V MG+ +L LP E++ ++K +QK F R + G + Sbjct: 233 LELVDDKGLLAEVAGLVEWPVVLMGTIADDFLSLPPEVLTASMKEHQKFFSVREKSGQIV 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D G I+ GN +V+ ARL DA FW+ D L Sbjct: 293 R-FVTVANRETADRGKTILAGNQKVLFARLSDAKFFWEND------------------LR 333 Query: 361 LSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 ++K Q A L L +V FH K+GT E V R+ L +++A L+ AD + A +K Sbjct: 334 VAKAGGQ--AWLAALGNVTFHNKLGTVAELVDRMAALSREVAPLVGADPDEAEAAARFAK 391 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +E+V EFP+LQG +G+ YA + + A +EH P GP ++VPT +S+ V+L Sbjct: 392 ADLSSEMVYEFPDLQGLMGRYYAAEAGLSDAVALAAQEHYSPLGPSDDVPTEPVSVAVAL 451 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 A+K+D L FWAI+EKP+GSKDP+ALRRA LG+IR++LEN++++ L + + Sbjct: 452 AEKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENELELNLKKML 501 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 2/172 (1%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +NL+ FFHDRLK+YL D I HD+I+A L P ND+LL +V+ K L F + G + Sbjct: 568 KNLLSFFHDRLKVYLKDEGISHDVIDASLAMPGNDDLLLLVNRAKALAAFLKTDDGVNLI 627 Query: 591 LSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL+ E+K E S ++ + EK L+ + I +M + + Sbjct: 628 QGFKRANNILSQAEDKDGVEYSFGAEAKFADADEEKALFTALDAADAKIAPAMAAEDFGA 687 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + PI+ FF+ V +N D +R NRL+LL I+ I L V +++K+ Sbjct: 688 AMSAMADLRAPIDAFFNTVQINADSAVLRRNRLNLLHRIRTICLSVADLRKL 739 >gi|254441837|ref|ZP_05055330.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 307] gi|198251915|gb|EDY76230.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 307] Length = 752 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/527 (43%), Positives = 317/527 (60%), Gaps = 30/527 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAA DL ++ L + G+ Y + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQAKAAADLQKLVTNGLVDAGLTYAGAGAFCTPRRLALSVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P SP+ EER GP+VGA AIDGF R G+ D +D KG+V+ AV++KP R Sbjct: 61 PESPDTREERKGPKVGAPDGAIDGFCRGAGVS--RDTLEVRDTGKGEVHFAVIQKPGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ AI+ PWPKSMRW T + W+RPL SI+CIL E ++ + + Sbjct: 119 ADIIADVLEGAIRSFPWPKSMRWGT-----GSLKWVRPLHSIICILTDEGGA-NVVAMSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V S + Y L+ A V+L + R + I ++A A A G Sbjct: 173 DGIAAGNTTLGHRFMAPDKIPVTSFNDYEARLKRAKVILRADERADLIWSEASNQAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V MG+ +L LP E++ ++K +QK F R + G + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLMGTIANDFLNLPPEVLTASMKEHQKFFSVRDKSGQIV 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +DGG I+ GN +V+ ARL DA FW+ D L Sbjct: 293 R-FVTVANRETADGGKTILAGNQKVLFARLSDAKFFWEND------------------LR 333 Query: 361 LSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 ++K +A LD L +V FH K+GT E V R+ L ++IA L+ AD + A +K Sbjct: 334 IAKT--GGLAWLDALGNVTFHNKLGTVAELVDRMAALSREIAPLVGADPDEAEAAARFAK 391 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +E+V EFP+LQG +G+ YA + + A +EH P GP ++VPT +SI V+L Sbjct: 392 ADLSSEMVYEFPDLQGLMGRYYAGEAGLSDAVALAAQEHYSPLGPSDDVPTAPVSIAVAL 451 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 A+K+D L FWAI+EKP+GSKDP+ALRRA LG+IR+ILE K + L+ Sbjct: 452 AEKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRVILETKRSLNLT 498 Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 2/171 (1%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FFHDRLK+YL D + HD+I+A L P ND+LL +V+ K L F + G + Sbjct: 580 DLLAFFHDRLKVYLKDEGVSHDVIDASLAMPRNDDLLLLVNRAKALAAFLKTDDGVNLIQ 639 Query: 592 SAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR IL+ E+K E S ++ +AEK L+A + I +M + + Sbjct: 640 GFKRANNILSQAEDKDGVEYSYGADIKFADGDAEKALFAALDAADAKIAPAMAAEDFASA 699 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + PI+ FFD V +N D +R NRL+LL I+ I L V +++K+ Sbjct: 700 MSAMADLRGPIDAFFDTVQINADSELLRRNRLNLLHRIRTICLSVADLRKL 750 >gi|260753970|ref|YP_003226863.1| glycyl-tRNA synthetase subunit beta [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553333|gb|ACV76279.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 682 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 249/701 (35%), Positives = 381/701 (54%), Gaps = 49/701 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPA +Q A E L+ +L LKE G+ + +Y TP R+ L ++ L Sbjct: 1 MADFLLELRSEEIPAGLQKMAVEKLAELLSSTLKEAGINPTKIEKYATPRRIALLMRDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPR A +KA+ GFLRSTGL T + ++++ PK G+ Y A + KP + + Sbjct: 61 AKTEAVQEERRGPRADAPEKALAGFLRSTGL-TKEELELRETPK-GNFYYAHIEKPGQTL 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +L +P I+ PWPKSMRW + + W+RPLK I+ ++ E++I ++L Sbjct: 119 IALLGEAIPAIIKTFPWPKSMRWGNFSASSESLRWVRPLKGIVALI-----DEQLIPIEL 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GH FH P + + Y + A V++D + R I ++A + A G Sbjct: 174 DGITSGTETKGHPFHHPDIVTLAKASDYPEKMAAAHVMIDFDARVQKITDEARKAAQKAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L+ED L +E GL EW +G FD+ YL +P E+I+LT++TNQK F R LA Sbjct: 234 LTLIEDAALAQENAGLTEWPVPLLGRFDEAYLAVPREVIQLTMRTNQKYFACTDRNQDLA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V++++A DGG I QGN +V++ARL DA FW++ D Sbjct: 294 AVFICVADMEAQDGGKEITQGNEKVLSARLADARFFWEQ--------------------D 333 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L PL+ + RLD V+F+ +G+ G++ RI L IA I AD +RA +L+KA Sbjct: 334 LKIPLEDWLPRLD--SVLFYEGMGSVGDKAKRIAHLSGYIADQIGADRKQAERAGLLAKA 391 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA NE A+ G + ++ VSLA Sbjct: 392 DLASNMVGEFPELQGVMGGYYAKAGNEAPDVVSAVS------GQYQAEAGAGVAAAVSLA 445 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QN 533 D++D+L F+ N +P+GSKDP+ALRRA + II+ I+ +++ +PL+ E ++ Sbjct: 446 DRIDSLACFFVRNIRPTGSKDPFALRRAAVQIIQTIIAHQLRLPLTPLFEKAGAGDQIES 505 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ F +RLK+ + IR+DLI+A+L D+++ ++ ++ L F S G L Sbjct: 506 LLAFITERLKVQQREAGIRYDLIDAVLALGYEDDVIRLLARVQALQSFIESEDGSDLLAG 565 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 +R IL E + +IS E Q E+ L + +++++ + Y Sbjct: 566 YRRAVNILKGSEASEKGDISQEDIEQ-----PEQDLQKALQAIEAPLEQALKAEDYAAAM 620 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 L S+ +PI+ FFD+V+VN D +R RL+LL+ I+ + Sbjct: 621 TALASLRQPIDQFFDKVIVNHDKAGIRSRRLALLEQIRTAM 661 >gi|56552340|ref|YP_163179.1| glycyl-tRNA synthetase subunit beta [Zymomonas mobilis subsp. mobilis ZM4] gi|241761604|ref|ZP_04759691.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543914|gb|AAV90068.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ZM4] gi|241373912|gb|EER63445.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 682 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 249/701 (35%), Positives = 381/701 (54%), Gaps = 49/701 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPA +Q A E L+ +L LKE G+ + +Y TP R+ L ++ L Sbjct: 1 MADFLLELRSEEIPAGLQKMAVEKLAELLSAKLKEAGINPTKIEKYATPRRIALLMRDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPR A +KA+ GFLRSTGL T + ++++ PK G+ Y A + KP + + Sbjct: 61 AKTEAVQEERRGPRADAPEKALAGFLRSTGL-TKEELELRETPK-GNFYYAHIEKPGQTL 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +L +P I+ PWPKSMRW + + W+RPLK I+ ++ E++I ++L Sbjct: 119 IALLGEAIPAIIKTFPWPKSMRWGNFSASSESLRWVRPLKGIVALI-----DEQLIPIEL 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GH FH P + + Y + A V++D + R I ++A + A G Sbjct: 174 DGITSGTETKGHPFHHPDVVTLAKASDYPEKMAAAHVMIDFDARVQKITDEARKAAQKAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L+ED L +E GL EW +G FD+ YL +P E+I+LT++TNQK F R LA Sbjct: 234 LTLIEDAALAQENAGLTEWPVPLLGRFDEAYLAVPREVIQLTMRTNQKYFACTDRNQDLA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V++++A DGG I QGN +V++ARL DA FW++ D Sbjct: 294 AVFICVADMEAQDGGKEITQGNEKVLSARLADARFFWEQ--------------------D 333 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L PL+ + RLD V+F+ +G+ G++ RI L IA I AD +RA +L+KA Sbjct: 334 LKIPLEDWLPRLD--SVLFYEGMGSVGDKAKRIAHLSGYIADQIGADRKQAERAGLLAKA 391 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA NE A+ G + ++ VSLA Sbjct: 392 DLASNMVGEFPELQGVMGGYYAKAGNEAPDVVSAVS------GQYQAEAGAGVAAAVSLA 445 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QN 533 D++D+L F+ N +P+GSKDP+ALRRA + II+ I+ +++ +PL+ E ++ Sbjct: 446 DRIDSLACFFVRNIRPTGSKDPFALRRAAVQIIQTIIAHQLRLPLTPLFEKAGAGDQIES 505 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ F +RLK+ + IR+DLI+A+L D+++ ++ ++ L F S G L Sbjct: 506 LLAFITERLKVQQREAGIRYDLIDAVLALGYEDDVIRLLARVQALQSFIESEDGSDLLAG 565 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 +R IL E + +IS E Q E+ L + +++++ + Y Sbjct: 566 YRRAVNILKGSEASEKGDISQEDIEQ-----PEQDLQKALQAIEAPLEQALKAEDYAAAM 620 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 L S+ +PI+ FFD+V+VN D +R RL+LL+ I+ + Sbjct: 621 TALASLRQPIDQFFDKVIVNHDKAGIRSRRLALLEQIRTAM 661 >gi|114766654|ref|ZP_01445595.1| glycyl-tRNA synthetase beta subunit [Pelagibaca bermudensis HTCC2601] gi|114541117|gb|EAU44171.1| glycyl-tRNA synthetase beta subunit [Roseovarius sp. HTCC2601] Length = 741 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 227/534 (42%), Positives = 318/534 (59%), Gaps = 26/534 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL ++ L E G+ Y + TP RL L + GL Sbjct: 1 MPDLLIELFSEEIPARMQTRAAEDLKKLVTDGLVENGLTYAGAAAFSTPRRLTLTVSGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+V A +KAI+GFLR G+ + C+ ++D KKG AV+ KP R Sbjct: 61 DASPATREERRGPKVDAPEKAIEGFLRGAGV-SREQCEARED-KKGTFLYAVIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ AI+ PWPKSMRW W+RPL I+C+L +E A + ++ L++ Sbjct: 119 AEIVAEVLEAAIRNFPWPKSMRWGA-----GTLRWVRPLHRIMCVLSSE-AGDAVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF +V S Y L+ A V+L E R I +DA A A G Sbjct: 173 DGIEAGQTTEGHRFMGDGAFEVTSFADYETRLKRAKVILSAEERAETIWHDATNRAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG D ++L LP E+++ ++K +QK F + Sbjct: 233 LEVVEDRGLLAEVAGLVEWPVVLMGKIDAQFLELPPEVLQTSMKEHQKFFSVKNPATSRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ D GA I+ GN++V++ARL DA FW+ D N Sbjct: 293 EGFVTVANVETPDDGATILAGNNKVLSARLSDAKFFWENDLRVAKN-------------- 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L+ RL +V FH K+G+Q +R+ RI L ++IA ++ AD AL ++A ++KA Sbjct: 339 --EGLEAWTERLG--NVTFHNKLGSQRDRIERIAALAREIAPMVGADAALAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A EEH P GP + VPT +S+TV+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPTEVAVACEEHYSPLGPSDAVPTAPVSVTVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + + Q L Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLVNGLRLHLDRLFDAQIL 508 Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 2/171 (1%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FFHDRLK++L +RHD+I+A+L P ND+L +V L E + G + Sbjct: 569 DLLAFFHDRLKVHLKGEGVRHDVIDAVLAMPGNDDLAQVVRRATALGEVLGTEDGANLVQ 628 Query: 592 SAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR IL E+K E S P++ ++ EK L+A + I+ +++ + + Sbjct: 629 GFKRANNILTQAEDKDGVEYSFGADPKFAEVDEEKALFAALDAADAEIKPALEKEDFAAA 688 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + PI+ FF+ V VN + VR NRL+LL I+ L V ++ ++ Sbjct: 689 MTAMAGLRAPIDAFFEAVQVNSESPVVRRNRLNLLSRIRTSCLQVADLNRL 739 >gi|307292913|ref|ZP_07572759.1| glycyl-tRNA synthetase, beta subunit [Sphingobium chlorophenolicum L-1] gi|306880979|gb|EFN12195.1| glycyl-tRNA synthetase, beta subunit [Sphingobium chlorophenolicum L-1] Length = 736 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 267/772 (34%), Positives = 394/772 (51%), Gaps = 107/772 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ KA+EDL+ + L + G+ +++ + TP RL L + L Sbjct: 1 MTDFLLELRCEEIPARMQLKASEDLARLFTEELAKSGLKPESIDSFVTPRRLALIARNLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL Q + + + G V+ A + KP R Sbjct: 61 LETAAVSEEHKGPRTSAPAQALEGFLRKTGL-----TQDQLEDRDG-VWFATVNKPGRAS 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +P I+ PWPKSMRW + W+RPL+ I+ IL E+++D+++ Sbjct: 115 AEVLAEAIPTVIRAFPWPKSMRWGRASQTTESLRWVRPLQGIVAIL-----GEELVDIEI 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T GHRFH P I + Y L V+ + R++ I A A+A G Sbjct: 170 EGIRSGYATLGHRFHHPGEITIGGAHDYAEKLRACHVIASHQERQSIIEAKAAEAAAAHG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++EDK L+ E GL EW +G FD +L +P E+I+LT++ NQK FV R G LA Sbjct: 230 YTVIEDKGLVTENAGLTEWPVPLLGDFDPAFLEVPPEVIQLTLRINQKYFVLRDTSGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI+A DGGAAIV GN +V+AARL DA FW++D+ + L++ A K Sbjct: 290 PAFICTANIEAKDGGAAIVAGNRKVLAARLSDARFFWEQDRK-----TKLEDHAKKLE-- 342 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV------------ 408 + FH K+GT ++V R+ L + L++ D+ Sbjct: 343 ---------------RITFHEKLGTVADKVERVAKLAR---WLVEEDIIPPLPQAGGAGG 384 Query: 409 ---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 L ++A L+KADL TE+V EFPELQG +G YA + + DAI +H KP G Sbjct: 385 GLADLAEQAARLAKADLVTEMVGEFPELQGIMGGYYARAEGLPDAVADAIRDHYKPVGQG 444 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN----KI 521 ++VPT +++ VSLADKLDT+++F+AI+EKP+GSKDP+ALRRA LG+I ++L+N K+ Sbjct: 445 DDVPTAPLTVAVSLADKLDTIVSFFAIDEKPTGSKDPFALRRAALGVISLLLDNRLRTKL 504 Query: 522 DIPLSQFIED----------------------------QNLIL-FFHDRLKLYLHDRDIR 552 +PLS+ +E Q ++L FF DRLK+ + +R Sbjct: 505 ALPLSKAVEAVEITEFLGALSAAAEQFKGEPFALSNILQPIVLDFFADRLKVQQKEAGVR 564 Query: 553 HDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 HDLI+A+ D+L+ ++ +K L F ++ G L KR IL E ++ Sbjct: 565 HDLIDAVFALGGEDDLVRLLARVKALQSFVATDDGTNLLAGYKRAANILKKEGIESPSAP 624 Query: 612 LEISPQYLLLEAEKRLYAVISDFG--THIQE-------------------SMDHKRYHQI 650 + Q L + G T+ E S+ + + Sbjct: 625 AKAGAQSGAAHPNSELPPS-QEHGSLTYTPEPAEAALIAALDAAEPRATASVAAEDFEAA 683 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ PI+ FF+ V VN D R RLSLL ++ + V + KI Sbjct: 684 MAALATLRAPIDAFFETVTVNDADEAKRSARLSLLARVRKAVHAVADFSKIT 735 >gi|260575527|ref|ZP_05843525.1| glycyl-tRNA synthetase, beta subunit [Rhodobacter sp. SW2] gi|259022170|gb|EEW25468.1| glycyl-tRNA synthetase, beta subunit [Rhodobacter sp. SW2] Length = 746 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 223/560 (39%), Positives = 327/560 (58%), Gaps = 32/560 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL ++ L E G+ Y + TP RL L L+GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARAAADLKKLVTDGLVEAGLTYAGAGAFSTPRRLVLSLEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLRKPKRL 119 HS EER GP A + A+ GFLRSTGL + Q++ +D KKG V+ AV+ KP R Sbjct: 61 AHSQALREERKGPAATAPEAALQGFLRSTGL---AREQLELRDDKKGQVWFAVIEKPGRA 117 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 ++ ++ I+ PWPKSMRW T + W+RPL SILC+L E + ++ L Sbjct: 118 AAAIVAEVLEATIRNFPWPKSMRWGT-----GSLRWVRPLHSILCLLTDEHGPQ-VVPLS 171 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + + G T GHRF +P V D Y L+ A V+LDP R I +DA A A Sbjct: 172 VDHLNAGATTEGHRFMSPGRFAVTGFDDYAAKLKRAHVILDPAAREAQIWHDATTQAFAR 231 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 GLE+V D LL E+ GLVEW V +G+ +L LP E+++ +++T+QK F + + Sbjct: 232 GLEVVPDAGLLAEVAGLVEWPVVLLGAIAPGFLDLPPEVLQTSMRTHQKFFSVKNPKTGR 291 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 F+ V+N + +D GA I+ GN++V++ARL DA FW +N+L + ++ + L Sbjct: 292 IEGFVTVANRETADHGATILAGNNKVLSARLSDAKFFW---ENDLRTVHAVGMEGMAAGL 348 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 V FH K+G+Q +RV+RI L ++IA L+ A L A + K Sbjct: 349 ---------------AHVTFHNKLGSQADRVARIEALAREIAPLVGAAPDLAAEAARICK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA + +A E H KP G ++VPT+ +S+ V+L Sbjct: 394 ADLQSAMVAEFPELQGLMGRYYATAAGHDDGVPEACEMHWKPLGAADDVPTDPVSVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + L + + FH Sbjct: 454 ADKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLGNGVRASLIKAMNTGEKGHIFH 513 Query: 540 DRLKLYLHDRDIRHDLIEAI 559 ++ + +R+ + D+++A+ Sbjct: 514 ---RVAVKERE-KQDVLDAL 529 Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 4/192 (2%) Query: 514 RIILENKIDIPLSQFIEDQ--NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTI 570 R+++ D + Q +L+ FFHDRLK++L D+ IRHD+I+A L P ND+L + Sbjct: 553 RVLVSGSFDDGTALHASTQVLDLLAFFHDRLKVFLKDQGIRHDVIDACLAMPGNDDLTLL 612 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYA 629 V + L F + G L KR +L+ E K+ E S P++ + E+ L+ Sbjct: 613 VKRAQSLAAFLKTEDGPNLLQGFKRANALLSQAEAKDGVEYSYGADPKFAETDEERALFT 672 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + +M + + + ++ P++ FF+ V VN D+ R NRL+LL I+ Sbjct: 673 ALDQAEAVLTPAMKTEDFAAAMAAMATLRAPVDAFFEAVQVNSDNPITRRNRLNLLHRIR 732 Query: 690 NIILIVINVQKI 701 ++ V ++ KI Sbjct: 733 SLCAQVADLTKI 744 >gi|163746094|ref|ZP_02153453.1| glycyl-tRNA synthetase subunit beta [Oceanibulbus indolifex HEL-45] gi|161380839|gb|EDQ05249.1| glycyl-tRNA synthetase subunit beta [Oceanibulbus indolifex HEL-45] Length = 768 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 217/523 (41%), Positives = 311/523 (59%), Gaps = 25/523 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 +PD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L L + Sbjct: 14 VPDLLIELFSEEIPARMQKRAGEDLQKLVTNGLVEAGLTYGSAAVFTTPRRLTLALGDML 73 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP ++EER GP+ A +KAI+GFLR GL D ++D KG V+ A + KP R Sbjct: 74 AASPRQVEERKGPKADAPEKAIEGFLRGAGL--TRDQLEERDTPKGKVFFAKIEKPGRPA 131 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL SILCI + ++A +++ L + Sbjct: 132 AEIVAEVLEQTIRNFPWPKSMRWGT-----GSLKWVRPLHSILCI-INDEAGAEVVPLTV 185 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I+V + Y L A V+LDP R + I NDA +A A G Sbjct: 186 DGITAGNTTRGHRFLAPGEIEVAGFEDYQTKLARASVVLDPAARADTIWNDATNMAFAAG 245 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVE+ V MG + +L LP E+++ ++K +QK F R + Sbjct: 246 LEVVEDAGLLAEVAGLVEYPVVLMGRIGEDFLGLPPEVLQTSMKEHQKFFSVRNPKSGQI 305 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V+ ARL DA FW D + + Sbjct: 306 ERFVTVANRTTADDGATILAGNEKVLGARLSDAKFFWDNDLRTVTAEGGMAT-------- 357 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 K L+ +V FH K+GTQ E + R+ L +++A L+ AD ++A ++KA Sbjct: 358 WVKALE---------NVTFHNKLGTQAELIDRMATLSRELAPLVGADADEAEQAARVAKA 408 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA + + DA ++H P GP ++VPT +SI V+LA Sbjct: 409 DLSSEMVYEFPELQGLMGSYYARKAGLSDAVADAAKDHYAPLGPSDDVPTAPVSIAVALA 468 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + + Sbjct: 469 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDVSL 511 Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 2/175 (1%) Query: 529 IEDQNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + +L+ F HDRLK+YL D+ IRHD+I+A I +D+L +V + L+E + GE Sbjct: 592 FKSSDLLSFIHDRLKVYLRDQGIRHDIIDACIAMDGSDDLTLLVKRARALSETLKTDDGE 651 Query: 588 KFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KR IL+ EE E S P++ EAEK L+A + I +M + Sbjct: 652 NLIQGFKRANNILSQAEEADGVEYSFGADPKFAETEAEKDLFAALDKAEAKITPAMAAQD 711 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + PI+ FF+ V VN ++ VR NRL+LL I+ I V ++ K+ Sbjct: 712 FSTAMAAMAELRGPIDAFFEAVQVNANNPTVRRNRLNLLSRIRTICSAVADLTKL 766 >gi|296284056|ref|ZP_06862054.1| glycyl-tRNA synthetase, beta subunit [Citromicrobium bathyomarinum JL354] Length = 734 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 258/762 (33%), Positives = 382/762 (50%), Gaps = 98/762 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ SEEIPARMQ A +L + + GV + + TP RL L +GL Sbjct: 6 DFLLEMRSEEIPARMQAGARAELEKLFRREMDAAGVSMGEVTVWSTPRRLALIARGLPTE 65 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLRKPKRLIE 121 + EE GP VGA +A+DGF R ++ Q++ +D K + Y AV+ P R + Sbjct: 66 TQAVSEEAKGPPVGAPDQAVDGFCRK---NNVTRDQLEVRDVKGRETYFAVIDTPGRAVR 122 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 DVL +P I+ WPKSMRW + W+RPL I+ +L +++++ ++ Sbjct: 123 DVLAEAIPAIIRDFAWPKSMRWGAASISTESMRWVRPLSGIVALL-----GDEVVECEVH 177 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 + G +T GHRFH I + D Y L A V++D + R I A R+AS GL Sbjct: 178 GVTSGAVTLGHRFHHSGDITIGDADDYAVKLRAAHVIVDHQERAALIREGAARVASEAGL 237 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 LVED+ L+ E GL EW +G F++ +L +P E I+LT + NQK FV +G LAN Sbjct: 238 SLVEDEGLVVENAGLTEWPIPLLGRFEEDFLSVPPETIQLTARVNQKYFVCEDAQGTLAN 297 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI +NI+A+DGGAAIV GN +V+AARL DA FW+ DQ Sbjct: 298 AFICTANIEAADGGAAIVDGNRKVLAARLSDARFFWEVDQK------------------- 338 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA------------ 409 K L Q L + FH K+GT ++V R+ L + L+++D+ Sbjct: 339 -KTLAQHAEGLKR--ITFHEKLGTVADKVERVAKLAR---WLVESDIVTPASAGVTKEEL 392 Query: 410 --LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + A L KADL TE+V EFPELQG +G YA + + DAI +H KP G + Sbjct: 393 AQMAEDAAKLCKADLVTEMVGEFPELQGLMGGYYAGAEGLPDAVADAIRDHYKPVGQGDE 452 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI------ 521 VPT +++ VSLADKLDTL F+ I E P+GSKDP+ALRRA GI+ + +EN + Sbjct: 453 VPTAPVTVAVSLADKLDTLFAFFMIQEYPTGSKDPFALRRAANGILSLTVENGLRFGIWG 512 Query: 522 ---------DIPLSQFIEDQNLI-LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + P + + +NL+ F DRLK+ + +RHDLI+A+ R ++DN + ++ Sbjct: 513 WSTFLKENSNYPEAAGVHPRNLLHQFLQDRLKVQQREAGVRHDLIDAV-RSDDDN-VRLL 570 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE---------------------- 609 + L F + G+ L KR IL E+ + + Sbjct: 571 ARVHALQSFMETEDGKNLLAGYKRAANILKKEDWQGVDDAPHTGEEDPLVMVDDPDMKDV 630 Query: 610 ISLEISPQ----------YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 ++ +++ + Y AEK L + G ++ +R+ L S+ Sbjct: 631 VAAQMAEKSAHPSGKSLSYTPEPAEKALMDALDTAGPQAATAVREERFADAMSALASLRA 690 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN +++ R RL LL ++ + V + KI Sbjct: 691 PIDDFFENVTVNDENKTKRSVRLGLLARFRDAVHQVADFGKI 732 >gi|85374000|ref|YP_458062.1| glycyl-tRNA synthetase beta subunit [Erythrobacter litoralis HTCC2594] gi|84787083|gb|ABC63265.1| glycyl-tRNA synthetase beta subunit [Erythrobacter litoralis HTCC2594] Length = 742 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 260/751 (34%), Positives = 387/751 (51%), Gaps = 61/751 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLE+ SEEIPARMQ A ++L + + GV + + TP RL L + L Sbjct: 1 MPDFLLELRSEEIPARMQAGARDELEKLFRREMDAAGVEAGELTVWSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP GA +AIDGF R G+ T +I+ D K + Y AV+ KP R + Sbjct: 61 EATQAVREEAKGPPEGAPDQAIDGFCRKNGV-TRDQLEIR-DVKGRNTYFAVIEKPGRAV 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D+L +P I+ WPKSMRW T + W+RPL I+ +L + +++ ++ Sbjct: 119 KDLLAEAIPAIIRDFSWPKSMRWGTASMSTESLRWVRPLSGIVALL-----GDDVVECEV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G +T GHRFH I + + D Y L V++D E R++ I A ++A+ G Sbjct: 174 HGVTSGAVTLGHRFHHSGDITIGNADDYAMKLRAGHVIVDHEQRQDLIREGAAKVAAEAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV---TRTREG 297 L+LVED+ L+ E GL EW +G F++ +L +P E I+LT + NQK FV + G Sbjct: 234 LKLVEDEGLVIENAGLTEWPVPLLGRFEEDFLQVPPETIQLTARVNQKYFVCHRSPAEAG 293 Query: 298 V------------------LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 V LAN FI +NI+A DGGA +V GN +V+AARL DA FW Sbjct: 294 VSDDGGQPHEVPASAGTQQLANAFICTANIEAEDGGARVVDGNRKVLAARLADARFFWDV 353 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLD--QRMARLDML----DVVFHAKIGTQGERVSRI 393 D+ + + F+ L D +R+A L D+V AK GT + ++ Sbjct: 354 DRKKTLAEHAKGLERITFHEKLGTVADKVERVANLARWLVESDIVVPAKAGTSLGQSAKT 413 Query: 394 RVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD 453 + + L ++A L+KADL TE+V EFPELQG +G YA + D Sbjct: 414 NEIPASAGMTKEELADLTEQAARLAKADLVTEMVGEFPELQGLMGGYYARAEGLPDEVAD 473 Query: 454 AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 AI +H KP G + VPT +++ VSLADKLDTL +F++I+EKP+GSKDP+ALRRA LG+I Sbjct: 474 AIRDHYKPVGQGDEVPTAPVTVAVSLADKLDTLRSFFSIDEKPTGSKDPFALRRAALGVI 533 Query: 514 RIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVD 572 R++ EN + + Q L+ FF DRLK+ + +RHDLI+A+ D+L+ ++ Sbjct: 534 RLMTENGLRMSAGQ----GELLEFFADRLKVQQREAGVRHDLIDAVFALGGEDDLVRLLA 589 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILA-------------------IEEKKNREI--- 610 + L F + G L KR IL +++ REI Sbjct: 590 RVHALQAFVQTEDGTNLLAGYKRAANILKKEQWDAEPEHTGDEDPLENVDDPDMREIYAE 649 Query: 611 SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 ++E Y AEK L + +++ + + L S+ PI+ FF++V+V Sbjct: 650 AVEKKLSYTPEPAEKALIDALDSAEPKAVATVETEDFAAAMSALASLRAPIDAFFEEVIV 709 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 N +++ VR RL LL ++ + V + +I Sbjct: 710 NAEEKHVRAARLDLLARFRDAVHRVADFSRI 740 >gi|254418766|ref|ZP_05032490.1| glycyl-tRNA synthetase, beta subunit [Brevundimonas sp. BAL3] gi|196184943|gb|EDX79919.1| glycyl-tRNA synthetase, beta subunit [Brevundimonas sp. BAL3] Length = 790 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 229/548 (41%), Positives = 318/548 (58%), Gaps = 43/548 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLEI+SEEIPARMQ AA DL ++ LK G+ + + Y P RL L + GL Sbjct: 1 MPQLLLEIFSEEIPARMQQGAARDLERMVSDRLKAAGLTWDALTTYAGPRRLTLVIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +P++ EE GPR A ++A++GFLR TGL D ++D V AVL R Sbjct: 61 AATPDREEEVKGPRASAPEQALEGFLRKTGL--TRDQLTERD----GVLFAVLSSKGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ V I+ PWPKSMRW + W+RP+K ILC+ K++ ++ Sbjct: 115 TDLVAETVDQVIRTFPWPKSMRWGS-----GTLRWVRPIKRILCLF-----DGKVVPFEI 164 Query: 181 KEIPCGNITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 IP IT GHRF + +KV Y LE+ VLLD R+ IL+ A +A Sbjct: 165 DGIPSDAITEGHRFLGSGQLLKVSDFVDYRTQLEQNFVLLDVADRKLRILDQAKAACAAK 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR--TREG 297 GL LV+D LL+E+ GL EW +G D ++L LP E++RL++K +QK F R +++G Sbjct: 225 GLVLVDDDGLLDEVAGLAEWPTPILGDMDPQFLALPPEVVRLSMKVHQKYFAVRDPSKDG 284 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 LA F++V+N++A+DGG A+ GNSRV++ARL DA FW DQ K + Sbjct: 285 -LAPNFLVVANVEATDGGKALAAGNSRVLSARLNDARFFWDEDQ---------KVGFDAW 334 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N LS V FHAK+G+ +RV RI L ++IA L+ AD + A L Sbjct: 335 NAKLSG-------------VTFHAKLGSLADRVERIAALAREIAPLVGADPDEAETAARL 381 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SKADL + +V EFPELQG +G YA L + + DA+ +H KP+GP + VPT +++ V Sbjct: 382 SKADLLSGMVSEFPELQGVMGGYYARLAGNSDAVADAVRDHYKPQGPADTVPTAPVTVAV 441 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-QNLIL 536 +LADKLDTL+ F+AI+EKP+GSKDP+ALRRA LG+IR++LEN + L + N +L Sbjct: 442 ALADKLDTLVGFFAIDEKPTGSKDPFALRRAALGVIRLVLENGVRASLGALLAAFVNSVL 501 Query: 537 FFHDRLKL 544 H+ KL Sbjct: 502 RAHEMHKL 509 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 13/192 (6%) Query: 519 NKIDIPLSQFIED--QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 D+ L +++ +L+ FF DRL + L D+ RHDL+ A+ +D+L+ IV ++ Sbjct: 603 TGFDLELQAWVQGLVGDLVAFFADRLTVLLRDQGQRHDLVAAVFALGDDDLVRIVRRVEA 662 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR------EISLEISPQYLLLEAEKRLYAV 630 L F ++ G L KR IL EEKK + L P E E L Sbjct: 663 LAAFLATDDGANLLAGYKRASNILRAEEKKGPVPTGMVQTGLPNQP-----EPETVLAFA 717 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + T ++ +++ + + L + P++ FF+ VLVN D RDNRL LL +++ Sbjct: 718 VGAARTAVEAALETEDFAAAMTALARLRAPVDRFFEDVLVNSDVPAERDNRLKLLGQVRD 777 Query: 691 IILIVINVQKIV 702 ++ V + +I Sbjct: 778 VMGQVADFGQIA 789 >gi|94498278|ref|ZP_01304838.1| Glycine--tRNA ligase [Sphingomonas sp. SKA58] gi|94422280|gb|EAT07321.1| Glycine--tRNA ligase [Sphingomonas sp. SKA58] Length = 772 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 268/783 (34%), Positives = 396/783 (50%), Gaps = 93/783 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ KA++DL+ + L + G+ + + TP RL L + L Sbjct: 1 MTDFLLELRCEEIPARMQVKASDDLARLFADELAKAGLKPSAIDSFVTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A+DGFLR TGL Q + + + G V+ AV+ KP R Sbjct: 61 LETAAVSEEFKGPRTSAPAQALDGFLRKTGL-----TQDQLEERDG-VWFAVVNKPGRAA 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL VP I+ PWPKSMRW + W+RPLK I+ IL E+++D+++ Sbjct: 115 ADVLAQAVPAVIRAFPWPKSMRWGAASQTTESLRWVRPLKGIVTIL-----GEQLVDIEM 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + + G T GHRFH P I + Y+ L V+ + R+ I A A+A G Sbjct: 170 EGLRSGYATLGHRFHHPGEITIGGAHDYLEKLRACHVIASHQERQAIIAAKADEAAAAHG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++EDK L+ E GL EW +G FD +L +P E+I+LT++ NQK FV R +G LA Sbjct: 230 YSVIEDKGLVAENAGLTEWPVPLLGDFDPAFLEVPPEVIQLTLRINQKYFVLRDTDGNLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI A DGGAAI+ GN +V+AARL DA FW++D+ + K + F+ Sbjct: 290 PAFICTANIDAKDGGAAIIAGNRKVLAARLSDARFFWEQDRKTSLADHAKKLERITFHEK 349 Query: 361 LSKPLD--QRMARL-------DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-L 410 L D +R+A+L ++ AK G QG+ L + + A++A L Sbjct: 350 LGTVADKVERVAKLARWLVEEGIVGASAPAKAGAQGDEAQPNSGL-LPLQEHCGAELATL 408 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++A L KADL TE+V EFPELQG +G YA ++ + DAI +H KP G ++VPT Sbjct: 409 AEQAARLCKADLVTEMVGEFPELQGVMGGYYARAEDLPDAVADAIRDHYKPVGQGDDVPT 468 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP------ 524 +++ VSLADKLDT+ +F+ I+EKP+GSKDP+ALRRA LGII+++++N + + Sbjct: 469 APVTVAVSLADKLDTITSFFGIDEKPTGSKDPFALRRAALGIIQLVIKNDLRLRLLDLII 528 Query: 525 ----------LSQFIEDQN---------------------------LILFFHDRLKLYLH 547 +F+ + N L+ FF DRLK+ Sbjct: 529 YVSRGNEGDFTQRFVFEDNFRDWLKAGGEGDLAAVNGILLRGNGLALLDFFADRLKVQQK 588 Query: 548 DRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL---AIE 603 + +RHDLI+A+ D+L+ ++ +K L F ++ G L KR IL A + Sbjct: 589 EAGVRHDLIDAVFAIGGEDDLVRLLARVKALQSFVATDDGANLLAGYKRAANILKKDAPD 648 Query: 604 EKKNREISLEISPQ------------------------YLLLEAEKRLYAVISDFGTHIQ 639 R LE + Y AE L + Sbjct: 649 LSSARHPGLEPGSRFFDDAEGSGTPDQVRGDDAADALSYTPEPAEADLITALDAAEPRAA 708 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ +R+ L ++ PI+ FFD V VN D + R +RL+LL +++ + V + Sbjct: 709 QAVAEERFEDAMAALATLRAPIDAFFDSVTVNDPDPDKRASRLALLARVRDAVHNVADFS 768 Query: 700 KIV 702 KI Sbjct: 769 KIA 771 >gi|146276696|ref|YP_001166855.1| glycine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025] gi|145554937|gb|ABP69550.1| Glycine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025] Length = 758 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 223/561 (39%), Positives = 328/561 (58%), Gaps = 31/561 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + ++D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDQLETRED-KKGAVLFAVVEKPGRRA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW T + W+RPL SILC+L +++A +++ + + Sbjct: 119 PDIVAEVLERTIRTFPWPKSMRWGT-----GSLRWVRPLHSILCLL-SDEAGSQVVPVTV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 ++ N T GHRF AP V D Y L+ A+V+LD R AI ++A A A G Sbjct: 173 DQVTAVNTTEGHRFMAPGRFAVTGFDDYRAKLQRALVMLDAAEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG +++L LP E+++ +++ +QK F R Sbjct: 233 LEVVPDAGLLAEVAGLVEWPVVLMGPIGEEFLGLPPEVLQTSMREHQKFFSVRNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I++GN++V++ARL DA FW+ D+ + + +A Sbjct: 293 EKFVTVANRETADHGATILKGNAKVLSARLSDASFFWENDRRTVQTVGLEGMAA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + V FH K+G+Q +R++RI L ++IA L+ A L A ++KA Sbjct: 347 ------------GLAHVTFHNKLGSQADRIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA A + H +P GP + VPT+ +S+ V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGSYYARAAGLPEPVALACKAHYQPLGPSDAVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF--F 538 DK+DTL FWAI+EKP+GSKDP+ALRRA LG++R++L N + + L + + L F Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVVRLLLMNGLRLSLLNQVRFAHGCLAEQF 514 Query: 539 HDRLKLYLHDRDIRHDLIEAI 559 + R ++ IR + EA+ Sbjct: 515 NSRFNFFVQ---IREEPKEAV 532 >gi|294676756|ref|YP_003577371.1| glycyl-tRNA synthetase subunit beta [Rhodobacter capsulatus SB 1003] gi|294475576|gb|ADE84964.1| glycyl-tRNA synthetase, beta subunit [Rhodobacter capsulatus SB 1003] Length = 754 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 219/529 (41%), Positives = 314/529 (59%), Gaps = 26/529 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ A + L ++ L E G+ Y + + + TP RL L L GLS Sbjct: 1 MPELLIELFSEEIPARMQAMARDTLRKMVTDGLVEAGLTYGHAQAFSTPRRLVLVLDGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP A + A+ GFLRSTGL T+ + K+D KKG V+ AV+ KP R Sbjct: 61 TESPTLREERKGPATTAPEAALQGFLRSTGL-TLDQLE-KRDDKKGQVWFAVIEKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW W+RPL SILC+L ++D ++DLD+ Sbjct: 119 PEIVAEVLEKTIRSFPWPKSMRWGN-----GTLKWVRPLHSILCLL-SDDTGASVVDLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP V Y L+ A V+LD R I +DA +LA A G Sbjct: 173 DCIKAGATTAGHRFMAPDRFTVTGFADYAAKLKAAKVVLDSAEREAMIWHDATQLAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED+ LL E+ GLVE+ MG+ + +L LP E+++ +++ +QK F R+ + Sbjct: 233 LELVEDRGLLTEVAGLVEFPVALMGAIAEDFLHLPPEVLQTSMREHQKFFSVRSPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I++GN +V++ARL DA FW+ D L +K L Sbjct: 293 EGFVTVANRETADHGATILKGNLKVLSARLSDARFFWEHD------LRVVKTEGL----- 341 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + M + +V FH K+G+Q R+ RI L ++IA L+ AD ++A ++ K+ Sbjct: 342 ------EGMG-AGLANVTFHNKLGSQKARIDRIAALAREIAPLVKADPDQAEKAALVVKS 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA Q A + H P GP + VP+ +++ V+LA Sbjct: 395 DLRSAMVGEFPELQGLMGSYYARAQGLPEEIATACKGHYSPLGPSDAVPSEPVTVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + + L + I Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLGNGLRMGLERVI 503 Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 2/172 (1%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +L+ FFHDRLK++L D IRHD+I+A+L P ND+L +V + L+ F + G + Sbjct: 581 SDLLSFFHDRLKVFLKDEGIRHDVIDAVLAMPGNDDLTLVVKRAEALSAFLKTEDGTNLI 640 Query: 591 LSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL E K+ E S ++ ++AE+ L+A + + +M + + Sbjct: 641 QGFKRANNILTQAEAKDGVEYSFGADVKFAEVDAERALFAALDAAEAALAPAMQSEDFAT 700 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + PI+ FF V +N ++ VR NRL+LL I+ I V ++ K+ Sbjct: 701 AMAEMAKLRAPIDAFFTAVQINAENPIVRRNRLNLLSRIRQICQSVADLTKL 752 >gi|149184489|ref|ZP_01862807.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. SD-21] gi|148831809|gb|EDL50242.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. SD-21] Length = 736 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 260/770 (33%), Positives = 384/770 (49%), Gaps = 105/770 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SE+IPARMQ A +L + ++ GV + + TP RL L + L Sbjct: 1 MSDFLLELRSEDIPARMQTGARGELEKLFRREMEAAGVTTGEITVWSTPRRLALIARDL- 59 Query: 61 PHSPEKIEERL-GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 P + E + E L GP VGA +A+DGF R G+ S ++ K Y AV P R Sbjct: 60 PEATEAVSEELKGPPVGAPDQALDGFCRKAGVDKGS--LETREVKGRATYFAVKNIPGRA 117 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 +D+L +P I+ WPKSMRW + W+RPL I+ +L + +++ + Sbjct: 118 TKDLLAKAIPAIIRDFSWPKSMRWGAASISTESLRWVRPLSGIVALL-----GDDVVECE 172 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + + G +T GHRFH I + + D Y L V++D E R++ I + A ++A+ V Sbjct: 173 VHGVTSGAVTLGHRFHHSGDITIGNADDYAMKLRAGHVIVDHEERQDLIRSGAAKVATEV 232 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 GL+LVED+ L+ E GL EW +G F++ +L +P E I+LT + NQK FV G L Sbjct: 233 GLKLVEDEGLVIENAGLTEWPVPLLGRFEEDFLEVPPETIQLTARVNQKYFVCENEAGEL 292 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FI +NI+A DGGA +V GN +V+AARL DA FW N+ Sbjct: 293 ANAFICTANIEAEDGGARVVDGNRKVLAARLSDARFFW--------------------NV 332 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIV 416 D K L L+ + FH K+GT ++V R+ L + + + + DAD + ++A Sbjct: 333 DRKKTLAVHAKGLER--ITFHEKLGTVADKVDRVAKLARWLVEEGIVKDADPDMAEQAAR 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TE+V EFPELQG +G YA + + DAI +H KP G + VPT +++ Sbjct: 391 LAKADLVTEMVGEFPELQGLMGGYYARAEGLPDAVADAIRDHYKPVGQDDEVPTAPVTVA 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----------- 525 VSLADKLDTL++F+ I E+P+GSKDP+ALRRA LG I +IL+NK+ I + Sbjct: 451 VSLADKLDTLVSFFVIKERPTGSKDPFALRRAALGAIELILQNKLRIEIDYATAKAANRV 510 Query: 526 -----------SQFIEDQNLIL------FFHDRLKLYLHDRDIRHDLIEAI--LRPENDN 566 + F E N L FF DRLK+ D +RHDLI+A+ L D Sbjct: 511 FRQHENREDHDAWFTEQNNAELYRAVPDFFVDRLKVQQRDAGVRHDLIDAVFGLAERKDE 570 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE----------------------- 603 ++ + + L F + G L KR IL E Sbjct: 571 IVGNLARVHALQSFMDTEDGANLLAGYKRAANILKKEDWHGIEGEIARTGEEDPLALVDD 630 Query: 604 ------------EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 E+ +E+S P AE+ L ++ ++++ + + Sbjct: 631 PDMRAVVEAKMAERHAKELSYAPEP------AEQALMDALATSEPAAAKAIEAEDFSAAM 684 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ PI+ FFD+V VN ++ R +RL LL + + V + +I Sbjct: 685 AALAALRAPIDRFFDEVTVNAEEENKRAHRLDLLARFRAAVHKVADFSRI 734 >gi|85708600|ref|ZP_01039666.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. NAP1] gi|85690134|gb|EAQ30137.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. NAP1] Length = 683 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 255/720 (35%), Positives = 370/720 (51%), Gaps = 58/720 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ A ++L + ++ GV N+ + TP RL L + L Sbjct: 1 MADFLLELRCEEIPARMQAGARKELDKLFRREMEAAGVAVGNLTIFSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGL--QTISDCQIKKDPKKGDVYLAVLRKPKR 118 + EE GP VGA +A+DGF R G+ +++ + ++K + AV+ KP + Sbjct: 61 KETEAVREEAKGPPVGAPDQAVDGFCRKNGVTRESLEEREVKGRA----TWFAVIEKPGQ 116 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + D+L +P I WPKSMRW + W+RPL I+ +L E ++ Sbjct: 117 AVADLLAAAIPAIISDFSWPKSMRWGDASISSESTRWVRPLSGIVALLDGE-----VVPC 171 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + G +T GHRFH+ I + D Y L + V++D E R N I A A+ Sbjct: 172 VTDGMASGRVTMGHRFHSDGGIPIDDADDYAPRLRDEYVIVDHEERANIIREGASNAAAD 231 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 GL+LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK FV +G Sbjct: 232 AGLKLVEDEGLVIENAGLTEWPVPLLGRFDEAFLDVPPEVIQLTARVNQKYFVCEDADGE 291 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LAN FI +NI + D +V GN +V+AARL DA FW+ DQ +L E A Sbjct: 292 LANAFICTANIASVDP-TGVVDGNRKVLAARLADARFFWELDQKK-----TLAEHA---- 341 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVALVDRAI 415 K L++ + FH K+GT ++V R+ L + A+ + D L A Sbjct: 342 ----KGLER---------ITFHEKLGTVADKVDRVAKLASWLVFDAKEPNGDHQLTRTAA 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSKADL TE+V EFPELQG +G YA + + DA+ +H KP G ++VPT ++ Sbjct: 389 ELSKADLVTEMVGEFPELQGLMGGYYAQKEGQPQEVADAVRDHYKPVGQGDDVPTAPTTV 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 VSLADKLD L++F+ I+ P+GSKDP+ALRRA LG IR++ N + + L Q + Sbjct: 449 AVSLADKLDNLLSFFKIDILPTGSKDPFALRRAALGYIRLVQANGLKLSLDQVVHAWDSQ 508 Query: 531 -----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI----KHLNEFF 581 + L F HDRL + L D +RHD I A R + ++ +D + + L F Sbjct: 509 PNQSLAEKLTEFLHDRLAVQLRDEGVRHDFIRAS-RDWSGSIDMRIDRVEARARALTRFL 567 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G L KR IL EE + +E+S P AEK L I+ + Sbjct: 568 GSDDGTNLLAGYKRAANILKKEEWEAKEVSYSPEP------AEKALIDAINAAAPKAAAA 621 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ +R+ L ++ PI+ FFD+V VN D+ R RL LL + + V + +I Sbjct: 622 VNEERFEDAMAALATLRAPIDAFFDEVTVNDDNENKRAARLDLLARFTSAVGQVADFSRI 681 >gi|330993190|ref|ZP_08317127.1| Glycyl-tRNA synthetase beta subunit [Gluconacetobacter sp. SXCC-1] gi|329759741|gb|EGG76248.1| Glycyl-tRNA synthetase beta subunit [Gluconacetobacter sp. SXCC-1] Length = 686 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 248/726 (34%), Positives = 375/726 (51%), Gaps = 67/726 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +AA DL +L L + ++ Y P R+ L L + Sbjct: 1 MPELLIELFSEEIPARMQARAASDLERLLCEALAP--LKPRDATAYAGPRRIALALTVDA 58 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK--PKR 118 ++ER GPR A +KA+ GF+R G +++D + VL + P Sbjct: 59 TVPGGTVDER-GPRESAPEKALAGFMRKHG--------VERDALVLENGFWVLHRTIPPV 109 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + I+P +++ PWPKSMRW SAF+W+RPL+ I+C+L K++D Sbjct: 110 DAAKQIADILPGLLRRFPWPKSMRWGVG----SAFTWVRPLRRIVCLL-----DGKVVDF 160 Query: 179 DLKE-------IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 L E + N+T GHRF AP V ++ L V D RR I Sbjct: 161 TLAEGEDNGHGLKSANLTEGHRFTAPGAFAVTGRQDWLDGLRARQVEPDAAARRTTIAEG 220 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 RLA GL +V D L++E+ GL EW F+G D ++ LP E+++++++ NQ+ F Sbjct: 221 VARLAREEGLNVVADPGLIDEVAGLTEWPVPFLGQIDDAFMTLPPEVMQVSMRVNQRYFA 280 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G A F V+N+ DGGA + GN RV+ AR DA HFW Sbjct: 281 LRNADGSAAPRFAFVANLLPDDGGALTIAGNERVLRARFADARHFW-------------- 326 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +LD ++ L R+ LD +VFHA +G+QG RV R+ L +A + ADVA Sbjct: 327 ------DLDRARTLAGRVPGLDR--IVFHASLGSQGARVQRLVRLAGVLAGMTGADVAQA 378 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA +L KADL T +V EFPELQG +G YA E + DAI H PRGP ++VPT Sbjct: 379 ERAALLCKADLTTGMVGEFPELQGIMGAYYARHDGEPDAVADAIGAHYMPRGPQDDVPTA 438 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ V+LADK+D L+ F+A+ EKP GS DPYALRRA LG+IRII EN + + L++ + D Sbjct: 439 PVSVAVALADKIDMLVAFFAVGEKPGGSGDPYALRRAALGVIRIIRENGLRLDLAKVLWD 498 Query: 532 QNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIK 575 L F +RL++ L RHD++ A+ D +++ ++ Sbjct: 499 AAQGLPEALRLAPDLDVLPEFIAERLRVQLRGEGARHDILAAVSVGNTDTDIVRLLARAT 558 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + + ++ G L + KR IL IE++K+ +P EK L + Sbjct: 559 AIADMLATDDGRNMLAATKRAANILRIEDRKDGPHEGTPNPALYTQPEEKALADALEKTT 618 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++++ +RY + S+ ++ FF++V VN D VR NRL LL ++ + +++ Sbjct: 619 PEVEQATAQERYADAMRDVASLRPVLDRFFEKVTVNDPDPAVRANRLRLLSELRRMTVLI 678 Query: 696 INVQKI 701 + +I Sbjct: 679 ADFSQI 684 >gi|87200127|ref|YP_497384.1| glycine--tRNA ligase [Novosphingobium aromaticivorans DSM 12444] gi|87135808|gb|ABD26550.1| glycyl-tRNA synthetase beta chain [Novosphingobium aromaticivorans DSM 12444] Length = 738 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 262/766 (34%), Positives = 383/766 (50%), Gaps = 101/766 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ SEEIPARMQ A DL + L G+ + + TP RL L + L P Sbjct: 5 DFLLELRSEEIPARMQAGARADLEKLFRKELDAAGLKAGEVTVWSTPRRLALIARAL-PL 63 Query: 63 SPEKIEERL-GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 + E + E + GPR A ++A++GFLR TGL D ++D V+ AV KP R Sbjct: 64 ATEAVSEEVKGPRTSAPEQALEGFLRKTGL--TRDQLTERD----GVWFAVTEKPGRATR 117 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 DVL VP I+ PWPKS RW + W+RPL I+ IL + +++ ++ Sbjct: 118 DVLAEAVPAIIRAFPWPKSQRWGAASLSTESLRWVRPLSGIVAIL-----GDDLVECEIG 172 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 + G T GHRFH P I + S Y L V++D R + + A A A GL Sbjct: 173 AVKSGYATRGHRFHCPGEITIGSAHDYADKLRACHVIVDHVEREAMVRDKAKAAAEAAGL 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK F+ R G LAN Sbjct: 233 VLVEDEGLVIENAGLTEWPVPLLGRFDEAFLDVPPEVIQLTARVNQKYFICRDSAGKLAN 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+ +NI+A DGGAAIV GN +V+AARL DA FW++D+ Sbjct: 293 AFVCTANIEAKDGGAAIVDGNRKVLAARLSDARFFWEQDKK------------------- 333 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLS 418 KPL ++ +L + FH K+GT ++V R+ L + +A + + D AL +A L Sbjct: 334 -KPLAEQAQKLSR--ITFHEKLGTVADKVQRVVKLAEWLASEGIVPNCDPALARQAAELC 390 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G YA + + DAI +H KP G ++VPT +++ V+ Sbjct: 391 KADLVTEMVGEFPELQGLMGGYYARAEGLPDAVADAIRDHYKPVGQGDDVPTAPVTVAVA 450 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGII--------RIILENKIDIPLSQFIE 530 LADKLDTL+ F+ I+++P+GS+DP+ALRRA LG++ R+ + I L+ F + Sbjct: 451 LADKLDTLVGFFLIDQRPTGSRDPFALRRAALGVLELLNWGSLRVSMWEAIAKALAAFTK 510 Query: 531 -----------------DQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILR-PENDNL 567 +Q + FF DRLK+ + +RHDLI+A+ D+L Sbjct: 511 QLVSDDMAEASYEAFQTNQKAVFTTLPDFFADRLKVQQREAGVRHDLIDAVFALGGEDDL 570 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL-----AIEEKKNREISLEISPQY---- 618 + ++ + L F + G L KR IL A E + P Sbjct: 571 VRLLARVHALQAFVGTEDGTNLLAGYKRAANILKKEGFAANPNAGSEGEGVVPPTGEEDP 630 Query: 619 LLLEAEKRLYAVISDFG------------THIQESMDHKRYHQIGD-----------LLH 655 L+L + + V++ F + +++D+ G +L Sbjct: 631 LVLVDDPAMEGVVAQFSHPECNYQREPAEQALVDALDYAEPAARGAVESEDFDFAMRVLA 690 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 S+ PI+ FFDQV VN D R +RL+LL + + V + +I Sbjct: 691 SLRAPIDSFFDQVTVNDADANKRSSRLALLDRFRAAVHKVADFSRI 736 >gi|148557751|ref|YP_001265333.1| glycine--tRNA ligase [Sphingomonas wittichii RW1] gi|148502941|gb|ABQ71195.1| Glycine--tRNA ligase [Sphingomonas wittichii RW1] Length = 677 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 258/716 (36%), Positives = 366/716 (51%), Gaps = 56/716 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPARMQ KA+ DL+ + L + G+ + Y TP RL L GL Sbjct: 1 MADFLLELLSEEIPARMQEKASADLARLFTEELAKAGLTPDGITSYVTPRRLALIAHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP+ A +A++GFLR TGL + +++D AV+ KP R Sbjct: 61 VETAAVSEELKGPKASAPPQALEGFLRKTGL--TREQLVERD----GTLFAVIEKPGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL +P ++ PWPKSMRW T +A W+RPL+ I+ +L E+I+ ++ Sbjct: 115 AAVLAEAIPAIVRNFPWPKSMRWGTASLSTAALRWVRPLQGIVALL-----GEEIVPFEI 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G T GHRFH P I + S Y L V++D RR+ I A LA+ G Sbjct: 170 DGVASGAATVGHRFHHPGIITIGSAADYAGKLRACHVIVDHAERRDIIRARAAELAAGQG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + ++ D+ L+ E GL EW +G FD +L +P E+I+LT++TNQK FV EG LA Sbjct: 230 MTVIPDEGLVAENAGLTEWPVPLLGHFDPAFLEVPREVIQLTLRTNQKYFVLNDAEGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI A DGGAAIV GN +V+AARL DA FW++ D Sbjct: 290 PAFICTANISARDGGAAIVAGNGKVLAARLSDAKFFWEQ--------------------D 329 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVALVDRAIVLS 418 L PLD + +L+ + +F+ +GT E+ RI L IAQ + D RA +L+ Sbjct: 330 LKVPLDDYLPKLEAM--LFYEGMGTLREKADRIAALAAWIAQAYFPERDPETARRAGLLA 387 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T +V EFPELQG +G YA + E A+++ +E I V+ Sbjct: 388 KADLATAMVGEFPELQGVMGGYYAEKRGEKPGTVSALKQQYV--AAVEGC----IPACVA 441 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 LAD++DTL+ F+A KP+GSKDP+ALRRA L I+ IL N + L IE Sbjct: 442 LADRIDTLVAFFARGIKPTGSKDPFALRRAALQTIQTILVNGTRMNLLATIEQAKTGLGA 501 Query: 531 ----DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAK 585 L+ FF DRLK+ + +RHDLI+A+ D+L+ ++ +K L F + Sbjct: 502 SGLDSAELLDFFADRLKVQQREAGVRHDLIDAVFALGGEDDLVRLLARVKALQAFVETED 561 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G L KR IL E S +P Y AE L A + +++ + Sbjct: 562 GANLLAGYKRAANILRKEGGVPEGAS--ATPDYQPEVAESALIAALDAAEPKAAAAVEAE 619 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ PI+ FFDQV+VN R+ RL+LL+ I+ + V + I Sbjct: 620 DFAGAMAALATLRGPIDAFFDQVIVNDSSSSKRNTRLALLEKIRVAVHNVADFSNI 675 >gi|329850859|ref|ZP_08265704.1| glycyl-tRNA synthetase beta subunit [Asticcacaulis biprosthecum C19] gi|328841174|gb|EGF90745.1| glycyl-tRNA synthetase beta subunit [Asticcacaulis biprosthecum C19] Length = 682 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 259/731 (35%), Positives = 388/731 (53%), Gaps = 78/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP L+E++SEEIPARMQ AA D + L G+ +++++ Y P RL L ++GL Sbjct: 1 MPQLLIELFSEEIPARMQLGAARDFERLFGAKLNTSGLSFESIKAYVAPRRLALVVEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EE GP+ GA ++A+ GFLR GL D + ++ V++A + KP R Sbjct: 61 AEQAAVTEEVKGPKDGAPEQAMAGFLRKVGL--TQDQLVLEN----GVWMARIEKPGRRT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D L ++ I PWPKSMR S +S+F W+RPLK IL + + I+ +L Sbjct: 115 VDALPDMLREVILAFPWPKSMR-----SGVSSFRWVRPLKRILFLFDGQ-----IVPFEL 164 Query: 181 KEIPCGNITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + + ++T GHRF + + V Y + L + V+LD R+ IL +A + Sbjct: 165 EGLTASSLTEGHRFLGSGKALNVSDFASYHKALADNSVILDHAERQAFILKEAKAVCEDT 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GV 298 G EL+ED+ LLEE+ GL E+ +G D K+L LP E+I+ +++T+QK F R + G Sbjct: 225 GCELIEDQGLLEEVAGLNEFPMPILGDMDPKFLALPPEVIKTSMRTHQKYFAVRDKATGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 +A FI+V+NI+A DGG I +GN++V++ARL D + FW D N N Sbjct: 285 MAPHFIIVANIRARDGGDEIKRGNAKVLSARLSDGVFFWNED-NKAGNF----------- 332 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 D + RL FH K+GT +RV RI L IA + AD+A A L+ Sbjct: 333 -------DGWLERLK--GTTFHVKLGTMAQRVERISALAAHIAGHLGADIAAAREAARLA 383 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +++V EFPELQG +G YA DAI EH KP+GP ++VP K+S V+ Sbjct: 384 KADLASKMVGEFPELQGVMGGYYADALKLKPEIADAIREHYKPQGPSDSVPAGKVSAAVA 443 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADK+DTL+ F+AI EKP+GSKDPYALRR+ LG++RII E+ + L ++ Sbjct: 444 LADKIDTLVGFFAIGEKPTGSKDPYALRRSALGVLRIIREHGATLHLGGLVDAWYRSRGE 503 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ FF DRLK+ L D R D++EA +D+++ + I+ + Sbjct: 504 LPVAVQDVEAVRPEVLDFFADRLKVQLRDEGRRFDVLEATR--GSDDVVNTITRIEAVEA 561 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY--------LLLEAEKRLYAVI 631 ++ +GE L KR ILA + ++S + Y LLEA L Sbjct: 562 VIATPQGEDLLTLHKRAANILAASKT---DLSHAMPQAYEGIDPLEKALLEA---LNVAR 615 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 SD +HI E + Y + ++ + ++ F D VLVN DD +V+ NRL++L+ + + Sbjct: 616 SDVVSHISE----ENYAGALKSIAALRQNVDSFLDGVLVNADDEKVKVNRLAILRGVCEL 671 Query: 692 ILIVINVQKIV 702 + ++ KI Sbjct: 672 SAPIADLSKIA 682 >gi|149914420|ref|ZP_01902951.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. AzwK-3b] gi|149811939|gb|EDM71772.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. AzwK-3b] Length = 751 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/534 (41%), Positives = 317/534 (59%), Gaps = 26/534 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL + L E G+ Y + + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAADLRARMTDGLVEAGLTYSGAQAFATPRRLTLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EE GPR A +KAI+GFLR G+ T + +I+ D KKG V+ A + +P R Sbjct: 61 AASPTVTEELKGPRADAPEKAIEGFLRGAGV-TREELEIR-DEKKGQVFYAKIMRPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ ++ ++ PWPK+MRW + W+RPL+SILCIL + + +I+DL++ Sbjct: 119 EAIVAEVLDHVVRNFPWPKAMRWGA-----GSLRWVRPLQSILCILTDDAGEARIVDLEI 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N T GHRF V S + Y L+ V+LD + R + I +DA A A G Sbjct: 174 DGIKACNTTEGHRFMGGGQFAVSSFEDYEAGLKRDHVILDAQQRADHIWHDATSQAFAAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG D+++L LP E+++ ++K +QK F R Sbjct: 234 LEVVEDQGLLSEVAGLVEWPVVLMGQIDEEFLGLPAEVLQTSMKEHQKFFSVRNPATGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI+++D GA I+ GN +V+AARL DA FW +N+L + E ++ Sbjct: 294 ERFITVANIESADHGATILAGNQKVLAARLSDAKFFW---ENDLRIAHAGMEEWIE---- 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V F ++GTQ R+ RI L + IA + AD ++A ++KA Sbjct: 347 ------------QLSNVTFQRQLGTQAARIRRIAALARDIAADVGADAGRAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A EEH +P GP + VP +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPDDVAAACEEHYRPLGPSDAVPVAPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IRIIL+ + L ++I+ Q L Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRIILDGGFRLKLDRYIDAQLL 508 Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 2/171 (1%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L++FFHDRLK+YL D+ +RHD+I+A L + D+L IV K L + + G + Sbjct: 579 DLLVFFHDRLKVYLRDQGLRHDVIDACLMLDGGDDLALIVARAKALGDVLETEDGVNLVQ 638 Query: 592 SAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR IL+ EEK E S P++ + EK L++ ++ I ++ + + Sbjct: 639 GFKRANNILSQAEEKDGVEYSFGADPKFAEVSEEKYLFSALAKAEDEIAKANAVEDFVGA 698 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FFD V VN D++ VR NRL+LL I++I L ++ K+ Sbjct: 699 MAAMAALRGPIDAFFDAVQVNTDNQVVRRNRLNLLGKIRDICLQAADLTKL 749 >gi|302383878|ref|YP_003819701.1| glycyl-tRNA synthetase subunit beta [Brevundimonas subvibrioides ATCC 15264] gi|302194506|gb|ADL02078.1| glycyl-tRNA synthetase, beta subunit [Brevundimonas subvibrioides ATCC 15264] Length = 729 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 214/521 (41%), Positives = 300/521 (57%), Gaps = 41/521 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP L+E++SEEIPARMQ AA DL + LK G+ + + + P RL L + GL Sbjct: 1 MPQLLIELFSEEIPARMQGGAARDLERMATERLKAAGLSWDALTTWAGPRRLTLVIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +P++ EE GPR A ++A++GFLR TGL D ++D V AV+ + R Sbjct: 61 AATPDRSEELKGPRANAPEQALEGFLRKTGL--TRDQLTERD----GVLFAVIEEAGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 V+ + ++ PWPKSMRW + W+RPLK I+ + E ++ + Sbjct: 115 TTVIAETLDQIVRAFPWPKSMRWGS-----GTLRWVRPLKRIVALF-----DEAVVPFAI 164 Query: 181 KEIPCGNITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I G++T GHRF A P V+ Y L++ VLLD R+ IL A A Sbjct: 165 DGIQSGDVTEGHRFMGAGQPFAVKDFADYRAKLDQHFVLLDAADRKLKILEAARAACHAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGV 298 GLELV+D LL+E+ GL EW +G D ++L LP E++RL++K +QK F R G Sbjct: 225 GLELVDDDGLLDEVAGLAEWPTPILGDMDPQFLALPPEVVRLSMKVHQKYFAVRDPATGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI+V+N++ASDGG A+ GNSRV++ARL DA FW D+ + E Sbjct: 285 LAPNFIVVANVEASDGGVALAAGNSRVLSARLNDARFFWDEDRKT--GFDAWNEK----- 337 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + V FHAK+GT RV RI L ++IA L+ AD + A LS Sbjct: 338 ---------------LKGVTFHAKLGTLAGRVDRIAALAREIAPLVGADPDQAETAARLS 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA + + + DA+ +H KP+GP ++VPT +++ V+ Sbjct: 383 KADLASAMVGEFPELQGIMGGYYARADHGD-AIADAVRDHYKPQGPADSVPTAPLTVAVA 441 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 LADKLDTL+ F+AI+EKP+GSKDP+ALRRA LG+IR+IL+N Sbjct: 442 LADKLDTLVGFFAIDEKPTGSKDPFALRRAALGVIRLILDN 482 Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 8/186 (4%) Query: 524 PLSQFIEDQ-----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 P+ +ED L+ FF DRLK+ L D+ RHDL++A+ +D+L+ IV ++ L+ Sbjct: 544 PVGHTVEDDVANVDALLAFFADRLKVLLRDQGKRHDLVDAVFALGDDDLVRIVRRVEALD 603 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL--LEAEKRLYAVISDFGT 636 F ++ G L KR IL E KK E+ + L EAE L T Sbjct: 604 AFLATDDGANLLAGYKRASNILKAEAKKG-EVPTGMVATGLANQPEAETTLAFATDVART 662 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + +++ + + L + P++ FF V+VN D RDNRL LL +++++ V Sbjct: 663 AVDTALETEDFAAAMTALSRLRAPVDAFFTDVMVNSDVPAERDNRLKLLGQVRDVMGRVA 722 Query: 697 NVQKIV 702 + ++ Sbjct: 723 DFGQVA 728 >gi|103487096|ref|YP_616657.1| glycine--tRNA ligase [Sphingopyxis alaskensis RB2256] gi|98977173|gb|ABF53324.1| Glycine--tRNA ligase [Sphingopyxis alaskensis RB2256] Length = 723 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/755 (34%), Positives = 380/755 (50%), Gaps = 88/755 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPARMQ A +L + + G++ ++ + TP RL L + L Sbjct: 1 MTDFLLELRSEEIPARMQAGARAELEKLFRTQMSAAGIVVGDLTIWSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL Q + + + G V+ AV+ KP R Sbjct: 61 DATAAVSEELKGPRTSAPPQALEGFLRKTGL-----TQDQLEDRDG-VWFAVIDKPGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +P ++ WPKSMRW + + W+RPL I+ I E +I ++ Sbjct: 115 AEVLAEAIPAIVRAFAWPKSMRWGRDSASSESLRWVRPLSGIVAIF-----GEALIPCEV 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRFH P I + S Y L V++D R I + A + A+ G Sbjct: 170 GGISAGFATRGHRFHCPGEITIGSASDYAEKLRACHVIVDHAERARIIRDGAAKAAADAG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK FV +G LA Sbjct: 230 LSLVEDEGLVIENAGLTEWPVPLLGRFDEAFLAVPPEVIQLTARVNQKYFVVNDADGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+ +NI A DGGA IV GN +V+AARL DA FW++D+ L+ D Sbjct: 290 NGFVCTANIDAVDGGAEIVAGNQKVLAARLSDARFFWEQDRKT--KLA-----------D 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVL 417 +K LD+ + FH K+GT ++V R+ L + +A + + D AL +A L Sbjct: 337 HAKKLDR---------ITFHEKLGTVADKVERVAKLAEWLANEGIVPNCDPALARQAAEL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G YA + + DAI +H KP G ++VPT +++ V Sbjct: 388 AKADLVTEMVGEFPELQGLMGGYYARAEGLPQAVADAIRDHYKPVGQGDDVPTAPVTVAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI--DI-----PLSQFIE 530 +LADKLDT+ F+ N KP+GSKDP+ALRRA LGII + + + + DI ++ Sbjct: 448 ALADKLDTIAGFFMKNMKPTGSKDPFALRRAGLGIIALTVRSSLRGDIGTWLAAARRYFV 507 Query: 531 DQNLI-----------------------------LFFHDRLKLYLHDRDIRHDLIEAILR 561 DQ+++ F DRLK+ + +RHDLI+A+ Sbjct: 508 DQDIVDEREYPDAYATKDAAISAGLATVFMDEVRDFIADRLKVQQREAGVRHDLIDAVFA 567 Query: 562 -PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL--------------AIEEKK 606 D+L+ ++ +K L F ++ G L KR IL A + + Sbjct: 568 LGGEDDLVRLLARVKALQAFMATEDGTNLLAGYKRAANILKQASVPAEAGTRGGAAQVLE 627 Query: 607 NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 L +SP+ + + L A+ + + D +R+ L S+ PI+ FF+ Sbjct: 628 EGTPGLRLSPECMTVHDAALLAALDTAEPAALNAVAD-ERFTDAMAALASLRAPIDAFFE 686 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN D VR RL LL + V + KI Sbjct: 687 GVMVNDPDEVVRAYRLGLLARFTGAVHGVADFSKI 721 >gi|258541399|ref|YP_003186832.1| glycyl-tRNA synthetase subunit beta [Acetobacter pasteurianus IFO 3283-01] gi|256632477|dbj|BAH98452.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-01] gi|256635534|dbj|BAI01503.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-03] gi|256638589|dbj|BAI04551.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-07] gi|256641643|dbj|BAI07598.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-22] gi|256644698|dbj|BAI10646.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-26] gi|256647753|dbj|BAI13694.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-32] gi|256650806|dbj|BAI16740.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653797|dbj|BAI19724.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-12] Length = 686 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 235/719 (32%), Positives = 372/719 (51%), Gaps = 53/719 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +A E+L +L L + QN P R+ L + Sbjct: 1 MPELLIELFSEEIPARMQSQAGENLLRLLTEALAP--LHPQNAVAATGPRRIAASLN-ID 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR GA KA+DGF R G+ D ++ ++ +P Sbjct: 58 ATVPGRTVSERGPREGAPDKALDGFTRKHGV--TRDALTLQN----GFWILEREEPAVSA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII--DL 178 + + ++P +++ PWPKSMRW S+F+W+RPL+ ILCIL E + + Sbjct: 112 QAHIAAVLPDLLRRFPWPKSMRWGAG----SSFTWVRPLRRILCILDGETVPFSLAQGED 167 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + + N+T GHRF P + V S + + L + V++D RR I + LA++ Sbjct: 168 NGHNLVAANLTEGHRFLNPGAVAVSSAAEWRKTLHDRHVMVDAAERRKTITEGLNALAAS 227 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 GL++V D L++E+ GLVEW F+G D +++ LP E+++++++ NQ+ F R +G Sbjct: 228 EGLQIVPDAGLVDEVAGLVEWPVPFLGQIDAQFMELPAEVMQVSMRVNQRYFALRNSDGT 287 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A F V+NI +D G IV GN RV+ AR DA HFW + Sbjct: 288 AAPRFAFVANIVPADDGTLIVTGNERVLRARFADARHFW--------------------D 327 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LD + L R+ LD + FHA +G+QG+R R+ L +A ++ A A +RA LS Sbjct: 328 LDRKQTLASRLKALD--SITFHASLGSQGDRTRRMVRLAGILADMVGAPKADCERAAKLS 385 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFPELQG +G YA E+ + AI E PRGP ++VPT +S+ + Sbjct: 386 KTDLTTGMVGEFPELQGVMGGYYAKHDGESAAVAQAISEQYTPRGPGDSVPTAPVSVVLG 445 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LAD++D L+ F+A EKPSGS DP+ LRRA LG+IR+I EN + + L + Sbjct: 446 LADRIDMLVAFFAAGEKPSGSGDPFGLRRAALGVIRLIRENNLRLDLVRLFVLAAEALPA 505 Query: 530 -----EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFS 582 D +L+ F +RL++ + RHD + AI +D +++ ++ L + Sbjct: 506 DLQDAPDLDLLPQFIAERLRVQVRSEGARHDCLAAISVDNSDTDIVRLLARAHALQDMLE 565 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + G+ L + +R IL IE+KK+ P + E+ L+ + +++ Sbjct: 566 TEDGKNLLAATRRAANILRIEDKKDGPHEDMPDPALFTQDEERALFDALERVEPAVEKDF 625 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +R+ S+ EP++ FF+ V VN + E+R NRL LL + ++ ++ + +I Sbjct: 626 AAERFTDAMREAASLREPLDKFFEVVTVNAPEPELRLNRLKLLSRVVRMMRLIADFSQI 684 >gi|329114987|ref|ZP_08243742.1| Glycyl-tRNA synthetase beta subunit [Acetobacter pomorum DM001] gi|326695430|gb|EGE47116.1| Glycyl-tRNA synthetase beta subunit [Acetobacter pomorum DM001] Length = 709 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 237/721 (32%), Positives = 371/721 (51%), Gaps = 57/721 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +A E+L +L L + QN P R+ L + Sbjct: 24 MPELLIELFSEEIPARMQSQAGENLLRLLTEALAP--LHPQNAVAATGPRRIAASLN-ID 80 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK--PKR 118 P + GPR GA KA+DGF R G + +D VL + P Sbjct: 81 ATVPGRTVSERGPREGAPDKALDGFTRKHG--------VTRDALTLQNGFWVLEREEPAV 132 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII-- 176 + + ++P +++ PWPKSMRW S+F+W+RPL+ ILCIL E + Sbjct: 133 SAQTHIAAVLPDLLRRFPWPKSMRWGAG----SSFTWVRPLRRILCILDGEAIPFSLAQG 188 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + N+T GHRF P + V S + + L + V++D RR I + LA Sbjct: 189 EDNGHNLVAANLTEGHRFLNPGAVAVSSATEWRKTLHDRHVMVDAAERRKTIAEGLNTLA 248 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++ GL++V D L++E+ GLVEW F+G D +++ LP E+++++++ NQ+ F R + Sbjct: 249 ASEGLQIVPDSGLVDEVAGLVEWPVPFLGQIDAQFMELPAEVMQVSMRVNQRYFALRNSD 308 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G A F V+NI +D G IV GN RV+ AR DA HFW Sbjct: 309 GSAAPRFAFVANIIPADDGTLIVTGNERVLRARFADARHFW------------------- 349 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 +LD + L R+ LD + FHA +G+QG+R R+ L +A ++ A A +RA Sbjct: 350 -DLDRKQTLASRLKALD--SITFHASLGSQGDRTRRMVRLAGILADMVGAPKADCERAAE 406 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSK DL T +V EFPELQG +G YA E+ + AI E PRGP ++VPT +S+ Sbjct: 407 LSKTDLTTGMVGEFPELQGVMGGYYAKHDGESAAVAQAISEQYTPRGPGDSVPTAPVSVV 466 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------- 529 + LAD++D L+ F+A EKPSGS DP+ LRRA LG+IR+I EN + + L + Sbjct: 467 LGLADRIDMLVAFFAAGEKPSGSGDPFGLRRAALGVIRLIRENNLRLDLVRLFVLAAEAL 526 Query: 530 -------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEF 580 D +L+ F +RL++ + RHD + AI +D +++ ++ L + Sbjct: 527 PADLQDAPDLDLLPQFIAERLRVQVRSEGARHDCLAAISVDNSDTDIVRLLARAHALQDM 586 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G+ L + +R IL IE+KK+ P + E+ L+ + +++ Sbjct: 587 LETEDGKNLLAATRRAANILRIEDKKDGPHEDSPDPALFTQDEERALFDALERVEPAVEK 646 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 +R+ S+ EP++ FF+ V VN + E+R NRL LL + ++ ++ + + Sbjct: 647 DFAAERFTDAMREAASLREPLDKFFEVVTVNAPEPELRLNRLKLLSRVVRMMRLIADFSQ 706 Query: 701 I 701 I Sbjct: 707 I 707 >gi|114328763|ref|YP_745920.1| glycyl-tRNA synthetase subunit beta [Granulibacter bethesdensis CGDNIH1] gi|114316937|gb|ABI62997.1| glycyl-tRNA synthetase beta chain [Granulibacter bethesdensis CGDNIH1] Length = 684 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 251/695 (36%), Positives = 378/695 (54%), Gaps = 61/695 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE++SEEIPARMQ KA EDL + L + + +++R + P RL L + Sbjct: 1 MPELLLELFSEEIPARMQVKAGEDLVRLAGEALAD--LSPRDLRWHVGPRRLALTAT-VE 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR+GA ++A+ GFLR G +D ++ +GD ++ P R Sbjct: 58 AGVPARSGNERGPRIGAPEQALAGFLRKYG----ADRSALRE--EGDYWVLDTSSPGREA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII--DL 178 ++ ++P + K PWPKSMRW + S F+W+RPL+ ILC L + D Sbjct: 112 AALIAEVIPALLWKFPWPKSMRWGGS----SLFTWVRPLRRILCQLDGAVVPFSLAQGDD 167 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 D + G+ T GHRF +P +KV+ + + L V+LD E RR + R+A+A Sbjct: 168 DGHGLRSGDETEGHRFLSPGAVKVRGIAEWQAALAGRHVVLDIEERRRRVAEGIARVAAA 227 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 GL +V+D L++E+ GLVEW +G D +Y+ LP E+++++++ NQ+ F R EG Sbjct: 228 HGLTVVDDPGLVDEVAGLVEWPVPLLGRIDDQYMSLPAEVMQVSMRVNQRYFALRDAEGK 287 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A F ++NI+A+D G AI+ GN RV+ AR DA HFW +D+ Sbjct: 288 AAPYFAFIANIEATDQGRAIMAGNERVLRARFADARHFWDQDRK---------------- 331 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 +PL R+A L+ V +HAK+G+Q V+R+R L ++IA L+ AD D A +L+ Sbjct: 332 ----EPLASRLAVLER--VTYHAKLGSQAALVARLRRLAREIAPLVGADARDADGAALLA 385 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T +V EFPELQG +G+ YA+ E+ DAI +H P+GP + VP +SI V+ Sbjct: 386 KADLTTGMVGEFPELQGVMGRYYALHDGESPWIADAIRDHYAPKGPSDPVPDAPVSIAVA 445 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ---FIEDQ--- 532 LADK+D L F++I E P+GS DP+ALRRA LGIIRII EN + +PL + F D+ Sbjct: 446 LADKIDRLAMFFSIGEAPTGSGDPFALRRAALGIIRIIRENGLRLPLGRLFAFASDEAPV 505 Query: 533 -NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN----------LLTIVDLIKHLNEFF 581 +L+ F +RL++ L RHD++ A+ D+ LL D + L Sbjct: 506 ADLLAFMAERLRVQLRAEGARHDVLAAVFAVHADDTAEGAGDIVRLLARADAVAAL---L 562 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA--EKRLYAVISDFGTHIQ 639 S G L + KR IL IE++K+ + +P LLE E+ L + + + Sbjct: 563 VSEDGANLLAAYKRAANILRIEDRKDG--PHQGTPDESLLEVPEERALAEALQEAEPAVM 620 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 ++D + L + P++ FFDQV VN ++ Sbjct: 621 AALDAEDDATAMASLARLRGPLDAFFDQVTVNAEE 655 >gi|296532281|ref|ZP_06895021.1| glycyl-tRNA synthetase beta subunit [Roseomonas cervicalis ATCC 49957] gi|296267397|gb|EFH13282.1| glycyl-tRNA synthetase beta subunit [Roseomonas cervicalis ATCC 49957] Length = 747 Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust. Identities = 268/773 (34%), Positives = 391/773 (50%), Gaps = 100/773 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE++SEEIPARMQ +AAEDLS ++ LK G+ Q +R + P RL L + Sbjct: 1 MPELLLELFSEEIPARMQARAAEDLSRLMGEALKGAGLAPQGVRVFHGPRRLTLLAE--L 58 Query: 61 PHSPEKIEERL-GPRVGAGKKAIDGFLRSTGLQ------------------TISDCQ--- 98 P + E +++ L GP A +A+ GFL GL T+ + Sbjct: 59 PAATEAVQDELAGPAPEAPDRALAGFLGKLGLGESLVPTLREAAAGAGEGETVLHAEGAV 118 Query: 99 --IKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWI 156 + + KKG L +P +L I+P +++ PWPKSMRW T S F W+ Sbjct: 119 TLVLRREKKGGKLLGRSARPAVPTGALLAEIIPGILRRFPWPKSMRWGGT----SNFVWV 174 Query: 157 RPLKSILCILVAEDAKEKII--DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE 214 RPLK ILC+ ++ + D + G+ T GHR +P V + Y L Sbjct: 175 RPLKRILCLFDGAVVPFTLVQGEDDGHGLRSGDRTEGHRILSPGDFAVHNFADYAAQLAA 234 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+LDP R + + LA+A G+E+V D+ L+ E+ GLVEW +G D ++ L Sbjct: 235 RHVVLDPVERAKLVRDGVAALAAAEGVEVVPDEGLVAEVAGLVEWPVPLLGRIDDAFMDL 294 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P EL+R T++ NQ+ F R +G A CF LVSNI A+DGG A+ GN RV+ ARL DA Sbjct: 295 PPELMRTTMRVNQRYFALRKPDGTAAPCFALVSNIAATDGGKAVAGGNERVLRARLSDAR 354 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 FW +LD + L+ + +LD VVFHAK+GTQG+RV+R+ Sbjct: 355 FFW--------------------DLDRKQALESFLPKLD--SVVFHAKLGTQGQRVARLE 392 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +A + AD AL RA L+KADL T +V EFPELQG IG+ YAV E+ +A Sbjct: 393 RLAAWLAPKLGADAALAARAAKLAKADLATGLVGEFPELQGIIGRYYAVKDGEDSRVAEA 452 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 I H +P GP + VP+ ++I V+LADKLD L F+A+ EKP+GS DP+ALRRA LGIIR Sbjct: 453 IAAHYRPAGPGDAVPSEPVAIAVALADKLDQLAGFFAVGEKPTGSGDPFALRRAALGIIR 512 Query: 515 IILENKIDIPLSQFIED------------------------------------------- 531 I+ EN + + L+ + + Sbjct: 513 ILRENGLRLDLADALAEAFFGFPQAVGSTAEPEFGMAVAQEAMKAGFQPDPKSAHPPMVA 572 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 L+ F +RL++ L RHD++ A+L +L+ ++ L F G Sbjct: 573 AFAAGLLDFLAERLRVQLRAEGERHDVLAAVLPAGGADLVRLLARAAALRGFLEGEDGAN 632 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L +++R IL IE+KK+ E L+ E EK L A + + + ++ + Sbjct: 633 LLAASRRAANILRIEDKKDGPHRPETDAALLVAEEEKALSAALDEALPRARAALAAEDDT 692 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ P++ FFD+V+VN + ++R NRL LL +++ I V + KI Sbjct: 693 AAMAALATLRAPVDAFFDKVVVNDPEAKLRRNRLGLLARLRSAIDQVADFSKI 745 >gi|294011764|ref|YP_003545224.1| glycyl-tRNA synthetase beta chain [Sphingobium japonicum UT26S] gi|292675094|dbj|BAI96612.1| glycyl-tRNA synthetase beta chain [Sphingobium japonicum UT26S] Length = 763 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 259/798 (32%), Positives = 383/798 (47%), Gaps = 137/798 (17%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ KA+EDL+ + L + G+ +++ + TP RL L + L Sbjct: 6 MTDFLLELRCEEIPARMQLKASEDLARLFTEELAKSGLKPESIDSFVTPRRLALIARNLP 65 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL Q + + + G V+ A + KP R Sbjct: 66 LETAAVSEEHKGPRTSAPAQALEGFLRKTGL-----TQDQLEDRDG-VWFATVNKPGRAS 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL VP I+ PWPKSMRW + W+RPL+ I+ IL E+++D+++ Sbjct: 120 AQVLAEAVPAVIRAFPWPKSMRWGKASQTTESLRWVRPLQGIVAIL-----GEELVDIEI 174 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T GHRFH P I + Y L V++ R++ I A A+A G Sbjct: 175 EGIKSGYATLGHRFHHPGEITIGGAHDYAEKLRACHVIVSHRERQSIIEAKAAEAAAAHG 234 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++EDK L+ E GL EW +G FD +L +P E+I+LT++ NQK FV R G LA Sbjct: 235 YTVIEDKGLVAENAGLTEWPVPLLGDFDPAFLEVPPEVIQLTLRINQKYFVLRDASGKLA 294 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI+A DGGAAIV GN +V+AARL DA FW++D+ + L++ A K Sbjct: 295 PAFICTANIEAKDGGAAIVAGNRKVLAARLSDARFFWEQDRK-----TKLEDHAKKLE-- 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI----------------AQLI 404 + FH K+GT ++V R+ L + + +L Sbjct: 348 ---------------RITFHEKLGTVADKVERVAKLARWLVEEGIVQSNKEGQQPETELF 392 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 +A ++ A L+KADL TE+V EFPELQG +G YA + + + DAI +H KP G Sbjct: 393 NAALS----ASRLAKADLVTEMVGEFPELQGVMGGYYARAEGLSGAVADAIRDHYKPIGQ 448 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VPT ++ VSLADKLD ++ F+AI+EKP+GSKDP+ALRRA LGI+ +I +++I +P Sbjct: 449 SDEVPTAPATVVVSLADKLDNILAFFAIDEKPTGSKDPFALRRAGLGILSLIGQSEIRLP 508 Query: 525 LSQF----------------IEDQNLILFFHDRLKLYLHDRDI----------------- 551 S+ +ED F HD + +L R + Sbjct: 509 FSKIGPQYLALLAKQIASRGLEDTGYSSFAHDVYQDWLAGRPLTRNEDGSISRMNDDGGS 568 Query: 552 RH-------------DLIEAILRPEND--------------------------------- 565 RH D+ EA+++ D Sbjct: 569 RHYSQELAPLIRYAADVHEAVMKSAPDVLPFLADRLKVQQKEAGVRHDLIDAVFALGGED 628 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS-LEISPQYLLLEAE 624 +L+ ++ +K L F ++ G L KR IL E + E + L +P+ Sbjct: 629 DLVRLLARVKALQSFVATDDGTNLLAGYKRAANILKKEGVETAEATQLTYTPEPAEAALI 688 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L A ++ + + L ++ PI+ FF+ V VN D R RL+L Sbjct: 689 AALDAAEP----RATAAVAAEDFEGAMAALATLRAPIDAFFESVTVNDADETKRSARLAL 744 Query: 685 LQYIKNIILIVINVQKIV 702 L ++ + V + KI Sbjct: 745 LSRVRKAVHAVADFSKIA 762 >gi|297717826|gb|ADI50056.1| glycyl-tRNA synthetase beta chain [Candidatus Odyssella thessalonicensis L13] Length = 674 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 252/721 (34%), Positives = 374/721 (51%), Gaps = 74/721 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI SEEIPARMQ KAAED L+E G+ ++ + Y TP RL + GL+ Sbjct: 4 EFLFEILSEEIPARMQVKAAEDFKAAFETGLREAGLSFEAVTTYITPRRLVATISGLASA 63 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + EER GPR+ A + A+ GFL+S+G QT I+KD + A L + Sbjct: 64 TQATTEERRGPRLEAPEAALQGFLKSSG-QTKEQL-IQKD----GYWYANLITEAKPTSC 117 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L I I+ WPKSMRW + +W+RP++ IL +L K I ++ Sbjct: 118 ILPDICRQIIRSFSWPKSMRWHG-----APHTWVRPVRGILAVLAG---KPLIFEVPEFN 169 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + N T GHRF A +V Y +LE+ V+L E R+ ILN L G Sbjct: 170 LVSSNKTKGHRFLASGEFEVTCFSDYQHNLEKNFVILSHEQRQKLILNKLIELGQQQGYS 229 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 L D+ LLEE+ GL E+ Q +G + +L LP++++ +++ +QK F G +A Sbjct: 230 LEHDEKLLEEVAGLSEYPQPLVGKIEGSFLRLPKKVLSTSMRVHQKYFTFTDSLGNIAPI 289 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F LV+N ASD G +++G RV+ ARL DA F+ DQ DL Sbjct: 290 FGLVANTVASDNGTTMLRGYERVLRARLSDASFFY--DQ------------------DLK 329 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 PL + +LD ++FH K+G+ G+RV R+ L A RA L K DL Sbjct: 330 TPLQAYLPQLD--SIIFHTKLGSLGQRVQRLMNLVSSTA---------AKRAAELCKCDL 378 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EFPELQG +G YA Q E +AI +H +P GP + P N ++ ++LA+K Sbjct: 379 VTSMVGEFPELQGYMGGVYAQAQQETAEIAEAITQHYQPVGPQDASPHNPAAMELALAEK 438 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN---------KIDIPLSQFIEDQN 533 LDTL+ F+AI E P+GSKDPYALRRA LGIIRI+ +N KI LS + + Q Sbjct: 439 LDTLVGFFAIGELPTGSKDPYALRRAALGIIRIVRDNNLQDWRLLDKITQALSAY-QAQG 497 Query: 534 LIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPEN--DNLLTIVDLIKHLNEF 580 L + F +RL L +R D + A+L+ N DN+ IV+ IK LNE+ Sbjct: 498 LQINERFSAPAVLDFIMERLGHSLKAEGLRPDTLAAVLQSANRGDNICGIVERIKALNEY 557 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 +S G + +R + IL K+ E +L++ PQ EK L+ + + Q Sbjct: 558 LTSEAGYALRAAFRRAYGIL----PKDHE-ALKVQPQLFTEHEEKALFEELETVNSRCQS 612 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 +++ Y ++ +L + +PI+ FF+ + +N ++ +R+NRL+LLQ + + I+ + K Sbjct: 613 LLENHDYTRLMMILAHLRDPIDAFFN-LKINDENDMIRNNRLALLQLMIHQTAIIADFSK 671 Query: 701 I 701 + Sbjct: 672 L 672 >gi|256112928|ref|ZP_05453836.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 511 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 217/510 (42%), Positives = 294/510 (57%), Gaps = 75/510 (14%) Query: 267 FDKKYLCLPEELIRLTIKTNQKCFVTRTREG----------------VLANCFILVSNIQ 310 F++++L +P E+IRLTI+ NQKCFVTR ++G L+N FILVSN+ Sbjct: 2 FEEEFLAIPPEVIRLTIRANQKCFVTR-KQGDASRLASPAPQHEEIQALSNKFILVSNVA 60 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LDL KPLDQRMA Sbjct: 61 ARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLDLKKPLDQRMA 120 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 RLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KADL TE+V EF Sbjct: 121 RLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKADLQTEVVGEF 180 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LADKLDTL+ FW Sbjct: 181 PELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALADKLDTLVGFW 240 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFI-----EDQNLILFFHD 540 AI+EKP+GSKDPYALRRA LG+IR++L + PL S F + Q + F Sbjct: 241 AIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQMQRKLREFEA 300 Query: 541 RL----------------KLYLHDRDIR------------------HDLIEAILRPEN-- 564 +L L ++++IR HD + L+ E Sbjct: 301 KLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRFKVHLKEEGAR 360 Query: 565 ------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 DNLL + ++ L F + G+ L AKR ILA EEKK +++ Sbjct: 361 YDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAAEEKKGTKVAD 420 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 + P L EK L+ ++ + E++ + ++ L + P++IFFD+VLVN Sbjct: 421 RVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVDIFFDKVLVND 480 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +D VR NRL+LL I+ V + KI Sbjct: 481 EDGNVRANRLALLDQIRAATGKVADFSKIA 510 >gi|296114875|ref|ZP_06833523.1| glycyl-tRNA synthetase, beta subunit [Gluconacetobacter hansenii ATCC 23769] gi|295978581|gb|EFG85311.1| glycyl-tRNA synthetase, beta subunit [Gluconacetobacter hansenii ATCC 23769] Length = 686 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 243/701 (34%), Positives = 366/701 (52%), Gaps = 71/701 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE++SEEIPARMQ +AAEDL +L L + ++ R + P R+ + L+ + Sbjct: 1 MPELLLELFSEEIPARMQQRAAEDLQRLLTEALSP--LDPRDARTFAGPRRIAISLEVDA 58 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK--PKR 118 ++ER GPR A KA+ GF+R G +++D + VLR+ P Sbjct: 59 TVPGSTVDER-GPRESAPDKALAGFMRKHG--------VERDALVLENGFWVLRRDVPAV 109 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + +P +++ PWPKSMRW S+F+W+RPL+ I C+L +++ Sbjct: 110 QAAAHIAVTIPALLRRFPWPKSMRWGVG----SSFTWVRPLRRIACVL-----DGQVVPF 160 Query: 179 DLKE-------IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 L E + N+T GHRF AP V ++ L V RR I Sbjct: 161 TLAEGDDNGHGLVAANLTEGHRFTAPGAFAVTGTQDWLSGLRARQVEPCAVARRTTIAEG 220 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 RLA+ GL +V D L++E+ GL EW F+G D +++ LP E+++++++ NQ+ F Sbjct: 221 VARLAAEEGLGVVSDPALIDEVAGLTEWPVPFLGQIDDEFMTLPPEVMQVSMRVNQRYFA 280 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G A F V+N++ SDGGA + GN RV+ AR DA HFW Sbjct: 281 LRNADGSAAPRFAFVANMEPSDGGALTIAGNERVLRARFADARHFW-------------- 326 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +LD + LD R+A+LD +VFHA +G+QGERV RI L IA ++ AD Sbjct: 327 ------DLDRTHTLDSRVAQLDR--IVFHASLGSQGERVRRIVRLAGLIAPMVGADTKQA 378 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA +L KADL T +V EFPELQG +G YA E+ + DAI H PRG + VP Sbjct: 379 ERAALLCKADLTTGMVGEFPELQGTMGAYYARHDGEDSAVADAIGAHYMPRGQHDGVPHA 438 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +SI V+LADK+D+L+ F+A EKP GS DPYALRRA LG+IRII EN + + L++ Sbjct: 439 PVSIAVALADKIDSLVAFFAAGEKPGGSGDPYALRRAALGLIRIIRENHLRLDLAEIFVM 498 Query: 531 -----DQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT-IVDLIK 575 +NL L F +RL++ L + RHD++ A+ D +T ++ Sbjct: 499 AAHGLPENLRLAPDLDLLPQFVAERLRVQLRNEGARHDILAAVSVGNTDTDITRLLARSD 558 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + ++ G L + KR IL IE++K+ P + E+ L ++ Sbjct: 559 ALADMLATEDGRNLLAATKRAANILRIEDRKDGPHEGAPDPALYAQDEERALADALAHTI 618 Query: 636 THIQESMDHKRY-HQIGDLLHSICEPI-EIFFDQVLVNVDD 674 ++ ++ +R+ + D+ H P+ + FF+ V VN +D Sbjct: 619 PAVESAISEERFADAMRDVAH--LRPVLDRFFEDVTVNAED 657 >gi|254713028|ref|ZP_05174839.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] Length = 509 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/509 (42%), Positives = 293/509 (57%), Gaps = 75/509 (14%) Query: 268 DKKYLCLPEELIRLTIKTNQKCFVTRTREG----------------VLANCFILVSNIQA 311 ++++L +P E+IRLTI+ NQKCFVTR ++G L+N FILVSN+ A Sbjct: 1 EEEFLAIPPEVIRLTIRANQKCFVTR-KQGDASRLASPAPQHEEIQALSNKFILVSNVAA 59 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LDL KPLDQRMAR Sbjct: 60 RDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLDLKKPLDQRMAR 119 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 LD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KADL TE+V EFP Sbjct: 120 LDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKADLQTEVVGEFP 179 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 ELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LADKLDTL+ FWA Sbjct: 180 ELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALADKLDTLVGFWA 239 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFI-----EDQNLILFFHDR 541 I+EKP+GSKDPYALRRA LG+IR++L + PL S F + Q + F + Sbjct: 240 IDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQMQRKLREFEAK 299 Query: 542 L----------------KLYLHDRDIR------------------HDLIEAILRPEN--- 564 L L ++++IR HD + L+ E Sbjct: 300 LAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRFKVHLKEEGARY 359 Query: 565 -----------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 DNLL + ++ L F + G+ L AKR ILA EEKK +++ Sbjct: 360 DAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAAEEKKGTKVADR 419 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 + P L EK L+ ++ + E++ + ++ L + P++IFFD+VLVN + Sbjct: 420 VDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVDIFFDKVLVNDE 479 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKIV 702 D VR NRL+LL I+ V + KI Sbjct: 480 DGNVRANRLALLDQIRAATGKVADFSKIA 508 >gi|58040174|ref|YP_192138.1| glycyl-tRNA synthetase beta chain [Gluconobacter oxydans 621H] gi|58002588|gb|AAW61482.1| Glycyl-tRNA synthetase beta chain [Gluconobacter oxydans 621H] Length = 684 Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 243/718 (33%), Positives = 368/718 (51%), Gaps = 53/718 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F +E++SEEIP+ MQ AA +L +L L G+ +++R ++ R+ L + Sbjct: 1 MAEFFIELFSEEIPSGMQAGAAVELGNMLAKALS--GLNPRDLRTFFGARRIAASLTVDA 58 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + ER GPR GA +KA+ GF R G+ T + ++ + L + R+ Sbjct: 59 EIPARNVSER-GPREGAPEKALAGFTRKHGV-TPDELTLENGFWVLNKSLDPVSAESRVA 116 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL---VAEDAKEKIID 177 E VP + K PWPKSMRW S F+W+RPL+ I C+L V A + D Sbjct: 117 E-----AVPELLWKFPWPKSMRWGAG----SNFTWVRPLRRIACLLDGHVVPFALAREGD 167 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D + N++ GHRF AP P ++ S + +LE V++D + RR+ + RLA Sbjct: 168 -DAHGLKASNLSEGHRFLAPGPFEILSGQQWQEELETRSVIVDMDSRRDMVRTGVTRLAD 226 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ +V+D L++E+ GLVE+ +G D ++ LP E+++++++ NQ+ F R +G Sbjct: 227 QHGIMVVQDDGLVDEVCGLVEYPVPLLGKIDAAFMDLPAEVMQVSMRINQRYFALRNPDG 286 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 A F V N+ DGG GN RV+ AR DA HFW Sbjct: 287 KAAPYFAFVGNLPFKDGGKLTTAGNERVLRARFADARHFW-------------------- 326 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRA 414 +LD L R+ L V FHA++GTQ ER RI L +AQ L A +A +RA Sbjct: 327 DLDRKTKLADRVPALAA--VTFHAELGTQAERAERISKLAGTVAQAMGLDGAQIAQAERA 384 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+KADL T +V EFPELQG +G YAV E+ + A+ EH PRG ++ +S Sbjct: 385 GLLAKADLTTGMVGEFPELQGVMGGYYAVHDGEDEAVSRAVAEHYLPRGQSDDTAKAPVS 444 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-FIEDQN 533 + V+LAD+LD L F+AI E PSGS DPYALRRA LGIIR I +N + + LS+ F + N Sbjct: 445 VAVALADRLDLLAGFFAIGELPSGSGDPYALRRAALGIIRTIRDNGLRLDLSELFAQAAN 504 Query: 534 ---------LILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFSS 583 L F +RL++ L RHD++ A L D +L+ ++ L+E + Sbjct: 505 GRTGGELAKLPDFIAERLRVQLRSEGERHDVLAATLAGGLDGDLVRLLARTSALSEMIQT 564 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 G L +AKR IL IE+KK+ + P + E+ L + I+ ++ Sbjct: 565 EDGRNLLAAAKRAANILRIEDKKDGPHTGAPDPALYTQDEERALATGLDQAVPAIETALK 624 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +R+ + ++ ++ FF+ V VN + EVR NRL LL + ++ + +I Sbjct: 625 EERFTDAMQAIAALRPTLDRFFEAVTVNTPEPEVRANRLKLLSCFRETTALIADFGQI 682 >gi|261320734|ref|ZP_05959931.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] gi|265994363|ref|ZP_06106920.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|261293424|gb|EEX96920.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] gi|262765476|gb|EEZ11265.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 505 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 215/505 (42%), Positives = 289/505 (57%), Gaps = 75/505 (14%) Query: 272 LCLPEELIRLTIKTNQKCFVTRTREG----------------VLANCFILVSNIQASDGG 315 + +P E+IRLTI+ NQKCFVTR ++G L+N FILVSN+ A DGG Sbjct: 1 MAIPPEVIRLTIRANQKCFVTR-KQGDASRLASPAPQHEEIQALSNKFILVSNVAARDGG 59 Query: 316 AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDML 375 I GN +VV ARL DAL+FW DQ++LP+L L SA KF LDL KPLDQRMARLD L Sbjct: 60 TEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLDLKKPLDQRMARLDAL 119 Query: 376 DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQG 435 +V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KADL TE+V EFPELQG Sbjct: 120 NVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKADLQTEVVGEFPELQG 179 Query: 436 KIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEK 495 +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LADKLDTL+ FWAI+EK Sbjct: 180 AMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALADKLDTLVGFWAIDEK 239 Query: 496 PSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFI-----EDQNLILFFHDRL--- 542 P+GSKDPYALRRA LG+IR++L + PL S F + Q + F +L Sbjct: 240 PTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQMQRKLREFEAKLAAE 299 Query: 543 -------------KLYLHDRDIR------------------HDLIEAILRPEN------- 564 L ++++IR HD + L+ E Sbjct: 300 NSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRFKVHLKEEGARYDAID 359 Query: 565 -------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ 617 DNLL + ++ L F + G+ L AKR ILA EEKK +++ + P Sbjct: 360 AVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAAEEKKGTKVADRVDPA 419 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 L EK L+ ++ + E++ + ++ L + P++IFFD+VLVN +D V Sbjct: 420 LLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVDIFFDKVLVNDEDGNV 479 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R NRL+LL I+ V + KI Sbjct: 480 RANRLALLDQIRAATGKVADFSKIA 504 >gi|315500103|ref|YP_004088906.1| glycyl-tRNA synthetase, beta subunit [Asticcacaulis excentricus CB 48] gi|315418115|gb|ADU14755.1| glycyl-tRNA synthetase, beta subunit [Asticcacaulis excentricus CB 48] Length = 759 Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 216/557 (38%), Positives = 319/557 (57%), Gaps = 43/557 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L+E++SEEIPARMQ +AA D + K +G+I+ +++ Y P RL L+++GL Sbjct: 1 MAQLLIELFSEEIPARMQLQAARDFERLFGDRAKAQGLIWHSLKAYVGPRRLALHVEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EE GP+ GA ++A+ GFLR GL D + ++ V++A + KP + Sbjct: 61 LEQAAVTEEVKGPKDGAPEQAMAGFLRKVGL--TQDQLVLEN----GVWMARIEKPAKRT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL I+ I PWPKSMR T S+F W+RPLK IL + K+I L + Sbjct: 115 AEVLPGILEDVILTFPWPKSMRSGT-----SSFRWVRPLKRILFLF-----DGKVIPLSV 164 Query: 181 KEIPCGNITYGHR-FHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + G++T GHR + V+ Y L + V+LD R++ IL+ A+ +A Sbjct: 165 GGVTSGDLTQGHRVLSSLEAFAVKDFADYQLKLRDNFVILDHIERQSLILDKANEACAAA 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGV 298 G L++D LLEE+ GL EW +G D K+L LP E+I+ +++T+QK F R G Sbjct: 225 GCALMDDPGLLEEVAGLNEWPTPLLGDMDPKFLSLPPEVIKTSMRTHQKYFAVRDLSTGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 +A FI+V+N A+DGGA I +GN++V++ARL D + FW D K N Sbjct: 285 MAAKFIIVANQVANDGGAEIRRGNAKVLSARLSDGVFFWSEDNR-------------KGN 331 Query: 359 LDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 D A L L+ V +HAK+GT +RV+RI L + IA L+ ADV+L A L Sbjct: 332 FD---------AWLQKLNGVTYHAKLGTMAQRVARIEALAEVIAPLVKADVSLAKSAAHL 382 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL + +V EFPELQG +G YA +AI EH KP+GP ++VP + V Sbjct: 383 AKADLASYMVGEFPELQGVMGGYYAEAARLPGDVAEAIREHYKPQGPSDSVPEGAVPAAV 442 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--QNLI 535 +LADK+DTL+ F+AI+EKP+GSKDPYALRRA LGI+RI+ ++ + LS+ + Q+L+ Sbjct: 443 ALADKIDTLVGFFAIDEKPTGSKDPYALRRAALGILRILRQHNVRASLSELVAAWYQSLL 502 Query: 536 LFFHDRLKLYLHDRDIR 552 ++ + +Y+ + R Sbjct: 503 IYAGEGRAVYVDTDNWR 519 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 66/144 (45%) Query: 537 FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 FF DRLK+ L D +R D++EA ++D+++ V IK L ++ G + + R Sbjct: 594 FFADRLKVMLKDEGVRFDVVEAGFALKDDDMVRTVGRIKALESVLATPAGTELQAAYTRF 653 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL E KK + E E E L + ++ +D +++ + D L Sbjct: 654 ANILNAEAKKGALPTAEPKLLSGAPEVETALTQQVIALTPVLERLIDAEQFEEALDKLAG 713 Query: 657 ICEPIEIFFDQVLVNVDDREVRDN 680 + ++ F D VLVN D R+N Sbjct: 714 LHGAVDAFLDGVLVNSDVAAEREN 737 >gi|294085843|ref|YP_003552603.1| glycyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665418|gb|ADE40519.1| Glycyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 703 Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 240/731 (32%), Positives = 382/731 (52%), Gaps = 60/731 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQY----WTPHRLFLYL 56 M D +E+ SE+IPARMQ KA DL ++ L + G+ Y + L LY+ Sbjct: 1 MADLFIELVSEDIPARMQVKACADLQRLVYAGLDDLGLGYTKADDTDACLVSSRHLALYV 60 Query: 57 KGLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 G+ ++I E+ GPRV A ++AI+GFL STGL D +++D KG A Sbjct: 61 VGVDDRQADRIVEKRGPRVDAPEQAINGFLASTGL--TRDQLVEEDTPKGRFLFARSESK 118 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE--DAKEK 174 D+L +++ + PWPKS RW T S F W+RPL I + + D Sbjct: 119 GAQTADLLASMIAGILNSFPWPKSQRWGT-----SRFRWVRPLHRINVLFGGKRLDGALA 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDH---YIRDLEEAMVLLDPECRRNAILND 231 + D I G+ + GH F +P + + L + Y+ L++A VL++ R +++ Sbjct: 174 LGGDDDAAIAFGDKSCGHFFESPGDVDLDGLKNAQDYLGRLKKAHVLVNHNERIQTVMDQ 233 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A +LA+ +G + + E LVEW + +G + +++ LP E+++ +I+T+QK ++ Sbjct: 234 ARKLAADMGCSVKSGDAQIAETANLVEWPNLLVGKIEDRFMQLPAEVLQSSIQTHQK-YI 292 Query: 292 T--RTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLS 348 T +G ++ FI+V+N A +++ GN RV+ ARL DA FW +D+ Sbjct: 293 TLEHISDGSMSPHFIIVANRIADHVRDDVIKAGNQRVLRARLADAEFFWTQDK------- 345 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-D 407 ++ L+ + +L D+ F+ +G+ ++ RI L IA ID D Sbjct: 346 -------------ARTLEDYLPQL--TDITFYDGLGSVHDKARRIEKLAGDIAPFIDGCD 390 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 +A RA +L+KADL T +V EFPELQG +G YA+ E+ A+ H +P+GP + Sbjct: 391 LAKAQRAGLLAKADLVTGMVGEFPELQGIMGGYYAIAAGEDDDIAAAVASHYRPQGPQDA 450 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 VP ++TVSLADK+DTL+ F+ KP+GSKDPYALRRA LG+I IILE+ IPL++ Sbjct: 451 VPALPEAMTVSLADKIDTLVGFFGAGAKPTGSKDPYALRRAALGVIAIILESHTRIPLAK 510 Query: 528 FIE-----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIK 575 D L+ F +RL++ L D+++ HD+ ++L+ D++L + D Sbjct: 511 IFAKAAAYHGFDHVDDALLPFLRERLRVSLLDQNVAHDVAASVLQTATTDDVLLLADTAH 570 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVISDF 634 L F ++ G L +R ILA EE K++R + I P + +AE+ L + I Sbjct: 571 ALAIFLATEDGVGLLAGWRRAASILAAEESKEDRVFAPTIDPNLFVHDAERGLMSAIDIL 630 Query: 635 GTHIQESM----DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 G+H + D + Q L + PI+ FF +V+VN DD +R+NRL LL I++ Sbjct: 631 GSHDADEQTEIPDKAQLLQQMQALGQLRTPIDHFFTEVVVNDDDPAIRENRLGLLALIRS 690 Query: 691 IILIVINVQKI 701 + + + KI Sbjct: 691 HMQNIADFSKI 701 >gi|326404580|ref|YP_004284662.1| glycyl-tRNA synthetase beta subunit [Acidiphilium multivorum AIU301] gi|325051442|dbj|BAJ81780.1| glycyl-tRNA synthetase beta subunit [Acidiphilium multivorum AIU301] Length = 666 Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 234/689 (33%), Positives = 348/689 (50%), Gaps = 63/689 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F LE++SEEIPARMQ AAE L+ ++ L + ++++ + R+ + + + Sbjct: 1 MAEFFLELFSEEIPARMQEAAAEQLAKLVGAQLAP--LSPRDIKAFGAARRIAV-VATID 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PKRL 119 PE E GP++ A +A++GFLR G +++ + D Y + R P R Sbjct: 58 AEVPESASEVRGPKLSAPPQALEGFLRKNG-------AAREELVEEDGYFLLRRNLPSRP 110 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 +++ A+ WPKSMRW + AF+W+RPL+ ++C+L +I Sbjct: 111 AGELIAGEFAQALAGFGWPKSMRWGQS----GAFTWVRPLRRVVCLL-----DGAVIPFT 161 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 L + G+ + GHRF AP +V S + +L V++D + RR I A A Sbjct: 162 LGPVASGDQSEGHRFLAPGAFRVTSAAQWQEELRARRVIVDADERRKTIAEGLRAAAGAK 221 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 GL + D LL+E+ GLVEW +G+ D + LP E+ L++K NQ+ F TR G Sbjct: 222 GLSVAGDAGLLDEVAGLVEWPVCLIGAIDPGQMALPPEVRELSMKVNQRYFATRDAAGNP 281 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F V+NI A+DGGAAI+ GN RV+ ARL DA HFW +D+ Sbjct: 282 APYFAFVANIAANDGGAAIIAGNERVLRARLADAEHFWAQDRK----------------- 324 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVALVDRAIV 416 + LD + +LD V FHAK+GTQ R RI L ++I A RA Sbjct: 325 ---QTLDSWLPKLDA--VTFHAKLGTQHARAGRIEALAREIALALGADAAAADAAARAGR 379 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L KADL + +V EFPELQG +G YA E + AI H +P+GP + VP+ +S Sbjct: 380 LCKADLVSGMVGEFPELQGIMGGYYAEASGEGDAIAGAIRTHYQPKGPSDEVPSGVVSAA 439 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL 536 V+LADK+DTL F+ I E P+GS DP+ALRRA LG+IRI+LEN + + L + + Sbjct: 440 VALADKIDTLREFFRIGETPTGSGDPFALRRAALGVIRIVLENGLRLNLMPLV-GAEVFD 498 Query: 537 FFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 F +RL++ L R D++ A+L +D+L ++ + L F +S G L + +R Sbjct: 499 FLIERLRVKLRGEGKRFDVLNAVLDTARDDDLTRLIARTEALGAFLASEDGANLLAAYRR 558 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD--- 652 IL IE+ K+ I P L AE L E++D + ++ D Sbjct: 559 STNILRIEDAKDGPHEGTIDPGLLAEAAEIAL--------ADALEAVDREAVRRLADEDF 610 Query: 653 -----LLHSICEPIEIFFDQVLVNVDDRE 676 ++ P++ FFD V VN E Sbjct: 611 AGAMRGFAALRAPVDAFFDHVTVNATGAE 639 >gi|209542755|ref|YP_002274984.1| glycyl-tRNA synthetase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|209530432|gb|ACI50369.1| glycyl-tRNA synthetase, beta subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 686 Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 249/722 (34%), Positives = 371/722 (51%), Gaps = 59/722 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHR--LFLYLKG 58 MP+ LLE++SEEIPARMQ +AAEDL ++ L + ++ R + P R L L L G Sbjct: 1 MPELLLELFSEEIPARMQARAAEDLVRLVTDALAP--LNPRDARGFSGPRRIALTLTLDG 58 Query: 59 LSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PK 117 + P + + ER GPR GA +KA+ GF R G+ T +D ++ D + + R P Sbjct: 59 VVPGT--TVAER-GPREGAPEKALAGFTRKHGV-TPADLVLE------DGFWVLNRTVPP 108 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +P +++ PWPKSMRW S F+W+RPL+ ILC+L E + D Sbjct: 109 VEAATRIAEALPPLLRRFPWPKSMRWGEG----SGFTWVRPLRRILCLLDGETVAFSLAD 164 Query: 178 L--DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 D + +T GHRF AP V + L VL+D RR I RL Sbjct: 165 GEDDGHGLRADRLTEGHRFTAPGAFAVTDAAAWRDGLRARQVLVDAAERRALIEEGTTRL 224 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ GL +V D L++E+ GL EW F+G D+ ++ LP E+++++++ NQ+ F Sbjct: 225 AAEEGLRIVPDPGLVDEVAGLTEWPVPFLGRIDETFMDLPREVMQVSMRVNQRYFALIND 284 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G A F V+N+ DGGA + GN RV+ AR DA HFW Sbjct: 285 DGSAAPRFAFVANLLPEDGGALTIAGNERVLRARFADARHFW------------------ 326 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +LD ++ L R+ LD + FHA +G+QG RV RI L +A ++ AD A +RA Sbjct: 327 --DLDRARTLASRVGALDA--ITFHAALGSQGARVQRIVRLAGLLAPMVGADPAQAERAA 382 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL T +V EFPELQG +G YA E AI EH PRG + VP +SI Sbjct: 383 LLAKADLTTGMVGEFPELQGVMGAYYARHDGEADPVATAIAEHYMPRGQNDGVPAAPVSI 442 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 V+LADK+D+L F+A EKP GS DPYALRRA LG+IRII EN + + L + Sbjct: 443 AVALADKIDSLAAFFAAGEKPGGSGDPYALRRAALGVIRIIRENALRLDLVKLFVLAAEA 502 Query: 530 ------EDQNLIL---FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT-IVDLIKHLNE 579 + +L L F +RL++ L RHD++ AI D+ +T ++ L Sbjct: 503 LPETLRDAPDLALLPGFVAERLRVQLRAEGARHDILAAISSGNEDSDITRLLARTDALAA 562 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ G+ L + +R IL IE++K+ P E+ L + D ++ Sbjct: 563 MLATDDGQNLLAATRRAANILRIEDRKDGPHDGAPDPTLYEQPEERELANALLDVIPAVE 622 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ +R+ + ++ FFD V VN D ++R NRL LL ++ + +++ + Sbjct: 623 TTIAAERFEDAMRDAARLRPVLDRFFDAVTVNADRADLRANRLRLLAELRRMTVLIADFS 682 Query: 700 KI 701 +I Sbjct: 683 QI 684 >gi|162148115|ref|YP_001602576.1| glycyl-tRNA synthetase beta chain (glycine--tRNA ligas beta chain) (glyrs) [Gluconacetobacter diazotrophicus PAl 5] gi|161786692|emb|CAP56275.1| glycyl-trna synthetase beta chain (glycine--trna ligas beta chain) (glyrs) [Gluconacetobacter diazotrophicus PAl 5] Length = 684 Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 249/722 (34%), Positives = 371/722 (51%), Gaps = 59/722 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHR--LFLYLKG 58 MP+ LLE++SEEIPARMQ +AAEDL ++ L + ++ R + P R L L L G Sbjct: 1 MPELLLELFSEEIPARMQARAAEDLVRLVTDALAP--LNPRDARGFSGPRRIALTLTLDG 58 Query: 59 LSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PK 117 + P + + ER GPR GA +KA+ GF R G+ T +D ++ D + + R P Sbjct: 59 VVPGT--TVAER-GPREGAPEKALAGFTRKHGV-TPADLVLE------DGFWVLNRTVPP 108 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +P +++ PWPKSMRW S F+W+RPL+ ILC+L E + D Sbjct: 109 VEAATRIAEALPPLLRRFPWPKSMRWGEG----SGFTWVRPLRRILCLLDGETVAFSLAD 164 Query: 178 L--DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 D + +T GHRF AP V + L VL+D RR I RL Sbjct: 165 GEDDGHGLRADRLTEGHRFTAPGAFAVTDAAAWRDGLRARQVLVDAAERRALIEEGTTRL 224 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ GL +V D L++E+ GL EW F+G D+ ++ LP E+++++++ NQ+ F Sbjct: 225 AAEEGLRIVPDPGLVDEVAGLTEWPVPFLGRIDETFMDLPREVMQVSMRVNQRYFALIND 284 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G A F V+N+ DGGA + GN RV+ AR DA HFW Sbjct: 285 DGSAAPRFAFVANLLPEDGGALTIAGNERVLRARFADARHFW------------------ 326 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +LD ++ L R+ LD + FHA +G+QG RV RI L +A ++ AD A +RA Sbjct: 327 --DLDRARTLASRVGALDA--ITFHAALGSQGARVQRIVRLAGLLAPMVGADPAQAERAA 382 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL T +V EFPELQG +G YA E AI EH PRG + VP +SI Sbjct: 383 LLAKADLTTGMVGEFPELQGVMGAYYARHDGEADPVATAIAEHYMPRGQNDGVPAAPVSI 442 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 V+LADK+D+L F+A EKP GS DPYALRRA LG+IRII EN + + L + Sbjct: 443 AVALADKIDSLAAFFAAGEKPGGSGDPYALRRAALGVIRIIRENALRLDLVKLFVLAAEA 502 Query: 530 ------EDQNLIL---FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT-IVDLIKHLNE 579 + +L L F +RL++ L RHD++ AI D+ +T ++ L Sbjct: 503 LPETLRDAPDLALLPGFVAERLRVQLRAEGARHDILAAISSGNEDSDITRLLARTDALAA 562 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ G+ L + +R IL IE++K+ P E+ L + D ++ Sbjct: 563 MLATDDGQNLLAATRRAANILRIEDRKDGPHDGAPDPTLYEQPEERELANALLDVIPAVE 622 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ +R+ + ++ FFD V VN D ++R NRL LL ++ + +++ + Sbjct: 623 TTIAAERFEDAMRDAARLRPVLDRFFDAVTVNADRADLRANRLRLLAELRRMTVLIADFS 682 Query: 700 KI 701 +I Sbjct: 683 QI 684 >gi|148261175|ref|YP_001235302.1| glycine--tRNA ligase [Acidiphilium cryptum JF-5] gi|146402856|gb|ABQ31383.1| glycyl-tRNA synthetase beta chain [Acidiphilium cryptum JF-5] Length = 723 Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 237/745 (31%), Positives = 354/745 (47%), Gaps = 118/745 (15%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F LE++SEEIPARMQ AAE L+ ++ L + ++++ + R+ + + + Sbjct: 1 MAEFFLELFSEEIPARMQEAAAEQLAKLVGAQLAP--LSPRDIKAFGAARRIAV-VATID 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PKRL 119 PE E GP++ A +A++GFLR G +++ + D Y + R P R Sbjct: 58 AEVPESASELRGPKLAAPPQALEGFLRKNG-------AAREELVEEDGYFLLRRNLPSRP 110 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 +++ A+ WPKSMRW + AF+W+RPL+ ++C+L E ++ Sbjct: 111 AGELIAGEFAQALAGFGWPKSMRWGQS----GAFTWVRPLRRVVCLLDGE-----VVPFT 161 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 L + G+ + GHRF AP +V S + +L V++D + RR I A Sbjct: 162 LGPVASGDESEGHRFLAPGAFRVSSAAQWREELRARFVIVDADERRERIRAGLRAAAGDK 221 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 GL + D LL+E+ GLVEW +G+ D + LP E+ L++K NQ+ F TR G Sbjct: 222 GLGVAGDAGLLDEVAGLVEWPVCLIGAIDPGQMALPPEVRELSMKVNQRYFATRDAAGTP 281 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F V+NI A+DGGAAI+ GN RV+ ARL DA HFW +D+ Sbjct: 282 APYFAFVANIAANDGGAAIIAGNERVLRARLADAEHFWAQDRK----------------- 324 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVALVDRAIV 416 + L+ + +LD V FHAK+GTQ R RI L ++I A RA Sbjct: 325 ---QTLESWLPKLDA--VTFHAKLGTQHARAGRIEALAREIALALGADAAAADAAARAGR 379 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L KADL + +V EFPELQG +G YA E + AI H +P+GP + VP+ +S Sbjct: 380 LCKADLVSGMVGEFPELQGIMGGYYAEASGEGDAIAGAIRTHYQPKGPSDEVPSGVVSAA 439 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ--------- 527 V+LADK+DTL F+ I EKP+GS DPYALRRA LG+IRI+L N+ +PL Q Sbjct: 440 VALADKIDTLAGFFVIGEKPTGSGDPYALRRAALGVIRIVLVNRFALPLRQILDVAVERI 499 Query: 528 -----------------FIEDQNLIL------------------------------FFHD 540 + + QN+ + F D Sbjct: 500 SESIFAAAEETTDKAIAYAQSQNVPVGARARFFARVTVLDPASGKQINSRVPEIFDFIID 559 Query: 541 RLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 RL++ L R D++ A+L +D+L ++ + L F ++ G L + +R I Sbjct: 560 RLRVLLRSEGKRFDVLNAVLDTARDDDLTRLIARTEALGAFLATEDGANLLAAYRRSTNI 619 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD------- 652 L IE+ K+ I P L AE L E++D + ++ D Sbjct: 620 LRIEDAKDGPHEGTIDPGLLAEAAEIAL--------ADALEAVDREAVRRLADEDFAGAM 671 Query: 653 -LLHSICEPIEIFFDQVLVNVDDRE 676 ++ P++ FFD V VN E Sbjct: 672 RGFAALRAPVDAFFDHVTVNATGAE 696 >gi|218516038|ref|ZP_03512878.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli 8C-3] Length = 334 Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 166/332 (50%), Positives = 230/332 (69%) Query: 370 ARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVRE 429 A+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL DRA VL+KADL TE V E Sbjct: 1 AKLDALDVTFHAKLGTQGARVARIRALAKELAAITGADPALTDRAAVLAKADLRTEAVGE 60 Query: 430 FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINF 489 FPELQG +G++YAVLQ EN S A+E+H KP+GP + VP +K++IT++LADKLDTL F Sbjct: 61 FPELQGLMGRKYAVLQGENASVAAAVEDHYKPQGPSDRVPEDKVAITLALADKLDTLTGF 120 Query: 490 WAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDR 549 WAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL D +L+ FFHDRLK+YL D+ Sbjct: 121 WAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATTRDGDLLSFFHDRLKVYLRDQ 180 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 R+DLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+LA EEKK Sbjct: 181 GARYDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQLLAAEEKKGTV 240 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I+ +SP L L+AEK L+A IS +++ + + + L + P++ FF++VL Sbjct: 241 IADGVSPALLKLDAEKELFAAISSASKDAADAVAGEDFRSAMEALSKLRGPVDRFFEEVL 300 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN +D +R NRL+LL+ I+ V + KI Sbjct: 301 VNDEDAAIRANRLALLRLIREATGTVADFSKI 332 >gi|254696833|ref|ZP_05158661.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260761227|ref|ZP_05873570.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260671659|gb|EEX58480.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] Length = 487 Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 199/463 (42%), Positives = 267/463 (57%), Gaps = 58/463 (12%) Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF Sbjct: 24 ALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKF 83 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL Sbjct: 84 GLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVL 143 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V Sbjct: 144 AKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAV 203 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----SQFI--- 529 +LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL S F Sbjct: 204 ALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQ 263 Query: 530 --EDQNLILFFHDRL----------------KLYLHDRDIR------------------H 553 + Q + F +L L ++++IR H Sbjct: 264 EGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFH 323 Query: 554 DLIEAILRPEN--------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 D + L+ E DNLL + ++ L F + G+ L AKR I Sbjct: 324 DRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANI 383 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK +++ + P L EK L+ ++ + E++ + ++ L + Sbjct: 384 LAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRG 443 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 444 PVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 486 >gi|254491151|ref|ZP_05104332.1| glycyl-tRNA synthetase, beta subunit [Methylophaga thiooxidans DMS010] gi|224463664|gb|EEF79932.1| glycyl-tRNA synthetase, beta subunit [Methylophaga thiooxydans DMS010] Length = 692 Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 233/720 (32%), Positives = 360/720 (50%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + ++ + K+ + +R Y TP RL L + L Sbjct: 6 DLLIELGTEELPPKALATLSKAFHQGVEQGFKKAELQCDEIRPYATPRRLALVITKLQTR 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ ER GP V G KA+ GF +S G+ +K D KG + ++ Sbjct: 66 QQDRTIERRGPAVTSAFDEDGNPTKALMGFAKSCGVDVDDLETMKTD--KGAWLVFKQQQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L I+ A+ ++P PK MRW ++RP+ L +L +D + Sbjct: 124 EGADTASLLPDIIQQALNELPIPKRMRWGDLPG-----EFVRPVH-WLVVLFGDD----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 + +DL + G ++ GHRFH P PI++ S Y LE E VL+D + R+ I + Sbjct: 174 VPVDLLGVSAGRMSRGHRFHNPQPIEIGSAMTYAPQLESEGHVLVDYDARKQIINTQVNE 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA +G E V + DLLEE+ GLVEW G+FD+++L LP E + +++ +QK F R Sbjct: 234 LAEKLGGEAVINPDLLEEVTGLVEWPVALAGNFDERFLELPAEALISSMEGHQKYFAVRA 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI AS A +V GN RV+ RL DA FW D+ Sbjct: 294 KNSDLLPHFITVSNI-ASQDPAQVVAGNERVILPRLSDAAFFWDTDRK------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L +VF K+GT ++ R+ L +IAQ I D AL +RA Sbjct: 341 --------QPLAARQEQLK--SIVFQNKLGTVYDKSQRVAKLAAEIAQHIRGDEALAERA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL TE+V EFP+LQG +G+ YA L EN +A++E PR + +P Sbjct: 391 AMLAKCDLVTEMVGEFPDLQGIMGRYYARLDGENNDVAEALDEQYLPRFAGDQLPVTPTG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 VSLA+KLDTL + I + P+G KDP+ALRRA LG++RII+EN++D+ L+ ++ Sbjct: 451 QAVSLAEKLDTLTGLFGIGQPPTGVKDPFALRRAALGVLRIIIENELDLDLASLVDFAAD 510 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ +F+DRL+ Y D+ + D EA+L + L + +K + Sbjct: 511 TCGDTLTEKSVTSQVMQYFYDRLRGYALDQGFKADEFEAVLAVKPSRPLDFMQRLKAVAA 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDFGTHI 638 F + + KRI IL E + ++++ + LL E AEK L ++ + Sbjct: 571 FRQLEQADSLAAGNKRIGNILRKNEAEAEGMTIDDA---LLQESAEKDLAEKLAQASQDL 627 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + + L + E I+ FFDQV+V DD VR NRL++L + + L V ++ Sbjct: 628 APLSAKSDYAGVLNYLAGMRETIDAFFDQVMVMADDEAVRQNRLAILNQTRALFLGVADI 687 >gi|269468521|gb|EEZ80175.1| glycyl-tRNA synthetase, beta subunit [uncultured SUP05 cluster bacterium] Length = 678 Score = 339 bits (870), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 222/714 (31%), Positives = 375/714 (52%), Gaps = 63/714 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+P ++ K + L+ L L E + + + + TP RL + ++ L Sbjct: 5 DFLLELGTEELPPKLLQKISNALTTNLTDQLSELKLSFGKVESFATPRRLAVLVRDLQLQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGL--QTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ ER GP + A +A++GF +S G+ Q +S K K D Y + Sbjct: 65 QDDQTVERKGPALSAPDQAVEGFAKSCGVSKQDLS----HKAFGKADYYFFTKEQKGLKT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L+ +V AI+K+P K MRW F+++RP ++ +L +E I+ + Sbjct: 121 TDLLEDVVDTAIKKIPIAKPMRWGNLD-----FTFVRPTHWLVMMLGSE-----IVPATV 170 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAV 239 + GN T G RF + + Y + L + A + +D + R+ I ++AS Sbjct: 171 MGLSAGNTTKGLRFTGEQEFGIDNAADYQQTLFDRAQIEVDFDARKQIIRKQVMQVASKS 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 V D+ LL+E+ LVE+ F G FD+K+L +PEE + +K++QK F L Sbjct: 231 KANAVIDESLLDEVCALVEYPCAFSGGFDQKFLSVPEEALISAMKSHQKYFHMVDDNEKL 290 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 FI V+NI++SD + I+ GN RV+ RL D+ FW++D+ Sbjct: 291 LPSFISVANIESSDL-SVIIDGNERVIRPRLSDSEFFWEKDK------------------ 331 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 ++ L+ R+++L+ DV+F +G+ G++V RI L IA +I A+V RA +LSK Sbjct: 332 --TESLESRLSKLN--DVLFMKLLGSMGDKVKRIESLSSYIAGVIGANVDYSARAGLLSK 387 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 +DL +++V EF +LQG +G YA+ E+ S AI EH PR +++P+++ + V++ Sbjct: 388 SDLVSDMVGEFADLQGVMGGYYALNDGEDESVSIAIREHYHPRFSGDSLPSSREGLVVAI 447 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--- 536 ADKLDT+ + I + P+GSKDPYALRR LG++RI++E ++++ L I Q+L L Sbjct: 448 ADKLDTITGIYGIGQGPTGSKDPYALRRMALGLLRIMVEGQLNLDLKALIA-QSLSLHSS 506 Query: 537 ------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 F DRL+ Y ++ + EA+L ++ ++ LN F + Sbjct: 507 KVDASSADDIYQFMMDRLRAYYKEQKVSAKAFEAVLAVRPESPYDFHRRVEALNLFTQQS 566 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + E + S KRI IL K++ + ++ + +AEK LY +S+ + S D Sbjct: 567 ESESLIESNKRIANIL----KEHDNLGTDVDTSVFVEDAEKALYEAVSNVAKDLSLSAD- 621 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y Q + L + + I+ FFDQV+VN DD ++ +RL+LL +++++ L V ++ Sbjct: 622 --YEQTMNKLLGLKDSIDSFFDQVMVNTDDEILKRSRLTLLNWVRSLFLSVADI 673 >gi|319940873|ref|ZP_08015212.1| glycine tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319805755|gb|EFW02536.1| glycine tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 701 Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 224/727 (30%), Positives = 373/727 (51%), Gaps = 57/727 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG 58 M + L+E+ +EE+P + K +E + + L + + + Y P RL +++ Sbjct: 6 MTNLLVELQTEELPPKALRKLSEAFAEGVCKSLADAHFLADSSVTTAYGAPRRLAVHITD 65 Query: 59 LSPHSP-EKIEERLGP---RVGAGKKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVYL 110 + SP E ++L P +GA +A ++ + G+ ++D + D K +Y Sbjct: 66 VLAKSPDETFRQKLVPVKVGIGADGQATPALVKKMAALGINCAVTDLERVDDGKNEQLYY 125 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 +R+ L L+ + A++ +P PK M + ++ S++RP++ + +L E Sbjct: 126 EGVRQGVELASG-LQHALEYAVKHLPIPKVMTYQLADG-VTTVSFVRPVRHLTALLGTE- 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+ ++L + G +T GHRFH PI +++ D Y+ ++ A V+ + RR I Sbjct: 183 ----IVPVELFGLKSGRLTRGHRFHTSEPIAIENADSYVEQMKAAFVMPCYDERRAVIEA 238 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + R A+A+ E + +DLLEE+ L EW ++ F+ ++L +P+E + LT++ NQK F Sbjct: 239 ELKRRAAALDAEAIMPEDLLEEVTALTEWPVIYESQFESEFLAVPQECLILTMQLNQKYF 298 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 R G L N F+LVS + A DGG AI +GN+RVV ARL DA F+ DQ+ + L S Sbjct: 299 ALEDRSGKLMNRFLLVSQLIAKDGGKAISEGNARVVRARLADAKFFY--DQDRMHTLESR 356 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 E + VV+H K+G+Q ER+ R+R + A L+ A+ Sbjct: 357 VEG--------------------LRHVVYHNKLGSQYERMLRVRRIAAAAAALLGANKTE 396 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DRA +L+KADL T +V EFPELQG +G+ YA E AI EH +PR + +P+ Sbjct: 397 ADRAAMLAKADLRTLMVGEFPELQGIMGEYYAENDKEPKDVALAIREHYQPRYAGDALPS 456 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S+ V+LADKL+TLI + I + P+G KDP+ALRR LG++R+++E ++D+ L I+ Sbjct: 457 TSVSLAVALADKLETLIGLFGIGQLPTGEKDPFALRRHALGVLRMLIEKELDVSLPALID 516 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 Q L+ FF DRL++ L +R +A+L D L I I Sbjct: 517 AAWEAEKDVAGVVDNRQELLTFFADRLRVMLRERGATAQEADAVLAKRLDKLADIPKRIG 576 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + E + KRI IL +K E+S +I P L AEK L+ + Sbjct: 577 AVRAFMDLPEAEALTAANKRIGNIL---KKVEGEVSEKIDPALLQEAAEKNLFEELRAVE 633 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + R+ + + ++ P++ FF+ V+VN +D +R NRL+LL+ + ++ V Sbjct: 634 PAAEALYAEGRFEDMLVTIAALRSPVDAFFETVMVNAEDPALRANRLALLKRLYGVMNAV 693 Query: 696 INVQKIV 702 + ++ Sbjct: 694 AEISRLA 700 >gi|310659074|ref|YP_003936795.1| glycine tRNA synthetase subunit beta [Clostridium sticklandii DSM 519] gi|308825852|emb|CBH21890.1| glycine tRNA synthetase, beta subunit [Clostridium sticklandii] Length = 687 Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 230/724 (31%), Positives = 370/724 (51%), Gaps = 70/724 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI +EEIPAR K D+ L LKE + Y+++ TP R + + L+ + Sbjct: 6 LFEIGTEEIPARFIAKTKADMKGYLEKTLKELHIEYKSIELKCTPRRFVVVIDELAENQA 65 Query: 65 EKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKP 116 EE GP KA+ GFL+ + IS ++ D Y + L K Sbjct: 66 TVEEELKGPAKKIAFDENNNPSKALLGFLKG---KDISPEEVYFKTVGKDEYAHIKLTKE 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++ +LK I I+ +PKSMRW + ++RP++ +C++ E++I Sbjct: 123 GQAVKGLLKDIFEGMIKSTTFPKSMRWGGKN-----IRFVRPIRYFVCLM-----DEEVI 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I GNIT GHRF I + + D Y L+E V+LD E R++ IL +A Sbjct: 173 DFEIEGIKTGNITKGHRFLGSSEIVINTPDEYEAKLKENFVILDDEQRKSLILEQCKAVA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++G L+ D+DLLEE+ +VE+ F G FD+ YL LP+E I +K +Q+ F + Sbjct: 233 DSLGGTLMMDEDLLEEVNYIVEYPTAFYGEFDESYLSLPKEAIITPMKEHQRYFPVLDAD 292 Query: 297 GVLANCFILVSNIQASDGGA--AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N D A + +GN +V+ ARL DAL F+ D Sbjct: 293 GKLLNKFITVRN---GDSYAIDNVKRGNEKVLDARLSDALFFYHEDT------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 KPL+ + RLD +VF K+GT ++ RI+ L +KIA+ + + +DRA Sbjct: 337 -------KKPLEAYVERLDT--IVFQQKLGTILDKTKRIQNLSEKIAKALALTLPNLDRA 387 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSKADL T +V EF ELQG +G+ YA L NE +AI EH PR + +P+ Sbjct: 388 AYLSKADLTTAMVFEFTELQGIMGRYYANLSNEPSEVAEAIYEHYLPRFAGDELPSTNEG 447 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 I ++L+D+LD++ F+AI +P+GS+DPYALRR LGI+ I++E K+D+ L ++ Sbjct: 448 IILALSDRLDSVAGFFAIGIQPTGSQDPYALRRQALGILNIMMEKKLDVRLFDLLDLALE 507 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +L+ FF RLK D IR+D+++AI+ E+ N ++ K L+ Sbjct: 508 NFDFEDMDKQSVKSDLMSFFELRLKNLFTDMGIRYDVVDAIINIEDSNPFDLLIRAKDLD 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 + + + L + RI I ++ ++ ++E +L + + Sbjct: 568 AWVKNNSVTEALQTFSRISNI------SKEAVAGKVDEALFAHDSEAKLNTAYNSIKAEV 621 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + + Y + +LL SI + ++ FFD V++ ++ ++R NRL++L I+ + V ++ Sbjct: 622 EAMLARREYVKALELLISIKDSVDAFFDSVMIMDENMDIRANRLAMLSNIRTTMESVADL 681 Query: 699 QKIV 702 KIV Sbjct: 682 SKIV 685 >gi|289423934|ref|ZP_06425727.1| glycyl-tRNA synthetase, beta subunit [Peptostreptococcus anaerobius 653-L] gi|289155711|gb|EFD04383.1| glycyl-tRNA synthetase, beta subunit [Peptostreptococcus anaerobius 653-L] Length = 687 Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 225/727 (30%), Positives = 376/727 (51%), Gaps = 67/727 (9%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R + L L L+E+ V ++++ + TP RL L +KGL Sbjct: 1 MNNYLLYEIGVEEMPSRFVQSTLDQLVSGLKSRLEEKRVAFEDIDTFATPRRLILVVKGL 60 Query: 60 SPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G+ KA GF+R GL SD K D + A Sbjct: 61 ADRQADLEEEVKGPAKKISIAEDGSFTKAAQGFMRGKGLSE-SDVYFK-DLNGTEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +R+ + ++VL ++P ++ V +PKSMRW + ++RP++ ++ + Sbjct: 119 IREEGKDTDEVLMEVLPEIVKSVVFPKSMRWGGKN-----MRFVRPIRWLVAL-----HN 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K++ +DL+ I N+T GHRF I+V S++ Y + LEE V+ D + R++ I Sbjct: 169 DKVVPVDLEGIIASNVTVGHRFLGAKSIEVSSIEDYFKKLEENFVVYDQDLRKDMIRKQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++A+++G ++ D++LL+E+ +VE+ F G FDK Y LP+E+++ +K +Q+ F Sbjct: 229 DQVAASIGGKVEMDEELLDEVTYIVEYPTAFYGEFDKSYTELPKEVVKTPMKAHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI V N +D V+ GN +V+ ARL DA F+ D+ + Sbjct: 289 VGEDSNLLPYFIAVRN--GNDYKIENVKAGNEKVLEARLADAKFFFNEDRQH-------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 D R + VVF K+GT ++ RI + K + +D ++ + Sbjct: 339 --------------DLEYYRNKLNTVVFQEKLGTLLDKSERIYNIAKVYGKEVDVNIEDL 384 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 + A +KADL T +V EF ELQG +G +Y+ L+ +N + AI EH PR + VP+ Sbjct: 385 ESAAYYAKADLVTNMVFEFDELQGYMGMQYSRLEGKNDTVSKAIYEHYMPRFNGDTVPST 444 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS----- 526 +S+ DK+DT+ F+AI +P+GS DP+ALRR +GI+ I+LE I+I ++ Sbjct: 445 MEGAILSIIDKMDTIAGFFAIGIQPTGSADPFALRRQCIGILTILLEKNIEIDVARLASI 504 Query: 527 --------QFIED---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +F +D +N+I FF++R K D IR+D++EA+L + N+ + + Sbjct: 505 SLDQYSSVEFDKDSVIENIIEFFNERTKNMFKDMGIRYDVVEAVLASDEKNISDLYVRAE 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +N++ L++ R+ + E +I LL + EK LY D Sbjct: 565 AMNKWIDRDSLTDMLVAFNRVSNLAEGAETD------KIDQALLLEDVEKELYDNFKDVD 618 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + I + MD K Y + D S+ ++ FFD V+V DD ++R NRL+LL+ I + +L V Sbjct: 619 SKISDLMDQKEYTKSLDAFASLKPAVDNFFDNVMVMSDDPKLRANRLALLKNISDSMLKV 678 Query: 696 INVQKIV 702 ++ KIV Sbjct: 679 CDLTKIV 685 >gi|325295561|ref|YP_004282075.1| Glycyl-tRNA synthetase beta subunit [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066009|gb|ADY74016.1| Glycyl-tRNA synthetase beta subunit [Desulfurobacterium thermolithotrophum DSM 11699] Length = 690 Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 239/729 (32%), Positives = 378/729 (51%), Gaps = 75/729 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI EE+PA A + L L L++ + + + TP RL L + Sbjct: 5 NLLLEIGCEELPASFIKPALDFLKTELSKRLEDAFLKPSEIETFGTPRRLILLAYDIPEV 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P++ E +GP V A KA GF RS G+ ++ K Y+A+ + Sbjct: 65 QPDREELLVGPSVKAAFDSEGNPTKAAIGFARSKGVAVEELIKVSNPLGKKGEYVAIKKL 124 Query: 115 ---KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 KP + ++L I+P I +P+ KSMRW + + RP++ IL + E Sbjct: 125 VKGKPAK---EILALILPQLILSIPFKKSMRWGSKK-----VRFGRPIRWILAVYGRE-- 174 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 I+ ++ I NI+YGHRF P+ +V++++ +I LEE V+ D E R++ IL+ Sbjct: 175 ---IVTFEVDGIKSSNISYGHRFLTPNGFEVENVNEFINGLEEKFVVADIEKRKSIILDV 231 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + LA VG EL++D+DLLEE+ LVE+ +GSFDK++L LP+E+ + +K +QK F Sbjct: 232 SETLAKKVGGELLKDEDLLEEVTNLVEYPYPILGSFDKEFLNLPKEVPIVVMKDHQKFFS 291 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L N FI +SNI+ +D + I +G +V+ ARL+DAL F Sbjct: 292 VVDNDGNLKNYFIGISNIKPADE-SVIRKGYEKVLRARLKDALFF--------------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 FN D K L++R+ +L+ +VFH K+GT ++ R+ +L +A+ Sbjct: 336 -----FNEDRKKTLEERVPQLN--GIVFHEKLGTMFDKTKRLELLAPFVAESTGKGRVKE 388 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V+RA +LSKADL TE+V EFPELQG +GK YA+L E+ S AIEE PR + V Sbjct: 389 KVERAALLSKADLLTEMVNEFPELQGTMGKYYALLDGEDESVATAIEEQYFPRFSGDVVA 448 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL---- 525 ++ I++SL++K+D LI F+ + +P+GS DPY+LRR +G+I+ ILEN+I + L Sbjct: 449 RGEVGISLSLSEKIDNLIGFFGVGIRPTGSADPYSLRRNAIGLIQTILENRIHLNLLPVF 508 Query: 526 ---SQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ED Q ++ F +R K+ L +R + D IEAIL D+L + Sbjct: 509 QKAKEIYEDLGLKLSESAPQEVLEFVKERFKVLLRERGFKIDTIEAILSI-TDDLYDALL 567 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 I+ + S + E L++ +R+ I+ K + E +Y E LY Sbjct: 568 RIEAIETLRKSEEFENVLVTLRRVVNIIP---KGFEAVDFEPEGKY-----ETELYEKFL 619 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + + K Y + L+ + ++ FF+ V+V D V++ RLSLL+ I N + Sbjct: 620 LIKEKLSKLISSKNYREALLLIKELKPFVDAFFENVMVMDKDENVKNRRLSLLKTIANEL 679 Query: 693 LIVINVQKI 701 L + + KI Sbjct: 680 LSIADFSKI 688 >gi|262277439|ref|ZP_06055232.1| glycyl-tRNA synthetase, beta subunit [alpha proteobacterium HIMB114] gi|262224542|gb|EEY75001.1| glycyl-tRNA synthetase, beta subunit [alpha proteobacterium HIMB114] Length = 687 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 223/707 (31%), Positives = 366/707 (51%), Gaps = 61/707 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DF LE+YSEEIP +Q A + + ++ L E + ++ + + TP RL + ++ ++ Sbjct: 1 MSDFFLELYSEEIPHGLQIHARKQIHELIFKELNENNIKFKGLDVFSTPKRLIVLIENIT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + + +E GP+VG +A++GFL+S + + I+K KG+ Y L L Sbjct: 61 LNQKIESQEVKGPKVGCNDQALEGFLKSKN--ALKEDLIQKSTDKGEFYFVKLPAKTLLT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L+ +P +Q + W KSMRWS H W RPLKSILC+L K++D Sbjct: 119 SDILRKKLPSILQTINWKKSMRWSD-HDCF----WGRPLKSILCLL-----DNKVLDFSF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N TY + +K+++ Y ++LE+ + ++ R + I + +L Sbjct: 169 FHINSSNSTYVNGPFEDKEVKIKNFKDYKKNLEKNKIEINHIKRESKINIELEKLLKKNK 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 + L++E+ LVE + G FD +YL LP+EL+ LT+ +Q+ F ++ +E + Sbjct: 229 CSFEINNALVDEVTNLVETPVILKGKFDSEYLVLPDELLNLTMVNHQRYFPMKSEQENKM 288 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F+ V+N D I +GN +V+ ARL DA FW D+N NL Sbjct: 289 INSFLFVAN--NFDNKNLITKGNEKVIDARLSDAKFFW--DKNKRQNLV----------- 333 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 +++ +L+ +VF+ K+GT ++ RIR L IA I A+ + A + K Sbjct: 334 -------KQVTKLN--SIVFYQKLGTLYDKTQRIRQLSSVIADTIGANKEDTEIAGSICK 384 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +++V E+PELQG IG+ +A+ Q + +AI+ H P GP VP KISI V++ Sbjct: 385 ADLVSDLVGEYPELQGTIGRYFALEQGFSQEISNAIQNHYLPLGPSGKVPKEKISIAVAV 444 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADK+DTLI F+ I+EKP+ SKDP+ALRRA G++R+I ENKI + L + + + Sbjct: 445 ADKIDTLIGFFGIDEKPTSSKDPFALRRACFGVLRLITENKISLSLKEILNNSKNLYLSQ 504 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKHLNEF 580 ++L FF +R K+ L D+ R D+ +IL +D+ I+ I L++ Sbjct: 505 NYQLSNEKVIEDLFQFFIERFKINLKDKGARLDVTNSILGNNRSDDFYLIMKNINELSKC 564 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHI 638 ++G+ + KR IL ++ N+E +P +L + +E + +++ + Sbjct: 565 LKKSQGQDAISIYKRSKNIL---DQSNQEEEFFGNPDNVLFQHPSEDEILIKLNEARDYF 621 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + LL + + FFD V VN D+++VR NRL LL Sbjct: 622 TTPSRLRDNEKTITLLSELKPMTDNFFDNVKVNDDNQQVRKNRLELL 668 >gi|56459117|ref|YP_154398.1| glycyl-tRNA synthetase subunit beta [Idiomarina loihiensis L2TR] gi|81821718|sp|Q5QY35|SYGB_IDILO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56178127|gb|AAV80849.1| Glycyl-tRNA synthetase, beta subunit [Idiomarina loihiensis L2TR] Length = 688 Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 215/703 (30%), Positives = 359/703 (51%), Gaps = 60/703 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + + L + LK + + ++ Y TP RL + +K + Sbjct: 5 NLLIELGTEELPPKALKSLRDSLKSGIESGLKNAELSFDSIEAYATPRRLAVLVKQVETE 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP + G KA +G+ RS G+ ++K D KG+ L Sbjct: 65 QQDKEVEKRGPAINVAFDDTGKPTKAAEGWARSNGITVEQADRLKTD--KGEWLLHKATV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +++ I+ AI+ +P PK MRW S +IRP+ ++ +L +E + Sbjct: 123 KGQALSVLVQGILEAAIKALPIPKPMRWGD-----STAQFIRPVHTLTVMLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID ++ E GHRFH+P ++ +D+Y+ L EA V+ + E R I ++ RL Sbjct: 173 IDAEILETKSARFIQGHRFHSPQGFELDHVDNYLFKLREAKVIANFEERIETIQSEVSRL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS +G ++++D +L+EE+ LVEW SFD+ +L +P+E + +T+K +Q+ F Sbjct: 233 ASELGGQVIQDDELVEEVAALVEWPVALTASFDQGFLAVPKEPLIVTMKDDQRYFPVEDG 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI ++NI++ D I++GN +VV RL DA F++ D+ Sbjct: 293 KGNLLPQFIFITNIESRDP-QQIIKGNEKVVRPRLADAQFFFESDKKVT----------- 340 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+A LD V+F ++G+ G++ RI VL KIA + ADV +RA Sbjct: 341 ---------LESRVAALD--SVLFQKQLGSIGDKARRISVLAGKIANQLTADVKASERAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L KADL +++V EFPE QG +GK YA+ E+ +AIE+H PR + +P K + Sbjct: 390 LLCKADLVSDMVSEFPETQGVMGKHYALNDGESPVVAEAIEQHYWPRFSGDELPLTKEAC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 V+LADKLDTL+ + I + P G +DP+ALRRA LG++R ++E K+ + L + + Sbjct: 450 AVALADKLDTLVGIFGIGQVPKGDRDPFALRRAALGLLRTLVERKLSLDLHELLAASVEG 509 Query: 533 ------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R + + D+ I D+I+++L +K + F Sbjct: 510 FGDKLSNNTVATDVFDFLLGRFRPWYQDQGITVDVIQSVLARSPSKPTDFDQRVKAVQSF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ ILA K + EIS + L E+E LY ++ ++ Sbjct: 570 KSMDSAASLAAANKRVGNILA---KSDEEISGNVDEALLQEESETTLYRLVKQTEGAVKP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 + +Y L + EP++ FF+ V+VN DD +VR NRL+ Sbjct: 627 LIAAGKYSDALTHLSELKEPVDAFFEHVMVNADDDKVRINRLN 669 >gi|164686272|ref|ZP_02210302.1| hypothetical protein CLOBAR_02710 [Clostridium bartlettii DSM 16795] gi|164601874|gb|EDQ95339.1| hypothetical protein CLOBAR_02710 [Clostridium bartlettii DSM 16795] Length = 688 Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 238/726 (32%), Positives = 373/726 (51%), Gaps = 71/726 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ EE+P+R + L LKE V ++++ +Y TP RL + +S Sbjct: 5 FLLEVGVEELPSRFVESTLTQIKENLEKSLKENRVEFKDIEKYGTPRRLTFVINQISDKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL-AVLRK 115 + EE GP G K GF++S GL +D K+ K D YL L++ Sbjct: 65 SDLEEELKGPSKKISVDADGNFTKPALGFMKSKGLDE-ADVYFKQVGK--DEYLFGTLKQ 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +VLK IVP AI+ V +PK+MRW + + RP++ ++ +L +++ Sbjct: 122 EGKATSEVLKEIVPAAIKGVTFPKAMRWGGKN-----MKFARPIRWMVALL-----NDEV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++L+ I N+T GHRF I+V S++ Y + L + V+LD R+ AI + A + Sbjct: 172 LPINLEGIVASNVTKGHRFLGRKEIEVFSIEDYFKQLSKNFVVLDQNVRKEAIKSQAEEV 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++G E+ + DLLEEI LVE+ F G F+K Y+ LP+E++ +K +Q+ F ++ Sbjct: 232 AKSLGGEVEIEDDLLEEITYLVEYPTAFYGEFNKDYVKLPKEVVTTPMKEHQRYFPV-SK 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V N IV+ GN +V+ ARL DAL F+ D Sbjct: 291 YGKLLPYFIAVRN--GDKHAIDIVKAGNEKVLEARLADALFFYDED-------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD-- 412 + KPL+ + L VVF AK+GT ++ RI L + I + +D L D Sbjct: 335 ------IKKPLESFVENLKT--VVFQAKLGTVYDKTLRIEKLAQDIVETLDEKEILNDTL 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL T +V EF ELQG +G+EYA + EN + AI EH PR + +P + Sbjct: 387 RAAKLCKADLVTNMVFEFTELQGVMGREYAKVGGENDAVAQAIFEHYLPRFAGDILPQTQ 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 + +S+ADKLD++ F+AI KPSGS+DPYALRR LGI+ I+L+ K+DI L + + D Sbjct: 447 EGVALSIADKLDSIAGFFAIGIKPSGSQDPYALRRQALGILSILLDKKLDINLEKLVGDA 506 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ FF +R+K D IR+D+I+A+L + NL +I D+ Sbjct: 507 LNNYDYLTFDKAEVTSQIMDFFIERIKNLFKDLGIRYDVIDAVL---SSNLNSISDIHTR 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 E + E+ + ++ + EK +I + L +AE +L A + Sbjct: 564 AVELNKWLQKEELVEMLTAFNRVSTLAEKAETDI---VDEALLKEDAEVKLNAGFKEIKA 620 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + +K Y++ D SI ++ FD V++ D V+ NRL LL+ I + +L + Sbjct: 621 QVEGFLANKEYNKALDAFASIKPLVDNLFDNVMIMDKDEAVKANRLGLLKQIYDTMLTIC 680 Query: 697 NVQKIV 702 ++ KIV Sbjct: 681 DLSKIV 686 >gi|328676816|gb|AEB27686.1| Glycyl-tRNA synthetase beta chain [Francisella cf. novicida Fx1] Length = 694 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 217/724 (29%), Positives = 383/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELEKVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A +A Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVKSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--------LENKIDIPLSQF 528 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ LEN IDI L + Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLENIIDITLESY 511 Query: 529 IEDQNL----------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + NL I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|71083322|ref|YP_266041.1| glycyl-tRNA synthetase subunit beta [Candidatus Pelagibacter ubique HTCC1062] gi|91762248|ref|ZP_01264213.1| glycyl-tRNA synthetase beta subunit [Candidatus Pelagibacter ubique HTCC1002] gi|71062435|gb|AAZ21438.1| Glycyl-tRNA synthetase beta subunit [Candidatus Pelagibacter ubique HTCC1062] gi|91718050|gb|EAS84700.1| glycyl-tRNA synthetase beta subunit [Candidatus Pelagibacter ubique HTCC1002] Length = 689 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 213/706 (30%), Positives = 360/706 (50%), Gaps = 56/706 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DF +E++SEEIPA +Q + L L +E+ ++++ + TP+RL + +GLS Sbjct: 1 MSDFFIELFSEEIPAGLQSNSRNVLLENFQNLFEEKKILFKKSSSFSTPNRLIILFEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +K EE GP V A +KAI+GFLRS ++ D +KK +KG+ Y K Sbjct: 61 KEIIQKAEEIKGPNVKAPEKAIEGFLRSNQIEK-KDL-LKKTLEKGEFYFFKKASSKINT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L+ P+ + K+ W KSM W + SW RPLKSIL + +K ++ Sbjct: 119 IDLLQEYTPIILDKLQWKKSMTWGNYN-----LSWARPLKSILAVF-----DDKSLNFKF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N T+ + ++ Y ++ +++D R+ I+ + +++ Sbjct: 169 HHLIASNSTFIDKEFEDKKKIFKNFKSYKDFFSQSGIIIDHVLRKEFIVKEIEKISRKNN 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + + LL+E+ +VE + + FD+K+L +P+E++ +T++ +QK F T ++G + Sbjct: 229 FIVEPNNKLLDEVTDIVEQPNILVCKFDQKFLNIPKEILIITMQYHQKYFPTFDKKGKIT 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F++V+N +D I GN RVV ARL DA FW++++ Sbjct: 289 NEFLVVAN--NNDEKGYIKMGNERVVEARLSDAQFFWEKNK------------------- 327 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 S+ L +++++L ++ + +G+ +++ R+R LG I+ + V+ + + K Sbjct: 328 -SQNLVKQVSKLKNMN--YFKGLGSYFDKIQRMRKLGGIISDELLISKDQVELSASICKV 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL ++IV EFPELQG +G +A +Q + AI EH +P G P SI ++L Sbjct: 385 DLVSDIVGEFPELQGIMGGHFAEVQGFDKEIALAISEHYQPVGLDSKTPKKPFSIALALT 444 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------EDQN 533 DK+DTL+ F+ IN+KP+ SKDPYALRR+ LG+I+++++N + + I +DQ Sbjct: 445 DKIDTLVGFFGINQKPTSSKDPYALRRSALGVIKLLIDNNKEFKIKDLISYSTSLHKDQG 504 Query: 534 LIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEFF 581 I F DRLK Y+ ++ IR ++IEA ++ D++ I LN Sbjct: 505 FIFSNDSSQKELSDFLMDRLKYYMKEKKIRSEIIEASIKAHGLDHMNKIYKKASTLNGLI 564 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S GE + S KR + IL E K + E+S P + EK L+ I++ + Sbjct: 565 SKVIGEDIITSYKRAYSILESELKNTDLELSNTTDPGIFKNDYEKNLFKKINEIRKYFTN 624 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + Y + ++L + FFD V VN DD+ ++ NRL LLQ Sbjct: 625 IGKDENYRETLEILAGAKKATSEFFDNVKVNDDDKNIKKNRLELLQ 670 >gi|208779118|ref|ZP_03246464.1| glycyl-tRNA synthetase, beta subunit [Francisella novicida FTG] gi|208744918|gb|EDZ91216.1| glycyl-tRNA synthetase, beta subunit [Francisella novicida FTG] Length = 694 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 216/724 (29%), Positives = 383/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 ++++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A +A Sbjct: 175 NIEILGHKAANITYGHRFHHPQSIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--------LENKIDIPLSQF 528 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ LEN IDI L + Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLENIIDITLESY 511 Query: 529 IEDQNL----------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + NL I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|254372696|ref|ZP_04988185.1| hypothetical protein FTCG_00261 [Francisella tularensis subsp. novicida GA99-3549] gi|151570423|gb|EDN36077.1| hypothetical protein FTCG_00261 [Francisella novicida GA99-3549] Length = 694 Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 212/724 (29%), Positives = 381/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRSLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A +A Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENNYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|304309658|ref|YP_003809256.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium HdN1] gi|301795391|emb|CBL43589.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium HdN1] Length = 691 Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 218/721 (30%), Positives = 361/721 (50%), Gaps = 62/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + + E + + L +G+ ++++R +P RL + + L+ Sbjct: 10 DLLIELGTEELPPKALSRLMESFAHSIREYLGAQGLAFESVRPLASPRRLAVIVSALAGQ 69 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP R G KA GF RS G++ + IK D KG+ Sbjct: 70 QADQTVEKKGPTLVAAYDREGNPSKAAIGFARSCGVEFDALESIKTD--KGEWLFHRSSH 127 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +++++ ++ A+ ++P PK M W + + ++RP ++ + ++ Sbjct: 128 KGRALDEIVGPMIKSALDQLPIPKRMHWGSRRA-----LFVRPAHWLVVLY-----GNRV 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + G +YGHRFHAP I ++S Y L+ A V+ D RR I AHR+ Sbjct: 178 LPCEALGLTAGRTSYGHRFHAPDAITIESPSSYEAQLQHAYVVADFFARRTQIAESAHRI 237 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G L +LL+E+ GLVEW +G+FD ++L +P+E + T+++NQK F Sbjct: 238 ANEMGATLSIAAELLDEVTGLVEWPIPLVGNFDPEFLSVPQEALISTMESNQKYFPLFDN 297 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N FI ++NI+++ ++ GN RVV RL DA F++ DQ Sbjct: 298 TGKLLNRFITIANIESTHPDR-VIAGNERVVRPRLSDARFFFETDQ-------------- 342 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ L Q+ VVF ++G+ E+ R L ++IAQ+I + L RA Sbjct: 343 KQRLEDHAELQQK--------VVFEKQLGSVDEKSVRNSALAREIAQVIGGEPGLAKRAG 394 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL + +V EFPELQG +G+ YA+ Q E AI EH PR + +P Sbjct: 395 RLAKADLASNMVGEFPELQGVMGEYYALGQGEPKDVATAIREHYLPRYSGDAMPATLTGS 454 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADK+D+LI I + PSG KDPYALRRA +G++RI++EN+ I LS E Sbjct: 455 AVALADKVDSLIGILGIGKIPSGDKDPYALRRAAIGVLRIVVENRFGISLSMLAEASISL 514 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 Q+ + F R+ Y ++ I D + A+L +D I++ + EF Sbjct: 515 YSSRLTNPNVKQDFLEFIRARIPGYFAEQGIASDTVRAVLAVSSDAPSDIMERAIGVTEF 574 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ IL EK+ S + L AE L+ +++ T + Sbjct: 575 RTYPEAAALAAANKRVRNIL---EKRTDNGSQAVDGALLKESAEVELFHRLAE--TREKL 629 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + Y L + P++ FF++VLVN + EVR NRL+LL ++ + L + ++ + Sbjct: 630 TTLRGNYSAQLKTLAELRTPVDNFFEKVLVNAESPEVRTNRLNLLANLQELFLGIADIAE 689 Query: 701 I 701 + Sbjct: 690 L 690 >gi|254374154|ref|ZP_04989636.1| glycyl-tRNA synthetase beta subunit [Francisella novicida GA99-3548] gi|151571874|gb|EDN37528.1| glycyl-tRNA synthetase beta subunit [Francisella novicida GA99-3548] Length = 694 Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 212/724 (29%), Positives = 381/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELEKVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A +A Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQRLAELGNFDSQQAYRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELA-KATANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|88801020|ref|ZP_01116569.1| Glycyl-tRNA synthetase, beta subunit [Reinekea sp. MED297] gi|88776223|gb|EAR07449.1| Glycyl-tRNA synthetase, beta subunit [Reinekea sp. MED297] Length = 681 Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 211/713 (29%), Positives = 364/713 (51%), Gaps = 56/713 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + +I L++ G+ +++ ++ P RL L LK L Sbjct: 5 DFLIELGTEELPPKALRMLKNAFAEGIIERLQKAGLSFEDSERFAAPRRLALTLKNLELK 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 P++ +ER GP A +AI+GF +S G+ + +++ D VY V KP + + Sbjct: 65 QPDEEQERKGPNAKAPAQAIEGFAKSCGVTVVDLEELETDKGTWLVYRGV--KPGKPTAE 122 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L IV + +P PK MRW ++RP+K +L +L ++++ ++ Sbjct: 123 LLPEIVQQTLDALPIPKRMRWGARRD-----EFVRPVKWLLMLL-----GDEVVPAEIYG 172 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGL 241 + GN++ GHRFHAP I + S Y L E V+ R I + ++A+ G+ Sbjct: 173 VSSGNLSRGHRFHAPKDIAITSASAYQETLRAEGKVMASYGERHKLIEAEVKKVAAEKGV 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 V D DLL+E+ L EW +G F++++L +P E + +++ +QK F T EG + Sbjct: 233 VPVIDADLLDEVTALNEWPVALVGQFEERFLEVPAEALMSSMEEHQKYFPTVDAEGNIQP 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI ++NI++ D +++GN +V+ RL DA FW+ D+ Sbjct: 293 YFIFIANIESKDP-QVVIEGNEKVIRPRLSDAAFFWETDKKT------------------ 333 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 L R+A L V F ++G+ ++V RI+ + IA IDA V+ +RA L+KAD Sbjct: 334 --KLADRVASLKT--VKFQEQLGSVFDKVERIQKIAGHIAGQIDASVSEAERAAYLAKAD 389 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EF +LQG G+ YA+ E + +AI E KP G + +P ++ + V+LAD Sbjct: 390 LVTDMVFEFTDLQGIAGRYYALADGEPEAVAEAILEQYKPAGAGDALPESREGMAVALAD 449 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ---FIEDQ------ 532 +LD L + I + P+G+KDP+ALRRA LG++RI++E ++D+ L+ F DQ Sbjct: 450 RLDNLSGLFGIGQPPTGTKDPFALRRAALGVLRIVVERELDLDLADLVAFAADQHNKLPK 509 Query: 533 ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL-IKHLNEFFSSAK 585 +++ + DR + D IR ++ +A+ R N +DL ++ + EF + Sbjct: 510 RDAVVNDVVHYALDRFSAWYADEGIRTEVFQAV-RALNLTKPYDIDLRVRAVAEFSKLDQ 568 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + KR+ L+ K +I EI E L + + ++ Sbjct: 569 AEALAAANKRVSNFLS---KVEGDIPTEIDVARFEESVEGDLLKALDGVEAKVSAAVQSS 625 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + L ++ + ++ FFD+V+V DD VR+NRL+LL ++ + + V ++ Sbjct: 626 DYRTALNELSTLRDAVDAFFDKVMVMADDDNVRNNRLALLSKLRGLFVQVADI 678 >gi|167628096|ref|YP_001678596.1| glycine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167598097|gb|ABZ88095.1| Glycine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 695 Score = 323 bits (829), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 218/724 (30%), Positives = 367/724 (50%), Gaps = 60/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + AE L + LK+ V + + + +P RL +K L+ Sbjct: 7 DFLFELGTEELPPKALRSLAESLLNSVETQLKDAKVGFGGAKWFASPRRLSFIMKDLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF S G++ D + + KGD + Sbjct: 67 QEDIVVEKQGPLVSIAYKDDEPTKVALGFASSCGVEL--DQLDRIETPKGDKLFYKTIQS 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +L +L+ I+ A++++P PK MRW S ++RP+ +L + +E I+ Sbjct: 125 GQLTVSLLQEIITKALKQLPIPKMMRWGD-----SVVEFVRPVHWVLALYGSE-----IV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + + Y R L EA VL+D E R+ ++ A ++A Sbjct: 175 DIEILGHKASNITYGHRFHHPDAISINEIAEYERVLAEAKVLVDWEQRKQMLIEQAQKIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +++ D DL+EE+ +VE+ + SF+K +L +P+E + +++ +QKCF + Sbjct: 235 KENNYKVILDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISSMEEHQKCFALLDCD 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L + FI +SNI+ S + GN +V+ ARL DA F Sbjct: 295 NNLVSNFITISNIE-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL K L+Q + RL+ +V F K+G ++ RI +K+A L + D RA + Sbjct: 334 YDTDLKKSLEQLLPRLE--NVTFQNKLGNMYQKAQRIANTAQKLADLNNVDSQQAYRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL +++V EF +LQG IGK YA E DAIE+ P+ +P ++ Sbjct: 392 LAKADLISDMVFEFTDLQGIIGKYYAKAHGETDIVADAIEQQYWPKYSGAELPRTDVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ + I +KP+G+KDP+ALRR+ +GI+RI+ + IDI L + IE Sbjct: 452 VALAEKLDTLVGIFGIGQKPTGNKDPFALRRSAIGILRILRDTNIDIALEKVIEIALDSY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ F DRLK D + ++ E+++ + D++ I + Sbjct: 512 KEVNNLEFSSDIKAEVVSFCIDRLKNLYKDEGVAVNIFESVINTKYDSIKDFAARILAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-PQYLLLEAEKRLYAVISDFGTH 637 F S+ K + + S KR+ IL+ ++++ S I + E E L I + Sbjct: 572 SFISTDKAQSLIASNKRVANILSKNASEDKKYSYNIEIAKTARNEYELALAYSIEEISAD 631 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + + ++ Y+ +LL + + I FF+ V+V DD VRDNR++LL I + + V + Sbjct: 632 LDKYLGNREYNYALELLTCLDKVIAEFFENVMVMDDDASVRDNRIALLATIHKMFVGVAD 691 Query: 698 VQKI 701 + K+ Sbjct: 692 ISKL 695 >gi|241668636|ref|ZP_04756214.1| glycine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877169|ref|ZP_05249879.1| glycyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843190|gb|EET21604.1| glycyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 695 Score = 323 bits (827), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 224/729 (30%), Positives = 364/729 (49%), Gaps = 70/729 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + AE L + LK+ V + + + +P RL +K L+ Sbjct: 7 DFLFELGTEELPPKALRGLAESLLNSVETQLKDAKVGFGGTKWFASPRRLSFIIKDLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKD------PKKGDVYLAVLRKP 116 + + E+ GP V K DG L S C ++ D KGD + Sbjct: 67 QEDIVVEKQGPLVSIAYK--DGEPTKVALGFASSCGVELDQLDRIETPKGDKLFYKTIQS 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +L +L+ I+ A++++P PK MRW S ++RP+ +L + E I+ Sbjct: 125 GQLTVSLLQEIITKALKQLPIPKMMRWGD-----SVVEFVRPVHWVLALYGNE-----IV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + + Y R L EA VL+D E R+ ++ A ++A Sbjct: 175 DIEILGHKASNITYGHRFHHPDAISINEIAEYERLLAEAKVLIDWEQRKQMLIEQAKKIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+ +L +P+E + +++ +QKCF + Sbjct: 235 KENNYKVVLDDDLVEEVCAIVEYPNAMLCSFNNDFLRVPQEALISSMEEHQKCFALLDCD 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L FI +SNI+ S + GN +V+ ARL DA F Sbjct: 295 NNLVANFITISNIE-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL K L+Q + RL+ +V F K+G ++ RI +K+A L + D RA + Sbjct: 334 YDTDLKKSLEQLLPRLE--NVTFQNKLGNMYQKAQRIANTAQKLADLNNVDSQQAYRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL +++V EF +LQG IGK YA E DAIE+ P+ +P ++ Sbjct: 392 LAKADLISDMVFEFTDLQGIIGKYYAKAHGETDIVADAIEQQYWPKYSGAELPRTDVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ + I +KP+G+KDP+ALRR+ +GI+RI+ + IDI L + IE Sbjct: 452 VALAEKLDTLVGIFGIGQKPTGNKDPFALRRSAIGILRILRDTNIDIALEKVIEIALDSY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ F DRLK D + ++ E+++ + D++ I + Sbjct: 512 KEVNNLEFSSDIKAEVVSFCLDRLKNLYKDEGVAVNIFESVINTKYDSIKDFAARIIAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQIL---AIEEKK---NREISLEISPQYLLLEAEKRLYAVIS 632 F S+ K + + S KR+ IL A E+KK N EI+ +Y E L I Sbjct: 572 SFISTDKAQSLIASNKRVANILIKNASEDKKYSYNIEIAKTAGNEY-----ELALAYSIE 626 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + + + ++ Y+ +LL + + I FF+ V+V DD VRDNR++LL I + Sbjct: 627 EISADLDKYLGNREYNYALELLTCLDKVIAEFFENVMVMDDDASVRDNRIALLATIHKMF 686 Query: 693 LIVINVQKI 701 + V ++ K+ Sbjct: 687 VGVADISKL 695 >gi|83642934|ref|YP_431369.1| glycyl-tRNA synthetase subunit beta [Hahella chejuensis KCTC 2396] gi|123767557|sp|Q2SQY0|SYGB_HAHCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|83630977|gb|ABC26944.1| Glycyl-tRNA synthetase, beta subunit [Hahella chejuensis KCTC 2396] Length = 692 Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 217/719 (30%), Positives = 361/719 (50%), Gaps = 61/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+EI +EE+P + + AE + + L++ + + + Y P RL +++ GL+ Sbjct: 5 DFLVEIGAEELPPKALRQLAEAFAQGIRQRLEKAQLSFSELTWYAAPRRLAVHVSGLAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ E+ GP + GA KA +GF RS G T D K + KG + ++ Sbjct: 65 QPDLEVEKRGPALQAAFDAAGAPTKACEGFARSCG--TTPDKLEKLETDKGVWLVFRSKQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L IV ++ +P PK MRW + ++RP+ I+ + EK+ Sbjct: 123 AGAPTTGLLPAIVEESLAALPIPKRMRWGARRT-----EFVRPVHWIIMLF-----GEKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ID ++ + GN T GHRFH P PI++ + +Y L+ V+ D E R+ I Sbjct: 173 IDCEILGLKAGNTTLGHRFHHPAPIEIATPANYKDALKNTGYVMADFEERKALIRQQVEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A V D++LLEE+ L EW MG F+ ++L +P E + T+K NQK F Sbjct: 233 IAKQTSGMAVIDEELLEEVASLNEWPTALMGRFEDRFLEVPAEALISTMKGNQKYFHVVD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG + FI V+NI++ D ++ GN RV+ RL DA F Sbjct: 293 AEGRMLPYFITVANIESKDP-QQVIDGNERVIRPRLSDAAFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F+ D + L R+ D+ +VF ++GT ++ R+ L KIA ID++ RA Sbjct: 334 --FSTDKKRTLASRLE--DLKPIVFQQQLGTVYDKAIRVGKLAAKIAAKIDSNPEWAQRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL TE+V EFPELQG +G+ YA + +E A EE PR + +PT Sbjct: 390 GELSKTDLATEMVMEFPELQGTMGRYYAAIDSEPEEVSMAQEEQYLPRFAGDQLPTTLTG 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 VSLADKLDT++ + IN+ P+G+KDP+ LRRA LG++RI++E K+D+ L++ ++ Sbjct: 450 CAVSLADKLDTIVGIFGINQPPTGAKDPFGLRRAALGVLRILVEKKLDLDLAECVQWAQE 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ + DR + + + + ++ ++L + + + EF Sbjct: 510 LHGDLPAENLETAVVDYMLDRFRAWYEEAGVPTEVFLSVLARRPTKPVEFDQRVLAVAEF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLE-ISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + KR+ IL+ K+ +IS E +P+ EAEK L+ + + + Sbjct: 570 LKLDAAQALAAANKRVSNILS---KEQVDISAESANPELFTEEAEKNLFRALQEKSESAR 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ + + Q L + + I++FFD+V+V VDD +R NR++LL ++++ L V ++ Sbjct: 627 PYIEQRNFTQALQQLAELKDVIDLFFDKVMVMVDDPAIRSNRMTLLASLRHVFLQVADI 685 >gi|118497331|ref|YP_898381.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. novicida U112] gi|195536017|ref|ZP_03079024.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. novicida FTE] gi|118423237|gb|ABK89627.1| glycyl-tRNA synthetase beta subunit [Francisella novicida U112] gi|194372494|gb|EDX27205.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. novicida FTE] Length = 694 Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 211/724 (29%), Positives = 381/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 ++++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A +A Sbjct: 175 NIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|325268032|ref|ZP_08134678.1| glycyl-tRNA synthetase beta subunit [Kingella denitrificans ATCC 33394] gi|324980417|gb|EGC16083.1| glycyl-tRNA synthetase beta subunit [Kingella denitrificans ATCC 33394] Length = 705 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 218/692 (31%), Positives = 355/692 (51%), Gaps = 58/692 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + ++ L+ + L++ +I Y +P RL + + + Sbjct: 30 LLIELFTEELPPKALNQLGNHLAQSIAEGLEKAQLIDGATEYTAYASPRRLAVQVARVKS 89 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 ++ + GP V A +KAI+GF RS G++ S I D K+ DVY + + + Sbjct: 90 EQADQHIVKKGPAVTANEKAIEGFARSCGVEK-SSLHIVHDGKQ-DVYAHEFTQKGQKLA 147 Query: 122 DVLKTIVPVAIQKVPWPKSMRW-STTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +L IV A++K+P PK MRW S+TH+ ++RP+ ++ + AE ++ LD Sbjct: 148 ALLGDIVNAAVKKLPIPKVMRWGSSTHT------FVRPVHGLVAMHGAEVLPINVLGLDS 201 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAV 239 + N T GHRF + I D Y L EE V+ R+NAI A+ + Sbjct: 202 R-----NCTLGHRFLSHGEITFAKADDYAAQLAEEGKVIASFAERKNAIRTALDEQAARL 256 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 + D+ LL+E+ LVE+ V +F++ +L +P+E + LT++ NQK F + G L Sbjct: 257 NATVAADEALLDEVTALVEYPVVLQAAFEEHFLAVPQECLILTMQQNQKYFPLLNQNGKL 316 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F+LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 317 MNRFLLVSNLQTKDP-SHIIQGNERVLRARLSDAEFFYKQDQK----------------- 358 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L+ R+ +L +VV+H KIG+Q ERV R++ + IA ++AD A+ +RA L+K Sbjct: 359 ---ATLESRLPKL--ANVVYHNKIGSQAERVERLQTIAAYIAGCLNADKAVAERAARLAK 413 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA L E A+E+H +PR + +P + I V+L Sbjct: 414 ADLVTEMVGEFPELQGTMGKYYAQLDGETPEIAAAVEQHYRPRFAGDALPESTIGTAVAL 473 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-PLSQFIEDQ------ 532 ADKL+TL+ W I P+G KDPYALRR+ LG++R+++ + + I L F+ D Sbjct: 474 ADKLETLVGIWGIGLIPTGDKDPYALRRSALGVLRMLMNHDLSIRELLTFVFDSFPKGLL 533 Query: 533 ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + F RL + L + D D++ A+L D + + ++ + +F + Sbjct: 534 AEKTVAEVADFMQARLAVLLQN-DYPQDVVAAVLAQRPDRVNNLTAKLQAVVQFKQLPES 592 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KR+ +L E + + Q + EK L+A + D +Q ++D + Sbjct: 593 AALAAANKRVQNLLKKSEGALGNVDAALQQQ----DEEKALFAAVQDLQPKVQAALDAQD 648 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + L ++ ++ FFD V+V D V+ Sbjct: 649 FAAALSALAAVKPQVDAFFDGVMVMAADAAVK 680 >gi|85860061|ref|YP_462263.1| glycyl-tRNA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|123517130|sp|Q2LVI9|SYGB_SYNAS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|85723152|gb|ABC78095.1| glycyl-tRNA synthetase beta chain [Syntrophus aciditrophicus SB] Length = 690 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 230/726 (31%), Positives = 371/726 (51%), Gaps = 68/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EEIPA KA +D+S ++ L E + + + + TP RL L + ++ Sbjct: 4 ELLLEIGTEEIPAAFLPKALQDMSSMIRKALTEARIPFGQVHTFGTPRRLCLAVADVAEK 63 Query: 63 SPEKIEERLGP--RV-----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +++ E+LGP RV G KA GF +S G+ ++ D KG+ Y+ + R Sbjct: 64 QEDQVIEKLGPARRVSFDADGNPTKAALGFAKSQGVDISEIGTMQTD--KGE-YICISRH 120 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++ I + + KSMRW F + RP+ IL + E Sbjct: 121 ISGKSTVSLLSEMLSRLITSLSFKKSMRWGNLD-----FRFARPIHWILALYGGE----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ I G + GHRF P V +L Y+ E V++ PE R+ IL +A + Sbjct: 171 VIPFRIENIESGATSRGHRFMHPEAFPVSNLQEYLARTREHFVIVAPEERKRIILEEARK 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AV ++E++DLLE + LVE+ + GSFD+KYL LP+E++ ++ ++QK F Sbjct: 231 AAAAVSGRVLENEDLLETVTYLVEYPTIVCGSFDRKYLELPKEVLITSMMSHQKYFPVVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L FI ++N A D A + +GN +V+ ARL DA F++ DQ Sbjct: 291 QEGRLLPFFITINNTLARDP-AVVTRGNEKVIRARLSDAQFFFEEDQKIR---------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDR 413 LD R+ L VVFH +GT E+V R R L IA ID + V+R Sbjct: 340 ----------LDDRVEGLQ--QVVFHTLLGTSYEKVQRFRKLAGWIADRIDPSLKNRVNR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 + +L+KADL T++V EF ELQG +G+EYA+L E+ + AI EH P ++P Sbjct: 388 SALLAKADLDTQMVGEFSELQGIMGREYALLAGEDPTVARAIYEHYLPLTAGGDLPQTHE 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 VS+ADK+D++ F+ +N P+G+ DPYALRR LG+I IIL+ K + L +++ Sbjct: 448 GAIVSIADKMDSIAGFFGVNLVPTGTADPYALRRQALGVINIILDKKYPLTLDDLVDECI 507 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++I FF RL+ L + HD++ A+L +L+ ++ I+ Sbjct: 508 SILEEKLKRPAEETRKDVIEFFRGRLENMLISQGHPHDVVSAVLAAGFADLVQVIKKIEA 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E ++ KR IL E + R I P E +LY+ + + Sbjct: 568 MESFKAHPAYEPLAIAFKRAGNILK-EFRNGR-----IDPALFSAAEENQLYSTLLEARA 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + ++++ Y L ++ +PI+ FF+ V+V VD+ +R NRLSLL+ + +I + Sbjct: 622 RVVKALEKDDYPAALLELAALRQPIDHFFESVMVMVDEENIRFNRLSLLEALFSIFRRIA 681 Query: 697 NVQKIV 702 + +IV Sbjct: 682 DFSRIV 687 >gi|148284356|ref|YP_001248446.1| glycyl-tRNA synthetase subunit beta [Orientia tsutsugamushi str. Boryong] gi|146739795|emb|CAM79670.1| glycyl-tRNA synthetase beta chain [Orientia tsutsugamushi str. Boryong] Length = 683 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 225/704 (31%), Positives = 358/704 (50%), Gaps = 70/704 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 +LE+YSEEIPA+MQ KA I K + + +++ Y P R+ L+ S Sbjct: 7 ILELYSEEIPAKMQKKAELAFQEIFTKNFKLANISFNHLKVYIGPCRVVLHTVFSSKELA 66 Query: 65 EKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 K E GP+VGA K A++GF ++ + + D IK + ++ VY V P + I+D+ Sbjct: 67 AKAIEHKGPKVGAKKSAVEGFCKAKSILS-KDLTIKTFNNQQFYVYTHV--TPTQPIKDL 123 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L I+ +I++ WPKSM+W +W+RPL++ILC+ E+ K + + Sbjct: 124 LPEIILNSIKEYTWPKSMKWGNYQ-----INWVRPLRNILCMFNGEELK-----ISWHHL 173 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 N ++GH+F +P+ V + Y +L + V+LD R+ ILN + +G+ L Sbjct: 174 TSNNKSFGHKFMSPNSFTVSTWKDYTNNLRDNFVILDRSERQAIILNSLEKTCQTLGITL 233 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCF 303 + LL+E+ GLVE+ V G+ ++L LPEE+I +++T+QK F T+ LA F Sbjct: 234 NYNNKLLDEVTGLVEYPIVLYGTIPNEFLSLPEEIIITSVQTHQKYFTTKDHSNKLAPYF 293 Query: 304 ILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSK 363 + V+NI D + I++GN +V+++RL DA++F+ +D Sbjct: 294 LFVTNINTED-YSNIIKGNEKVLSSRLTDAIYFFNQDCQ--------------------- 331 Query: 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLC 423 L + VVFH KIG+ ++V RI+ + K+A D ++A+ A L K+DL Sbjct: 332 -LTLLSKLEKLKKVVFHTKIGSIFDKVQRIKKICHKLAP-DDQELAI---AAELCKSDLV 386 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 +E+V+EFP LQG +GK YA+ + + + I H P + VP K +I ++LADKL Sbjct: 387 SEVVQEFPNLQGIMGKYYALNDKLSPAVANIIGNHYYPTRIEDEVPNGKAAI-LALADKL 445 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 D L + + E+ + SKDP+ALRR I RIIL NKI + L + Sbjct: 446 DNLTSLYLAGERATSSKDPFALRRCAFSIARIILTNKIQVKLLDLLTFIYQLHDIYTNEL 505 Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL-IKHLNEFFSSAKGEKF 589 ++LF D+ K L+ + H L+EAI + N + LT ++L + L+ F +S KG+ F Sbjct: 506 ATEVLLFIKDKTKNLLNAK-FNHLLVEAIFQQNNYDDLTELELRMNILDHFLTSTKGQNF 564 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY-----AVISDFGTHIQESMDH 644 + S KR + I+ EE + +I LL + E LY + +S T Sbjct: 565 IQSYKRAYNIIKDEEIRQA----KIDGYKLLTKQETILYQQAMNSKVSQLSTQFSAESFT 620 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 Q+ +L I E F D V VN D+ + D R +LQY+ Sbjct: 621 LALDQLSNLSIQIAE----FLDNVTVNTTDQYLTDTRKLILQYV 660 >gi|83589468|ref|YP_429477.1| glycyl-tRNA synthetase, beta subunit [Moorella thermoacetica ATCC 39073] gi|123725759|sp|Q2RKV5|SYGB_MOOTA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|83572382|gb|ABC18934.1| glycyl-tRNA synthetase beta chain [Moorella thermoacetica ATCC 39073] Length = 694 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 226/730 (30%), Positives = 350/730 (47%), Gaps = 70/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D + EI +EEIPAR + A E ++ + LL+E + Q + Y TP RL LYL L+ + Sbjct: 4 DLIFEIGTEEIPARFMNPALEQMAAVASQLLQEYRLPCQKVATYGTPRRLALYLTALAEN 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E ++E GP V G KA GF RS G+ + + ++ G A+ R+ Sbjct: 64 QEELVQEIKGPPVKAAFTADGQPTKAALGFARSMGVAV--EELVTREYNGGQYVFAIKRE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R VL ++ + + +PK MRW + + RP++ +L + +E + Sbjct: 122 QGRPAVTVLPELLLAVVNALSFPKPMRWGSLE-----IRFARPIRWLLALFGSE-----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++L + N TYGHRF AP P +V + Y + LEE VL+D RR I L Sbjct: 172 IPVELAGLTASNQTYGHRFLAPGPHQVPTASAYFQVLEENYVLVDQHRRRQLIWEQITGL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS G + +D +LLEEI LVE+ G FD +YL LP+E++ ++ +Q+ F Sbjct: 232 ASREGGRVEKDPELLEEITYLVEYPTALAGHFDPEYLKLPQEVVITPMRDHQRYFPVWNA 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N A D I +GN RV+AARL DA F++ D+ Sbjct: 292 QGELLPRFITVHNGTA-DHLENISRGNERVLAARLADAAFFYQEDRQT------------ 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 PL ++ +L+ ++VF +GT + R++ L + +D V LV+ Sbjct: 339 --------PLAAKVPKLE--EIVFQESLGTMLAKTRRLQRLAVNLVNTLDLPAELVPLVE 388 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R L+KADL T +V EFPELQG +G YA E C I +H PR + +P + Sbjct: 389 RTAELAKADLVTAMVYEFPELQGIMGSYYAAHDGERAEVCQGIRQHYWPRFAGDRLPDSL 448 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + V LAD+LDTL+ + P+GS+DPYALRR G++ I +E + L+ I Sbjct: 449 TGMVVGLADRLDTLVGCFGAGLIPTGSQDPYALRRQATGVVTIAVEFNLKFSLTASIAAA 508 Query: 531 ------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + L+ F RL+ L ++ R+D+I+A L +D+L Sbjct: 509 YEGYTAGGIQLARPLDVVQEQLVQFCRQRLEHLLEEKGYRYDVIQACLAAGSDDLAAAYH 568 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L+ F + R F + ++ RE + P+ L +AE LY + Sbjct: 569 RTRDLSAFREEEGFAALQTAFTRAFNL----ARQARE-KYHLRPEALQEKAEAELYRALM 623 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + + Y + ++ PI+ FFD VLV D EVR+NRL+LLQ I N++ Sbjct: 624 ETRHQAEPRLRAGDYLAALKAMAALRGPIDAFFDNVLVMAPDMEVRNNRLALLQAIVNLV 683 Query: 693 LIVINVQKIV 702 + + ++V Sbjct: 684 FQIADFSRLV 693 >gi|307243671|ref|ZP_07525811.1| glycine--tRNA ligase, beta subunit [Peptostreptococcus stomatis DSM 17678] gi|306492880|gb|EFM64893.1| glycine--tRNA ligase, beta subunit [Peptostreptococcus stomatis DSM 17678] Length = 689 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 232/733 (31%), Positives = 375/733 (51%), Gaps = 77/733 (10%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R L L L E V + + Y TP RL L ++GL Sbjct: 1 MNNYLLYEIGVEEMPSRFVESTLGQLKDNLTRALTENRVGFSEIETYATPRRLVLVVRGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G+ KA GF++ GL D K D + A Sbjct: 61 ADRQADLEEEVKGPSKKIALAEDGSFTKAALGFMKGKGLSE-KDVYFK-DLDGTEYIYAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 L++ E +L ++ ++ V +PKSMRW + ++RP++ +L ++ Sbjct: 119 LKETGEDTEKILCDVLGEIVKAVVFPKSMRWGGKN-----MRFVRPIRWLLALM-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++++ I N T GHRF I+V S++ Y+ LEE V+LD R+ I + Sbjct: 169 DRVVPVNMEGIVASNKTVGHRFLGSKSIEVISIEDYLAKLEENYVILDQAKRKAIIRDQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-V 291 ++A+++ + D+DLLEE+ +VE+ F G FDK+Y LP+E+++ +K +Q+ F V Sbjct: 229 DKVAASINGRVDMDEDLLEEVTYIVEYPTAFYGEFDKEYASLPKEVVKTPMKAHQRYFPV 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQ----GNSRVVAARLEDALHFWKRDQNNLPNL 347 R +LAN FI V N G +++ GN +V+ ARL DAL F+K D+ Sbjct: 289 VDDRGELLAN-FIAVRN-----GNDYMIENVKKGNEKVLEARLADALFFFKEDRK----- 337 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 K L ++LD VVF K+GT ++ R+ L KIA IDA Sbjct: 338 ---------------KALVDYRSQLDT--VVFQEKLGTLLDKSERLYKLAGKIADEIDAG 380 Query: 408 VA--LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 + L++RA L KADL T +V EF ELQG +G EY+ L E+ +AI EH PR Sbjct: 381 IKKDLLERAAYLCKADLVTSMVFEFDELQGYMGMEYSKLDKEDPIVSEAIYEHYMPRFSG 440 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P + +S+ DK+DT+ F+AI +P+GS DP+ALRR LGI+ I+LE I++ + Sbjct: 441 DEIPQSAEGAILSIVDKIDTIAGFFAIGIQPTGSADPFALRRQCLGILTILLEKNIELDI 500 Query: 526 SQFIE---DQ-------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ + DQ ++ FF++R ++ D IR+D+++A+L + N+ Sbjct: 501 AKLADLALDQYAGVDFDKDVVVDQIVAFFNERTRVMFKDLGIRYDVVDAVLASDEKNMSD 560 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + +N + + L++ R+ + E L+I LL AEK LYA Sbjct: 561 LYARAQAINAWIDNPSLNDMLVAFNRVSTLAEKAE------GLDIKEATLLEAAEKDLYA 614 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I++ M K+Y + D S+ I+ FFD V+V ++ +VR+NRL+LL I Sbjct: 615 KFVLVEKEIEDLMGQKKYTESLDSFASLKPAIDAFFDTVMVMDENLDVRNNRLALLANIY 674 Query: 690 NIILIVINVQKIV 702 +L + ++ KIV Sbjct: 675 KAMLKICDLSKIV 687 >gi|189183850|ref|YP_001937635.1| glycyl-tRNA synthetase subunit beta [Orientia tsutsugamushi str. Ikeda] gi|189180621|dbj|BAG40401.1| glycyl-tRNA synthetase beta chain [Orientia tsutsugamushi str. Ikeda] Length = 683 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 221/700 (31%), Positives = 361/700 (51%), Gaps = 62/700 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 +LE+YSEEIPA+MQ KA I K + + +++ Y P R+ L+ S Sbjct: 7 ILELYSEEIPAKMQKKAELAFQEIFTKNFKLANISFNHLKVYIGPCRVVLHTVFSSKELA 66 Query: 65 EKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 K E GP+VGA K A++GF ++ + + D IK + ++ VY V P + I+D+ Sbjct: 67 AKAIEHKGPKVGAKKSAVEGFCKAKSILS-KDLTIKTFNNQQFYVYTHV--TPTQPIKDL 123 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L I+ ++++ WPKSM+W +W+RPL++ILC+ E+ K + + Sbjct: 124 LPEIILNSVKEYTWPKSMKWENYQ-----INWVRPLRNILCMFNGEELK-----ISWHHL 173 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 N ++GH+F +P+ V + Y +L + V+LD R+ ILN + +G+ L Sbjct: 174 TSNNKSFGHKFMSPNSFTVSTWQDYTNNLRDNFVILDRSERQAIILNSLEKTCKTLGITL 233 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCF 303 + LL+E+ GLVE+ V G+ ++L LPEE+I +++T+QK F T+ LA F Sbjct: 234 NYNNKLLDEVTGLVEYPIVLYGTIPNEFLSLPEEIIITSVQTHQKYFTTKDHNNKLAPYF 293 Query: 304 ILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSK 363 + V+NI D + I++GN +V+++RL DA++F+ +D Sbjct: 294 LFVTNINTED-YSNIIKGNEKVLSSRLSDAIYFFNQDCQ--------------------- 331 Query: 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLC 423 + VVFH K+G+ ++V RI+ + K+A D ++A+ A L K+DL Sbjct: 332 -FTLLSKLEKLKKVVFHTKLGSIFDKVQRIKKICHKLAP-DDQELAI---AAELCKSDLV 386 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 +E+V+EFP LQG +GK YA+ + + + I H P G + VP K +I ++LADKL Sbjct: 387 SEVVQEFPNLQGIMGKYYALNDKLSPAVANIIGNHYHPTGIEDEVPNGKAAI-LALADKL 445 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 D L + + E+ + SKDP+ALRR I RIIL NKI + L + Sbjct: 446 DNLTSLYLAGERATSSKDPFALRRCAFSIARIILTNKIQVKLLDLLTFIYQLHDIYTNEL 505 Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL-IKHLNEFFSSAKGEKF 589 ++LF D+ K L+ + H L+EAI + N + LT ++L + L+ F +S KG+ F Sbjct: 506 ATEVLLFIKDKTKNLLNAK-FNHLLVEAIFQQNNYDDLTELELRMNILDHFLTSTKGQNF 564 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG-THIQESMDHKRYH 648 + S KR + I+ EE + +I + LL + E LY D + + + + + Sbjct: 565 IQSYKRAYNIIKDEEIRQAKIDV----CKLLTKQETILYQQAVDAKISQLFTQLSAETFS 620 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + D L +I I F D V VN D+ + NR +LQ++ Sbjct: 621 LLLDQLSNIGISIAKFLDNVPVNTTDQCLTYNRKLILQHV 660 >gi|238022199|ref|ZP_04602625.1| hypothetical protein GCWU000324_02106 [Kingella oralis ATCC 51147] gi|237866813|gb|EEP67855.1| hypothetical protein GCWU000324_02106 [Kingella oralis ATCC 51147] Length = 686 Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 217/675 (32%), Positives = 347/675 (51%), Gaps = 64/675 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQI 99 Y +P RL + + + P ++ R G V AG KA++GF RS G++ I +I Sbjct: 49 YASPRRLAVSVANVKPVQADQHVVRKGVSVAAGMKDGVPTKALEGFARSCGVE-IGSLKI 107 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW-STTHSPISAFSWIRP 158 D K+ DVY + + + +L I+ AI+K+P PK MRW S+TH+ ++RP Sbjct: 108 IHDGKQ-DVYAHEFTQAGQTLAALLGEIINTAIKKLPIPKVMRWGSSTHT------FVRP 160 Query: 159 LKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMV 217 + ++ + A+ ++ LD G T GHRF + I + D Y + + E+ V Sbjct: 161 VHGLVVLHGADVVPVNVLGLD-----SGRQTLGHRFLSQGEIVLAQADDYAQQIAEQGKV 215 Query: 218 LLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEE 277 + RR AI + +++ ++ + D LL+E+ LVE+ V F+ +L +P+E Sbjct: 216 IASFAKRRAAIKAELDKVSGSLNARVAADDALLDEVTALVEYPVVLQAEFEAHFLAVPQE 275 Query: 278 LIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFW 337 + LT++ NQK F + G L N F+LVSN+Q +D + I+ GN RV+ ARL DA F+ Sbjct: 276 CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADP-SHIIHGNERVLRARLSDAEFFY 334 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 K+DQ L+ R+ +L+ VV+H KIG+Q +R+ R++ + Sbjct: 335 KQDQK--------------------ATLESRLPKLE--HVVYHNKIGSQAQRIDRLQTIA 372 Query: 398 KKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 IA+ + D A +RA L+KADL TE+V EFPELQG +GK YAVL E AIE+ Sbjct: 373 AHIAEQLGTDRATAERAARLAKADLVTEMVGEFPELQGTMGKYYAVLDGEQPEIAAAIEQ 432 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H +PR + +P + I+ V+LADKL+TL+ W I P+G KDPYALRRA LG++R+++ Sbjct: 433 HYQPRFAGDKLPESPIATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGVLRMLM 492 Query: 518 ENKIDIP------LSQFIED---QNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + + I +QF D N + F RL + L + D D + A+L Sbjct: 493 NSPLSINDLLTTVAAQFPRDLLAANTVTEVADFMQARLAVLLQN-DYAQDTVAAVLAQRP 551 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-A 623 D L + D ++ + F + + KR+ +L K + L + LL E A Sbjct: 552 DRLDDLADKLQAVESFKKLPEAAALAAANKRVQNLL-----KKADAQLGAVQENLLQEDA 606 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E+ L+A +Q ++ + L ++ ++ FFD V+V DD V+ NRL+ Sbjct: 607 ERALFAATQALRPTVQAALAKHDFQAALTALAAVKPQVDAFFDNVMVMADDAAVKQNRLN 666 Query: 684 LLQYIKNIILIVINV 698 LL + ++ V ++ Sbjct: 667 LLNELSQLMNAVADI 681 >gi|89256651|ref|YP_514013.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica LVS] gi|115315064|ref|YP_763787.1| glycine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|156502794|ref|YP_001428859.1| glycyl-tRNA synthetase, subunit beta [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367963|ref|ZP_04983983.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica 257] gi|89144482|emb|CAJ79789.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica LVS] gi|115129963|gb|ABI83150.1| glycine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|134253773|gb|EBA52867.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica 257] gi|156253397|gb|ABU61903.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica FTNF002-00] Length = 694 Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 209/724 (28%), Positives = 380/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P K MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A +A Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ I++ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANIISKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|134093652|ref|YP_001098727.1| glycine tRNA synthetase subunit beta [Herminiimonas arsenicoxydans] gi|133737555|emb|CAL60598.1| glycine tRNA synthetase, beta subunit (Glycine--tRNA ligase beta chain) (GlyRS) [Herminiimonas arsenicoxydans] Length = 708 Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 220/727 (30%), Positives = 370/727 (50%), Gaps = 59/727 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L LK +G++ + + Q+ +P RL ++L ++ Sbjct: 13 NLLIELFVEELPPKALKKIGDAFAQLLQASLKTQGLLSTDSVLTQFASPRRLGVHLTQVA 72 Query: 61 PHSPEK-IEERLGP-RVG--AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-- 114 + +K + ++L P VG A KA L+ ++ + ++ D VL Sbjct: 73 EQADDKQVMQKLMPASVGLTADGKATPALLKKLSALGANESAVAGLKRESDGKAEVLFFN 132 Query: 115 --KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D L+ + + K+P PK M + +++RP ++ + A+ Sbjct: 133 SIVTGVTLADGLQKALEETLAKLPIPKVMGYQLADG-WETVNFVRPAHGLVALHGAD--- 188 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +I++ + GN T GHRF A P+ ++ D Y + + E V+ RR I+ Sbjct: 189 --VINVSALGLTAGNTTRGHRFEAGLDPVYIRDADSYAKQIATEGAVIASFAERRAEIVR 246 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 AS G L +ED+DLL+E+ GLVE V +G F++ +L +P+E + LT+K NQK Sbjct: 247 QLAAAASEAGDNLTPIEDEDLLDEVTGLVERPNVLIGQFEETFLAVPQECLILTMKANQK 306 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L+N F++VSNI+ +D + ++ GN RVV RL DA F+ +D+ Sbjct: 307 YFPLLDSKGNLSNKFLIVSNIRPADA-SLVIGGNERVVRPRLADAKFFFDQDRK------ 359 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 K L R+A LD VV+H K+GTQGER++R+R + + IA + DV Sbjct: 360 --------------KTLASRVAGLD--KVVYHNKLGTQGERIARVRAIAQAIAAKLGIDV 403 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 D A L+KADL T++V EFPELQG +G+ YA+ + DAIE+H KPR + + Sbjct: 404 QQADTAAQLAKADLLTDMVGEFPELQGIMGRYYALHDGLAENVADAIEDHYKPRFAGDTL 463 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P N + + V+LADKL+TL+ ++I + P+G KDP+ALRR LG+IR+++E K+DI +++ Sbjct: 464 PRNPVGMVVALADKLETLVGLFSIGQIPTGDKDPFALRRHALGVIRMLIEGKLDIGINEL 523 Query: 529 IEDQN-------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 I LI F DRL L ++ I+A+L + L + + Sbjct: 524 IAAAEQPFNKLAIEHRDALITFIFDRLANALREQGYSAQEIDAVLALQPQKLADVASRLA 583 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + KR+ IL +K E++ ++ P L AE L ++ Sbjct: 584 AVRAFAVLPEAPALAAANKRVGNIL---KKVEGEVTAKVDPALLKEAAEIALNQTLTTVK 640 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + Y +L ++ P++ FF+ V+VN DD +R+NRL LL + + + V Sbjct: 641 PQADTAFARGDYAASLQVLAALKTPVDAFFESVMVNADDAALRNNRLGLLATLHHAMNQV 700 Query: 696 INVQKIV 702 ++ K+ Sbjct: 701 ADISKLA 707 >gi|254369520|ref|ZP_04985531.1| glycine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] gi|157122474|gb|EDO66609.1| glycine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] Length = 694 Score = 320 bits (819), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 211/724 (29%), Positives = 375/724 (51%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKD------PKKGDVYLAVLRKP 116 + + E+ GP V K +G GL C ++ D KGD + Sbjct: 67 QQDVVIEKQGPLVSIAYK--EGEPTQVGLGFAKSCGVELDELERVATLKGDKLFYKTVQS 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L L D ++ Sbjct: 125 GQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A +A Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V++ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVTSGNQKVMSARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ I++ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANIISKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|328675923|gb|AEB28598.1| Glycyl-tRNA synthetase beta chain [Francisella cf. novicida 3523] Length = 694 Score = 320 bits (819), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 216/728 (29%), Positives = 375/728 (51%), Gaps = 69/728 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + AE L + LKE V + N + + +P RL +K L+ Sbjct: 7 DFLFELGTEELPPKALRSLAESLLASVESQLKEAKVSFGNTKWFASPRRLSFIIKDLAEA 66 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKD-------PKKGDVYLAVLRK 115 + + E+ GP V K DG GL C +K D PK ++ ++ Sbjct: 67 QEDIVVEKQGPLVSIAYK--DGEPTQVGLGFAKSCGVKFDELESVATPKGDKLFYKTVQS 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L+ I+ A++++P PK MRW ++ ++RP+ IL L D + Sbjct: 125 GQATVS-LLQEIIIKALKQLPIPKMMRWGDSN-----VEFVRPVHWILA-LYGND----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKATNITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAKDI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +++ D DL+EE+ +VE+ + F+K +L +P+E + ++ +QKCF + Sbjct: 234 AKENNYQVILDDDLVEEVCAIVEYPNAMLCDFNKDFLRVPQEALISAMEEHQKCFALLDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 294 EGDLVAHFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 ++ DL PL+Q + +L+ V F +K+G ++ RI +++A+L + D RA Sbjct: 334 -YDTDLKTPLEQLLPKLEY--VTFQSKLGNMYQKAQRIANTAQQLAELGNFDSQQAYRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPKTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILKDTSVDISLEKIIDISLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL---I 574 +I F DRLK + I D+ EAI N N ++ D + Sbjct: 511 YKKVNNLEFSADIKSEVISFCLDRLKNLYKEEGIAVDIFEAI---NNTNYHSVKDFAVRV 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-PQYLLLEAEKRLYAVISD 633 + + +F++S K + + S KR+ IL+ + ++ +I + + E E L I + Sbjct: 568 EAVTKFYNSDKAQSLIASNKRVANILS-KNATDKVYCYDIELAKAVANEYELALAYSIEE 626 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++ ++++ Y +LL + + I FF+ V+V +D +R+NRL+LL + + + Sbjct: 627 VAPDLEKYINNREYGYALELLTCLDKVISEFFENVMVIDEDVNIRENRLALLVNLHKMFI 686 Query: 694 IVINVQKI 701 + ++ K+ Sbjct: 687 GIADISKL 694 >gi|67459738|ref|YP_247362.1| glycyl-tRNA synthetase subunit beta [Rickettsia felis URRWXCal2] gi|75535872|sp|Q4UJU2|SYGB_RICFE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|67005271|gb|AAY62197.1| Glycyl-tRNA synthetase beta chain [Rickettsia felis URRWXCal2] Length = 664 Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 229/691 (33%), Positives = 352/691 (50%), Gaps = 67/691 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + EE I+ ++ + P R+ LY L + K E G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIF-EENEIFAKVQAFAGPRRITLYATHLPKVTLPKETEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 72 PSIDAPEAAINGFCKA---HNVSKLELSTKLINNQLYYFFVKKTEEREIKEILPEIIIEA 128 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E ++ L + NI YG Sbjct: 129 INKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----VLPLQFGHLTANNIAYG 178 Query: 192 HRFHAP--HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDL 249 HR+ ++V + Y L E V+L+ R I LA++ L + ED L Sbjct: 179 HRYRLTDNKKLEVTDFEDYKNKLSENHVILERTKREEIIKTGLLELANSRNLNIKEDNRL 238 Query: 250 LEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNI 309 +EE+ GL E+ V +G +K+L LP+E++ +++T+QK F +EG A F+ VSN Sbjct: 239 IEEVAGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKEGNFAQYFLFVSNG 298 Query: 310 QASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRM 369 + ++ +++GN +V++ARL DAL+F+K+ D++K L+ R+ Sbjct: 299 RFAN-AELVIKGNEKVLSARLSDALYFYKQ--------------------DIAKTLESRL 337 Query: 370 ARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVRE 429 +L+ V FHAK+G E+V R+ KI D + A L K+DL +E+V E Sbjct: 338 GKLEA--VTFHAKLGNLREKVERV----AKICSYTALDNTDLITAAKLCKSDLVSEMVGE 391 Query: 430 FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINF 489 FP+LQG +G YA + AI++H KP+G +NVP ++ ++LADK+D+L+ Sbjct: 392 FPDLQGIMGYYYAKHEGLGEEVAAAIKDHYKPQGLSDNVPGGNAAL-LALADKVDSLVGL 450 Query: 490 WAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------EDQNLIL-FF 538 E P+GS DPYALRR LGIIRIILENK+++ L+ I D++LI FF Sbjct: 451 MIAGEAPTGSGDPYALRRQALGIIRIILENKLELNLNDLIIFSLKLYGNSADKDLITSFF 510 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R K Y +D DI LI A L + NL+ + L EF G++ L + KR Sbjct: 511 EERAKFYFKNDYDIA--LINAAL---DLNLVDTKFKLDSLKEFLVEDAGKQLLNAYKRAS 565 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ ++I+ + + EK L+ V+ + S+ K Y++ +LL + Sbjct: 566 NII-----DGQKITGLVDASLFSTQPEKELFEVMQKISPQVTSSISDKDYNKALNLLSFL 620 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 PI FFD VLVN D ++ +NRLSLL I Sbjct: 621 LTPITSFFDNVLVNDPDPKIAENRLSLLHNI 651 >gi|148654007|ref|YP_001281100.1| glycyl-tRNA synthetase subunit beta [Psychrobacter sp. PRwf-1] gi|148573091|gb|ABQ95150.1| Glycine--tRNA ligase [Psychrobacter sp. PRwf-1] Length = 697 Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 222/733 (30%), Positives = 363/733 (49%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ SEE+P + + L + L+E + Y +++ Y P RL + ++G+S Sbjct: 1 MSTILFELGSEELPPKSLKPLRDSLKASVESQLQEANISYDSLKAYAAPRRLAIEIEGIS 60 Query: 61 PHSPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ E++ GP V A GK +A +GF + G+ I+ D KGD L Sbjct: 61 EKQPDRTEQKRGPAVKAAYDAEGKPTRAAEGFAKGLGIDASELITIETD--KGDYIGYEL 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L I A+ +P K MR + ++RP+K + +L+ +D Sbjct: 119 TIQGQATTELLPNIFQTALDNLPIAKRMRSGASRE-----EFVRPVKWL--VLMQDD--- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ID ++ + GN T GHR+H+P+PI + Y+ LE A V+ D + R+ I Sbjct: 169 QVIDATVQGLDAGNQTLGHRYHSPNPITIAHASDYLNVLENAKVIADFDRRQQLISERVT 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V + +DLL+E+ LV+ SF++++L +P+E + T++ +QK F Sbjct: 229 ALADEVNARAIVPEDLLDEVTSLVDLPVALRASFEERFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI +SNI++ D + +V GN +VV RL DA F+ +DQ Sbjct: 289 DSEGKLQPYFIFISNIESKDP-SQVVSGNEKVVRPRLADAEFFFLQDQK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---------KKIAQLI 404 + +++++ L R VF K+GT E+ RI L + IA Sbjct: 337 --QPLIEMAESLKNR---------VFQDKLGTIWEKSERIAKLAAFIAATFRQQNIAGYA 385 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D DVA RA +LSKADL + +V EFPELQG G YA L E + AIEE P+ Sbjct: 386 DIDVAQATRAAMLSKADLTSTLVGEFPELQGVAGTYYARLNGEPEAIAAAIEEQYLPKFS 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + I ++LAD++DTL+ + I++ P+GSKDP++LRR+ +G++RI++E ++ I Sbjct: 446 GDKLPQTAVGICLALADRIDTLVGIFGIDQAPTGSKDPFSLRRSAIGVLRILIEKQLPIN 505 Query: 525 LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L IE +I F + R + ++ + D I+A+L L Sbjct: 506 LVSLIEQAILNYQDKLPKAGETLTQVIDFINSRYRAMYTEQGVSVDTIQAVLAINPHMPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I +NEF S + KR+ ILA K ++ + L +AEK LY Sbjct: 566 DFDQRIHAVNEFRSLPQAATLAEINKRVANILA---KSEGQVGEAVDESLLTEDAEKALY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +S T + +Y QI L ++ P+ FFD V+VN +D ++ NRL+LL+ + Sbjct: 623 QALSTAKTEVAPLQAEAQYTQILQSLATLEVPLTGFFDNVMVNSEDEALKVNRLTLLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V +V ++ Sbjct: 683 RELFLTVADVGEL 695 >gi|323703326|ref|ZP_08114976.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum nigrificans DSM 574] gi|323531689|gb|EGB21578.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum nigrificans DSM 574] Length = 694 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 231/733 (31%), Positives = 350/733 (47%), Gaps = 78/733 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PAR A L + L+E+ ++Y ++ Y TP RL LY+K + Sbjct: 4 DFLLEIGIEEMPARFLAPALAQLKELTAKTLQEQRIVYGDIATYGTPRRLVLYVKDAAED 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +E GP A KAI GF+RS G+ ++ D ++ + +Y AV R+ Sbjct: 64 QAPLEKEVKGPAKKAAFDIDGNPTKAIQGFMRSQGV-SLEDLVVRHIGQVEYLY-AVKRE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R DVL I P I + +PK MRW + + RP++ +L + + + Sbjct: 122 AGRPTADVLAEICPALITGLHFPKPMRWGSLE-----MRFARPIRWLLALF-----GDDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +L + ITYGHRF + + + Y + +A VL+DP R+ I L Sbjct: 172 VPFELANLKSNRITYGHRFLTTGDLPIANPADYFDRIRKAYVLIDPVERKEVIRQQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+A G ++ D+DLL+EI +VEW GSFD+ YL LP ++ ++ +Q+ F Sbjct: 232 AAAEGGQVEMDEDLLDEITNIVEWPTALCGSFDRDYLKLPAAVLVTPMREHQRYFPVLGP 291 Query: 296 EGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L N FI V N G A + GN +V+ ARL DA F Sbjct: 292 DGQLLNKFIAVRN-----GTKAYLDIVTAGNEKVLRARLADAAFF--------------- 331 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 F DL KPL ++ L VVF +GT ++V RI L +A+L+ AD Sbjct: 332 -----FEEDLKKPLASKVDGLK--KVVFLEGLGTVADKVDRIGALADHLAELLGADEQQQ 384 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA +L+KADL T +V EFPELQG +G+EYA+ E+ +AI +H PR + + Sbjct: 385 EKIQRAALLAKADLVTNMVYEFPELQGVMGREYALRNGEDPDVAEAIFQHYLPRFAGDQL 444 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P +SLADK+DT++ +AI +P+GS DPYALRR LGI II E + + L Q Sbjct: 445 PNTLAGRVLSLADKMDTIVGCFAIGIQPTGSADPYALRRQALGICHIITEGNLHLSLKQM 504 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 IE + FF R+K + DR + +D +EA+L D++ Sbjct: 505 IEWAYQGYSAEVELKYTLPQVAGEIEEFFKQRIKGMMSDRGLSYDTVEAVLAVGFDDITD 564 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 L F + + R + KN I+ YL AE LY Sbjct: 565 AFARGAALTSFRDQPAFNALMTAFNRANNL-----AKN-ATGGAINEAYLEHPAEHELYR 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ +Q + + Y + +I P+ FF+QV+V V+D ++ NRL+LL+ + Sbjct: 619 QLTALTQKVQPLIQSRDYVAALREIAAIQAPLNEFFEQVMVMVEDERIKTNRLALLKNLV 678 Query: 690 NIILIVINVQKIV 702 ++ V + K+V Sbjct: 679 DLSKTVADFSKVV 691 >gi|134301720|ref|YP_001121688.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|134049497|gb|ABO46568.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis WY96-3418] Length = 694 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 209/724 (28%), Positives = 379/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P K MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A +A Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISKFFENVMVIDEDIKIRENRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|187931538|ref|YP_001891522.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|187712447|gb|ACD30744.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. mediasiatica FSC147] Length = 694 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 209/724 (28%), Positives = 380/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P K MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A +A Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S ++ GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVISGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIVVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|220936411|ref|YP_002515310.1| Glycine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] gi|219997721|gb|ACL74323.1| Glycine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] Length = 696 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 218/723 (30%), Positives = 351/723 (48%), Gaps = 62/723 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + + + + L E G+ ++ + P RL L + ++ Sbjct: 6 DLLIEIGTEELPPKALKGLRDAFAESVAAGLAEAGIGASKVQAFAAPRRLALLCRDVAAR 65 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP + A KA GF S G++ +++ D V+ V + Sbjct: 66 QPDQSMERRGPALAAAFDDNGNPTKAAQGFAASCGVKPEDLERLETDKGAWLVHRHV--E 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + ++ +IV A+ +P PK MRW + + ++RP+ ++ +L + + Sbjct: 124 PGKAAAALIPSIVERALAALPIPKRMRWGDSDA-----EFVRPVHWVVLLL-----GDAV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ++ ++ + G T GHRFH P + + Y L+ E V+ D E RR AIL Sbjct: 174 VEAEILGVKAGRETRGHRFHHPDTLFIAEPAAYAPLLQTEGRVMADFEARREAILGQVED 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + DLL+E+ LVEW G F+ ++L +P+E + T++ NQK F Sbjct: 234 AAQKLGGRALIEPDLLDEVTALVEWPSAIAGHFETRFLDVPQEALITTMQDNQKYFPVVD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI VSNI++ + + +GN RV+ R DA FW Sbjct: 294 QVGRLMPHFITVSNIESREP-ERVREGNERVIRPRFSDAEFFW----------------- 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 N D KPLD + L VVF K+GT E+ R+ L K +A L++ D RA Sbjct: 336 ---NQDRKKPLDSHLEALK--HVVFQRKLGTLFEKTERVAALTKHLAGLLNVDHGEALRA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF ELQG +G+ YA E A+EE PR +N+P + Sbjct: 391 AMLSKCDLQTHMVFEFTELQGTMGRYYAEHGGEPADVAQALEEQYWPRHAGDNLPETGVG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 ++LAD+LDTL+ +AI +KP+G+KDPY LRRA LG++RI++E ++D+ L I Sbjct: 451 KALALADRLDTLVGIFAIGQKPTGAKDPYGLRRAALGVLRILIERELDLDLLALIRAAAE 510 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ + +RL+ Y DR I D+ EA+L L ++ ++ Sbjct: 511 GYQGTDVNAAGAVASVFDYMMERLRAYYTDRGIGVDVFEAVLACRPLRPLDFDRRVRGVD 570 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F S + + + KRI IL +K + +I P +AE+ L+ + Sbjct: 571 HFRSLPEAQSLAAAHKRIHNIL---KKVEGALPEQIDPARFSEDAERALFDRLEALRGTA 627 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L ++ EP++ FFD V+V DD VRDNRL+LL + + L V ++ Sbjct: 628 LPLFTEGRYTEGLAALAALREPVDRFFDGVMVMADDAAVRDNRLALLNSLSGLFLEVADM 687 Query: 699 QKI 701 ++ Sbjct: 688 SRL 690 >gi|291288703|ref|YP_003505519.1| glycyl-tRNA synthetase, beta subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885863|gb|ADD69563.1| glycyl-tRNA synthetase, beta subunit [Denitrovibrio acetiphilus DSM 12809] Length = 687 Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 228/728 (31%), Positives = 352/728 (48%), Gaps = 67/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLEI SEEIPA A E L + G+ + ++ TP R ++ +KGL+ Sbjct: 1 MPDFLLEIGSEEIPAGFIGSACEYLKNDFTKRFTDAGIGFNDIESDGTPRRFYVSIKGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ + +GP G KA GF++S GL D K + ++G +YL+ + Sbjct: 61 EKQEDREDTIMGPPAAVAFDADGNLTKAGLGFVKSKGLS--EDSLTKAETERG-IYLSGV 117 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K K + D ++ I+ I+ +P+ KSM W F + RP+ L + + Sbjct: 118 KKTKGVPTRDFIEGILIDVIKSIPFRKSMHWGD-----KTFRYARPVHWFLALFGGD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I D+ I GN T GHR HA +V+ D Y L+EA V+ E R + + Sbjct: 170 --VISFDIDGIKSGNKTMGHRIHANEYFEVKDFDDYKAKLKEARVISSTEERISQVREQV 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + G ++ D+DLLE + GLVE+ MG F+++YL +P E++ ++K +QK F Sbjct: 228 AEIEKETGYKVDLDEDLLETVAGLVEYPVALMGEFEERYLDIPAEVLITSMKNHQKYFYV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L N FI VSN +D + G +RV+ ARL DA FW D+ Sbjct: 288 TDKDGNLVNKFIGVSNTVPNDP-QLVKTGYARVLRARLADAEFFWANDRK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 PL+ R+ L VV+ KIGT E++ R R L ++ ++ Sbjct: 337 ----------YPLENRVEELKK--VVYQEKIGTSYEKMERFRKLAVFFSENLNPSAKTDT 384 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA L KADL +E+V EFPELQG +G YA LQ EN AIEEH PR +++P + Sbjct: 385 ERAATLCKADLLSEMVYEFPELQGIMGHRYAKLQGENDVVAQAIEEHYLPRFAGDDLPES 444 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ADKLDT+ +AIN P+G++DPYALRR +GI+ I I L + I + Sbjct: 445 DTGAFISMADKLDTICGCFAINLIPTGNQDPYALRRGAIGILSTIKAKGYRIGLKEMIGE 504 Query: 532 QNLIL-----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +L F R + L I D +EA +D+++TI Sbjct: 505 SADLLSGYISFDKEKTVELVYDFIIQRYRQILAGEGIPADCVEAACEI-SDDIITIEAAA 563 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K L+E + + KRI IL KK+ S + E+ L +I+D Sbjct: 564 KALSESKQTKEFASIAAGYKRINNIL----KKSGHTSENYDEALFEDDYERELAKLIADK 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I + + + L + P++ FF+ V+V D ++R NRLSLL +K++ + Sbjct: 620 ADQINREVSEENFTMAMTQLLTFSAPVDNFFENVMVMAKDEKIRLNRLSLLNKLKSVFNM 679 Query: 695 VINVQKIV 702 + ++ KI+ Sbjct: 680 LGDLTKII 687 >gi|56707878|ref|YP_169774.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110670349|ref|YP_666906.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis FSC198] gi|224456956|ref|ZP_03665429.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|254370371|ref|ZP_04986376.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874693|ref|ZP_05247403.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|56604370|emb|CAG45397.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110320682|emb|CAL08780.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis FSC198] gi|151568614|gb|EDN34268.1| hypothetical protein FTBG_00131 [Francisella tularensis subsp. tularensis FSC033] gi|254840692|gb|EET19128.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|282159061|gb|ADA78452.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis NE061598] Length = 694 Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 208/724 (28%), Positives = 378/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P K MRW +++ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPISKMMRWGSSN-----VEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A +A Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDNDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ K+ ++E++ + E E L I + Sbjct: 572 KFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRKNRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|170724382|ref|YP_001758408.1| glycyl-tRNA synthetase subunit beta [Shewanella woodyi ATCC 51908] gi|238688635|sp|B1KCY4|SYGB_SHEWM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169809729|gb|ACA84313.1| glycyl-tRNA synthetase, beta subunit [Shewanella woodyi ATCC 51908] Length = 689 Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 226/718 (31%), Positives = 355/718 (49%), Gaps = 69/718 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L++ + +++ + + P RL + L Sbjct: 5 NLLIEVGTEELPPKALRKLAESFVSNFTDELEKAELSFESAQWHAAPRRLAFTVNQLVLA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL----A 111 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 65 QADKVVEKRGPAIAQAFDADGNPTKAAMGWARGNGISVEQAERLKTD--KGEWLLHQAKV 122 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V + K LI D+ + A+ K+P PK MRW T+ + +IRP+ ++ +L +E Sbjct: 123 VGVETKSLINDMAQR----ALDKLPIPKPMRWGTSKT-----QFIRPVHTVTMLLGSE-- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILN 230 +++ +L + + GHRF ++ D+Y+ L E+ MVL D E R+ I Sbjct: 172 ---LVEGELLGVKSARVIRGHRFMGKKSFELDHADNYLSALKEQGMVLADYEARKAIIKT 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G + DLLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLEDDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 289 PVFDKAGQLLPHFIFVTNIESKDP-QVIISGNEKVVRPRLADAEFF-------------- 333 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 F D + L+ R+A L+ VVF ++GT +RV RI L IA IDAD Sbjct: 334 ------FETDKKQTLESRLASLET--VVFQKQLGTIKQRVERISQLAGYIAASIDADSDE 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT Sbjct: 386 ASRAGLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALAEQYKPKFSGDTVPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----- 525 IS+ V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L Sbjct: 446 APISVCVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIA 505 Query: 526 -SQFIEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +Q + NL + FF R + + D+ + D+I A+L IK Sbjct: 506 KAQELHGDNLTNDKAAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFDSRIK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F S + + KR+ ILA K E++ +IS + L+ AEK L +++ Sbjct: 566 AVAHFRSLEQASALAAANKRVSNILA---KVEGELATDISSELLVENAEKALAEKLNELQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L Sbjct: 623 PQLAPLFAAANYQQALSLLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFL 680 >gi|62261390|gb|AAX77986.1| unknown protein [synthetic construct] Length = 729 Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 208/724 (28%), Positives = 378/724 (52%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 33 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 92 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 93 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 151 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P K MRW +++ ++RP+ +L L D ++ Sbjct: 152 QATV-NLLQEIITKALKQLPISKMMRWGSSN-----VEFVRPVHWVLA-LYGND----VV 200 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A +A Sbjct: 201 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENIA 260 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 261 KENDYQVVLDNDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 320 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 321 GDLVANFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF-------------------- 359 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 360 YDTDLKTSLEQLLPKLEH--VTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 417 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 418 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAAC 477 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 478 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 537 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 538 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 597 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ K+ ++E++ + E E L I + Sbjct: 598 KFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELA-KAAANEYELALAYSIEEVAAD 656 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R NRL+LL + + + + + Sbjct: 657 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRKNRLALLVNLHKMFIGIAD 716 Query: 698 VQKI 701 + K+ Sbjct: 717 ISKL 720 >gi|300115242|ref|YP_003761817.1| glycyl-tRNA synthetase subunit beta [Nitrosococcus watsonii C-113] gi|299541179|gb|ADJ29496.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus watsonii C-113] Length = 691 Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 230/722 (31%), Positives = 356/722 (49%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + K +E L L L+ G+IY +++ Y P RL ++++ L+ Sbjct: 6 DLLIEIGTEELPPKALRKLSESLLQELGRGLQAAGLIYADLKGYGAPRRLAVWVQALTVS 65 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 PE++ ER GP + A GK A GF S G+ + +K + KG + R+ Sbjct: 66 QPEQVLERRGPALAAAVNEEGKPTAAARGFAGSCGVPVEALESLKNE--KGAWLVYRQRR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L TI+ + +P PK MRWS +IRP+ ++ + E++ Sbjct: 124 QGAPTRELLPTILAQVLHGLPIPKPMRWSDLPG-----EFIRPVHWLVLLF-----GEEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I L + G T+GHRFH P + + Y LE E VL D RR AI Sbjct: 174 IPATLLGVQAGRETWGHRFHHPESLYLTEPAVYASLLETEGKVLADFTARREAIYAQVVA 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + ++ LL+E+ GLVEW G FD+ +L LPEE++ T++ +QK F + Sbjct: 234 AAQQMGGKALIEEALLDEVTGLVEWPMALAGRFDEDFLKLPEEVLIATMQDHQKYFPVQD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L CFI V NI+ S A+V+GN RV+ RL DA F+ D+ KES Sbjct: 294 EQGHLLPCFITVCNIE-SQCPEAVVEGNERVIRPRLTDAAFFYTTDR---------KES- 342 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L R RL + F K+GT ER R+ L IA+ I + RA Sbjct: 343 ----------LVSRRERLK--KITFQEKLGTVFERTERLAKLAGHIAKDIGGNGDWARRA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPELQG +G+ YA+ E +A+ E PR + +P Sbjct: 391 GLLSKCDLVTEMVTEFPELQGSMGRYYALHDKEPQEVAEALREQYLPRFAGDVLPCTAPG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK--IDIP-------- 524 +SLAD+LDTL+ + PSG KDPY LRRA LG++RII+E++ +D+P Sbjct: 451 QALSLADRLDTLVGLFGTGTPPSGDKDPYGLRRAALGVLRIIIESELALDLPSLLKLACE 510 Query: 525 -----LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L++ ++ + +RL+ Y + R D IEA+L D L +K + Sbjct: 511 TYHDRLTENNTAAHVYAYLLERLRGYYLEAGFRPDEIEAVLAVRPDQPLDFDRRLKAVAS 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL K + +I L AE+ L A + + Sbjct: 571 FRKLPEAESLSAANKRIRNIL---RKSGERLPAQIESDLLQDSAEQTLAAQMYGLEREVV 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L + ++ FFD+V+V V+D ++R NRL+LL+ ++ + L V ++ Sbjct: 628 PLLERQDHRATLTALAGLRSAVDQFFDEVMVMVEDPKLRANRLALLERLQTLFLQVADIS 687 Query: 700 KI 701 ++ Sbjct: 688 RL 689 >gi|90415373|ref|ZP_01223307.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2207] gi|90332696|gb|EAS47866.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2207] Length = 693 Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 219/724 (30%), Positives = 359/724 (49%), Gaps = 61/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+EI +EE+P ++ + +E ++ + LKE+ + + M + P RL + +K L Sbjct: 4 DFLVEIGTEELPPKVLRQLSETVASGITQRLKEQQLGFNQMTAFAAPRRLAVLIKDLDEQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +P++ GP + G KA + F R GL+ ++ ++ + D Sbjct: 64 TPDQDIVSWGPPLKVAFDADGQPTKAAEAFARKNGLEVAVLAELVENDGQQDKLCVRQSI 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 E +L ++ ++ +P PK MRW + ++RP++ + + E Sbjct: 124 SGSNTEALLGEVINQSLAALPIPKPMRWGRSRQ-----EFVRPVQWAVVLFGNE-----T 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +D+ + GN + GHRFH+ I++ S Y L +A V++D RR I Sbjct: 174 VAIDILGVTSGNHSRGHRFHSTGDIQITSPASYRDTLLDAFVMVDFAERRELIRQGVMAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + V D+ LLEE+ L EW MG F++ +L +P E + ++ +QK F Sbjct: 234 AKTANGQAVIDESLLEEVTSLNEWPVPLMGRFEEHFLEVPAEALVSSMAQHQKYFHVVDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 L FI V+NI ++D ++ GN RV+ RL DA F Sbjct: 294 NNKLLPLFITVANIASADP-QQVINGNERVIRPRLADAAFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +N DL LD R R + +VF +K+GT ++ +R+ L K +A + ADV RA Sbjct: 334 -YNTDLKTTLDAR--RETLRKIVFQSKLGTVYDKTARVSELAKILAPFVGADVTAAGRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK+DL +E+V EF +LQG +G+ YA+ E+ + DA+ E PR + +P + Sbjct: 391 ELSKSDLVSEMVGEFDDLQGVMGRYYALNDGEDPAVADALLEQYLPRFAGDAIPASATGA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS--------- 526 ++LAD+LDTL+ ++I ++PSGS+DP+ALRRA+LGI+RII+E IDI L Sbjct: 451 ALALADRLDTLVGIFSIGQQPSGSRDPFALRRASLGILRIIIERNIDIDLKVAIAAAAQQ 510 Query: 527 ---QFIEDQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + D NL + + +RLK + D +I ++ ++ E N L I +K ++EF Sbjct: 511 LALTEVLDGNLEQVLTYVTERLKSWYRDENITPEVFASVAAMELSNPLDINARVKAVDEF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHI 638 + + + KR+ ILA K E +E L E AE +L A I I Sbjct: 571 SRAVEAVALASANKRVLNILA----KQGETKVEAKVDSTLFEDPAEIQLAAEIERLRLLI 626 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ + Y + L ++ EP++ FFD VLV D+ EVR NRL+LL ++ + L V ++ Sbjct: 627 APLVEERNYMGVLAALATLREPVDTFFDGVLVMADNPEVRANRLALLHSLRQLFLNVADI 686 Query: 699 QKIV 702 +V Sbjct: 687 SHLV 690 >gi|77163904|ref|YP_342429.1| glycine--tRNA ligase [Nitrosococcus oceani ATCC 19707] gi|254435742|ref|ZP_05049249.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus oceani AFC27] gi|76882218|gb|ABA56899.1| glycyl-tRNA synthetase beta chain [Nitrosococcus oceani ATCC 19707] gi|207088853|gb|EDZ66125.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus oceani AFC27] Length = 691 Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 229/722 (31%), Positives = 354/722 (49%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + K +E L L L+ G+IY +++ Y P RL ++++ L+ Sbjct: 6 DLLIEIGTEELPPKALRKLSESLLQELSHGLQAAGLIYGDLKGYGAPRRLAVWVQALTVS 65 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 PE++ ER GP + A GK A GF S G+ + +K + KG + R+ Sbjct: 66 QPEQVLERRGPALAAAFNEEGKPTAAARGFAGSCGVPVEALESLKNE--KGAWLVYRQRQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L I+ A+Q +P PK MRWS +IRP+ ++ + E++ Sbjct: 124 QGAPTRELLPAILAQALQALPIPKPMRWSDLPG-----EFIRPVHWLVLLF-----GEEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I L + G T GHRFH P P+ + Y LE E VL D RR AI Sbjct: 174 IPATLLGVQAGRETQGHRFHHPEPLYLTEPAAYATLLETEGKVLADFAVRREAIYTQVVA 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + ++ LL+E+ GLVEW G FD +L LP E++ T++ +QK F + Sbjct: 234 AAQQMGGKALIEEALLDEVTGLVEWPVALAGQFDGDFLKLPAEVLIATMQDHQKYFPVQD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L CFI V NI+ S +V+GN RV+ RL DA F+ D+ KES Sbjct: 294 EQGHLLPCFITVCNIE-SQRPEVVVEGNERVIRPRLTDAAFFYATDR---------KES- 342 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L R RL + F K+G+ ER R+ L IA+ I + RA Sbjct: 343 ----------LASRCERLK--KITFQEKLGSVFERTERLAKLAWHIAKDIGGNGDWAKRA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPELQG +G+ YA+ +E +A+ E PR + +P Sbjct: 391 GLLSKCDLVTEMVTEFPELQGSMGRYYALHDHEPQEVAEALREQYLPRFAGDVLPRTATG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 +SLAD+LDTL+ + I PSG KDPY LRRA LG++RII+E+ + + L ++ Sbjct: 451 QALSLADRLDTLVGLFGIGAPPSGDKDPYGLRRAALGVLRIIIESGLALDLPSLLKRACE 510 Query: 531 -------DQNLILFFH----DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++N + H +RL+ Y + R D IEA+L D L +K + Sbjct: 511 TYNDRLTEKNTAVQVHAYLLERLRGYYLEAGFRPDEIEAVLAVRPDQPLDFDRRLKAVAS 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL K ++ +I L AE+ L + + Sbjct: 571 FRKLPEAESLSAANKRIRNIL---RKSGEKLPAQIESDLLQDPAEQTLATQMYSLEREMM 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L + ++ FFD+V+V V+D ++R NRL+LL ++ + L V ++ Sbjct: 628 PLLERQDHRATLTALAGLRGAVDQFFDEVMVMVEDPKLRANRLALLARLQTLFLQVADIS 687 Query: 700 KI 701 ++ Sbjct: 688 RL 689 >gi|154686786|ref|YP_001421947.1| glycyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens FZB42] gi|154352637|gb|ABS74716.1| GlyS [Bacillus amyloliquefaciens FZB42] Length = 679 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 223/719 (31%), Positives = 360/719 (50%), Gaps = 65/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR H + L L G L E+ + + ++ + TP RL +Y+K ++ Sbjct: 5 DLLLEIGLEEMPARFLHDSMVQLGEKLTGWLAEKNIAHGEVKLFNTPRRLAVYIKDVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF + G + D IK V++ + Sbjct: 65 QADIQEEAKGPAKKIALDADGNWTKAAIGFSKGQG-AGVDDLYIKDVNGTEYVFVQKFQA 123 Query: 116 PKRLIEDVLKTIVPVA---IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + KT++P I + +PK+MRW T +IRP+K I+ + Sbjct: 124 GQET-----KTLLPQLENLIAGMHFPKNMRWGTQD-----LRYIRPIKWIIALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + +I + + G T GHRF + V + Y + L+E V+ DP+ R+ I + Sbjct: 169 KDVIPFKITNVETGRNTQGHRFLG-QEVSVDAPSSYEKLLKEQSVIADPKERKQMIQSQL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ + D+DLL E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 228 DALAAEKKWNIPIDEDLLNEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 288 KDENGNLLPHFITVRNGN-SHAIENVARGNEKVLRARLSDAAFFYKEDQ----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 K N+D + + +L+ ++VFH ++G+ G++V R+ + K+A + AD Sbjct: 336 ---KLNID------ENVKKLE--NIVFHEELGSLGDKVRRVTAIAGKLAVRLKADEQTQK 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR VP Sbjct: 385 LVKRAAEISKFDLVTHMIYEFPELQGVMGEKYARMLGEDDAVAAAVNEHYMPRAAGGEVP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V+LADKLDT+ +F++I+ P+GS+DPY LRR GI+ I+++ I + + Sbjct: 445 STFTGAVVALADKLDTIASFFSIDVIPTGSQDPYGLRRQASGIVSILIDRNWGISFKELL 504 Query: 530 -----EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 E +N +L FF RLK L+ DIRHD+IEA+L V + L + + Sbjct: 505 SLTETEKENELLDFFTQRLKYVLNAEDIRHDVIEAVLDSTELEPYAAVHKARVLEKHLGT 564 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 F +A+ + ++++I +K S +I+P E EK+L+ + ES Sbjct: 565 P---GFKETAESLGRVISISKKGE---SRDINPDLFENEQEKKLFDAYQKTKDSVAESFA 618 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y Q +L + EPIE +F+ +VN DD ++ NRL+ + + ++I N+ ++ Sbjct: 619 SKNYEQALAVLSGLKEPIEDYFNHTMVNADDEALKTNRLAQMTALADVIKSFANMNHLI 677 >gi|91206174|ref|YP_538529.1| glycyl-tRNA synthetase subunit beta [Rickettsia bellii RML369-C] gi|157826524|ref|YP_001495588.1| glycyl-tRNA synthetase subunit beta [Rickettsia bellii OSU 85-389] gi|122425155|sp|Q1RGS4|SYGB_RICBR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229558573|sp|A8GUQ4|SYGB_RICB8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91069718|gb|ABE05440.1| Glycyl-tRNA synthetase beta chain [Rickettsia bellii RML369-C] gi|157801828|gb|ABV78551.1| glycyl-tRNA synthetase subunit beta [Rickettsia bellii OSU 85-389] Length = 658 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 232/688 (33%), Positives = 354/688 (51%), Gaps = 71/688 (10%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS-PEKIEERL 71 IPA +Q A E I + EE I+ ++ + P R+ LY L + P++IE + Sbjct: 13 IPAFIQKDAEEGYLSIFTKIF-EENEIFAKIQVFSGPRRITLYATHLPKVTLPKEIEIK- 70 Query: 72 GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PKRLIEDVLKTIVPV 130 GP A + AI+GF ++ +S ++ +Y ++K +R I+++L I+ Sbjct: 71 GPSTEAPEAAINGFCKA---HNVSKLELSTKLINNQLYYFYIKKVEERQIKEILPEIIVE 127 Query: 131 AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITY 190 AI K W KSM W + WIRPL++ILCI +E I+ L + N+T+ Sbjct: 128 AINKYSWAKSMFWGNYN-----IKWIRPLRNILCIFDSE-----ILPLQFGHLAANNVTF 177 Query: 191 GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 GHR ++V + Y L E V+L+ R I A++ L + ED L+ Sbjct: 178 GHRLTDNKKLEVTDFEDYKTKLTENYVILERLKREEIIKTSLLEQANSHNLTIKEDLRLI 237 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 EE+ GL E+ V G+ +K+L LP+E++ +++T+QK F R A F+ VSN Q Sbjct: 238 EEVAGLSEFPVVLCGAIPQKFLELPKEVLISSMRTHQKYFCLFDRSENFAPYFLFVSNGQ 297 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 ++ +VQGN +V++ARL DAL+F+K+ D+SK L+ + Sbjct: 298 FAN-SKLVVQGNEKVLSARLSDALYFYKQ--------------------DISKTLEANLE 336 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 +L V FH K+G+ E+V RI I + ID D + A L K+DL +E+V EF Sbjct: 337 KLAA--VTFHTKLGSLKEKVERIT----NICKYIDPDNKDLITAAKLCKSDLVSEMVGEF 390 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G YA +N N AI +H KP+G ++VP ++ +++ADKLD+L+ Sbjct: 391 PELQGIMGYYYAKHENLNEEIAVAIRDHYKPQGLSDSVPVGNAAL-LAIADKLDSLVGLM 449 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----------DQNLIL-FFH 539 E P+GS DPYALRR LGIIRII+ENK+++ L+ I+ D++LI+ FF Sbjct: 450 IAGEAPTGSGDPYALRRQVLGIIRIIIENKLELNLNSLIDFSLKLYSSDKDKDLIISFFE 509 Query: 540 DRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 +R K Y ++ DI LI A+L + NL I + L EF G++ L + KR Sbjct: 510 ERAKFYFKNEYDI--SLINAVL---DLNLANIKFKLDALKEFLEKEDGKQLLNAYKRASN 564 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 IL ++ I + P + EK L+ V I + K Y + +LL ++ Sbjct: 565 ILG-----SQNIDGAVEPSLFNTQPEKELFEVTQKLSLQIVD----KDYDKALNLLQTLL 615 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 PI FFD VLVN D ++ NRL +LQ Sbjct: 616 TPITSFFDNVLVNDSDPKIAKNRLLILQ 643 >gi|292572510|gb|ADE30425.1| Glycyl-tRNA synthetase beta chain [Rickettsia prowazekii Rp22] Length = 664 Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 234/693 (33%), Positives = 352/693 (50%), Gaps = 75/693 (10%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKI----E 68 IPA MQ A E I + EE I+ ++ + P R+ L+ + H P+ I E Sbjct: 13 IPAFMQKNAEEGYLKIFTKIF-EENEIFAKVQVFAGPRRITLH----ATHVPKVILPKEE 67 Query: 69 ERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTI 127 E GP + A + AI+GF ++ +S + + +Y ++K K R +++L I Sbjct: 68 EIKGPSIEAPEIAINGFCKA---HNVSKLDLSTKLRNNKLYYFFVKKTKQRETKEILPKI 124 Query: 128 VPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGN 187 + AI K W KSM W WIRPL++ILCI E I+ L + N Sbjct: 125 IIDAINKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNN 174 Query: 188 ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 ITYGHR +++ ++Y L E V+L+ R I LA+A L + +D Sbjct: 175 ITYGHRLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDV 234 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 L+EE+ GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V Sbjct: 235 CLIEEVTGLSEFPVVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVI 294 Query: 308 NIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQ 367 N + + I+QGN +V++ARL DAL+F+K D++K L+ Sbjct: 295 NGRFVN-TELIIQGNEKVLSARLADALYFYKN--------------------DIAKTLES 333 Query: 368 RMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIV 427 R+ +L V+FH K+G+ E+V RI I + I D + A L K+DL +++V Sbjct: 334 RLDKLK--SVIFHTKLGSLKEKVDRI----TDICRYIAPDNIDLIMAAKLCKSDLVSDMV 387 Query: 428 REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLI 487 EFP+LQG +G YA + N AI +H KP+G +NVP+ ++ ++LADKLD+L+ Sbjct: 388 GEFPDLQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGNATL-LALADKLDSLV 446 Query: 488 NFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------------NL 534 + E P+GS DPYALRR LGIIRII+ENK++I I ++ Sbjct: 447 GLIIVGETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSV 506 Query: 535 ILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA 593 I FF +R K Y +D DI LI A+L + NL+ + L EF G++ L + Sbjct: 507 ISFFEERAKFYFKNDYDIT--LINAVL---DLNLVDTKFKLDTLKEFLVQDVGKQLLNAY 561 Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KR+ I+ N++I+ + + EK L+ VI I + +K Y + +L Sbjct: 562 KRVSNIMG-----NQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNL 616 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L S+ +PI FFD VLVN D ++ NRLSLLQ Sbjct: 617 LSSLLKPITSFFDNVLVNDSDPKIAQNRLSLLQ 649 >gi|11467977|sp|Q9ZCB1|SYGB_RICPR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 665 Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 234/693 (33%), Positives = 352/693 (50%), Gaps = 75/693 (10%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKI----E 68 IPA MQ A E I + EE I+ ++ + P R+ L+ + H P+ I E Sbjct: 14 IPAFMQKNAEEGYLKIFTKIF-EENEIFAKVQVFAGPRRITLH----ATHVPKVILPKEE 68 Query: 69 ERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTI 127 E GP + A + AI+GF ++ +S + + +Y ++K K R +++L I Sbjct: 69 EIKGPSIEAPEIAINGFCKA---HNVSKLDLSTKLRNNKLYYFFVKKTKERETKEILPKI 125 Query: 128 VPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGN 187 + AI K W KSM W WIRPL++ILCI E I+ L + N Sbjct: 126 IIDAINKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNN 175 Query: 188 ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 ITYGHR +++ ++Y L E V+L+ R I LA+A L + +D Sbjct: 176 ITYGHRLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDV 235 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 L+EE+ GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V Sbjct: 236 CLIEEVTGLSEFPIVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVI 295 Query: 308 NIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQ 367 N + + I+QGN +V++ARL DAL+F+K D++K L+ Sbjct: 296 NGRFVN-TELIIQGNEKVLSARLADALYFYKN--------------------DIAKTLES 334 Query: 368 RMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIV 427 R+ +L V+FH K+G+ E+V RI I + I D + A L K+DL +++V Sbjct: 335 RLDKLK--SVIFHTKLGSLKEKVDRI----TDICRYIAPDNIDLIMAAKLCKSDLVSDMV 388 Query: 428 REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLI 487 EFP+LQG +G YA + N AI +H KP+G +NVP+ ++ ++LADKLD+L+ Sbjct: 389 GEFPDLQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGNATL-LALADKLDSLV 447 Query: 488 NFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------------NL 534 + E P+GS DPYALRR LGIIRII+ENK++I I ++ Sbjct: 448 GLIIVGETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSV 507 Query: 535 ILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA 593 I FF +R K Y +D DI LI A+L + NL+ + L EF G++ L + Sbjct: 508 ISFFEERAKFYFKNDYDIT--LINAVL---DLNLVDTKFKLDTLKEFLVQDVGKQLLNAY 562 Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KR+ I+ N++I+ + + EK L+ VI I + +K Y + +L Sbjct: 563 KRVSNIMG-----NQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNL 617 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L S+ +PI FFD VLVN D ++ NRLSLLQ Sbjct: 618 LSSLLKPITSFFDNVLVNDSDPKIAQNRLSLLQ 650 >gi|258593379|emb|CBE69718.1| glycine tRNA synthetase, beta subunit [NC10 bacterium 'Dutch sediment'] Length = 689 Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 219/725 (30%), Positives = 365/725 (50%), Gaps = 66/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI EEIP+ A +DL+ L +E + + +R + TP RL L+++ L + Sbjct: 4 DLLFEIGIEEIPSGYLTPALKDLATQARRLFEEHRIAFTGVRTFGTPRRLTLHVERLDQN 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E +GP A KA GF R G+ + ++K + V A++ + Sbjct: 64 QGDLVREVVGPSRAAAFDQEGRPTKAALGFARGQGV-PVEQLRVKTLDRGEYVVAAIVEQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 RL +++L ++P I + +PKSMRW AF ++RP++ ++ + ++ Sbjct: 123 GARL-DEILPVVLPRLITSLSFPKSMRWGQ-----GAFRFVRPIRWLVALYSG-----RV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ + GN T GHRF + I+V++ YI LEE V+++ RR + A Sbjct: 172 IPFEIDGVISGNKTCGHRFLSRGQIRVRNFQDYIEKLEERYVIVNQHRRRELVTRLAKEA 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ VG + V D +L+E + LVE+ G F+++YL LP E+I ++ +Q+ F Sbjct: 232 AAKVGGKPVFDDELVEMVASLVEYPTAVCGGFEQEYLSLPREVIMTPMRKHQRYFPVTDD 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ +SN++A D G I GN RV+ ARL+DA F+ D+ Sbjct: 292 AGKLLPYFVTISNMKAKDMGL-IRAGNERVLRARLKDAAFFFTEDRR------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRA 414 L+L + + Q + + F ++GT E+V R+ L +A+ + +A +A Sbjct: 338 ---LELHERVPQ------LRGITFQERLGTMLEKVGRLTELTAYLAEQVAPHLAHDACQA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V+EFP LQG +G+EYA L E AIEEH PR + +P + + Sbjct: 389 AQLCKADLVTTMVKEFPSLQGVMGREYAQLSGEPAVVAQAIEEHYLPRFSGDRLPESLVG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V +AD+LDT+ + I P+GS+DPYALRR GII+I+L ID+PLSQ I Sbjct: 449 ALVGIADRLDTICGCFGIGLIPTGSEDPYALRRHAQGIIQILLNAGIDLPLSQPIYKSLD 508 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 Q ++ F RL+ L +R + DL+EA L + + + + L Sbjct: 509 LLSDRVTLPRERVAQEVMEFLAARLQAILMERGVPGDLVEAALSVDAERVSDAGKRAEAL 568 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F A + + KR+ +IL ++ S + P+ + AE+ L+ + Sbjct: 569 ATFRREADFTELAAAFKRVIRILP------KDFSKPVDPRRFVSSAERALHGEAATLRAE 622 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + M Y + L+ +I +++FF++VLV V+DR+++DNRL++L+ + ++ + N Sbjct: 623 TEPLMQSGDYVRALQLIAAIRPIVDMFFEEVLVMVEDRDLQDNRLAILKEVADLFCGIAN 682 Query: 698 VQKIV 702 KI+ Sbjct: 683 FSKIM 687 >gi|306820784|ref|ZP_07454409.1| glycyl-tRNA synthetase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551174|gb|EFM39140.1| glycyl-tRNA synthetase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 687 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 232/735 (31%), Positives = 376/735 (51%), Gaps = 87/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLE+ +EEIPAR + + L LKE + + + TP R +++ LS Sbjct: 4 DLLLELGTEEIPARFISSTKKSMKSFLEKRLKELRISFDTINIKSTPRRFSIFINKLSDK 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E +EE GP KA+ GFL+S + +I D + K+ + VY V +K Sbjct: 64 QTESVEEIKGPSRKIAFDENNNPSKALAGFLKSKNV-SIDDIKFVKNGNEEYVY--VEKK 120 Query: 116 PKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + L + LK I I + +PK MRW + +IRP++ ILC+ E Sbjct: 121 LESLDTKSYLKEIFEQMIDNLSFPKPMRWGG-----NKIKFIRPIRWILCLYGNE----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + +L++ + N+T GHRF I+V S++ Y + LEE V+LD E RR I + + Sbjct: 171 VPELEMFNLKASNLTRGHRFLGKSYIEVPSIEEYEKILEENYVILDDEKRRELIRSQITK 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A + +ED+DLLEE+ +VE+ G F ++YL LP+E I +K +Q+ F Sbjct: 231 IAEDLNSIYMEDEDLLEEVNYIVEYPTALYGQFKEEYLKLPKETIITPMKEHQRYFPVLD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQ----GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L N FI V N G +++ GN +V+ ARL DA F+++D Sbjct: 291 KSGNLVNKFITVRN-----GNDYMIENVRKGNEKVLDARLSDAKFFYEQDT--------- 336 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 SK L++ + RL+ +V+H K+GT +++ R++ + K A+L++AD + Sbjct: 337 -----------SKKLEEYVERLNT--IVYHEKLGTMHDKMQRLQSISKSFAKLLNADESD 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L KADL T +V EF ELQG +G YA + E DAI EH PR + V Sbjct: 384 AQRAAYLCKADLTTSMVFEFTELQGIMGYYYANISGEKEEISDAIVEHYLPRFSGDEVAK 443 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +K+ I +SLADK DT+ F+A+ KP+GS+DPYALRR LGI+ ++ENK+ + + + I+ Sbjct: 444 SKLGIVLSLADKFDTMAGFFAVGIKPTGSQDPYALRRTALGILNTLIENKLLLSMEELIK 503 Query: 531 ----------DQNL-------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + NL + F RLK L D+ IR+D+++A++ D++ ++ Sbjct: 504 VALNEYKDKIEFNLEEVYLEILDFMKLRLKNILLDKKIRYDVVDAVI----DDISSVFRT 559 Query: 574 IK---HLNEFFSSAKGEKFLLSAKRIFQI---LAIEEKKNREISLEISPQYLLLEAEKRL 627 + L ++ S++ L + R++ I +A EK I Q EK++ Sbjct: 560 FEKAVQLEKWLSNSDNIPNLNTFIRVYNISKEIATNEK--------IDTQLFEQNEEKQV 611 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y+ ++ +Y + + L S+ + I FFD V++ V+D ++R+NRL L+ Sbjct: 612 YSKYLKILPVVENLNSELKYIESLNELSSMTKDINDFFDNVMIMVEDDKIRNNRLLLVNA 671 Query: 688 IKNIILIVINVQKIV 702 +K++I + + KIV Sbjct: 672 LKSMIFEIADFSKIV 686 >gi|292490371|ref|YP_003525810.1| glycyl-tRNA synthetase subunit beta [Nitrosococcus halophilus Nc4] gi|291578966|gb|ADE13423.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus halophilus Nc4] Length = 691 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 230/722 (31%), Positives = 355/722 (49%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + K +E L+ L L+ G+ Y +++ Y P RL ++++ L+ Sbjct: 6 DLLIEIGTEELPPKALRKLSESLTQELSQRLQAAGLAYGSLKGYGAPRRLAVWVQELTAS 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ ER GP + G A GF RS G+ D + +KG + R+ Sbjct: 66 QPDRVLERRGPALTAAFDDEGRATAAAQGFARSCGVPV--DELESLESEKGAWLVHRQRR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L I+ ++Q +P PK MRW+ + +IRP+ L +L ++A Sbjct: 124 QGAPTRELLPDILAQSLQALPIPKRMRWNDL-----SVEFIRPVH-WLVLLFGDEA---- 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I +L + T GHRFH P P+ + Y LE E VL D RR AI Sbjct: 174 IPAELLGVQADRETRGHRFHHPAPLYLAEPAAYGPLLETEGKVLADFSVRREAIYAQVVE 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG E + + LL+E+ GLVEW G F+ +L LPEE++ T++ +QK F R Sbjct: 234 AAKKVGGEALVEDALLDEVTGLVEWPVALAGRFEPDFLQLPEEVLIATMQDHQKYFPVRD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI VSNI+ S+ A+V+GN RV+ RL DA F+ D+ KES Sbjct: 294 GQGHLLPYFITVSNIE-SEQPEAVVEGNERVIRPRLADAAFFYATDR---------KES- 342 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L R +L + F K+G+ ER R+ L + IA I + +RA Sbjct: 343 ----------LASRCGKLK--KITFQEKLGSVFERTERLAQLARSIAISIGGNGDWAERA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPELQG +G+ YA+ +E +A+ E PR + +P Sbjct: 391 GLLSKCDLVTEMVTEFPELQGIMGRYYALRDDEPAEVAEALREQYLPRFAGDKLPGTPTG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI----------- 523 +SLAD+LDTL+ + I E PSG +DPY LRRA LG++RII+E ++ + Sbjct: 451 QALSLADRLDTLVGLFGIGEPPSGDRDPYGLRRAALGVLRIIIEAELGLDLRLLLERGCQ 510 Query: 524 PLSQFIEDQNLILFFHD----RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + N HD RL+ Y + R D IEA+L + +K + Sbjct: 511 AYGGRLTESNTAAQVHDYLLERLRGYYLEAGFRPDEIEAVLVLKPGRPWDFDRRLKGVAS 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL K +I ++ P L AE+ L + D + Sbjct: 571 FRELPEAESLSAANKRIRNIL---RKSKEKIPPQVEPGLLQDPAEQALATQMYDLEREVS 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + Y L S+ ++ FFD+V+V V+D +R NRL+LL+ ++ + L V ++ Sbjct: 628 PLLERQDYQAALRALASLRGAVDRFFDEVMVMVEDPALRANRLALLERLQTLFLQVADIS 687 Query: 700 KI 701 ++ Sbjct: 688 RL 689 >gi|161729085|ref|NP_221197.2| glycyl-tRNA synthetase subunit beta [Rickettsia prowazekii str. Madrid E] Length = 664 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 234/693 (33%), Positives = 352/693 (50%), Gaps = 75/693 (10%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKI----E 68 IPA MQ A E I + EE I+ ++ + P R+ L+ + H P+ I E Sbjct: 13 IPAFMQKNAEEGYLKIFTKIF-EENEIFAKVQVFAGPRRITLH----ATHVPKVILPKEE 67 Query: 69 ERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTI 127 E GP + A + AI+GF ++ +S + + +Y ++K K R +++L I Sbjct: 68 EIKGPSIEAPEIAINGFCKA---HNVSKLDLSTKLRNNKLYYFFVKKTKERETKEILPKI 124 Query: 128 VPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGN 187 + AI K W KSM W WIRPL++ILCI E I+ L + N Sbjct: 125 IIDAINKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNN 174 Query: 188 ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 ITYGHR +++ ++Y L E V+L+ R I LA+A L + +D Sbjct: 175 ITYGHRLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDV 234 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 L+EE+ GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V Sbjct: 235 CLIEEVTGLSEFPIVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVI 294 Query: 308 NIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQ 367 N + + I+QGN +V++ARL DAL+F+K D++K L+ Sbjct: 295 NGRFVN-TELIIQGNEKVLSARLADALYFYKN--------------------DIAKTLES 333 Query: 368 RMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIV 427 R+ +L V+FH K+G+ E+V RI I + I D + A L K+DL +++V Sbjct: 334 RLDKLK--SVIFHTKLGSLKEKVDRI----TDICRYIAPDNIDLIMAAKLCKSDLVSDMV 387 Query: 428 REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLI 487 EFP+LQG +G YA + N AI +H KP+G +NVP+ ++ ++LADKLD+L+ Sbjct: 388 GEFPDLQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGNATL-LALADKLDSLV 446 Query: 488 NFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------------NL 534 + E P+GS DPYALRR LGIIRII+ENK++I I ++ Sbjct: 447 GLIIVGETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSV 506 Query: 535 ILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA 593 I FF +R K Y +D DI LI A+L + NL+ + L EF G++ L + Sbjct: 507 ISFFEERAKFYFKNDYDIT--LINAVL---DLNLVDTKFKLDTLKEFLVQDVGKQLLNAY 561 Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KR+ I+ N++I+ + + EK L+ VI I + +K Y + +L Sbjct: 562 KRVSNIMG-----NQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNL 616 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L S+ +PI FFD VLVN D ++ NRLSLLQ Sbjct: 617 LSSLLKPITSFFDNVLVNDSDPKIAQNRLSLLQ 649 >gi|157693025|ref|YP_001487487.1| glycyl-tRNA synthetase subunit beta [Bacillus pumilus SAFR-032] gi|157681783|gb|ABV62927.1| glycine--tRNA ligase beta subunit [Bacillus pumilus SAFR-032] Length = 681 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 219/719 (30%), Positives = 369/719 (51%), Gaps = 63/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR ++ + L + K + + ++++ + +P RL + + G++ Sbjct: 5 DVLLEIGLEEMPARFMSESTKQLGEKVKAWFKTQNISFEDVTLFNSPRRLAVLVTGVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + EE GP G KA +GF R G T D K+ KG Y+ V + Sbjct: 65 QEDIKEEAKGPAKKIAQDAEGNWTKAAEGFARGQGAST-DDLYFKE--IKGVDYVHVQKF 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + ++D+L + +A + +PK+MRW + +IRP+K I+C+ E+ Sbjct: 122 EEGKQVKDLLPALGEIATS-LSFPKNMRWGSKD-----LRYIRPIKWIVCLF-----GEE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ +D+ + G T GHRF I + S Y + L + V+ D + R+ AI + Sbjct: 171 IVPVDIAGVKSGRETRGHRFLGKAAI-IDSPASYEQTLRDQFVIADSDKRKQAITEQLNA 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LAS G + D +LLEE+ LVE+ V GSF++++L LPEE++ T+K +Q+ F + Sbjct: 230 LASEKGWVIPVDPELLEEVNNLVEYPTVLSGSFEEEFLALPEEVLVTTMKEHQRYFPVKN 289 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V N S+ + +GN +V+ ARL DA F+K D+ + Sbjct: 290 EQGELLPHFITVRNGN-SEALENVARGNEKVLRARLSDAAFFYKEDEKLV---------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALV 411 ++ + +LD VVFH K+GT G+++ R+ + ++A + AD V Sbjct: 339 ----------IEDNIKKLD--KVVFHEKLGTIGDKLKRVTNIATRLAAHVGADEETTERV 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +SK DL T++V EFPELQG +G++YA E+ +I EH PR + P+ Sbjct: 387 ARAASISKFDLVTQMVYEFPELQGIMGEKYAKALGEHEEVAKSINEHYMPRFAGDEAPST 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 I V++ADKLD++ +F++I+ P+GS+DPY LRR GI++I+L+ +I + + Sbjct: 447 LIGAIVAIADKLDSICSFFSIDVIPTGSQDPYGLRRQASGIVQILLDRHWNISFKELLAL 506 Query: 530 ------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + LI F RLK L IRHD+++A+L E+ +V L E S Sbjct: 507 AQVEEAHETALIEFLTHRLKYVLQAEHIRHDVVDAVLDVEDIEPYAVVKKAAVLEE---S 563 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 K E F +A+ + ++++I +K EI P+ E E++LY T ++E + Sbjct: 564 VKQESFKETAEALGRVISISKKGE---DAEIQPELFENEHEQKLYEAYQQVETAVKEHVA 620 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +Y + L ++ PI +FD +V+ DD +++ NRL+ + + +I N+ ++ Sbjct: 621 AGQYSAALEALDTLKTPIVHYFDHTMVHADDEKLKRNRLAQMVKLAKVIQSFANMNNLI 679 >gi|302391468|ref|YP_003827288.1| glycyl-tRNA synthetase beta chain [Acetohalobium arabaticum DSM 5501] gi|302203545|gb|ADL12223.1| glycyl-tRNA synthetase beta chain [Acetohalobium arabaticum DSM 5501] Length = 694 Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 222/728 (30%), Positives = 362/728 (49%), Gaps = 70/728 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 LLEI +EEIPA E L + L K+ + ++ Y TP RL L + +S Sbjct: 6 LLLEIGTEEIPAGFMEPTFEQLEELAAELFKQYRIETGSVATYGTPRRLTLVVNEVSSRQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +E GP G KA GF R GL T+ + +I+ D G+ AV + Sbjct: 66 DDLTKEVKGPAKNIAFDDEGNPTKAGSGFARGQGL-TVDELEIR-DTDNGEYLFAVQTEE 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E++L I+ I + + KSMRW+ ++RP+ IL + E + Sbjct: 124 GKPTEELLPEILTELIHDLDFAKSMRWADKD-----MQFVRPIHWILALYGDEP-----V 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +L++ +I T GHRF + I++ S Y L E V++D RR I++ L Sbjct: 174 ELEVADIESDTYTKGHRFLSTGQIEIDSAQDYFDRLNEEYVIVDQNKRREMIIDQITELG 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G E++ D+DLL+E+ LVE+ MGSFD+++L LP E++ +++ +Q+ F Sbjct: 234 KEAGGEVLIDEDLLKEVNYLVEYPTALMGSFDEEFLDLPREVLITSMREHQRYFPIEDDN 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V N + D + +GN +V+ ARL D + F++ DQ Sbjct: 294 GDLMARFITVRN-GSEDHIDIVREGNEKVLRARLADGMFFYEEDQKE------------- 339 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDR 413 DL +D+ + +V+F +GT E+V R+ L K A+ +D +V R Sbjct: 340 ---DLEDKVDE------LKNVIFQEDLGTIYEKVKRLVELSKVFAKKLDLSEKEVKDSKR 390 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A LSKADL TE+V EFP+L+G +G+EYA L EN + DAI EH PR + +P K Sbjct: 391 AAYLSKADLITEMVIEFPKLEGVMGREYAKLSGENKAVADAIFEHYLPRYATDVLPQTKT 450 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 VS+ADK+D ++ + + P+GS+DPYALRR GI++IIL++ + + L+ I++ Sbjct: 451 GQIVSIADKIDNIVGCFGVGLIPTGSQDPYALRRQAQGIVKIILDSDLKLNLAGLIDNVL 510 Query: 532 -----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ FF RL+ +R +R+D+ A+L + +L V Sbjct: 511 ELLVEAEKLKRSQGEVKTEVLDFFKQRLEHIFEERGVRYDVSNAVLATDITDLNDAVKRA 570 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + EF + K E L + R + ++ S +I+P E+E++LY Sbjct: 571 EAVMEFRNEEKFEDLLTAYNRAGNL------ADKATSEDINPDLFTDESEEKLYEAYQST 624 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++E + K Y D L ++ +P++ FF+ V+V DD +V++NRL+LL+ I Sbjct: 625 QAEVEELLVAKDYSSALDELATLQKPVDKFFNSVMVMADDEKVKNNRLALLKNTVQIFTK 684 Query: 695 VINVQKIV 702 + ++ +IV Sbjct: 685 IADLSEIV 692 >gi|210623879|ref|ZP_03294114.1| hypothetical protein CLOHIR_02065 [Clostridium hiranonis DSM 13275] gi|210153305|gb|EEA84311.1| hypothetical protein CLOHIR_02065 [Clostridium hiranonis DSM 13275] Length = 689 Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 230/725 (31%), Positives = 365/725 (50%), Gaps = 70/725 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L E+ EE+P+R + + +L E+ V ++N+ + TP RL + GL+ Sbjct: 5 LLFEVGVEEMPSRFVASTLKQIKESTEKMLNEKRVKFENIETFATPRRLTFIINGLAERQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL-AVLRK 115 + EE GP G K GF+RS GL D K+ K D YL A +R+ Sbjct: 65 EDLEEEVKGPSKKISLDADGNFTKPAQGFMRSKGLNP-EDIYFKEVGK--DEYLFATIRE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +VLK I+P+A++ V +PK+M W+ ++RP++ ++ +L +++ Sbjct: 122 NGAETAEVLKEILPLAVKSVVFPKAMHWAGKD-----IRFVRPIRWLVALL-----NDEV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +DL+ I N+T GHRF I V S++ Y L E V+LD R+ I+ A+++ Sbjct: 172 LPVDLEGIIASNVTKGHRFLGAKEIVVNSVEDYKAKLRENYVILDQAERKAMIVEQANKV 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++G +++ D DLL+E+ +VE+ F G FDK+YL LP+ ++ ++ +Q+ F Sbjct: 232 AESLGGKVIMDPDLLDEVTCIVEYPTAFYGEFDKEYLKLPKRVVITPMQDHQRYFPVEDA 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N S G + GN +V+ ARL DAL F++ D NL S KE Sbjct: 292 DGNLLPNFIAVRN-GDSFGIENVKAGNEKVLEARLADALFFYREDTKK--NLESYKE--- 345 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD--R 413 RL VVF K+GT ++ RI L IA + D R Sbjct: 346 ---------------RLKT--VVFQEKLGTIYDKSERITKLSAVIADSLGCADKKADIVR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL T +V EF ELQG +G EY+ L+ EN + AI EH P VP + Sbjct: 389 AAELCKADLVTNMVFEFDELQGYMGMEYSKLEGENPAVSQAIYEHYMPVSAGAEVPASLE 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 VS+ADKLD++ F+AI +P+GS+DP+ALRR LGI+ I++ENKI I + + E Sbjct: 449 GSVVSIADKLDSIAGFFAIGIQPTGSQDPFALRRQALGILNILMENKITIDIKEISEAAL 508 Query: 533 ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F +R+K D IR+D++EAIL + +++ + L Sbjct: 509 DNYTELEFNKEEVVGQMLDFCSERIKNLFKDMGIRYDVVEAILNADINDIADMHHRALEL 568 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA-EKRLYAVISDFGT 636 NE+ + + + L + R+ + E N + + LL+EA EK LY Sbjct: 569 NEWINKDELVEMLTAFNRVSTLAEKAEGVNVD-------EALLVEAPEKELYESFKSVKE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + +K Y + D ++ ++ FD V+V D VR+NRL++L+ I + +L + Sbjct: 622 EVKGHLANKDYGKALDSFATLKPAVDNMFDNVMVMDKDDNVRNNRLNMLKNISDTMLTIC 681 Query: 697 NVQKI 701 ++ KI Sbjct: 682 DLNKI 686 >gi|169632311|ref|YP_001706047.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii SDF] gi|238688157|sp|B0VQA1|SYGB_ACIBS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169151103|emb|CAO99765.1| glycyl-tRNA synthetase, beta chain [Acinetobacter baumannii] Length = 689 Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 212/719 (29%), Positives = 368/719 (51%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQVETVKGLNEAGLNFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGL--QTISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ + +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVEQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D ++ Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---QV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 IEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--TNMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQS 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRTLPEAAALAAANKRVANILAKEAASEGSV-VEAN---LVEDAEKALFAELQAVTPVVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 626 PLLTAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADV 684 >gi|293610784|ref|ZP_06693084.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827128|gb|EFF85493.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 689 Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 212/719 (29%), Positives = 364/719 (50%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLNFASIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K +L + ++I Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----KDDQI 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 VDATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLTALEKAYVVANFEKRQATIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQG 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVTFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ AEK L+A + ++ Sbjct: 570 FRTLPEAAALAAANKRVANILAKEATPEGSV-VEAN---LVEAAEKALFAELQAVTPVVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADV 684 >gi|78484700|ref|YP_390625.1| glycyl-tRNA synthetase, beta subunit [Thiomicrospira crunogena XCL-2] gi|78362986|gb|ABB40951.1| glycyl-tRNA synthetase, beta subunit [Thiomicrospira crunogena XCL-2] Length = 690 Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 216/722 (29%), Positives = 353/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + K + + L + + Y Y +P RL + + L Sbjct: 7 EFLVEIGTEELPPKALKKLSNAFMDGIKAGLDDAELNYGETAVYASPRRLAVRIDALQTK 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K ER GP G KA+ GF R G +I+ + KG + L + Sbjct: 67 QADKTVERKGPAKKAAFDAEGQPTKALQGFARGCGADVADLSEIETE--KGIWMVYYLEQ 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L ++L IV ++ K+P PK MRW S ++RP+ L +L +++ Sbjct: 125 KGQLTAELLPAIVNQSLAKLPIPKRMRWGA-----SDVEFVRPVHWALMLL-----DDQV 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 + + N T+GHRFHAP I++ Y+ L E+ V D E R+ I Sbjct: 175 VPATILGHQTSNKTHGHRFHAPQAIEICKPSEYVSVLKEQGYVQADFEERKARIREQVEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A + G D DLL+E+ L EW +G FD+ +L +P E + +K +QK F Sbjct: 235 VAQSAGGVADIDDDLLDEVTALNEWPTAVVGDFDESFLSVPSEALISAMKGHQKYFHILD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI +SNI++S+ ++ GN RV+ RL DA FW Sbjct: 295 KAGQLMAKFITISNIESSNP-ESVKNGNERVIRPRLSDAKFFW----------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 N D +PLD + RL VVF K+GT ++V R+ L KI + + D +++RA Sbjct: 337 ---NQDRKQPLDDFLPRLKT--VVFQQKLGTLYDKVERLETLVVKIGRPLGEDAQVLERA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL TE+V EFP+LQG +G+ YA QNE++ DAI+ +PR + +P + +S Sbjct: 392 ARLSKCDLMTEMVGEFPDLQGVMGRYYAQAQNEDVKVADAIDGQYQPRFAGDQLPDSVVS 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------- 525 +++ADKLDT+ + I + P+G KDP+ALRR+ LG++RI++E ++D+ L Sbjct: 452 QALAIADKLDTITGIYGIGQVPTGDKDPFALRRSALGLVRILIEKELDLDLQLMIRFSLD 511 Query: 526 --SQFIEDQNLILFFHD----RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 S+ + L++ +D RLK Y + + + EA+ + L I+ + + Sbjct: 512 LHSEIDTSEALVMEIYDFIISRLKAYYAGKGVSAEQFEAVRVCAPSHPLDFAKRIEAVCQ 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL +K + + E+ ++E+ L+ + + Sbjct: 572 FSEMDEAESLSAANKRIANIL---KKVDATLPEEVESSLFEEDSERDLFDALDALRETVS 628 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y LL +I +P++ FFD V+V DD V+ NRL+LL I + V ++ Sbjct: 629 NKIAERDYAGAMQLLATIRQPVDAFFDNVMVMADDEAVKLNRLALLNQIYQLFRQVADIS 688 Query: 700 KI 701 ++ Sbjct: 689 RL 690 >gi|325123646|gb|ADY83169.1| glycyl-tRNA synthetase, beta chain [Acinetobacter calcoaceticus PHEA-2] Length = 689 Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 213/719 (29%), Positives = 365/719 (50%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLNFVSIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K +L + ++I Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----KDDQI 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ GN+TYGHRFHAP + + + Y+ LE+A V+ D E R+ I +L Sbjct: 173 VDATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLTALEKAYVVADFEKRQATIKQQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSPITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQG 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRTLTEAAALAAANKRVANILAKEAAPEGSV-VEAN---LVEDAEKALFAELQAVTPVVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDVDLKANRLRLLAQLRNLFTAVADV 684 >gi|260549881|ref|ZP_05824097.1| glycyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260407131|gb|EEX00608.1| glycyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 689 Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 208/717 (29%), Positives = 360/717 (50%), Gaps = 62/717 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLNFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V A GK KA++GF+R G+ + YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITADQLSTFHAGKVEKVCYLKDVKG-- 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR + + + ++RP+K +L + ++I+D Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----KDDQIVD 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLEALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 NIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEAAPEGSV-VEAN---LVEDAEKALFAELQALTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDSVMVMADDADLKANRLRLLAQLRNLFTAVADV 684 >gi|117924741|ref|YP_865358.1| glycine--tRNA ligase [Magnetococcus sp. MC-1] gi|254781855|sp|A0L7K9|SYGB_MAGSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|117608497|gb|ABK43952.1| glycyl-tRNA synthetase beta chain [Magnetococcus sp. MC-1] Length = 700 Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 224/737 (30%), Positives = 358/737 (48%), Gaps = 76/737 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F+ EI +EEIPARM A + + L+E G+ + + TP RL + + GL Sbjct: 1 MAEFMWEIGTEEIPARMLPGAITAMGELTRTALQEAGLGFAQVESQGTPRRLLVVVHGLH 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EER GP + A KA GF R G+ D + + KG L Sbjct: 61 DKQADVQEERRGPALQAAFDSDGNPTKAAQGFARGCGVDV--DQLSRVETPKGTYLSYTL 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + +VL I+ + +PWPK+MRWS S ++RP++S+ +L + Sbjct: 119 KQAGKGASEVLPGIMQQVFKALPWPKTMRWSDGES-----RFVRPVQSVTALLNGQQ--- 170 Query: 174 KIIDLDLKEIPCGNITY-----GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + ++L E N+ Y GHRF + VQ Y + + + V+L E R I Sbjct: 171 --VAVELAE----NVRYTDAVSGHRFMGKGAVVVQDYASYQQAMADGKVMLKSEDRMATI 224 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A++VG + D+ L+ E L EW +G FD++YL +P E++ +++ +QK Sbjct: 225 RAGVLAQAASVGGVVASDEGLVAENASLTEWPVALLGRFDERYLEIPPEVLTTSMRYHQK 284 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L F++++N++ D +V+G RV+ ARLEDA FW D+ Sbjct: 285 YFPVLDAQGGLKPHFVVIANMETEDQ-TVLVRGYQRVLKARLEDAAFFWAEDR------- 336 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA-QLIDAD 407 K L P D+ VV+ AK+G+ ++ R+ L IA ++ Sbjct: 337 -------KIRLTDRLP--------DLQAVVWQAKLGSLFQKSQRMAHLASAIAARVAPQQ 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEY---AVLQNENISCCDAIEEHLKPRGP 464 AL ++A + SK DL T +V EFPELQG +G Y Q+E ++ AI EH P G Sbjct: 382 AALAEKAGLYSKCDLVTGMVGEFPELQGIMGGYYLPRERAQDEVVAL--AIREHYMPAGA 439 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-ENKIDI 523 + +P + VSLADKLDTL+ + + P+G+KDP+ LRRA LG+IR++L E + + Sbjct: 440 GDALPQSLCGRIVSLADKLDTLVGCFGMGITPTGTKDPFGLRRAALGVIRLLLQEQGLRL 499 Query: 524 PLSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 PL Q E+ Q ++ FF+ RL+ +L + +DLI+A+ D Sbjct: 500 PLRQLCEEAYRQYGEIGLEMGEAQTVQGVLAFFYGRLQAHLKAEGVDYDLIDAVQGLNLD 559 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 +L V +K L F A E + + KR+ IL+ E +++L + L AE+ Sbjct: 560 DLWDAVSRVKALVAFKQDAAYEALVAANKRMANILSKVEDSALDLTLGVDEAVLKASAEQ 619 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L A ++ ++ + RY + L ++ I+ FFD+V+V +D VR NRL LL Sbjct: 620 GLAAAVAAVEDRVKTHSSNGRYAEALGELAALRGVIDTFFDEVMVMDEDDAVRHNRLRLL 679 Query: 686 QYIKNIILIVINVQKIV 702 + + V +V +V Sbjct: 680 ATVLGLFRQVADVSCLV 696 >gi|239948186|ref|ZP_04699939.1| glycyl-tRNA synthetase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239922462|gb|EER22486.1| glycyl-tRNA synthetase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 664 Score = 313 bits (801), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 233/689 (33%), Positives = 353/689 (51%), Gaps = 67/689 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + EE I+ ++ + P R+ L+ L + K E G Sbjct: 13 IPALMQKNAEEGYLNIFTKIF-EENEIFAKVQVFAGPRRIMLHATHLPKVTLSKELEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 72 PSTEAPEAAINGFCKA---HNVSKLELSTKLINNQLYYFFVKKTEEREIKEILPEIIIEA 128 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E ++ L + NITYG Sbjct: 129 INKYSWAKSMFWGNYK-----IKWIRPLRNILCIFDGE-----VLPLQFGHLTANNITYG 178 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR ++V + Y L E V+L+ R I + LA++ L + ED L+E Sbjct: 179 HRLTDNKKLEVTDFEDYRNKLLENHVILERTKREEVIKSGLLELANSHNLNIKEDNRLIE 238 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E+ GL E+ V +G +K+L LP+E++ +++T QK F + G A F+ VSN + Sbjct: 239 EVAGLSEFPVVLLGKIPQKFLELPKEVLISSMRTXQKYFCLFDKTGNFAPYFLFVSNGRF 298 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 ++ +++GN +V++ARL DAL+F+K+ D++K L+ R+ + Sbjct: 299 ANTD-LVIKGNEKVLSARLSDALYFYKQ--------------------DIAKTLESRLGK 337 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L+ V FHA++G E+V RI + K IA + D+ V + L K+DL +E+VREFP Sbjct: 338 LEA--VTFHAELGKLREKVERITKICKHIAP-NNKDLITVAK---LCKSDLVSEMVREFP 391 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 ELQG +G YA + N AI++H KPRG +NVP+ ++ KLD+L+ Sbjct: 392 ELQGIMGYYYAKHEGLNEEVATAIKDHYKPRGLNDNVPSRNAALLALAD-KLDSLVGLMI 450 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------EDQN---LILFF 538 E P+GS DPYALRR LGIIRIILENK+++ L+ I D+N +I FF Sbjct: 451 AGEAPTGSGDPYALRRQALGIIRIILENKLELHLNSLINFSINLYKDSSDKNKDLIISFF 510 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R+K Y +D DI LI A+L + NL+ + L EF G + L + +R Sbjct: 511 EERVKFYFKNDYDIA--LINAVL---DLNLVDTKFKLDALKEFLIEDAGRQLLNAYRRAS 565 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ ++I + + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 566 NII-----DGQKIIGLVDASLFITQPEKELFEVIQKISPQIIDSIADKDYKRALNLLSSL 620 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 PI FFD VLVN D ++ NRLSLLQ Sbjct: 621 LTPITSFFDNVLVNDSDSKIAQNRLSLLQ 649 >gi|261856636|ref|YP_003263919.1| glycyl-tRNA synthetase subunit beta [Halothiobacillus neapolitanus c2] gi|261837105|gb|ACX96872.1| glycyl-tRNA synthetase, beta subunit [Halothiobacillus neapolitanus c2] Length = 692 Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 219/725 (30%), Positives = 355/725 (48%), Gaps = 66/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + + + L+ L+ L+E G+ + + Y P RL + ++ ++ Sbjct: 6 DFLFELGTEELPPKALLRLSNALTEELLTALREAGLAFGTHQSYAAPRRLAVLIREVAAS 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +PE+ ER GP + G +A++GF RS G+ + +I+ D KG + + Sbjct: 66 TPEQAVERKGPALASAFDAEGKPSRALEGFARSCGVTVDALEKIETD--KGTWLVHRHTQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +++ + A+ K+P PK MRW + +IRP+ + + + Sbjct: 124 PGKTAAEIIPVAIARALDKLPTPKRMRWGSHE-----VEFIRPVHWAVAL-----HGNTV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ID ++ + G T+GHRFH P I ++S Y LE+ VL D RR+ I Sbjct: 174 IDTEILGVKAGKETFGHRFHHPAAITIESPASYADVLEKKGFVLADFAARRSKIQAQIEA 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A +G D DLL+E+ LVEW G F++ +L +P E + T++ NQK F Sbjct: 234 IARDLGGTARVDDDLLDEVTALVEWPVAVAGKFEESFLQVPHEALISTMQGNQKYFPLVD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL--PNLSSLKE 352 + L FI ++NI S AA+ +GN RV+ R DAL FW D+ + +L SLK Sbjct: 294 VQNRLLPWFITIANID-SKNPAAVREGNERVIRPRFSDALFFWNEDRKHTLESHLESLK- 351 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 V+F ++G+ ++ R+ L + IA I DVA Sbjct: 352 -----------------------TVIFQQRMGSLFDKTIRVERLAEFIAAQIGGDVAQTR 388 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L K DL + +V EFPELQG +G+ A E + A +++ PR +++P + Sbjct: 389 RAARLCKCDLQSHMVGEFPELQGIMGRYLAANDGEPAAVAQAQDDYYLPRRAGDSLPGDA 448 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 +S V+LAD+LDTL+ +AI + P+G+KDP+ALRRA LG++RII+E ++D+ L +E Sbjct: 449 VSQAVALADRLDTLMGIFAIGQAPTGAKDPFALRRAALGVLRIIVEQRLDLDLKSLLEQA 508 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q + F +R Y DR IR D+ A+ + L + Sbjct: 509 AKGLVSVIPEAPGHVQAVFEFITERQYRYSLDRAIRADVFAAVAAVGTTHPLDFEQRMVA 568 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 +NEF + + E KRI IL +K+ + + I L AEK L+ ++ Sbjct: 569 VNEFLNLPESEPLTAGNKRIQNIL---KKQEQPVDGLIQADLLQESAEKALFEAVTKMTP 625 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 I + + Y L + PI+ FFD+V+V DD +R NRL+LLQ + L + Sbjct: 626 RITAATAARAYTDALTELAQLRAPIDRFFDEVMVMADDAAIRHNRLALLQQTGALFLSIA 685 Query: 697 NVQKI 701 ++ ++ Sbjct: 686 DLAQL 690 >gi|308174314|ref|YP_003921019.1| glycyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens DSM 7] gi|307607178|emb|CBI43549.1| glycyl-tRNA synthetase (beta subunit) [Bacillus amyloliquefaciens DSM 7] Length = 679 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 224/719 (31%), Positives = 360/719 (50%), Gaps = 65/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR H + L L G L E+ + + ++ + TP RL +Y+K ++ Sbjct: 5 DLLLEIGLEEMPARFLHDSMVQLGEKLTGWLAEKNIAHGEVKLFNTPRRLAVYIKDVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF + G + D IK V++ + Sbjct: 65 QADIQEEAKGPAKKIALDADGNWTKAAIGFSKGQG-AGVDDLYIKDVNGTEYVFVQKFQA 123 Query: 116 PKRLIEDVLKTIVPVA---IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + KT++P I + +PK+MRW T +IRP+K I +L +D Sbjct: 124 GQET-----KTLLPQLENLITGMHFPKNMRWGTQD-----LRYIRPIKWI-AVLFGKD-- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I ++ + G T GHRF + + + Y L+E V+ DP+ R+ I + Sbjct: 171 --VIPFEITNVGTGRNTQGHRFLGEE-VSIDAPSSYEELLKEQHVIADPKVRKQMIQSQL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ + D+DLL E+ LVE+ GSF+ ++L LPEE++ T+K +Q+ F Sbjct: 228 DALAADKKWNIPIDEDLLNEVNQLVEYPTALYGSFESEFLSLPEEVLVTTMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 288 KDENGNLLPHFITVRNGN-SHAIENVARGNEKVLRARLSDAAFFYKEDQ----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 K N+D + + +L+ ++VFH ++G+ G++V R + K+A + AD Sbjct: 336 ---KLNIDAN------VKKLE--NIVFHEELGSLGDKVRRAAAIAGKLAVRLKADEQTQK 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR +VP Sbjct: 385 LVKRAAEISKFDLVTHMIYEFPELQGVMGEKYARMLGEDEAVAAAVNEHYMPRAAGGDVP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V+LADKLDT+ +F++I+ P+GS+DPY LRR GI+ I+++ I + + Sbjct: 445 STFTGAVVALADKLDTIASFFSIDVIPTGSQDPYGLRRQASGIVSILIDRNWGISFKELL 504 Query: 530 -----EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 E +N +L FF RLK L+ DIRHD+IEA+L + V + L + + Sbjct: 505 SLTETEKENELLDFFTQRLKYVLNAEDIRHDVIEAVLDSTDLEPYAAVHKARVLEKHLGT 564 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 F +A+ + ++++I +K S +I P E EK+L+ + ES Sbjct: 565 P---GFKETAEALGRVISISKKGE---SRDIKPDLFENEQEKKLFDAYQKTKDSVAESFA 618 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y Q L + EPIE +F+ +VN D+ ++ NRL+ + + ++I N+ ++ Sbjct: 619 SKNYEQALTALSGLKEPIEDYFNHTMVNADNEALKTNRLAQMTALADVIKSFANMNHLI 677 >gi|291612940|ref|YP_003523097.1| glycyl-tRNA synthetase, subunit beta [Sideroxydans lithotrophicus ES-1] gi|291583052|gb|ADE10710.1| glycyl-tRNA synthetase, beta subunit [Sideroxydans lithotrophicus ES-1] Length = 716 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 228/737 (30%), Positives = 374/737 (50%), Gaps = 92/737 (12%) Query: 20 KAAEDLSII----LIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 KA E LS + LKE+ ++ +N Y TP RL + + + P+++ ER GP Sbjct: 17 KALEKLSTTFANEVFASLKEQALLNENSVCTPYATPRRLAMSITEVEQQQPDRVIERKGP 76 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 V AG KA++GF+RS + T+ Q + K + ++A + + + +++ L Sbjct: 77 AVAAGLDAEGKPTKALEGFMRSANV-TLGQLQ-RVGEGKAEYFVARIEQKGKSLDEHLPE 134 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +V A++K+P PK MRW ++RP+ L IL + +I+ ++ + G Sbjct: 135 MVTQALKKLPVPKLMRWGDFEH-----QFVRPVHG-LTILHGK----RIVPAEVLGLSSG 184 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASA-----VG 240 N+T GHRF + + ++ D Y L + V+ RR +I+ LA VG Sbjct: 185 NVTSGHRFLSSERVTIEHADDYEATLARDGRVVASFTQRRESIVARLDDLAEQNKAIWVG 244 Query: 241 ---------LELVEDK-----DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 L + D+ +LL+E+ GLVEW +V++G F+ ++L +P+E + LT++ N Sbjct: 245 HANFDLEKLLSMSNDERGVLSNLLDEVTGLVEWPEVYVGQFEAEFLDVPQECLILTMQQN 304 Query: 287 QKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 QK F + G L N F++VSN+Q SD I++GN RVV RL DA F Sbjct: 305 QKYFPLLDASSGKLLNKFLIVSNMQVSDP-HHIIEGNQRVVRPRLADARFF--------- 354 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 FN D + L+ R+ +L +VV+H K+G+Q +RV RI L IA+L++ Sbjct: 355 -----------FNQDRKQKLESRVEKLG--NVVYHNKLGSQLQRVERITTLAGTIARLLE 401 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 AD A + A L KADL T++V EFPELQG IG+ YA E++ +AIE H PR Sbjct: 402 ADKAQAELAARLCKADLLTDMVGEFPELQGIIGRYYAFHDGEDLEVANAIEAHYHPRFAG 461 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI---- 521 +++P ++ +V+LADKL+T++ + I + P+G KDP+ LRR LGI+RI++E + Sbjct: 462 DSIPMGAVACSVALADKLETVVGIYGIGQVPTGDKDPFGLRRQALGILRILIETPLDLPL 521 Query: 522 ---------DIPLSQFIED--QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + P ++ F DRL+ YL DR IEA+L N L + Sbjct: 522 PALLKATADNFPAGMLSATVAADVEGFMMDRLRGYLRDRSFDVSHIEAVLAVLNGRLHEV 581 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-----PQYLLLEAEK 625 + ++ + F + + + KR+ I+ K + E+ ++ + + EAE+ Sbjct: 582 LPRLQGVRAFAAMTVAKDLAAANKRVQNIM---RKNHEELGAAMANAVFDAKLMTDEAER 638 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+ ++D Q Y Q L ++ I+ FFDQV+V DD+++R NR LL Sbjct: 639 NLHQAMTDIAPFAQGYFSRGEYGQNLKTLVTLKPFIDDFFDQVMVMADDQKLRINRALLL 698 Query: 686 QYIKNIILIVINVQKIV 702 + + N++ V ++ K+ Sbjct: 699 RQLANLMNQVADISKLA 715 >gi|134300311|ref|YP_001113807.1| glycine--tRNA ligase [Desulfotomaculum reducens MI-1] gi|238685553|sp|A4J7C9|SYGB_DESRM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|134053011|gb|ABO50982.1| glycyl-tRNA synthetase beta chain [Desulfotomaculum reducens MI-1] Length = 695 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 219/733 (29%), Positives = 359/733 (48%), Gaps = 78/733 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ EE+PAR A L + L+E + Y +++ Y TP RL LY+K L+ + Sbjct: 4 DFLLEVGIEEMPARFLGPALTQLKEQTVKTLQELRIEYADIQTYGTPRRLVLYIKDLAEN 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +E GP G KAI GF RS G+ ++ D ++ + +Y A+ R+ Sbjct: 64 QAALEKEVKGPAKKAAFDAAGNPTKAILGFTRSQGV-SMEDLVVRSIGQVEYLY-ALKRE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R VL I P I + +PK MRW + RP++ +L + E + Sbjct: 122 EGRPTAQVLAEICPGLIAGLHFPKPMRWGELE-----LRFARPIRWLLALF-----GEAV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +L + TYGHRF + + + + + Y + A VL+DP R+ I L Sbjct: 172 VPFELANLQSNRFTYGHRFLSTGDLSIANPEDYFTKIRGAYVLIDPAERKELIWQQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+A G + +D+DLL+EI ++EW G+FD+ YL LP ++ ++ +Q+ F + Sbjct: 232 ATAEGGVVEKDEDLLDEITNILEWPTALCGTFDEDYLKLPGAVLVTPMREHQRYFPVVSN 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQ----GNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L N FI V N G A ++ GN +V+ ARL DA F Sbjct: 292 EGKLLNKFIAVRN-----GTRAYIEIVTAGNEKVLRARLADAAFF--------------- 331 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 F DL +PL ++ L VVF +G+ ++V RI + +A+ + A+ Sbjct: 332 -----FEEDLKQPLASKVNGLQ--KVVFLEGLGSIADKVDRIGAMADHLAETLGANEEQR 384 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R +L+KADL T +V EFPELQG++G+EYA+ E +AI EH PR + + Sbjct: 385 ENIQRGALLAKADLITNMVYEFPELQGEMGREYALRNGEAPEVAEAIFEHYLPRFAGDLL 444 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P +S+ADK+D+++ +AI +P+GS+DPYALRR LGI +++E I + L + Sbjct: 445 PETLAGSVLSVADKMDSIVGCFAIGIQPTGSQDPYALRRQALGICHMLIEGNIHLSLREL 504 Query: 529 I--------------EDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + +D N ++ FF RLK L+DR + +D ++A+L D++ Sbjct: 505 VQWAYQGYHEGVELKQDLNQVITEIEEFFKQRLKGILNDRGLSYDTVDAVLTAGFDDIAD 564 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +VD L F + + R + + ++ +L AE+ LY Sbjct: 565 VVDRGMALAAFRELPAFAALMTAFNRANNL------AKHATTTQVQEVHLEHSAEQELYG 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +++ ++ ++ K Y + +I P++ FF+ V+V V+D V+ NRL+LL+ + Sbjct: 619 LLTKLEGEVRPLLEQKNYALALQKIATIQSPLDTFFESVMVMVEDEAVKTNRLALLKKLV 678 Query: 690 NIILIVINVQKIV 702 + + V + KIV Sbjct: 679 GLSMNVADFSKIV 691 >gi|238685535|sp|A3M9C2|SYGB_ACIBT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|193078508|gb|ABO13516.2| glycyl-tRNA synthetase beta chain [Acinetobacter baumannii ATCC 17978] Length = 689 Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 212/719 (29%), Positives = 366/719 (50%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D ++ Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---QV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 IEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDS-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQG 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRTLPEAAALAAANKRVANILAKEAAPEGSV-IEAN---LVEDAEKALFAELQAVTPVVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADV 684 >gi|50086259|ref|YP_047769.1| glycyl-tRNA synthetase subunit beta [Acinetobacter sp. ADP1] gi|81827366|sp|Q6F7L8|SYGB_ACIAD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|49532235|emb|CAG69947.1| glycyl-tRNA synthetase, beta chain [Acinetobacter sp. ADP1] Length = 689 Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 213/719 (29%), Positives = 370/719 (51%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLAFASIEAYAAPRRLALKIVDVDGAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITADQVSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D +I Sbjct: 125 --QTLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---QI 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 IEATIQDHQAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F++++L +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRANFEERFLAVPQEALITTMQDNQKYFCLINS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSPITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQG 509 Query: 531 --------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 D+ L + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTLADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRALPEAAALAAANKRVANILAKEAAPEGSV-VEAN---LVEDAEKALFAELQAVTPAVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++++ +V +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRHLFTVVADV 684 >gi|239503276|ref|ZP_04662586.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB900] Length = 689 Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 212/719 (29%), Positives = 367/719 (51%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLNFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGL--QTISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ + +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVEQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D ++ Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---QV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 IEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQG 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRTLPEAAALAAANKRVANILAKEAAPEGSV-IEAN---LVEDAEKALFAELQAVTPVVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADV 684 >gi|254976024|ref|ZP_05272496.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-66c26] gi|255093412|ref|ZP_05322890.1| glycyl-tRNA synthetase beta chain [Clostridium difficile CIP 107932] gi|255315157|ref|ZP_05356740.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-76w55] gi|255517826|ref|ZP_05385502.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-97b34] gi|255650942|ref|ZP_05397844.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-37x79] gi|260684012|ref|YP_003215297.1| glycyl-tRNA synthetase subunit beta [Clostridium difficile CD196] gi|260687672|ref|YP_003218806.1| glycyl-tRNA synthetase subunit beta [Clostridium difficile R20291] gi|306520822|ref|ZP_07407169.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-32g58] gi|260210175|emb|CBA64364.1| glycyl-tRNA synthetase beta chain [Clostridium difficile CD196] gi|260213689|emb|CBE05557.1| glycyl-tRNA synthetase beta chain [Clostridium difficile R20291] Length = 688 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 235/737 (31%), Positives = 375/737 (50%), Gaps = 86/737 (11%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVY 109 S + EE GP A K A+D GF++S GL SD K+ K+ ++ Sbjct: 61 SDRQSDLEEEIKGP---AKKIAVDAENNLTKPALGFIKSKGLSE-SDIYFKQVGKEEYIF 116 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 117 -ATIKQDGKETSEVLKDILPETIKSVVFPKAMRWGGKN-----LKFARPIRWIVALL--- 167 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 168 --NDKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIR 225 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ Sbjct: 226 KQCIEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRY 285 Query: 290 FVTRTREGVLANCFILVSNIQAS--DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F +EG L FI V N + D A GN +V+ ARL DAL F++ D NL Sbjct: 286 FPV-LKEGKLLPNFIAVRNGDSYRIDNVKA---GNEKVLEARLADALFFYREDTKR--NL 339 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 S E + VVF K+GT ++ R+ L A ++D+ Sbjct: 340 ESYIEK--------------------LKTVVFQVKLGTIYDKTLRLEKLS---ADILDS- 375 Query: 408 VALVD------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + LVD RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH P Sbjct: 376 LGLVDEKADTIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLP 435 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ Sbjct: 436 RFAGDILPKTNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKV 495 Query: 522 DIPLSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + + IE + ++ FF++R+K D IR+D+++A+L + + Sbjct: 496 AVDIKVLIEHALDNYSELDFNKEEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDIN 555 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 ++ + LN + + + L + R+ + E S +I L +AE Sbjct: 556 DVSDMHMRALELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEI 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 RLY + E + K+Y D S+ ++ FD V+V +D +++NRL+LL Sbjct: 610 RLYNEFKQVKVKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALL 669 Query: 686 QYIKNIILIVINVQKIV 702 + + + +L + ++ KIV Sbjct: 670 KQVYDTMLEICDLSKIV 686 >gi|85711017|ref|ZP_01042078.1| glycyl-tRNA synthetase beta subunit [Idiomarina baltica OS145] gi|85695421|gb|EAQ33358.1| glycyl-tRNA synthetase beta subunit [Idiomarina baltica OS145] Length = 688 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 226/724 (31%), Positives = 362/724 (50%), Gaps = 74/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLS-IILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + + +E I GL K E + + ++ TP RL + + L Sbjct: 6 LLVELGTEELPPKALKQLSESFKHGIEEGLNKAE-LAFGEIKALATPRRLAVLVNSLEGQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G++ +++ D KG L Sbjct: 65 QQDKVVEKRGPSVDVAFDEAGQPTKAAQGWARSNGIEVSEAERLETD--KGAWLLHKAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + VL IV A++K+P PK MRW + + +IRP+ ++ + +++ Sbjct: 123 KGESLAQVLPGIVEDALKKLPIPKPMRWGDSDA-----QFIRPVHTLTLLF-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ L I G HRFHAP +Q D Y L + V+ D R I + L Sbjct: 173 INASLLGIKSGRHINAHRFHAPDGFDIQHADDYEAQLYKHHVIADQAKRMELIRTSINDL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS +G + D+DL+EE+ LVEW SFD+++L +P+E + +T+K +Q+ F + Sbjct: 233 ASQLGGTVETDEDLVEEVSALVEWPVALSASFDEQFLTVPKEALIVTMKDDQRYFPVQDD 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI ++NI + D I++GN RVV RL DA F++ D+ LSS Sbjct: 293 KGELKPVFIFITNIDSKDP-KQIIKGNERVVRPRLADAQFFFESDKK--VTLSS------ 343 Query: 356 KFNLDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 RLD L V+F ++GT ++ RI L +IA ++AD A Sbjct: 344 ---------------RLDKLGTVLFQKQLGTMKDKSERISRLSARIAGSLNADEQHARLA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L K DL T++V EFPE QG +G+ YA+ + DAIE+H PR +N+PT+ +S Sbjct: 389 GELCKTDLVTDMVSEFPETQGVMGRHYALNDGLDAEVADAIEQHYWPRFAGDNLPTSDVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADKLD+L+ + I + P G +DP+ALRRA LG+IRII+E+ +++ L + I+ Sbjct: 449 RSVALADKLDSLVGIFGIGQTPKGDRDPFALRRAALGLIRIIVESNLNLDLYELIDAAIG 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPENDNLLTIVDLI 574 +N+ F R + + ++ I D+I+A+L RP + NL I Sbjct: 509 EFGDRLSNNDVRENVFNFIIGRFRPWYQEQGISVDVIQAVLARAPSRPADFNL-----RI 563 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 ++ F E + KR+ IL+ K +++ +I L+ EK L A IS+ Sbjct: 564 HAVDAFKQHDAAESLSAANKRVGNILS---KSEGDLTGKIDHTLLVAAEEKTLAAQISET 620 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + Y + S+ PI+ FF+ V+VN +D VR NRL+LL ++ + L Sbjct: 621 EKSAEPEIAAGNYEGALTRMASLKSPIDDFFENVMVNDEDPAVRQNRLNLLYQLRGMFLR 680 Query: 695 VINV 698 V ++ Sbjct: 681 VADI 684 >gi|257453498|ref|ZP_05618788.1| glycyl-tRNA synthetase, beta subunit [Enhydrobacter aerosaccus SK60] gi|257448956|gb|EEV23909.1| glycyl-tRNA synthetase, beta subunit [Enhydrobacter aerosaccus SK60] Length = 725 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 222/734 (30%), Positives = 365/734 (49%), Gaps = 69/734 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L+ + LK+ + + ++ + P RL L ++G+S Sbjct: 26 MSTILFELGTEELPPKNLKTLRDALNNHVTQSLKDANIRFDTIKSFAAPRRLALQIQGIS 85 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVY---L 110 P+KIE++ GP V A KA GF + G+ IK D KGD + Sbjct: 86 EKQPDKIEQKRGPAVKAAYDKDGNPTKAAQGFAQGLGIDVKDLITIKGD--KGDYIGYEM 143 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC-----I 165 V+ +P + ++L +I A+ ++P K MR S ++RP+K ++ + Sbjct: 144 NVIGQP---VAELLPSIFQKALDELPIAKRMRSGAERS-----EFVRPVKWLVLLKDDQV 195 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRR 225 L A + L+ G + GHRFH P +K+ + D Y ++L EA V+ D + R+ Sbjct: 196 LPATIQGLTSGEAGLQGFEKGRFSLGHRFHHPDMVKIDTADSYEQNLAEAHVIADFDKRQ 255 Query: 226 NAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 I +LA VG + +DLL+E+ LV++ SF+ ++L +P+E + T++ Sbjct: 256 QQIKAQVQQLADEVGATAIVPQDLLDEVTALVDYPVALRASFEPRFLQVPQEALISTMQA 315 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 +QK F +G L FI +SNI + D A ++ GN +VV RL DA F+ +DQ Sbjct: 316 DQKYFCLTDSQGKLQPYFIFISNIDSKDK-AQVIAGNEKVVRPRLADAEFFFLQDQKQ-- 372 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 L +L E+ L R VF K+GT E+ RI L IA I Sbjct: 373 PLFALTEN-----------LKTR---------VFQDKLGTIWEKSERIAKLAAFIATQIG 412 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 DV RA +LSKADL + +V EFPELQG G YA L E + AIEE P+ Sbjct: 413 EDVEQTARAGLLSKADLASTLVGEFPELQGVAGTYYARLNQEPEAVAAAIEEQYLPKFSG 472 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P I ++LAD+LDTL+ + I++ P+GSKDP++LRRA +G++RI++E K+ + L Sbjct: 473 DKLPATNIGTALALADRLDTLVGIFGIDQAPTGSKDPFSLRRAAIGVLRILIEKKLPLNL 532 Query: 526 SQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 +E + ++ F + R + ++ + D I A+ + + Sbjct: 533 VVLLEQALLGYVGKIDDLPKTFKQVMAFINSRYRAMYEEQGVSVDTIMAVQALQPQVPMD 592 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 IK + F ++ + KR+ ILA K EI+ ++ YL AEK LY Sbjct: 593 FDHRIKAVQAFRDLPPAKQLAEANKRVANILA---KAEGEIATQVQTAYLQEPAEKALYQ 649 Query: 630 VISDFGTHIQ--ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + I+ + D+ Y QI L ++ +P++ FF+QV+VN +D ++ NRL+LL+ Sbjct: 650 AVQTAAQSIEPHQHTDNANYTQILQSLATLQQPLDDFFEQVMVNSEDANLKANRLALLKK 709 Query: 688 IKNIILIVINVQKI 701 ++ + L V ++ ++ Sbjct: 710 VRGLFLTVADISEL 723 >gi|328554260|gb|AEB24752.1| glycyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens TA208] gi|328912657|gb|AEB64253.1| glycyl-tRNA synthetase (beta subunit) [Bacillus amyloliquefaciens LL3] Length = 679 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 222/719 (30%), Positives = 358/719 (49%), Gaps = 65/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR H + L L G L E+ + + ++ + TP RL +Y+K ++ Sbjct: 5 DLLLEIGLEEMPARFLHDSMVQLGEKLTGWLAEKNIAHGEVKLFNTPRRLAVYIKDVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF + G + D IK V++ + Sbjct: 65 QADIQEEAKGPAKKIALDADGNWTKAAIGFSKGQG-AGVDDLYIKDVNGTEYVFVQKFQA 123 Query: 116 PKRLIEDVLKTIVPVA---IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + KT++P I + +PK+MRW T +IRP+K I + Sbjct: 124 GQET-----KTLLPQLENLITGMHFPKNMRWGTQD-----LRYIRPIKWIAALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + +I ++ + G T GHRF + + + Y L+E V+ DP+ R+ I + Sbjct: 169 KDVIPFEITNVGTGRNTQGHRFLGEE-VSIDAPSSYEELLKEQHVIADPKVRKQMIQSQL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ + D+DLL E+ LVE+ GSF+ ++L LPEE++ T+K +Q+ F Sbjct: 228 DALAADKKWNIPIDEDLLNEVNQLVEYPTALYGSFESEFLSLPEEVLVTTMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 288 KDENGNLLPHFITVRNGN-SHAIENVARGNEKVLRARLSDAAFFYKEDQ----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 K N+D + + +L+ ++VFH ++G+ G++V R + K+A + AD Sbjct: 336 ---KLNIDAN------VKKLE--NIVFHEELGSLGDKVRRAAAIAGKLAVRLKADEQTQK 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR +VP Sbjct: 385 LVKRAAEISKFDLVTHMIYEFPELQGVMGEKYARMLGEDEAVAAAVNEHYMPRAAGGDVP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V+LADKLDT+ +F++I+ P+GS+DPY LRR GI+ I+++ I + + Sbjct: 445 STFTGAVVALADKLDTIASFFSIDVIPTGSQDPYGLRRQASGIVSILIDRNWGISFKELL 504 Query: 530 -----EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 E +N +L FF RLK L+ DIRHD+IEA+L + V + L + + Sbjct: 505 SLTETEKENELLDFFTQRLKYVLNAEDIRHDVIEAVLDSTDLEPYAAVHKARVLEKHLGT 564 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 F +A+ + ++++I +K S +I P E EK+L+ + ES Sbjct: 565 P---GFKETAEALGRVISISKKGE---SRDIKPDLFENEQEKKLFDAYQKTKDSVAESFA 618 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y Q L + EPIE +F+ +VN D+ ++ NRL+ + + ++I N+ ++ Sbjct: 619 SKNYEQALTALSGLKEPIEDYFNHTMVNADNEALKTNRLAQMTALADVIKSFANMNHLI 677 >gi|288942696|ref|YP_003444936.1| glycyl-tRNA synthetase subunit beta [Allochromatium vinosum DSM 180] gi|288898068|gb|ADC63904.1| glycyl-tRNA synthetase, beta subunit [Allochromatium vinosum DSM 180] Length = 691 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 215/722 (29%), Positives = 348/722 (48%), Gaps = 59/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + + + LK G+ ++ + + P RL L +KG+ Sbjct: 5 DLLIEIGTEELPPIALPVLSRAFTEGVRDQLKTHGIGFETVESFAAPRRLALLVKGIQTR 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ R GP V G KA+ GF RS G++ + +++ KG + Sbjct: 65 QPDQENVRRGPAVQAAFDAEGQPTKALLGFARSCGVEV--EALGREETDKGSWLVHRSIT 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R ++ + A+ +P PK MRW ++RP+ + +L E + Sbjct: 123 PGRETAQLVPDMTEAALAGLPIPKRMRWGDRSE-----EFVRPVHWVCLLLGTESIAGTV 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 + L P T GHRFH P PI + Y L E+ V E RR I Sbjct: 178 MGL-----PTETRTRGHRFHHPAPIAIGQASDYAATLREQGRVEPSFELRRERIREQVMS 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA++ L D +LL+E+ LVEW Q + FD+++L +P E++ T+++NQK F Sbjct: 233 LAASNRLRARIDPELLDEVTALVEWPQALLCKFDERFLEIPPEVLIETMQSNQKYFPVED 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D + GN RV+ R DA FW +D Sbjct: 293 MNGALQARFIAVANIESHDPDQ-VRAGNERVIRPRFSDAAFFWSQD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L +PL+ RL+ VVF K+GTQ + +R+ LG+++AQ I D ALV+RA Sbjct: 338 ------LKQPLEAFAPRLET--VVFQDKLGTQAAKCARVARLGRELAQAIGVDPALVERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL T +V EFP LQG +G+ YA E+ A+E+ +PR + +PT+ Sbjct: 390 AALSKCDLMTAMVFEFPGLQGTMGRYYAERSGEDACVSAAMEDQYRPRFAGDELPTSPCG 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN-------------KI 521 ++LAD+LDTL+ + I +P+G+KDPYALRRA++ ++R+++E Sbjct: 450 RALALADRLDTLVGIFGIGLRPTGTKDPYALRRASIAVLRLLIETPLDLDLRDLLERAAA 509 Query: 522 DIPLSQFIED--QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 P ED + ++ + +RL+ Y DR + D +E+++ N + I + + Sbjct: 510 GFPAGLLAEDTVEAVLGYMLERLRGYYSDRVVAVDTVESVIHTGVTNPWDLDRRIVAVTQ 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KRI IL + + +P L+ E+RL I++ T ++ Sbjct: 570 FRRLPAADALAAANKRIRNILLKADPADL-TEGGPNPALLVEVPEQRLAERIAELETRVE 628 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y I + L + E ++ FFD+V+V DD R NRL LL+ + + L V ++ Sbjct: 629 PLARARDYVAILETLAELREDVDAFFDEVMVMADDPATRRNRLQLLRSLSALFLRVADIS 688 Query: 700 KI 701 ++ Sbjct: 689 RL 690 >gi|157829149|ref|YP_001495391.1| glycyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801630|gb|ABV76883.1| glycyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] Length = 670 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 233/691 (33%), Positives = 355/691 (51%), Gaps = 67/691 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + EE I+ ++ + P R+ L+ L + K EE G Sbjct: 19 IPAFMQKNAEEGYLNIFTKIF-EENEIFAKVQVFAGPRRITLHATHLPKITLPKEEEIKG 77 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 78 PSIEAPEAAINGFCKA---HNVSKLELPTKLISNQLYYFFVKKTEEREIKEILPEIIIEA 134 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E I+ + + NITYG Sbjct: 135 INKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYG 184 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR ++V + Y L E V+L+ R I LA++ L + ED L+E Sbjct: 185 HRLTDNKKLEVTDFEDYRNKLLENHVILERAKREEIIKTGLLELANSHELIIKEDNRLVE 244 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + Sbjct: 245 EVVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRF 304 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 ++ ++QGN +V++ARL DAL+F K+ D++K L+ R+ + Sbjct: 305 TN-AELVIQGNEKVLSARLSDALYFCKQ--------------------DIAKTLESRLGQ 343 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L+ V FHAK+G E++ RI + IA + D+ R L K+DL +E+VREFP Sbjct: 344 LEA--VTFHAKLGNLREKIERITDICNYIAP-NNKDLITAAR---LCKSDLVSEMVREFP 397 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + N AI++H KP+G +NVP+ ++ KLD+L+ Sbjct: 398 DLQGIMGYYYAKHEGLNAEIAAAIKDHYKPQGLSDNVPSGNAALLALAD-KLDSLVGLMI 456 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------EDQNLIL-FF 538 E P+GS DPYALRR LGIIRIILENK+++ + I E++NLI+ FF Sbjct: 457 AGETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFF 516 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R K Y +D DI LI A+L + NL+ + L EF G++ L + KR Sbjct: 517 EERAKFYFKNDYDIA--LINAVL---DLNLVDTNFKLDELKEFLIEDAGKQLLNAYKRAS 571 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 572 NIIG-----DQKITGLVDVSLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSL 626 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 PI FFD VLVN D ++ NRLSLLQ I Sbjct: 627 LTPITSFFDNVLVNDSDPKIAQNRLSLLQNI 657 >gi|260556987|ref|ZP_05829204.1| glycyl-tRNA synthetase beta subunit [Acinetobacter baumannii ATCC 19606] gi|260409593|gb|EEX02894.1| glycyl-tRNA synthetase beta subunit [Acinetobacter baumannii ATCC 19606] Length = 689 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 212/719 (29%), Positives = 366/719 (50%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D ++ Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---QV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 IEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQG 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRTLPEAAALAAANKRVANILAKEAAPEGSV-VEAN---LVEDAEKALFAELQAVTPVVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADV 684 >gi|184159639|ref|YP_001847978.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii ACICU] gi|332876124|ref|ZP_08443908.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6014059] gi|238691009|sp|B2HZR3|SYGB_ACIBC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|183211233|gb|ACC58631.1| Glycyl-tRNA synthetase, beta subunit [Acinetobacter baumannii ACICU] gi|322509549|gb|ADX05003.1| glyS [Acinetobacter baumannii 1656-2] gi|323519569|gb|ADX93950.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii TCDC-AB0715] gi|332735742|gb|EGJ66785.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6014059] Length = 689 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 212/719 (29%), Positives = 366/719 (50%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D ++ Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---QV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 IEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQG 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRTLPEAAALAAANKRVANILAKEAAPEGSV-IEAN---LVEDAEKALFAELQAVTPVVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADV 684 >gi|254455912|ref|ZP_05069341.1| glycyl-tRNA synthetase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207082914|gb|EDZ60340.1| glycyl-tRNA synthetase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 688 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 215/707 (30%), Positives = 350/707 (49%), Gaps = 58/707 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F LE++SEEIP+ +Q EDL + + ++ + TP+RL + +GL Sbjct: 1 MSEFFLELFSEEIPSSLQKNLREDLLGNFNKFFNDRLISFKKGSSFSTPNRLIILFEGLQ 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL- 119 K EE GP + A + A++GF+RS IS + K + K KRL Sbjct: 61 KQVVLKSEEIKGPNINAPEIALEGFIRSNN---ISKNDLYKKTIDNKEFYFFKTKLKRLN 117 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 ++L+ +P ++K+ W KSM+W + W RPLKSIL + K+K+I D Sbjct: 118 TYELLEEFIPKTLEKIQWKKSMKWGNYN-----LKWGRPLKSILAVF----DKKKLI-FD 167 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N T+ + + + Y ++ ++++ E R+N I + + + Sbjct: 168 FHHLSSSNTTFIDKEFEENKKIFTNFKDYNNFFKKLNIIINQELRKNLIEKKFNEILTKK 227 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 +++ ++ LL+E++ L + V + FD+K+L +P+E++ +T++ +QK F T +G + Sbjct: 228 NIKIEKNTRLLDEVVDLTDQPNVLLCEFDRKFLNIPKEILIITMQNHQKYFPTFDNKGNI 287 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F++V+N Q D I GN RVV ARL DA FW +D+ Sbjct: 288 TNEFLVVTNKQ--DKKGFIKLGNERVVEARLSDAEFFWFKDK------------------ 327 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 S L +++++L ++ + +GT ++V R+R LG ++ + V+ + + K Sbjct: 328 --SHNLVKKVSKLKSMN--YFKGLGTYFDKVQRMRKLGGMLSDELLISKEKVELSASVCK 383 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL +E+V EFPELQG +G +A Q AI E P G +P SI +SL Sbjct: 384 VDLVSELVGEFPELQGIMGGYFAEAQGFEKDVSLAISEQYLPIGSDSKIPKKPYSIALSL 443 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------SQ 527 ADK+DTL+ F+ IN+KP+ SKDPYALRR LGIIRII +NK D + Q Sbjct: 444 ADKIDTLVGFFGINQKPTSSKDPYALRRLALGIIRIIAQNKKDFKIRDLISYSSSLYVDQ 503 Query: 528 FIEDQNLIL------FFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEF 580 E QN L F +RLK ++ + IRHD+I+A + N D+++ I K LN+ Sbjct: 504 GFEFQNKFLQKDLSEFLMERLKFFMKEEKIRHDIIQASVNSFNLDHIVVIFGKAKCLNKI 563 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 G + S KR I+ E K + E+S P + EK L+ I++ + Sbjct: 564 IRKPNGIDLISSYKRASNIIESEIKNQKIELSNSTDPGIFKTDFEKNLFKKINELSKYFN 623 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + + + L + + FFD V+VN +D ++ NRL L+Q Sbjct: 624 SINKDENFEKSLTYLADSKKVVFDFFDNVIVNEEDTTIKKNRLELIQ 670 >gi|299768625|ref|YP_003730651.1| glycyl-tRNA synthetase subunit beta [Acinetobacter sp. DR1] gi|298698713|gb|ADI89278.1| glycyl-tRNA synthetase subunit beta [Acinetobacter sp. DR1] Length = 689 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 212/719 (29%), Positives = 364/719 (50%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + + Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLNFAAIEAYAAPRRLALKIVDIDTAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K +L + ++I Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----KDDQI 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 VDATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQVTIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F++++L +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRANFEERFLAVPQEALITTMQDNQKYFCLINA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSPITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++DI + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDITIEELVNLALQG 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRTLPEAAALAAANKRVANILAKEAAPEGSV-VEAN---LVEDAEKALFAELQAVTPAVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADV 684 >gi|255656411|ref|ZP_05401820.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-23m63] gi|296450142|ref|ZP_06891903.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP08] gi|296878523|ref|ZP_06902528.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP07] gi|296260905|gb|EFH07739.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP08] gi|296430330|gb|EFH16172.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP07] Length = 688 Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 233/737 (31%), Positives = 375/737 (50%), Gaps = 86/737 (11%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVY 109 S + EE GP A K A+D GF++S GL SD K+ K + Sbjct: 61 SDRQSDLEEEIKGP---AKKIAVDAENNLTKPALGFIKSKGLSE-SDIYFKQ-VGKDEYI 115 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 116 FATIKQDGKETSEVLKDILPDTIKSVVFPKAMRWGGKN-----LKFARPIRWIVTLL--- 167 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 168 --NDKVLEFDLEGIVSSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIR 225 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ Sbjct: 226 KQCIEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRY 285 Query: 290 FVTRTREGVLANCFILVSNIQAS--DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F +EG L FI V N + D A GN +V+ ARL DAL F++ D NL Sbjct: 286 FPV-LKEGKLLPNFIAVRNGDSYRIDNVKA---GNEKVLEARLADALFFYREDTKR--NL 339 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 S E + VVF K+GT ++ R+ L A ++D+ Sbjct: 340 ESYIEK--------------------LKTVVFQVKLGTIYDKTLRLEKLS---ADILDS- 375 Query: 408 VALVD------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + LVD RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH P Sbjct: 376 LGLVDEKADTIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLP 435 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P + +S+ADKLD+++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ Sbjct: 436 RFAGDILPKTNAGVALSIADKLDSIVGFFAIGIQPTGSQDPYALRRQALGILSILMDRKV 495 Query: 522 DIPLSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + + IE + ++ FF++R+K D IR+D+++A+L + + Sbjct: 496 AVDIKVLIEHALDNYSELDFNREEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDIN 555 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 ++ + LN + + + L + R+ + E S +I L +AE Sbjct: 556 DVSDMHMRALELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEI 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +LY +++ + K+Y D S+ ++ FD V+V +D +++NRL+LL Sbjct: 610 KLYNEFKQVKVRVKQLLKDKKYGVALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALL 669 Query: 686 QYIKNIILIVINVQKIV 702 + + + +L + ++ KIV Sbjct: 670 KQVYDTMLEICDLSKIV 686 >gi|331001256|ref|ZP_08324882.1| glycine--tRNA ligase, beta subunit [Parasutterella excrementihominis YIT 11859] gi|329568983|gb|EGG50779.1| glycine--tRNA ligase, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 696 Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 227/712 (31%), Positives = 371/712 (52%), Gaps = 61/712 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKG 58 M L+EI +EE+P + ++ + L LKE+ + N + Y +P R+ + Sbjct: 1 MASLLIEIQTEELPPKALDNLSKAFAKELTFSLKEQDLALPNAQVTAYGSPRRIAALISD 60 Query: 59 LSPHSPEK-IEERLGP-RVG---AGKK--AIDGFLRSTGLQ-TISDCQIKKDPKKGD-VY 109 +S +P+K ++L P +VG GK A+ +++ G++ S+ ++ D K+ VY Sbjct: 61 VSEVAPDKPFRQKLVPVKVGLDAEGKATPALSKKMKALGIECEPSELKVVNDGKQDQLVY 120 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 K ++D L+ + A++++P PK M + + F +RP+K ++ + E Sbjct: 121 EGT--KAGVSLKDGLQIALDHAVRRLPIPKVMSYQLENGKTVEF--VRPVKHLVALFDKE 176 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAI 228 I+ ++L + G T GHRFH PI ++ + Y +E E ++ E R+N + Sbjct: 177 -----IVPVELFGLKAGRETMGHRFHVKEPISIKEAEKYAEQMEKEGKIVASFEERKNKM 231 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A + E++ DL+ E+ L EW V+ FD+++L +P E + LT++ NQK Sbjct: 232 VGELKSAAEKLNAEIIMPDDLVNEVAALTEWPVVYESGFDEEFLTVPAECLILTMQQNQK 291 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F R + L N F+LVS I+A DGG AI GN+RVV ARL DA F+ DQ+ L L Sbjct: 292 YFALRDKNKKLMNRFLLVSQIEAKDGGEAIRSGNARVVRARLADAKFFY--DQDRLQTLE 349 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 S R+ L VV+H K+GTQ ER R++ + +IA+ I AD Sbjct: 350 S------------------RVPGL--AHVVYHNKLGTQLERSERVQKIASRIAEQIGADP 389 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 AL RA L+KADL T +V EFPELQG +G+ YA E+ AI EH +PR + + Sbjct: 390 ALARRAAKLAKADLRTLMVGEFPELQGIMGEYYAHHDKEDDKVALAIREHYQPRYAGDEL 449 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ S+ V+LADK++TL + I + P+G KDP+ALRR LGI+R+++E ++ + L + Sbjct: 450 PSTPESLAVALADKIETLTGLFGIGQLPTGEKDPFALRRHALGILRMLIEKELPLSLDKL 509 Query: 529 I----EDQNLI-----------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 I E+++++ FFHDRL++ D+ +E+++ E L + Sbjct: 510 IAIGTEEESVVPGVKDATEELKQFFHDRLRVMQKDQGFTAHEVESVIGSEPAILADVPKR 569 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K +++F S + E + KRI IL +K ++ + P L + EK LY I Sbjct: 570 LKAVHDFMSLPEAESLAAANKRIENIL---KKNTLPLADAVDPALLTEKEEKDLYEAIRT 626 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ RY L + P++ FFD+V+VN +D +R NRL+LL Sbjct: 627 LEPKLEADYKAGRYEDELRSLAPLKAPVDAFFDKVMVNAEDEALRRNRLTLL 678 >gi|157804240|ref|YP_001492789.1| glycyl-tRNA synthetase subunit beta [Rickettsia canadensis str. McKiel] gi|229558574|sp|A8F071|SYGB_RICCK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157785503|gb|ABV74004.1| glycyl-tRNA synthetase subunit beta [Rickettsia canadensis str. McKiel] Length = 667 Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 223/689 (32%), Positives = 360/689 (52%), Gaps = 64/689 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ K AE + + + EE I+ ++ + P R+ L+ L + K G Sbjct: 13 IPAFMQ-KNAEKGYLNVFTKIFEENKIFAKVKVFVGPRRITLHATHLPKVTLPKDTAIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 72 PSLNASEAAINGFCKA---HNVSKLELFTKLINNQLYYFFIKKTEEREIKEILPEIIIEA 128 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W + W+RPL++ILCI E I+ + + NITYG Sbjct: 129 INKYSWTKSMFWGDYN-----IKWVRPLRNILCIFDGE-----ILPMQFGHLTANNITYG 178 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR I+V++ + Y L E V+L+ R I LA++ L + ED L+E Sbjct: 179 HRLTDNKKIEVENFEDYKNKLSENHVILERTKREEIIKAGLLELANSHDLTIKEDNRLIE 238 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E+ GL E+ V +G K+L LP+E++ +++ +QK F + G A F+ VSN + Sbjct: 239 EVSGLTEFPVVLLGRIPLKFLELPKEVLISSMRRHQKYFCLFDKAGNFAPYFLFVSNGRF 298 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 + +++GN +V+AARL DAL+F+K+ D++K L+ +++ Sbjct: 299 VN-AELVIKGNEKVLAARLADALYFYKQ--------------------DIAKTLESNLSK 337 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L L V FH K+G E+V RI + IA + D+ + A L K+DL +E+V EFP Sbjct: 338 L--LAVTFHVKLGNLREKVDRITNICNYIAP-NNKDLIM---AAKLCKSDLVSEMVGEFP 391 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + AI++H KP+G +NVP ++ ++ ADK+D+L+ Sbjct: 392 DLQGIMGYYYAKHDGLDEEVATAIKDHYKPQGLSDNVPNGNAAL-LATADKIDSLVGLMI 450 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------EDQN---LILFF 538 E P+GS DPYALRR LGIIRII+ENK+++ L+ I D+N +I F Sbjct: 451 AGEAPTGSGDPYALRRQALGIIRIIIENKLELNLNDLINFSINLYKDSSDKNKDLIISFL 510 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R+K Y ++ DI LI A+L ++L+++ + L +F + G++ L + KR Sbjct: 511 KERIKFYFKNNYDI--SLINAVLDLSAEDLVSVSLKLNTLQKFLAEDAGKQLLNAYKRAS 568 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ +++I+ + ++EK L+AV+ I +S+ K Y ++ +LL S+ Sbjct: 569 NIIG-----DQKITGLVDGNLFTTQSEKELFAVMQKILPQIIDSITDKDYERVLNLLSSL 623 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 PI FF VLVN D ++ NRLSLLQ Sbjct: 624 LAPITSFFGNVLVNDPDPKIVQNRLSLLQ 652 >gi|262280266|ref|ZP_06058050.1| glycyl-tRNA synthetase subunit beta [Acinetobacter calcoaceticus RUH2202] gi|262258044|gb|EEY76778.1| glycyl-tRNA synthetase subunit beta [Acinetobacter calcoaceticus RUH2202] Length = 689 Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 210/719 (29%), Positives = 365/719 (50%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKNLRDALQAETVKGLKDAGLNFASIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K +L + ++I Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVLLL-----KDDQI 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 VDATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F++++L +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRANFEERFLAVPQEALITTMQDNQKYFCLINS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-IQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSAITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQG 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRALPEAAALAAANKRVANILAKEAAPEGSV-VEAN---LVEDAEKALFAELQAVTPVVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ + +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAIADV 684 >gi|255101590|ref|ZP_05330567.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-63q42] Length = 688 Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 234/737 (31%), Positives = 375/737 (50%), Gaps = 86/737 (11%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVY 109 S + EE GP A K A+D GF++S GL SD K+ K+ ++ Sbjct: 61 SDRQNDLEEEIKGP---AKKIAVDAENNLTKPALGFIKSKGLSE-SDIYFKQVGKEEYIF 116 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 117 -ATIKQDGKETSEVLKDILPETIKSVVFPKAMRWGGKN-----LKFARPIRWIVTLL--- 167 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 168 --NDKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIR 225 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ Sbjct: 226 KQCIEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRY 285 Query: 290 FVTRTREGVLANCFILVSNIQAS--DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F +EG L FI V N + D A GN +V+ ARL DAL F++ D NL Sbjct: 286 FPV-LKEGKLLPNFIAVRNGDSYRIDNVKA---GNEKVLEARLADALFFYREDTKR--NL 339 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 S E + VVF K+GT ++ R+ L A ++D+ Sbjct: 340 ESYIEK--------------------LKTVVFQVKLGTIYDKTLRLEKLS---ADILDS- 375 Query: 408 VALVD------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + LVD RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH P Sbjct: 376 LGLVDEKADTIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLP 435 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ Sbjct: 436 RFAGDILPKTNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKV 495 Query: 522 DIPLSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + + IE + ++ FF++R+K D IR+D+++A+L + + Sbjct: 496 AVDIKVLIEHALDNYSELDFNKEEVVEQIMSFFNERVKNLFKDLGIRYDVVDAVLSSDIN 555 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 ++ + LN + + + L + R+ + E S +I L +AE Sbjct: 556 DVSDMHMRALELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEI 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +LY + E + K+Y D S+ ++ FD V+V +D +++NRL+LL Sbjct: 610 KLYNEFKQVKVKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALL 669 Query: 686 QYIKNIILIVINVQKIV 702 + + + +L + ++ KIV Sbjct: 670 KQVYDTMLEICDLSKIV 686 >gi|332968464|gb|EGK07530.1| glycyl-tRNA synthetase beta subunit [Psychrobacter sp. 1501(2011)] Length = 697 Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 219/733 (29%), Positives = 369/733 (50%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ SEE+P + + L + LK+ + Y +++ P RL L ++G+S Sbjct: 1 MSTILFELGSEELPPKSLKPLRDSLQASVESQLKDADISYDSLKVMAAPRRLSLLIEGIS 60 Query: 61 PHSPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++IE++ GP V A GK +A +GF + G+ I+ D KGD L Sbjct: 61 DKQPDRIEQKRGPAVKAAYDSEGKPTRAAEGFAKGLGIDVSELMTIETD--KGDYIGYEL 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L I A+ +P K MR + ++RP+K + +L+ +D Sbjct: 119 TVQGQETTELLPNIFQNALDNLPIAKRMRSGASRE-----EFVRPVKWL--VLMQDD--- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ ++ + GN T GHR+H+P P+ + Y LE A V++D + R+ I+ Sbjct: 169 QVVPATIQGLQSGNQTLGHRYHSPEPMVIPHAKDYESVLEAAKVIVDFDRRQQLIVEAVQ 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +L+ V E + +DLL+E+ LV+ SF++++L +P+E + T++ +QK F Sbjct: 229 KLSDEVNAEAIVPQDLLDEVTALVDLPVALRASFEERFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI +SNI++ D + +V GN +VV RL DA F+ +DQ Sbjct: 289 DKEGKLQPYFIFISNIESKDP-SQVVSGNEKVVRPRLADAEFFFLQDQK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK---------KIAQLI 404 + +++++ L R VF K+GT E+ RI L IA Sbjct: 337 --QPLIEMAESLKNR---------VFQDKLGTIWEKSERIAKLATFIARQLKEHAIADYA 385 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D +V RA +LSKADL + +V EFPELQG G YA L E + AIEE P+ Sbjct: 386 DIEVEQATRAAMLSKADLTSTLVGEFPELQGVAGTYYARLNGEPETIAAAIEEQYLPKFS 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P I I ++LAD+LDTL+ + I++ P+GSKDP++LRR+ +G++RI++E K+ I Sbjct: 446 GDVLPQTAIGICLALADRLDTLVGIFGIDQAPTGSKDPFSLRRSAIGVLRILIEKKLPIN 505 Query: 525 LSQFIE-----------DQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L + +E D++ L F + R + ++ I D I+A+L + L Sbjct: 506 LKELVEQAINNYQGKLADESKTLTQVMDFINSRYRAMYTEQGISVDSIQAVLAINSHVPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + ++EF + + KR+ ILA K E+S +++ L EAEK LY Sbjct: 566 DFDQRLHAVSEFRNLPQAATLAEINKRVANILA---KSEGEVSDQVTEDLLAEEAEKTLY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++ + Y++I L ++ P+ FFD V+VN +D ++ NRL+LL+ + Sbjct: 623 QAVTKAEATVAPLQADANYNEILQSLATLEAPLTGFFDNVMVNSEDEALKANRLTLLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V +V ++ Sbjct: 683 RELFLTVADVGEL 695 >gi|303256200|ref|ZP_07342216.1| glycyl-tRNA synthetase, beta subunit [Burkholderiales bacterium 1_1_47] gi|302860929|gb|EFL84004.1| glycyl-tRNA synthetase, beta subunit [Burkholderiales bacterium 1_1_47] Length = 696 Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 227/712 (31%), Positives = 371/712 (52%), Gaps = 61/712 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKG 58 M L+EI +EE+P + ++ + L LKE+ + N + Y +P R+ + Sbjct: 1 MASLLIEIQTEELPPKALDNLSKAFAKELAFSLKEQDLALPNAQVTAYGSPRRIAALISD 60 Query: 59 LSPHSPEK-IEERLGP-RVG---AGKK--AIDGFLRSTGLQ-TISDCQIKKDPKKGD-VY 109 +S +P+K ++L P +VG GK A+ +++ G++ S+ ++ D K+ VY Sbjct: 61 VSEVAPDKPFRQKLVPVKVGLDAEGKATPALSKKMKALGIECEPSELKVVNDGKQDQLVY 120 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 K ++D L+ + A++++P PK M + + F +RP+K ++ + E Sbjct: 121 EGT--KAGVSLKDGLQIALDHAVRRLPIPKVMSYQLENGKTVEF--VRPVKHLVALFDKE 176 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAI 228 I+ ++L + G T GHRFH PI ++ + Y +E E ++ E R+N + Sbjct: 177 -----IVPVELFGLKAGRETMGHRFHVKEPISIKEAEKYAEQMEKEGKIVASFEERKNKM 231 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A + E++ DL+ E+ L EW V+ FD+++L +P E + LT++ NQK Sbjct: 232 VGELKSAAEKLNAEIIMPDDLVNEVAALTEWPVVYESGFDEEFLTVPAECLILTMQQNQK 291 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F R + L N F+LVS I+A DGG AI GN+RVV ARL DA F+ DQ+ L L Sbjct: 292 YFALRDKNKKLMNRFLLVSQIEAKDGGEAIRSGNARVVRARLADAKFFY--DQDRLQTLE 349 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 S R+ L VV+H K+GTQ ER R++ + +IA+ I AD Sbjct: 350 S------------------RVPGL--AHVVYHNKLGTQLERSERVQKIASRIAEQIGADP 389 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 AL RA L+KADL T +V EFPELQG +G+ YA E+ AI EH +PR + + Sbjct: 390 ALARRAAKLAKADLRTLMVGEFPELQGIMGEYYAHHDKEDDKVALAIREHYQPRYAGDEL 449 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ S+ V+LADK++TL + I + P+G KDP+ALRR LGI+R+++E ++ + L + Sbjct: 450 PSTPESLAVALADKIETLTGLFGIGQLPTGEKDPFALRRHALGILRMLIEKELPLSLDKL 509 Query: 529 I----EDQNLI-----------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 I E+++++ FFHDRL++ D+ +E+++ E L + Sbjct: 510 IAIGTEEESVVPGVKDATEELKQFFHDRLRVMQKDQGFTAHEVESVIGSEPAILADVPKR 569 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K +++F S + E + KRI IL +K ++ + P L + EK LY I Sbjct: 570 LKAVHDFMSLPEAESLAAANKRIENIL---KKNTLPLADAVDPALLTEKEEKDLYEAIRT 626 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ RY L + P++ FFD+V+VN +D +R NRL+LL Sbjct: 627 LEPKLEADYKAGRYEDELRSLAPLKAPVDAFFDKVMVNAEDEALRRNRLTLL 678 >gi|215919288|ref|NP_820891.2| glycyl-tRNA synthetase subunit beta [Coxiella burnetii RSA 493] gi|206584172|gb|AAO91405.2| glycyl-tRNA synthetase beta chain [Coxiella burnetii RSA 493] Length = 692 Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 231/704 (32%), Positives = 364/704 (51%), Gaps = 65/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P++ ER GP V A A GF +S G +S Q+K K KKG+ + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCG---VSTAQLKVKKTKKGEFIYCEIE 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + D+L I+ A++++P PK+MRW H ++RP+ I+ +L + Sbjct: 125 QPGQNTLDLLPNIIQSALKQLPTPKAMRWGD-HKEF----FVRPVHWIILMLGKDLVPAT 179 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ K C T GHRFH P I V D Y + L MV+ D E RR I + Sbjct: 180 LLG---KMASCE--TRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQ 234 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 235 KAASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLKLPPEVLITTMKVHQRTFPIK 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 294 NKNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND------------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L R Sbjct: 340 -------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAAR 390 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N + Sbjct: 391 AGLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLL 450 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 451 SPCVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAK 510 Query: 533 ----------NLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N++ F +RL+ + ++++ + A+L D+ L IK + Sbjct: 511 NNYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQ 570 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 F + + + + KR+ IL +K+ E+ S I +AE L + + Sbjct: 571 HFQTLPEADALAAANKRVSNIL---KKQAAELKSKTIDHSLFDSDAEHLLADQLKERAEL 627 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y + L S+ EPI+IFFD+V+V VDD+E R+NR Sbjct: 628 VNNLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENR 671 >gi|169794555|ref|YP_001712348.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AYE] gi|213158873|ref|YP_002320871.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB0057] gi|215482143|ref|YP_002324325.1| Glycyl-tRNA synthetase beta chain(Glycine--tRNA ligasebeta chain) (GlyRS) [Acinetobacter baumannii AB307-0294] gi|301348164|ref|ZP_07228905.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB056] gi|301511530|ref|ZP_07236767.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB058] gi|301595664|ref|ZP_07240672.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB059] gi|332856634|ref|ZP_08436243.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013150] gi|332868664|ref|ZP_08438311.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013113] gi|226737044|sp|B7GVW2|SYGB_ACIB3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737045|sp|B7IA77|SYGB_ACIB5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238688065|sp|B0V7W2|SYGB_ACIBY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169147482|emb|CAM85343.1| glycyl-tRNA synthetase, beta chain [Acinetobacter baumannii AYE] gi|213058033|gb|ACJ42935.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB0057] gi|213988471|gb|ACJ58770.1| Glycyl-tRNA synthetase beta chain(Glycine--tRNA ligasebeta chain) (GlyRS) [Acinetobacter baumannii AB307-0294] gi|332727027|gb|EGJ58517.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013150] gi|332733236|gb|EGJ64431.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013113] Length = 689 Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 211/719 (29%), Positives = 366/719 (50%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLNFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGL--QTISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ + +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVEQLSTFQAGKVEKV--CYLKDVKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D ++ Sbjct: 125 --QSLDTLLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---QV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +L Sbjct: 173 IEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 233 ADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 EGKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++L+D+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 450 TIALSDRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQG 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F R + D+ + D+++A+ + L + +N Sbjct: 510 YGDIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E + +E + L+ +AEK L+A + ++ Sbjct: 570 FRTLPEAAALAAANKRVANILAKEATPEGSV-VEAN---LVEDAEKALFAELQAVTPVVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ PI+ FFD V+V DD ++ NRL LL ++N+ V +V Sbjct: 626 PLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADDAGLKANRLRLLAQLRNLFTAVADV 684 >gi|329119287|ref|ZP_08247974.1| glycyl-tRNA synthetase beta subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327464634|gb|EGF10932.1| glycyl-tRNA synthetase beta subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 686 Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 211/674 (31%), Positives = 352/674 (52%), Gaps = 62/674 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + ++ + ++ + GP V GA KA++GF RS G I +I Sbjct: 49 YASPRRLAVQVQNVKAVQDDQHVVKKGPAVANAMKDGAPTKALEGFARSCGAD-IGSLKI 107 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW-STTHSPISAFSWIRP 158 D K+ DVY + + + ++L+ I+ A++K+P PK MRW S+TH+ ++RP Sbjct: 108 IHDGKQ-DVYAHEFTQAGKPLAELLEDIINQAVKKLPIPKVMRWGSSTHT------FVRP 160 Query: 159 LKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMV 217 + ++ + A ++ ++ + GN T GHRF + I +++ D Y + E+ V Sbjct: 161 VHGLVILHGA-----NVVPANVLGLQSGNTTLGHRFLSDGLITIENADSYAEQMREQGKV 215 Query: 218 LLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEE 277 + R+ AI ++ A + + D+ LL+E+ LVEW V F+ +L +P+E Sbjct: 216 IASFATRKAAIQTALNQHAGRLNATVAADEALLDEVSALVEWPVVLEAGFEAHFLEVPQE 275 Query: 278 LIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFW 337 + LT++ NQK F G L N F+LVSN++A+D + I+ GN RV+ ARL DA F+ Sbjct: 276 CLILTMQQNQKYFPLLDANGRLMNRFLLVSNLEAADP-SHIIHGNERVLRARLSDAEFFY 334 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 K+DQ N L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 335 KQDQKNT--------------------LESRLPKL--ANVVYHNKIGSQAERIERLQSIA 372 Query: 398 KKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 A + AD A +RA L+KADL TE+V EFPELQG +GK YA L EN + DA+E+ Sbjct: 373 AHTAAALGADRAQAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGENAAIADALEQ 432 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H +PR + +P + ++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R+++ Sbjct: 433 HYRPRFAGDALPESPVATAVALADKLETLVGIWGIGLVPTGDKDPYALRRAALGILRMLM 492 Query: 518 ENKIDI------PLSQF----IEDQN---LILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 ++ +D+ + F + D+ + F RL + L + D D++ A+L Sbjct: 493 QHGLDVNDLIQTAFASFPQGLLNDKTPAEVADFMQARLAVLLQN-DYPQDIVAAVLAKRL 551 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L + + + F + + + KR+ +L +K + E+ ++ L + E Sbjct: 552 GRLNDLAAKLDAVASFKALPEAAALAAANKRVQNLL---KKADAELG-AVNEALLQQDEE 607 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 LYA I+ ++ + + L ++ ++ FFD V+V DD V+ NRL+L Sbjct: 608 HALYAAAQAMQPKIEAALARQDFQAALSELAAVKPQVDAFFDGVMVMADDTAVKQNRLNL 667 Query: 685 LQYIKNIILIVINV 698 L + + V ++ Sbjct: 668 LNQLSQQMNAVADI 681 >gi|118581462|ref|YP_902712.1| glycyl-tRNA synthetase subunit beta [Pelobacter propionicus DSM 2379] gi|118504172|gb|ABL00655.1| glycyl-tRNA synthetase beta chain [Pelobacter propionicus DSM 2379] Length = 687 Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 224/727 (30%), Positives = 362/727 (49%), Gaps = 71/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LEI +EEIPA +A ++ ++ L + Y ++ TP RL L +K + Sbjct: 5 ELFLEIGTEEIPAGFIPRAMAEMEAMITRELTNARLSYSTVQTMATPRRLALVVKDIPAV 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P+ GP A GK KA +GF R G+ T+ QI KG+ YLAV + Sbjct: 65 QPDAEITATGPSKKAAFDADGKPTKAAEGFARGQGV-TVDQLQIVTT-DKGE-YLAVTKT 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L I+P I +P+ KSMRW + RP+ I+ + Sbjct: 122 ETGRPTPELLSEILPAMIASIPFKKSMRWGDLD-----VRFARPIHWIVALF-----DGI 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I G+++ GHRF A V++ HY+ + E V++DPE R+ I ++HR Sbjct: 172 VVPFVFGNIESGSVSRGHRFMANTSFPVRNFSHYLDECERHFVIVDPERRKELIRRESHR 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+A G L+ D++LLE+I LVE+ G+F +++L +P+E++ +++++Q+ F Sbjct: 232 VAAAAGGHLLPDEELLEQITYLVEYPSAVHGTFSREFLKVPKEVLITSMRSHQRYFSIVD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI ++N D G +V+GN RV+ ARL DA F++ DQ Sbjct: 292 GQGNLMPGFITINNTLTDDPGV-VVKGNERVLRARLSDARFFFEEDQK------------ 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 LD+R+ L VV+ K+GT E++ R R L +++A ++ V + R Sbjct: 339 --------VKLDERVEELK--KVVYQQKLGTSFEKMERFRALAEELADRLNPAVKSETSR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL + +V EFPE+QG +G+EYA+L+ E+ AI EH P +P + I Sbjct: 389 AAWLCKADLVSGMVGEFPEVQGIMGREYALLEGESGDVACAIAEHYLPIQAGGELPASDI 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 VS+ADKLDT+ +++ P+G+ DPYALRRAT+GII IIL+ + L+ I D++ Sbjct: 449 GAFVSIADKLDTICGCFSVGLIPTGAADPYALRRATIGIIAIILDRGYRLGLASLI-DRS 507 Query: 534 LIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L L FF R + L + D +EA + E D+L+ + + Sbjct: 508 LDLLEAKLLRPKEQVATEVLEFFRGRF-VNLLGGEFDADAVEAAVSAEFDDLVDVKSRVA 566 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L +F S E ++ KRI I+ K +L + P AE LY + Sbjct: 567 ALAQFKSHPDFEPLAVAFKRIGNII-----KGGTDAL-VDPSLFQDAAEGALYQAFHEVK 620 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 H+ ++ + + + P++ FFD+V+V +D+ VR NRL+LL I + + Sbjct: 621 VHVSALVEQGAWQDALTRIAGLRAPVDGFFDKVMVMAEDQRVRSNRLALLTAIDRMFGRI 680 Query: 696 INVQKIV 702 + +I Sbjct: 681 ADFSRIA 687 >gi|239993757|ref|ZP_04714281.1| glycyl-tRNA synthetase subunit beta [Alteromonas macleodii ATCC 27126] Length = 692 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 207/701 (29%), Positives = 350/701 (49%), Gaps = 62/701 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+E+ +EE+P + E + L + + + ++ + P RL +Y+ GL+ Sbjct: 7 LVELGTEELPPKALKSLGEAFATQFEAALTQADLSFDSVSWFAAPRRLAVYVSGLAEGQA 66 Query: 65 EKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 +K+ E+ GP V A KA G+ R G+ ++ D KG+ L P Sbjct: 67 DKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGIDVADAERLVTD--KGEWLLHKAHVPG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + ++L+ ++ A+ K+P PK MRW ++ +IRP+ + LC+L + +++ Sbjct: 125 QSVAELLEGLINQAVSKLPIPKPMRWGNYNT-----QFIRPVHT-LCVLYGSE----VVN 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + G + GHRFH ++ D+Y LE+ VL D E R++ + A Sbjct: 175 VSVLGLTSGRVVQGHRFHGEGRFELDHADNYASALEQQYVLADFEARKDKVRQQLEDAAQ 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 ++ L+ ++DLLEEI LVEW V FD+ +L +P+E + T+K +QK +G Sbjct: 235 SLSLKPDYNEDLLEEIASLVEWPVVLQAGFDEAFLAVPKEALIYTMKDDQKYVPLLDSDG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N F+ V+NI++ D + ++ GN +V+ RL DA F F Sbjct: 295 ALSNTFLFVTNIESRDA-SQVISGNEKVIRPRLADAEFF--------------------F 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N D L+ R+ L+ V+F ++GT E+ RI L IA IDA+ RA +L Sbjct: 334 NSDKKTTLESRLESLET--VLFQKQLGTLKEKSERISALSAFIASQIDANETQAARAGLL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL + +V EFP++QG +GK YA+ E+ +A+ E PR + +P++ +S +V Sbjct: 392 AKTDLMSNMVMEFPDVQGVMGKYYALNDGEDAPVAEALYEQYMPRFAGDALPSSGVSASV 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------- 529 +LADKLDTL+ + I + P G KDP+ALRRA +G++RI+ E + + L + Sbjct: 452 ALADKLDTLVGIFGIGQLPKGDKDPFALRRAAIGVLRIVTELSLPLDLETLVSKAIDVYG 511 Query: 530 ------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 E Q ++ F R L D+ I D+I+A+ + + +++F + Sbjct: 512 DKLTNAETQAQVVDFVLGRFTALLQDQAIAIDVIQAVAARRPTKPADYLARVHAVDKFRA 571 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E + KR+ ILA K+N E+ S+ I L EAEK LY + + Sbjct: 572 LEEAEALAAANKRVANILA---KQNVEVTDSVNIDESLLAEEAEKALYVELKAAQKEVDI 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 ++ + Y +I L ++ I+ FFD V+V DD V++NR Sbjct: 629 AVPSQDYTRILTALATLRNVIDNFFDNVMVMADDEAVKNNR 669 >gi|300813849|ref|ZP_07094154.1| glycine--tRNA ligase, beta subunit [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512036|gb|EFK39231.1| glycine--tRNA ligase, beta subunit [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 692 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 224/733 (30%), Positives = 376/733 (51%), Gaps = 74/733 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE+P+R + A E + + L E + Y ++ Y TP RL LY+ G+ Sbjct: 1 MNRYLLEIGVEELPSRFVNLAMEQIREKIEKSLNENDLKYDSLEVYATPRRLSLYINGIF 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-LAV 112 + +E GP V G K ++GF++S Q IS +++ KG+ Y A+ Sbjct: 61 DRQDDINKEVKGPSVKISFDEDGNPTKPLEGFMKS---QNISLKDLEQREVKGNKYVFAI 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++K ++VLK I+P I + P++M+W + + RP++ I+ IL Sbjct: 118 IKKRGLDAKEVLKNIIPDMIYHINLPRNMKWGGKN-----IKFPRPIRWIVSIL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++++ + IP NIT GHRF I + ++D+Y + LEE V+LD R I ++ Sbjct: 168 DEVVEFPFEGIPVSNITRGHRFLGSDNIVIDNVDNYAKLLEENFVILDQNRREEIIRFES 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++A ++G E+ E+KDLLEE++ +VE+ G+ K++L LP+E+I T+ + + Sbjct: 228 KKIARSLGGEIKENKDLLEELVYIVEYPTPIKGTIKKEFLILPKEVITTTMIDHLRYTPI 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI + N D +++GN +V+ ARL DA F++ D Sbjct: 288 YDDKGELLPYFITIRN-GNHDYEDVVIKGNEKVLGARLSDAKFFYEED------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVA 409 +SKPL+ + L V F K+G E+ R + +I ++ D + Sbjct: 335 --------ISKPLEDYVDALS--GVNFLDKLGNMREKEERNEAIALEIGKNLEVADETLE 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R LSKADL T +V EF ELQG +G YA L E AI E PR +++P Sbjct: 385 SLKRTAYLSKADLTTHMVVEFTELQGIMGSIYAKLSGEKDIVNSAIYEQYLPRFKGDDLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN----KIDIPL 525 + S+ADK+DT+ +AI++ P+GS DP+ LRR+ +G+I II N +D L Sbjct: 445 KTTVGSIYSIADKIDTISGLFAIDKVPTGSLDPFGLRRSAIGLINIIRNNNWELNLDSIL 504 Query: 526 SQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 SQ + + +NL FF R+K+ L D D R+D+I+AIL E D + I Sbjct: 505 SQALYEYVNKMGLTLNYEAVMKNLKEFFKQRIKVMLEDLDYRYDVIDAILESE-DKIHII 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYA 629 ++ +F KF+ S +RI+ + + + E K E+ + +AEK+L++ Sbjct: 564 FKKAPQVDRWFKENDRSKFVDSFERIYNLTSKVSEFK------EVDAELFKEDAEKKLFS 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I + ++ + +++ +L S+ I+ FFD+V+V D +RDNRL+L+ ++ Sbjct: 618 QIENIKAELEAYNNANKFYDYLNLCDSLTPYIDEFFDKVMVMDKDTSIRDNRLALINRVE 677 Query: 690 NIILIVINVQKIV 702 N++ + ++KIV Sbjct: 678 NVVSRIFAIEKIV 690 >gi|282882490|ref|ZP_06291111.1| glycyl-tRNA synthetase, beta subunit [Peptoniphilus lacrimalis 315-B] gi|281297632|gb|EFA90107.1| glycyl-tRNA synthetase, beta subunit [Peptoniphilus lacrimalis 315-B] Length = 692 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 224/733 (30%), Positives = 377/733 (51%), Gaps = 74/733 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE+P+R + A E + + L E + Y ++ Y TP RL LY+ G+ Sbjct: 1 MNRYLLEIGVEELPSRFVNLAMEQIREKIEKSLNENDLKYDSLEVYATPRRLSLYINGIF 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-LAV 112 + +E GP V G K ++GF++S Q IS +++ KG+ Y A+ Sbjct: 61 DRQDDINKEVKGPSVKISFDEDGNPTKPLEGFMKS---QNISLKDLEQREVKGNKYVFAI 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++K ++VLK I+P I + P++M+W + + RP++ I+ IL Sbjct: 118 IKKRGLDAKEVLKNIIPDMIYHINLPRNMKWGGKN-----IKFPRPIRWIVSIL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++++ + IP NIT GHRF I + ++D+Y + LEE V+LD R I ++ Sbjct: 168 DEVVEFPFEGIPVSNITRGHRFLGSDNIVIDNVDNYAKLLEENFVILDQNKREEIIRFES 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++A ++G E+ E+KDLLEE++ +VE+ G+ K++L LP+E+I T+ + + Sbjct: 228 KKIARSLGGEIKENKDLLEELVYIVEYPTPIKGTIKKEFLILPKEVITTTMIDHLRYTPI 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI + N D +++GN +V+ ARL DA F++ D Sbjct: 288 YDDKGELLPYFITIRN-GNHDYEDIVIKGNEKVLGARLSDAKFFYEED------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVA 409 +SKPL+ + L V F K+G E+ R + +I ++ D + Sbjct: 335 --------ISKPLEDYVDALS--GVNFLDKLGNMREKEERNEAIALEIGKNLEVADETLE 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R LSKADL T +V EF ELQG +G YA L E AI E PR +++P Sbjct: 385 SLKRTAYLSKADLTTHMVVEFTELQGIMGSIYAKLSGEKDIVNSAIYEQYLPRFKGDDLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN----KIDIPL 525 + S+ADK+DT+ +AI++ P+GS DP+ LRR+ +G+I II N +D L Sbjct: 445 KTTVGSIYSIADKIDTISGLFAIDKVPTGSLDPFGLRRSAIGLINIIRNNNWELNLDSIL 504 Query: 526 SQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 SQ + + +NL FF R+K+ L D D R+D+I+AIL E D + I Sbjct: 505 SQALYEYVNKMGLTLNYEAVMKNLKEFFKQRIKVMLEDLDYRYDVIDAILESE-DKIHII 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYA 629 ++++F KF+ S +RI+ + + + E K E+ + +AEK+L++ Sbjct: 564 FKKAPQVDKWFKENDRSKFVDSFERIYNLTSKVSEFK------EVDAELFKEDAEKKLFS 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I + ++ + +++ +L S+ I+ FFD+V+V D +RDNRL+L+ ++ Sbjct: 618 QIENIKAELEAYNNANKFYDYLNLCDSLTPYIDEFFDKVMVMDKDTSIRDNRLALINRVE 677 Query: 690 NIILIVINVQKIV 702 N++ + ++KIV Sbjct: 678 NVVSRIFAIEKIV 690 >gi|161830292|ref|YP_001597730.1| glycyl-tRNA synthetase subunit beta [Coxiella burnetii RSA 331] gi|189082266|sp|A9NB99|SYGB_COXBR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|161762159|gb|ABX77801.1| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 331] Length = 689 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 231/704 (32%), Positives = 364/704 (51%), Gaps = 65/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P++ ER GP V A A GF +S G +S Q+K K KKG+ + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCG---VSTAQLKVKKTKKGEFIYCEIE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + D+L I+ A++++P PK+MRW H ++RP+ I+ +L + Sbjct: 122 QPGQNTLDLLPNIIQSALKQLPTPKAMRWGD-HKEF----FVRPVHWIILMLGKDLVPAT 176 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ K C T GHRFH P I V D Y + L MV+ D E RR I + Sbjct: 177 LLG---KMASCE--TRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 232 KAASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIK 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 291 NKNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND------------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L R Sbjct: 337 -------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAAR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N + Sbjct: 388 AGLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLL 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 448 SPCVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAK 507 Query: 533 ----------NLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N++ F +RL+ + ++++ + A+L D+ L IK + Sbjct: 508 NNYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQ 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 F + + + + KR+ IL +K+ E+ S I +AE L + + Sbjct: 568 HFQTLPEADALAAANKRVSNIL---KKQAAELKSKTIDHSLFDSDAEHLLADQLKERAEL 624 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y + L S+ EPI+IFFD+V+V VDD+E R+NR Sbjct: 625 VNNLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENR 668 >gi|30581049|sp|P45651|SYGB_COXBU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 689 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 231/704 (32%), Positives = 364/704 (51%), Gaps = 65/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P++ ER GP V A A GF +S G +S Q+K K KKG+ + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCG---VSTAQLKVKKTKKGEFIYCEIE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + D+L I+ A++++P PK+MRW H ++RP+ I+ +L + Sbjct: 122 QPGQNTLDLLPNIIQSALKQLPTPKAMRWGD-HKEF----FVRPVHWIILMLGKDLVPAT 176 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ K C T GHRFH P I V D Y + L MV+ D E RR I + Sbjct: 177 LLG---KMASCE--TRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 232 KAASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLKLPPEVLITTMKVHQRTFPIK 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 291 NKNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND------------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L R Sbjct: 337 -------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAAR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N + Sbjct: 388 AGLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLL 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 448 SPCVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAK 507 Query: 533 ----------NLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N++ F +RL+ + ++++ + A+L D+ L IK + Sbjct: 508 NNYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQ 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 F + + + + KR+ IL +K+ E+ S I +AE L + + Sbjct: 568 HFQTLPEADALAAANKRVSNIL---KKQAAELKSKTIDHSLFDSDAEHLLADQLKERAEL 624 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y + L S+ EPI+IFFD+V+V VDD+E R+NR Sbjct: 625 VNNLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENR 668 >gi|126700048|ref|YP_001088945.1| glycyl-tRNA synthetase subunit beta [Clostridium difficile 630] gi|122973600|sp|Q182B8|SYGB_CLOD6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|115251485|emb|CAJ69318.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Clostridium difficile] Length = 688 Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 234/737 (31%), Positives = 375/737 (50%), Gaps = 86/737 (11%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVY 109 S + EE GP A K A+D GF++S GL SD K+ K+ ++ Sbjct: 61 SDRQNDLEEEIKGP---AKKIAVDAENNLTKPALGFIKSKGLSE-SDIYFKQVGKEEYIF 116 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 117 -ATIKQDGKETSEVLKDILPETIKSVVFPKAMRWGGKN-----LKFARPIRWIVALL--- 167 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 168 --NDKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIR 225 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ Sbjct: 226 KQCIEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRY 285 Query: 290 FVTRTREGVLANCFILVSNIQAS--DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F +EG L FI V N + D A GN +V+ ARL DAL F++ D NL Sbjct: 286 FPV-LKEGKLLPNFIAVRNGDSYRIDNVKA---GNEKVLEARLADALFFYREDTKR--NL 339 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 S E + VVF K+GT ++ R+ L A ++D+ Sbjct: 340 ESYIEK--------------------LKTVVFQVKLGTIYDKTLRLEKLS---ADILDS- 375 Query: 408 VALVD------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + LVD RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH P Sbjct: 376 LGLVDEKTDTIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLP 435 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ Sbjct: 436 RFAGDILPKTNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKV 495 Query: 522 DIPLSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + + IE + ++ FF++R+K D IR+D+++A+L + + Sbjct: 496 AVDIKVLIEHALDNYSELDFDKEEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDIN 555 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 ++ + LN + + + L + R+ + E S +I L +AE Sbjct: 556 DVSDMHMRALELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEI 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +LY + E + K+Y D S+ ++ FD V+V +D +++NRL+LL Sbjct: 610 KLYNEFKQVKIKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALL 669 Query: 686 QYIKNIILIVINVQKIV 702 + + + +L + ++ KIV Sbjct: 670 KQVYDTMLEICDLSKIV 686 >gi|224824601|ref|ZP_03697708.1| glycyl-tRNA synthetase, beta subunit [Lutiella nitroferrum 2002] gi|224603094|gb|EEG09270.1| glycyl-tRNA synthetase, beta subunit [Lutiella nitroferrum 2002] Length = 686 Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 219/671 (32%), Positives = 346/671 (51%), Gaps = 68/671 (10%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQI 99 + +P RL L L + P++ + GP V AG K A+ GF RS G++ +S+ Sbjct: 49 FASPRRLALTLPAVLAVQPDQTIVKKGPAVAAGMKDGQPTPALAGFARSCGVE-VSELST 107 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY K + + VL IV +A++K+P PK MRW S ++RP+ Sbjct: 108 MSDGKQ-DVYAYRSVKAGQPLAAVLSDIVALALKKLPAPKLMRWGD-----SEHQFVRPV 161 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + +E +++ L + T GHRF + + + D Y R L E+ V+ Sbjct: 162 HGLVLLHGSELIAGEVLGLKSR-----RATLGHRFLSAGEVTLPDADSYARVLYEQGKVV 216 Query: 219 LDPECRRNAILNDAHRLASA---VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLP 275 E RR I HRLA A +G + ++ L++E+ LVEW V F+ ++L +P Sbjct: 217 ASFEARRELIR---HRLAEASAKLGAVIAAEQALVDEVTALVEWPVVLEAGFEAEFLKVP 273 Query: 276 EELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALH 335 +E + LT++ NQK F G L N F+LVSN++A+D + I+ GN RV+ ARL DA Sbjct: 274 QECLILTMQQNQKYFPLLDAHGKLMNRFLLVSNLEATDP-SHIIHGNERVLRARLSDAKF 332 Query: 336 FWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV 395 F+++DQ L+ R+ RL DVV+H KIG+Q ERV R++ Sbjct: 333 FFEQDQKVR--------------------LESRLPRL--ADVVYHNKIGSQLERVERLQN 370 Query: 396 LGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 L IA + A+V RA L+KADL +++V EFPELQG +G YA E+ + AI Sbjct: 371 LAGTIAGKLGANVDDARRAAYLAKADLVSDMVGEFPELQGIMGMYYARHDGEHEAVAAAI 430 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 E H PR +++P ++++V+LADKL+T++ W I P+G KDP+ALRRA LG++R+ Sbjct: 431 EGHYHPRFAGDSLPHGPVALSVALADKLETIVGIWGIGLVPTGDKDPFALRRAALGVLRM 490 Query: 516 ILENKIDI--------------PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 +L+ +D+ LS + D+ + F +RLK +L D + D I+A+L Sbjct: 491 VLDTPLDLKQLIVDTHDSFPANKLSASVADE-VFAFCLERLKNFLA-ADYKVDEIDAVLA 548 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 E L + ++ + +F + + KR+ IL +K E+ + ++P L Sbjct: 549 LEPTRLDEVRAVLAAVAQFKQLPEAATLAAANKRVKNIL---KKAEGEVGV-VNPALLAE 604 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 +AEK LY + + + L S+ P++ FFD V+V DD VR NR Sbjct: 605 DAEKALYGAVQQLAPQVDAQFAAHDFAGALAQLASLKAPVDAFFDGVMVMADDSAVRINR 664 Query: 682 LSLLQYIKNII 692 ++LL + + Sbjct: 665 IALLARLAELF 675 >gi|3861374|emb|CAA15273.1| GLYCYL-TRNA SYNTHETASE BETA CHAIN (glyS) [Rickettsia prowazekii] Length = 648 Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 231/689 (33%), Positives = 349/689 (50%), Gaps = 75/689 (10%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKI----EERLG 72 MQ A E I + EE I+ ++ + P R+ L+ + H P+ I EE G Sbjct: 1 MQKNAEEGYLKIFTKIF-EENEIFAKVQVFAGPRRITLH----ATHVPKVILPKEEEIKG 55 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S + + +Y ++K K R +++L I+ A Sbjct: 56 PSIEAPEIAINGFCKA---HNVSKLDLSTKLRNNKLYYFFVKKTKERETKEILPKIIIDA 112 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E I+ L + NITYG Sbjct: 113 INKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNNITYG 162 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR +++ ++Y L E V+L+ R I LA+A L + +D L+E Sbjct: 163 HRLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDVCLIE 222 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E+ GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V N + Sbjct: 223 EVTGLSEFPIVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVINGRF 282 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 + I+QGN +V++ARL DAL+F+K D++K L+ R+ + Sbjct: 283 VN-TELIIQGNEKVLSARLADALYFYKN--------------------DIAKTLESRLDK 321 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L V+FH K+G+ E+V RI I + I D + A L K+DL +++V EFP Sbjct: 322 LK--SVIFHTKLGSLKEKVDRI----TDICRYIAPDNIDLIMAAKLCKSDLVSDMVGEFP 375 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + N AI +H KP+G +NVP+ ++ ++LADKLD+L+ Sbjct: 376 DLQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGNATL-LALADKLDSLVGLII 434 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------------NLILFF 538 + E P+GS DPYALRR LGIIRII+ENK++I I ++I FF Sbjct: 435 VGETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVISFF 494 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R K Y +D DI LI A+L + NL+ + L EF G++ L + KR+ Sbjct: 495 EERAKFYFKNDYDIT--LINAVL---DLNLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVS 549 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ N++I+ + + EK L+ VI I + +K Y + +LL S+ Sbjct: 550 NIMG-----NQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSL 604 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 +PI FFD VLVN D ++ NRLSLLQ Sbjct: 605 LKPITSFFDNVLVNDSDPKIAQNRLSLLQ 633 >gi|326565638|gb|EGE15801.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 12P80B1] Length = 692 Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 221/725 (30%), Positives = 357/725 (49%), Gaps = 65/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I +IRP+ + +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFIRPVHWV--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +ID ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 173 DV---VIDATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 E-------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ L + F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA K + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILA----KAGTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINV 698 V ++ Sbjct: 683 SVADI 687 >gi|255307459|ref|ZP_05351630.1| glycyl-tRNA synthetase beta chain [Clostridium difficile ATCC 43255] Length = 688 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 233/737 (31%), Positives = 374/737 (50%), Gaps = 86/737 (11%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVY 109 S + EE GP A K A+D GF++S GL SD K+ K+ ++ Sbjct: 61 SDRQSDLEEEIKGP---AKKIAVDAENNLTKPALGFIKSKGLSE-SDIYFKQVGKEEYIF 116 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 117 -ATIKQDGKETSEVLKDILPETIKSVVFPKAMRWGGKN-----LKFARPIRWIVTLL--- 167 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 168 --NDKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIR 225 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ Sbjct: 226 KQCIEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRY 285 Query: 290 FVTRTREGVLANCFILVSNIQAS--DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F +EG + FI V N + D A GN +V+ ARL DAL F++ D NL Sbjct: 286 FPV-LKEGKMLPNFIAVRNGDSYRIDNVKA---GNEKVLEARLADALFFYREDTKR--NL 339 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 S E + VVF K+GT ++ R+ L A ++D+ Sbjct: 340 ESYIEK--------------------LKTVVFQVKLGTIYDKTLRLEKLS---ADILDS- 375 Query: 408 VALVD------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + LVD RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH P Sbjct: 376 LGLVDEKADTIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLP 435 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ Sbjct: 436 RFAGDILPKTNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKV 495 Query: 522 DIPLSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + + IE + + FF++R+K D IR+D+++A+L + + Sbjct: 496 AVDIKVLIEHALDNYSELDFNKEEVVEQTMNFFNERVKNLFKDLGIRYDVVDAVLSSDIN 555 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 ++ + LN + + + L + R+ + E S +I L +AE Sbjct: 556 DVSDMHMRALELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEI 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +LY + E + K+Y D S+ ++ FD V+V +D +++NRL+LL Sbjct: 610 KLYNEFKQVKIKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALL 669 Query: 686 QYIKNIILIVINVQKIV 702 + + + +L + ++ KIV Sbjct: 670 KQVYDTMLEICDLSKIV 686 >gi|326573918|gb|EGE23868.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis O35E] Length = 692 Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 222/725 (30%), Positives = 357/725 (49%), Gaps = 65/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I +IRP+ I +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFIRPVHWI--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +ID ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 173 DV---VIDATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQK------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 342 -------------QPLFELSHHLKT--QIFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 E-------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ L + F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA K + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILA----KAGTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINV 698 V ++ Sbjct: 683 SVADI 687 >gi|259503185|ref|ZP_05746087.1| glycyl-tRNA synthetase [Lactobacillus antri DSM 16041] gi|259168842|gb|EEW53337.1| glycyl-tRNA synthetase [Lactobacillus antri DSM 16041] Length = 691 Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 217/730 (29%), Positives = 371/730 (50%), Gaps = 76/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + LKE + + ++++Y TP RL L + GL+ Sbjct: 5 YLLEVGVEEMPAHVVTPSIKQLHQRVADYLKEARISFSDIQEYATPRRLALLIHGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G T+ D + K+ KG+ Y+ V + Sbjct: 65 PDVDETVKGPAKKIAQDSDGNWTKAAIGFTRGQG-ATVDDIEFKE--VKGEEYVFVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +VL + P I + +P M+W + +IRP++ ++ +L +++ Sbjct: 122 AGKPVAEVLAGL-PEVITALNFPTLMKWGYNN-----LQFIRPIRWLVSLL-----NDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ G T GHRF H +++ + D Y+ DLE+ V++DP+ R+ I + + Sbjct: 171 VPFSILDVEAGRTTRGHRFLG-HDVELANADDYVTDLEKEFVIVDPQRRKKVISDQIDAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + +D DLLEE+ LVEW F GSFD KYL LP+E++ ++K NQ+ F R Sbjct: 230 VEEHDWVIDKDPDLLEEVNNLVEWPTAFAGSFDPKYLVLPDEVLITSMKDNQRFFYLRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + +++GN RV+ RLEDA F++ DQ Sbjct: 290 DGNLLPNFIAVRN-GNKEYLENVIKGNERVLVPRLEDAKFFYEEDQ-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 +DQ + RL V FH KI + +++ R+ V+ + I Q ++ A++A +D Sbjct: 335 ------KLTIDQYVERLKK--VSFHDKISSMYDKMQRVAVIARLIGQRLNLSAAELADLD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T++V EF ELQG +G+ YA L E AI EH P +P K Sbjct: 387 RAAHIYKFDLTTQMVGEFAELQGVMGEIYAKLFGEKDDVAAAIREHYMPISAEGALPVTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN-------KIDIPL 525 + +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + I L Sbjct: 447 LGAILAIADKLDSILSFFAVDMIPSGSNDPYALRRQAFGIVRIINDRGWHLSLLGIQPVL 506 Query: 526 SQFIEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + + D ++ + FF DRLK + R +RHD+I+A+ +ND++ T+ + Sbjct: 507 IKALADADVAIDFDLSKNASAVRNFFLDRLKQFFSGRRLRHDIIDAVTDTDNDDIETVFE 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++E A F + + + ++L I +K ++E++ ++ PQ +E +LYA + Sbjct: 567 AATAIDEHKDDA---DFKDAVEALTRVLRISKKGHQELAAQVDPQLFENPSEAKLYAAVD 623 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + + + L I E +FD+ ++ + VR+NRL+ L I + Sbjct: 624 KVAAGAVDRTVAENFTALRQLAPVITE----YFDENMIMDKNEAVRNNRLAQLAIIARLA 679 Query: 693 LIVINVQKIV 702 ++ N+ ++ Sbjct: 680 RVMGNLNDLI 689 >gi|326567137|gb|EGE17259.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC1] Length = 692 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 221/725 (30%), Positives = 357/725 (49%), Gaps = 65/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I +IRP+ I +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFIRPVHWI--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 173 DV---VIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 E-------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ L + F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA K + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILA----KAGTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINV 698 V ++ Sbjct: 683 SVADI 687 >gi|315640640|ref|ZP_07895746.1| glycyl-tRNA synthetase beta subunit [Enterococcus italicus DSM 15952] gi|315483668|gb|EFU74158.1| glycyl-tRNA synthetase beta subunit [Enterococcus italicus DSM 15952] Length = 693 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 222/732 (30%), Positives = 368/732 (50%), Gaps = 79/732 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI EE+PA + + L + +E+ + Y N+R Y TP RL + ++ + P Sbjct: 7 DVLIEIGLEEMPAHVVVPSMNQLEAKVATFFEEQHLSYDNIRAYSTPRRLAVLIEAV-PE 65 Query: 63 SPEKIEERL-GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 IEE + GP G KA GF+R GL T D K+ VY Sbjct: 66 RQADIEEEIKGPAKKIALDAEGNWSKAAQGFVRGQGL-TTDDITFKELNGVEYVYATKKT 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K+ I DVL + V I + +P +M W+ F +IRP+ ++ + E+ Sbjct: 125 TGKQTI-DVLTGLKEV-ITSLTFPVTMHWNKYD-----FEYIRPIHWVVALF-----GEE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ + GHRF H + + Y+ L E V+ D R+ I+N Sbjct: 173 VIPFEILDVKTDRHSRGHRFLG-HEVTFKRAHDYVETLAEQSVIADSAERQQLIVNQISA 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ D+DLLEE+ LVE+ F+G+F K+YL +PEE++ ++K +Q+ F RT Sbjct: 232 IAEKNKWQVFLDEDLLEEVTNLVEYPTAFVGNFAKQYLEIPEEVLVTSMKEHQRYFDVRT 291 Query: 295 REGVLANCFILVSNIQASDGG-AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI V N +D +++GN +V+ ARLEDA F++ DQ Sbjct: 292 EDGQLLPHFISVRN--GNDVAIENVIKGNEKVLTARLEDAEFFYQEDQK----------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 L ++ +++ + V FH KIG+ E+++R+ V+ + I + + A++ Sbjct: 339 -----LTIAACVEK------LKHVAFHEKIGSIYEKMTRVGVIAQIIGETVGLSSAELTD 387 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EFPELQG +G++YA+LQ E S AI EH P +P Sbjct: 388 LQRASEIYKFDLVTNMVDEFPELQGIMGEKYALLQGEKASVAAAIREHYLPIASEGELPK 447 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + + +++ADKLD+++ F+A PSGS DPYALRR T GIIRII + P + Sbjct: 448 SVVGSVLAIADKLDSVLTFFAAGMVPSGSNDPYALRRQTYGIIRIIEAKQWHFPFEKLQR 507 Query: 529 ----------------IEDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + D+N ++ F RL+ +L RDIRHD+IEA+L E ++ + Sbjct: 508 AIQEKINEDQATYGIMLSDENNLVSDFLKARLRQHLASRDIRHDVIEAVLASEQKDVSRL 567 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + +++ + + + + + R+ + +E KN +I P+ EAEK L+ Sbjct: 568 FQAAELVSQHLADQEFKPSMEALTRVMNLAKKQETKNS----DIQPELFENEAEKALFEA 623 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +++ + + + Y L ++ IE +FDQ +V VDD +R NRL+LL I Sbjct: 624 VTEVEANFATNTMAENYQA----LVALHPAIEAYFDQTMVMVDDASIRANRLALLAKISK 679 Query: 691 IILIVINVQKIV 702 ++L + ++ ++V Sbjct: 680 MVLAIASLDQLV 691 >gi|304439785|ref|ZP_07399683.1| glycyl-tRNA synthetase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371772|gb|EFM25380.1| glycyl-tRNA synthetase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 688 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 231/735 (31%), Positives = 383/735 (52%), Gaps = 86/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILI-----GLLKEEGVIYQNMRQYWTPHRLFLYLK 57 ++LLEI EE+PAR DL++I I L++ + Y+++R Y TP RL L++ Sbjct: 2 NYLLEIGMEELPARYV-----DLALIQIRDKADKFLRDNLIDYKDIRTYATPRRLTLFID 56 Query: 58 GLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 G+ + EE GP G K ++GFL+S L+ + D +IK VY Sbjct: 57 GIEEFQRDIDEEVKGPAKKIAFDEDGNPTKPLEGFLKSKNLK-LEDIEIKDLKGTEYVYG 115 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V +K ++ E++LK +P I+ + +PK+M+W + + RP++ ++ +L +E Sbjct: 116 QVHKKGEK-SEEILKVEIPSLIKGITFPKNMKWGGKN-----LKFARPIRWVVSMLDSE- 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +++ + IP G++T GHRF I++ +D+Y + LEE V+LD + R I Sbjct: 169 ----VVEFPFEGIPVGSVTRGHRFLGSSHIEIDHVDNYEKLLEENYVILDQKKRLEIIKI 224 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +A + A A+G E+ EDKDLL+E+ + E+ G+ ++YL LP E+I ++ + + Sbjct: 225 NAKKEAKALGGEIKEDKDLLDELTYINEYPTPITGNVKEEYLELPAEVITTPMRDHLRYI 284 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIV-QGNSRVVAARLEDALHFWKRD-QNNLPNLS 348 +G L FI V N +D +V +GN +V+ ARLEDA F+ D + L +L+ Sbjct: 285 PVYNEDGDLLPYFITVRN--GTDYKKEVVSKGNEKVLGARLEDAKFFYNEDIKTKLEDLN 342 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-AD 407 ++ ++F K+GT ++ RI L ++I + ++ AD Sbjct: 343 E-----------------------NLKGLMFQDKLGTMYDKSLRIDKLSREIGEKLEVAD 379 Query: 408 VALVD--RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +LVD RA LSKADL T++V EF ELQG IG Y+ LQ E AI E PR Sbjct: 380 ESLVDLKRAAELSKADLTTKMVTEFTELQGTIGSIYSKLQGEKPLVSQAIFEQYLPRFAG 439 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P I ++LADK+DT++ +AI P+GS+DP+ALRR ++G+I I+ + D+ L Sbjct: 440 DELPETTIGSILALADKIDTIVGLFAIGLIPTGSQDPFALRRLSIGVINILKDKNWDLSL 499 Query: 526 SQ--------FIEDQNLIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 S ++++ NL +F R+K L D +IR+D+I+ ++ + Sbjct: 500 SDIVDHALYTYVQENNLTFNYEEVKEKILDYFRARIKNILEDMNIRYDIIQGVIASDGTV 559 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + TI IK LNEFF + E L A LA + ++ E++ + +EK Sbjct: 560 IETIDKAIK-LNEFFKEDRTE--LTDALTRVHNLATKYEEG-----EVAEERFEDPSEKE 611 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY ++ ++ K+Y + L+ + I+ FFD +V VDD VR+NRL+LL Sbjct: 612 LYNRFESIRPDVETLINDKKYEEALLALNPLVPFIDKFFDSCMVLVDDENVRNNRLALLH 671 Query: 687 YIKNIILIVINVQKI 701 I +++ V+N++ I Sbjct: 672 LIDSLVERVVNIESI 686 >gi|157964999|ref|YP_001499823.1| glycyl-tRNA synthetase subunit beta [Rickettsia massiliae MTU5] gi|157844775|gb|ABV85276.1| Glycyl-tRNA synthetase beta chain [Rickettsia massiliae MTU5] Length = 675 Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 233/691 (33%), Positives = 354/691 (51%), Gaps = 66/691 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA M HK AE+ + + + EE I+ ++ + P R+ L+ L + K EE G Sbjct: 23 IPAFM-HKNAEEGYLNIFTKIFEENEIFAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 81 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 82 PNIEAPEAAINGFCKA---HNVSKLELSTKLISNQLYYFFIKKTEEREIKEILPEIIIEA 138 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E I+ + + NITYG Sbjct: 139 INKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPVQFGHLTANNITYG 188 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR ++V + Y L E V+L+ R I LAS+ L + ED L+E Sbjct: 189 HRLTDNKKLEVTDFEDYRNKLLENHVILERTKRETIIKTGLLELASSHDLIIKEDNRLVE 248 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E+ GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + Sbjct: 249 EVAGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRF 308 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 ++ ++QGN +V++ARL DAL+F K+ D++K L+ R+ + Sbjct: 309 TN-AELVIQGNEKVLSARLSDALYFCKQ--------------------DIAKTLESRLGQ 347 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L+ V FHAK+G E++ RI + IA + D+ R L K+DL +E+V EFP Sbjct: 348 LEA--VTFHAKLGNLREKIERITDICNYIAP-NNKDLITAAR---LCKSDLVSEMVGEFP 401 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + N I +H KP+G +NVP+ ++ KLD+L+ Sbjct: 402 DLQGIMGYYYAKHEGLNAEIAAVIRDHYKPQGLSDNVPSGNAALLALAD-KLDSLVGLMI 460 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------EDQNLIL-FF 538 E P+GS DPYALRR LGIIRIILENK+++ + I E++NLI+ FF Sbjct: 461 AGEAPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFF 520 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R K Y +D DI LI A+L + NL+ + L EF G++ L + KR Sbjct: 521 EERAKFYFKNDYDIA--LINAVL---DLNLVDTNFKLDALKEFLIEDAGKQLLNAYKRAS 575 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ ++K I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 576 NIIIGDQK----ITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSL 631 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 PI FFD VLVN D ++ NRLSLLQ I Sbjct: 632 LTPITSFFDNVLVNDSDPKIAQNRLSLLQNI 662 >gi|330813968|ref|YP_004358207.1| glycyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] gi|327487063|gb|AEA81468.1| glycyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] Length = 503 Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 194/540 (35%), Positives = 286/540 (52%), Gaps = 41/540 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+YSEEIP +Q +++ L+E Y+ + TP RL + + GL Sbjct: 1 MAQFLLELYSEEIPHGLQIDTRKNIESSFKKKLEEFSTSYKKFSVFSTPTRLCVSIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 H +E GP+VG+ ++A+ GFL+S L+ D +K KG Y ++ K + Sbjct: 61 SHLSVPSKEIKGPKVGSPEQALIGFLKSNQLEQ-KDV-FEKTIDKGSFYFIKTKQQKIDL 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + +L T VP +Q + W KSMRW+ + SW RPLKSI C+L + I+ + Sbjct: 119 QQLLATTVPEILQSLNWKKSMRWADHN-----LSWGRPLKSIFCLL-----DKHTINFNF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N Y + I ++S + Y + L++ V+LD + R IL+ + Sbjct: 169 HHLSSCNKIYVGAIYDEKNITIKSAEQYFQVLKDKNVVLDQDVREKMILSSLTSIFKKSK 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GVL 299 E + L+EE+ LV+ GSF +L LPEEL+ LT+ +Q+ F ++ E G + Sbjct: 229 CEDNPNLRLVEEVTNLVDHPTALKGSFSADFLVLPEELLNLTMMQHQRYFPMKSLETGKI 288 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFW--KRDQNNLPNLSSLKESALKF 357 N FI +SN Q D I+ GN RV+ ARL DA FW R QN + N+S L Sbjct: 289 TNSFITISNNQ--DEKKLIIDGNERVLQARLSDAKFFWDKNRRQNLVKNVSKLN------ 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 + F+ +GT ++ R+R L IA +I A+ + A + Sbjct: 341 ------------------GITFYKDLGTLYDKTQRVRQLASLIADIIGANKGDAEIAASI 382 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KADL T++V E+PELQG IGK +A+ Q + +AI EH P GP + VP +KI+I V Sbjct: 383 CKADLVTDLVGEYPELQGVIGKYFAMSQGFSPEIANAISEHYLPLGPSDKVPKDKIAICV 442 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF 537 +LADKLDTLI F+ I KP+ SKDP+ALRRA LG+IRI++ENK+ I L + I + +F Sbjct: 443 ALADKLDTLIGFFGIGLKPTSSKDPFALRRAVLGMIRIVIENKLSISLKELINNAKKFIF 502 >gi|326561407|gb|EGE11757.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 46P47B1] gi|326572304|gb|EGE22299.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC8] Length = 692 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 220/725 (30%), Positives = 357/725 (49%), Gaps = 65/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I +IRP+ + +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFIRPVHWV--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 173 DV---VIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 E-------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ L + F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA K + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILA----KAGTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINV 698 V ++ Sbjct: 683 SVADI 687 >gi|238651094|ref|YP_002916952.1| glycyl-tRNA synthetase subunit beta [Rickettsia peacockii str. Rustic] gi|259511931|sp|C4K2V3|SYGB_RICPU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238625192|gb|ACR47898.1| glycyl-tRNA synthetase subunit beta [Rickettsia peacockii str. Rustic] Length = 664 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 231/691 (33%), Positives = 354/691 (51%), Gaps = 67/691 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + EE I+ ++ + P R+ L+ L + K EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIF-EENEIFAKVQVFAGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 72 PSIEAPETAINGFCKA---HNVSKLELPTKLISNQLYYFFVKKTEEREIKEILPEIIIEA 128 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E I+ + + NITYG Sbjct: 129 INKYSWAKSMFWGDYK-----IKWIRPLRNILCIFNGE-----ILPMQFGHLTANNITYG 178 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR ++V + Y L E V+L+ R I LA++ L + ED L+E Sbjct: 179 HRLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELANSHELIIKEDNRLVE 238 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + Sbjct: 239 EVVGLSEFPIVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRF 298 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 ++ ++QGN +V++ARL DAL+F K+ D++K L+ R+ + Sbjct: 299 TN-AELVIQGNEKVLSARLSDALYFCKQ--------------------DIAKTLESRLGQ 337 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L+ V FHAK+G E++ RI + IA + D+ R L K+DL +E+V EFP Sbjct: 338 LEA--VTFHAKLGNLREKIERITDICNYIAP-NNKDLITAAR---LCKSDLVSEMVWEFP 391 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + N AI++H KP+G +NVP+ ++ KLD+L+ Sbjct: 392 DLQGIMGYYYAKHEGLNAEIAAAIKDHYKPQGLSDNVPSGNAALLALAD-KLDSLVGLMI 450 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------EDQNLIL-FF 538 E P+GS DPYALRR LGIIRIILENK+++ + I E++NLI+ FF Sbjct: 451 AGETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFF 510 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R K Y +D DI LI A+L + NL+ + L EF G++ L + KR Sbjct: 511 EERAKFYFKNDYDIA--LINAVL---DLNLIDTNFKLDELKEFLIEDAGKQLLNAYKRAS 565 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 566 NIIG-----DQKITGLVDASLFSTQPEKELFEVIQKISPEIIDSIADKDYKKALNLLSSL 620 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 PI FFD +LVN D ++ NRLSLLQ I Sbjct: 621 LTPITSFFDNILVNDSDPKIAQNRLSLLQNI 651 >gi|212217707|ref|YP_002304494.1| glycyl-tRNA synthetase subunit beta [Coxiella burnetii CbuK_Q154] gi|212011969|gb|ACJ19349.1| glycyl-tRNA synthetase beta chain [Coxiella burnetii CbuK_Q154] Length = 692 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 230/704 (32%), Positives = 363/704 (51%), Gaps = 65/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P++ ER GP V A A GF +S G +S Q+K K KKG+ + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCG---VSTAQLKVKKTKKGEFIYCEIE 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + D+L I+ A++++P PK+MRW H ++RP+ I+ +L + Sbjct: 125 QPGQNTLDLLPNIIQSALKQLPTPKAMRWGD-HKEF----FVRPVHWIILMLGKDLVPAT 179 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ K C T GHRFH P I V D Y + L MV+ D E RR I + Sbjct: 180 LLG---KMASCE--TRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQ 234 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 235 KAASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIK 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 294 NKNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND------------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L R Sbjct: 340 -------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAAR 390 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N + Sbjct: 391 AGLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLL 450 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 451 SACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAK 510 Query: 533 ----------NLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N++ F +RL+ + ++++ + A+L + L IK + Sbjct: 511 NNYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQ 570 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 F + + + + KR+ IL +K+ E+ S I +AE L + + Sbjct: 571 HFQTLPEADALAAANKRVSNIL---KKQAAELKSKTIDHSLFDSDAEHLLADQLKERAEL 627 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y + L S+ EPI+IFFD+V+V VDD+E R+NR Sbjct: 628 VNNLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENR 671 >gi|157959836|ref|YP_001499870.1| glycyl-tRNA synthetase subunit beta [Shewanella pealeana ATCC 700345] gi|189082275|sp|A8GYE8|SYGB_SHEPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157844836|gb|ABV85335.1| glycyl-tRNA synthetase, beta subunit [Shewanella pealeana ATCC 700345] Length = 689 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 225/718 (31%), Positives = 352/718 (49%), Gaps = 69/718 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE L + + +++ + P RL + + L+ Sbjct: 5 NLLIEIGTEELPPKSLRKLAESFLANFTEELTKAELSFESAVWHAAPRRLAICINQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L R Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEQAERLKTD--KGEWLLHQARV 122 Query: 115 ---KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + K LI D+ + ++ K+P PK MRW + + +IRP+ ++ +L +E Sbjct: 123 VGVETKSLIADMAQR----SLDKLPIPKPMRWGSNTT-----QFIRPVHTVTMLLGSE-- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 ++D +L I I GHRF K+ D+Y+ L+E VL D E R+ I Sbjct: 172 ---VVDGELLGIKSDRIIRGHRFMGESSFKLDHADNYLVALKEKGKVLADYEARKAIIKT 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLEDDLLEEVTSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F++ D+ + Sbjct: 289 PVFDNAGQLLPNFIFVTNIESKDP-QQIIAGNEKVVRPRLADAEFFFETDKKD------- 340 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L+ R+ L+ VVF ++GT +RV RI + IA IDA+ Sbjct: 341 -------------TLEARLTSLET--VVFQKQLGTIKQRVERISAMAGYIATSIDANSEE 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT Sbjct: 386 AARAGLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALSEQYKPKFSGDTVPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----- 525 ISI V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L Sbjct: 446 APISICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIA 505 Query: 526 -SQFIEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +Q + +NL + FF R + + D+ + D+I A+L IK Sbjct: 506 KAQELHGENLTNADVAEQVLEFFMARFRAWYQDQGVSVDVILAVLARRPTAPADFESRIK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ ILA K E+ I + L+ AEK L +++ Sbjct: 566 AVAHFRTLEQASALAAANKRVSNILA---KVEGELPAAIDDKLLVEAAEKALAEKLAELQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y + LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L Sbjct: 623 PQLAPLFAAANYQEALALLASLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFL 680 >gi|161723838|ref|NP_360953.2| glycyl-tRNA synthetase subunit beta [Rickettsia conorii str. Malish 7] gi|125987862|sp|Q92G11|SYGB_RICCN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 664 Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 232/691 (33%), Positives = 353/691 (51%), Gaps = 67/691 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + EE I+ ++ + P R+ L+ L + K EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIF-EENEIFAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 72 PSIEAPEAAINGFCKA---HNVSKLELPTKLISNQLYYFFVKKTEEREIKEILPEIIIEA 128 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E I+ + + NITYG Sbjct: 129 INKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYG 178 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR ++V + Y L E V+L+ R I LAS+ L + ED L+E Sbjct: 179 HRLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELASSHELIIKEDNRLVE 238 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + Sbjct: 239 EVVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRF 298 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 ++ ++QGN +V++ARL DAL+F K+ D++K L+ R+ + Sbjct: 299 TN-AELVIQGNEKVLSARLSDALYFCKQ--------------------DIAKTLESRLGQ 337 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L+ V FHAK+G E++ RI + IA + D+ R L K+DL +E+V EFP Sbjct: 338 LEA--VTFHAKLGNLREKIERITDICNYIAP-NNKDLITAAR---LCKSDLVSEMVGEFP 391 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + N AI +H KP+G +N+P+ ++ KLD+L+ Sbjct: 392 DLQGIMGYYYAKHEGLNAEIAAAIRDHYKPQGLSDNLPSGNAALLALAD-KLDSLVGLMI 450 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------EDQNLIL-FF 538 E P+GS DPYALRR LGIIRIILENK+++ + I E++NLI+ FF Sbjct: 451 AGETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFF 510 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R K Y +D DI LI A+L + NL+ + L EF G++ L + KR Sbjct: 511 EERAKFYFKNDYDIA--LINAVL---DLNLVDTNFKLDALKEFLIEDAGKQLLNAYKRAS 565 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 566 NIIG-----DQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSL 620 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 PI FFD VLVN D ++ NRLSLLQ I Sbjct: 621 LTPITSFFDNVLVNDSDPKIAQNRLSLLQNI 651 >gi|148244811|ref|YP_001219505.1| glycyl-tRNA synthetase beta subunit [Candidatus Vesicomyosocius okutanii HA] gi|229558586|sp|A5CW91|SYGB_VESOH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146326638|dbj|BAF61781.1| glycyl-tRNA synthetase beta subunit [Candidatus Vesicomyosocius okutanii HA] Length = 677 Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 221/715 (30%), Positives = 365/715 (51%), Gaps = 57/715 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ EE+P + + L+ L + + Y ++ + TP RL + + GL Sbjct: 5 DFLLELGCEELPPKNLQHLSNALTYNLTTEFDKLKLSYSSVESFATPRRLAVLVNGLQLQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + ER GP + KAI+GF +S G+ + +K K Y ++ D Sbjct: 65 QNNQTIERKGPLISELDKAIEGFAKSCGVA--RNMLTQKAFGKIQYYFFTKQQIGLKTID 122 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L+++V AIQ +P K MRWS + ++RP+ ++ +L ++ I+ L Sbjct: 123 LLESVVNTAIQNIPIAKPMRWSNLDT-----YFVRPVHWLIMMLGSDVVPASIMGL---- 173 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 NIT G RF + Y + L E+A + +D + R+ I +A Sbjct: 174 -ISSNITRGLRFTDECIFDIICAKDYQKTLLEKAQIEVDFDMRKAIIRKQIIHVAQNNNA 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 V D+ LL+E+ LVE+ VF G+F K+L +PEE++ +K+ QK F G L + Sbjct: 233 TAVIDESLLDEVCALVEYPCVFSGNFSSKFLDIPEEVLISVMKSYQKYFHMLDMNGNLMS 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI V+NI++SD + I+ GN RV+ +RL D+ FW +D K L+F LD Sbjct: 293 SFISVANIESSDL-SVIIDGNERVIRSRLSDSEFFWIQD----------KAYTLEFRLD- 340 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 RL+ V+F +G+ G++ RI +L IA +I A+V RA +L K+D Sbjct: 341 ---------RLN--QVLFMKSLGSMGDKAKRIEILSGYIAGVIGANVKDSSRAGLLCKSD 389 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EF +LQG +G YA EN + AI EH +PR +++P + VS+AD Sbjct: 390 LVTDMVGEFADLQGVMGGYYAFNDGENKAVSVAISEHYQPRFSGDSLPNTIEGLVVSIAD 449 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------- 531 KLDT+ + I + P+GSKDPYALRR LG++RIILE+K I L + I + Sbjct: 450 KLDTITGIFGIGQGPTGSKDPYALRRMALGLLRIILESKFHINLKELISESLNAHLSVVN 509 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ F +RL+ Y ++ + +A+L ++ I+ LN F ++ + E Sbjct: 510 TNKANDIYQFMMERLRSYYKKHEVSMQVFDAVLAVCPESPYDFHLRIRALNTFTNNQELE 569 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K ++S+++ L+ AEK L+ I S+++ + Sbjct: 570 NLIEINKRISNIL----KNCSDLSIKVDDSVLIETAEKTLFKATKILAKRISNSINYTK- 624 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + +L+ ++ + I+ FFD+V+VN DD E+R RL+L+ +++++ L V ++ +V Sbjct: 625 -NMKELI-ALKDMIDEFFDKVMVNTDDVELRQARLNLINWVRSLFLSVADISYLV 677 >gi|209363714|ref|YP_001423632.2| glycyl-tRNA synthetase subunit beta [Coxiella burnetii Dugway 5J108-111] gi|207081647|gb|ABS77223.2| glycyl-tRNA synthetase beta chain [Coxiella burnetii Dugway 5J108-111] Length = 692 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 230/704 (32%), Positives = 362/704 (51%), Gaps = 65/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P++ ER GP V A A GF +S G +S Q+K K KKG+ + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCG---VSTAQLKVKKTKKGEFIYCEIE 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + D+L I+ A++++P PK+MRW H ++RP+ I+ +L + Sbjct: 125 QPGQNTLDLLPNIIQSALKQLPTPKAMRWGD-HKEF----FVRPVHWIILMLGKDLVPAT 179 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ K C T GHRFH P I V D Y + L MV+ D E RR I + Sbjct: 180 LLG---KMASCE--TRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQ 234 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 235 KAASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIK 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 294 NKNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND------------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L R Sbjct: 340 -------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAAR 390 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N + Sbjct: 391 AGLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLL 450 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 S V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 451 SACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAK 510 Query: 532 QNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N + F +RL+ + ++++ + A+L + L IK + Sbjct: 511 NNYAVELPNVNVANQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQ 570 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 F + + + + KR+ IL +K+ E+ S I +AE L + + Sbjct: 571 HFQTLPEADALAAANKRVSNIL---KKQAAELKSKTIDHSLFDSDAEHLLADQLKERAEL 627 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y + L S+ EPI+IFFD+V+V VDD+E R+NR Sbjct: 628 VNNLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENR 671 >gi|164685872|ref|ZP_01947493.2| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165922515|ref|ZP_02219686.1| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 334] gi|164601389|gb|EAX31882.2| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165916720|gb|EDR35324.1| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 334] Length = 689 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 230/704 (32%), Positives = 363/704 (51%), Gaps = 65/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P++ ER GP V A A GF +S G +S Q+K K KKG+ + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCG---VSTAQLKVKKTKKGEFIYCEIE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + D+L I+ A++++P PK+MRW H ++RP+ I+ +L + Sbjct: 122 QPGQNTLDLLPNIIQSALKQLPTPKAMRWGD-HKEF----FVRPVHWIILMLGKDLVPAT 176 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ K C T GHRFH P I V D Y + L MV+ D E RR I + Sbjct: 177 LLG---KMASCE--TRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 232 KAASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIK 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 291 NKNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND------------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L R Sbjct: 337 -------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAAR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N + Sbjct: 388 AGLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLL 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 448 SACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAK 507 Query: 533 ----------NLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N++ F +RL+ + ++++ + A+L + L IK + Sbjct: 508 NNYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQ 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 F + + + + KR+ IL +K+ E+ S I +AE L + + Sbjct: 568 HFQTLPEADALAAANKRVSNIL---KKQAAELKSKTIDHSLFDSDAEHLLADQLKERAEL 624 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y + L S+ EPI+IFFD+V+V VDD+E R+NR Sbjct: 625 VNNLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENR 668 >gi|15620457|gb|AAL03854.1| glycyl-tRNA synthetase beta chain [Rickettsia conorii str. Malish 7] Length = 674 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 232/691 (33%), Positives = 353/691 (51%), Gaps = 67/691 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + EE I+ ++ + P R+ L+ L + K EE G Sbjct: 23 IPAFMQKNAEEGYLNIFTKIF-EENEIFAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 81 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 82 PSIEAPEAAINGFCKA---HNVSKLELPTKLISNQLYYFFVKKTEEREIKEILPEIIIEA 138 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E I+ + + NITYG Sbjct: 139 INKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYG 188 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR ++V + Y L E V+L+ R I LAS+ L + ED L+E Sbjct: 189 HRLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELASSHELIIKEDNRLVE 248 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + Sbjct: 249 EVVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRF 308 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 ++ ++QGN +V++ARL DAL+F K+ D++K L+ R+ + Sbjct: 309 TN-AELVIQGNEKVLSARLSDALYFCKQ--------------------DIAKTLESRLGQ 347 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L+ V FHAK+G E++ RI + IA + D+ R L K+DL +E+V EFP Sbjct: 348 LEA--VTFHAKLGNLREKIERITDICNYIAP-NNKDLITAAR---LCKSDLVSEMVGEFP 401 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + N AI +H KP+G +N+P+ ++ KLD+L+ Sbjct: 402 DLQGIMGYYYAKHEGLNAEIAAAIRDHYKPQGLSDNLPSGNAALLALAD-KLDSLVGLMI 460 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------EDQNLIL-FF 538 E P+GS DPYALRR LGIIRIILENK+++ + I E++NLI+ FF Sbjct: 461 AGETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFF 520 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R K Y +D DI LI A+L + NL+ + L EF G++ L + KR Sbjct: 521 EERAKFYFKNDYDIA--LINAVL---DLNLVDTNFKLDALKEFLIEDAGKQLLNAYKRAS 575 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 576 NIIG-----DQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSL 630 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 PI FFD VLVN D ++ NRLSLLQ I Sbjct: 631 LTPITSFFDNVLVNDSDPKIAQNRLSLLQNI 661 >gi|319778496|ref|YP_004129409.1| Glycyl-tRNA synthetase beta chain [Taylorella equigenitalis MCE9] gi|317108520|gb|ADU91266.1| Glycyl-tRNA synthetase beta chain [Taylorella equigenitalis MCE9] Length = 706 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 226/722 (31%), Positives = 375/722 (51%), Gaps = 79/722 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLS------IILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 L+E+++EE+P + +E + ++ I LL+ + ++ + TP RL + ++ Sbjct: 7 LIELFTEELPPKALRNLSEVFASEIVKGLVKINLLEGDSESHEKYTVFATPRRLAVLVRD 66 Query: 59 LSPHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQT--ISDCQIKKDPKKGDVY 109 + PE+ E+L P+ G A+ L S G+ +SD Q+K D K+ +Y Sbjct: 67 VLDVGPEQPFTEKLMPKKVGLDSEGNATAALTKKLESKGMGNFAVSDLQVKSDGKQDYLY 126 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L+ + + L D L+ I A+ +P PK MR+ S ++RP+ ++ + +E Sbjct: 127 LSGINAGRSLKAD-LQAIFQHAVDSLPIPKVMRYQLADGKTSV-KFVRPVHGLVAMHGSE 184 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAI 228 +ID+ I N+T+GHRF + +V S D Y + L +E MV+ R N I Sbjct: 185 -----VIDISAFGINSSNVTHGHRFMGKYSFEVSSADSYEKQLLDEGMVVASYSERMNYI 239 Query: 229 LNDAHRLASAVGLELV---EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 + ++S +GL L E +L+EE+ LVE+ ++++G F++K+L +P E + LT++ Sbjct: 240 SSKLESISSELGLNLGSGDEVNNLIEEVTSLVEYPEIYVGEFEEKFLQVPSECLILTMRL 299 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 NQK F +G L+N F++VSN++ S+ + I++GN RVV RL DA F++ D+ Sbjct: 300 NQKYFPLFNPDGSLSNKFLIVSNMKVSNP-SNIIEGNQRVVRPRLADAEFFYETDKK--- 355 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 L F + +PL VV+H KIG+Q ERV RI + K +A + Sbjct: 356 ---------LSFE-QMLEPLKT---------VVYHNKIGSQFERVERIEKIAKFLASKLG 396 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 AD +L RA +LSKADL + +V EFPELQG +G Y+ LQ E DAI++ K + Sbjct: 397 ADESLASRAALLSKADLSSNMVGEFPELQGIMGSYYSKLQGEPEEIYDAIKDQYKLKFDR 456 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-------E 518 E + S+ + LAD+++TLI W I P+G +DPY LRRA LG+I I E Sbjct: 457 EYSNKSVTSLALYLADRIETLIGIWGIGSAPTGERDPYGLRRAALGLISAIESLSGSENE 516 Query: 519 NKI--------------DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 N + DIP S IE + +F +DRLK L++ + L++++L + Sbjct: 517 NSLNLSEILHFAQTLFSDIPKSTAIEVE---VFIYDRLKNQLYNTYSKQ-LVDSVLTNKT 572 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 ++ +V IK L++F +++ + KRI IL +K N ++ I EAE Sbjct: 573 -HINDVVPRIKALSDFSKTSEASSLATANKRISNIL---KKINYQLP-AIDKTLFKAEAE 627 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++ K Y+++ L ++ + ++ FF+ V+V +D +R+NRL+L Sbjct: 628 KNLYESYVQIKDELKSKFTSKNYNEVFLKLSTLRDSVDKFFEDVMVMDEDIAIRNNRLAL 687 Query: 685 LQ 686 L+ Sbjct: 688 LK 689 >gi|326318832|ref|YP_004236504.1| glycyl-tRNA synthetase subunit beta [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375668|gb|ADX47937.1| glycyl-tRNA synthetase, beta subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 708 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 227/722 (31%), Positives = 359/722 (49%), Gaps = 68/722 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGL 59 P+ L+E++ EE+P + K + + +L+ L+ +G+ R Y +P RL ++ + Sbjct: 4 PNLLVELFVEELPPKALQKLGDAFAGVLLAQLQAQGLASAASRVTAYASPRRLAAHITEV 63 Query: 60 SPHSPEK-IEERLGP-RVG--AGKKAIDGFLR-----STGLQTISDCQIKKDPKKGDVYL 110 +P + +K + ++L P VG A A L+ + + D K ++L Sbjct: 64 APQAADKAVSQKLMPVTVGLDASGHATPALLKKLAALGADASAVPGLRRAPDGKAEALFL 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW---STTHSPI-SAFSWIRPLKSILCIL 166 + L E + K + ++ K+P PK MR+ S P ++ S++RP L Sbjct: 124 DSTVRGATLSEGLQKALQE-SVAKLPIPKVMRYQLSSGCEQPGWTSVSFVRPAHG----L 178 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECR 224 VA E ++ + + + GN T+GHRF A P+ ++S D Y + L EE V+ R Sbjct: 179 VALHGTEVLLSVSVLGLTAGNATHGHRFEADVDPVVIRSADTYAQQLAEEGAVIAAFADR 238 Query: 225 RNAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 R I A VG + +ED LL+E+ LVE V + F+K++L +P+E + LT Sbjct: 239 RAEIARQLQAAAERVGGGVRPIEDDALLDEVTALVERPNVLVCEFEKQFLDVPQECLILT 298 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 +K NQK F EG L + F++VSNI+ D +A+V GN RVV RL DA F+ +D+ Sbjct: 299 MKANQKYFPLLDAEGRLTHRFLVVSNIRPDDA-SAVVGGNERVVRPRLADAKFFFDQDRK 357 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 K L+ R+A L VV+H ++GTQGERV R+R + + IAQ Sbjct: 358 --------------------KTLESRVASLSR--VVYHNQLGTQGERVERVRAIARAIAQ 395 Query: 403 LIDADVALV---DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 I DV L D+A L+KADL T++V EFPELQG +G+ YA DAIE+H Sbjct: 396 QI-GDVELARHADQAAQLAKADLVTDMVGEFPELQGTMGRYYAQADGLPAEVADAIEDHY 454 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 KPR + +P + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E Sbjct: 455 KPRFAGDTLPRGDAGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEK 514 Query: 520 KIDIPLSQF-----------IEDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 ++ + L I+D L F +DRL L ++ ++A+L Sbjct: 515 ELPLDLETLLHSALPAFGDKIQDPTAPLADFIYDRLAGSLREQGYSAQEVDAVLALRPQR 574 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 L + + + F + + + KR+ IL KK ++ ++P L +AEK Sbjct: 575 LALVAKQLAAVRAFAALPEAPALAAANKRVTNIL----KKAGDVDAHVNPDLLREQAEKD 630 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LYA + F Y L + P++ FFD V+VN ++ ++R NR LLQ Sbjct: 631 LYAALQRFVPEADALFAAGDYTASLQTLAVLRAPVDAFFDDVMVNAEELDLRLNRQGLLQ 690 Query: 687 YI 688 + Sbjct: 691 SL 692 >gi|120612814|ref|YP_972492.1| glycine--tRNA ligase [Acidovorax citrulli AAC00-1] gi|229470691|sp|A1TUT0|SYGB_ACIAC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120591278|gb|ABM34718.1| glycyl-tRNA synthetase beta chain [Acidovorax citrulli AAC00-1] Length = 708 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 226/722 (31%), Positives = 360/722 (49%), Gaps = 68/722 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGL 59 P+ L+E++ EE+P + K + + +L+ L+ +G+ R Y +P RL ++ + Sbjct: 4 PNLLVELFVEELPPKALQKLGDAFAGVLLAQLQAQGLASAASRVTAYASPRRLAAHVTEV 63 Query: 60 SPHSPEK-IEERLGP-RVG--AGKKAIDGFLR-----STGLQTISDCQIKKDPKKGDVYL 110 +P + +K + ++L P VG A A L+ + + D K ++L Sbjct: 64 APQAADKAVSQKLMPVTVGLDASGNATPALLKKLAALGADASAVPGLRRAPDGKAEALFL 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW---STTHSPI-SAFSWIRPLKSILCIL 166 + L E + K + ++ K+P PK MR+ S P ++ S++RP L Sbjct: 124 DSTVRGATLSEGLQKALQE-SVAKLPIPKVMRYQLSSGCEQPGWTSVSFVRPAHG----L 178 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECR 224 VA E ++ + + + GN T+GHRF A P+ ++S D Y + L EE V+ R Sbjct: 179 VALHGTEVLLSVSVLGLTAGNATHGHRFEAAVDPVVIRSADTYAQQLAEEGAVIAAFADR 238 Query: 225 RNAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 R I A VG + ++D LL+E+ LVE V + F+K++L +P+E + LT Sbjct: 239 RAEIARQLQAAAEQVGGGVRPIQDDALLDEVTALVERPNVLVCEFEKQFLDVPQECLILT 298 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 +K NQK F EG L + F++VSNI+ D +A+V GN RVV RL DA F+ +D+ Sbjct: 299 MKANQKYFPLLDAEGRLTHRFLVVSNIRPDDA-SAVVGGNERVVRPRLADAKFFFDQDRK 357 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 K L+ R+A L VV+H ++GTQGERV R+R + + IAQ Sbjct: 358 --------------------KTLESRVASL--AKVVYHNQLGTQGERVERVRAIARAIAQ 395 Query: 403 LIDADVALV---DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 I DV L D+A L+KADL T++V EFPELQG +G+ YA DAIE+H Sbjct: 396 QI-GDVELARQADQAAQLAKADLVTDMVGEFPELQGTMGRYYAQADGLPAEVADAIEDHY 454 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 KPR + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E Sbjct: 455 KPRFAGDTLPRGDVGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEK 514 Query: 520 KIDIPLSQF-----------IEDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 ++ + L I+D L F +DRL L ++ ++A+L Sbjct: 515 ELPLDLETLLHSALPAFGDKIQDPTASLADFIYDRLAGSLREQGYSAQEVDAVLALRPQR 574 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 L + + + F + + + KR+ IL KK ++ ++P L +AEK Sbjct: 575 LALVGKQLAAVRAFAALPEAPALAAANKRVTNIL----KKAGDVDAHVNPDLLREQAEKD 630 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LYA + F Y L + P++ FFD V+VN ++ ++R NR LLQ Sbjct: 631 LYAALQRFVPEADALFAAGDYTGSLQTLAVLRAPVDAFFDDVMVNAEELDLRLNRQGLLQ 690 Query: 687 YI 688 + Sbjct: 691 SL 692 >gi|326560538|gb|EGE10919.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 103P14B1] gi|326576238|gb|EGE26153.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis CO72] Length = 692 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 219/725 (30%), Positives = 357/725 (49%), Gaps = 65/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I ++RP+ + +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFVRPVHWV--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 173 DV---VIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 E-------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ L + F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA K + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILA----KAGTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINV 698 V ++ Sbjct: 683 SVADI 687 >gi|189082265|sp|A9KBT7|SYGB_COXBN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 689 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 230/704 (32%), Positives = 362/704 (51%), Gaps = 65/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P++ ER GP V A A GF +S G +S Q+K K KKG+ + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCG---VSTAQLKVKKTKKGEFIYCEIE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + D+L I+ A++++P PK+MRW H ++RP+ I+ +L + Sbjct: 122 QPGQNTLDLLPNIIQSALKQLPTPKAMRWGD-HKEF----FVRPVHWIILMLGKDLVPAT 176 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ K C T GHRFH P I V D Y + L MV+ D E RR I + Sbjct: 177 LLG---KMASCE--TRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 232 KAASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIK 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 291 NKNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND------------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L R Sbjct: 337 -------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAAR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N + Sbjct: 388 AGLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLL 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 S V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 448 SACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAK 507 Query: 532 QNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N + F +RL+ + ++++ + A+L + L IK + Sbjct: 508 NNYAVELPNVNVANQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQ 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 F + + + + KR+ IL +K+ E+ S I +AE L + + Sbjct: 568 HFQTLPEADALAAANKRVSNIL---KKQAAELKSKTIDHSLFDSDAEHLLADQLKERAEL 624 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y + L S+ EPI+IFFD+V+V VDD+E R+NR Sbjct: 625 VNNLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENR 668 >gi|289164399|ref|YP_003454537.1| glycyl-tRNA synthetase beta chain [Legionella longbeachae NSW150] gi|288857572|emb|CBJ11410.1| glycyl-tRNA synthetase beta chain [Legionella longbeachae NSW150] Length = 689 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 207/719 (28%), Positives = 359/719 (49%), Gaps = 61/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A++ + +L+ L + ++Y +++Y TP R+ + + GL Sbjct: 4 DFIFELGCEELPSGSVWPLADEFANLLLTALDKAQLVYGQVKRYATPRRIAVAILGLQAQ 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP + A A+ GF++S G + +++ + VY + Sbjct: 64 QQSQRITRRGPALAAAYDKEGNPSPALLGFVKSCGAELEQLSRLETEKGAWIVYETQSQG 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K +D+L T++ A+ + K MRW + + RP+ I+ L +D + Sbjct: 124 NK--TKDLLPTLISQALATLSISKPMRWGSGDD-----EFARPVHWIVT-LYGDD----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ L I G I+ GHRFH P I + S Y ++EA V+ D RR I +L Sbjct: 172 IEYTLLGIQSGRISRGHRFHHPQQISIHSAQSYEAQMKEAFVMADFAHRRQIIQEQVKQL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ + + LL+E+ +VEW Q M F+K++L +P E + +++++QKCF + + Sbjct: 232 AASYQATAIMPESLLDEVTSIVEWPQALMADFEKEFLEVPAESLIASMQSHQKCFALKDK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI VSNI +S+ ++ GN +V+ ARL DA F+++D+ Sbjct: 292 QGNLLPHFITVSNIVSSNP-KQVIMGNEKVMRARLSDAAFFFRQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L QR+ + VVF AK+GT ++ R+ + ++ ++ +V RA Sbjct: 338 -------QALSQRIPGTE--HVVFQAKLGTLLDKALRVEAMMTYLSAALNLEVHQAQRAA 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK DL T +V EFPELQG +G YA+ E+ + A+ E PR +++P + + + Sbjct: 389 QLSKCDLLTGMVGEFPELQGLMGYYYALNDGEDQAVAHALNEQYMPRFSADSLPKSDLGL 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLA+++DTL+ +AI +KPSG KDP+ LRR L ++R+++ + + LS IE Sbjct: 449 ALSLAERVDTLVGIFAIGQKPSGVKDPFKLRRHALAVVRLLISTRAPLNLSTLIEQAITH 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L LF DRL+ Y + + DLI A +++ L + + L Sbjct: 509 YGVTVSIEPNLRHELKLFILDRLQSYYQGQGLSIDLIHAGRARQDEWLYDLDKRLSALQA 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ +LA EK + I + E EK LY I ++ Sbjct: 569 FVTLPEAASLSAACKRVNNLLAQIEK---HVLPPIKEELFEDEVEKSLYTQIKHISQAVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + LL ++ EP++ FFD+V+V VDD ++ NRL+LL +++++ V ++ Sbjct: 626 PLYRTGEYSSLLKLLATLKEPVDAFFDKVMVMVDDASIKSNRLALLVCLQDLLQGVADI 684 >gi|270157200|ref|ZP_06185857.1| glycyl-tRNA synthetase beta subunit [Legionella longbeachae D-4968] gi|269989225|gb|EEZ95479.1| glycyl-tRNA synthetase beta subunit [Legionella longbeachae D-4968] Length = 689 Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 204/719 (28%), Positives = 359/719 (49%), Gaps = 61/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A++ + +L+ L + ++Y +++Y TP R+ + + GL Sbjct: 4 DFIFELGCEELPSGSVWPLADEFANLLLTALDKAQLVYGQVKRYATPRRIAVAILGLQAQ 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP + A A+ GF++S G + +++ + VY + Sbjct: 64 QQSQRITRRGPALAAAYDKEGNPSPALLGFVKSCGAELEQLSRLETEKGAWIVYETQSQG 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K +D+L T++ A+ + K MRW + + RP+ I+ + + + Sbjct: 124 NK--TKDLLPTLISQALATLSISKPMRWGSGDD-----EFARPVHWIVTLY-----GDDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ L I G I+ GHRFH P I + S Y ++EA V+ D RR I +L Sbjct: 172 IEYTLLGIQSGRISRGHRFHHPQQISIHSAQSYEAQMKEAFVMADFAHRRQIIQEQVKQL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ ++ + LL+E+ +VEW Q M F+K++L +P E + +++++QKCF + + Sbjct: 232 AASYQATVIMPESLLDEVTSIVEWPQALMADFEKEFLEVPAESLIASMQSHQKCFALKDK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI VSNI +S+ ++ GN +V+ ARL DA F+++D+ Sbjct: 292 QGNLLPHFITVSNIVSSNP-KQVIMGNEKVMRARLSDAAFFFRQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L QR+ + VVF AK+GT ++ R+ + ++ ++ +V RA Sbjct: 338 -------QALSQRIPGTE--HVVFQAKLGTLLDKALRVEAMMTYLSAALNLEVHQAQRAA 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK DL T +V EFPELQG +G YA+ E+ + A+ E PR +++P + + + Sbjct: 389 QLSKCDLLTGMVGEFPELQGLMGYYYALNDGEDQAVAHALNEQYMPRFSADSLPKSDLGL 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLA+++DTL+ +AI +KPSG KDP+ LRR L ++R+++ + + LS IE Sbjct: 449 ALSLAERVDTLVGIFAIGQKPSGVKDPFKLRRHALAVVRLLISTRAPLNLSTLIEQAITH 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L LF DRL+ Y + + DLI A +++ L + + L Sbjct: 509 YGVTVSIEPNLRHELKLFILDRLQSYYQGQGLSIDLIHAGRARQDEWLYDLDKRLSALQA 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ +LA EK + I + E EK LY + ++ Sbjct: 569 FVTLPEAASLSAACKRVNNLLAQIEK---HVLPPIKEELFEDEVEKSLYTQVKHISQAVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + LL ++ EP++ FFD+V+V VDD ++ NRL+LL +++++ V ++ Sbjct: 626 PLYRTGEYSSLLKLLATLKEPVDAFFDKVMVMVDDASIKSNRLALLVCLQDLLQGVADI 684 >gi|167630520|ref|YP_001681019.1| glycyl-tRNA synthetase, beta subunit [Heliobacterium modesticaldum Ice1] gi|167593260|gb|ABZ85008.1| glycyl-tRNA synthetase, beta subunit [Heliobacterium modesticaldum Ice1] Length = 691 Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 225/731 (30%), Positives = 350/731 (47%), Gaps = 76/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA+ A L + L+E + Y + Y TP RL LY+K ++ Sbjct: 5 DLLLEIGTEEIPAKFIPSALAQLRQLAEKGLQEARLAYGAVETYGTPRRLTLYVKQVAAQ 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + E GP V AG KA GF RS G+ + +D G YL LR Sbjct: 65 QEDLRLEVKGPAVKAGFDKEGNPTKAAQGFARSQGVDV--SALVTRD-LAGVPYLYALRT 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R DVL ++ I + +PK MRW+ + + RP++ I+ + E+ Sbjct: 122 ESGRPARDVLPQLLQGCISGLSFPKPMRWAWGET-----RFARPIRWIVALY-----GEE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++++ + G TYGHRF PI++ Y+ LE+A V+ DP R+ I Sbjct: 172 VIPVEVEGVQAGRTTYGHRFLGGGPIELTRPSEYLERLEKAYVIADPHKRKAMIWKQITE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+AVG ++ ED+ LL+EI LVE+ G D Y+ LPE ++ +K +Q+ F ++ Sbjct: 232 LAAAVGGQVAEDEGLLDEINYLVEYPTALCGEVDADYMHLPEAVLITPMKEHQRYFPVKS 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V N A +IV+ GN +V+ ARL DA F+ DQ Sbjct: 292 PSGGLLPTFITVRNGTAEH--LSIVRAGNEKVLRARLADAAFFYAEDQKT---------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 PLD + +L +VF +GT ERV R + L +A ++ L + Sbjct: 340 ----------PLDAQKEKLK--KIVFQESLGTVYERVEREQALTAFLADCMNVPAVLREG 387 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL T +V EFPELQG +G+ YA+L E AI EH +PR + VP+ Sbjct: 388 ALRAAELAKADLVTHMVYEFPELQGIMGERYALLSGEAPEVAQAIREHYQPRFSGDAVPS 447 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 V+LADK+D ++ ++I P+GS+DPYALRR G+ +II+ + + L+ IE Sbjct: 448 TMEGTLVALADKIDAIVGCFSIGIIPTGSQDPYALRRQAQGVCQIIMRGNLPLSLAAVIE 507 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++L+ FF RL+ L + IR+D I+A+L D ++ Sbjct: 508 KSYNLYAAAGRPTRSLEETQKDLLEFFRQRLRFLLGEEGIRYDTIDAVLAEGFDQPAEVL 567 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L++F + + + R + + S I P E LY + Sbjct: 568 KRAKALSDFRQAEAFSALITAYTRAANL------AKKGGSEPIRPDLFEQATEGELYKAL 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++++ Y I + ++ ++ FFD V+V D+ +R+NRL+LL + + Sbjct: 622 QAAEEQVRQA--DGDYSTILAAVAALRPAVDAFFDAVMVMADEPVIRENRLALLNGVIGL 679 Query: 692 ILIVINVQKIV 702 V ++ K+V Sbjct: 680 TRGVADLSKLV 690 >gi|296133896|ref|YP_003641143.1| glycyl-tRNA synthetase, beta subunit [Thermincola sp. JR] gi|296032474|gb|ADG83242.1| glycyl-tRNA synthetase, beta subunit [Thermincola potens JR] Length = 698 Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 231/745 (31%), Positives = 366/745 (49%), Gaps = 96/745 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKE--------EGVIYQNMRQYWTPHRLFL 54 DFLLEI +EEIPAR A L L+KE +G + + Y TP RL + Sbjct: 4 DFLLEIGTEEIPARFMDDALVQLGAKTGELIKEYRFKTPDEKGAV----QVYGTPRRLVV 59 Query: 55 YLKGLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGD 107 + L E GP V G KA GF RS G+ + D +K + G+ Sbjct: 60 SISNLGETQESAESEAKGPSVKAAYDEQGQPTKAALGFARSQGV-AVEDLVVK-NTGAGE 117 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 AV R+ R + ++L I + +PK MRW+ ++RP++ IL L Sbjct: 118 YVFAVKREEGRNVAELLPEFCLQLINGLSFPKPMRWADHE-----MRFVRPIRWILA-LY 171 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRN 226 ED +I+ + G T GHRF ++ + Y R +E E V++DPE R+ Sbjct: 172 GED----VINFQVAGTVSGRTTKGHRFLGKGEAEIANPADYFRRIEKELFVVIDPEERKR 227 Query: 227 AILNDAHRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I + L G ED D LL+E++ LVE+ GSF+ +L LP+E++ + Sbjct: 228 RITREVEALTKQAGGYFKEDDDFRELLDEVVHLVEYPVALTGSFEPDFLKLPKEVVVTPM 287 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + +Q+ F +G L + FI +SN +D + +GN +V+ ARL DA F+ D Sbjct: 288 REHQRYFPVEKEDGQLLDKFIAISNGINND---LVREGNEKVLRARLADAKFFYDED--- 341 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 L PL + + +L +VF +GT ++V RI LG +A+ Sbjct: 342 -----------------LKVPLAENVDKLK--KIVFQESLGTVYDKVERIIKLGTYLAEA 382 Query: 404 IDADVAL---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + D A+ + RA L KADL + +V EFPELQG +GK+YA E + +AI EH Sbjct: 383 LQIDGAVQETIKRAGYLCKADLVSNMVYEFPELQGVMGKDYARHSGETDAVAEAIFEHYL 442 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P K +S+ADK+DT++ +A+ +P+GS+DPYALRR LGI +I+ + Sbjct: 443 PRFAGDILPEAKAGQILSIADKMDTVVGCFAVGIQPTGSQDPYALRRQALGICHVIVNSG 502 Query: 521 IDIPLSQFIED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + + LS ++ ++ FF R+K L ++ I +D+IEA+L Sbjct: 503 LRVSLSAMVKRAYDNYEGKIEAKLNKEETVAEVLEFFRQRIKNILENKAISYDVIEAVLA 562 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 D+L+ V+ + L + +K L + R+ + N+ + +I P L Sbjct: 563 SGYDDLIDTVNRAEALTNLRNQEIFDKLLRAYNRVANL------ANKAETEDIEPALLKE 616 Query: 622 EAEKRLY----AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 EAEK LY +F T+++E +Y Q+ + +PI+ +F+QV+V VDD + Sbjct: 617 EAEKALYKEFLTASEEFRTYLKEG----QYRQLFQRFALLQQPIDNYFEQVMVMVDDERI 672 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 ++NRL+LL+ I N++L + ++ KIV Sbjct: 673 KNNRLALLKQITNLMLPIADLTKIV 697 >gi|109896340|ref|YP_659595.1| glycine--tRNA ligase [Pseudoalteromonas atlantica T6c] gi|123361467|sp|Q15ZZ0|SYGB_PSEA6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|109698621|gb|ABG38541.1| glycyl-tRNA synthetase beta chain [Pseudoalteromonas atlantica T6c] Length = 692 Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 211/723 (29%), Positives = 358/723 (49%), Gaps = 69/723 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K A+ + L G L + Y +++ + +P RL + + GL+ Sbjct: 5 NLLVEIGTEELPPKALGKLAQAFADNLQGALDTAELKYTSIKWFASPRRLAVNVIGLAEQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 65 QEDKLIEKKGPAVSVAFDESGQATKAAQGWARSNGITVEQAERLTTD--KGEWLLFKGEA 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L ++ A++K+P PK+MRW + S+ +IRP+ ++ + A+ + Sbjct: 123 KGEQVSSLLPAMIDGALKKLPIPKAMRWGS-----SSIQFIRPVHTVTMLFGAD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ ++ I + GHRFH + D Y+ LE VL D R++ I + + Sbjct: 173 IEGNILGIDSDRVINGHRFHGEKQFSLSHADDYLAQLEAHYVLADFSARKDKIRHQVNAA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++DLL+E+ LVEW SFD +L +P+E + T+K +QK F + Sbjct: 233 AQKEDAVADMNEDLLDEVTALVEWPVALTASFDDSFLEVPKEALIYTMKDDQKYFPLIDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + F+ V+NI++ D I+ GN +V+ RL DA F Sbjct: 293 NGQLKSRFVFVTNIESKDP-MQIISGNEKVIRPRLADAEFF------------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D L+ R+ L V+F ++GT E+ RI L IA ++ +D++ RA Sbjct: 333 -FNTDKKTTLESRLESLKT--VLFQKQLGTLYEKSQRISELAGTIANMLSSDISQASRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFP++QG +G YA E+ A+ E PR + +PT+ IS Sbjct: 390 LLSKTDLMTNMVMEFPDVQGVMGMHYAKHDGEHDKVALALNEQYMPRFAGDQLPTSNISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADK+DTL+ + I + P G KDP+ALRRA +G++RI +E K+ + L+ ++ Sbjct: 450 AVAIADKIDTLVGIFGIGQVPKGDKDPFALRRAAIGVLRISVEMKLPLDLTTLVQASINS 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +I F R + + D+ I D+I+A+ I+ ++ Sbjct: 510 FGTKLTHVEDLESQVIDFILGRFRAWYQDQHIDIDVIQAVAARRPTKPADFAARIEAVSA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S A G + KR+ ILA KN+ ++ S L E+E A ++D + I+ Sbjct: 570 FKSLASGLALASANKRVANILA----KNK-VTDTNSINSSLFESEHE--AALADAMSDIE 622 Query: 640 ESMD----HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 E+++ Y + L ++ + ++ FFD V+V +D VR+NRL+LL ++ + L+V Sbjct: 623 ETVNAFVVDANYQGVFTELATLHDKVDAFFDNVMVMAEDENVRNNRLALLSKLRTLFLLV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|90019661|ref|YP_525488.1| glycine--tRNA ligase [Saccharophagus degradans 2-40] gi|89949261|gb|ABD79276.1| Glycyl-tRNA synthetase, beta subunit [Saccharophagus degradans 2-40] Length = 690 Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 208/719 (28%), Positives = 349/719 (48%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + + + L + Y + Y TP RL +++K L+ Sbjct: 4 EFLVELGTEELPPTALKTLSNAFTQGICNGLDSAKLSYSAVESYATPRRLAVWVKDLAQS 63 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 +P + + GP + GA KA + F + G++ +S+ + D K D + + Sbjct: 64 TPVEDLKVWGPPAAIAFKDGAPTKAAEAFAKKNGVE-VSELATEND-GKADKLVVNAKAG 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 D+L+ IV ++ +P K MRW + + ++RP+ + +L + ++ Sbjct: 122 GEAAADLLEGIVNASLAALPISKRMRWGASRA-----EFVRPVHWAIMLL-----NDDVL 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 L GN+T GHRFHA I +Q+ Y L E+ V+ E RR I Sbjct: 172 PATLLGKATGNVTRGHRFHANTDITIQNAQSYASTLLEQGKVVASFEDRRATIAKQVAEQ 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++G E V DLL+E+ LVEW G FD+ +L +P E + ++K +QK F Sbjct: 232 AKSLGGEAVISDDLLDEVSALVEWPVALGGRFDESFLSVPAEALISSMKEHQKYFHVVDS 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI VSNI+++D A ++ GN RV+ RL DA F++ D+ + Sbjct: 292 KGALLPYFITVSNIESTDP-AQVIDGNERVIRPRLADAAFFFETDKKS------------ 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R +L VVF AK+GT ++ RI L + IA + D + RA Sbjct: 339 --------SLEARREKLK--SVVFQAKLGTIYDKTQRITGLSQHIADKLSIDASNAVRAA 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L K+DL + +V EFPE+QG G YA+ EN + AI E P+ + +P + Sbjct: 389 QLCKSDLVSNMVYEFPEMQGIAGYSYALNDGENETVAQAIVEQYMPKFAGDTLPASDEGT 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+LAD+LDT+ + I + P+GSKDP+ALRRA+LG +R+++E ++ L I Sbjct: 449 IVALADRLDTITGIFGIGQTPTGSKDPFALRRASLGALRLLVEKGYELDLRDLITQAAGQ 508 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++++ + +R K + + +I ++ +A+ + L I + + +N F Sbjct: 509 FSDLPKADSVVEDVLAYMLERFKAWYEEANIPSEVFQAVSAKQLSTPLDINNRVYAVNSF 568 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 +S + + KR+ ILA K + E++ E+ L AE L + T + Sbjct: 569 YSLPQAAALASANKRVSNILA---KNDAEVAGEVDAALLTEAAEIALAKQVQKMQTAVTP 625 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y Q L + E ++ FFD V+V DD VR+NRL+LL ++ + L V ++ Sbjct: 626 LLAERNYEQALTTLAGLREAVDSFFDDVMVMTDDLAVRNNRLALLSKLRELFLHVADIS 684 >gi|269103825|ref|ZP_06156522.1| glycyl-tRNA synthetase beta chain [Photobacterium damselae subsp. damselae CIP 102761] gi|268163723|gb|EEZ42219.1| glycyl-tRNA synthetase beta chain [Photobacterium damselae subsp. damselae CIP 102761] Length = 689 Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 221/719 (30%), Positives = 345/719 (47%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + LK + + + + P RL L + L+ + Sbjct: 5 NFLIELGTEELPPKALRTLAEAFAANFEAELKAADLAHNGIEWFAAPRRLALKVNALAEN 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+KI E+ GP + G KA G+ R G+ ++ D KG+ L Sbjct: 65 QPDKIVEKRGPAIASAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLLFKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L + A+ K+P PK MRW + +IRP+K++ +L E + I Sbjct: 123 KGQEAKALLPELATNALAKLPIPKPMRWGDKET-----QFIRPVKTLTMLLGDELVEGTI 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + +D GHRF + + D Y LEE V+ D E R+ I+ DA + Sbjct: 178 LGVD-----SARTIRGHRFMGESEFTIDNADQYPAILEERGKVMADYEARKAIIVADAQK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG D +L+EE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAQEVGGIADLDDELVEEVTSLVEWPVVLTASFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI VSN+ + D + I+ GN +VV RL DA F Sbjct: 293 AEGNLVPKFIFVSNLISKDP-SQIIAGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ +L+ +F K+GT ++ RI L IA IDADV RA Sbjct: 334 --FNTDRKRPLIDRLPQLET--AIFQQKLGTIKDKTDRITELAGFIAAKIDADVDNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLSKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDELPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDTL+ + I + P GS DP+ALRRA LG++RII+E ++ L + + Sbjct: 450 AAVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKGYNLDLVELVAKAHE 508 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++I F R + + D D+I+A+L +K ++ Sbjct: 509 LYGDKLSNDNVESDVIEFMLGRFRAWYQDEGFSVDVIQAVLALHPTKPADFDQRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E+ + L+ +AEK L A I+ ++ Sbjct: 569 FRELDAAESLAAANKRVGNILA---KFDGELPAQWDNALLVEDAEKTLAADIAAMQATLE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y Q L S+ EP++ FFD V+V DD +++ NRL++L ++N+ L V ++ Sbjct: 626 PAFAAGNYQQALTELASLREPVDAFFDNVMVMADDEKLKVNRLTMLNALRNMFLQVADI 684 >gi|165933877|ref|YP_001650666.1| glycyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. Iowa] gi|165908964|gb|ABY73260.1| glycyl-tRNA synthetase beta chain [Rickettsia rickettsii str. Iowa] Length = 648 Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 230/687 (33%), Positives = 352/687 (51%), Gaps = 67/687 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ A E I + EE I+ ++ + P R+ L+ L + K EE GP + Sbjct: 1 MQKNAEEGYLNIFTKIF-EENEIFAKVQVFAGPRRITLHATHLPKITLPKEEEIKGPSIE 59 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVAIQKV 135 A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ AI K Sbjct: 60 APEAAINGFCKA---HNVSKLELPTKLISNQLYYFFVKKTEEREIKEILPEIIIEAINKY 116 Query: 136 PWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFH 195 W KSM W WIRPL++ILCI E I+ + + NITYGHR Sbjct: 117 SWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGHRLT 166 Query: 196 APHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 ++V + Y L E V+L+ R I LA++ L + ED L+EE++G Sbjct: 167 DNKKLEVTDFEDYRNKLLENHVILERAKREEIIKTGLLELANSHELIIKEDNRLVEEVVG 226 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGG 315 L E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + ++ Sbjct: 227 LSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFTN-A 285 Query: 316 AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDML 375 ++QGN +V++ARL DAL+F K+ D++K L+ R+ +L+ Sbjct: 286 ELVIQGNEKVLSARLSDALYFCKQ--------------------DIAKTLESRLGQLEA- 324 Query: 376 DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQG 435 V FHAK+G E++ RI + IA + D+ R L K+DL +E+VREFP+LQG Sbjct: 325 -VTFHAKLGNLREKIERITDICNYIAP-NNKDLITAAR---LCKSDLVSEMVREFPDLQG 379 Query: 436 KIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEK 495 +G YA + N AI++H KP+G +NVP+ ++ KLD+L+ E Sbjct: 380 IMGYYYAKHEGLNAEIAAAIKDHYKPQGLSDNVPSGNAALLALAD-KLDSLVGLMIAGET 438 Query: 496 PSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------EDQNLIL-FFHDRL 542 P+GS DPYALRR LGIIRIILENK+++ + I E++NLI+ FF +R Sbjct: 439 PTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFEERA 498 Query: 543 KLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 K Y +D DI LI A+L + NL+ + L EF G++ L + KR I+ Sbjct: 499 KFYFKNDYDIA--LINAVL---DLNLVDTNFKLDELKEFLIEDAGKQLLNAYKRASNIIG 553 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 +++I+ + + EK L+ VI I +S+ K Y + +LL S+ PI Sbjct: 554 -----DQKITGLVDVSLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLTPI 608 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYI 688 FFD VLVN D ++ NRLSLLQ I Sbjct: 609 TSFFDNVLVNDSDPKIAQNRLSLLQNI 635 >gi|326562179|gb|EGE12507.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 7169] Length = 692 Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 220/725 (30%), Positives = 357/725 (49%), Gaps = 65/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I +IRP+ + +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFIRPVHWV--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 173 DV---VIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQK------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 342 -------------QPLFELSHHLKT--QIFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 E-------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ L + F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA K + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILA----KAGTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINV 698 V ++ Sbjct: 683 SVADI 687 >gi|326574910|gb|EGE24840.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 101P30B1] Length = 692 Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 218/725 (30%), Positives = 356/725 (49%), Gaps = 65/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I ++RP+ + +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFVRPVHWV--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 173 DV---VIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++L +E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELFDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 E-------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ L + F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA K + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILA----KAGTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINV 698 V ++ Sbjct: 683 SVADI 687 >gi|332980880|ref|YP_004462321.1| glycyl-tRNA synthetase subunit beta [Mahella australiensis 50-1 BON] gi|332698558|gb|AEE95499.1| glycyl-tRNA synthetase, beta subunit [Mahella australiensis 50-1 BON] Length = 688 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 221/729 (30%), Positives = 366/729 (50%), Gaps = 69/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EEIPA + + + ++ + Y++MR Y TP R+ L K ++ Sbjct: 1 MNTFLLEIGCEEIPAHFMPDILDQMEQKGKAIFEQYRLPYKDMRAYGTPRRIVLIAKDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 H + + GP G KA+ GF+RS Q +S + D G Y+ Sbjct: 61 RHQQDVEQLVKGPAKKAAYGDDGQPTKALLGFMRS---QNVSVEDLIIDEINGIPYVYAH 117 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + + LK I P I + +PKSMRW ++RP++ I +L Sbjct: 118 KVQRGMQASEALKGIAPQLISTLSFPKSMRWGDMD-----IRFVRPIRWIASLL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I D+ IP G + GHRF + + D+YI +E+ V++D R++ I Sbjct: 168 DEVISFDMGGIPSGRYSRGHRFLGQPEVAIDRADNYIAIMEQQFVIVDQHRRKDMISRQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G ++D DLLEE++ LVE+ F+G+FDKKYL LP+E++ +K +Q+ F Sbjct: 228 KELADKTGGTALQDPDLLEEVVYLVEYPTAFLGNFDKKYLDLPKEVVITPMKDHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L FI V N +D + +GN +V+ ARL+DA F Sbjct: 288 KDDTGALMPYFIGVRN-GTTDYIDVVREGNEKVLRARLDDAKFF---------------- 330 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 F D+ +PL+QR+ L +VFH +GT ++ R+R L + I Q + + ++ Sbjct: 331 ----FEEDIKRPLEQRVEELK--GIVFHDGLGTLYDKTMRLRNLCRYIGQRLGLNEDMLS 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA LS+ADL T++V EF ELQG +G+EY++LQ E AI E PR ++++P Sbjct: 385 CLDRAAYLSRADLVTDMVNEFDELQGIMGREYSILQGEPKPVAQAIYEMYLPRTAVDDLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I +SLADKLDTL +++I +P+GS+DPY LRR LGI R+I E +I I L + Sbjct: 445 DTVIGTAISLADKLDTLCGYFSIGLQPTGSQDPYGLRRQALGICRMIYEKEISISLRDAV 504 Query: 530 ---------EDQN-------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +D+N ++ F R++ L D + +D+++A + + D++ + Sbjct: 505 MHSLELYDLDDENRRKTFNEVLDFIKQRVRSMLIDDGLSYDVVDAAIAADFDDICEVRRR 564 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 K + ++ + + E F+ + R + A + SL + +E +L+ D Sbjct: 565 AKIIAQWKARSDFEDFMTAFNRPNNLAA------KTDSLFVDESLFSDSSESKLWQAYKD 618 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + E++ Y + ++L + ++ FFD VLV V+D +R NRL++L+ I + Sbjct: 619 AKELLNEALAAWDYDRAYEILKGLKPAVDEFFDAVLVMVEDPAIRANRLAILKNIAELFK 678 Query: 694 IVINVQKIV 702 + + IV Sbjct: 679 AIGDFSYIV 687 >gi|332139416|ref|YP_004425154.1| glycyl-tRNA synthetase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] gi|238693287|sp|B4S277|SYGB_ALTMD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|327549438|gb|AEA96156.1| glycyl-tRNA synthetase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] Length = 692 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 206/701 (29%), Positives = 349/701 (49%), Gaps = 62/701 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+E+ +EE+P + E + L + + + ++ + P RL +Y+ GL+ Sbjct: 7 LVELGTEELPPKALKSLGEAFATQFEAALSQADLSFDSVSWFAAPRRLAVYVSGLAEGQA 66 Query: 65 EKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 +K+ E+ GP V A KA G+ R G+ ++ D KG+ L P Sbjct: 67 DKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGIDVADAERLVTD--KGEWLLHKAHVPG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + ++L+ ++ A+ K+P PK MRW ++ +IRP+ + LC+L + +++ Sbjct: 125 QSVAELLEGLINQAVSKLPIPKPMRWGNYNT-----QFIRPVHT-LCVLYGSE----VVN 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + G + GHRFH ++ D+Y LE+ VL D E R++ + A Sbjct: 175 VSVLGLTSGRVVQGHRFHGEGRFELDHADNYASALEQQYVLADFEARKDKVRQQLEDAAK 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + L+ D++LLEEI LVEW V FDK +L +P+E + T+K +QK +G Sbjct: 235 NLSLKPDYDEELLEEIASLVEWPVVLQAGFDKGFLEVPKEALIYTMKDDQKYVPLLDSDG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N F+ V+NI++ D + ++ GN +V+ RL DA F F Sbjct: 295 ALSNTFLFVTNIESHDA-SQVISGNEKVIRPRLADAEFF--------------------F 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N D L+ R+ L+ V+F ++GT E+ RI L IA IDA+ RA +L Sbjct: 334 NSDKKTTLESRLESLET--VLFQKQLGTLKEKSERISALSAFIASQIDANETQAARAGLL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL + +V EFP++QG +GK YA+ E+ +A+ E PR + +P++ +S +V Sbjct: 392 AKTDLMSNMVMEFPDVQGVMGKYYALNDGEDAPVAEALYEQYMPRFAGDALPSSGVSASV 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------- 529 +LADKLDTL+ + I + P G KDP+ALRRA +G++RI+ E + + L + Sbjct: 452 ALADKLDTLVGIFGIGQLPKGDKDPFALRRAAIGVLRIVTELSLPLDLETLVSKAIDVYG 511 Query: 530 ------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 E Q ++ F R L D+ I D+I+A+ + + +++F + Sbjct: 512 NKLTNAETQTQVVDFVLGRFNALLQDQAIAIDVIQAVAARRPTKPSDYLARVHAVDKFKA 571 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E + KR+ ILA K+N E+ ++ I L +AEK LY + ++ Sbjct: 572 LEEAEALAAANKRVANILA---KQNVEVTATVNIDESLLAEDAEKALYVELKAAQKEVEI 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 ++ + Y +I L ++ I+ FFD V+V DD V+ NR Sbjct: 629 AVPSQDYTRILTTLATLRNVIDNFFDNVMVMADDEAVKHNR 669 >gi|78224137|ref|YP_385884.1| glycyl-tRNA synthetase subunit beta [Geobacter metallireducens GS-15] gi|123729181|sp|Q39RG5|SYGB_GEOMG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|78195392|gb|ABB33159.1| glycyl-tRNA synthetase beta chain [Geobacter metallireducens GS-15] Length = 686 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 219/731 (29%), Positives = 349/731 (47%), Gaps = 75/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LEI +EEIPA KA D+ +L L+ + + ++R TP RL L +KGL Sbjct: 1 MKELFLEIGTEEIPAGFIPKAMADMEALLAKELENARISFDDIRTLGTPRRLALTVKGLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ +GP G +A +GF R G+ S + + KG+ AV Sbjct: 61 TVQPDAEITAMGPARNVAFDAEGKPTRAAEGFARGQGVDVASLTLVATE--KGEYVAAVR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ R + ++L I+P + +P+ KSMRW + RP+ I+ + Sbjct: 119 KESGRPVPELLAEILPRLVANIPFRKSMRWGALD-----VRFARPIHWIVALF-----DG 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ I G I+ GHRF A P V+ HY+ + E V+ DPE R+ I + H Sbjct: 169 VVVPFTFGNIESGTISRGHRFMANQPFPVRDFAHYLEECERHFVIPDPERRQEIIRREIH 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R+A A G L+ D+ LLEE+ L E+ G+F ++L +P E++ +++++Q+ F Sbjct: 229 RVAKAAGGHLLPDEGLLEEVSFLCEYPSAVHGTFSAEFLKVPREVLITSMRSHQRYFSIV 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI ++N D +V+GN RV+ ARL DA F++ DQ Sbjct: 289 DDAGKLMPGFITINNTLTEDP-TVVVKGNERVLRARLSDARFFFEEDQK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VD 412 L+ R+ L +VV+ K+GT E++ R R L + +A L++ V + V Sbjct: 337 ---------VKLETRVESLK--NVVYQQKLGTSFEKMERFRALAEGLADLLNPAVKVKVS 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 +A L KADL + +V EFPE+QG +G+EYA+++ E+ AI EH P +P + Sbjct: 386 QAAFLCKADLVSGMVGEFPEVQGIMGREYALIEGEDAEVAAAIAEHYLPTQAGGELPASD 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I VS+ADKLDT+ + + P+GS DPYALRR+ LGII IIL+ + L + + D+ Sbjct: 446 IGAFVSMADKLDTICGCFGVGLIPTGSADPYALRRSALGIINIILDKGYRLSLEEQV-DK 504 Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT------------------IVDL- 573 L L KL D++ D++E R NL+ +VD Sbjct: 505 ALGLL---AAKLTRPAVDVKADVLE-FFRGRFVNLMADRHASDAVDAAVAAGCADLVDAA 560 Query: 574 --IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 I L+EF S E ++ KR+ I+ + + AE L + Sbjct: 561 ARIAALSEFRSHPDFEPLAVAFKRVGNIV------KEGVDAPVDTALFQDAAEGLLNDAV 614 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++E + Y + + ++ P++ FFD+V+V +D VR NRL+LL I + Sbjct: 615 QGVAVSVREKIATGAYLEALTEIAALRGPVDTFFDKVMVMAEDERVRTNRLALLTGIARM 674 Query: 692 ILIVINVQKIV 702 + + + KI Sbjct: 675 LGAIADFAKIA 685 >gi|194017648|ref|ZP_03056258.1| glycyl-tRNA synthetase, beta subunit [Bacillus pumilus ATCC 7061] gi|194010548|gb|EDW20120.1| glycyl-tRNA synthetase, beta subunit [Bacillus pumilus ATCC 7061] Length = 681 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 217/722 (30%), Positives = 369/722 (51%), Gaps = 69/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR ++ + L + +E+ + ++++ + +P RL + +KG++ Sbjct: 5 DVLLEIGLEEMPARFMPESTKQLGEKVKVWFEEQNISFEDVALFNSPRRLAVLVKGVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + EE GP G KA +GF R G T D K+ KG Y+ V + Sbjct: 65 QEDIKEEAKGPAKKIAQDAEGNWTKAAEGFARGQGAST-DDLYFKE--IKGVDYVHVQKF 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + ++D+L + +A + +PK+MRW + +IRP+K I+C+ E+ Sbjct: 122 QEGKQVKDLLPALGEIAAS-LSFPKNMRWGSKD-----LRYIRPIKWIVCLF-----GEE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLD---HYIRDLEEAMVLLDPECRRNAILND 231 I+ + + G T GHRF K ++D Y + L + V+ D + R+ +I Sbjct: 171 IVPAHIAGVKSGRETRGHRFLG----KAATIDLPASYEQTLRDQFVIADSDKRKQSITEQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + L+ G + D +LLEE+ LVE+ V GSF++++L LPEE++ T+K +Q+ F Sbjct: 227 LNALSLEKGWVIPVDPELLEEVNNLVEYPTVLSGSFEEEFLALPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + +G L FI V N S+ + +GN +V+ ARL DA F+K D+ + Sbjct: 287 VKNEQGELLPHFITVRNGN-SEALENVARGNEKVLRARLSDAAFFYKEDEKLV------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---V 408 ++ + +LD VVFH K+GT G+++ R+ + ++A + AD Sbjct: 339 -------------IEDNIKKLD--KVVFHEKLGTIGDKLKRVTDIATRLAAHVGADDETT 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA +SK DL T++V EFPELQG +G++YA E+ +I EH PR + Sbjct: 384 ERVARAASISKFDLVTQMVYEFPELQGIMGEKYAKALGEHEEVAKSINEHYMPRFAGDEA 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ I V++ADKLD++ +F++I+ P+GS+DPY LRR GI++I+L+ +I + Sbjct: 444 PSTLIGAIVAVADKLDSICSFFSIDVIPTGSQDPYGLRRQASGIVQILLDRHWNISFKEL 503 Query: 529 I--------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + + LI F RLK L IRHD+++A+L EN +V L E Sbjct: 504 LALAQVEAAHETALIEFLTHRLKYVLQAEHIRHDVVDAVLDVENIEPYAVVKKAAVLEE- 562 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S K E F +A+ + ++++I +K EI P+ E E++LY T ++E Sbjct: 563 --SVKQESFKETAEALGRVISISKKGE---DAEIQPELFENEHEQKLYEAYQQVETAVKE 617 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + +Y + L ++ PI +FD +V+ DD +++ NRL+ + + +I N+ Sbjct: 618 HVAAGQYSAALEALDTLKTPIVHYFDHTMVHADDEKLKRNRLAQMVKLAKVIQSFANMNN 677 Query: 701 IV 702 ++ Sbjct: 678 LI 679 >gi|51891713|ref|YP_074404.1| glycyl-tRNA synthetase beta chain [Symbiobacterium thermophilum IAM 14863] gi|51855402|dbj|BAD39560.1| glycyl-tRNA synthetase beta chain [Symbiobacterium thermophilum IAM 14863] Length = 700 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 225/716 (31%), Positives = 343/716 (47%), Gaps = 80/716 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + +LEI +EEIPAR A E L L E + Y+ + + TP RL LY++ L+ Sbjct: 6 NLILEIGTEEIPARFCAPALEQLKENAAKALAEARLDYELVDVFGTPRRLVLYVRNLALR 65 Query: 63 SPE-KIEERLGPRVGAGKKAIDG----------FLRSTGLQTISDCQIKKDPKKGDVYLA 111 + ++E + PR K A D F G+ + + +++ D K G+ A Sbjct: 66 QRDVEVEVKGPPR----KIAFDAEGNFTVPARKFAEGQGV-ALEELEVRPDEKGGEYLWA 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 R +E VL ++ + + WPK+MRW+ + RP+K IL +L Sbjct: 121 RKRIQGESVETVLPPLLAGLVTSIHWPKAMRWADRE-----LRYARPIKWILALL----- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 + + D+ I + T GHR P PI V D Y + V++D R+ I Sbjct: 171 GDWRVPFDVDGIETVSTTRGHRVLGPAEPIAVSDADDYFAKVAGGYVMVDQAVRKQVIWQ 230 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A+ VG + D+DLLEE+ LVE F GSFD +L +P E++ T+K NQ+ F Sbjct: 231 QVTAEAARVGGFVRRDEDLLEELTWLVEQPTAFAGSFDPAFLEVPAEVLVTTMKDNQRYF 290 Query: 291 VTRTREGV--LANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNL 344 EG L FI V N GG + GN +V+AARL DA FW D+ Sbjct: 291 PVYKAEGSEELLPYFIGVRN-----GGHEHLDIVRAGNEKVLAARLSDARFFWDEDRR-- 343 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-- 402 +PL+ ARL + VF K+GTQ ERV R+ L + IAQ Sbjct: 344 ------------------QPLESFNARLK--EAVFQEKLGTQFERVERLVSLSRPIAQAL 383 Query: 403 -LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 L RA L KADL T +V EFPE+QG +GK+Y + Q + + +AI EH P Sbjct: 384 GLSPEQEEQAARAAWLCKADLMTRMVFEFPEVQGYMGKQYLLHQGGDPAVAEAIYEHYLP 443 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG +++P I V+LADKLDTL +++I P+GS+DP+ALRRA G+++ ++EN + Sbjct: 444 RGAGDDLPRTGPGIVVALADKLDTLAGYFSIGLIPTGSQDPFALRRAAQGVVQTLVENGL 503 Query: 522 DIPLSQFIE----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + L+ + +L+ FF R+K+ + R+IR+D+I+A+L Sbjct: 504 RVDLAALVSRAIEQYRLPGEAAVKTHSDLMEFFRARVKVLMEQREIRYDVIDAVLAAGFR 563 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 ++ V+ + L + + + KR+ LA + + +S EI P+ AE+ Sbjct: 564 DVTDAVNRAEALAAVMAEPEFAAVTGAFKRVAN-LAGKANEAGAVSAEIDPELFTEPAER 622 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 LY D ++ + + Y L + P++ F D V VNV+D +VR NR Sbjct: 623 DLYGAFVDLRPEMKRAYEAGDYRTFYHLATRLKAPVDAFLDTVRVNVEDEKVRANR 678 >gi|261365485|ref|ZP_05978368.1| glycyl-tRNA synthetase, beta subunit [Neisseria mucosa ATCC 25996] gi|288566017|gb|EFC87577.1| glycyl-tRNA synthetase, beta subunit [Neisseria mucosa ATCC 25996] Length = 687 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 216/660 (32%), Positives = 339/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQIKNVKAVQADQKIVKKGPAVANAMKDGVPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 L +L +D I+D+ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HG-LIVLHGDD----IVDVSVLGLQSGNQTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALSEQAGRLKATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +R L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERTARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTTFDSFPKGLLNEKTLSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVADGNFQTALSELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLL 669 >gi|116749873|ref|YP_846560.1| glycyl-tRNA synthetase subunit beta [Syntrophobacter fumaroxidans MPOB] gi|116698937|gb|ABK18125.1| Glycine--tRNA ligase [Syntrophobacter fumaroxidans MPOB] Length = 694 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 230/723 (31%), Positives = 354/723 (48%), Gaps = 69/723 (9%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 +EI EEIPA A E +S + L E V TP RL L + +S Sbjct: 11 IEIGCEEIPAGYIAPALESMSRQMTRFLDENRVGRGEPHVTGTPRRLILSIPDVSTQQEA 70 Query: 66 KIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PK 117 E +GP G +A +GF R G+ TI D +IK+ P+ G+ YL +LR+ Sbjct: 71 CTTEIIGPPKQAAFDAGGKPTRAAEGFARGQGV-TIEDIRIKETPR-GE-YLFILREESG 127 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L+ ++P I +P+PKSMRW+ + ++ RP++ I+ +L E +D Sbjct: 128 SATRALLEKMLPDFIAHIPFPKSMRWAGL-----SVTFARPVRWIVALLGRE-----TLD 177 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L+ +I G+ GHRF +P + V D + R+L + V+ + R+ I A Sbjct: 178 LEYGDIRSGDKAMGHRFMSPEWLTVTDYDSHTRNLAKHYVIAEIAERKKLIAEKIREAAV 237 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 VG ++ED++LL+E+ +VE+ + +G F++KYL LP EL+ IK +Q+ F +G Sbjct: 238 GVGGGILEDEELLDEVTQIVEYPEPIVGEFEEKYLELPPELLITVIKKHQRYFAVTDTDG 297 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L F+ V+N D + GN RVV ARLEDA +++ DQ Sbjct: 298 KLLRYFVTVANTIPRDP-RLVAAGNGRVVRARLEDARFYYREDQKVR------------- 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVDRAIV 416 LD R+ +L VVFH+K+GT E+ R L + + + I D + + RA Sbjct: 344 -------LDDRVEQLK--GVVFHSKMGTSWEKKERFTALARWLGERIAPDRLETLLRAAH 394 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L KADL T +V EFPELQG +G+ YA LQ E + AI EH P ++P Sbjct: 395 LCKADLVTGMVGEFPELQGVMGRAYARLQGEPEAVAAAIFEHYLPNRAGGSIPEGMEGAL 454 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 +S+ADK+DT+ + + PSG+ DP+ALRR TLGI+RIILE + L + I+ Sbjct: 455 LSVADKMDTIAACFGVGLNPSGTADPFALRRQTLGILRIILEKSFRLSLCELIDKALPLL 514 Query: 532 ------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ FF RL YL ++ DL+EA L D+ + V K L Sbjct: 515 ADKLTVPPETARKDVLEFFRGRLLHYLVSQEGYAADLVEATLAVGIDDPVDAVARTKALV 574 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ I+ E +L + P+ L E+ L+ +SD + Sbjct: 575 AFKARPDFESLAAAFKRVANIIKEPE------TLPVEPELLQTAPEQALFGALSDTEGIV 628 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 E++ Y + + + ++ FFD VLV D VR NRL+LL I+++ V + Sbjct: 629 NEALARSDYDAALEAMSRLRGFVDAFFDSVLVMDKDERVRRNRLALLTRIRDLFSGVADF 688 Query: 699 QKI 701 +KI Sbjct: 689 RKI 691 >gi|34581093|ref|ZP_00142573.1| glycyl-tRNA synthetase beta chain [Rickettsia sibirica 246] gi|28262478|gb|EAA25982.1| glycyl-tRNA synthetase beta chain [Rickettsia sibirica 246] Length = 664 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 231/691 (33%), Positives = 352/691 (50%), Gaps = 67/691 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + EE I+ ++ + P R+ L+ L + K EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIF-EENEIFAKVQVFAGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 72 PSIEAPEAAINGFCKA---HNVSKLELPTKLISNQLYYFFVKKTEEREIKEILPEIIIEA 128 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E I+ + + NITYG Sbjct: 129 INKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYG 178 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR ++V + Y L E V+L+ R I LA++ L + ED L+E Sbjct: 179 HRLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELANSHELIIKEDNRLVE 238 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + Sbjct: 239 EVVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRF 298 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 ++ ++QGN +V++ARL DAL+F K+ D++K L+ R+ + Sbjct: 299 TN-AELVIQGNEKVLSARLSDALYFCKQ--------------------DIAKTLESRLGQ 337 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L+ V FHAK+G E++ RI + IA + D+ R L K+DL +E+V EFP Sbjct: 338 LEA--VTFHAKLGNLREKIERITDICNYIAP-NNKDLITAAR---LCKSDLVSEMVGEFP 391 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + N AI +H KP+G +N+P+ ++ KLD+L+ Sbjct: 392 DLQGIMGYYYAKHEGLNAEIATAIRDHYKPQGLSDNLPSGNAALLALAD-KLDSLVGLMI 450 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------EDQNLIL-FF 538 E P+GS DPYALRR LGIIRIILENK+++ I E++NLI+ FF Sbjct: 451 AGETPTGSGDPYALRRQALGIIRIILENKLELNFDDLINFSINLYKDSSDENKNLIISFF 510 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R K Y +D DI LI A+L + NL+ + L EF G++ L + KR Sbjct: 511 EERAKFYFKNDYDIV--LINAVL---DLNLVDTNFKLDALKEFLIEDAGKQLLNAYKRAS 565 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 566 NIIG-----DQKITGLVDASLFSTQPEKELFEVIQKISPRIIDSIADKDYKKALNLLSSL 620 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 PI FFD VLVN D ++ NRLSLLQ I Sbjct: 621 LTPITSFFDNVLVNDSDPKIAQNRLSLLQNI 651 >gi|296113853|ref|YP_003627791.1| glycyl-tRNA synthetase beta subunit [Moraxella catarrhalis RH4] gi|295921547|gb|ADG61898.1| glycyl-tRNA synthetase beta subunit [Moraxella catarrhalis RH4] Length = 692 Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 222/725 (30%), Positives = 356/725 (49%), Gaps = 65/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I +IRP+ I +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFIRPVHWI--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 173 DV---VIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLNEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQK------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 + +LS L R +F K+GT E+ RI L IA I A+ Sbjct: 342 ------QPLFELSHHLKTR---------IFQDKLGTLWEKSERIANLAVHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G Y L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYTRLNDEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGIALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLHVSLSHLV 506 Query: 530 E-------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ L + F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA K + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILA----KAGTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINV 698 V ++ Sbjct: 683 SVADI 687 >gi|328952742|ref|YP_004370076.1| Glycyl-tRNA synthetase beta subunit [Desulfobacca acetoxidans DSM 11109] gi|328453066|gb|AEB08895.1| Glycyl-tRNA synthetase beta subunit [Desulfobacca acetoxidans DSM 11109] Length = 690 Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 219/728 (30%), Positives = 362/728 (49%), Gaps = 70/728 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EEIPAR E++ + L L++E + + ++ TP RL L + ++ Sbjct: 4 DLLIEIGTEEIPARFIPPVLEEMKVSLAKRLEQERLAVEVVKTMGTPRRLTLIAQKVATQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 E E +GP G +A GF R+ G++ ++ D +G YLAV + Sbjct: 64 QAESTAEIIGPPQAVAFGADGQPTQAAFGFARAQGVEVKDLIVVQTD--RGP-YLAVKKH 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R + L I+P I + +PKSMRW + ++ RPL I+ + E+ Sbjct: 121 AAGRPAHERLSEILPEWILGLSFPKSMRWGSL-----TVTFARPLHWIVALF-----GEE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDH--YIRDLEEAMVLLDPECRRNAILNDA 232 +I + +I G +TYGHRF AP I + + D YI L +A VL+ PE RR +L Sbjct: 171 VIPFAVGDITSGRLTYGHRFQAPQAITLATADAEAYINSLRQAQVLVAPEERRAKLLEQL 230 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A++V ++V + +LL+E LVE+ + +G+F++K+L LP++++ +++ +Q+ F Sbjct: 231 QQAAASVQGQIVPNPELLQENTFLVEYPNLTLGNFEEKFLALPDDVLITSMREHQRYFSL 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L FI V+N A + + QG+ RV+ ARL DA+ F++ D+ Sbjct: 291 RDGSGKLMPHFIAVNNTLARNPDV-VRQGHERVLRARLSDAMFFFQEDR----------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-LIDADVALV 411 K NLD D A + VV+H+ +GT ++++R R L + +A+ L+ + V Sbjct: 339 ---KVNLD-----DWVEA---LRGVVYHSLLGTSYDKMARFRSLARYLAERLLPDSITPV 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L KADL + +V EFP LQG +G+EYA+L E DAI H PR + +P N Sbjct: 388 HRAATLCKADLVSGMVGEFPSLQGIMGREYALLAGEAPEVADAIWTHYLPRHAGDQLPDN 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 + V +AD+LD++ + + P+G+ DPY LRR L II I+ E K + LS + Sbjct: 448 PVGAIVGMADRLDSICGCFGVGLIPTGAADPYGLRRQALAIISILGEKKFYLDLSSAVSY 507 Query: 531 -------------DQN---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 DQ +I FF RL L + +++EA+L +++ ++ + Sbjct: 508 SLSLLQDKLTLPVDQTHAEIIEFFRTRLHHLLTGENFSVEVVEAVLTTSFTDIVEAMEKV 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L E ++ KR+ I + + I P+ AE+ L+ Sbjct: 568 RALEEVRRGLDFPSLAVAFKRVINI------SRQAPAAVIKPELFDNTAEQELFQATIAM 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++ + Y ++ L ++ P++ FFD+VLV DD +R NRL+LL I L Sbjct: 622 EEVVARALPARDYAEVFKALAALKTPVDRFFDEVLVMTDDLNIRANRLALLVRISQTFLK 681 Query: 695 VINVQKIV 702 V + +I Sbjct: 682 VADFSRIA 689 >gi|114319177|ref|YP_740860.1| glycine--tRNA ligase [Alkalilimnicola ehrlichii MLHE-1] gi|114225571|gb|ABI55370.1| glycyl-tRNA synthetase beta chain [Alkalilimnicola ehrlichii MLHE-1] Length = 693 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 221/722 (30%), Positives = 355/722 (49%), Gaps = 63/722 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+P + ++ L++ + + + Y TP RL L ++ L Sbjct: 8 LLIEIGTEELPPVALPRLEAAFRDGVVQGLEQAELGHGPVHSYATPRRLALQVEALQARQ 67 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-K 115 +K ER GP + G KA +GF RS G T+ + + PK +LA + Sbjct: 68 EDKAIERRGPALNVAFDDHGRPTKAAEGFARSCG-ATVEQLERLETPK--GTWLAWRGVQ 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R ++L IV ++ ++P PK MRW + + +++RP+ I+ +L A+ + Sbjct: 125 PGRAATELLPDIVNQSLSRLPIPKRMRWGSGQA-----TFVRPVHWIVFLLGAD-----V 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 + L ++ G T GHRFHAP PI++ S D Y L E V E RR I R Sbjct: 175 VPATLMDVTSGRTTRGHRFHAPEPIELASADDYAERLRGEGRVEASFEARRERIRRGVLR 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+ LL+E+ LVEW +GSFD +L +PEE + +++ +QK F R Sbjct: 235 LAEQEQGVAIMDEGLLDEVTALVEWPVPLVGSFDPGFLEVPEEALISSMQGHQKYFPVRG 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI V+NI++ D + GN RV+ RL DA FW++D+ Sbjct: 295 QDGQLLPLFITVANIESRDPDQ-VRSGNERVIRPRLADADFFWQQDRK------------ 341 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R+A D+ V+F ++GT ++ R+ L +++A +D D A V RA Sbjct: 342 --------RPLIDRLA--DLKGVIFQKQLGTLYDKTQRVAHLAEQLAVEMDHDPAPVARA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L++ DL TE+V EFPELQG +G+ YA+ E + DAI EH +PR E +P Sbjct: 392 AWLARCDLGTEMVGEFPELQGIMGRYYALHDGEPKAVADAILEHYRPRYAGEAIPATPAG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +++A++ DTL +AI P+G KDP+ALRRA LG++R ++E ++ + L + + Sbjct: 452 RLLAIAERADTLAGIFAIGLAPTGDKDPFALRRAALGLMRTLIEGELPLDLEGLLGRAAV 511 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +L F +RL+ Y ++ I +L EA+L L + Sbjct: 512 LLPEGIAGRSIAEEVYDFCLERLRGYYQEQGIGAELFEAVLAVRPRCPLDFHRRLLACRR 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL K + ++ L AE+ L + +Q Sbjct: 572 FAGLPEAEALAAANKRIGNIL---RKAGETVPDTVASAQLKEPAEQALARSLEATREQLQ 628 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L + EP++ FFD +LV +D VR NRL+LL+ I+ + L + +V Sbjct: 629 PRLAEGDYAGALEGLARLREPVDTFFDDILVMAEDPGVRVNRLALLKAIQALFLEIADVS 688 Query: 700 KI 701 ++ Sbjct: 689 RL 690 >gi|319409761|emb|CBY90067.1| glycyl-tRNA synthetase beta chain (glycine-tRNA ligase beta chain; GlyRS) [Neisseria meningitidis WUE 2594] Length = 687 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 214/662 (32%), Positives = 348/662 (52%), Gaps = 64/662 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + +L+ ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKLLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSGNKTLGHRFLSNGEITIENADSYAEQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKTAIQTALEGQACRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F R G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDRNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L ++VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--VNVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEITEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P KI+ V+LADKL+TL+ W I P+G KDPYALRR+ LGI+R++++ Sbjct: 435 YQPRFAGDNLPEGKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRSALGILRMLMQ 494 Query: 519 NKIDIPLSQFIED------QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPE 563 +D+ ++ I+ Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDV--NELIQTAFNSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQ 551 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + + KR+ +L +K + E+ ++ L + Sbjct: 552 PRRLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDE 607 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+ Sbjct: 608 EKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLN 667 Query: 684 LL 685 LL Sbjct: 668 LL 669 >gi|325204882|gb|ADZ00336.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240355] Length = 687 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 214/660 (32%), Positives = 343/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 INDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSGNQTLGHRFLSGGEIAIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI + A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALNEQAGRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F R G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDRNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEQTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V DD V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMADDAAVKQNRLNLL 669 >gi|262373565|ref|ZP_06066843.1| glycyl-tRNA synthetase beta subunit [Acinetobacter junii SH205] gi|262311318|gb|EEY92404.1| glycyl-tRNA synthetase beta subunit [Acinetobacter junii SH205] Length = 688 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 209/720 (29%), Positives = 365/720 (50%), Gaps = 68/720 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L LK+ G+ + + Y P RL L + + Sbjct: 6 LFELGCEELPPKSLKTLRDALKAETEKGLKDAGLNFAAIEAYAAPRRLALKIVDIDAAQA 65 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K + L+ Sbjct: 66 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEK-----VCFLKD 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D + Sbjct: 121 VKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---Q 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I + + Sbjct: 171 VVEATIQDHKAGNVTYGHRFHAPEAVVLAHANDYLATLEQAYVVANFEKRQATIQDQVKK 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 231 LADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLIN 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI +SNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 291 AEGKLQPYFITISNIESKDP-IQIIEGNEKVVRPRLSDAEFFFLQDQK------------ 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L ++VF A++GT ++ RI L ++ + A++A ++A Sbjct: 338 --------QPLASRKEKL--ANMVFQAQLGTLWDKSERIAKLAVALSPITGANIADAEKA 387 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL +E+V EFPELQG G YA L+ EN +A+ E P+ + +P Sbjct: 388 ALLAKCDLTSELVGEFPELQGIAGTYYARLEGENHEVAEALGEQYLPKFAGDVLPQTNTG 447 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 448 TTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNFALQ 507 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F R + D+ + D+I+A+ + L + +N Sbjct: 508 GYGDVVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVIQAVQALAPKSPLDFDKRVTAVN 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA E + +E + L+ AEK LYA + + Sbjct: 568 HFRTLPEAAALAAANKRVANILAKEATPEGAV-VEAN---LVETAEKALYAELQALTPVV 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + + Y + L ++ PI+ FF+ V+V DD E++ NRL LL ++++ + +V Sbjct: 624 EPLLAARNYTEALSKLAALRAPIDAFFEGVMVMADDAELKANRLRLLAQLRDLFTAIADV 683 >gi|51474017|ref|YP_067774.1| glycyl-tRNA synthetase subunit beta [Rickettsia typhi str. Wilmington] gi|81826275|sp|Q68VR4|SYGB_RICTY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|51460329|gb|AAU04292.1| Glycyl translase [Rickettsia typhi str. Wilmington] Length = 664 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 234/688 (34%), Positives = 350/688 (50%), Gaps = 65/688 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + KE + Q ++ + P R+ L+ L K EE G Sbjct: 13 IPAFMQKNAEEAYLNIFTKIFKENEIFAQ-VQVFVGPRRITLHATNLPKVILPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF + + D K KK Y V + R ++++L I+ AI Sbjct: 72 PSIEAPEIAINGFCKVHNVNKF-DLSTKLINKKL-YYFFVKKTQAREMKEILPKIIIDAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ L + NITYGH Sbjct: 130 NKYSWIKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLQFGHLSANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R +++ ++Y L E V+L+ R I LA+A L + +D L+EE Sbjct: 180 RLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDARLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LPEE+I ++ +QK F + G A F+ V N + Sbjct: 240 VTGLNEFPVVLLGKIPQKFLELPEEVIISVMRKHQKYFCLFDKTGNFAPYFLFVINGRFV 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + I+QGN +V++ARL DAL+F+K D++K L+ R ++L Sbjct: 300 N-IELILQGNEKVLSARLADALYFYKH--------------------DIAKTLESRFSKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V+FHAK+G+ E+V RI + + IA + D+ + R L K+DL +++V EFP+ Sbjct: 339 E--SVIFHAKLGSLKEKVDRITDICRYIAP-DNIDLIMAAR---LCKSDLVSDMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NVP+ ++ ++LADKLD+L+ + Sbjct: 393 LQGIMGYYYAKHEGLNEEVAKAIRDHYKPQGLNDNVPSGNATL-LALADKLDSLVGLIIV 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------------QNLILFFH 539 E P+GS DPYALRR LGIIRII+ENK++I I ++I FF Sbjct: 452 GETPNGSGDPYALRRQALGIIRIIIENKLEINFINLINFAVSLYKVPTNTHLDSVISFFE 511 Query: 540 DRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 +R K Y +D DI LI A+L + NL+ + L EF G++ L + KR+ Sbjct: 512 ERAKFYFKNDYDIA--LINAVL---DLNLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSN 566 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 I+ N++I+ + + EK L+ VI I + +K Y + +LL S+ Sbjct: 567 IIG-----NQKITGLVDVSLFSTQYEKELFEVIQIISQQIIAIIANKDYKKALNLLSSLL 621 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 +PI FFD VLVN D ++ NRLSLL Sbjct: 622 KPITSFFDNVLVNDSDPKIAQNRLSLLH 649 >gi|326568416|gb|EGE18496.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC7] Length = 692 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 220/725 (30%), Positives = 357/725 (49%), Gaps = 65/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I +IRP+ + +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFIRPVHWV--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +I+ ++ GN + GHR+H+P + D+Y L+ V+ D + R+ IL Sbjct: 173 DV---VIEATIQGHKTGNQSRGHRYHSPDFFAIDHADYYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQK------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 342 -------------QPLFELSHHLKT--QIFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDQLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGIALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 E-------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ L + F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA K + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILA----KAGTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINV 698 V ++ Sbjct: 683 SVADI 687 >gi|163751701|ref|ZP_02158920.1| glycyl-tRNA synthetase beta subunit [Shewanella benthica KT99] gi|161328440|gb|EDP99596.1| glycyl-tRNA synthetase beta subunit [Shewanella benthica KT99] Length = 689 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 219/719 (30%), Positives = 353/719 (49%), Gaps = 61/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE LK+ + +++ + TP RL + + L Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLSNFTAELKKSELSFESAVWHATPRRLAICVNQLVLA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEEAGRLKTD--KGEWLLHQAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P+PK MRW + + +IRP+ ++ +L +E I Sbjct: 123 VGVETKSLISAMAQRALDKLPFPKPMRWGSNKT-----QFIRPVHTVTMLLGSE-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + +L I + GHRF ++ D+Y+ L+E VL D E R+ I DA Sbjct: 173 VAGELLGIKSDRVIRGHRFMGQASFELDHADNYLSALKEKGKVLADYEARKAIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + +LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKLGGIADLEDELLEEVCSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI + D I+ GN +VV RL DA F++ D+ Sbjct: 293 QTGQLLANFIFVTNIVSKDP-QVIISGNEKVVRPRLADAEFFFENDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+ L+ VVF ++GT +RV RI + IA IDA+ RA Sbjct: 340 --------QTLEDRLPSLE--SVVFQKQLGTIKQRVERISAMAGFIASSIDANAEEASRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A++E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVALALQEQYKPKFSGDTVPTAAIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 + V+LA+KLDTL+ + I P G+ DP+ALRRA +GI+RI +EN + + L +Q Sbjct: 450 VCVALAEKLDTLVGIFGIGLAPKGAADPFALRRAAIGILRICVENNLPLDLVDLIAKAQA 509 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + FF R + + D+ + D+I A+L + IK + Sbjct: 510 LHGSNLSNDTTAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARHPTSPADFDSRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K +I I L AEK L +++ + Sbjct: 570 FRTLEQALALAAANKRVSNILA---KVKGDIPASIDASLLTETAEKALAQKLNELQPKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + LL + E +++FF++V+V VDD +++NRL+LL ++ L V ++ Sbjct: 627 PLFASANYQEALALLADLRESVDVFFEEVMVMVDDEALKNNRLALLSSLREQFLHVADI 685 >gi|46446327|ref|YP_007692.1| glycyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|46399968|emb|CAF23417.1| probable glycyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] Length = 1017 Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 214/739 (28%), Positives = 364/739 (49%), Gaps = 85/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF++EI S+E+PA ++L + LL++EG+ ++ + Y TP R+ +Y+ LS Sbjct: 318 DFVIEIGSQELPASFVSIGGQNLERAIRALLEKEGISFERIVVYGTPRRIAVYIYQLSKG 377 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQT----------ISDCQIKKDPKK 105 P + E+ GP V G K A +GF RS G+ T IS+ +I+ P K Sbjct: 378 KPSQTIEKKGPPVEQAYQVDGTIKVAGEGFFRSLGMTTPTLAAIQNHEISEIEIR--PIK 435 Query: 106 GDVYL-AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 G YL +++ R +L +P+ I + +PK MRW+ ++ RPL+ +L Sbjct: 436 GINYLFGSVKQEGRATTSILAEKLPLLIGSLDFPKKMRWADLE-----ITYARPLEWVLA 490 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECR 224 + + II + + ITYGHR +P I + +Y++ L + V+ DP R Sbjct: 491 LF-----GKDIIPFAIGNLFSDRITYGHRQLSPQAIHLDHAKNYLKSLHQHSVMADPNER 545 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 +IL L ++++E ++ +++ LVEW + + +F +++L +P+E++ + Sbjct: 546 EESILEQLSNLEKQEQIQIIEKNRVIPQVLNLVEWPYLTISTFREEFLKVPKEVLISEMV 605 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 +QK F G L N F++ +NI ++ I QGN +V++ARL D + ++ D Sbjct: 606 EHQKYFPVTDSNGTLKNLFVITANIIPTE---QIKQGNQKVLSARLSDGVFLYEED---- 658 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 LK FN L K V F ++GT ++V RI K + L+ Sbjct: 659 -----LKVPLASFNEKLKK-------------VTFQKELGTVYQKVERIIQHAKVLQILL 700 Query: 405 DADVA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 LV+RA +LSKADL + +V EFPELQG IG+ YA+ E AI+EH PRG Sbjct: 701 GISTPILVERAALLSKADLASNMVYEFPELQGTIGRYYALANREEAEIAQAIDEHWMPRG 760 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +P + +SLADKLD LI ++I KP+ S DPYALRR LG+I+++++ + + Sbjct: 761 ENAPLPETETGTIISLADKLDNLIGCFSIGLKPTSSSDPYALRRQVLGVIKMLIKGQYSL 820 Query: 524 PLSQFIE-----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 L + +E Q+++ F +R+K D D IEA L + Sbjct: 821 HLEECLEKCISHFPTHIVKDKKQMTQDILSFITNRIKTVFQDYGFHKDEIEASLANGCQD 880 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI----SLEISPQYLLLE 622 + +K L+ F SA + + + ++ ++ + IS + L Sbjct: 881 IYDTFCRVKALHNFRQG--------SASQFHSLYEVYKRAKGQLNGYQTSNISAELLKEP 932 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AE+ LY+++ E++ K Y+Q L+ ++ + + F+QV + D+ ++RDNRL Sbjct: 933 AEQNLYSLLDRQQKAFAEAIKKKDYNQAYALIATMQPALAVLFEQVKILADEPQIRDNRL 992 Query: 683 SLLQYIKNIILIVINVQKI 701 +LL+ + N +++ KI Sbjct: 993 ALLKQVFNFFEEMLDFSKI 1011 >gi|270291314|ref|ZP_06197536.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici 7_4] gi|270280160|gb|EFA25996.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici 7_4] Length = 690 Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 214/730 (29%), Positives = 359/730 (49%), Gaps = 77/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLEI EEIPA + + + L+ + LKE + Y ++ Q+ TP RL + + GL Sbjct: 5 YLLEIGLEEIPAHVVTPSIQQLAQKVAKFLKENRLSYDSIEQFSTPRRLAIRINGLGDRQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E+ GP G KA GF + GL T+ D K VY+ L + Sbjct: 65 PDIEEDAKGPARKIAQDADGNWTKAAIGFTKGQGL-TVDDITFKTIKGTEYVYVHKLIQG 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K +++L I V ++ + +P M+W+ F ++RP++ ++ IL ++++ Sbjct: 124 K-TTQEILPGIKDV-VESLNFPTMMKWANYD-----FKFVRPIRWLVSIL-----DDEVL 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + +I G + GHRF + + + Y L+ V++D E R+ I +A Sbjct: 172 PFQILDIKAGRQSQGHRFLG-KAVDLANPSEYEEKLQAEFVIVDAEKRKALIREQIQAIA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 E+ + DLLEE+ LVEW F G FD KYL +PEE++ +++ +Q+ F R ++ Sbjct: 231 QEENWEVTPNADLLEEVNNLVEWPTAFSGKFDPKYLAIPEEVLITSMRDHQRFFFVRNQD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V N + +++GN +V+ ARLEDA F+ DQ N Sbjct: 291 GKLLPNFISVRNGN-KEHLENVIRGNEKVLTARLEDAAFFYDEDQKN------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---R 413 +D + RL V FH KIGT E+++R+ + + IA+++ D + R Sbjct: 337 -------SIDYYVDRLK--KVSFHDKIGTMAEKMTRVGSIAQVIAKMLGLDAETAEDLQR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P + + Sbjct: 388 AAAIYKFDLVTGMVGEFPELQGVMGEKYALLKGEKSAVAQAIREHYMPNSAEGELPESTV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 ++LADK D + +F++ PSGS DPYALRR GI+RI+ + + L++F E Sbjct: 448 GAVLALADKFDNIFSFFSAGMIPSGSNDPYALRRHAYGIVRILAQRDWSLDLNKFEEAVK 507 Query: 531 --------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 D+N + FF+DR+K YL + + +D+ +A+L N+ TI+ Sbjct: 508 QALADDQTSFGVDVDKNFAEVVEFFNDRIKQYLDHQSVSYDIEDAVLAGSQHNVTTII-- 565 Query: 574 IKHLNEFFSSAK-GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 E ++AK + F + + ++ I K L + PQ E E +L+ +I+ Sbjct: 566 --AAAEVLTNAKAADSFKDEIEALTRVQRIATKNTTAGDLAVDPQLFNNETEGKLFDLIT 623 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 E+M+ L S+ I +FD +V D +++ NRL+++ + N++ Sbjct: 624 KI-----EAMNDSDMAAFFKELTSLTPAITEYFDATMVMDKDAKIKANRLNMMSRLANLV 678 Query: 693 LIVINVQKIV 702 L V ++ K++ Sbjct: 679 LRVGDLTKVM 688 >gi|189424088|ref|YP_001951265.1| glycyl-tRNA synthetase subunit beta [Geobacter lovleyi SZ] gi|238692124|sp|B3E621|SYGB_GEOLS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189420347|gb|ACD94745.1| glycyl-tRNA synthetase, beta subunit [Geobacter lovleyi SZ] Length = 687 Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 225/716 (31%), Positives = 349/716 (48%), Gaps = 69/716 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EEIPA KA L ++ L+ + + + TP RL L++KGL Sbjct: 4 ELLLEIGAEEIPAGFVPKALASLEEMIRKELETARLCFDAIVTMGTPRRLTLHIKGLPVI 63 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ +GP A GK KA +GF R G+ + I D KG+ YLAV R+ Sbjct: 64 QPDAELTAMGPSKKAAFDADGKPTKAAEGFARGQGVDVSALQVISTD--KGE-YLAVTRQ 120 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L I+P + +P+ KSMRW+ + RP+ I+ + Sbjct: 121 ETGRPTHELLAEILPRLVAGIPFKKSMRWADLD-----IRFARPVHWIVALF-----DGI 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I GNI+ GHRF A V+ HY+ + E V++D E R+ I + HR Sbjct: 171 VVPFSFGPIQSGNISRGHRFMANSTFPVRDFAHYLDECERHFVIVDQERRKETIRKETHR 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A G L+ D+ LLEE+ LVE+ +GS ++L +P+E++ +++++Q+ F Sbjct: 231 VAKTTGGHLLPDESLLEEVTYLVEYPSAIIGSIPAEFLVVPKEVLITSMRSHQRYFSVVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI + N A D A +V+GN RV+ ARL DA F+ D++ L S ES Sbjct: 291 ENGKLLPYFITIPNTLAEDP-AVVVRGNERVLRARLSDARFFF--DEDRKLRLESRVES- 346 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA-QLIDADVALVDR 413 + VV+ K+GT E++ R R L +++A QL A R Sbjct: 347 -------------------LKSVVYQQKLGTSYEKMERFRALAEQLAEQLNPAAKQQAAR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L KADL + +V EFPE+QG +G+EYA+ E + +AI EH P ++P + I Sbjct: 388 TAFLCKADLVSGMVGEFPEVQGIMGREYALHDGEETAVANAIAEHYLPTQAGGDLPASDI 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 VSLADKLDTL + + P+G+ DPYALRRAT+G+I IIL+ + LS I D++ Sbjct: 448 GAFVSLADKLDTLCGCFGVGLIPTGAADPYALRRATIGMISIILDKGYSLSLSGLI-DKS 506 Query: 534 LILFF-----------HDRLKLY------LHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 L L HD L+ + L D++EA + D+L + I+ Sbjct: 507 LELLAAKLTRPRDEVRHDVLEFFRGRFVNLQGNAYPADVVEAAMAAGFDDLADCAERIRA 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L+ F + ++ KR+ I+ I ++P EAE LY V+ + Sbjct: 567 LDTFRQRDDFQPLTVAFKRVCNII------KEGIDAPVAPALFQDEAEHTLYRVLQETKL 620 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + ++Y + + + ++ FFD V+V +D VR+NRL+LL I + Sbjct: 621 SASDKIQQQQYLEALTDIAGLKWAVDAFFDAVMVMAEDSAVRNNRLALLTTINRLF 676 >gi|312869157|ref|ZP_07729331.1| glycine--tRNA ligase, beta subunit [Lactobacillus oris PB013-T2-3] gi|311095403|gb|EFQ53673.1| glycine--tRNA ligase, beta subunit [Lactobacillus oris PB013-T2-3] Length = 691 Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 218/731 (29%), Positives = 373/731 (51%), Gaps = 78/731 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + L+EE + + ++++ TP RL L ++GL+ Sbjct: 5 YLLEVGVEEMPAHVVTPSIKQLHQRVADYLQEERISFDEIQEFATPRRLALLIRGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G T+ D + ++ KG+ Y+ V + Sbjct: 65 PDVDETVKGPAKKIAQDSDGNWTKAAIGFTRGQG-ATVDDIEFRE--VKGEEYVFVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +VL T +P I + +P M+W + +IRP++ ++ +L +++ Sbjct: 122 AGKPVAEVL-TGLPNVITAMNFPTLMKWGYNN-----LQFIRPIRWLVSLL-----NDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ G T GHRF H I++ + + Y +LE+ V++DP R+ I + + Sbjct: 171 VPFSILDVAAGRTTRGHRFLG-HDIELATAEDYEAELEKEFVIVDPLRRKKVISDQIDAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + +D DLLEE+ LVEW F GSFDKKYL LP+E++ ++K NQ+ F R Sbjct: 230 VEEHDWVIDKDPDLLEEVTNLVEWPTAFAGSFDKKYLVLPDEVLITSMKDNQRFFYLRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + I++GN RV+ RLEDA F++ DQ Sbjct: 290 QGKLLPNFIAVRN-GNKEYLENIIKGNERVLVPRLEDAKFFYEEDQ-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV----LGKKIAQLIDADVALV 411 +DQ + RL V FH KI + +++ R+ V LGK++ L A++A + Sbjct: 335 ------KLTIDQYVDRLKK--VSFHDKISSMYDKMQRVAVIAQLLGKRL-NLSAAELADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T++V EF ELQG +G+ YA L E AI EH P ++P Sbjct: 386 DRAAHIYKFDLTTQMVGEFAELQGVMGEIYAKLFGEKDDVAAAIREHYMPISAEGDLPAT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN-------KIDIP 524 K+ +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + I Sbjct: 446 KLGAILAIADKLDSILSFFAVDMIPSGSNDPYALRRQAFGIVRIINDRGWHLSLLGIQPV 505 Query: 525 LSQFIEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L + D ++ + FF DRLK + R +RHD+I+A+ END++ T+ Sbjct: 506 LIKAFADSDVAIDFDLTKNAPAVRTFFLDRLKQFFSGRRLRHDIIDAVTDTENDDIETVF 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + ++E A F + + + ++L I +K +++++ ++ P +EK+LY + Sbjct: 566 EAAAAIDEHKEDA---DFKDAVEALTRVLRISKKGHQDLAAQVDPSLFENPSEKKLYTAV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + + ++ L I E +FD+ ++ + VR+NRL+ L I + Sbjct: 623 NEVAAGAANRTVAENFAELRQLAPVITE----YFDENMIMDKNEAVRNNRLAQLAIIARL 678 Query: 692 ILIVINVQKIV 702 ++ N+ ++ Sbjct: 679 ARVMGNLNDLI 689 >gi|291278668|ref|YP_003495503.1| glycyl-tRNA synthetase subunit beta [Deferribacter desulfuricans SSM1] gi|290753370|dbj|BAI79747.1| glycyl-tRNA synthetase, beta subunit [Deferribacter desulfuricans SSM1] Length = 682 Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 223/720 (30%), Positives = 358/720 (49%), Gaps = 76/720 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LEI +EEIPA + AA L L++ + Y ++ TP RLFLY++ +S Sbjct: 1 MSFYILEIGTEEIPASFINPAANFLKEHFKNELEKNRINYSSIESGGTPRRLFLYIENIS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE GP G K GF +S GL + +K D KG+ + Sbjct: 61 DRQADLEEEIKGPPANIAFDENGNLTKTALGFAKSKGLDVNTLRSVKTD--KGEYLVGTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++LK +V I+ P+PKSM+W + + RP+ L I Sbjct: 119 KVKGEDTVNILKNLVVQTIKNFPFPKSMKWGDKN-----LRFARPIHWFLSIYNG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K+++ +++ I GN T+GHRF A IK+ S D Y L+E V++D R+ I Sbjct: 169 KVLEFEIEGIKAGNYTFGHRFMANKQIKISSFDEYKAKLKENFVIVDFNERKEII----R 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + +G + D+DLL+ + LVE+ +G F + +L LP+E++ ++K +QK F R Sbjct: 225 SFLNNIGNVFI-DEDLLDTVANLVEYPHPILGEFPEHFLQLPKEVLITSMKNHQKYFY-R 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + N F+ +SN + D + I G RV+ ARL DA+ F++ D+ Sbjct: 283 EKDGKILNSFVGISNTKPKDD-SLIKSGYERVLKARLNDAMFFFENDK------------ 329 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV-D 412 PL++RM +L VV+ ++GT E++ R R + +A+ + + A D Sbjct: 330 --------KVPLEERMEQLK--KVVYQEQLGTSYEKMERFREIALFLAKKLAPNKATTTD 379 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL TE+V EFPELQG +G+EYA++Q E DAI EH PR + +P Sbjct: 380 RAAFLCKADLMTEMVYEFPELQGVMGREYALIQGEEQLVADAIFEHYLPRFSGDELPKTD 439 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 +S+ADK+DT+ + I P+G+ DPYALRR +GII IIL + L++ +E Sbjct: 440 EGAFISIADKIDTITGCFIIGLIPTGNNDPYALRRNAIGIINIILNKNYRLSLTELLEKA 499 Query: 533 NLILFFHDRL--------------------KLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 I + D+L ++ +IR D+ EA++ D+++ I + Sbjct: 500 --IDNYKDKLSYQKEEILEKTKEFILTRAKQIATSQYNIRADVFEAVVAV-FDDIVQIFN 556 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K LNE + + S KRI + KN + E L+ EK L +I Sbjct: 557 AAKALNEVYEKPEFVTLSTSYKRI----SNILNKNNWNNTEYKEDLLVESEEKELNKLIK 612 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + + + ++Y+ ++L S +P++ FFD VLV + E+R+NRLSLL +K + Sbjct: 613 ENEEKLNQLLSEEKYNDAINVLLSFSKPVDNFFDNVLVMDKNEEIRNNRLSLLAKLKTLF 672 >gi|304385064|ref|ZP_07367410.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici DSM 20284] gi|304329258|gb|EFL96478.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici DSM 20284] Length = 690 Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 214/730 (29%), Positives = 359/730 (49%), Gaps = 77/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLEI EEIPA + + + L+ + LKE + Y ++ Q+ TP RL + + GL Sbjct: 5 YLLEIGLEEIPAHVVTPSIQQLAQKVAKFLKENRLSYDSIEQFSTPRRLAIRINGLGDRQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E+ GP G KA GF + GL T+ D K VY+ L + Sbjct: 65 PDIEEDAKGPARKIAQDADGNWTKAAIGFTKGQGL-TVDDITFKTIKGTEYVYVHKLIQG 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K +++L I V ++ + +P M+W+ F ++RP++ ++ IL ++++ Sbjct: 124 K-TTQEILPGIKDV-VESLNFPTMMKWANYD-----FKFVRPIRWLVSIL-----DDEVL 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + +I G + GHRF + + + Y L+ V++D E R+ I +A Sbjct: 172 PFQILDIKAGRQSQGHRFLG-KAVDLANPSEYEEKLQAEFVIVDAEKRKALIREQIQAIA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 E+ + DLLEE+ LVEW F G FD KYL +PEE++ +++ +Q+ F R ++ Sbjct: 231 QEENWEVTPNADLLEEVNNLVEWPTAFSGKFDPKYLAIPEEVLITSMRDHQRFFFVRNQD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V N + +++GN +V+ ARLEDA F+ DQ N Sbjct: 291 GKLLPNFISVRNGN-KEHLENVIRGNEKVLTARLEDAAFFYDEDQKN------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---R 413 +D + RL V FH KIGT E+++R+ + + IA+++ D + R Sbjct: 337 -------SIDYYVDRLK--KVSFHDKIGTMAEKMTRVGSIAQVIAKMLGLDAETAEDLQR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P + + Sbjct: 388 AAAIYKFDLVTGMVGEFPELQGVMGEKYALLKGEKPAVAQAIREHYMPNSAEGELPESTV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 ++LADK D + +F++ PSGS DPYALRR GI+RI+ + + L++F E Sbjct: 448 GAVLALADKFDNIFSFFSAGMIPSGSNDPYALRRHAYGIVRILAQRDWSLDLNKFEEAVK 507 Query: 531 --------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 D+N + FF+DR+K YL + + +D+ +A+L N+ TI+ Sbjct: 508 QALADDQTSFGVDVDKNFAEVVEFFNDRIKQYLDHQSVSYDIEDAVLAGSQHNVTTII-- 565 Query: 574 IKHLNEFFSSAK-GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 E ++AK + F + + ++ I K L + PQ E E +L+ +I+ Sbjct: 566 --AAAEVLTNAKAADSFKDEIEALTRVQRIATKNTTAGDLAVDPQLFNNETEGKLFDLIT 623 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 E+M+ L S+ I +FD +V D +++ NRL+++ + N++ Sbjct: 624 KI-----EAMNDSDMAAFFKELTSLTPAITEYFDATMVMDKDAKIKANRLNMMSRLANLV 678 Query: 693 LIVINVQKIV 702 L V ++ K++ Sbjct: 679 LRVGDLTKVM 688 >gi|229587216|ref|YP_002845717.1| glycyl-tRNA synthetase subunit beta [Rickettsia africae ESF-5] gi|259511930|sp|C3PLY4|SYGB_RICAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|228022266|gb|ACP53974.1| Glycyl-tRNA synthetase beta chain [Rickettsia africae ESF-5] Length = 664 Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 229/691 (33%), Positives = 352/691 (50%), Gaps = 67/691 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 +PA MQ A E I + EE I+ ++ + P R+ L+ L + K EE G Sbjct: 13 MPAFMQKNAEEGYLNIFTKIF-EENEIFAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + A + AI+GF ++ +S ++ +Y ++K + R I+++L I+ A Sbjct: 72 PSIEAPEAAINGFCKA---HNVSKLELPTKLISNQLYYFFVKKTEEREIKEILPEIIIEA 128 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E I+ + + NITYG Sbjct: 129 INKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYG 178 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR ++V + Y L E V+L+ R I LA++ L + ED L+E Sbjct: 179 HRLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELANSHELIIKEDNRLVE 238 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + Sbjct: 239 EVVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRF 298 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 ++ ++QGN +V++ARL DAL+F K+ D++K L+ R+ + Sbjct: 299 TN-AELVIQGNEKVLSARLSDALYFCKQ--------------------DIAKTLESRLGQ 337 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L+ FHAK+G E++ RI + IA + D+ R L K+DL +E+V EFP Sbjct: 338 LEA--ATFHAKLGNLREKIERITDICNYIAP-NNKDLITAAR---LCKSDLVSEMVGEFP 391 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + N AI +H KP+G +N+P+ ++ KLD+L+ Sbjct: 392 DLQGIMGYYYAKHEGLNAEIAAAIRDHYKPQGLSDNLPSGNAALLALAD-KLDSLVGLMI 450 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------EDQNLIL-FF 538 E P+GS DPYALRR LGIIRIILENK+++ + I E++NLI+ FF Sbjct: 451 AGETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFF 510 Query: 539 HDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R K Y +D DI LI A+L + NL+ + L EF G++ L + KR Sbjct: 511 KERAKFYFKNDYDIA--LINAVL---DLNLVDTNFKLDALKEFLIEDAGKQLLNAYKRAS 565 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 I+ +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 566 NIIG-----DQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSL 620 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 PI FFD VLVN D ++ NRLSLLQ I Sbjct: 621 LTPITSFFDNVLVNDSDPKIAQNRLSLLQNI 651 >gi|307543598|ref|YP_003896077.1| glycyl-tRNA synthetase subunit beta [Halomonas elongata DSM 2581] gi|307215622|emb|CBV40892.1| glycyl-tRNA synthetase subunit beta [Halomonas elongata DSM 2581] Length = 690 Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 213/700 (30%), Positives = 343/700 (49%), Gaps = 61/700 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ EE+P ++ L+ + L + V + ++ Y +P RL + + L+ Sbjct: 8 FLLELGVEELPPSAIDTLSDALADGIRQGLDDANVEHGDIDAYASPRRLAVRVAALADKQ 67 Query: 64 PEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P++ ER GP + A KA +GF RS G+ S ++ D KG ++P Sbjct: 68 PDREVERRGPSLAAAFKDGEPTKAAEGFARSCGVSVDSLIHLETD--KGTWLGYREQQPG 125 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L IV AI +P PK+MRW + S RP ++ + E++++ Sbjct: 126 EATTTLLPAIVEKAIAALPVPKNMRWGASRVEFS-----RPAHWLVMLY-----GERVVE 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G T GHRFHAP PI++ D Y+ +E A VL D E RR I A Sbjct: 176 ASALGLQAGRTTRGHRFHAPEPIELGHADDYLGAMENAWVLADREQRRERIREQVLAEAE 235 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V D++LL E+ GLVEW GSFD+++L +P E + ++K NQK F +G Sbjct: 236 VQEATAVIDEELLIEVSGLVEWPVALTGSFDERFLEVPAECLVSSMKANQKYFHLLDDDG 295 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI +SNI S ++QGN +V+ RL DA F + Sbjct: 296 KLKPRFITISNID-SQAPELVIQGNEKVIRPRLADAAFF--------------------Y 334 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 + D +PL +R+ L VVF ++GT ++ R + IA ID DV RA L Sbjct: 335 DTDRQRPLVERVQELS--SVVFQQQLGTLADKAHRSAAVAAFIAGRIDGDVGHARRASEL 392 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL TE+V+EFPELQG +G+ YA E+ A+EE PR + VP+ + + + Sbjct: 393 AKCDLVTEMVQEFPELQGTMGRYYATHDGEDAEVARALEEQYLPRFAGDEVPSTRTGLAL 452 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI---------------- 521 +LAD+LDTL + I ++PSG+KDP+ALRRA++G++ I+++ ++ Sbjct: 453 ALADRLDTLTGIFGIGQRPSGTKDPFALRRASIGVLNILIKGELDLDLRELLELAAAQHQ 512 Query: 522 DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++P ++ + D+ ++ + DR + + D I ++ A+ L ++ ++ F Sbjct: 513 ELPYAEGLVDE-VLAYMLDRFRAWGRDEGIEAEVYLAVRARPVTKPLDFARRLQAVHAFA 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S + + KR+ ILA K++ EI+ E+ L +AE+ L ++ + Sbjct: 572 SREEAAALAAANKRVSNILA---KQDDEIAPEVDTSLLAEDAERDLAEALAQCREKVAPL 628 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 RY D+L + P++ FFDQV+V +D V+ NR Sbjct: 629 FAEARYSDALDVLAGLRNPVDRFFDQVMVMAEDAAVKRNR 668 >gi|332304394|ref|YP_004432245.1| glycyl-tRNA synthetase, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171723|gb|AEE20977.1| glycyl-tRNA synthetase, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 692 Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 208/719 (28%), Positives = 346/719 (48%), Gaps = 61/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K A+ + + L + Y ++ + +P RL + + L+ Sbjct: 5 NLLIEIGTEELPPKALCKLAQAFADNMQNALDAAELKYASVEWFASPRRLAVNVIDLAEQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 65 QEDKLIEKKGPAVSVAFDEAGQATKAAQGWARSNGITVEQAERLTTD--KGEWLLFKGES 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 I +L ++ A++K+P PK+MRW + S+ +IRP+ ++ + A+ K I Sbjct: 123 KGETISSLLPPMIDGALKKLPIPKAMRWGS-----SSIQFIRPVHTVTILFGADVIKGNI 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +D + GHRFH + + Y+ LE VL D R+ I Sbjct: 178 LGID-----SDRVVQGHRFHGEKQFSLAHANDYLAQLEAHYVLADFAARKAKIQQQVKAT 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + +LL+E+ LVEW V SFD+ +L +P+E + T+K +QK F + Sbjct: 233 AQKENAVADMNDELLDEVTALVEWPVVLTASFDESFLEVPKEALIYTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + F+ V+NI++ D I+ GN +V+ RL DA F Sbjct: 293 NGQLKSRFVFVTNIESKDP-KQIISGNEKVIRPRLADAEFF------------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D L+ R+ L V+F ++GT E+ RI L IA ++D+D AL RA Sbjct: 333 -FNTDKKTTLESRLESLKT--VLFQKQLGTLYEKSQRIAELAGTIASMLDSDAALASRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFP++QG +G YA E+ + A+ E PR + +PT+ IS Sbjct: 390 LLSKTDLMTNMVMEFPDVQGVMGMHYAKNDGESDAVALALNEQYMPRFAGDQLPTSHISS 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADK+DTL+ + I + P G KDP+ALRRA +G++RI +E K+ + L++ ++ Sbjct: 450 AVALADKIDTLVGIFGIGQVPKGDKDPFALRRAAIGVLRISVEMKLPLDLTELVQASIDS 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D++I D+I+A+ I+ ++ Sbjct: 510 FADKLTHVDDLTSQVVDFILGRFRAWYQDQNIDIDVIQAVAARRPTKPADFAARIEAVSG 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + G + KR+ ILA K S I P E E L ++ + Sbjct: 570 FKRLSSGLALASANKRVANILA---KNKITGSTNIDPSLFESEHETALADALNSIEATVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ Y + D L ++ ++ FFD V+V +D +VR+NRL+LL ++ + L+V ++ Sbjct: 627 AFVNDANYQGVFDQLATLHVKVDDFFDNVMVMAEDEKVRNNRLALLSKLRTLFLLVADI 685 >gi|15673078|ref|NP_267252.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis Il1403] gi|25009321|sp|Q9CGK0|SYGB_LACLA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|12724052|gb|AAK05194.1|AE006341_13 glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis Il1403] gi|326406646|gb|ADZ63717.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis CV56] Length = 673 Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 229/709 (32%), Positives = 359/709 (50%), Gaps = 73/709 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + LKE + + + ++ TP RL + ++GL+ Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMETFLKENRLEFDKIIKFSTPRRLAIIVEGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G T D +K GD Y A Sbjct: 61 EASEAIDEEVKGPSAKIAKDAQGNWSKAIQGFSRGQG-ATPDDLILK-----GDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HIDGVKAEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++ DL ++ + GHRF A +++++ + Y + E VL+D E R+ I Sbjct: 165 KVVAFDLLDVTANRFSRGHRFLANVEVELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENKWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-ENIENVVLGNEKVLVARLEDAEFFWKEDQK----------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK---IAQLIDADVAL 410 LK + L ++A+ V FHAKIG+ E ++R + + K IA L D + Sbjct: 333 -LKI-----EDLVAKLAK-----VTFHAKIGSITEHMARTKEIAAKLADIAGLTDEEKRD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVSAAIREHYMPTSAEGELPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS FI Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 530 --EDQN---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI-----KHLNE 579 E +N ++ F R++ L ++ RHD++EA + N ++ +++ L+E Sbjct: 502 QFEGENHLEILDFVKARIQKLLLEKLDRHDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F A + + R ++ KK ++I EI+P +AE+ LY V+ Sbjct: 562 PFKPA-----IENVSRSINLV----KKAKDIK-EINPTLFEEDAEEALYNVVISLQNQWT 611 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +++ I +HS+ IE FF+ V+V +D VRDNR++LL + Sbjct: 612 YMPGEEKFRAI---VHSLAPAIETFFESVMVMAEDLSVRDNRIALLSEV 657 >gi|146329175|ref|YP_001209611.1| glycyl-tRNA synthetase, beta subunit [Dichelobacter nodosus VCS1703A] gi|229470696|sp|A5EV43|SYGB_DICNV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146232645|gb|ABQ13623.1| glycyl-tRNA synthetase, beta subunit [Dichelobacter nodosus VCS1703A] Length = 689 Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 206/708 (29%), Positives = 354/708 (50%), Gaps = 61/708 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+P R + A + + +L + + + + TP RL ++ L+ Sbjct: 6 LLIEIGTEELPTRAVTELASAGAQLWDNVLTTALIPHGEIEAFGTPRRLAWRVRQLAVKQ 65 Query: 64 PEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ ER GP + A K KA GF S G+ + I+ +KG + K Sbjct: 66 TDQKIERKGPSLQAAKDKNNAWTKAALGFAASCGVD-VEQLAIETT-EKGQWLIFRGEKM 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + D+L + + K+P K MRW +++RP+ ++L + A + + Sbjct: 124 GENVADLLPDLFAEVMDKLPIAKRMRWGDCDH-----AFVRPVHNLLVL-----ADDNVW 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 DL+ + +++ GHR H P+ ++ Y DLE A V++D E R N I LA Sbjct: 174 DLEFFGVASQHLSQGHRVHHAEPVAIRHAKTYEADLEAAYVIVDHETRCNRIREQVQALA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +G + + + L++E+ L EW G+FD+ +L +P E++ T++ +QK F Sbjct: 234 RDLGGKALMPEALVKEVASLTEWPIAIAGAFDRSFLKMPPEVLITTMQDHQKTFAVMDTL 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N++ S + +GN +V+ R DA FW++D Sbjct: 294 GTLLPYFIAVANLE-SRNEEEVRKGNEKVIRPRFADAEFFWQQD---------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L +PL+ + +L+ V++ K+GT E+ R++ + ++ + AD V A Sbjct: 337 ----LKRPLEDYLPQLER--VIYQEKLGTLAEKTRRVQTIACELTAMTAADKNSVYTAAR 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+K+DL T +V+EFPELQG +G+ YA+ Q + A+EE P + +P + IT Sbjct: 391 LAKSDLQTAMVQEFPELQGVMGRYYALHQGLSAEVAQALEEQYFPTAAGDKLPQTAVGIT 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 +S+A+KLDTLI ++I +P+GSKDPYALRR +G+IR+++E K+ + L+ ++E Sbjct: 451 LSIAEKLDTLIGGFSIGAQPTGSKDPYALRRMAIGLIRLLIEKKVPLLLTPWLEKAAGQF 510 Query: 532 ------QNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 +N ++ + +RL+ Y +++I ++++A+L DNL+ I ++ L F Sbjct: 511 HDALGAKNFVMDVRAYILERLQAYYREQNIAPEIVQAVLALNGDNLVDIDQRVRALAPFS 570 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 +S F SAKRI IL KKN + L AEK L+ + + Sbjct: 571 NSDAALSFFASAKRIRNIL----KKNGTQQTAVRTDLLQESAEKHLWQQWEQMHNALLAA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + Y L S+ EP+E FF QV+V ++ +V+ NRL+LL ++ Sbjct: 627 VSAGNYETALQQLGSLAEPLEAFFAQVMVMTENPDVQINRLALLTALQ 674 >gi|262370018|ref|ZP_06063345.1| glycyl-tRNA synthetase subunit beta [Acinetobacter johnsonii SH046] gi|262315057|gb|EEY96097.1| glycyl-tRNA synthetase subunit beta [Acinetobacter johnsonii SH046] Length = 689 Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 215/719 (29%), Positives = 357/719 (49%), Gaps = 66/719 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLAFDSIEAYAAPRRLALKIINVDGAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K YL ++ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITADQVSTFQAGKVEKV--CYLKDVQG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + + Sbjct: 125 --QSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----KDNDV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ GN+TYGHRFHAP I + + D Y+ L A V+ + E R+ I L Sbjct: 173 VDATIQDHKAGNVTYGHRFHAPEAITLANADAYLDALRAAKVVANFEERQAIIDQQVKTL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A V + DL +E+ LVEW SF++++L +P+E + T++ NQK F Sbjct: 233 ADEVNAIAIVPADLRDEVTALVEWPVALRASFEERFLAVPQEALITTMQDNQKYFCLVNA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 293 DNKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL R +L ++VF A++GT + RI L ++ + A+ A ++A Sbjct: 339 -------QPLASRKEKL--ANMVFQAQLGTLWNKSERIAKLAVALSAITGANPADAEKAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K Sbjct: 390 LLAKCDLTSELVGEFPELQGIAGTYYARIEGENDEVAEALGEQYLPKFAGDVLPQTKTGT 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 T++LAD+LDTL + I + P+GSKDP+ALRR+ +GI+R++ EN +DI + + I+ Sbjct: 450 TIALADRLDTLTGIFGIGQAPTGSKDPFALRRSAIGILRLVTENNLDISIEELIKLALAS 509 Query: 531 --------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 D+ L + F R + D+ + D+I+A+ + L + +N Sbjct: 510 YGDVLKDHDKTLADAVAFLEGRYRAKYEDQGVAVDVIQAVQALSPKSPLDFDKRVTAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + KR+ ILA K + EI L+ +AEK LYA I +Q Sbjct: 570 FRSLPEAAALAAANKRVANILA----KEAAPTGEIVESKLVEDAEKALYAEIQAILPVVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y + L ++ PI+ FFD V+V +D E++ NRL LL ++++ V ++ Sbjct: 626 PLLAAKDYTEALSKLAALRAPIDAFFDGVMVMAEDAELKANRLRLLAQLRDLFTSVADI 684 >gi|116511935|ref|YP_809151.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris SK11] gi|123320411|sp|Q02Z93|SYGB_LACLS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116107589|gb|ABJ72729.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris SK11] Length = 673 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 235/711 (33%), Positives = 360/711 (50%), Gaps = 77/711 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + L E + + + ++ TP RL L ++GLS Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMEAFLNENRLKFDKIIKFSTPRRLALIVEGLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G T D +K GD Y A Sbjct: 61 ESSEAIDEEVKGPSAKIAKDAEGNWSKAIQGFSRGQG-ATPDDLILK-----GDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HVDGVKAEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ DL ++ + GHRF A I++++ + Y + E VL+D E R+ I Sbjct: 165 EIVAFDLLDVTANRFSRGHRFLANVEIELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENNWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-EHIENVVLGNEKVLVARLEDAEFFWKEDQK----------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK---IAQLIDADVAL 410 LK DL L + V FHAKIG+ E ++R +++ K IA L D + Sbjct: 333 -LKIE-DLVAKLGK---------VTFHAKIGSITEHMARTKLIAAKLADIAGLTDEEKVD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVAAAIREHYMPTSADGQLPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS FI Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 530 --EDQN---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI-----KHLNE 579 E QN ++ F R++ L ++ R+D++EA + N ++ +++ L+E Sbjct: 502 QFEGQNHAEILEFVKARVQKLLLEKLDRYDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY-AVISDFGTHI 638 F A + + R ++ KK +I+ EI+P + E+ LY AVIS + Sbjct: 562 PFKPA-----IENVSRSINLV----KKAADIA-EINPALFEEDTEQALYDAVIS-----L 606 Query: 639 QESMDHKRYHQ-IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 Q +K + ++H++ IE FFD V+V +D VRDNR++LL + Sbjct: 607 QNQWTYKPCEEKFRAIVHTLAPAIEAFFDNVMVMAEDLAVRDNRIALLSEV 657 >gi|39995686|ref|NP_951637.1| glycyl-tRNA synthetase subunit beta [Geobacter sulfurreducens PCA] gi|81832117|sp|Q74FM7|SYGB_GEOSL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|39982449|gb|AAR33910.1| glycyl-tRNA synthetase, beta subunit [Geobacter sulfurreducens PCA] gi|298504697|gb|ADI83420.1| glycyl-tRNA synthetase, beta subunit [Geobacter sulfurreducens KN400] Length = 687 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 219/727 (30%), Positives = 347/727 (47%), Gaps = 71/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LEI +EEIPA KA D+ I+ L+ + + ++ + TP RL L +KGL Sbjct: 4 ELFLEIGTEEIPAGFLPKAMADMEAIVTKELENARLAFGEVKTFATPRRLALVVKGLPTV 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ LGP G KA +GF R G+ S + + KG+ AV ++ Sbjct: 64 QPDAEITALGPARNIAFGPDGTPSKAAEGFARGQGVDVASLTLVSTE--KGEYVAAVRKE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R + D+L I+P + +P+ KSMRW+ + RP+ I+ + + Sbjct: 122 SGRPVPDLLAEILPRLVGGIPFRKSMRWADLD-----VRFARPIHWIVALF-----DGVV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + GN++ GHRF A P V+ HY+ + E V+ DPE R+ I + HR+ Sbjct: 172 VPFAFGNVQSGNVSRGHRFMANQPFPVRDFAHYLDECERHFVIPDPERRKETIRREIHRV 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G L+ D+ LL+E+ LVE+ V G+F +L +P E++ +++++Q+ F Sbjct: 232 AKTAGGHLLPDEGLLDEVAYLVEYPSVVHGTFSPDFLKVPREVLITSMRSHQRYFSIVDD 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI ++N D + +V+GN RV+ ARL DA F++ DQ Sbjct: 292 AGKLMPGFITINNTLTEDP-SVVVKGNERVLRARLSDARFFFEEDQK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDRA 414 L+ R+ L +VV+ K+GT E++ R R L + +A L++ V A RA Sbjct: 338 -------VKLETRVESLK--NVVYQQKLGTSYEKMERFRALAEGLADLLNPAVKAKTSRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL + +V EFPE+QG +G+EYA+LQ E+ AI EH P ++P + I Sbjct: 389 AFLCKADLVSGMVGEFPEVQGIMGREYALLQGEDAEVAAAIAEHYLPTQAGGDLPASDIG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN--------------- 519 VS+ADKLDT+ + + P+GS DPYALRR+ LGII IIL+ Sbjct: 449 AFVSIADKLDTICGCFGVGLIPTGSADPYALRRSALGIINIILDRGCRLSLEGEIGKALE 508 Query: 520 ----KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 K+ P ++ + D ++ FF R + DR D ++A + D+L+ I Sbjct: 509 LLSAKLTRPAAEVMAD--VLEFFRGRFVNLMADR-YPADAVDAAIAAGFDDLVDAEARIG 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L F + ++ KR+ I+ + + +L P AE L+A Sbjct: 566 ALAAFKGRPDFDSLAVAFKRVCNIVKDGVDQPVDAALFQEP------AEGALFAAFQQVR 619 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ Y + ++ ++ FFD+V+V +D VR NRL+LL I + V Sbjct: 620 ADVEARTASGDYLAALTGIAALKGAVDDFFDKVMVMAEDERVRTNRLALLTGIARLFGGV 679 Query: 696 INVQKIV 702 + KI Sbjct: 680 ADFAKIA 686 >gi|281491595|ref|YP_003353575.1| glycyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. lactis KF147] gi|281375313|gb|ADA64826.1| Glycyl-tRNA synthetase, beta chain [Lactococcus lactis subsp. lactis KF147] Length = 673 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 229/709 (32%), Positives = 359/709 (50%), Gaps = 73/709 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + LKE + + + ++ TP RL + ++GL+ Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMETFLKENRLEFDKIIKFSTPRRLAIIVEGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G T D +K GD Y A Sbjct: 61 EASEAIDEEVKGPSAKIAKDAQGNWSKAIQGFSRGQG-ATPDDLILK-----GDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HIDGVKAEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++ DL ++ + GHRF A +++++ + Y + E VL+D E R+ I Sbjct: 165 KVVAFDLLDVTANRFSRGHRFLANVEVELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENKWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-ENIENVVLGNEKVLVARLEDAEFFWKEDQK----------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK---IAQLIDADVAL 410 LK + L ++A+ V FHAKIG+ E ++R + + K IA L D + Sbjct: 333 -LKI-----EDLVAKLAK-----VTFHAKIGSITEHMARTKEIAAKLADIAGLTDEEKRD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVSAAIREHYMPTSAEGELPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS FI Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 530 --EDQN---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI-----KHLNE 579 E +N ++ F R++ L ++ RHD++EA + N ++ +++ L+E Sbjct: 502 QFEGENHLEILDFVKARIQKLLLEKLDRHDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F A + + R ++ KK ++I EI+P +AE+ LY V+ Sbjct: 562 PFKPA-----IENVSRSINLV----KKAKDIK-EINPILFEEDAEEALYNVVISLQNQWT 611 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +++ I +HS+ IE FF+ V+V +D VRDNR++LL + Sbjct: 612 YMPGEEKFRAI---VHSLAPAIETFFESVMVMAEDLSVRDNRIALLSEV 657 >gi|255066574|ref|ZP_05318429.1| glycyl-tRNA synthetase, beta subunit [Neisseria sicca ATCC 29256] gi|255049158|gb|EET44622.1| glycyl-tRNA synthetase, beta subunit [Neisseria sicca ATCC 29256] Length = 687 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 220/661 (33%), Positives = 345/661 (52%), Gaps = 62/661 (9%) Query: 46 YWTPHRLFLYLKGL-SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQ 98 Y +P RL + +K + S + +KI ++ GP V GA KA++GF R G + I D Sbjct: 50 YASPRRLAVQVKNVKSVQADQKIVKK-GPAVANAMKDGAPTKALEGFARGAGAK-IEDLT 107 Query: 99 IKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRP 158 I D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP Sbjct: 108 IVHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRP 161 Query: 159 LKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMV 217 + L +L D I+++ + + GN T GHRF + I +++ D Y + E+ V Sbjct: 162 VHG-LIVLHGSD----IVNVSVLGLQSGNQTLGHRFLSSGEITIENADSYAAQMREQGKV 216 Query: 218 LLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEE 277 + R+ AI + A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 217 VASFTERKAAIQTALNEQAGRLKATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQE 276 Query: 278 LIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFW 337 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+ Sbjct: 277 CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFY 335 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 K+DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 336 KQDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIA 373 Query: 398 KKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+ Sbjct: 374 AHIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQ 433 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R+++ Sbjct: 434 HYQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLM 493 Query: 518 ENKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + +D+ L Q D F RL + L + D D++ A+L + Sbjct: 494 QYGLDVNELIQTTFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQP 552 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L + ++ + F + + KR+ +L KK E+ L + E Sbjct: 553 RRLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVDESLLQQDEE 608 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LYA D I ++ + L S+ ++ FFD V+V +D V+ NRL+L Sbjct: 609 KALYAAAQDLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDPAVKQNRLNL 668 Query: 685 L 685 L Sbjct: 669 L 669 >gi|212211691|ref|YP_002302627.1| glycyl-tRNA synthetase subunit beta [Coxiella burnetii CbuG_Q212] gi|212010101|gb|ACJ17482.1| glycyl-tRNA synthetase beta chain [Coxiella burnetii CbuG_Q212] Length = 692 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 228/704 (32%), Positives = 361/704 (51%), Gaps = 65/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P++ ER GP V A A GF +S G +S Q+K K KKG+ + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCG---VSTAQLKVKKTKKGEFIYCEIE 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + D+L I+ A++++P PK+MRW H ++RP+ I+ +L + Sbjct: 125 QPGQNTLDLLPNIIQSALKQLPTPKAMRWGD-HKEF----FVRPVHWIILMLGKDLVPAT 179 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ K C T GHRFH P I V D Y + L MV+ D E RR I + Sbjct: 180 LLG---KMASCE--TRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQ 234 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 235 KAASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIK 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 294 NKNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND------------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L+ R+ +L DV+F ++GT ++ RI L IA+ + D L R Sbjct: 340 -------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQTNIDEQLAAR 390 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL +E+V EFP LQG +G A E +AI+EH PR + +P N + Sbjct: 391 AGLLSKCDLVSEMVYEFPTLQGIMGYYCAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLL 450 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 451 SACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAK 510 Query: 533 ----------NLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N++ F +RL+ + ++++ + A+L + L IK + Sbjct: 511 NNYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQ 570 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 F + + + + KR+ IL +K+ E+ S I +AE L + + Sbjct: 571 HFQTLPEADALAAANKRVSNIL---KKQAAELKSKTIDHSLFDSDAEHLLADQLKERAEL 627 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y + L S+ EPI+IFFD+V+V VDD+E R+NR Sbjct: 628 VNNLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENR 671 >gi|307246733|ref|ZP_07528803.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255718|ref|ZP_07537522.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260170|ref|ZP_07541880.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852433|gb|EFM84668.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861395|gb|EFM93385.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865816|gb|EFM97694.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 689 Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 219/722 (30%), Positives = 359/722 (49%), Gaps = 67/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 172 LIEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D AI++GN +VV RL DA F+K Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFFFK--------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL + L+ R+ RL+ V+FH ++GT ++ +RI L +IA I AD A +R Sbjct: 336 -----TDLKQRLEDRLPRLET--VLFHQQLGTLRDKTARIEALAGEIAAQIGADKAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLSLDLEDLVRKSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 VLFGDKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA--VISDFGT 636 F + E + KR+ ILA K EIS EI + LL+EAE++ A VIS T Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISTEID-RSLLVEAEEKALAEQVIS-LQT 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V Sbjct: 624 ELAPTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|295424884|ref|ZP_06817599.1| glycyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] gi|295065450|gb|EFG56343.1| glycyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] Length = 689 Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 220/720 (30%), Positives = 359/720 (49%), Gaps = 84/720 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 4 DYLFEIDTEEMPAHVVSRSVKQLADRTKKFLKENGLKFKDIKTYSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGITT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + ++ K Sbjct: 121 KEGKKASDILLGMSDI-IKDMTFPTKMRWDSND-----FEFVRPIHWLVSLYDSDVIPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y+ L++ V++D + R++ I+N + Sbjct: 175 ILD-----ITAGRKTEGHRFLGDSVV-LANADDYVEALKDQFVIVDAKERKDMIVNQMND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ EDK+LLEE+ LVE+ VF+GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVKKNNWKVKEDKNLLEEVTNLVEYPTVFVGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L N FI V N D ++ GN +V+ ARL+DA F+ D+ P Sbjct: 289 QNGKLINHFIAVRN-GNKDYLDNVISGNEKVLVARLDDAQFFYDEDRK-YP--------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 LS +D+ M +V FH KIG+ E++ R+R++G +A+ + D +V Sbjct: 338 ------LSHFVDK------MKNVSFHDKIGSMAEKMKRVRLIGDYLAKRWNLDENVVKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +P Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGENEEVAVAIKEHYMPTTAEGELPET 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +S+ADK+DT++ F+ PS S DPYALRR GI+RI+L K +P +Q + Sbjct: 446 TVGSLLSVADKIDTILTFFGAGMIPSSSNDPYALRRNAYGIVRILLNQKWSLPFNQVLPE 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ + LF DR+K YL + ++D+I+A+L + I+ Sbjct: 506 IVELVDGKTPAKLPKTNEEDEQIALFIRDRIKQYLQKNNFKYDVIDAVLASSQQDPSEIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A+ + + S RI IL + N++ E+ +E L+A I Sbjct: 566 SAAKVLGLHHDDAEFKPVVESLTRIDNILKKAKFNNKQA--EVDENLFEDASENELFAGI 623 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++QE + DL + I+ +FD ++ D++VR+NRL+ L + Sbjct: 624 Q----NLQE------IQNLADLYQGFVQLQPVIDRYFDTNMIMAKDKKVRNNRLAQLSQV 673 >gi|121534207|ref|ZP_01666032.1| metal dependent phosphohydrolase [Thermosinus carboxydivorans Nor1] gi|121307310|gb|EAX48227.1| metal dependent phosphohydrolase [Thermosinus carboxydivorans Nor1] Length = 685 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 226/733 (30%), Positives = 355/733 (48%), Gaps = 84/733 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA+ A L I L+ V + N+R TP RL L + + Sbjct: 4 DLLLEIGTEEIPAKFMPGALAQLESIAKSKLETYRVSFSNVRVVGTPRRLALIVYQVEEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E GP + G KA GF RS G+ +S + KD G VY A++ + Sbjct: 64 QTDRKSENKGPSLKIAYDEKGLPTKAALGFARSQGVD-VSQL-VAKD---GYVY-AIVEE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R ++++L ++P I + +PK+MRW + RP++ ++ + E + Sbjct: 118 AGRPVQEILPILLPEIILALSFPKNMRWGDLD-----VRFARPIRWLVALYGNE-----V 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + GN+T GHRF + P+ + S D Y L E V++D + RR I + Sbjct: 168 VPFTLAGVASGNMTQGHRFLSKGPVVISSPDDYFAKLAEHHVMVDQDVRRRVIREQVESI 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G + D++LLEE++ LVE+ G F++KYL LP E++ ++ +Q+ F + Sbjct: 228 AVDQGGVVSIDEELLEEVVYLVEYPTALYGRFEEKYLSLPPEVVITPMREHQRYFPVFGK 287 Query: 296 EGVLANCFILVSNIQASDGGAAIV----QGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N GGA + GN RV+ ARL DA F+ DQ Sbjct: 288 DGKLLPVFITVRN-----GGAEYIDIVRHGNERVLKARLADAQFFFTEDQKT-------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 PL +R+ +L +VF +GT ++ R+ L IA+ L ++++ Sbjct: 335 ------------PLAERVEKLKT--IVFQEGLGTLYDKTLRLARLAAVIARKAGLPESEI 380 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++R+ L+KADL T +V EF ELQG +G+EYA L E + AI EH PR + + Sbjct: 381 PTIERSAYLAKADLVTGMVYEFTELQGIMGREYARLSGEPEAVAQAIFEHYLPRFAGDKL 440 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + V +ADKLD ++ ++ P+GS+DPYALRR LGI+ I+++ K + L++ Sbjct: 441 PQSPAGRVVGIADKLDNIVATFSRGLIPTGSQDPYALRRQALGIVNILIDAKYHLSLTEM 500 Query: 529 IEDQNLILFFHD-----------------RLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ +L HD R+K L + +RHD+I+A++ DNL Sbjct: 501 VQHTMDLLGIHDPDRRTKLIDEIGDFFRLRIKNILTEEGMRHDMIDAVIAAGTDNLYDTW 560 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQIL--AIEEKKNREISLEISPQYLLLEAEKRLYA 629 K L E ++ +R Q A KN I+ I P EAE LY Sbjct: 561 LRAKAL-------AFEGGTMAMQRAVQAFTRAGNLAKN-AITETIDPSLFSTEAEHNLYQ 612 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + E + + Y + ++ + PI+ FF V+V V+D VR+NRL+LL+ I Sbjct: 613 AYLSARQTVAEKLHVRDYVGVLKVMAEMAGPIDAFFGAVMVMVEDMAVRNNRLALLKAIT 672 Query: 690 NIILIVINVQKIV 702 + V ++ KIV Sbjct: 673 GLTANVADLSKIV 685 >gi|119503578|ref|ZP_01625661.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2080] gi|119460640|gb|EAW41732.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2080] Length = 694 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 218/714 (30%), Positives = 346/714 (48%), Gaps = 68/714 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L E+ +EE+PA AE L ++ L G+ Y + + + TP RL + + G+S Sbjct: 7 DLLFELGTEELPAGPLATMAEALGSSILDGLTHHGLEYGSSKIFATPRRLAVLVAGVSLV 66 Query: 63 SPEKIEERLGPRVGAGKK-------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 +P+K E LGP V A + A GF + G+ ++D + + KGD L V R Sbjct: 67 APDKTVEALGPPVTAARDKQGDWTPAALGFAKKQGVD-VTDLTVI-EASKGD-RLGVRRT 123 Query: 115 -KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R + VL I+ A+ +P K MRW ++RP++ +L +L Sbjct: 124 ESGARAVA-VLPEILANAVASIPVTKRMRWGRER-----HEFLRPIQWVLALL-----DT 172 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ID+ + I T GHRFH I + S Y L A VL D + RR I + Sbjct: 173 QVIDVVIMGITSDRQTLGHRFHHREAITLASPAKYEETLLAAYVLADFDLRRERIRSQVV 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A + V D+ LL E+ GLVEW GSFD +L +P + ++K +QK F Sbjct: 233 AIADGLQANAVIDETLLNEVTGLVEWPVALQGSFDPAFLEVPAGAVISSMKEHQKYFHLV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + EG L FI +SNI+ S+ A+++ GN RV+ RL DA F Sbjct: 293 SNEGDLLPLFITISNIE-SNRPASVIAGNERVIRPRLSDAAFF----------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F D + PL R +RL+ +VF K+G+ ++ RI L IA+ + AD+ + + Sbjct: 335 ---FETDKATPLADRGSRLE--GIVFQQKLGSVADKTRRIVALSSWIAEALGADIGVTQK 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+K DL T++V EFP+LQG G YA E+ S AIEEH PR + +P + Sbjct: 390 AATLAKCDLVTDLVLEFPDLQGIAGAHYAHHDGESESVASAIEEHYWPRFSGDQLPNSAE 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------- 526 + V+LAD+LDTL+ + I + P+GSKDP+ALRR L +IR+++ +D PL+ Sbjct: 450 ASAVALADRLDTLVGIFGIGQAPTGSKDPFALRRGALAVIRLLV--NLDSPLTLLDLAQR 507 Query: 527 ---QFIED-------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ E+ + + +R + + D++I +++ A+L + + Sbjct: 508 AVREYPENLLDSDTAAAVTEYTLERFRSWYDDQNIAVEVLRAVLATGITGPAEVDRRVSA 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 LN F + + KR+ IL+ K + P AEK+LY + Sbjct: 568 LNVFAGTEAAIALAAANKRVANILS---KSGETRAGTPMPNLFDQPAEKQLYETLEGLKA 624 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +++ Y L ++ P++ FF++V+VN DD +RDNR LL ++N Sbjct: 625 GVAKNISAGDYAAALSKLATLQAPVDSFFEEVMVNADDSAIRDNRHELLAALRN 678 >gi|261393260|emb|CAX50886.1| glycyl-tRNA synthetase beta chain (glycine--tRNA ligase beta chain; GlyRS) [Neisseria meningitidis 8013] Length = 687 Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 343/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLL 219 ++ + + ++++ + + GN T GHRF + I +++ D Y + E ++ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNKTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 220 DPECRRNAILNDA-HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 P R A + A R A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 APFAERKAAIQTALERQARRLNAAVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ E++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-EVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|297539321|ref|YP_003675090.1| glycyl-tRNA synthetase subunit beta [Methylotenera sp. 301] gi|297258668|gb|ADI30513.1| glycyl-tRNA synthetase, beta subunit [Methylotenera sp. 301] Length = 706 Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 224/736 (30%), Positives = 369/736 (50%), Gaps = 67/736 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKG 58 M + L+E++ EE+P + +K E S +L LK +G+ + + + +P RL ++ Sbjct: 3 MQNLLVELFVEELPPKALNKLGEAFSNVLFETLKSQGLAAVGTIVTAFASPRRLAVHATN 62 Query: 59 LSPHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGL--QTISDCQIKKDPKKGDVY 109 + +P+K ++L P G A+ L GL +++ + D K ++ Sbjct: 63 ILAVAPDKTSTQKLMPVSVGLDASGNPTPALIKRLNGMGLDESAVANLTKQADGKNEALF 122 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L VL+K L +D L++ + AI K+P PK M + ++ +++RP S++ + E Sbjct: 123 LDVLQKGVSL-KDGLQSALNEAISKLPIPKVMTYQLADG-WTSVNFVRPAHSLVALHGNE 180 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNA 227 ++ + + GN T GHRF A P+ +++ D Y L+ E V+ RR Sbjct: 181 -----VVAVTALGLTAGNATQGHRFEAAVSPVVLKNADSYAEQLKTEGAVIASFAERRAE 235 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + A+ L+ +ED+ LL+E+ LVE V +G F++ YL +P+E + LT+K NQ Sbjct: 236 IVRQLNAAAAKQNLKPIEDEALLDEVTALVERPNVLLGQFEEIYLEVPQECLILTMKANQ 295 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F L N F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 296 KYFPLLDANDKLTNKFLIVSNISPDDA-SAVIGGNERVVRPRLADAKFFFDQDR------ 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-LIDA 406 K L+ R+ L+ VV+H K+G+QGER R+R + + I + L++ Sbjct: 349 --------------KKTLESRLEGLN--KVVYHNKLGSQGERTERVREIARDIGKALLNE 392 Query: 407 DVALVDR-------AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 D D A LSK DL T++V EFPELQG +G+ YA + AIE+H Sbjct: 393 DAYYGDSLSGKASIAAKLSKTDLVTDMVGEFPELQGIMGRYYAQHEGLENDIAFAIEDHY 452 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 KPR + +P N I + V+LADKL+TL+ ++I EKP+G KDP+ LRR LG+IRI++E Sbjct: 453 KPRFAGDALPRNPIGVVVALADKLETLVGLFSIGEKPTGDKDPFGLRRQALGVIRILIEK 512 Query: 520 KIDIPLSQFI------------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 K+++ L++ I E+ L+ FF DR+ L ++ +EA+L + Sbjct: 513 KLELSLNELIRIAERPFKGLGAENYQLLKAFFSDRVANMLREQGANSQEVEAVLSLNPEI 572 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 L I + + F + + + KR+ IL +K E+ E++ L AE Sbjct: 573 LSDIPQRLNAVRAFSALEEAPALAAANKRVGNIL---KKVEGEVKAEVNANLLQEAAEIA 629 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L +S + + Y L ++ P++ FFD V+VN DD ++ NRL LL Sbjct: 630 LNDALSKVKPEADKLFESGDYTASLKSLAALKAPVDAFFDNVMVNADDPALKANRLGLLA 689 Query: 687 YIKNIILIVINVQKIV 702 + + V ++ K+ Sbjct: 690 ILHQTMNRVADLSKLA 705 >gi|256545607|ref|ZP_05472965.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus vaginalis ATCC 51170] gi|256398684|gb|EEU12303.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus vaginalis ATCC 51170] Length = 689 Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 223/734 (30%), Positives = 367/734 (50%), Gaps = 78/734 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE P+ + + L L++E + + ++ TP R + L GL Sbjct: 1 MSKYLLEIGVEEFPSAYINSTKKQLEEKFKKLIEENKLSVEEIKVESTPRRFAILLDGLE 60 Query: 61 PHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + ++ GP G KA+ GFLR + +SD IK KG+ Y+ V Sbjct: 61 ENKSNELISVKGPSKKIAYDNEGNPSKALLGFLRGQKAE-VSDVIIK--DFKGEEYIYVE 117 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K + L I++VL+ V ++ + +P+SMRW + + RP++ L +L Sbjct: 118 KKEESLSIKEVLQKNVYDLVKSLNFPRSMRWGG-----RSIRFARPIRYFLSLL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I++ D + I N T GHR I V+ +++YI L E V+L + RR IL Sbjct: 168 DEILEFDAEGIKVSNTTKGHRVLGKSEILVEKIENYIELLRENYVILSYKERREIILRGL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +R A +G + ++D+DLLEE+I +VE+ V MG D++YL LP+E+I +K +Q+ F Sbjct: 228 NRYAKEIGGKFLKDEDLLEEVINIVEYPTVLMGELDQEYLKLPKEVIVTPMKDHQRYFPI 287 Query: 293 RTREGVLANCFILVSNIQASDGGAA--IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 L F+LV N D A ++ GN +V+ ARLEDA F+ D N Sbjct: 288 VDDNEKLMPYFLLVRN---GDDFAKENVINGNKKVLTARLEDAKFFYDIDNN-------- 336 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + L+ L F +G+ ++ R+ L K + Sbjct: 337 ------------KKLEDYVEELNRL--TFFEGLGSVYQKTERLISLSKNYLDEFKLGEDV 382 Query: 411 VD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 D RA LSKADL T++V EF ELQG +G+ YA EN +AIEE KPR ++ Sbjct: 383 SDNLLRAAYLSKADLVTKMVIEFTELQGIMGRIYATNSGENSQVANAIEEAYKPRSSEDS 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + I +S+ADK+DT+ + I +GS+DP+ LRR+ +G+I II +NKID+ L Sbjct: 443 LPKSVAGIVLSIADKIDTIAGLYIIENYVTGSQDPFGLRRSAIGVINIIADNKIDVDLKD 502 Query: 528 FIED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 I+D + ++ FF DRLK L D+ R+D + A+L N+L Sbjct: 503 LIKDALFVYTEKNEISFDYDKTLEKIVEFFIDRLKNMLIDKGYRYDFVNAVLATGETNIL 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 ++++ +K + EF E+ L RI ++ +N E+++EI Q L EK+ Y Sbjct: 563 SVIEKVKSVEEFVEKENSEEILNYFTRINNF--TKDFENTEVNVEILDQGL----EKQYY 616 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +I + ++ + K Y + + + S + + D ++ V+D ++++NRL+LL + Sbjct: 617 DLIENL--DCEKYLSQKLYTKALEEIASTMDLGNEYLDNTMIMVEDEQLKNNRLALLNKL 674 Query: 689 KNIILIVINVQKIV 702 I + N++ +V Sbjct: 675 ATNISRIFNIKDLV 688 >gi|206889181|ref|YP_002249886.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|238064856|sp|B5YJ12|SYGB_THEYD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|206741119|gb|ACI20176.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 679 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 228/728 (31%), Positives = 374/728 (51%), Gaps = 77/728 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EEIPAR A + + E + ++++ Y TP RL L L LS Sbjct: 1 MGKILFEIGAEEIPARFIPLAISQIEENFKKITSEYRIELESIKVYATPRRLTL-LAELS 59 Query: 61 PHSPEKIEERL--GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPK-KGDVYL 110 S + EE+L GP V G K++ F ++ G++ + QIK PK KG+ Sbjct: 60 --SEQASEEKLVWGPPVHVAFDEKGLPKESAYAFAKAQGIE-VDQLQIK--PKGKGNYVC 114 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 AVL K + E+VL I+ + +PK MRW +IRP++ L + Sbjct: 115 AVLSKKGKKTEEVLPEILRNLFYSLNFPKMMRWGE-----GTLRFIRPVRWFLALY---- 165 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ I +++ I N T GHRF + +P+ + +D+Y LE+A V++DPE R+ IL Sbjct: 166 -DDRFISFEIEGIKTENKTQGHRFLSENPLNIDRVDNYEFILEKAFVIVDPEKRKKIILT 224 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A LA V +++ + +L+EE+ LVE+ + SF +YL LPEEL+ +K +Q+ F Sbjct: 225 QAEELAKKVNGKILWNNELIEEVTYLVEFPNSVLCSFSMQYLKLPEELLITVMKDHQRYF 284 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSS 349 EG L N F++VSN +A + I +G RV+ AR EDA +++ D + L NL Sbjct: 285 AIIDNEGKLKNYFVVVSNTKA-ENEENIKKGAERVIKARFEDARFYYEEDLKKGLVNL-- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA-QLIDADV 408 L+ +K +++H K+G+ ++ RI + ++++ +LI Sbjct: 342 ---------LEATK------------GIIYHKKLGSLYDKSLRIIRIAERLSDRLIPEKT 380 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV A KADL + +V EFPELQG +G YA AI EH P+G + + Sbjct: 381 ELVKIAANYCKADLASGVVGEFPELQGIMGGYYAKNAGMPEEVFLAIREHYLPKGFTDEI 440 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--- 525 P+N I +SLADKLD + F+ + E PSG++DP+ LRRA GII I+L+ K + L Sbjct: 441 PSNDIGCIISLADKLDHIATFFYLGEIPSGTEDPFGLRRAANGIISILLKKKYSLSLLET 500 Query: 526 ----SQFIED---QNLILFFHDRLKLYLHDRDIRHDLIEAI-----LRPENDNLLTIVDL 573 +F+++ + + +F R + YL +LI+ I +RP + I Sbjct: 501 VSMIQEFVDEKLKEQISIFIVQRFESYLESTGYDVNLIKTISDFILIRP----VYEIKKR 556 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ ++ F S E+F L+ KR+ I+ EK E++P+ E EK+L+ I Sbjct: 557 LEAVSLFRSKEDFEEFFLAVKRVSNIIKNYEK------FELNPELFSSEEEKKLFNEIEK 610 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + ++ E ++ +++ + + LH + I FFD VLV D +++ NRL+LLQ++ ++ Sbjct: 611 YKENLYEYLNSQQFFEALNYLHKLTPTINNFFDNVLVMDKDEKIKRNRLALLQHLSELLK 670 Query: 694 IVINVQKI 701 V ++ ++ Sbjct: 671 SVADISRL 678 >gi|258545073|ref|ZP_05705307.1| glycyl-tRNA synthetase, beta subunit [Cardiobacterium hominis ATCC 15826] gi|258519693|gb|EEV88552.1| glycyl-tRNA synthetase, beta subunit [Cardiobacterium hominis ATCC 15826] Length = 689 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 210/708 (29%), Positives = 346/708 (48%), Gaps = 61/708 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+P + A+ + L G+ + ++ TP RL ++ L+ Sbjct: 7 LLIEIGVEELPTKAVTTLADAGRDLWAQALANAGLTHGDIEALATPRRLAWRIRDLATRQ 66 Query: 64 PEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ ER GP + A K KA GF S G+ ++ ++ PK G + +P Sbjct: 67 SDQKIERKGPALAAAKDKDGNWSKAALGFAASCGVD-VAALAVEDTPK-GKWLMYYGEQP 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +E +L + +P K MRW S++RP+ S++ + A ++++ Sbjct: 125 GQPLEALLPELFRHVCDNLPIAKRMRWGDHEQ-----SFVRPVLSLVAL-----ADDRVL 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L + G T GHR H P + + S Y DL A ++ R +I A Sbjct: 175 PLAYFGVQAGRETLGHRVHHPQAVAIASATSYEADLRGAHIISSHAARMESIRAQVEAKA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +A+G V LL E+ L EW GSFD++YL +P+E++ T++ NQK F + Sbjct: 235 AALGGVAVIPPALLAEVASLTEWPVAIAGSFDERYLAVPQEVLITTMQDNQKTFAVVGAD 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + FI V+N++++D AA+ +GN +V+ R DA FW++D Sbjct: 295 GKIRPHFIAVANLESADE-AAVRKGNEKVIRPRFADAEFFWQQD---------------- 337 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L L + RL+ VV+ K+G+ + R+ LG+ +A + AD V A Sbjct: 338 ----LKHKLADYLPRLE--HVVYQEKLGSVAAKTRRLEALGRALAPVCGADADNVATAAH 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 +SK+DL TE+V EFPELQG +G+ YA + A++E +PRG +P + + Sbjct: 392 ISKSDLLTEMVMEFPELQGLMGRYYAAAEGYAADIAAALDEQYQPRGAGGALPQTRTGLA 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 +++A+KLDTL+ +AI KP+GSKDPYALRR + +IR+I EN++ +PL+ +++ Sbjct: 452 LAIAEKLDTLVGGFAIGAKPTGSKDPYALRRMAISLIRLITENELALPLAAWLDKSAAQY 511 Query: 531 DQNLILFFH---------DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 D L H +RL + ++ IR + +A+L +D+L+ I I+ L+ F Sbjct: 512 DAALGAPIHVAAVREYILERLDSHYREQGIRSETCQAVLALGSDDLVDIERRIRALDAFA 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S L SAKRI IL KKN E + L AE+ L+ D +++ Sbjct: 572 GSPSATSLLASAKRIRNIL----KKNGERDGAVQTALLQEPAEQALWQAWQDKQPAFEQA 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + Y + L ++ P++ FF V+V DD ++ NRL+LL ++ Sbjct: 628 LVAGDYRAALEQLATLGAPLDAFFTDVMVMSDDPALQQNRLALLTTLQ 675 >gi|261379391|ref|ZP_05983964.1| glycyl-tRNA synthetase, beta subunit [Neisseria subflava NJ9703] gi|284797839|gb|EFC53186.1| glycyl-tRNA synthetase, beta subunit [Neisseria subflava NJ9703] Length = 687 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 216/660 (32%), Positives = 342/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 INDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + E I+++ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HGLIVLHGGE-----IVNVSVLGLQSGNQTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI + A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALNEQAGRLKATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERATRLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D + F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTTFDSFPKGLLNEKTPSETVDFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|294787911|ref|ZP_06753155.1| glycyl-tRNA synthetase, beta subunit [Simonsiella muelleri ATCC 29453] gi|294484204|gb|EFG31887.1| glycyl-tRNA synthetase, beta subunit [Simonsiella muelleri ATCC 29453] Length = 680 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 215/651 (33%), Positives = 348/651 (53%), Gaps = 56/651 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKK 105 Y +P RL + ++ + ++ + GP V A +KAI+GF RS G++ S +I D K+ Sbjct: 49 YASPRRLAVQVQNVKAEQADQHIVKKGPAVTANEKAIEGFARSCGVEKGS-LKIINDGKQ 107 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW-STTHSPISAFSWIRPLKSILC 164 DVY + + + D+L IV A++K+P PK MRW S+TH+ ++RP+ ++ Sbjct: 108 -DVYAHEFTQTGQKLADLLGDIVNAAVKKLPIPKVMRWGSSTHT------FVRPVHGLVV 160 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPEC 223 + A+ ++ + + + + T GHRF + +K D Y + L E+ V+ Sbjct: 161 MHGAD-----VLPVSVLGLASRHFTLGHRFLSQGEVKFIQADDYAKQLAEQGKVIASFAE 215 Query: 224 RRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 R+NAI + A+++ + D+ LL+E+ LVE+ V +F++ +L +P+E + LT+ Sbjct: 216 RKNAIQAALNEQANSLNATVAADESLLDEVTALVEYPVVLQAAFEEHFLAVPQECLILTM 275 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + NQK F + G L N F+LVSN+Q +D + I+ GN RV+ ARL DA F+K+DQ Sbjct: 276 QQNQKYFPLLDKNGKLMNRFLLVSNLQTNDP-SHIISGNERVLRARLSDAEFFYKQDQK- 333 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 L+ R+ +L VV+H KIG+Q ERV R++ + IA Sbjct: 334 -------------------ATLESRLPKLQ--SVVYHNKIGSQAERVERLQTIAAHIAGY 372 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD A +RA L+KADL TE+V EFPELQG +GK YA L E AIE+H +PR Sbjct: 373 LKADKAAAERAARLAKADLVTEMVGEFPELQGTMGKYYAQLDGEQPEIALAIEQHYQPRF 432 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P N+I V+LADKL+TL+ W I P+G KDPYALRR+ LG++R+++ + + I Sbjct: 433 AGDALPENRIGTAVALADKLETLVGIWGIGLIPTGDKDPYALRRSALGVLRMLMNDSLSI 492 Query: 524 -PLSQFIED--------QNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L F+ D +N + F RL + L + D D++ A+L D L + Sbjct: 493 NELLTFVFDSFPKDLLSENTVSEVADFMQARLAVLLQN-DYPQDVVAAVLAQRPDRLNDL 551 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ + +F + + KR+ +L KK+ + E++P L + EK L+A Sbjct: 552 QAKLQAVKQFKQLPESVALAAANKRVQNLL----KKSDDALGEVNPSLLAQDEEKALFAA 607 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + +Q ++ + + L +I ++ FFD V+V VDD V+ NR Sbjct: 608 VQALQPKVQTALSTQNFQAALSELATIKPQVDAFFDGVMVMVDDVAVKQNR 658 >gi|332364608|gb|EGJ42377.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1059] Length = 679 Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 220/718 (30%), Positives = 362/718 (50%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQFVITSPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 SEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FFH R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYDNQEAVLDFFHARVE-KMMDRSIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + + I+P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--INPALFENQEEKDLAAAIES 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD ++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLAANL-------------DQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|315125117|ref|YP_004067120.1| glycyl-tRNA synthetase subunit beta [Pseudoalteromonas sp. SM9913] gi|315013630|gb|ADT66968.1| glycyl-tRNA synthetase subunit beta [Pseudoalteromonas sp. SM9913] Length = 689 Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 215/718 (29%), Positives = 342/718 (47%), Gaps = 60/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L +K L Sbjct: 5 NLLVEIGTEELPPKSLRKLAEAFAANLTAELESLELAHQGVSWYASPRRLGLQVKALDAK 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP + A KA G+ R G++ + D Q + KG L + + Sbjct: 65 QQDKEVEKRGPAIKAAFDAEGNPTKAAMGWARGCGIE-VKDAQTL-ETDKGAWLLHIAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ K+P PK MRW + +IRP+ ++ +L +E + Sbjct: 123 AGQETKLLMADAISKALAKLPIPKPMRWGANKT-----QFIRPVHTVTILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 173 IEGEILGKQVSNQLQGHRFHHPEKISINHADDVFDVLKSAYVIADYEQRKAQIRAQIEDA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A AV + D+DLLEE+ LVEW +F++ +L +P E + T+K +QK F + Sbjct: 233 AKAVNAVVAMDEDLLEEVTSLVEWPVTLTATFEEAFLDVPAEALIYTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F+ VSNI++ D + ++ GN +VV RL DA F Sbjct: 293 NGKLLNKFLFVSNIESKDP-SVVISGNEKVVRPRLADAQFF------------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F D K L+ R+ LD V+F ++GT ++ RI L IA+ + AD AL RA Sbjct: 333 -FETDKKKTLESRLESLD--SVLFQKQLGTLKDKSQRISELAGYIAEQLGADKALAARAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EF ++QG +G YA E A E PR +N+PT+ IS Sbjct: 390 LLSKTDLMTEMVMEFTDVQGVMGMHYARHDGEAEDVAVAQNEQYMPRFAGDNLPTSLISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + + + + Sbjct: 450 AVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKQLPLDILDLVAKSQTL 509 Query: 536 L---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F R + + D I D+I+A+L + +K ++ F Sbjct: 510 FGEKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKAVSHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E + KR+ ILA K N ++ L +AEK L + ++ F T + Sbjct: 570 RTLDAAESLAAANKRVSNILA---KNNITTQGDVDQSLLSDDAEKVLASQVAKFATDLAP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + L I + ++ FFD V+V DD V+ NRL+LL + + L + ++ Sbjct: 627 LYSDGNYQEALSQLAGIRDSVDNFFDNVMVMADDEAVKQNRLALLSQLSGLFLEIADI 684 >gi|149927715|ref|ZP_01915967.1| glycyl-tRNA synthetase subunit beta [Limnobacter sp. MED105] gi|149823541|gb|EDM82771.1| glycyl-tRNA synthetase subunit beta [Limnobacter sp. MED105] Length = 694 Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 223/728 (30%), Positives = 362/728 (49%), Gaps = 68/728 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + + +L L++EG + N + + +P RL + ++ Sbjct: 5 LLVELFTEELPPKALQTLGNAFAELLSKTLRDEGHLADNSAVEAFASPRRLACRITNVAA 64 Query: 62 HSPEK-IEERLGP-RVGAGKKA-----IDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVL 113 SPEK I+ERL P ++G + L S GL I+ Q++ K DV Sbjct: 65 VSPEKKIQERLLPVKIGLDANGQPTPPLQKKLDSLGLGAIAVDQLETISDGKQDVLHISR 124 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +ED L + A K+P PK M + S ++RP ++C+ + Sbjct: 125 TQAGKALEDSLTKALDTATTKLPIPKVMSYQRPDG--STVHFVRPAHRLVCL-----HGD 177 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 K++ + + IT GHRF + + + S D Y LE E V+ R+ AI+ Sbjct: 178 KVVPAQVLGLESDRITLGHRFLSQGVLNIASADSYETQLETEGKVIASFTKRKAAIVKSL 237 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A G ++V+ +DL++E+ LVEW V+ F+K++L +P+E + LT++ NQK F Sbjct: 238 AE--QAAGDKVVQPEDLIDEVCALVEWPVVYEAGFEKEFLEVPQECLILTMQANQKYFAI 295 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G + N F+LVSN+ S I GN RV+ ARL DA F+ +D+ Sbjct: 296 TDQNGKMKNRFLLVSNLLTSTP-QLITTGNERVLRARLADAKFFFDQDRK---------- 344 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 K L+ R+ L +VV+H K+GTQ +R R+ L +A L ADV L Sbjct: 345 ----------KTLESRLPGL--ANVVYHNKLGTQKDRNGRLVELAAALAPLCGADVELAK 392 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +L KADL T++V EFPELQG +G+ YA E+ AI +H PR + +P N Sbjct: 393 RAALLCKADLLTDMVGEFPELQGNMGEHYAHHDGEHADVAQAIADHYSPRFAGDQLPRNP 452 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE-----------NKI 521 + + +LADKL+T++ + I P+G KDP+ALRR LG+IR+++E NK Sbjct: 453 VGLAAALADKLETMVGIYGIGLIPTGDKDPFALRRHALGVIRMVIEKNLKLDLIDALNKA 512 Query: 522 DIPLSQFIE----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 S F + + L F DRL+ YL D+ +E++L + N DL K L Sbjct: 513 SSLFSAFPDFKQSVEGLAGFIQDRLRGYLKDQGYTTAEVESVL---SQNPSQFADLPKRL 569 Query: 578 NEF--FSSAKGEKFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 FS + L +A KRI IL KK S ++ L ++AEK L A + + Sbjct: 570 EAVRAFSQLPESQALAAANKRITNIL----KKTEVGSSDVDASLLQVDAEKALAAQVKEV 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 H + + Y Q +L + ++ FF+ V+V ++ +++NRL+LL+++ ++ Sbjct: 626 EPHATRAFEQGDYQQALLVLAPLKANVDAFFENVMVMDNNEALKNNRLALLKHMHGLMNR 685 Query: 695 VINVQKIV 702 V ++ ++ Sbjct: 686 VADISQLA 693 >gi|88813030|ref|ZP_01128272.1| Glycine--tRNA ligase [Nitrococcus mobilis Nb-231] gi|88789663|gb|EAR20788.1| Glycine--tRNA ligase [Nitrococcus mobilis Nb-231] Length = 702 Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 219/728 (30%), Positives = 361/728 (49%), Gaps = 71/728 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + + E + +I L + + + + R + TP RL + ++G++ Sbjct: 7 DLLVELGTEELPPKGLRRLMESFASQVIAGLDQAELSHADHRCFATPRRLAVLVRGVALQ 66 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL-R 114 P + ER GP G +A GF RS G++ C+++ KG V+L Sbjct: 67 QPTRQIERKGPAWSVAYDAAGQPTQAALGFARSCGVEIEQLCRLET--TKG-VWLGYRGT 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P R ++L I+ A+ ++P K MRW S ++RP+ ++ +L E+ Sbjct: 124 EPGRTAAELLPEIIVQALARLPIAKRMRWGD-----SPAEFVRPVHWLILML-----GEE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKV-QSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I L + GN + GHR H P PI + + L++ R EE V+ D E RR IL Sbjct: 174 VIPATLLDTVSGNFSRGHRIHHPQPIALREPLEYSDRLHEEGCVIADFEARRERILAQVT 233 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A A+G + + D LL+E+ LVEW G+FD+ +L +P E + +++ +QK F R Sbjct: 234 HCAEALGAQALWDDALLDEVTALVEWPVALAGTFDETFLRVPPEALISSMQGHQKYFPLR 293 Query: 294 TRE--GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++ G+LA FI V+N+++ D A ++ GN RV+ RL DA FW +D+ Sbjct: 294 SKADTGLLAR-FITVANLKSQDP-AQVIAGNERVIRPRLADAAFFWDQDRR--------- 342 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL +R+ +L V+F ++G+ ++ +RI LG+ A + Sbjct: 343 -----------RPLAERIPQLK--HVLFQKQLGSLYDKSARIGALGRHFAADFGVTGDQI 389 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +R LSK DL TE+V EFPELQG +G+ YA E + A++E +PR + + + Sbjct: 390 ERVAWLSKTDLLTEMVGEFPELQGVMGRYYAAHDGEEEAIALALDEGYRPRFAGDPIAAS 449 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++A++ DTLI +A+ + P+G+KDP+ALRRA LG++R +E + I L Sbjct: 450 PLGQLLAVAERADTLIGIFALGKTPTGAKDPFALRRAALGLLRTCIEGQRSIDLEALFRL 509 Query: 530 -------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD---- 572 + Q ++ F DRL+ +R+ +L EA+ R IVD Sbjct: 510 AAELMPAEVDAARQIQPVLQFCLDRLRGLYLERNYPGELFEAV-RTLTQQKHLIVDPWDF 568 Query: 573 --LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + EF + S KRI IL ++ S + P++L E+RLY Sbjct: 569 HRRVMACAEFIQLPEATSLAASNKRIHNILRHAGADDQPFS-PVDPEHLEHPEERRLYEA 627 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ I+ ++ Y L + EPI+ FFD VLV D+ VR NRL+LL + Sbjct: 628 VNALAGEIESQVNAGEYTAALRHLAILREPIDRFFDTVLVMADEPSVRINRLALLACVSQ 687 Query: 691 IILIVINV 698 + L V +V Sbjct: 688 LFLSVADV 695 >gi|328945067|gb|EGG39223.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1087] Length = 679 Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 221/715 (30%), Positives = 365/715 (51%), Gaps = 90/715 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + G L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGGFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DL+ +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLNFLDIKSGRTSRGHRFLGKE-TEIASADSYEDDLRAQFVIASPLERGDMIVEQIQA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNL-DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD-VAL 410 K + DL + L+ +V FH KIG+ E + R + +AQ +DAD A Sbjct: 335 -KLAIADLVEKLN---------NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAVAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q + Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 530 ------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++Q +L FF R++ + DR I D++ A+L+ N + DL++ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRSIPKDIVTAVLQSTN---FVVRDLVET 560 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI----- 631 A+ + F + + + ++ + EK + + ++P + EK L A I Sbjct: 561 AALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLAAAIEAVEL 618 Query: 632 -SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD T++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 619 TSDLATNL-------------DQLFALSPIIDAFFDHTMVMAEDETVRNNRLALL 660 >gi|212696011|ref|ZP_03304139.1| hypothetical protein ANHYDRO_00547 [Anaerococcus hydrogenalis DSM 7454] gi|212676998|gb|EEB36605.1| hypothetical protein ANHYDRO_00547 [Anaerococcus hydrogenalis DSM 7454] Length = 689 Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 222/734 (30%), Positives = 368/734 (50%), Gaps = 78/734 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE P+ + + L L++E + + ++ TP R + L GL Sbjct: 1 MSKYLLEIGVEEFPSAYINSTKKQLEEKFKKLIEENKLSLEEIKVESTPRRFAILLDGLE 60 Query: 61 PHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E++ GP G KA+ GFLR ISD IK KG+ Y+ V Sbjct: 61 ENKSEELVSVKGPSKKIAYDNEGNPSKALLGFLRGQKAD-ISDVIIK--DFKGEEYVYVE 117 Query: 114 RKPKR-LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K + I++VL+ + ++ + +P+SMRW + + RP++ L +L Sbjct: 118 KKEESPSIKEVLQKNIYELVKSLNFPRSMRWGG-----RSIRFARPIRYFLSLL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+D D + I N T GHR I V +D Y+ L+E V+L + RR IL Sbjct: 168 DEILDFDAEGIKVSNTTKGHRVLGKSEIVVDKIDSYLDLLKENFVILSYKERREIILRGL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +R A +G + ++D+DLLEE+I +VE+ V MG D +YL LP+E+I +K +Q+ F Sbjct: 228 NRYAKEIGGKFLKDEDLLEEVINIVEYPTVLMGELDHEYLKLPKEVIITPMKDHQRYFPI 287 Query: 293 RTREGVLANCFILVSNIQASDGGAA--IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 L F+LV N D A ++ GN +V+ ARLEDA F+ D N Sbjct: 288 VDDNENLMPYFLLVRN---GDDYAKENVISGNKKVLTARLEDAKFFYDIDNN-------- 336 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L++ + +LD L F +G+ ++ R+ L K + + Sbjct: 337 ------------KKLEEYVDQLDRL--TFFEGLGSMKQKTERLISLSKNYLEEFKLGEDV 382 Query: 411 VD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 D RA LSKADL T++V EF ELQG +G+ YA ENI +AIEE KPR ++ Sbjct: 383 SDNLLRAAYLSKADLVTKMVIEFTELQGTMGRIYATNSGENIQVANAIEEAYKPRSSEDS 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + I +S+ADK+DT+ + I + +GS+DP+ LRR+ +G+I II + KID+ + Sbjct: 443 LPKSVAGIVLSIADKIDTITGHYIIEDYVTGSQDPFGLRRSAIGVINIIADKKIDVDIKD 502 Query: 528 FIED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 ++D + + FF DRLK ++D+ R+DL+ A+L N+L Sbjct: 503 LVKDSLFVYTEKNELSFDYNQTLEKITEFFIDRLKNMMNDKGYRYDLVNAVLNTGESNVL 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 ++++ +K L EF E+ L RI K+ ++ ++++ + L E++ Y Sbjct: 563 SVIEKVKALEEFVKRDDSEEILNYFTRINNFT-----KDFDL-IDVNVEKLDEGLERQYY 616 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 I++ + ++ + K Y + + + S + + D ++ VDD E+++NRL+LL + Sbjct: 617 DCINNLES--EKYLSQKLYQKALEEIASTRQIGNDYLDNTMIMVDDEEIKNNRLALLNKL 674 Query: 689 KNIILIVINVQKIV 702 I V N++ +V Sbjct: 675 AKDISRVFNIKDLV 688 >gi|110832869|ref|YP_691728.1| glycyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|110645980|emb|CAL15456.1| glycyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 690 Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 216/722 (29%), Positives = 354/722 (49%), Gaps = 66/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + + L+ + L E G+ + + ++ P RL L ++ L Sbjct: 4 DLLIELGTEELPPKALASLSAALTDEFVRQLDEAGLNHGAVERFAAPRRLALLVRDLDEK 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ ER GP V A KA GF S GL D ++D KG+ +A + + Sbjct: 64 QADRDIERQGPAVQAAFDSDGNPTKAAQGFAASLGLTV--DQLGRQDTGKGERLVAQITE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ +IQK+P PK MRW ++RP ++ + +++ Sbjct: 122 QGKSAAELIPAFFTQSIQKLPIPKRMRWGKRK-----VQFVRPAHWLVALF-----GDEV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I +L ++ G +YGHRFHAP I++ S Y + +E +L RR A++ + Sbjct: 172 IPFELLDLQSGRTSYGHRFHAPGAIELASASEYAQRIENDGHVLADFDRRKAMIKEQTLA 231 Query: 236 AS--AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A A G+ + + DLL E+ LVEW + MGSFD +L +P+E + ++ +QK F Sbjct: 232 AGKEAGGVAQI-NPDLLNEVTALVEWPEALMGSFDDDFLRVPQEALISAMEEHQKYFSVL 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI +SNIQ+ D ++ GN +V+ RL DA F+ D Sbjct: 291 DNDGKLMPRFITISNIQSKDP-QQVIHGNEKVIRPRLADAAFFYDND------------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 + L Q L +VVF ++GT E+ RI L IA+ I DV Sbjct: 337 -------CKRTLAQHAEGL--TNVVFQQQLGTVAEKCERIGGLAAVIAENIGGDVDNAKL 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A LSKADL +E+V EF +QG +G A + + +A+ E PR + +P +K Sbjct: 388 AGKLSKADLNSEMVGEFDTMQGIMGFYLAQREGQPKEVANALYEQYLPRFAGDTLPQSKT 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + VSLADK+DTL+ + I +KPSG+KDPYALRRATLG++RII+E+++ + L + ++ Sbjct: 448 GMAVSLADKIDTLVGIFGIGQKPSGTKDPYALRRATLGVLRIIIEHELALDLRELLDKAA 507 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL---IKH 576 + F R + ++ I +I ++L +D +D +K Sbjct: 508 EQLGERIDTAQVDDAFEFIKGRYRAIYQEQGIATPVILSVLAI-DDACRKPLDFDRRVKA 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + + KR+ ILA E E EI L EAEK L ++ Sbjct: 567 VAAFQQRDEAQALAAANKRVSNILAKLETAPAE---EIDGALLEDEAEKTLTNMVVAAFE 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 E ++ Y + ++L + EP++ FFD V+V +D VR+NRL+LL +++++ L V Sbjct: 624 QTYELLEAGDYASVLEMLAQLREPVDTFFDTVMVMAEDEAVRNNRLALLAFLRDLFLNVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|94502179|ref|ZP_01308676.1| Glycyl-tRNA synthetase, beta subunit [Oceanobacter sp. RED65] gi|94425682|gb|EAT10693.1| Glycyl-tRNA synthetase, beta subunit [Oceanobacter sp. RED65] Length = 689 Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 216/721 (29%), Positives = 340/721 (47%), Gaps = 64/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+EI +EE+P + + L+ +G+ + N + P RL + L GLS Sbjct: 5 DFLVEIGTEELPPTALKSLRDAFQKGIETFLQAKGLSFANSEAFAAPRRLAVRLTGLSAQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E+ GP V G KA +GF RS G+ + D K +Y A Sbjct: 65 GESSKSEKFGPYVNVAIGDDGKPTKAAEGFARSNGV-NFEELDRITDEKGERLYFAT-EV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P D L + ++ K+P PK MRW + + ++RP+ +L +L K Sbjct: 123 PGAKAVDELPNAIRDSLNKLPIPKRMRWGASRT-----EFVRPVHWVLTLL-----DNKS 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ D+ + T GHRFHA I + S Y L E+ VL + + R+ I Sbjct: 173 IEADILGVKTNYFTRGHRFHANKEITITSPSAYEATLKEQGKVLANYDERKEMIRQQVLA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + V D+DLL+E+ L EW G+FDK++L +P E + ++K +QK F Sbjct: 233 EAEKLGGQAVIDEDLLDEVASLNEWPTALSGNFDKEFLQVPAEALVSSMKEHQKYFHVLD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI + NI++ D +++GN RV+ RL DA FW Sbjct: 293 KDGKLMPNFITICNIESKDP-QQVIEGNERVIRPRLADAKFFW----------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + DL PLD R +LD V + ++G+ ++ R+ VL KIA I D +RA Sbjct: 335 ---DTDLKTPLDSRFEKLD--SVRWVQQLGSLKDKSERLMVLASKIATAIGGDAEKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L K DL +E+V EF +LQG G+ YA E+ C A+EE P + +P + Sbjct: 390 AKLCKTDLLSEMVLEFSDLQGLAGRYYAQHDGEDPDVCAAMEEQYMPAFAGDALPQTQTG 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---D 531 + ++LAD+LD+L+ + I + P+G KDP+ALRRA+LG++R+I+EN + + L++ I+ D Sbjct: 450 LALALADRLDSLVGLFGIGQIPTGGKDPFALRRASLGVLRLIVENNLKLDLNELIDWAMD 509 Query: 532 QN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 N LI + DR + D +I + +A+ I + ++ Sbjct: 510 NNWPCDLDADNKSKLIDYMLDRFSAWYQDENIPSVVFQAVRAKGITQPYDINQRVMAVHA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISPQYLLLEAEKRLYAVISDFGTH 637 F E + KR+ IL+ KN + ++ L AEK L + Sbjct: 570 FSQLESAEALAAANKRVSNILS----KNDAFMDNAKVDNNLLSDAAEKALAESLDKQMQS 625 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + Y Q L + + I+ FFD+V+V DD V+ NRLSLL ++N+ L V + Sbjct: 626 ATPLFEKGEYAQYLTQLTELRQSIDTFFDEVMVMADDEAVKQNRLSLLNQLRNLFLNVAD 685 Query: 698 V 698 + Sbjct: 686 I 686 >gi|226942180|ref|YP_002797253.1| glycyl-tRNA synthetase subunit beta [Azotobacter vinelandii DJ] gi|259511919|sp|C1DFV1|SYGB_AZOVD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226717107|gb|ACO76278.1| Glycyl-tRNA synthetase protein, beta subunit [Azotobacter vinelandii DJ] Length = 685 Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 225/725 (31%), Positives = 347/725 (47%), Gaps = 78/725 (10%) Query: 3 DFLLEIYSEEIPAR-MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ SEE+P + ++ A L+ I GL G+ Y+ R Y P RL + ++ L Sbjct: 5 DFLVELGSEELPPKALKSLATAFLAGIEKGL-AAAGLEYRVARFYAAPRRLAVLVEHLVA 63 Query: 62 HSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ GP V A +A GF R G++ + D A LR Sbjct: 64 QQPDRTLNLDGPPVAAAFDAEGNPTQAALGFARKCGVEL----------HEIDSSGAKLR 113 Query: 115 K----PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 P + +L IV ++ ++P PK MRW T ++RP + ++ + Sbjct: 114 YSRHIPGQPASALLPAIVQASLDELPIPKRMRWGTRKE-----EFVRPSQWLVMLF---- 164 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +++D ++ G + GHRFH P +++ Y+ DL A VL D RR I Sbjct: 165 -GNQVVDCEILAQKAGRESMGHRFHHPDAVRISQPSSYLEDLRSAYVLADFAERRELIAG 223 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA+ V +DLL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 224 RVADLAAQQQGSAVVPEDLLDEVTALVEWPVPLVCSFEERFLTVPQEALISTMQDNQKYF 283 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L CFI V+NI++ D A IV GN +VV RL DA F Sbjct: 284 CLLDANGKLLPCFITVANIESRDP-AQIVAGNEKVVRPRLTDAEFF-------------- 328 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 FN D +PL+ RL VVF A++G+ E+ R+ L IA+ I D Sbjct: 329 ------FNQDKRQPLESFNQRL--ASVVFQAQLGSVLEKAERVSRLAGFIAERIGGDPQH 380 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSKADL +E+V EFPELQG G YA+ E A++E PRG +P+ Sbjct: 381 AIRAGLLSKADLASEMVGEFPELQGIAGYHYALNAGEPEDIARALDEQYMPRGAGAQLPS 440 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL---SQ 527 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E ++D+ L S Sbjct: 441 TLTGAAVAMADKLDTLVGIFGIGMPPTGSKDPYALRRAALGILRILIEKQLDLNLEEASH 500 Query: 528 FIEDQ------------NLILFFHDRLKLYLHDR--DIRHDLIEAILRPENDNLLTIVDL 573 F Q + F DRL+ D D+ L L+P + L + Sbjct: 501 FAVAQYGTKVKASGLAEQVSEFVFDRLRARYEDEGIDVSSYLAVRALQPASAYDLDL--R 558 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + E KR+ +L E K + I +Y +E LY+ + Sbjct: 559 VQAVQAFRRLPEAEALAAVNKRVSNLLGKYEGK---LPAAIEARYFDNASEFSLYSALQQ 615 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ +RY + + L S+ +P++ +F+ VLVN +D +R NR ++L ++ + L Sbjct: 616 AQHAVRPLAAERRYREALERLASLRDPVDAYFEAVLVNAEDPAIRANRHAMLAQLRGLFL 675 Query: 694 IVINV 698 V ++ Sbjct: 676 CVADI 680 >gi|290953410|ref|ZP_06558031.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica URFT1] gi|295313371|ref|ZP_06803980.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica URFT1] Length = 620 Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 187/623 (30%), Positives = 328/623 (52%), Gaps = 59/623 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P K MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A +A Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENIA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF + Sbjct: 235 KENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDNQ 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNIQ S + GN +V+ ARL DA F Sbjct: 295 GDLVANFITISNIQ-SKKPELVTSGNQKVMNARLADAAFF-------------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 ++ DL L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA + Sbjct: 334 YDTDLKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAGL 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 392 LAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAAC 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 452 VALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLESY 511 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 512 KKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAVT 571 Query: 579 EFFSSAKGEKFLLSAKRIFQILA 601 +F++S K + + S KR+ I++ Sbjct: 572 KFYNSDKAQSLIASNKRVANIIS 594 >gi|146305055|ref|YP_001185520.1| glycyl-tRNA synthetase subunit beta [Pseudomonas mendocina ymp] gi|166227919|sp|A4XN72|SYGB_PSEMY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145573256|gb|ABP82788.1| glycyl-tRNA synthetase beta chain [Pseudomonas mendocina ymp] Length = 684 Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 215/715 (30%), Positives = 345/715 (48%), Gaps = 58/715 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + + LK G+ Y R Y P RL + ++ L Sbjct: 5 DFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLNYAASRVYAAPRRLAVLVEQLEEQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK----PKR 118 ++ GP + A A DG L C + D + D A LR P + Sbjct: 65 QADRSMNLDGPPIQAAFDA-DGNPTQAALGFARKCGV--DIAEIDRSGAKLRFAQHIPGQ 121 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 ++L TIV ++ +P PK MRW+ ++RP + ++ + + ++D Sbjct: 122 PAVNLLPTIVQDSLNDLPIPKRMRWAARRD-----EFVRPTQWLVMLF-----GDAVVDC 171 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 ++ G ++ GHRFHA +++ S +Y DL A VL D RR I LA+A Sbjct: 172 EILAQKAGRVSRGHRFHANREVRISSPANYAEDLRSAYVLADFAERREIISRRVDELAAA 231 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 + LL+E+ LVEW + SF++++L +P+E + T++ NQK F G Sbjct: 232 EQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFCLLDAGGK 291 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+NI++ D A IV GN +VV RL DA F+K+D+ K+ FN Sbjct: 292 LLPRFITVANIESKDP-AQIVSGNEKVVRPRLTDAEFFFKQDK---------KQKLEGFN 341 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 QR+A +VVF A++G+ ++ R+ L IA+ + D A RA +LS Sbjct: 342 --------QRLA-----NVVFQAQLGSVFDKAQRVSALAGFIAREVGGDEARAARAGLLS 388 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL TE+V EFPE+QG G YA+ E A+ E PRG +P+ V+ Sbjct: 389 KCDLATEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPSTLTGAAVA 448 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 +ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E +D+ L+ ++ Sbjct: 449 VADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDFAVAQYAG 508 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++ F DRL+ D I + +A+ + L ++ + F Sbjct: 509 KVKSDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQAVQAFRKL 568 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KR+ +L+ K ++ ++ Y +E L+A I +Q Sbjct: 569 PQAEALAAANKRVSNLLS---KAEGGVAAQVEAHYFDNPSEFALHAAIQQADQAVQPLAA 625 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y++ L S+ EP++ FF+ VLVN +D VR NR +LL ++ + L V ++ Sbjct: 626 ARQYNEALAKLASLREPVDAFFEAVLVNAEDARVRANRYALLARLRGLFLGVADI 680 >gi|190151158|ref|YP_001969683.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264507|ref|ZP_07546092.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692361|sp|B3GZ55|SYGB_ACTP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189916289|gb|ACE62541.1| Glycyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870204|gb|EFN01963.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 688 Score = 299 bits (766), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 213/720 (29%), Positives = 352/720 (48%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 172 LIEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D AI++GN +VV RL DA F+K Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFFFK--------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +R Sbjct: 336 -----TDLKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSA 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 ALFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K + I E++P + AEK L + T + Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KADVAIG-EVNPTACVEPAEKALAEAVLGLRTEV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + Y + D L S+ +P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 625 QPLIAKGEYTAVLDKLASLRQPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADI 684 >gi|261378163|ref|ZP_05982736.1| glycyl-tRNA synthetase, beta subunit [Neisseria cinerea ATCC 14685] gi|269145627|gb|EEZ72045.1| glycyl-tRNA synthetase, beta subunit [Neisseria cinerea ATCC 14685] Length = 687 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 215/662 (32%), Positives = 344/662 (51%), Gaps = 64/662 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 S++ + + I+++ + + GN T GHRF + I +++ D Y + E+ V Sbjct: 163 HSLIVLHGGD-----IVNVSVLGLQSGNKTLGHRFLSNGEIAIENADSYAAQMREQGKVE 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI + A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ALFAERKAAIQTALNEQAGRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A DRA L+KADL TE+V EFPELQG +GK YA L E AIE+H Sbjct: 375 HIAKALGADAAAADRAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAKAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPDGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDIPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +D+ ++ I+ F RL + L + D D++ A+L + Sbjct: 495 YGLDV--NELIQTSFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQ 551 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + + KR+ +L +K + E+ E++ L + Sbjct: 552 PRRLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL---KKADAELG-EVNESLLQQDE 607 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+ Sbjct: 608 EKALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDPAVKQNRLN 667 Query: 684 LL 685 LL Sbjct: 668 LL 669 >gi|324991739|gb|EGC23671.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK353] Length = 679 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 221/718 (30%), Positives = 361/718 (50%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L E + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTEHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDAGGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTDFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 SEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + E+Q +L FF R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLARLYELKFDSLSYENQEAVLDFFRARIE-KMMDRSIPKDIVTAVLQSNN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + + I+P + EK L I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--INPSLFENQEEKDLATAIEA 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD T++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLATNL-------------DQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|302036970|ref|YP_003797292.1| glycyl-tRNA synthetase subunit beta [Candidatus Nitrospira defluvii] gi|300605034|emb|CBK41367.1| Glycyl-tRNA synthetase, beta subunit [Candidatus Nitrospira defluvii] Length = 724 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 214/739 (28%), Positives = 365/739 (49%), Gaps = 78/739 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EE+P + A L LLK+ + Y +R TP RL L ++GL+ Sbjct: 21 ELLLEIGTEELPYQFVAPAMRALQQSTETLLKDLRLTYGAVRTMGTPRRLVLLIEGLARQ 80 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++E +GP + G +A GF G+ + D Q+++ PK G+ AV ++ Sbjct: 81 QASAVKEAMGPSKSVAFDQNGQPTRAAVGFAAGQGI-PVEDLQVRQTPK-GEYLFAVKQE 138 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + VL +P + K+ +PK+M W+ T + RP++ ++ + K+ Sbjct: 139 KGQAVAAVLIQALPQLLGKLSFPKAMHWNQT-----GVRFARPVRWLVALCGG-----KV 188 Query: 176 IDLDLKEIPCGNITYGHRF-----HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 + + I GN+++GHR +P V+S+ HY+++ E V++D E RR IL+ Sbjct: 189 LPIQFATIKAGNLSHGHRVLGAKVSSPKGFAVKSIAHYLKETERHGVIVDQERRRTMILD 248 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA + L +D DLLE+ + +VE +GSF YL LP+E++ ++K +Q F Sbjct: 249 QLASLAKSARGHLHQDDDLLEQAVYMVESPLTILGSFKPHYLSLPKEILMTSMKEHQGYF 308 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L F+ V+N++ S+ I +GN RV+AARL DA F+ D+ Sbjct: 309 SLVDQKGALLPNFLAVTNMKLSNM-QLIREGNERVLAARLADAKFFFDEDRKT------- 360 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L R+A+ L V FH K+G+ ++ R+ + +A + + + Sbjct: 361 -------------SLIDRVAK--QLAVTFHQKLGSLHQKTQRVVAMAAHVAGQLGDERLV 405 Query: 411 VD--RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 D RA LSKADL T IV EFP LQG +G EYA E+ AI E PR + Sbjct: 406 QDCRRAAELSKADLLTGIVGEFPTLQGLMGGEYAKHDGESPVVSAAIREQYMPRAMEGEL 465 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +SLAD+LD++ F+ + PSGS+DP+ALRR I+RI++E+K+ + L+Q Sbjct: 466 PESLAGKVLSLADRLDSIAGFFLVGLVPSGSEDPFALRRHATAIVRIVIESKLRLNLAQA 525 Query: 529 I-------EDQN--------------LILFFHDRLKLYLHD-RDIRHDLIEAILRPENDN 566 + QN +I F +R++ Y +R D++EA+L+ + Sbjct: 526 VRAAQDVLSGQNVAAAPQSGKAGAPDVIGFLFERVRFYGKSAHQLRDDVMEAVLKSADRQ 585 Query: 567 LLTIVDL---IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 + + DL +K L + A+ + ++ KR ++ E+ + + + + A Sbjct: 586 TIDLTDLFDKMKALQQITVRAEFDPLIVGFKRAHRLTEKEQWDRKPVESGLFRE----AA 641 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + +M +Y + D+L + PI+ FF+ V+VN +D VR NRLS Sbjct: 642 EPALHQTVQSSHQEYAAAMGGGKYGEALDVLVRMKGPIDDFFNAVMVNAEDPAVRGNRLS 701 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ + ++ + + +I+ Sbjct: 702 LLKSVDDLFMSFADFSQIM 720 >gi|58584628|ref|YP_198201.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418944|gb|AAW70959.1| Glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 702 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 233/733 (31%), Positives = 367/733 (50%), Gaps = 90/733 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L E SEEIP+RMQ+ AA + + + V + ++ + T R+ L++ +S Sbjct: 5 LLFECLSEEIPSRMQNSAAAQVKNYITNAFNKNNVKFASIEVFITARRITLFVDNISISG 64 Query: 64 PEKIEERL-GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPK------KGDVYLAVLRKP 116 + + + GP V A K AI+GFLR ++ +D ++K K DVY Sbjct: 65 LKGSNDEIKGPNVNASKSAIEGFLRKNK-KSETDLLVRKVNNVDFYYLKKDVY------- 116 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 I++ LK+ + ++ WPKSMRWS W+RP+K+ILC L E II Sbjct: 117 SFNIKEFLKSQLEEMLKNFSWPKSMRWSERKE-----RWVRPIKNILCTLNNE-----II 166 Query: 177 DLDLKEIPCGNITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + I NITYGHRF + + V++ Y LE+ V+L P R+ IL+ ++ Sbjct: 167 PISFAGITVCNITYGHRFLSSGTALTVKTPKDYFELLEKNNVILQPGKRKQFILDQINKF 226 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDK-KYLCLPEELIRLTIKTNQKCFVTRT 294 L+L ++ LL E+ GL+EW V G ++ K L LP+E+I I T QK Sbjct: 227 TKEQNLQLEKNDYLLNELTGLIEWPIVLFGEVNQEKLLGLPKEVILSIINTQQKYLALSN 286 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + + + FI V N+ +V+G++R++ ARL DA +D+ KE+ Sbjct: 287 GQKI--SHFITVVNVNN----DEVVKGHARILEARLADAQFLISQDK---------KEN- 330 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDR 413 LD + +LD ++FHA +G+ GE+V RI L K IA + + + R Sbjct: 331 ----------LDYYVKKLD--SILFHASLGSVGEKVKRIITLSKYIAIYVPRVSLIKIGR 378 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL T IV+EFPELQG +G YA E+ +AI EH KP GP + P + Sbjct: 379 AAYLAKADLATLIVKEFPELQGIMGGYYASYFQEDREIVEAITEHYKPIGPEQECPKSSA 438 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 +I +S+ADK+D+L+ A EK SGS D + LRR +GIIR+ILEN + IP+ I+ Sbjct: 439 AIVMSIADKIDSLVGLIAAGEKISGSYDQFGLRRMAIGIIRMILENNLHIPIRLLIDKSV 498 Query: 533 ------------------------NLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDN- 566 L+L F +R ++ L +RDIR D++++IL ++ N Sbjct: 499 SLYPKLVFTKDVTSVDHPHKLSRAELVLKFCLERFRVILKNRDIRQDIVDSILCKDDIND 558 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 LLT L+ + ++ +G++ L + KR+ I+ EK + + L+E+E+ Sbjct: 559 LLTAERQTVILDRYLNTPEGKQILSTYKRVSNIVNKAEKNDNTAYSAPYNKKFLIESEE- 617 Query: 627 LYAVISDFGT----HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 V+SD+ +I+++M ++ D L I F + V +N D ++R NRL Sbjct: 618 --MVLSDYAITACRNIKQAMQSGNFNAALDELIRFTPFINQFMNSVKINCDSDKLRRNRL 675 Query: 683 SLLQYIKNIILIV 695 SLL + + +V Sbjct: 676 SLLANVASTFHLV 688 >gi|148545333|ref|YP_001265435.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida F1] gi|166227920|sp|A5VWJ1|SYGB_PSEP1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148509391|gb|ABQ76251.1| Glycine--tRNA ligase [Pseudomonas putida F1] Length = 684 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 211/719 (29%), Positives = 345/719 (47%), Gaps = 66/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + E + L+ G+ Y + Y P RL + ++ L Sbjct: 5 DFLVELGTEELPPKALTSLGEAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP + G +A GF + G++ + + + G Sbjct: 65 QPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGVE------LAEIDQSGPKLRFSQHI 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L TIV ++ +P PK MRW+ + ++RP + ++ +L +++ Sbjct: 119 PGKATTDLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P + + + +Y+ DL +A VL D RR I L Sbjct: 169 VDCTILSQKAGRESRGHRFHHPETVVITTPANYVEDLRKAHVLADFAERRELISKRTAEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 AMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDS 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI V+NI++ D IVQGN +VV RL DA F+K+D+ Sbjct: 289 EGKLLPRFITVANIESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL+ RL +VVF A++GT ++ R+ L +A LI D RA Sbjct: 335 -------QPLETFNERLK--NVVFQAQLGTVYDKAERVSKLAAFVAPLIGGDAQRAGRAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 386 LLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEFAVKQ 505 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 DQ ++ F DRL+ D I ++ + + L ++ + Sbjct: 506 FGAKVKAPGLADQ-VLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAVQA 564 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E KR+ +L+ K I+ ++ P+Y E LY+ I +Q Sbjct: 565 FRKLPEAEALAAVNKRVSNLLS---KAEGAIAEQVEPKYFDNANEFSLYSAIQQADQAVQ 621 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V ++ Sbjct: 622 PMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADI 680 >gi|46143625|ref|ZP_00134813.2| COG0751: Glycyl-tRNA synthetase, beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209267|ref|YP_001054492.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae L20] gi|166227908|sp|A3N3A1|SYGB_ACTP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|126098059|gb|ABN74887.1| Glycyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 689 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 219/722 (30%), Positives = 360/722 (49%), Gaps = 67/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + + ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQADLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ +I D + V+ AV+ Sbjct: 65 QPSKEIEKRGPAVSAAFDADGKPTKAAEGWARGCGITVDQADRIATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ +E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGSE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF + D Y+ L E+ MV+ D R+ IL + Sbjct: 172 LIEGEILGVKINNVIRGHRFLGEREFTISHADEYLTALREKGMVVADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D AI++GN +VV RL DA F+K Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFFFK--------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +R Sbjct: 336 -----TDLKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 ALFGNKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA--VISDFGT 636 F + E + KR+ ILA K EIS+EI + LL+EAE++ A VIS T Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISIEID-RTLLVEAEEKALAEQVIS-LQT 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V Sbjct: 624 ELAPTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|241662033|ref|YP_002980393.1| glycyl-tRNA synthetase subunit beta [Ralstonia pickettii 12D] gi|240864060|gb|ACS61721.1| glycyl-tRNA synthetase, beta subunit [Ralstonia pickettii 12D] Length = 697 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 219/704 (31%), Positives = 348/704 (49%), Gaps = 76/704 (10%) Query: 31 GLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKA---- 81 GLL EEG + + TP RL + G+ +P++ + E++ P A GK A Sbjct: 37 GLL-EEGAAVEG---FATPRRLAASITGVRRTAPDRELREKVLPVTIAFDAEGKPAAPLV 92 Query: 82 --IDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWP 138 + ++ G++ I+ +++ P K + L+ D L+T + + +P P Sbjct: 93 KKLAALAKTVGVEAIAPESLERAPDGKAEALFYRYTARGALLADGLQTALSQTVANLPIP 152 Query: 139 KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 K M + + ++RP ++ +L +E +I + + GN+T GHRF + Sbjct: 153 KVMTYQRPNG--ENVQFVRPAHKLIALLDSE-----VIPVSAFGLQSGNVTLGHRFLSAG 205 Query: 199 PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV 257 I +Q Y LE + V+ R+ AI A L +A +V + LL+E+ LV Sbjct: 206 EIVIQDAASYASTLESQGKVIAGYGKRKEAI--RAELLKTAGADTVVMPEALLDEVNALV 263 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAA 317 EW V+ F++ +L +P+E + LT++TNQK F +G L N F++VSNI A+D A Sbjct: 264 EWPVVYPCHFEEAFLAVPQECLILTMQTNQKYFALTDAQGHLRNRFLIVSNI-ATDTPEA 322 Query: 318 IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 I+QGN RVV RL DA F+++D+ KPL R+ L V Sbjct: 323 IIQGNERVVRPRLADARFFFEQDKK--------------------KPLADRVPLLSR--V 360 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 V+H KIGTQ ERVSR++ + ++A+ + ADVA R +L+KADL T++V EFPELQG + Sbjct: 361 VYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRGALLAKADLLTDMVGEFPELQGTM 420 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA E A EH +PR + +P+ V+LADK +TL+ W I +P+ Sbjct: 421 GTYYARHDGEPDDVALACSEHYQPRFAGDALPSTATGTVVALADKFETLVGIWGIGLQPT 480 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----------------NLIL---FF 538 G KDP+ALRR LGI+R+++E PL+ I+D NL F Sbjct: 481 GEKDPFALRRHALGILRMLIEK----PLALTIDDALQIAAASFDGIAAVKPNLAAITDFL 536 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 +DRL+ YL D+ + +EA++ L IV ++ + F + + E + KRI Sbjct: 537 YDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAALPQAEALAAANKRITN 596 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 IL KK + P L +AE+ L+ + + ++ + L + Sbjct: 597 IL----KKTDVAIGAVQPPLLKEDAERALHQSVVAAEPQVHDAFARGDFTTALKTLAGLR 652 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 653 EAVDTFFDGVMVMADDTALRDNRLALLAELHGLMNRVADISKLA 696 >gi|262196558|ref|YP_003267767.1| glycyl-tRNA synthetase subunit beta [Haliangium ochraceum DSM 14365] gi|262079905|gb|ACY15874.1| glycyl-tRNA synthetase, beta subunit [Haliangium ochraceum DSM 14365] Length = 705 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 214/725 (29%), Positives = 346/725 (47%), Gaps = 73/725 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA + E LS L + + + ++ TP R+ L + ++ Sbjct: 4 DLLLEIGTEEIPAALLTGVIETLSRRAEDALADARLGHGSVTVLGTPRRIVLSVAEVAGQ 63 Query: 63 SPEKIEERLGP--RV-----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E +GP RV G KA GF + G++ + + + + KKG+ + + Sbjct: 64 QRDLSERVVGPPARVAFDADGRPTKAAAGFAKKNGVELDALERSEVEGKKGEYVVCTRHE 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL ++ I +PWPKSMRW + +++RP+ ++ +L E++ Sbjct: 124 AGRPAAEVLPGLLEALIAALPWPKSMRWGFGET-----AFVRPVHWLVALL-----GEQV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKV-QSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + L I GN + GHRF AP V SL Y+ + E V+ DP RR I + R Sbjct: 174 LPLQFAGIRAGNSSRGHRFLAPAAAPVPSSLPGYLEVMRERFVIADPALRREMIAAELSR 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + +G + D++LL E+ LVE+ GSF++ +L +P+E+I ++ +Q+ F Sbjct: 234 VEGEIGARVRPDEELLAEVANLVEYPMAVCGSFNEGFLEVPQEVIVSAMRAHQRYFAIED 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N F+ ++ D A +V+ GN RV+AARL DA F++ D+ + Sbjct: 294 ASGALVNRFVTIAGTVTRD--ADVVRAGNERVLAARLSDAQFFFREDRKGTLD------- 344 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL++ LD DVVF AK+G+ G +V RI + +A + AD V R Sbjct: 345 ------DLAQKLD---------DVVFQAKLGSIGAKVRRIGAIATALAAQVGADETAVAR 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL + +V EFP+LQG +G+ YA L E+ + AI EH PRG + +P + Sbjct: 390 AAELCKADLVSHMVYEFPDLQGVMGQHYARLAGESDAVASAIYEHYLPRGAGDELPATDV 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +AD++DTL+ +A+ PSGS DPY LRRA LGI+ ++LE + LS+ +++ Sbjct: 450 GAVLGIADRIDTLLGCFAVGLSPSGSADPYGLRRAALGILTLLLERGWSLSLSRLVDEAA 509 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ F RLK L + D +EA L D++ + + Sbjct: 510 AALAGTVEVSAAHKEEVLSFLRTRLKGLLS--ALPADCVEAALSAGFDDVPDARARAQAV 567 Query: 578 NEFFSSAKGEKFLLSAKRIFQIL------------AIEEKKNREISLEISPQYLLLEAEK 625 E ++ KR+ +L + + P + +AEK Sbjct: 568 AALRQREDFEPLGVAFKRVANLLKSAADKAGAGAAGADAAADAAADAAPDPDLMSDDAEK 627 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L++ + E ++ Y +L + P++ FFD+VLV +D VR NRL+LL Sbjct: 628 ALWSAYGEIERQAAEPLERGDYEAALAVLAELKSPVDRFFDEVLVMAEDPRVRQNRLALL 687 Query: 686 QYIKN 690 I Sbjct: 688 SRIGG 692 >gi|187927503|ref|YP_001897990.1| glycyl-tRNA synthetase subunit beta [Ralstonia pickettii 12J] gi|309779795|ref|ZP_07674550.1| glycyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] gi|238691845|sp|B2UFN5|SYGB_RALPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|187724393|gb|ACD25558.1| glycyl-tRNA synthetase, beta subunit [Ralstonia pickettii 12J] gi|308921372|gb|EFP67014.1| glycyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 697 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 220/704 (31%), Positives = 348/704 (49%), Gaps = 76/704 (10%) Query: 31 GLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKA---- 81 GLL EEG + + TP RL + G +P++ + E++ P A GK A Sbjct: 37 GLL-EEGAAVEG---FATPRRLAASITGARRTAPDRELREKVLPVTIAFDAEGKPAAPLV 92 Query: 82 --IDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWP 138 + ++ G++ I+ +++ P K + ++ D L+T + I +P P Sbjct: 93 KKLAALAKTVGVEVIAAESLERGPDGKAEALFYRYTARGAVLADGLQTALSQTIANLPIP 152 Query: 139 KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 K M + + ++RP ++ +L +E +I + + GN+T GHRF + Sbjct: 153 KVMTYQRPNG--ENVQFVRPAHKLIALLDSE-----VIPVSAFGLQSGNVTLGHRFLSAG 205 Query: 199 PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV 257 I +Q Y LE + V+ R+ AI A L +A +V + LL+E+ LV Sbjct: 206 EIVIQDAASYASTLESQGKVIAGYGKRKEAI--RAELLKTAGADTVVMPEALLDEVNALV 263 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAA 317 EW V+ F++ +L +P+E + LT++TNQK F +G L N F++VSNI A+D A Sbjct: 264 EWPVVYPCHFEEAFLAVPQECLILTMQTNQKYFALTDAQGHLRNRFLIVSNI-ATDTPEA 322 Query: 318 IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 I+QGN RVV RL DA F+++D+ KPL R+ L V Sbjct: 323 IIQGNERVVRPRLADARFFFEQDKK--------------------KPLADRVPLLSR--V 360 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 V+H KIGTQ ERVSR++ + ++A+ + ADVA R +L+KADL T++V EFPELQG + Sbjct: 361 VYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRGALLAKADLLTDMVGEFPELQGTM 420 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA E A EH +PR + +P+ V+LADKL+TL+ W I +P+ Sbjct: 421 GTYYARHDGEPDDVALACSEHYQPRFAGDALPSTATGTVVALADKLETLVGIWGIGLQPT 480 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----------------NLIL---FF 538 G KDP+ALRR LGI+R+++E PL+ I+D NL F Sbjct: 481 GEKDPFALRRHALGILRMLIEK----PLALTIDDALQIAAASFDGIAAVKPNLAAITDFL 536 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 +DRL+ YL D+ + +EA++ L IV ++ + F + + E + KRI Sbjct: 537 YDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAALPQAEALAAANKRITN 596 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 IL KK + P L +AE+ L+ + + ++ + L + Sbjct: 597 IL----KKTDVAIGAVQPPLLKEDAERALHQSVVSAEPQVHDAFARGDFTTALKTLAGLR 652 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 653 EAVDTFFDGVMVMADDTALRDNRLALLAELHGLMNRVADISKLA 696 >gi|307251102|ref|ZP_07533026.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856932|gb|EFM89064.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 689 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 218/722 (30%), Positives = 358/722 (49%), Gaps = 67/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 172 LIEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D AI++GN +VV RL DA F+K Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFFFK--------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +R Sbjct: 336 -----TDLKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 ALFGNKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA--VISDFGT 636 F + E + KR+ ILA K EIS EI + LL+EAE++ A VIS T Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISTEID-RSLLVEAEEKALAEQVIS-LQT 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V Sbjct: 624 ELAPTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|157826327|ref|YP_001494047.1| glycyl-tRNA synthetase subunit beta [Rickettsia akari str. Hartford] gi|229558572|sp|A8GQ64|SYGB_RICAH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157800285|gb|ABV75539.1| glycyl-tRNA synthetase subunit beta [Rickettsia akari str. Hartford] Length = 662 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 226/689 (32%), Positives = 346/689 (50%), Gaps = 65/689 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + E I+ ++ + P R+ LY L + + EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTQIFAESA-IFAKVQVFVGPRRITLYATHLPKVTLPQEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLKTIVPVA 131 P + + + AI+GF + +S ++ +Y ++K K R I+++L I+ A Sbjct: 72 PSIESPEAAINGFCSA---HNVSKLELSTKLINNQLYYFFVKKTKEREIKEILPKIIIEA 128 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 I K W KSM W WIRPL++ILCI E ++ L + NITYG Sbjct: 129 INKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----VLPLQFGHLTANNITYG 178 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR ++V Y L E V+L+ R I LA++ L + ED L+E Sbjct: 179 HRLTDNKKLEVTDFKDYRNKLLENNVVLERIKREEIIKTGLLELANSQNLNIKEDARLIE 238 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E+ GL E+ V +G +K+L LP+E++ +++T+QK F + G A F+ VSN + Sbjct: 239 EVAGLSEFPVVLLGKIAQKFLELPKEVLIASMRTHQKYFCLFDKTGNFAPYFLFVSNGRF 298 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 ++ ++QGN +V++ARL DAL+F+K+ D++K L+ R+ + Sbjct: 299 AN-AELVIQGNEKVLSARLSDALYFYKQ--------------------DIAKTLESRLGK 337 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L+ V FHAK+G E++ I I I + + A L K+DL +E+V EFP Sbjct: 338 LEA--VTFHAKLGNLREKIEHI----TDICNYIAPNNKDLITAAKLCKSDLVSEMVGEFP 391 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA + N AI +H KP+G +NV + ++ KLD+L+ Sbjct: 392 DLQGIMGYYYAKYEGLNEEIAAAIRDHYKPQGLSDNVASGNAALLALAD-KLDSLVGLMI 450 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------EDQNLIL-FFHD 540 E P+GS DPYALRR LGIIRIILENK+++ L+ I D++LI FF + Sbjct: 451 AGEAPTGSGDPYALRRQALGIIRIILENKLELNLNDLIIFSLKLYGNSADKDLITSFFEE 510 Query: 541 RLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 R K Y ++ DI LI A+L + NL+ ++ L EF G++ L + KR I Sbjct: 511 RAKFYFKNKYDIL--LINAVL---DLNLVDTQFKLETLKEFLIEDAGKQLLNAYKRASNI 565 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ V+ I +S+ K Y + +LL + Sbjct: 566 IG-----DQKITGLVDASLFSTQPEKDLFEVVQKISPQIIDSIADKDYKRALNLLSFLLT 620 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 PI FFD VLVN D ++ NRLSLLQ I Sbjct: 621 PITSFFDNVLVNDPDPKIAQNRLSLLQNI 649 >gi|218767499|ref|YP_002342011.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis Z2491] gi|25009340|sp|Q9JW67|SYGB_NEIMA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|121051507|emb|CAM07800.1| putative glycyl-tRNA synthetase beta subunit [Neisseria meningitidis Z2491] Length = 687 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 214/664 (32%), Positives = 344/664 (51%), Gaps = 68/664 (10%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + +L+ ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKLLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLL 219 ++ + + I+++ + + GN T GHRF + I +++ D Y + E ++ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSGNKTLGHRFLSDGEITIENADSYAEQMREQGKVV 217 Query: 220 DPECRRNAIL-----NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 R A + A RL +AV D+ LL+E+ LVEW V F++ +L + Sbjct: 218 ASFAERKAAIQTALEGQARRLNAAV----AADEALLDEVTALVEWPVVLEAGFEEHFLAV 273 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA Sbjct: 274 PQECLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAE 332 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+K+DQ L+ R+ +L VV+H KIG+Q ER+ R++ Sbjct: 333 FFYKQDQK--------------------ATLESRLPKLS--GVVYHNKIGSQAERIERLQ 370 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 + IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A Sbjct: 371 SIAAHIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEA 430 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 +E+H +PR + +P +KI+ V+LADKL+TL+ W I P+ KDPYALRR+ LGI+R Sbjct: 431 VEQHYQPRFAGDKLPESKIATAVALADKLETLVGIWGIGLIPTSDKDPYALRRSALGILR 490 Query: 515 IILENKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 ++++ +D+ L Q D F RL + L + D D++ A+L Sbjct: 491 MLMQYGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLA 549 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 + L +V ++ + F + + KR+ +L +K + E+ + ++ L Sbjct: 550 KQPRRLDDVVAKLQAVASFKQLPEAAALAAANKRVQNLL---KKADAELGV-VNESLLQQ 605 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + EK L+A I ++ + L S+ ++ FFD V+V +D V+ NR Sbjct: 606 DEEKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNR 665 Query: 682 LSLL 685 L+LL Sbjct: 666 LNLL 669 >gi|307610542|emb|CBX00128.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila 130b] Length = 688 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 198/702 (28%), Positives = 354/702 (50%), Gaps = 60/702 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ + +I+ D KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCGVTVDALTKIQTD--KGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V ++++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSLSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 LG-----VTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AARLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + FI VSNI AS +V GN +V+ ARL DA F+K+D+ Sbjct: 292 YGELLHYFITVSNI-ASSNPKQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 338 -------QPLSAHIPSTE--QVIFQVKLGSMYDKVQRIKAMMNHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E + A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAAVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 +SLAD++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I Sbjct: 449 ALSLADRIDTLVGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 530 ------EDQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +D+NL+ F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I Q + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEQLIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 Y + LL S+ EP++ FFD V+V V++ ++ NR Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNR 668 >gi|165977240|ref|YP_001652833.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|238687522|sp|B0BSX5|SYGB_ACTPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|165877341|gb|ABY70389.1| glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 689 Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 218/722 (30%), Positives = 357/722 (49%), Gaps = 67/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 172 LIEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D AI++GN +VV RL DA F+K Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFFFK--------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +R Sbjct: 336 -----TDLKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSA 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 ALFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA--VISDFGT 636 F + E + KR+ ILA K EIS EI + LL+EAE++ A VIS T Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISTEID-RSLLVEAEEKALAEQVIS-LQT 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V Sbjct: 624 ELAPTFANGEYQTALDRLASLRETVDSFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|33152920|ref|NP_874273.1| glycyl-tRNA synthetase subunit beta [Haemophilus ducreyi 35000HP] gi|71153558|sp|Q7VKG6|SYGB_HAEDU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|33149145|gb|AAP96662.1| glycyl-tRNA synthetase beta subunit [Haemophilus ducreyi 35000HP] Length = 688 Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 220/723 (30%), Positives = 358/723 (49%), Gaps = 70/723 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + K A + + L++ G+ ++ + + TP RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKKLATAFADNIQAELEQAGLAFEKIEWFATPRRLAVKVLSLAIA 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP VG+ KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKEIEKRGPAVGSAFDADGQPTKAAEGWARGCGISVEQADRVVTDKGEWLVHRAVVEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 KP + D+L +V A+ K+P K MRW+ +IRP+ ++ +L E Sbjct: 125 KPTK---DLLVDMVASALAKLPIAKPMRWAD-----KTVQFIRPVHTVTLLLGNE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ I N+ GHRF ++ D Y + L ++ V+ D R+ IL DA Sbjct: 172 LIEGEILGITIANVVRGHRFLGESQFQIAHADEYPQILRDKGAVIADFAERKAIILRDAQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G + DLLEE+ LVE+ V + F++++L +P E + T+K +QK F Sbjct: 232 AKAAALGGVADIEDDLLEEVTSLVEYPNVLVAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI VSNI D +AI++GN +VV RL DA F Sbjct: 292 DKEGNLLPHFIFVSNINPQDP-SAIIEGNEKVVRPRLSDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F DL + L ++ RL+ V+F ++GT ++ RI L IA+ I ADV R Sbjct: 334 ---FKTDLKQRLVDQLPRLET--VLFQQQLGTLRDKTDRIEQLSGVIAEQIGADVQKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E A+ E PR + +PT+ + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDALPTSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + +V+LADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L +E Sbjct: 449 ACSVALADKIDTLTGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLVHLVEKST 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAIL--RPEN-DNLLTIVDLIK 575 +++ F R + + D I D+I+A+L RP + V + Sbjct: 509 GLFGDKLTNKAVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 H F S+ E + KR+ ILA + EI+L + E+ L + Sbjct: 569 HFRTFESA---EALAAANKRVTNILAKADIAIGEINLSACVE----PTERALAEAVLALK 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + Y + L ++ P++ FFD V+VN +D +R NRL++L ++++ L V Sbjct: 622 DEVRPLIAKANYTAVLTQLANLRTPVDNFFDHVMVNAEDPSLRQNRLAILSTLQSLFLEV 681 Query: 696 INV 698 ++ Sbjct: 682 ADI 684 >gi|327399084|ref|YP_004339953.1| glycyl-tRNA synthetase subunit beta [Hippea maritima DSM 10411] gi|327181713|gb|AEA33894.1| Glycyl-tRNA synthetase beta subunit [Hippea maritima DSM 10411] Length = 670 Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 227/719 (31%), Positives = 372/719 (51%), Gaps = 80/719 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+++EE+P +D +L ++ + + N+ Y TP R+ L Sbjct: 4 LFELFTEELPTSEMEHLEKDFLEASKKILSDKNIEFNNLIFYLTPRRMAL---KFEFDEF 60 Query: 65 EKIEER--LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 K+E++ LGP + G KA++GFL+ T+ D +++ KKG+ Y+AV+ K Sbjct: 61 VKVEDKKVLGPPKSVCFKDGKPTKALEGFLKKNN-ATMDDI-VEEKTKKGE-YIAVIIKG 117 Query: 117 KRLIEDVLKTIVPVAIQKV----PWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K + K IV AI ++ + K MRW F + RP+ ++ ++ E Sbjct: 118 KNV---QAKPIVIQAIDQILKDIHFNKQMRWGD-----GEFEFTRPVHGVVFLIDNE--- 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I+D + K N TYGHRF + +V+ D+Y L+E V+++ RR ILN Sbjct: 167 --IVDFEFKGKKASNTTYGHRFLSSGSFRVE-YDNYESTLKENFVIVNQNERRQLILNQL 223 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+ G +LV D++LL E++ LVE+ + +G F++K+L LP+E++ ++K +Q+ F Sbjct: 224 KEYANKKGAKLVYDEELLNEVVNLVEYPVMVIGRFEEKFLKLPKEVLITSMKDHQRYFAF 283 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 T++G L N F +SNI+ +D I +G RV+ AR DA F++ D+ + Sbjct: 284 -TKDGKLLNEFAAISNIK-TDNMDLIREGYERVLRARFSDAEFFFEEDKKH--------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L++ + +L + +FH K+G+Q +R +R+ L + +A+ + D Sbjct: 333 -----------KLEEFVPKLSQM--MFHEKLGSQLDRTNRLVGLAEFLAEKLGFDTNKAK 379 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL T++V EFPELQG +G+EYA+L +E+ AI E P+ + +P Sbjct: 380 RAAYLSKADLLTQMVYEFPELQGVMGREYALLSSEDSEVATAIYEQYLPKE--DEIPRGG 437 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLD ++ + KP+G+KDPY LRRA LGIIR ++EN + + L + +E Sbjct: 438 AGICLSIADKLDIIVGGFFAGLKPTGAKDPYGLRRAALGIIRTLIENGLFLNLREVLEKS 497 Query: 533 NLIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + FF R K Y D HD++EAI + D++ +K LNEF Sbjct: 498 AQLYNKTIELYEIEEFFAVRFKNYFS--DYPHDVLEAIT-FKFDDIYDAYLRLKALNEFV 554 Query: 582 SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S K ++ + KR+F IL E + E + L + K+L V ++F Sbjct: 555 ESDKNKEKQFAIKRVFNILKEFEGSRVDESLFNQDEERALFDKVKQLEEVEAEF------ 608 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y + + + S + I+ FFD V+V D +VR+NRLSLL ++ I+L + N + Sbjct: 609 -ISKKDYLGLLNQITSNKDVIDNFFDSVMVMDKDEKVRNNRLSLLNKLRKIVLNIANFK 666 >gi|161869283|ref|YP_001598450.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis 053442] gi|229558565|sp|A9M127|SYGB_NEIM0 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|161594836|gb|ABX72496.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis 053442] Length = 687 Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 215/660 (32%), Positives = 339/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 L +L D I+++ + + N T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HG-LVVLHGGD----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNASVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|332970432|gb|EGK09424.1| glycyl-tRNA synthetase beta subunit [Kingella kingae ATCC 23330] Length = 683 Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 207/650 (31%), Positives = 336/650 (51%), Gaps = 58/650 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKK 105 Y +P RL + + + ++ + GP V A +KAI GF RS G++ + ++ D K+ Sbjct: 50 YASPRRLAVQVANVKAVQADQHVVKKGPAVSANEKAIAGFARSCGVE-VGSLKVINDGKQ 108 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW-STTHSPISAFSWIRPLKSILC 164 D+Y + + + D+L IV A++K+P PK MRW S+TH+ ++RP+ ++ Sbjct: 109 -DIYAHEFTQTGQTLADLLGEIVNAAVKKLPIPKVMRWGSSTHT------FVRPVHGLVA 161 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPEC 223 + A+ ++ +++ + N T GHRF + I D Y + L E+ V+ + Sbjct: 162 MHGAD-----VLPVNVLGLASRNFTLGHRFLSQGEIVFAQADDYAKQLAEQGKVIANFAE 216 Query: 224 RRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 R+NAI + A ++ + D+ LL+E+ LVE+ V F+ +L +P+E + LT+ Sbjct: 217 RKNAIQAALNEQAGSLKATVAADESLLDEVTALVEYPVVLQAGFEAHFLAVPQECLILTM 276 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + NQK F +G L N F+LVSN+QA+D + I+ GN RV+ ARL DA F+K+DQ Sbjct: 277 QQNQKYFPLLDAQGKLMNRFLLVSNLQAADP-SHIIHGNERVLRARLSDAEFFYKQDQK- 334 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 L+ R+ +L VV+H KIG+Q ERV R++ + IA Sbjct: 335 -------------------ATLESRLPKL--ASVVYHNKIGSQAERVERLQTIAAHIASA 373 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + AD A +RA L+KADL TE+V EFPELQG +GK YA L E AIE+H +PR Sbjct: 374 LGADKAAAERAARLAKADLVTEMVGEFPELQGTMGKYYAQLDGEQPEIALAIEQHYQPRF 433 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P N I V+LADKL+TL+ W I P+G KDPYALRRA LG++R+++ + I Sbjct: 434 AGDALPENAIGTAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGVLRMLMNYPLSI 493 Query: 524 -PLSQFIEDQ---NLIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L + DQ N++ F RL + L + D D++ A+L D L Sbjct: 494 NDLLNTVADQFPANVLADKAKTVAEIADFMQARLAVLLQN-DYSQDVVAAVLAQRPDRLN 552 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + ++ + +F + + KR+ +L + + +++ + Q + EK L+ Sbjct: 553 DLAAKLQAVEQFKQLPESAALAAANKRVQNLLKKADAQLGDVNASLFAQ----DEEKALF 608 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 A D + ++ + L +I ++ FFD V+V +D V+ Sbjct: 609 AAAQDLQPKVADAAKRGDFQAALTELAAIKPQVDAFFDGVMVMAEDAAVK 658 >gi|299532684|ref|ZP_07046072.1| glycyl-tRNA synthetase beta subunit [Comamonas testosteroni S44] gi|298719319|gb|EFI60288.1| glycyl-tRNA synthetase beta subunit [Comamonas testosteroni S44] Length = 704 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 214/727 (29%), Positives = 364/727 (50%), Gaps = 89/727 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + ++ LK +G++ + + Y +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAAVIFEQLKAQGLLASSESRLTAYASPRRLAAHITEV 64 Query: 60 SPHSPEK-IEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 P + +K + ++L P + L + G T + + + +A L++ Sbjct: 65 LPQAEDKAVSQKLMP--------VSVALDAEGKPTAALLKKLAALGADESAVAALKRQGE 116 Query: 119 ---------------LIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPISAFSWIR 157 L+ D ++ + A+ K+P PK MR W++ H ++R Sbjct: 117 GKAEALFYESTAKGVLLTDGVQKALDEALAKLPIPKVMRYQLQDGWTSVH-------FVR 169 Query: 158 PLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEA 215 P ++ + + +I + + G T+GHRF A P+ +Q+ D Y L EE Sbjct: 170 PAHGLVVM----HGTQVLIGVKALGLTAGAATHGHRFEAAVDPVVIQNADSYAEQLREEG 225 Query: 216 MVLLDPECRRNAILNDAHRLASAVGLEL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLC 273 V+ RR I A +G ++ ++D LL+E+ LVE V + F+K++L Sbjct: 226 AVIASFTERRADIARQLQAAAERIGGDVRPIDDPALLDEVTALVELPNVLVCEFEKEFLA 285 Query: 274 LPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDA 333 +P+E + LT+K NQK F G L + F++VSNIQ D +A+V GN RVV RL DA Sbjct: 286 VPQECLILTMKANQKYFPLLDANGKLTHQFLIVSNIQPQDA-SAVVGGNERVVRPRLADA 344 Query: 334 LHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI 393 F F+ D K L R+ +LD VV+H K+GTQGER++R+ Sbjct: 345 KFF--------------------FDQDRKKTLASRVEQLD--KVVYHNKLGTQGERIARV 382 Query: 394 RVLGKKIAQ-LIDADVA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R + K IAQ L ++++ L D+A +L+K DL T++V EFPELQG +G+ YA +++ Sbjct: 383 RAIAKSIAQQLGNSELGRLADQAAMLAKTDLVTDMVGEFPELQGIMGRYYAQNDGLDVAV 442 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 DAIE+H KPR + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG Sbjct: 443 ADAIEDHYKPRFAGDELPRGDVGVIVALADKLETLVGMFGIGNLPTGDRDPFALRRHALG 502 Query: 512 IIRIILENKIDI--------PLSQF---IEDQN--LILFFHDRLKLYLHDRDIRHDLIEA 558 +IR+++E +++ L F I+D L+ F +DRL ++ +EA Sbjct: 503 VIRMLVEKDLELDLETLLVSTLPAFGDKIQDATPQLVEFIYDRLANMFREQGYSAQEVEA 562 Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY 618 +L + L + ++ + F + + + KR+ IL +K ++ +++ Sbjct: 563 VLALQPQRLSDVQKRLEAVRAFAALPEAPALAAANKRVGNIL---KKAETDVQPQVNEAL 619 Query: 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 L+ +AEK LYAV+ Q+ Y L ++ ++ FF+QV+VN +D +R Sbjct: 620 LVEQAEKELYAVLQQVAPKAQQQFAAGDYTASLQTLAALRASVDAFFEQVMVNAEDPALR 679 Query: 679 DNRLSLL 685 NRL LL Sbjct: 680 TNRLGLL 686 >gi|307133195|ref|YP_003885211.1| glycine tRNA synthetase, subunit beta [Dickeya dadantii 3937] gi|306530724|gb|ADN00655.1| glycine tRNA synthetase, beta subunit [Dickeya dadantii 3937] Length = 689 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 211/718 (29%), Positives = 338/718 (47%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ YQ++ + P RL L + GLS Sbjct: 6 FLVEIGTEELPPKALRTLAESFAANFTAELDAAGLGYQSVNWFAAPRRLALKVAGLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERLTTD--KGEWLLFRAQVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK M W + ++RP+ ++ +L E ++ Sbjct: 124 GEAAQALLPGMVSTALAKLPIPKLMHWGDKET-----QFVRPVHTVTLLLGDELVPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D GHRF + + D Y + L E VL D E R+ I DA Sbjct: 179 GID-----SARTIRGHRFMGEPEFTIDNADQYPQILLERGKVLADYEARKAKIKADAEDA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARNIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 SGKLMPNFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI L +A+ I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGTLRDKTDRIAALAGWVAEQIGADVNHAKRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA +E A+ E +PR +++P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDSEAEDVAVALNEQYQPRFAGDDLPSSPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E ++ + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKRLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D I+A+L +K ++ F Sbjct: 511 YGDKLTNVNVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KR+ ILA K ++ + L E +L ++ + + Sbjct: 571 RTLEQAEALAAANKRVSNILA---KSTETLNDSVQAALLKENEEIQLATYVTALTSKLAP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + EP++ FFD+V+VN DD++VR NRL+LL ++N+ L V ++ Sbjct: 628 WFAEGRYQEALGELAQLREPVDNFFDKVMVNADDQQVRINRLTLLNELRNLFLKVADI 685 >gi|52081072|ref|YP_079863.1| glycyl-tRNA synthetase subunit beta [Bacillus licheniformis ATCC 14580] gi|52786452|ref|YP_092281.1| glycyl-tRNA synthetase subunit beta [Bacillus licheniformis ATCC 14580] gi|319644969|ref|ZP_07999202.1| GlyS protein [Bacillus sp. BT1B_CT2] gi|52004283|gb|AAU24225.1| glycyl-tRNA synthetase (beta subunit) [Bacillus licheniformis ATCC 14580] gi|52348954|gb|AAU41588.1| GlyS [Bacillus licheniformis ATCC 14580] gi|317392778|gb|EFV73572.1| GlyS protein [Bacillus sp. BT1B_CT2] Length = 679 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 216/721 (29%), Positives = 354/721 (49%), Gaps = 69/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR H + L L LKE+ + + +++ Y +P RL + ++ ++ Sbjct: 5 DLLLEIGLEEMPARFMHDSMTQLGEKLESWLKEKNIAFGSVKLYNSPRRLAVLVENVAEK 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF R G + D K KG Y+ V + Sbjct: 65 QDDVKEEAKGPAKKIALDENGEWTKAAIGFSRGQG-ASPEDLYFKD--IKGTEYVFVQKF 121 Query: 116 PKRLIEDVLKTIVPVA--IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K +D + + + + +PK+MRW + +IRP+K I+ + +E Sbjct: 122 QKG--QDTFSLLPELRDLVTSLHFPKNMRWGSED-----LKYIRPIKWIVALFGSE---- 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + G T GHRF + + Y LE V+ DP R+ I+ Sbjct: 171 -VVPFSVAHVETGRTTQGHRFLG-KAADLSAPSEYEATLESQFVIADPAKRKQLIVKQLD 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA+ ++ D+DLL+E+ LVE+ V GS+++++L +PEE++ T+K +Q+ F + Sbjct: 229 ELAAEKSWDIPRDEDLLDEVNHLVEYPTVLFGSYEEEFLAIPEEVLVTTMKEHQRYFPVK 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L F+ V N S + +GN +V+ ARL DA F+K DQ Sbjct: 289 DENGSLLPYFVTVRNGD-SRALENVARGNEKVLRARLSDASFFYKEDQ------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 K N+D + + +L+ +VFH ++G+ G++V R L ++IA++I AD V L Sbjct: 336 --KLNID------ENVRKLE--KIVFHEELGSLGDKVRRTEALAERIAEVIGADQETVQL 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA +SK DL T +V EFPELQG +G++YA + E A+ EH PR P+ Sbjct: 386 IKRAAHISKFDLVTHMVYEFPELQGIMGEKYARMLGEKEEVALAVNEHYMPRQAGGQTPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 + V+LADKLDT+ +F+ I P+GS+DPY LRR GI++I+L+ I + Sbjct: 446 SIAGAVVALADKLDTVASFFKIGVIPTGSQDPYGLRRQASGIVQILLDRNWGISFKELAA 505 Query: 530 -----EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + L+ FF RLK L +IR+D+++A+L N L +K S+A Sbjct: 506 FAGQEANSELLEFFKQRLKYVLTAENIRYDVVDAVLESTN---LEPYSAVKKAAVLESAA 562 Query: 585 KGEKFLLSAKRIFQILAIEEKKNR---EISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 +F +A+ + ++++I +K + SL +PQ E+ L+ I+ Sbjct: 563 AKPEFKETAEALARVISISKKSETSAIDASLFENPQ------EEELFKAYEACRQQIETL 616 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 K Y L + EPIE +FD +V+ +D ++ NRL+ + + +I N+ I Sbjct: 617 YQAKDYEGAFSELSKLKEPIEAYFDHTMVHAEDERLKANRLAQMASLAELIRSFANINAI 676 Query: 702 V 702 + Sbjct: 677 I 677 >gi|298369572|ref|ZP_06980889.1| glycyl-tRNA synthetase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298282129|gb|EFI23617.1| glycyl-tRNA synthetase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 687 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 214/660 (32%), Positives = 341/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HRLIVLHGGD-----IVNVSVLGLQSGNQTLGHRFLSGGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI + A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 218 ASFAERKVAIQTALNEQAGRLKATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTTFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E+ L + EK Sbjct: 554 RLDDLTIKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVDESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA D I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQDLQPKITAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLL 669 >gi|323350338|ref|ZP_08086003.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis VMC66] gi|322123523|gb|EFX95194.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis VMC66] Length = 679 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 219/718 (30%), Positives = 362/718 (50%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQFVITSPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 SEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRSIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + + ++P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLAAAIEA 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD T++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLATNL-------------DQLFALSPIIDAFFDHTMVMAEDETVRNNRLALL 660 >gi|226953821|ref|ZP_03824285.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter sp. ATCC 27244] gi|226835412|gb|EEH67795.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter sp. ATCC 27244] Length = 689 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 213/720 (29%), Positives = 363/720 (50%), Gaps = 68/720 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L LK+ G+ + + Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALKAETEKGLKDAGLNFAAIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K + L+ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEK-----VCFLKD 121 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D + Sbjct: 122 VKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---Q 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I + + Sbjct: 172 VVEASIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQDQVKK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 232 LADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLIN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI +SNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 292 AEGKLQPYFITISNIESKDP-IQIIEGNEKVVRPRLSDAEFFFLQDQK------------ 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L ++VF A++GT + RI L ++ + A+ A ++A Sbjct: 339 --------QPLASRKEKL--ANMVFQAQLGTLWNKSERIAKLAVALSPITGANAADAEKA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL +E+V EFPELQG G YA L+ EN +A+ E P+ + +P K Sbjct: 389 ALLAKCDLTSELVGEFPELQGIAGTYYARLEGENHEVAEALGEQYLPKFAGDVLPQTKTG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN +D+ + + + Sbjct: 449 TTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENILDVTIEELVNFALQ 508 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F R + D+ + D+I+A+ + L + +N Sbjct: 509 GYGDVVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVIQAVQALAPKSPLDFDKRVTAVN 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA E + +E + L+ AEK LYA +S + Sbjct: 569 HFRTLPEAAALAAANKRVANILAKEATPEGAV-VEAN---LVEAAEKALYAELSALTPVV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + + Y + L ++ PI+ FF+ V+V DD E++ NRL LL ++ + V +V Sbjct: 625 QPLLAARNYTEALSKLAALRAPIDAFFEGVMVMADDAELKANRLRLLAQLRGLFTAVADV 684 >gi|152980513|ref|YP_001352115.1| glycyl-tRNA synthetase, beta chain [Janthinobacterium sp. Marseille] gi|229470698|sp|A6SV18|SYGB_JANMA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|151280590|gb|ABR89000.1| glycyl-tRNA synthetase, beta chain [Janthinobacterium sp. Marseille] Length = 700 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 209/716 (29%), Positives = 361/716 (50%), Gaps = 59/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + K E + L L+ +G++ + + + +P RL ++L + + +K + ++ Sbjct: 16 PPKALKKIGEAFAQTLQASLQTQGLLSADSVLTAFASPRRLGVHLTKVLEQADDKTVMQK 75 Query: 71 LGPR---VGAGKKAIDGFLR---STGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDV 123 L P +GA KA L+ + G + +K++ K +V ++ D Sbjct: 76 LMPAAVGIGADGKATPALLKKLAALGADESAVAGLKRESDGKAEVLFFNSVVTGVMLTDG 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + +++RP ++ + A+ ++++ + + Sbjct: 136 LQKALEETLGKLPIPKVMAYQLADG-WETVNFVRPAHGLVALYGAD-----VLNISVLGL 189 Query: 184 PCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGL 241 GN T+GHRF A P+ ++ D Y + + E V+ RR I+ A+ G Sbjct: 190 HAGNTTHGHRFEAGIDPVYIRDADSYAKQIATEGAVIASFAERRAEIVRQLASAAAEAGS 249 Query: 242 EL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 L +ED+ LL+E+ GLVE V +G F++ +L +P+E + LT+K NQK F +G L Sbjct: 250 NLTPIEDEALLDEVTGLVERPNVLIGQFEEAFLEVPQECLILTMKANQKYFPLLDSKGGL 309 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N F++VSNI+ +D + ++ GN RVV RL DA F+ +D+ Sbjct: 310 SNKFLIVSNIRPADA-STVIGGNERVVRPRLADAKFFFDQDRK----------------- 351 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 K L R+A LD VV+H K+GTQGER++R+R + + IA + D D A L+K Sbjct: 352 ---KTLMSRVAGLD--KVVYHNKLGTQGERIARVRAIAQAIAGKLGVDAQQADTAAQLAK 406 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL T++V EFPELQG +G+ YA+ + DAIE+H KPR + +P N + + V+L Sbjct: 407 ADLLTDMVGEFPELQGIMGRYYALHDGLPAAVADAIEDHYKPRFAGDELPRNPVGMVVAL 466 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---------- 529 ADKL+TL+ ++I + P+G KDP+ALRR LGIIR+++E K+DI ++ I Sbjct: 467 ADKLETLVGLFSIGQVPTGDKDPFALRRHALGIIRMLIEGKLDIGINDLITAAEKPFNGL 526 Query: 530 --EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 E ++ +L F DRL L ++ I+A+L + L + + + + F + + Sbjct: 527 SAEHRSALLNFIFDRLANALREQGYSAQEIDAVLALQPQRLADVAERLAAVRAFAALPEA 586 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KR+ IL +K ++ ++ L AE L ++ + + Sbjct: 587 ASLAAANKRVGNIL---KKVEGTVAAQVDTALLKEPAEIALNQTLTTVKPQAEAAFARGD 643 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ P++ FFD V+VN +D +R+NR LL + + V ++ K+ Sbjct: 644 YTASLQALAALRNPVDAFFDGVMVNAEDIALRNNRQGLLATLHQAMNQVADISKLA 699 >gi|289209733|ref|YP_003461799.1| glycyl-tRNA synthetase subunit beta [Thioalkalivibrio sp. K90mix] gi|288945364|gb|ADC73063.1| glycyl-tRNA synthetase, beta subunit [Thioalkalivibrio sp. K90mix] Length = 693 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 209/702 (29%), Positives = 364/702 (51%), Gaps = 74/702 (10%) Query: 3 DFLLEIYSEEIP----ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 + L+E+ +EE+P AR++ AE L+ L+E G+ + TP RL + Sbjct: 6 ELLIELGTEELPPTALARLRDALAEGLTT----RLREAGLEPGEPETFATPRRLAVLFPD 61 Query: 59 LSPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + P++++ER GP V A KA+ GF RS G++ + ++ KG+ + Sbjct: 62 IPGQQPDQLQERRGPAVAAAFDDAGEPTKAVLGFARSCGVEV--ERLERETTDKGEYLVF 119 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 +P R + ++L ++ A++ +P PK MRW ++ + ++RP ++ + E Sbjct: 120 RQLQPGRPLGELLPDMLAAALEALPTPKRMRWGSSRT-----EFVRPAHWLVVLHGTE-- 172 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDP--ECRRNAIL 229 ++++ + E G T+GHRFH P ++++ + Y L + ++P E RR IL Sbjct: 173 ---VLEMTVLEQTAGRATHGHRFHQPGALELKRGNDYAERLR-SPGFVEPSFEARRERIL 228 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 H A A+G + D DLL E+ LVEW G FD ++L +P+E + T++ NQK Sbjct: 229 EQVHEQAQALGGRALVDADLLAEVTALVEWPVALTGGFDPRFLEVPQEALISTMQDNQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G + FI++SNI++ D A+ GN RV+ R DA FW++D+ Sbjct: 289 FPVVDEAGRMQPHFIVISNIESRDP-HAVRDGNERVLRPRFADAEFFWQQDRK------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K L++R+ LD VVF ++GT ++ R+ L +++A L+ D Sbjct: 341 -------------KRLEERLDALD--SVVFEKRLGTLRDKSVRLEALMQRLAVLMGLDAN 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L RA L+K DL T++V EF ELQG +G+ YA+ E+ + AIE+H PR +P Sbjct: 386 LAARAARLAKCDLVTQMVFEFTELQGTMGRYYALHDREDETVAAAIEQHYWPRQSGSELP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 ++ ++LAD+LDTL+ +AI ++P+G+KDP+ALRRA LG++RI++E ++ + L+ + Sbjct: 446 DAPLAQALALADRLDTLVGIFAIGKQPTGTKDPFALRRAALGLVRILVERELPLALTPLL 505 Query: 530 E-------------DQNLIL---FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + DQ + + +RL+ YL ++ H+ IEA+ D L V Sbjct: 506 QAAAEPIRERVPEADQAVEPVRDYILERLRGYLLEQGQAHETIEAVAAVAPDTPLDFVHR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ ++ F + E + KRI +L K E ++ P+ L L+ E++LY + Sbjct: 566 VRAVSLFRERPEAEALAAANKRIHNLL---RKAGEEAEADLDPEALALDEERQLYQGLQA 622 Query: 634 FGTHIQESMDHKRY-HQIGDLLHSICEPIEIFFDQVLVNVDD 674 +++++ Y H +G+L + + ++ FFDQV+V +D Sbjct: 623 VRPGVEQAVADGDYLHALGELA-GLRDRVDTFFDQVMVMAED 663 >gi|325141525|gb|EGC63995.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis 961-5945] gi|325199022|gb|ADY94478.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis G2136] Length = 687 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 209/660 (31%), Positives = 338/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + N T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q +D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +R L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERTARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|52842066|ref|YP_095865.1| glycyl tRNA synthetase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629177|gb|AAU27918.1| glycyl tRNA synthetase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 688 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 200/719 (27%), Positives = 359/719 (49%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S + + +I+ D KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCSVTVDALTKIQTD--KGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y ++ A V+ D RR AI++ L Sbjct: 177 LG-----VTSGCHSRGHRFHHPQEIRINSAASYEDQMKNAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G ++ ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + Sbjct: 232 AAPLGASVIMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNM 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI AS +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNI-ASSNPKQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 338 -------QPLSAHIPSTE--QVIFQVKLGSMYDKVQRIKAMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +N+P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAIVATALNEQYMPRFSGDNLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 +SLAD++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I Sbjct: 449 ALSLADRMDTLVGIFAIGQKPTGVKDPFKLRRHALSVVRLLISISAPLNLSTLIKEALAN 508 Query: 530 ------EDQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +D+NL+ F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + LL S+ EP++ FFD V+V V++ ++ NRL+ LQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLAHLQRLQELLQGVADI 685 >gi|313888907|ref|ZP_07822567.1| glycine--tRNA ligase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845080|gb|EFR32481.1| glycine--tRNA ligase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 576 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 199/603 (33%), Positives = 323/603 (53%), Gaps = 63/603 (10%) Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 +++K I+P I+ + +PK+MRW + + RP++ ++ +L +K+++ D + Sbjct: 14 EIIKEIIPGLIKDINFPKNMRWGGKN-----IRFARPIRWVVSLL-----NDKVVEFDFE 63 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I NIT GHRF IK+ +++Y + LE+ V+LD RR I ++ ++A ++G Sbjct: 64 GIQVSNITKGHRFLGSSEIKIDKVENYEKLLEDNYVILDQNKRREIIKYESTKIAKSLGG 123 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 E+ E++DLLEE+ +VE+ GS +KYL LP+E++ T+ + + +++G L Sbjct: 124 EIHENEDLLEELTYIVEYPTPIKGSIKEKYLSLPKEVVTTTMIDHLRFTPIYSQDGGLLP 183 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI V N D ++ GN +V+ ARLEDA F+ D + Sbjct: 184 YFITVRN-GTRDYEDIVIAGNEKVLGARLEDAKFFYDDD--------------------I 222 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLS 418 SKPL + L+ V+FH K+GT E+ R V+ KIA+ D + + R LS Sbjct: 223 SKPLVDYVENLN--GVLFHDKLGTMLEKEKRDGVVANKIAESLSFADEAIDAIKRVAHLS 280 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EF ELQG IG+ YA+ E AI E P+ + +P + + S Sbjct: 281 KADLTTKMVIEFTELQGVIGEIYALKSGEKEIVATAIREQYLPKFAGDKLPESSVGSIFS 340 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--------LENKIDIPLSQFIE 530 LADK+DT+ +AI E P+GS DP+ALRR+ +G+I II L+ ++ L ++I Sbjct: 341 LADKIDTIAGLFAIGEIPTGSTDPFALRRSAIGVINIIRNNSWKFNLDEAVEASLYEYIN 400 Query: 531 DQNLIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 D L FF R+K L D IR+D+I+++L PE++ + I D K LNE Sbjct: 401 DLGLTFNHEEVIANVRDFFLGRIKTMLQDEGIRYDIIDSVLIPESE-IHNIFDKAKELNE 459 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 +F + KF+ + RI + KN ++ LE+ L+ EAEK LY + + Sbjct: 460 WFKEDRS-KFVDAYNRINNL-----TKNVDL-LEVKEDLLVEEAEKDLYMKYLEIDGSFK 512 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 E++ ++Y + DLL+ + I+ FFD V+V +D +VR+NRL L+ I+ I ++ ++ Sbjct: 513 EALAEEKYMEAMDLLNDLVPSIDKFFDNVMVMAEDDKVRENRLGLINRIEENIQKILKIE 572 Query: 700 KIV 702 IV Sbjct: 573 NIV 575 >gi|220932081|ref|YP_002508989.1| glycyl-tRNA synthetase, beta subunit [Halothermothrix orenii H 168] gi|254781853|sp|B8CXH5|SYGB_HALOH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219993391|gb|ACL69994.1| glycyl-tRNA synthetase, beta subunit [Halothermothrix orenii H 168] Length = 686 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 221/731 (30%), Positives = 371/731 (50%), Gaps = 82/731 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EE+PA + K DL + I L+++ + ++ + + TP RL L++K L+ Sbjct: 4 DLLFEIGTEEMPAGLIGKIRSDLKDLAINTLEDKRLDFKECKVFSTPRRLVLFVKELAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 EK E GP G +A GF R+ G++ + D IK D VY+ + + Sbjct: 64 QEEKREVVKGPARSIAFEDDGTPTRAAKGFSRAQGVE-VDDLIIKDDY----VYVEKIEQ 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +LK I+P I K+P P+SMRW+ + F +IRP++ +L + E+I Sbjct: 119 GQD-TAGLLKDILPGLINKLPLPRSMRWADYN-----FKFIRPIRWLLALF-----GEEI 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + G T GHRF ++V+ DHY +E+ +++D RR IL + Sbjct: 168 ISFSMAGVQSGAYTRGHRFLVKDRLEVKDPDHYFDVMEKGYIIVDHNKRRELILKQIREI 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +G +VED DLL E++ LVE+ F G FD+ YL LP++++ ++ +Q+ F Sbjct: 228 EKEIGKVMVED-DLLTEVVDLVEYPTAFYGKFDRSYLELPDDVLITSMAEHQRYFPVIDE 286 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L+ F+ V + D + GN V+ ARL DA F Sbjct: 287 DGSLSPYFVGVRD-GIEDYIEEVRYGNEMVLRARLADARFF------------------- 326 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 F DL +++R L+ ++VF +G+ ++V R++ L +I + L ++ + + Sbjct: 327 -FEEDLKVSIEERQKELE--EIVFQEDLGSMMDKVKRLKQLVIQIGKSLNLKESQLQSLI 383 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSK DL TE+V EF +LQG +G+EYA++ E+ AI E PR + +P Sbjct: 384 RAAELSKNDLVTEMVNEFTKLQGVMGREYALINGEDEEVATAIYEQYLPRYSGDRLPQTL 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 +S+ADK+D + + +++ PSGS+DP+ALRR GI+ II++ ++ + LS + Sbjct: 444 YGRILSIADKIDNITSHFSLGMIPSGSQDPFALRRQANGIVNIIIDAQLPLKLSSLLNWS 503 Query: 531 -------DQNLI----LFFHDRLKLYLHDRDIRHDLIEAILRPEND---NLLTIVDLIKH 576 D++ + F RL+ L +R IR+D+I +++R +D N+L+ + + Sbjct: 504 IEVLEPGDKDFVNEEKSFLLQRLETILDERGIRYDIINSVVRVGDDDPNNILSRAEAVMS 563 Query: 577 LNE-----FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L + F +G L+ A+ LA + + N +I+P+Y EK LY + Sbjct: 564 LRKENPDLFVDLIQG---LVRARN----LASKGEGNN----DINPEYFECREEKELYDIY 612 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 IQ K Y L + EP++ F D V+V V+D +++NRL+LLQ I N+ Sbjct: 613 RKIKDEIQRQFKKKNYLSGLKKLVDVKEPVDNFLDNVVVMVEDERIKNNRLALLQEISNL 672 Query: 692 ILIVINVQKIV 702 + V+N+ +I Sbjct: 673 VSGVMNISEIA 683 >gi|127510944|ref|YP_001092141.1| glycyl-tRNA synthetase subunit beta [Shewanella loihica PV-4] gi|166227926|sp|A3Q8T4|SYGB_SHELP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|126636239|gb|ABO21882.1| Glycine--tRNA ligase [Shewanella loihica PV-4] Length = 689 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 222/714 (31%), Positives = 353/714 (49%), Gaps = 61/714 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + AE L++ + Y++ Y P RL L + L Sbjct: 5 NLLIEVGTEELPPKSLRTLAESFLANFEEELQKAELSYESATWYAAPRRLALKVNALVTA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++ D KG+ L + Sbjct: 65 QADKVVEKRGPAIAQAFDADGNPTKAAMGWARGNGITVEQAERLTTD--KGEWLLHKAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + + +IRP+ ++ ++ +++ Sbjct: 123 VGVETKSLVAEMAQRALDKLPIPKPMRWGSNKT-----QFIRPVHTVTMLM-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I +L I GHRF +++ D+Y+ LE + V+ D + R I DA Sbjct: 173 IPGELLGIESARTIRGHRFMGVDTLELDHADNYLTALETQGKVMADYQARMAIIKADAQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G D+DLLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 233 AADAMGGIAEIDEDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI VSNI++ D A I+ GN +VV RL DA F++ D+ + Sbjct: 293 KAGTLLPHFIFVSNIESKDP-AQIIAGNEKVVRPRLADAEFFFETDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+A L+ VVF ++GT +RV RI L IAQ I AD RA Sbjct: 341 ---------SLESRLASLET--VVFQQQLGTIKDRVERISALAAFIAQGIGADSEQAGRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+EE KP+ ++VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLDGETEAVALALEEQYKPKFSGDSVPTQPIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 I+V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RI +EN + + L +Q Sbjct: 450 ISVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRICVENNLPLDLVDLVAKAQE 509 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + F R + + D+ I D+I A+L + IK + Sbjct: 510 LHGANLSNADTAEQVLEFLMGRFRAWYQDQGISVDVILAVLARRPTSPADFDSRIKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + KR+ ILA K +I+ +I L AE+ L + +++ ++ Sbjct: 570 FRSLEQAAALAAANKRVSNILA---KVEGDIASDIDSNLLQESAEQALASKLNELQPQLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y Q LL S+ E ++ FF+ V+V DD ++ NRL+LL ++ L Sbjct: 627 PLFANADYQQALALLASLRESVDTFFEDVMVMADDEALKQNRLALLSKLRAQFL 680 >gi|71281166|ref|YP_266788.1| glycyl-tRNA synthetase subunit beta [Colwellia psychrerythraea 34H] gi|123761120|sp|Q48AS2|SYGB_COLP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71146906|gb|AAZ27379.1| glycyl-tRNA synthetase, beta subunit [Colwellia psychrerythraea 34H] Length = 688 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 206/716 (28%), Positives = 349/716 (48%), Gaps = 60/716 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+E+ +EE+P + A + G L + Y +++ + TP R + + L Sbjct: 7 LIELGTEELPPKSLKTLATAFYDNIKGQLDSHNLSYSDIKWFATPRRFAVQVFDLVEKQD 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 +KI E+ GP V G KA G+ RS G++ D + KG+ L Sbjct: 67 DKIVEKRGPAVNVAFDDAGNASKAAQGWARSNGIEV--DQAERLVTGKGEWLLHRATVSG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +++ +V A+ K+P K MRW + +IRP+++ L +L D II Sbjct: 125 KAVVELIPDMVTTALNKLPIAKPMRWGAERT-----QFIRPVQT-LTMLFGSD----IIA 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + N GHRFH + + + Y +L +A V +D R+N I+ ++A+ Sbjct: 175 GEALGVSSSNQVQGHRFHHEGLVTINHANDYQAELAKAYVEVDFNERQNKIVAQIKQVAN 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + D++LL E+ LVEW +G+FD+ +L +P E + ++K +QK F + G Sbjct: 235 DIDAVALIDEELLNEVTALVEWPVTLVGTFDEDFLNVPAEPLIYSMKDHQKYFPVTDKNG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI V+NI++ D I+ GN +V+ RL DA F+K D+ Sbjct: 295 QLVNKFIFVTNIESKDPNT-IIFGNEKVIRPRLADAEFFFKTDK---------------- 337 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 + L+ R+ L+ V+F ++GT + RI L + IA+ ++ + RA +L Sbjct: 338 ----KQSLESRLKSLE--SVLFQKQLGTLKAKSERIASLSQFIAEQLNENAQDAYRAGLL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +++V EFP++QG +GK YA+ EN + A+E+ +PR +++P I V Sbjct: 392 SKTDLMSDMVLEFPQVQGTMGKYYALHDGENENIAQALEDQYRPRFAGDSLPEANIGCAV 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +++DK+D+L+ + IN+ P G KDP+ALRRA +G IRII+E ++D+ LS I Sbjct: 452 AISDKIDSLVGIFGINQAPKGDKDPFALRRAAIGSIRIIIEKQLDLDLSTLINKSIELFG 511 Query: 533 ----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +++ F R + + ++ I D+I+A+L + L IK + F Sbjct: 512 DKLVNENTATDVLEFIMGRFRAFYQEQGISVDVIQAVLAKKPSAPLDFEKRIKAVTFFGE 571 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + + KR+ ILA K + E+ + +AE+ L + D + M Sbjct: 572 LPEAATLAAANKRVGNILA---KFDGELYQSFNTDLATEQAERDLADIYRDISLKVAPLM 628 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 K Y L + PI+ FFD V+V DD V+ NRL+LL I+N + ++ Sbjct: 629 ADKNYQAALSELAQLKAPIDTFFDGVMVMSDDEAVKINRLTLLNQIRNSFFAIADI 684 >gi|296313940|ref|ZP_06863881.1| glycyl-tRNA synthetase, beta subunit [Neisseria polysaccharea ATCC 43768] gi|296839480|gb|EFH23418.1| glycyl-tRNA synthetase, beta subunit [Neisseria polysaccharea ATCC 43768] Length = 687 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 338/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGVPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HRLIVLHGGD-----IVNVSVLGLQSGNQTLGHRFLSDGEITIENADSYAEQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+ L+ W I P+G KDPYALRRA+LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLEILVGIWGIGLIPTGDKDPYALRRASLGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + S KR+ +L KK E+ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAASNKRVQNLL----KKADAALGEVDESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|253699299|ref|YP_003020488.1| glycyl-tRNA synthetase subunit beta [Geobacter sp. M21] gi|259511925|sp|C6E0B4|SYGB_GEOSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|251774149|gb|ACT16730.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. M21] Length = 687 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 213/725 (29%), Positives = 345/725 (47%), Gaps = 69/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LEI EEIPA KA D+ +++ + Y + TP RL L +KG++ Sbjct: 4 DLFLEIGCEEIPAGFVPKAMADMELLIKKEFDSARIEYGEIVTLGTPRRLVLAVKGVAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P+ +GP G KA GF R G+ Q+K +KG+ AV Sbjct: 64 QPDAELTAMGPAKSHAYDADGNPTKAAQGFARGQGIDV---SQLKLVTTEKGEYLAAVKS 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L ++P I +P+ KSMRW+ + RP+ I + K Sbjct: 121 EIGRETAELLPEMLPRLIGNIPFKKSMRWADFD-----VRFARPIHWIAALF-----DGK 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I G+ + GHRF A P V+ L HY+ + E V+ DP R+ I + R Sbjct: 171 VVPFSFGNIDSGSASRGHRFMANTPFPVRDLAHYLEECERHFVIPDPNKRKEIIRAEIER 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ D+ LLE++ LVE+ G+F +L +P E++ +++ +Q+ F Sbjct: 231 VAKQAKGNVLPDEALLEQVSYLVEYPSAVHGTFSPDFLVVPREVLITSMREHQRYFSLVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI ++N D +V+GN RV+ ARL DA F+ D+++ L + ES Sbjct: 291 DEGKLLPGFITINNTITEDP-QVVVKGNERVLRARLSDARFFF--DEDHKVRLETRVES- 346 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + VV+ AK+GT E++ R R LGK++AQ ++ V V+R Sbjct: 347 -------------------LKSVVYQAKLGTSYEKMERFRELGKRLAQRLNPSVIKQVER 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL + +V EFPE+QG +G+EYA+ E + +AI EH P +P + I Sbjct: 388 AATLCKADLVSGMVGEFPEVQGIMGREYALHDGEEPAVANAIAEHYLPTQAGGELPASDI 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 VSLADK+DT+ + + P+GS DPYALRR+ LGII IILE PLS+F++ Sbjct: 448 GAFVSLADKMDTICGCFCVGLIPTGSADPYALRRSALGIINIILEKGYREPLSEFVKASL 507 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++++ FF R + DR D +EA+ D+L+ I+ Sbjct: 508 DLLAAKATRPLAEVQKDVLDFFRGRFVNLMADR-FPSDAVEAVASVSFDDLVEAAAKIEA 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L F + ++ KR+ I+ + +S + AE L+ ++ Sbjct: 567 LAGFRNRDDFGPLAVAFKRVCNIV------KDGVDTPVSAELFQDAAEGELHQALTQVSG 620 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + +++ Y + ++ +++FF++V+V DD VR NRL+LL I + + Sbjct: 621 KVADALKKADYLAALTEIATLKPAVDLFFEKVMVMADDERVRQNRLALLTGIARLFASLA 680 Query: 697 NVQKI 701 + ++ Sbjct: 681 DFSRL 685 >gi|77358988|ref|YP_338563.1| glycyl-tRNA synthetase subunit beta [Pseudoalteromonas haloplanktis TAC125] gi|123730516|sp|Q3IJ28|SYGB_PSEHT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|76873899|emb|CAI85120.1| glycyl-tRNA synthetase, beta subunit [Pseudoalteromonas haloplanktis TAC125] Length = 689 Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 213/721 (29%), Positives = 346/721 (47%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L + L Sbjct: 5 NLLVEIGTEELPPKALRKLAEAFAANLTAELETLELAHQGVSWYASPRRLGLRVIALDAK 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP + A KA G+ R G++ + D Q + KG L + + Sbjct: 65 QQDKEVEKRGPAIKAAFDADGNPTKAAMGWARGCGIE-VKDAQTL-ETDKGAWLLHLAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ ++ A+ K+P PK MRW + +IRP+ ++ +L +++ Sbjct: 123 AGQETKTLMVDVINKALAKLPIPKPMRWGANKT-----QFIRPVHTVTILL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 173 VTGEVLGKQVSNQLQGHRFHHPEKITINHADDIFDVLKSAYVIADYEQRKAQIRAQIEAA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+ + D+DLLEE+ LVEW +F++++L +P E + T+K +QK F + Sbjct: 233 AKAINAVVAMDEDLLEEVTSLVEWPVTLTATFEEEFLAVPAEALIYTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F+ VSNI++ D + ++ GN +VV RL DA F++ D+ Sbjct: 293 NGKLLNKFLFVSNIESKDP-SVVISGNEKVVRPRLADAQFFFESDKK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ R+ LD V+F ++GT ++ +RI L IAQ + AD L RA Sbjct: 339 -------KTLESRLESLD--SVLFQKQLGTLKDKSARISELAGYIAQQLGADKELAQRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EF ++QG +G YA E A E PR +++PTN IS Sbjct: 390 LLSKTDLMTEMVMEFTDIQGVMGMHYARFDGEAEDVALAQNEQYMPRFAGDSLPTNLISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + + + + Sbjct: 450 AVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKELPLDILDLVAKSQTL 509 Query: 536 L---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F R + + D I D+I+A+L + +K ++ F Sbjct: 510 FGDKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKAVSHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILA---IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + E + KR+ ILA I + N + SL L +AEK L A ++ F T Sbjct: 570 RTLDAAEALAAANKRVSNILAKNDITSEGNVDESL------LTDDAEKVLAAQVAKFATE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + Y + L I + ++ FFD V+V DD V+ NRL+LL + + L + + Sbjct: 624 LAPLYASGNYQEALSQLAGIRQSVDSFFDNVMVMADDEAVKQNRLALLSQLSGLFLGIAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|303250056|ref|ZP_07336258.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253488|ref|ZP_07535359.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651119|gb|EFL81273.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859167|gb|EFM91209.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 689 Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 217/722 (30%), Positives = 359/722 (49%), Gaps = 67/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 172 LIEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D AI++GN +VV RL DA F+K Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFFFK--------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +R Sbjct: 336 -----TDLKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRR+ LG +RII+E + + L + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRSALGSLRIIVEKNLPLDLEDLVRKSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 ALFGNKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA--VISDFGT 636 F + E + KR+ ILA K EIS+EI + LL+EAE++ A VIS T Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISIEID-RTLLVEAEEKALAEQVIS-LQT 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V Sbjct: 624 ELAPTFANGEYQTALDHLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|171464147|ref|YP_001798260.1| glycyl-tRNA synthetase, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193685|gb|ACB44646.1| glycyl-tRNA synthetase, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 712 Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 214/733 (29%), Positives = 363/733 (49%), Gaps = 67/733 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSP 61 L+E+++EE+P + + + S + LK G+ ++ + + TP RL + + + Sbjct: 13 LLIEVFTEELPPKSLRRLGDAFSEGIFAALKSAGLATKSSKVTGFATPRRLAVQVTDVLD 72 Query: 62 HSPE-KIEERLGPRVGA---GKKAIDGFLRSTGLQTISDCQIKKDPKKGD-----VYLAV 112 +P+ + E+L P A KA L+ +D + K G+ +YL V Sbjct: 73 QAPDFPVREKLLPTSNAFDAEGKATAPLLKKLSALGYADVDLSSLEKAGEGKNEALYLNV 132 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTH--SPISAFSWIRPLKSILCILVAED 170 + K L E + + + K+P K M + ++ + RP I+ + Sbjct: 133 IAKGAAL-EQTAQVALEQTLNKLPIAKMMHYQVPQKDGQLADVQFARPAHRIIAL----- 186 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 + I+++ I GN T GHRF AP + + + + Y DL+ ++ +R A + Sbjct: 187 HGDTILNISALGIHAGNKTEGHRFLAPGNVAIGNANQYESDLQSKAKVIPSFNQRRAKIE 246 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A A+ L L+ D LL+E+ LVEW ++ FD+++L +P+E + LT++TNQK F Sbjct: 247 AAILKAAGDDLVLMPD-SLLDEVTALVEWPAIYECHFDQEFLEVPQECLILTMQTNQKYF 305 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 R+G L N F++VSNI+ ++ AI+ GN RVV RL DA F+++DQ Sbjct: 306 ALTDRQGKLRNRFLIVSNIE-TNKPNAIISGNERVVRPRLSDARFFFQQDQK-------- 356 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 +PL R+A L VV+H ++G Q +R R++ L IA+ ++AD L Sbjct: 357 ------------RPLASRVANLG--KVVYHNQLGNQLDRTRRVQGLTVGIAKKLNADEKL 402 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA ++K DL T +V EFPELQG +G+ YA EN A EH P+ + +P Sbjct: 403 ASRAAEIAKTDLLTNMVGEFPELQGIMGRYYATHDGENADVASACSEHYMPQFASDALPQ 462 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +++ADKL+TL+ W + P+G+KDPYALRR LGI R++LE + + L + IE Sbjct: 463 TQTGTILAIADKLETLVGIWGVGLAPTGNKDPYALRRHALGICRLLLEKNLSLSLPELIE 522 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDL-----IEAILRPENDNLLT 569 ++ F DRL+ YL D+ + I+A+L E L Sbjct: 523 LSRAQFPQADVQEKAKAADIYAFIIDRLRAYLRDQSVAGKAFTSAEIDAVLSQEPAQLND 582 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +++ + L EF + A+ + + KRI IL +K I + S + L + AE L+ Sbjct: 583 LIERLTALREFNALAEAAQLAAANKRISNIL---KKTTTAIPVTCSAKLLQIPAETALHQ 639 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + + +++ ++ L ++ PI+ FF V+V + E+RDNRL+LLQ + Sbjct: 640 ALETVAPALNAAYEKRQFVELLRSLVALSGPIDQFFADVMVMDPNSELRDNRLALLQQLH 699 Query: 690 NIILIVINVQKIV 702 + +V ++ K+ Sbjct: 700 QKMNLVADLGKLA 712 >gi|167031097|ref|YP_001666328.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida GB-1] gi|189082270|sp|B0KF22|SYGB_PSEPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166857585|gb|ABY95992.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas putida GB-1] Length = 683 Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 210/715 (29%), Positives = 343/715 (47%), Gaps = 59/715 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ L Sbjct: 5 DFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK----PKR 118 P++ GP + A K DG L C ++ + D A LR P + Sbjct: 65 QPDRSINIDGPPMQAAFK--DGEPTQAALGFAKKCGVEL--AEIDQSGAKLRFSQHIPGK 120 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 +L TI+ ++ +P PK MRW+ + ++RP + ++ +L ++++D Sbjct: 121 ATASLLPTIIEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----GDQVVDC 170 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + G + GHRFH P + + + +Y+ DL +A VL D RR I LA Sbjct: 171 TILSQKAGRESRGHRFHHPENVVITTPANYVEDLRKAYVLADFAERRELISKRTAELAMQ 230 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 + LL+E+ LVEW + SF++++L +P+E + T++ NQK F EG Sbjct: 231 QEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDSEGK 290 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 291 LLPRFITVANVESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK---------------- 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 +PL+ RL +VVF A++GT ++ R+ L IA LI D RA +LS Sbjct: 334 ----QPLETFNERLK--NVVFQAQLGTVYDKAERVSKLAAFIAPLIGGDAQRAGRAGLLS 387 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL TE+V EFPE+QG G YA+ E A+ E PRG +P V+ Sbjct: 388 KCDLATEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTLTGAAVA 447 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 +ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 448 IADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLTGAVEFAVKQFGA 507 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + ++ F DRL+ D I ++ + + L ++ + F Sbjct: 508 KVKAAGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAVQAFRKL 567 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E KR+ +L+ K I+ ++ P+Y E LY+ I +Q Sbjct: 568 PEAEALAAVNKRVSNLLS---KAEGAIAEQVEPKYFDNANEFSLYSAIQQADQAVQPMAA 624 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V ++ Sbjct: 625 ARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADI 679 >gi|325695192|gb|EGD37093.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK150] Length = 679 Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 216/714 (30%), Positives = 361/714 (50%), Gaps = 88/714 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDSDGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EVGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIVSADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENSAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRSIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS- 632 ++ A+ + F + + + ++ + EK + + ++P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLAAAIEK 615 Query: 633 -DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + ++D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTPDLAANLDQ---------LFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|254428435|ref|ZP_05042142.1| glycyl-tRNA synthetase, beta subunit [Alcanivorax sp. DG881] gi|196194604|gb|EDX89563.1| glycyl-tRNA synthetase, beta subunit [Alcanivorax sp. DG881] Length = 690 Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 217/726 (29%), Positives = 352/726 (48%), Gaps = 74/726 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + + L+ + L E G+ + N+ ++ P RL L ++ L Sbjct: 4 DLLIELGTEELPPKALASLSAALTDEFVRQLDEAGLNHGNVERFAAPRRLALLVRDLDEK 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ ER GP V A KA GF S GL D ++D KG+ +A + + Sbjct: 64 QADRDIERQGPAVQAAFDSDRNPTKAAQGFAASLGLTV--DQLGRQDTGKGERLVAQITE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ AIQK+P PK MRW ++RP ++ + +++ Sbjct: 122 KGKSAAELVPAFFTQAIQKLPIPKRMRWGKRK-----VQFVRPAHWLVALF-----GDEV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I +L ++ G +YGHRFHAP I + + Y + +E+ +L RR A++ + Sbjct: 172 IPFELLDLQSGRTSYGHRFHAPGAIDLATAGEYAQRIEQDGHVLADFDRRKAMIEEQTLA 231 Query: 236 AS--AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A A G+ + D DLL E+ LVEW + MGSFD +L +P+E + ++ +QK F Sbjct: 232 AGKKAGGVAQI-DPDLLNEVTALVEWPEALMGSFDDDFLRVPQEALISAMEEHQKYFSVL 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI +SNIQ+ D ++ GN +V+ RL DA F+ D Sbjct: 291 DADGKLMPRFITISNIQSKDP-QQVIHGNEKVIRPRLADAAFFYDND------------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 + L Q L +VVF ++GT ++ RI L IA I + Sbjct: 337 -------CKRTLAQHAEGL--ANVVFQQQLGTVADKCQRIGSLAAVIAGQIGGNADNAKL 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A LSKADL +E+V EF +QG +G A + + A+ E PR + +P +K Sbjct: 388 AGELSKADLNSEMVGEFDTMQGIMGFYLAQREGQPDDVAKALYEQYLPRFAGDTLPQSKT 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 + VSLADK+DTL+ + I +KPSG+KDPYALRRATLG++RII+EN++ + L + ++ Sbjct: 448 GMAVSLADKIDTLVGIFGIGQKPSGTKDPYALRRATLGVLRIIIENELALDLRELLDQAA 507 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLI-------EAILRPENDNLLTIVD 572 D N + F R + ++ I +I EA +P L Sbjct: 508 AQLGERIDANQVEDAFDFIKGRYRAIYQEQGIATPVILSVLAIDEACRKP-----LDFDR 562 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 +K + F + + + KR+ ILA K + EI L EAE+ L ++ Sbjct: 563 RVKAVAAFQQREEAQALAAANKRVSNILA---KLDSAPPEEIDGALLEDEAEQTLTNMVV 619 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 E ++ Y + ++L + EP++ FFD V+V +D VR+NRL+LL +++++ Sbjct: 620 AAFEQSYELLEAGDYASVLEMLADLREPVDAFFDTVMVMAEDEAVRNNRLALLAFLRDLF 679 Query: 693 LIVINV 698 L V ++ Sbjct: 680 LNVADI 685 >gi|221065032|ref|ZP_03541137.1| glycyl-tRNA synthetase, beta subunit [Comamonas testosteroni KF-1] gi|220710055|gb|EED65423.1| glycyl-tRNA synthetase, beta subunit [Comamonas testosteroni KF-1] Length = 704 Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 214/727 (29%), Positives = 363/727 (49%), Gaps = 89/727 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + ++ LK +G++ + Y +P RL +++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAAVIFEQLKAQGLLASTESRLTAYASPRRLAVHITEV 64 Query: 60 SPHSPEK-IEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 P + +K + ++L P + L + G T + + + +A L++ Sbjct: 65 LPQAEDKAVSQKLMP--------VSVALDAEGKPTAALLKKLAALGADESAVAALKRQGE 116 Query: 119 ---------------LIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPISAFSWIR 157 L+ D ++ + A+ K+P PK MR W++ H ++R Sbjct: 117 GKAEALFYESTAKGVLLTDGVQKALDEALAKLPIPKVMRYQLQDGWTSVH-------FVR 169 Query: 158 PLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEA 215 P ++ + + +I + + G T+GHRF A P+ +Q+ D Y L EE Sbjct: 170 PAHGLVVL----HGTQVLIGVKALGLTAGAATHGHRFEAAVDPVVIQNADSYAEQLREEG 225 Query: 216 MVLLDPECRRNAILNDAHRLASAVGLELV--EDKDLLEEIIGLVEWVQVFMGSFDKKYLC 273 V+ RR I A +G ++ +D LL+E+ LVE V + F+K++L Sbjct: 226 AVIASFTERRADIARQLQAAAERIGGGVIPIDDPALLDEVTALVERPNVLVCEFEKEFLA 285 Query: 274 LPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDA 333 +P+E + LT+K NQK F G L + F++VSNIQ D +A+V GN RVV RL DA Sbjct: 286 VPQECLILTMKANQKYFPLLDANGKLTHQFLIVSNIQPQDA-SAVVGGNERVVRPRLADA 344 Query: 334 LHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI 393 F F+ D K L R+ +LD VV+H K+GTQGER++R+ Sbjct: 345 KFF--------------------FDQDRKKTLASRVEQLD--KVVYHNKLGTQGERIARV 382 Query: 394 RVLGKKIAQ-LIDADVA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R + K IAQ L ++++ L D+A +L+K DL T++V EFPELQG +G+ YA +++ Sbjct: 383 RAIAKSIAQQLGNSELGRLADQAAMLAKTDLVTDMVGEFPELQGIMGRYYAQNDGLDVAV 442 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 DAIE+H KPR + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG Sbjct: 443 ADAIEDHYKPRFAGDELPRGDVGVIVALADKLETLVGMFGIGNLPTGDRDPFALRRHALG 502 Query: 512 IIRIILENKIDI--------PLSQF---IEDQN--LILFFHDRLKLYLHDRDIRHDLIEA 558 +IR+++E +++ L F I+D L+ F +DRL ++ +EA Sbjct: 503 VIRMLVEKDLELDLETLLVSTLPAFGDKIQDATPQLVEFIYDRLANMFREQGYSAQEVEA 562 Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY 618 +L + L + ++ + F + + + KR+ IL +K ++ +++ Sbjct: 563 VLALQPQRLSDVQKRLEAVRAFATLPEAPALAAANKRVGNIL---KKAEADVQPQVNDAL 619 Query: 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 LL +AEK LYAV+ Q+ Y L ++ ++ FF+QV+VN +D ++ Sbjct: 620 LLEQAEKDLYAVLQQVAPKAQQQFAAGDYTASLQTLAALRASVDAFFEQVMVNAEDPALK 679 Query: 679 DNRLSLL 685 NRL LL Sbjct: 680 ANRLGLL 686 >gi|260914511|ref|ZP_05920980.1| glycyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] gi|260631612|gb|EEX49794.1| glycyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] Length = 689 Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 215/720 (29%), Positives = 354/720 (49%), Gaps = 63/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVELELNQAGLTFDKVEWFAAPRRLAVKVLGLATS 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ +I D + V+ A + Sbjct: 65 QPSKQIEKRGPAVSAAFDSEGKPTKAAEGWARGCGINVEQAERIATDKGEWLVHRATIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++LK IV A+ K+P PK MRW+ +IRP+ ++ +L ++ Sbjct: 125 QPTK---NLLKDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ + G GHRF H ++ D Y L+E V+ D R+ IL A Sbjct: 172 LIEGEILGVTSGTTIRGHRFLGEHEFQISHADQYPALLKEKGSVVADFNERKALILAKAQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI VSNI D + I++GN +VV RL DA F Sbjct: 292 DKEGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F DL + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD R Sbjct: 334 ---FKTDLKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + V+LADK DTL + I ++P GS DP+ALRRA LG++RII+E + + L + ++ Sbjct: 449 ASAVALADKFDTLTGIFGIGQQPKGSADPFALRRAALGVLRIIVEKNLPLDLEEIVKKSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + ++ F R + + D I D+I+++L ++ ++ Sbjct: 509 ALFGDRLTNANVVEEVVDFMLGRFRAWYQDEGIAVDVIQSVLARRPTKPSDFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K E+ I + EK L + + Sbjct: 569 HFRTLEAAEALAAANKRVSNILA---KVEGELPATIDTVLCVENTEKVLAEQVIALQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y D L ++ EP++ FFD V+VNV+D+++R NRL++L ++N+ L V ++ Sbjct: 626 TPLFAKGEYQVALDRLAALREPVDTFFDNVMVNVEDQKLRQNRLAILNNLRNLFLQVADI 685 >gi|90408448|ref|ZP_01216608.1| glycyl-tRNA synthetase beta subunit [Psychromonas sp. CNPT3] gi|90310432|gb|EAS38557.1| glycyl-tRNA synthetase beta subunit [Psychromonas sp. CNPT3] Length = 688 Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 220/720 (30%), Positives = 350/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE + + L + + ++ + +P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAEAFADNVRARLIDAELSFEKVDWLASPRRLAVVVTQLTDA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ RS G+ ++ D KG+ L Sbjct: 65 QADKVVEKRGPAVSVAFAEDGTATKAAEGWARSNGISVEQAQRLVTD--KGEWLLFKSEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +IV A+ K+P PK MRW + S+ +IRP+ + LCIL + Sbjct: 123 KGKEVAQLLPSIVADALAKLPIPKPMRWGS-----SSIQFIRPVHT-LCILFGN----TL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I +L + I GHRF ++ D Y LE V++D R+ I Sbjct: 173 IPAELLGVKSTRIIRGHRFMGESEFNIEHADDYAELLETRGKVIVDYVRRKAIIRTQVEV 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LASA D+ LLEE+ LVEW +GSF++KYL +P E + T+K NQK F Sbjct: 233 LASAENGVADIDEALLEEVTALVEWPVTLIGSFEEKYLAVPSEALIYTMKDNQKYFPVID 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI+++D + +VQGN +VV RL DA F Sbjct: 293 KKGNLLPRFIFVSNIESTDP-SQVVQGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F D K L R+ L V+F ++GT E+ +RI + +KIA LI+AD RA Sbjct: 334 --FATDKKKTLASRVELLS--SVLFQKQLGTLKEKSARIANIAEKIALLINADAKHAQRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSKADL TE+V EFP++QG +G YA E+ + A+ E PR + +PT+ ++ Sbjct: 390 GWLSKADLMTEMVLEFPDVQGVMGMYYARFDGEDEAVAIALNEQYLPRFSGDKLPTSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN- 533 VSLADKLDTL+ + I + P G+ DP+ALRRA +G++RII + ++D+ + E N Sbjct: 450 CAVSLADKLDTLVGIFGIGQAPKGAADPFALRRAAIGLLRIIKDKELDLDIVALAELANV 509 Query: 534 --------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + +LI+++L + I+ + + Sbjct: 510 EYGEKLSNKNVVTEVVDFLFARFRATYQANGFSAELIQSVLARRPTKPVDFEKRIQAVAK 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KRI ILA K I+ EI + AE L +S + Sbjct: 570 FHALPEAAPIAAANKRISNILA---KVKTPINAEIDADLFVEPAETALAQKLSTLELKLS 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y L S+ P+++FF+ V+V D+ ++ NRL++L ++++ L V +V Sbjct: 627 PLFEKGDYESALFELASLQAPVDLFFENVMVMADNDAIKQNRLAILSRLRDLFLKVADVS 686 >gi|54294727|ref|YP_127142.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Lens] gi|53754559|emb|CAH16043.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Lens] Length = 688 Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 198/702 (28%), Positives = 352/702 (50%), Gaps = 60/702 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ + +I+ D KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCGVTVDALTKIQTD--KGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V ++++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSLSLESLPITKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 LG-----VTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + FI VSNI AS +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLHYFITVSNI-ASSNPKQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 338 -------QPLSAHIPSTE--QVIFQVKLGSMYDKVQRIKAMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAIVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 +SLAD++DTL +AI +KP+G KDP+ LRR L ++R+++ + LS I Sbjct: 449 ALSLADRIDTLAGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 530 ------EDQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +D+NL+ F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA N+++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYANKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 Y + LL S+ EP++ FFD V+V V++ ++ NR Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNR 668 >gi|34497111|ref|NP_901326.1| glycyl-tRNA synthetase subunit beta [Chromobacterium violaceum ATCC 12472] gi|34102968|gb|AAQ59332.1| glycyl-tRNA synthetase, beta chain [Chromobacterium violaceum ATCC 12472] Length = 686 Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 219/658 (33%), Positives = 335/658 (50%), Gaps = 62/658 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQI 99 Y +P RL + L G+ P++ R GP AG K A+ GF RS G++ +S+ I Sbjct: 49 YASPRRLAVQLPGVLAVQPDQHITRQGPAAAAGMKDGQPTPALAGFARSCGVE-VSELSI 107 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 + K+ DVY KP + L +V +A++K+P PK MRW S ++RP+ Sbjct: 108 VNNGKQ-DVYAYSSTKPGEALSAQLAEVVSLALKKLPVPKLMRWGD-----SDVQFVRPV 161 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + +K+I ++ + GN T GHRF + + V + D Y R + E+ V+ Sbjct: 162 HGLIML-----HGDKVIAGEVLGLNSGNATRGHRFLSQGEVVVANADAYARVMHEQGKVI 216 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 + RR I + A+ +G + +L +E+ LVEW V F+ ++L +P+E Sbjct: 217 ASFDARRELIRHKLAEAAAKLGATIAAPDELFDEVTALVEWPVVLEAGFEAEFLQVPQEC 276 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F R G L N F+LVSN++ +D + IV GN RV+ ARL DA F++ Sbjct: 277 LILTMQQNQKYFPLLDRNGKLMNRFLLVSNVETADP-SFIVGGNERVLRARLSDAKFFFE 335 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +D+ + LD R+ RL +VV+H KIGTQ ERV R++ + Sbjct: 336 QDKKHR--------------------LDSRLPRL--ANVVYHNKIGTQLERVERLQSIAG 373 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA + AD AL RA L+KADL T++V EFPELQG +G YA E+ A+E H Sbjct: 374 AIAHQLGADAALAARAAYLAKADLVTDMVGEFPELQGIMGMYYAQHDGEHAEVAAAVEGH 433 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 PR + +P KI+ V+LADKL+ ++ W I P+G KDP+ALRRA LG++R+ LE Sbjct: 434 YHPRFAGDTLPEGKIATAVALADKLEAIVGIWGIGLIPTGDKDPFALRRAALGVVRMALE 493 Query: 519 NKIDI--------------PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 +D+ LS + D+ + F DRLK +L D + D I+A+L Sbjct: 494 ADLDLKPLLAIVAEAFPAGKLSANVADE-VFGFMMDRLKNFLA-ADYKGDEIDAVLALSP 551 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L + ++ + F S + + KR+ IL +K EI + L AE Sbjct: 552 SRLNEVRAVLAAVAAFKSLPEAAALAAANKRVNNIL---KKAEGEIG-AVDAALLQEAAE 607 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 + LYA + D ++ + L S+ P++ FFD V+V +D VR NR+ Sbjct: 608 QALYAAVRDLAPAVEVKFAAHDFSGALSQLASLKAPVDAFFDGVMVMAEDARVRANRI 665 >gi|307257903|ref|ZP_07539658.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863590|gb|EFM95518.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 689 Score = 296 bits (758), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 213/720 (29%), Positives = 350/720 (48%), Gaps = 63/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKEIEKRGPAVSAAFDADGKPTKAAEGWARGCGITVDQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 172 LIEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVELPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D AI++GN +VV RL DA F+K Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFFFK--------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +R Sbjct: 336 -----TDLKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLSLDLEDLVRKSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 VLFGDKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISTEIDCTLLVEAEEKALAEQVISLQTEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 626 APTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADI 685 >gi|170719266|ref|YP_001746954.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida W619] gi|229558569|sp|B1J425|SYGB_PSEPW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169757269|gb|ACA70585.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas putida W619] Length = 683 Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 213/717 (29%), Positives = 344/717 (47%), Gaps = 63/717 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ L Sbjct: 5 DFLVELGTEELPPKALATLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK----PKR 118 P++ GP + A K DG L C ++ + D A LR P + Sbjct: 65 QPDRSINIDGPPLQAAFK--DGEPTQAALGFAKKCGVEL--SEIDQSGAKLRFSQHIPGK 120 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 +L TIV ++ +P PK MRW+ + ++RP + ++ +L ++++D Sbjct: 121 ATASLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----GDQVVDC 170 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + G + GHRFH P + + + +Y+ DL +A VL D RR I LA Sbjct: 171 TILSQQAGRESRGHRFHHPQNVVITTPANYVEDLRKAYVLADFAERRELIAKRTTELAMQ 230 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 + LL+E+ LVEW + SF++++L +P+E + T++ NQK F EG Sbjct: 231 QEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDSEGK 290 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+N+++ D IV GN +VV RL DA F+K+D+ Sbjct: 291 LLPRFITVANVESRDP-KQIVSGNEKVVRPRLTDAEFFFKQDKK---------------- 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 +PL+ RL +VVF A++GT ++ R+ L IA LI D RA +LS Sbjct: 334 ----QPLETFNERLK--NVVFQAQLGTVYDKAERVSRLAAYIAPLIGGDAQRAGRAGLLS 387 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL TE+V EFPE+QG G YA+ E A+ E PRG +P V+ Sbjct: 388 KCDLATEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTLTGAAVA 447 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 +ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 448 IADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTPAVEFAVKQFGA 507 Query: 531 -------DQNLILFFHDRLKLYLHDR--DIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + ++ F DRL+ D D+ L L+P + L ++ + F Sbjct: 508 KVKAAGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALKP--GSALDFDQRVQAVQAFR 565 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + E KR+ +L+ K I+ ++ P+Y E LY+ I +Q Sbjct: 566 KLPEAEALAAVNKRVSNLLS---KAEGAIAEQVEPKYFDNANEFSLYSAIQQADQAVQPM 622 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V ++ Sbjct: 623 AAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADI 679 >gi|172056865|ref|YP_001813325.1| glycyl-tRNA synthetase, beta subunit [Exiguobacterium sibiricum 255-15] gi|171989386|gb|ACB60308.1| glycyl-tRNA synthetase, beta subunit [Exiguobacterium sibiricum 255-15] Length = 686 Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 205/706 (29%), Positives = 348/706 (49%), Gaps = 70/706 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 +PAR ++ L + L E + + + + TP RL + + G+S + E G Sbjct: 13 MPARFVLQSETQLKERVTTFLNEARITFDTIESFSTPRRLAVLVTGMSERQTDLEETLKG 72 Query: 73 P--RV-----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 P R+ G KA GF R GL T D ++++ KG Y+ RK L Sbjct: 73 PAKRIAQDEDGNWTKAAQGFARGKGL-TTDDLFLQEE--KGVEYIFATRKESGQETATLL 129 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + ++ + +PK+MRWST + ++RP++ ++ +L +++I ++ ++ Sbjct: 130 PGLKQIVEAMSFPKNMRWST-----QSLRYMRPIRWMIALL-----DDQVIPFEVADVAT 179 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G + GHRF I + + Y+ L V+ E RR I +L+ G E+ Sbjct: 180 GRTSRGHRFLG-QDITILRPNAYVEALAGEHVIASYEQRRQLIEEQIQQLSEQEGFEVPI 238 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D LLEE+ LVE+ G+FD+ YL LPEE++ T+K +Q+ F + ++G L + F+ Sbjct: 239 DPALLEEVTNLVEYPTALFGAFDEAYLELPEEVLITTMKEHQRYFPVK-KDGTLLHYFVT 297 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A+ + +GN +V+ ARL DA F++ D+ + Sbjct: 298 VRNGNATHI-ENVARGNEKVIRARLADAQFFYEEDKK--------------------ADI 336 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 D + ARLD +VFH K+GT GE+V R+R + ++A+ +AD V+RA + K DL ++ Sbjct: 337 DAQAARLD--KIVFHEKLGTTGEKVRRVREMALQLAERFNADSTKVERAGTIYKFDLVSQ 394 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF ELQG +G+ YA ++ E++ AI EH PR + P+ +++ DK+D+ Sbjct: 395 MVYEFTELQGMMGERYANMKGEDVEVAAAIREHYLPRFAGDESPSTPTGTVLAVLDKMDS 454 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------D 531 + F+ + PSGS DPYALRR GI++I+ + +I++ LS+ I+ D Sbjct: 455 VGGFFGVGMIPSGSADPYALRRQAQGIVQILSDRQIEMTLSELIDFVVSAQLKAGLYQAD 514 Query: 532 QNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + FF+ RLK L ++ RHD+IEA L P+ LT+ K + + + Sbjct: 515 AETVKAAMEDFFNQRLKFRLSEKGYRHDVIEAALDPK----LTVEANEKRASMLEQATQQ 570 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 F + +++ ++L I +K E + ++P +AE+ L+ I ++ ++ Sbjct: 571 PTFKKTVEQLSRVLNISKKA--ETVVAVNPALFENDAERDLHEQIEQLIPKVEAAVQASD 628 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 Y Q +L S I +FD ++ DD VR NRLS ++ I Sbjct: 629 YDQAIQVLESSVPAITAYFDGTMIMADDEAVRTNRLSEMKRFATAI 674 >gi|327478621|gb|AEA81931.1| glycyl-tRNA synthetase subunit beta [Pseudomonas stutzeri DSM 4166] Length = 684 Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 215/722 (29%), Positives = 349/722 (48%), Gaps = 66/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + K AE + LK+ G+ + + Y P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALAKLAEAFCAGIEKGLKDAGLGFAKAQAYAAPRRLAVLVEQLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP + G +A GF R G+ +I + K + + Sbjct: 65 QPDRSINLDGPPMQAAFDAHGEPTQAALGFARKCGVDL---AEIDRSGPKLKFSRTIEGQ 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L IV ++ +P PK MRW+ ++RP + ++ + E++ Sbjct: 122 PA---TQLLPGIVEASLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLF-----GEQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID ++ G + GHRFH+P + + Y+ DL A V+ D RR I +L Sbjct: 169 IDCEILAQRAGRESRGHRFHSPGQVHISKPSSYLEDLRGAHVIADFAERRELIAKRVEQL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ASEQNGSAIVPPALLDEVTALVEWPVPLVCSFEQRFLEVPQEALISTMQDNQKYFCLLDA 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 289 NGKLLPRFITVANIESKDP-AQIVSGNEKVVRPRLTDAEFFFKQDKK------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL++ RL +VVF A++GT ++ R+ L IA+ D A RA Sbjct: 335 -------QPLERFNDRLK--NVVFQAQLGTVYDKAERVSRLAGLIAERTGGDKARAMRAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSKADL TE+V EFPE+QG G YA+ + E A+ E PRG +P+ Sbjct: 386 LLSKADLATEMVGEFPEMQGIAGYYYALNEGEPEDVALALNEQYMPRGAGGELPSTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQ 527 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L Q Sbjct: 446 AVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLVEAVNFAIGQ 505 Query: 528 F--------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F + DQ ++ F DRL+ D + ++ + + L ++ + Sbjct: 506 FGTQVKSAGLADQ-VLEFIFDRLRARYEDEGVDVAAYLSVRAVQPGSALDFDQRVQAVQA 564 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + E + KR+ +LA E K E + P++ E LY+ + +Q Sbjct: 565 FRTLPEAEALAAANKRVSNLLAKFEAKLPEA---VEPRWFDNATEFSLYSALQQAEQAVQ 621 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++Y + + L + P++ FF+ VLVN +D VR NR +LL ++ + L V ++ Sbjct: 622 PLAAARQYREALERLAHLRGPVDAFFEAVLVNAEDASVRANRYALLARLRGLFLGVADIS 681 Query: 700 KI 701 + Sbjct: 682 AL 683 >gi|324992006|gb|EGC23928.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK405] Length = 679 Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 217/714 (30%), Positives = 362/714 (50%), Gaps = 88/714 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E++L ++ V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEILPSVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLGKE-TEIASADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 SEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRGIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS- 632 ++ A+ + F + + + ++ + EK + + ++P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLAAAIEK 615 Query: 633 -DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + ++D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTPDLAANLDQ---------LFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|327462421|gb|EGF08746.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1057] Length = 679 Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 217/714 (30%), Positives = 361/714 (50%), Gaps = 88/714 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAQGFVRGKGL-TVGDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ +++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLIVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLGKE-TEIASADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 SEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIGT E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGTLAEHMERTGKIATFLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRGIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS- 632 ++ A+ + F + + + ++ + EK + + ++P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLAAAIEK 615 Query: 633 -DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + ++D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTPDLAANLDQ---------LFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|125624283|ref|YP_001032766.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|229470699|sp|A2RL88|SYGB_LACLM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|124493091|emb|CAL98055.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|300071065|gb|ADJ60465.1| glycyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. cremoris NZ9000] Length = 673 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 233/711 (32%), Positives = 360/711 (50%), Gaps = 77/711 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + L E + + + ++ TP RL L ++ LS Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMEAFLNENRLKFDKIIKFSTPRRLALIVEELS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G T D +K GD Y A Sbjct: 61 DSSEAIDEEVKGPSAKIAKDAEGNWSKAIQGFSRGQG-ATPDDLILK-----GDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HVDGVKSEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ DL ++ + GHRF A I++++ + Y + E VL+D E R+ I Sbjct: 165 EIVAFDLLDVTANRFSRGHRFLANVEIELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENNWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-EHIENVVLGNEKVLFARLEDAEFFWKEDQK----------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK---IAQLIDADVAL 410 LK + L ++A+ V FHAKIG+ E ++R +++ K IA L D + Sbjct: 333 -LKI-----EDLVAKLAK-----VTFHAKIGSITEHMARTKLIAAKLADIAGLTDEEKVD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVAAAIREHYMPTSADGQLPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS FI Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 530 --EDQN---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI-----KHLNE 579 E QN ++ F R++ L ++ R+D++EA + N ++ +++ L+E Sbjct: 502 QFEGQNHAEILEFVKARVQKLLLEKLDRYDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY-AVISDFGTHI 638 F A + + R ++ KK +I+ EI+P + E+ LY AVIS + Sbjct: 562 PFKPA-----IENVSRSINLV----KKAADIA-EINPALFEEDTEQALYDAVIS-----L 606 Query: 639 QESMDHKRYHQ-IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 Q +K + ++H + IE FFD V+V +D VRDNR++LL + Sbjct: 607 QNQWTYKPCEEKFRAIVHMLAPAIEAFFDNVMVMAEDLAVRDNRIALLSEV 657 >gi|264680350|ref|YP_003280260.1| glycyl-tRNA synthetase subunit beta [Comamonas testosteroni CNB-2] gi|262210866|gb|ACY34964.1| glycyl-tRNA synthetase, beta subunit [Comamonas testosteroni CNB-2] Length = 704 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 213/727 (29%), Positives = 363/727 (49%), Gaps = 89/727 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + ++ LK +G++ + + Y +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAAVIFEQLKAQGLLASSESRLTAYASPRRLAAHITEV 64 Query: 60 SPHSPEK-IEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 P + +K + ++L P + L + G T + + + +A L++ Sbjct: 65 LPQAEDKAVSQKLMP--------VSVALDAEGKPTAALLKKLAALGADESAVAALKRQGE 116 Query: 119 ---------------LIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPISAFSWIR 157 L+ D ++ + A+ K+P PK MR W++ H ++R Sbjct: 117 GKAEALFYESTAKGVLLTDGVQKALDEALAKLPIPKVMRYQLQDGWTSVH-------FVR 169 Query: 158 PLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEA 215 P ++ + + +I + + G T+GHRF A P+ +Q+ D Y L EE Sbjct: 170 PAHGLVVM----HGTQVLIGVKALGLTAGAATHGHRFEAAVDPVVIQNADSYAEQLREEG 225 Query: 216 MVLLDPECRRNAILNDAHRLASAVGLEL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLC 273 V+ RR I A +G ++ ++D LL+E+ LVE V + F+K++L Sbjct: 226 AVIASFTERRADIARQLQAAAERIGGDVRPIDDPALLDEVTALVERPNVLVCEFEKEFLA 285 Query: 274 LPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDA 333 +P+E + LT+K NQK F G L + F++VSNIQ D +A+V GN RVV RL DA Sbjct: 286 VPQECLILTMKANQKYFPLLDANGKLTHQFLIVSNIQPQDA-SAVVGGNERVVRPRLADA 344 Query: 334 LHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI 393 F F+ D K L R+ +LD VV+H K+GTQGER++R+ Sbjct: 345 KFF--------------------FDQDRKKTLASRVEQLD--KVVYHNKLGTQGERIARV 382 Query: 394 RVLGKKIAQ-LIDADVA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R + K IAQ L ++++ L D+A +L+K DL T++V EFPELQG +G+ YA +++ Sbjct: 383 RAIAKSIAQQLGNSELGRLADQAAMLAKTDLVTDMVGEFPELQGIMGRYYAQNDGLDVAV 442 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 DAIE+H KPR + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG Sbjct: 443 ADAIEDHYKPRFAGDELPRGDVGVIVALADKLETLVGMFGIGNLPTGDRDPFALRRHALG 502 Query: 512 IIRIILENKIDI--------PLSQF---IEDQN--LILFFHDRLKLYLHDRDIRHDLIEA 558 +IR+++E +++ L F I+D L+ F +DRL ++ +EA Sbjct: 503 VIRMLVEKDLELDLETLLVSTLPAFGDKIQDATPQLVEFIYDRLANMFREQGYSAQEVEA 562 Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY 618 +L + L + ++ + F + + + KR+ IL +K ++ ++ Sbjct: 563 VLALQPQRLSDVQKRLEAVRAFATLPEAPALAAANKRVGNIL---KKAETDVQPQVKEAL 619 Query: 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 L+ +AEK LYAV+ Q+ Y L ++ ++ FF+QV+VN +D ++ Sbjct: 620 LVEQAEKELYAVLQQVAPKAQQQFAAGDYTASLQTLAALRASVDAFFEQVMVNAEDPVLK 679 Query: 679 DNRLSLL 685 NRL LL Sbjct: 680 ANRLGLL 686 >gi|325133391|gb|EGC56055.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M13399] Length = 687 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 217/664 (32%), Positives = 342/664 (51%), Gaps = 68/664 (10%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLL 219 L +L D I+++ + + GN T GHRF + I +++ D Y + E ++ Sbjct: 163 HG-LVVLHGGD----IVNVSVLGLQSGNQTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 220 DPECRRNAIL-----NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 R A + A RL +AV D+ LL+E+ LVEW V F++ +L + Sbjct: 218 ASFAERKAAIQTALEGQARRLNAAV----AADEALLDEVTALVEWPVVLEAGFEEHFLAV 273 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++ NQK F + G L N F+LVSN+Q +D + I++GN RV+ ARL DA Sbjct: 274 PQECLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADP-SHIIRGNERVLRARLSDAE 332 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+K+DQ L+ R+ +L ++VV+H KIG+Q ER+ R++ Sbjct: 333 FFYKQDQK--------------------ATLESRLPKL--VNVVYHNKIGSQAERIERLQ 370 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 + IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A Sbjct: 371 SIAAHIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEA 430 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 +E+H +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R Sbjct: 431 VEQHYQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILR 490 Query: 515 IILENKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 ++++ +D+ L Q D F RL + L + D D++ A+L Sbjct: 491 MLMQYGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVVAVLA 549 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 + L + ++ + F + + KR+ +L KK E+ L Sbjct: 550 KQPRRLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVDESLLQQ 605 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + EK L+A I ++ + L S+ ++ FFD V+V +D V+ NR Sbjct: 606 DEEKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNR 665 Query: 682 LSLL 685 L+LL Sbjct: 666 LNLL 669 >gi|301169648|emb|CBW29249.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae 10810] Length = 688 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 214/719 (29%), Positives = 350/719 (48%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEMEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLEVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIEVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTVCVE----QAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADI 684 >gi|229916324|ref|YP_002884970.1| glycyl-tRNA synthetase, subunit beta [Exiguobacterium sp. AT1b] gi|229467753|gb|ACQ69525.1| glycyl-tRNA synthetase, beta subunit [Exiguobacterium sp. AT1b] Length = 684 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 214/717 (29%), Positives = 348/717 (48%), Gaps = 75/717 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ ++ + L+ + LKE V + ++ Y TP RL + ++ ++ + E GP Sbjct: 14 PAQYVLRSEKQLAERVDAFLKEARVDFGSIEVYSTPRRLAVIVRDVAETQQDLTETLRGP 73 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF R GL T+ D ++ KG Y+ R K L Sbjct: 74 AKKIAQDAEGNWSKAAQGFARGRGL-TVEDLYFAEE--KGVEYVFAERHEKGKETVSLLN 130 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I+ + +PK+M+W T S+ ++RP++ ++ + + IID ++ + Sbjct: 131 GLEDVIRSLTFPKNMKWGT-----SSLRYMRPIRWLIALF-----GQDIIDFTIEGVNTN 180 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 N+T GHRF + + + S Y++ LE A V+ + E R+ I LA+ G + D Sbjct: 181 NVTRGHRFLSKGDVVISSPAEYVQTLESAFVMANYEMRKAEIERQIQELATKQGWTIPLD 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLLEE+ LVEW G FD+ YL LPEE++ T+K +Q+ F +G L N F+ V Sbjct: 241 ADLLEEVTNLVEWPTALFGEFDEAYLDLPEEVLITTMKEHQRYFPVYL-DGTLKNYFVTV 299 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + + +GN +V+ ARL DA+ F++ D+ +D Sbjct: 300 RNGNA-EHLENVARGNEKVIRARLADAVFFYEEDKKT--------------------KID 338 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEI 426 ++ RLD +VFH K+GT G + R+ + K++A L +AD+ V RA + K DL +++ Sbjct: 339 DQLGRLDR--IVFHEKLGTTGAKARRVTKIAKELAALFEADLEKVSRAGAIHKFDLVSQM 396 Query: 427 VREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 V EF ELQG +G++YA+ Q E+ AI EH PR + P ++LADKLD++ Sbjct: 397 VYEFTELQGIMGEKYALQQGEDKEVAAAIREHYMPRFAGDASPETATGAVLALADKLDSI 456 Query: 487 INFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----LSQFIEDQ---------- 532 F+ I PSGS+DP+ALRR G+++I+ + KID+ LS+ +E Q Sbjct: 457 AAFFGIGMIPSGSQDPFALRRQAQGVVQILGDWKIDLSIDTLLSKVVELQLEAGLYEADK 516 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF--FSSAK 585 L FF RLK L ++ +R+D+I+A+L LT+V L + F S Sbjct: 517 EQVKAQLDDFFKLRLKYRLQEQQVRYDVIDAVLTTS----LTVVRLDARADAIQEFVSTD 572 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 + + R+ I KK + ++ P + E L+ I ++++ Sbjct: 573 AKALIEQLSRVVNI----SKKGE--AGDVDPSLFENDHEIALHDAIEQTAPATADAVEMG 626 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + DLL + PI ++F+ +V DD VR NRL + + I V + +V Sbjct: 627 DYKKALDLLQQLESPIMMYFEHTMVMSDDEAVRQNRLHEMNRLATTIKRVADFNALV 683 >gi|257869134|ref|ZP_05648787.1| glycyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803298|gb|EEV32120.1| glycyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 696 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 228/745 (30%), Positives = 360/745 (48%), Gaps = 105/745 (14%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI EE+PA + + + L L + + ++ Y TP RL +Y+ G+ Sbjct: 10 NLLLEIGLEEMPAHVVTPSMKQLQQKTAEFLTAHALQFSSIEAYSTPRRLAVYVTGIPES 69 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + EE GP G KA GF+R GL T + I G Y+ V + Sbjct: 70 QADTQEEVKGPAKKIAIDADGNWSKAAQGFVRGQGLTTDA---ITFKELNGVEYVYVTKH 126 Query: 115 ---KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 KP + LK + I + +P +M W+ F +IRP+ I+ + AE Sbjct: 127 IQGKPALEVLTGLKEV----ITSLVFPVTMHWANFD-----FEYIRPIHWIVALFGAE-- 175 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ + ++ + GHRF + ++ D Y+ +E V+ DP R+ I++ Sbjct: 176 ---VVPFTVLDVVTDRKSRGHRFLGEE-VTFETADDYLSQMERQFVIADPSKRQQLIVDQ 231 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A + D+DLLEE+ LVE+ F+G FD+KYL +PEE++ ++K +Q+ F Sbjct: 232 IDAIAKENNWRIDLDEDLLEEVNNLVEYPTAFVGDFDEKYLSVPEEVLVTSMKEHQRYFD 291 Query: 292 TRTREGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 RT EGVL FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 292 VRTPEGVLLPHFISARNGDLVKIDN----VVKGNQKVLTARLEDAEFF------------ 335 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 +N D +DQ + +L V FH KIG+ E++ R+ V IAQ+I V Sbjct: 336 --------YNEDKKLTIDQCVEKLKQ--VTFHEKIGSLYEKMQRVAV----IAQIIGETV 381 Query: 409 ALVD-------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 L + RA + K DL T +V EFPELQG +G++YA+LQ E AI EH P Sbjct: 382 ELSEDERTELKRASEIYKFDLVTNMVGEFPELQGVMGEKYALLQGETPQVAQAIREHYMP 441 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 +P + + +++ADKLD+L++F+A+ PSGS DPYALRR T GIIRII E + Sbjct: 442 VSAEGALPESSVGAILAIADKLDSLLSFFAVGMIPSGSNDPYALRRQTYGIIRIIAEKRW 501 Query: 522 DIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 PL++ E + +I F RL+ +L ++IRHD+IEA++ Sbjct: 502 YFPLARLQEKIRTAINEQPSVYGIQLNEGQEQVIDFVDGRLRQFLATKNIRHDVIEAVIN 561 Query: 562 PENDNLLTIVD----LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ 617 ++ + + L HLN+ F S + + +++ + +K + E +I+P+ Sbjct: 562 SRQGDISLLFEAAQMLRAHLND-------SDFKPSMEALTRVINLAKKADLE-HKQINPE 613 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 E+E LY + I++ + Q L S+ IE +FDQ +V VDD + Sbjct: 614 LFENESENTLYEAV----VAIEDKFPQQTMEQNYQSLVSLRPLIEAYFDQTMVMVDDEAI 669 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R NR +LL I + L V ++ +V Sbjct: 670 RRNRFALLDKIAKMSLAVASLDALV 694 >gi|327490528|gb|EGF22309.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1058] Length = 679 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 217/718 (30%), Positives = 362/718 (50%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + + + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQMRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DER 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLGKE-TEIASADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR+I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYDNQAAVLDFFRARVE-KMMDRNIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + + ++P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLAAAIEK 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD ++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLAANL-------------DQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|294651684|ref|ZP_06728986.1| glycyl-tRNA synthetase subunit beta [Acinetobacter haemolyticus ATCC 19194] gi|292822403|gb|EFF81304.1| glycyl-tRNA synthetase subunit beta [Acinetobacter haemolyticus ATCC 19194] Length = 689 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 209/720 (29%), Positives = 362/720 (50%), Gaps = 68/720 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L LK+ G+ + + Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALKAETEKGLKDAGLNFAAIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K + L+ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEK-----VCFLKD 121 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + ++ +L I+ A+ +P K MR + + + ++RP+K ++ + + Sbjct: 122 VKGQSLDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----KDNQ 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I + + Sbjct: 172 VVEATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQDQVKK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F Sbjct: 232 LADEVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLIN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI +SNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 292 AEGKLQPYFITISNIESKDP-IQIIEGNEKVVRPRLSDAEFFFLQDQK------------ 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L ++VF A++GT + RI L ++ + A+ A ++A Sbjct: 339 --------QPLASRKEKL--ANMVFQAQLGTLWNKSERIAKLAVALSPITGANAADAEKA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL +E+V EFPELQG G YA L+ E+ +A+ E P+ + +P K Sbjct: 389 ALLAKCDLTSELVGEFPELQGIAGTYYARLEGESHEVAEALGEQYLPKFAGDVLPQTKTG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 449 TTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNFALQ 508 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F R + D+ + D+I+A+ + L + +N Sbjct: 509 GYGDVVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVIQAVQALAPKSPLDFDKRVTAVN 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA E + +E + L+ AEK LYA +S + Sbjct: 569 HFRTLPEAAALAAANKRVANILAKEATPEGAV-VEAN---LVEAAEKALYAELSALTPVV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + + Y + L ++ PI+ FF+ V+V DD E++ NRL LL ++++ + +V Sbjct: 625 QPLLAARNYTEALSKLAALRAPIDAFFEGVMVMADDAELKANRLRLLAQLRDLFTAIADV 684 >gi|319775140|ref|YP_004137628.1| glycine tRNA synthetase subunit beta [Haemophilus influenzae F3047] gi|329122944|ref|ZP_08251515.1| glycyl-tRNA synthetase beta subunit [Haemophilus aegyptius ATCC 11116] gi|317449731|emb|CBY85938.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae F3047] gi|327471875|gb|EGF17315.1| glycyl-tRNA synthetase beta subunit [Haemophilus aegyptius ATCC 11116] Length = 688 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 214/719 (29%), Positives = 350/719 (48%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++ +L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIEVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTVCVE----QAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADI 684 >gi|325139583|gb|EGC62123.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis CU385] gi|325200981|gb|ADY96436.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis H44/76] Length = 686 Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 216/662 (32%), Positives = 344/662 (51%), Gaps = 64/662 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 49 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 107 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 108 VHDGKQ-DVYAYEYVQIGKPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 161 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 L +L D I+++ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 162 HG-LVVLHGGD----IVNVSVLGLQSGNKTLGHRFLSDGEITIENADSYAAQMREQGKVV 216 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 217 ASFAERKAAIQTVLEGQARRLNATAAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 276 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 277 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 335 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 336 QDQ--------------------KATLESRLPKLT--NVVYHNKIGSQAERIERLQSIAA 373 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 374 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEITEAVEQH 433 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 434 YQPRFAGDNLPEGKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 493 Query: 519 NKIDIPLSQFIED------QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPE 563 +D+ ++ I+ Q L+ F RL + L + D D++ A+L + Sbjct: 494 YGLDV--NELIQTAFNSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQ 550 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + + KR+ +L +K + E+ ++ L + Sbjct: 551 PRRLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDE 606 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+ Sbjct: 607 EKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLN 666 Query: 684 LL 685 LL Sbjct: 667 LL 668 >gi|325125921|gb|ADY85251.1| Glycyl-tRNA synthetase beta chain [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 688 Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 219/731 (29%), Positives = 359/731 (49%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 4 DFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ S I + KG Y V ++ Sbjct: 64 QADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGM---SADDIYFEELKGVEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +++L + V I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 121 KAGKEAKEILLGLDEV-IKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLGDSVV-LANADDYVEALRDQYVIVDADERKDMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVNSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINCFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 P+ + R+D V FH KIG+ E+++R+R++G +A+ L +VA Sbjct: 336 --------YPISHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYACLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q + Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL +K + + P +E+ LY Sbjct: 566 AAAKVLQQHHDDEAFKPVVESLTRIANIL---KKAKFSQASPVDPSLFEDRSEQDLY--- 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D + DH ++ L + I+ +FD ++ D V++NRLS L + ++ Sbjct: 620 -DGVEALANVKDHAELYEAFVALQGV---IDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|15677760|ref|NP_274924.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis MC58] gi|25009341|sp|Q9JXQ5|SYGB_NEIMB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|7227187|gb|AAF42259.1| glycyl-tRNA synthetase, beta chain [Neisseria meningitidis MC58] gi|316985552|gb|EFV64499.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis H44/76] Length = 687 Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 216/662 (32%), Positives = 344/662 (51%), Gaps = 64/662 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQIGKPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 L +L D I+++ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HG-LVVLHGGD----IVNVSVLGLQSGNKTLGHRFLSDGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTVLEGQARRLNATAAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKLT--NVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEITEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPEGKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDIPLSQFIED------QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPE 563 +D+ ++ I+ Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDV--NELIQTAFNSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQ 551 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + + KR+ +L +K + E+ ++ L + Sbjct: 552 PRRLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDE 607 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+ Sbjct: 608 EKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLN 667 Query: 684 LL 685 LL Sbjct: 668 LL 669 >gi|291484971|dbj|BAI86046.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. natto BEST195] Length = 679 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 213/719 (29%), Positives = 360/719 (50%), Gaps = 65/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++KG++ Sbjct: 5 DLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKGVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF + G + D IK+ KG Y+ V Sbjct: 65 QDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQG-ANVEDLYIKE--VKGIEYVFV--- 118 Query: 116 PKRLIEDVLKTIVP---VAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K K+++P I + +PK+MRW +IRP+K I+ + Sbjct: 119 QKFQAGQETKSLLPELSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + +I + + G T GHRF H + ++S Y L+E V+ DP R+ I + Sbjct: 169 QDVIPFSITNVESGRTTQGHRFLG-HEVSIESPSAYEEQLKEQHVIADPSVRKQMIQSQL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 228 EAMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 288 KDKNGDLLPHFITVRNGN-SHAIENVARGNEKVLRARLSDASFFYKEDQ----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 K N+D + + +L+ ++VFH ++G+ ++V R+ + +K+A + AD + Sbjct: 336 ---KLNIDAN------VKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDTLK 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR P Sbjct: 385 HVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGETP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V++ADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I + + Sbjct: 445 STFTGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEELL 504 Query: 530 ------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + + Sbjct: 505 TFVQTDKEIELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLGA 564 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 F +A+ + ++++I +K R +I P E E +L+ ++QE+ Sbjct: 565 P---GFKETAEALGRVISISKKGVRG---DIQPDLFENEYEAKLFDAYQTAKQNLQENFS 618 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 619 KKDYEAALASLAALKEPIDAYFDHTMVIADNESLKANRLAQMVSLADEIKSFANMNALI 677 >gi|293568651|ref|ZP_06679966.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1071] gi|293571625|ref|ZP_06682646.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E980] gi|291588611|gb|EFF20444.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1071] gi|291608295|gb|EFF37596.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E980] Length = 691 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 217/734 (29%), Positives = 358/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKESKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + + Y L E V+ P+ R+ I+ A+ Sbjct: 170 VIPFEILDVKTGRASRGHRFLG-EDVTIAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPHFISARNGDRVKLEN----VVRGNQKVLTARLEDAEFF--------------- 329 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + ++ Sbjct: 330 -----YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 383 MDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKTAVATAIREHYMPISSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 443 PQSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 502 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 503 QETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLT 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E+ P+ +AEK L+ Sbjct: 563 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAQLEKQSEVDPELFENDAEKELH 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 620 KAVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQI 675 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 676 AAMALSLASLDQII 689 >gi|312882229|ref|ZP_07741975.1| glycyl-tRNA synthetase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] gi|309370073|gb|EFP97579.1| glycyl-tRNA synthetase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] Length = 686 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 216/720 (30%), Positives = 347/720 (48%), Gaps = 66/720 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LKE + +Q ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFASNFTTELKEAELDHQGIKWFAAPRRLALKVTELAES 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 64 QADKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGIAVEQAERMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P K MRW + +IRP+K++ +L +E + Sbjct: 122 KGQSTTAIVVELAAKALAKLPIAKPMRWGDKTT-----QFIRPVKTLTILLGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++S + Y LE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVQSSRTLRGHRFMGEQEFTIESAEQYPEILETRGKVMADYEARKALILADAQK 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ASA+G L +ED +L+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AASAIGGLADLED-ELVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 T + L FI VSNI++ D +++GN +VV RL DA F Sbjct: 291 TEDKKLLPNFIFVSNIESKDP-RQVIEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ LD +F ++GT ++ RI L IA I ADV +R Sbjct: 333 ---FNTDRKRPLIDRLPELD--SAIFQKQLGTIKDKTDRITELAGYIANKIGADVEKSER 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P++ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDTLPSDGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V+LADKLDT++ + I + P GS DP+ALRRA+LG++RII+E D+ L I Sbjct: 448 STAVALADKLDTIVGIFGIGQAPKGS-DPFALRRASLGLLRIIVEYGYDLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + +I F R + + D+ D+I+A+L +K ++ Sbjct: 507 SLFGSRLTNESVEHEVIDFMLGRFRAWYQDQGFSIDVIQAVLARRPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K ++ + L E E+ LY ++ I Sbjct: 567 HFRTLDAAEPLAAANKRVSNILA---KFEGDLPERVDETLLTEEPEQALYQALATPAVSI 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + + Y Q L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 E--LKNGGYQQQLTQLAELREPVDKFFDNVMVMADDEALKKNRLTLLNQLRNLFLQIADI 681 >gi|148359386|ref|YP_001250593.1| glycyl tRNA synthetase subunit beta [Legionella pneumophila str. Corby] gi|148281159|gb|ABQ55247.1| glycyl tRNA synthetase, beta subunit [Legionella pneumophila str. Corby] Length = 688 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 198/702 (28%), Positives = 349/702 (49%), Gaps = 60/702 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSAGNPTPALLGFAKSCGVTV--DALTKTQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 LG-----VTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI AS +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNI-ASSNPKQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + + V+F K+G+ ++V RI+V+ ++Q ++ L +RA Sbjct: 338 -------QPLSAHIPSTE--QVIFQVKLGSVYDKVQRIKVMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAVVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 +SLAD++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I Sbjct: 449 ALSLADRMDTLVGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 530 ------EDQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +D+NL+ F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 Y + LL S+ EP++ FFD V+V V++ ++ NR Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNR 668 >gi|314939537|ref|ZP_07846765.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a04] gi|314942708|ref|ZP_07849534.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133C] gi|314953301|ref|ZP_07856229.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133A] gi|314993381|ref|ZP_07858746.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133B] gi|314995731|ref|ZP_07860820.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a01] gi|313590003|gb|EFR68848.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a01] gi|313592046|gb|EFR70891.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133B] gi|313594644|gb|EFR73489.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133A] gi|313598573|gb|EFR77418.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133C] gi|313641173|gb|EFS05753.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a04] Length = 691 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 222/735 (30%), Positives = 356/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II ++ +I + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 IIPFEILDIKTDRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRKEMIITQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPHFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 329 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 330 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVRLSEEE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 382 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGD 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 442 LPETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSV 501 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 502 LQETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDL 561 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ EAEK L Sbjct: 562 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKEL 618 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L Sbjct: 619 YKAVEGMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLNQ 674 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 675 IAAMALSLASLDQII 689 >gi|54297752|ref|YP_124121.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Paris] gi|53751537|emb|CAH12955.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Paris] Length = 688 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 198/702 (28%), Positives = 347/702 (49%), Gaps = 60/702 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCGVTV--DALTKTQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 LG-----VTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI AS +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNI-ASSNPKQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 338 -------QPLSAHIPSTEQ--VIFQVKLGSMYDKVQRIKAMMDHLSQSLNLSSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEETVVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 +SLAD++DTL +AI +KP+G KDP+ LRR L ++R+++ + LS I Sbjct: 449 ALSLADRIDTLAGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 530 ------EDQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +D+NL+ F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 Y + LL S+ EP++ FFD V+V V+D ++ NR Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEDESLKQNR 668 >gi|304388483|ref|ZP_07370586.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis ATCC 13091] gi|304337480|gb|EFM03646.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis ATCC 13091] Length = 687 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 213/660 (32%), Positives = 342/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + N T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q +D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + A A +RA L+KADL TE+V EFPELQG +GK YA L E A+E+H Sbjct: 375 HIAKALGAGAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAKAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPEGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L I ++ + EF + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDIAAKLQAVAEFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V DD V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMADDAAVKQNRLNLL 669 >gi|119773167|ref|YP_925907.1| glycyl-tRNA synthetase subunit beta [Shewanella amazonensis SB2B] gi|166227923|sp|A1S1I1|SYGB_SHEAM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119765667|gb|ABL98237.1| Glycine--tRNA ligase [Shewanella amazonensis SB2B] Length = 689 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 221/721 (30%), Positives = 350/721 (48%), Gaps = 63/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + AE L + + ++++ Y P RL LY+KGL+ Sbjct: 5 NLLIEIGTEELPPKALRTLAESFQANFSEELTKAELPFESIEWYAAPRRLALYVKGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA-VLR 114 +K+ E+ GP V G KA +G+ R G+ ++ D + VY A V Sbjct: 65 QEDKVVEKRGPAVQSAFDADGNPTKAAEGWARGNGITVAEAERLATDKGEWLVYRANVAG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P ++ + + A+ K+P PK MRW + + +IRP+ ++ +L +E Sbjct: 125 EPTSVL---VPAMTQRALDKLPIPKPMRWGSNST-----QFIRPVHTVTLLLGSE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I ++ I GHRF + D+Y+ L+E V+ D + R+ I DA Sbjct: 172 LIAGEVLGIQSDRTIRGHRFMGESSFSLDHADNYLAALKERGKVIADYQARKALIKADAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A+ +G ++ LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 KAAAVIGGNADIEESLLEEVASLVEWPVVLTAHFEEKFLAVPAEALVYTMKGDQKYFPVF 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + +G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 292 SNDGKLLPNFIFVANIESKDP-AQIIAGNEKVVRPRLADAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D L R+A L+ VVF ++GT +R RI L IA I A R Sbjct: 334 ---FNTDKKHTLASRLASLET--VVFQKQLGTLKDRAERISALAGFIAGQIGASSEDAAR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA L E + A+EE KP+ ++VP+ + Sbjct: 389 AGLLSKCDLMTNMVMEFTDTQGTMGMHYARLDGEAEAVAVALEEQYKPKFSGDSVPSAGV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP--------- 524 S V+LA+KLDTL + I + P G+ DP+ALRRA +G++RII+ENK+ + Sbjct: 449 SCAVALAEKLDTLSGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAV 508 Query: 525 ------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 LS + ++ F R + + D+ I D+I A+L D I ++ Sbjct: 509 ELHGSNLSNALAADEVLEFLMGRFRAWYQDKGISTDVILAVLARRPTRPADFDDRILAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA K E+ I+ L AEK L A +++ I Sbjct: 569 HFRTLEQAAALAAANKRVSNILA---KVEGELPSSINDALLSEAAEKALAAKLAEVTPVI 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y Q L ++ E ++ FF+ V+V DD+ +R+NRL+LL +++ L V ++ Sbjct: 626 APLFAAGNYQQALTELAALRESVDQFFEDVMVMADDQALRNNRLALLGNLRDQFLHVADI 685 Query: 699 Q 699 Sbjct: 686 S 686 >gi|331006049|ref|ZP_08329387.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC1989] gi|330420135|gb|EGG94463.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC1989] Length = 691 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 215/716 (30%), Positives = 350/716 (48%), Gaps = 66/716 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + K + + + L EG+ + + Y TP RL + + GL+ Sbjct: 4 DFLVELGTEELPPKALLKLSTAFTAGIKAGLSAEGLSFSEISPYATPRRLAVVVSGLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +P E GP V G KA + F + G+ I+D D K + V R Sbjct: 64 TPVNDVEIWGPPVKVAFDAEGNPSKAAEAFAKKNGI-AITDLVTANDGKMDKL---VFRT 119 Query: 116 PKRLIE--DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ +L+ IV ++ K+P K MRW + + ++RP+ L +L D Sbjct: 120 QAGGVQTTSLLEGIVNNSLAKLPIAKRMRWGASRT-----EFVRPVH-WLVMLFGND--- 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 I+D + + +T GHRFH + + + Y L + A V+ D R+ I Sbjct: 171 -IVDATVLGLSANRLTRGHRFHYNQTLDIANASEYASKLNDIAYVVADFAQRKQLIEQQV 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A VG V LL+E+ GLVEW G F++++L +P E + ++K +QK F Sbjct: 230 IAEAKKVGGTAVIGSGLLDEVAGLVEWPVALTGRFEERFLSVPAEALISSMKEHQKYFHV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI VSNI+++D A ++ GN RV+ RL DA F+ D+ L+S +E Sbjct: 290 VDEKGELLPYFITVSNIESTDP-AQVIDGNERVIRPRLSDAAFFFDTDKKT--TLASKRE 346 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 K VVF AK+GT E+ RI L + IA+ + +V Sbjct: 347 QLKK--------------------VVFQAKLGTVYEKTQRIANLSRAIAEKLSVNVDTAV 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L K DL +E+V EF ++QG G YAV E A+ EH PR + +P+N Sbjct: 387 RAGELCKCDLVSEMVYEFADMQGIAGYHYAVHDGEASDVALAMNEHYMPRFAGDVLPSND 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-----Q 527 +S V+LAD+LDTL+ + I E+P+GSKDP+ALRRA++ ++R+++E + +I L Sbjct: 447 VSAVVALADRLDTLVGIFGIGEQPTGSKDPFALRRASVAVLRLLVEQQRNIDLRDLLTLA 506 Query: 528 FIEDQNL----------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 F + NL + + DR + + ++ I + +A+ + L I ++ + Sbjct: 507 FQQHNNLAEGQAVIEQVLSYMLDRFRAWYEEQSIPATVFQAVSAKQLSQPLDIDQRVQAV 566 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 N F + E + KR+ ILA K + ++ L +AEK LYA + + Sbjct: 567 NFFRQLPEAEALAAANKRVANILA----KADSVPDSVNVDSLQEDAEKALYAAVVEQQKV 622 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ ++Y + L S+ E ++ FFDQV+V DD +++NRL+LLQ ++ + Sbjct: 623 VEPLFAQRQYKEALTALASLREVVDTFFDQVMVMADDEALKNNRLALLQQLRGLFF 678 >gi|227544908|ref|ZP_03974957.1| glycine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300910065|ref|ZP_07127525.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri SD2112] gi|227185120|gb|EEI65191.1| glycine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300892713|gb|EFK86073.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri SD2112] Length = 691 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 211/732 (28%), Positives = 372/732 (50%), Gaps = 80/732 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + LKE+ + + +++++ TP R+ L + GLS Sbjct: 5 YLLEVGVEEMPAHVVTPSIKQLHERVEKYLKEQRITFDDIQEFATPRRMALLIHGLSDKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G ++ D + K+ KG Y+ V + Sbjct: 65 PDIDESVKGPAKKIAQDADGNWTKAAIGFTRGQG-ASVEDIEFKE--VKGVEYVFVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +VL+ + P I + +P M+W + +IRP++ ++ +L +++ Sbjct: 122 AGKTVAEVLQGL-PTVITSMNFPTLMKWGYNN-----LQFIRPIRWLVSLL-----NDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ ++ G T GHRF HP+++ D Y L V+ D R+N I + ++ Sbjct: 171 VPFNILDVEAGRETQGHRFLG-HPVEIAKADDYEETLNNDFVIADQTKRKNLIKDQITKI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + ++ D+DLLEE+ LVEW F GSFD+KYL LP+ ++ ++K NQ+ F R + Sbjct: 230 INENNWQVDWDEDLLEEVNNLVEWPTAFAGSFDEKYLALPDPVLITSMKDNQRFFCVRDK 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L + FI V N +D +++GN RV+ RLEDA F++ DQ Sbjct: 290 DGNLLSHFISVRN-GNTDYLDNVIKGNERVLVPRLEDAQFFYQEDQ-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADVALV 411 +D+ + RL V FH KI + +++ R+ VLGK++ L D ++A + Sbjct: 335 ------KLTIDEYVERLKK--VSFHDKISSMYDKMQRVAVIANVLGKQL-NLSDEELADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 386 DRAAHIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKDDVATAIREHYMPISAEGELPQT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + ++PL Sbjct: 446 KIGAVLAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADRGWNLPLLSIQSE 505 Query: 526 -----------SQFIEDQN---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 F ++N + FF DR+K H + +RHD+I+A +++ I+ Sbjct: 506 IAPAFENAEINVSFDLNKNSDEVRSFFLDRIKQLFHGQKVRHDIIDAATDTRQNDIANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS-LEISPQYLLLEAEKRLYAV 630 + I+ +++ + F + + ++L I +K R +S L + P +E +++ Sbjct: 566 EAIQTIDD---HKDDDNFKEDIEALTRVLRIAKKDKRPVSELVVDPNLFENPSEAKMHTA 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +S+ Q+++ L ++ I +FD+ ++ + ++R+NRL+ L + N Sbjct: 623 VSELIKENQQTVSENFA-----ALRTLTPIISEYFDENMIMDKNEDIRNNRLAQLSILAN 677 Query: 691 IILIVINVQKIV 702 ++ N+ ++ Sbjct: 678 QASLIGNLDNLI 689 >gi|294138812|ref|YP_003554790.1| glycyl-tRNA synthetase subunit beta [Shewanella violacea DSS12] gi|293325281|dbj|BAJ00012.1| glycyl-tRNA synthetase, beta subunit [Shewanella violacea DSS12] Length = 689 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 218/714 (30%), Positives = 345/714 (48%), Gaps = 61/714 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE LK+ + +++ + P RL L + L+ Sbjct: 5 NLLIEIGTEELPPKSLRKLAESFLSNFTDELKKAELSFESAVWHAAPRRLALSVNQLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEEAGRLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + + +IRP+ ++ + +E I Sbjct: 123 VGVETKSLISAMAQRALDKLPIPKPMRWGSNKT-----QFIRPVHTVTMLFGSE-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + +L I + GHRF ++ D+Y+ L+E VL D E R+ I DA Sbjct: 173 VAGELLGIKSDRVIRGHRFMGQASFELDHADNYLSALKEKGKVLADYEVRKTIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + +LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGIADLEDELLEEVCSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI + D I+ GN +VV RL DA F++ D+ Sbjct: 293 KTGQLLPNFIFVTNIVSKDP-QVIISGNEKVVRPRLADAEFFFENDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+ L+ VVF ++GT +RV RI + IA IDA+ RA Sbjct: 340 --------QTLEDRLVSLET--VVFQKQLGTIKQRVERISEMAGFIASSIDANAEDASRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A++E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVALALQEQYKPKFSGDTVPTASIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RI +EN + + L +Q Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRICVENNLPLDLVNLIAKAQE 509 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + FF R + + D+ + D+I A+L IK + Sbjct: 510 LHGSNLSNETTAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFDSRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K +I I L AEK L +++ + Sbjct: 570 FRTLDQASALAAANKRVSNILA---KIEGDIPASIDASLLTENAEKALAEKLNELQPKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 Y + LL + E ++ FF+ V+V DD +++NRL+LL ++ L Sbjct: 627 PLFAAANYQEALALLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFL 680 >gi|114567035|ref|YP_754189.1| glycine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317967|sp|Q0AWT6|SYGB_SYNWW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114337970|gb|ABI68818.1| Glycine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 688 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 235/733 (32%), Positives = 370/733 (50%), Gaps = 81/733 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+P+ + +DL + L E + + TP RL L++K +S Sbjct: 4 DLLLEIGVEEMPSAYMPRVLKDLKDLAQKNLAEARLSCGEVLTLGTPRRLCLWVKEISEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E GP+ G KA GF RS G+ + QI++ G YL ++K Sbjct: 64 QEDSLLENRGPKKSIAFDANGNPSKAGLGFARSQGVD-FRELQIRE--VSGVEYLFAIKK 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + E +L ++ I + +PKSM WS + + RP++ +L I +K Sbjct: 121 EKGQAAEQILPGLLLKVIHSLSFPKSMTWSYYQTRFA-----RPIRWLLAIF-----GDK 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ +++ I N TYGHRF + + V S+D Y R L E V+LD R+ I + Sbjct: 171 NVEFNIENIKSANYTYGHRFLSTGVLLVTSIDDYFRVLREHYVILDQAERKKMIWQQVQK 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A G + +E+++LLEE+ LVE+ F G F YL +P E++ ++ +Q+ F Sbjct: 231 VAGEAGGKAMENEELLEEVAFLVEFPTAFYGEFSPSYLDVPPEVLTTSMIEHQRYFPVYN 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L F+ V N +D IV+ GN RV+ ARLEDAL FW Sbjct: 291 NEGRLLPGFVGVRN--GTDYCLDIVRAGNERVLKARLEDALFFW---------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL--- 410 N D K L++ A+L +V+FH ++GT ++V R+ +K+A I L Sbjct: 333 ----NEDSRKSLEEMSAKLK--NVLFHERLGTLADKVLRL----QKLALFIGQQTGLGQP 382 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R+ +L KADL + +V EFPELQG +G+ YA E +AI EH PR + + Sbjct: 383 EKLQRSALLCKADLMSNMVYEFPELQGIMGRYYASGSAEEPEVAEAIFEHYLPRFAGDKL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI------- 521 P++ I +SLA+K+D L+ ++I KPSGS+DPYALRR LG++ IIL+ K+ Sbjct: 443 PSSAGGIVLSLAEKMDNLMGCFSIGIKPSGSQDPYALRRQALGLVNIILDKKLSIDLKLV 502 Query: 522 ---------DIPLSQFIED--QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLT 569 DI L + ED + L+ F + R++ L D I +D+++A L RP D T Sbjct: 503 FEQAYLGYKDIDLEKSREDSVKELLDFIYQRMRGVLLDNGISYDVVDAALSRPSFDLFET 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 K L EF S E F++ R+ + + ++ EI L++ L+ E+EK L Sbjct: 563 YYRAFK-LQEFKKSPVFEDFMVVYNRVHNL--SRKWESEEIDLDL----LVDESEKNLCQ 615 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + I++S+ + Y + +LL ++ I+ FF V+V VDD ++ RL +L+ I Sbjct: 616 KLPGLQEDIKKSLIAQDYTRALELLAALRADIDQFFTAVMVMVDDERLKAARLGILKSIA 675 Query: 690 NIILIVINVQKIV 702 N+ + + KIV Sbjct: 676 NMFNSIADFSKIV 688 >gi|257886869|ref|ZP_05666522.1| glycyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257822923|gb|EEV49855.1| glycyl-tRNA synthetase [Enterococcus faecium 1,141,733] Length = 694 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 218/735 (29%), Positives = 357/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 7 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 67 QADSEEEVKGPAKKIALDVDGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 123 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 124 THGKESKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + + Y L E V+ P+ R+ I+ A+ Sbjct: 173 VIPFEILDVKTGRASRGHRFLG-EDVTIAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 232 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 291 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 292 DQGMLLPHFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 332 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 333 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEE 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P Sbjct: 385 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKTAVATAIREHYMPISSEGE 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 445 LPQSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSV 504 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 505 LQETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDL 564 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ +AEK L Sbjct: 565 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAQLEKQSEVDPELFENDAEKEL 621 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L Sbjct: 622 HKAVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQ 677 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 678 IAAMALSLASLDQII 692 >gi|313890643|ref|ZP_07824270.1| glycine--tRNA ligase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313120954|gb|EFR44066.1| glycine--tRNA ligase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 679 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 211/701 (30%), Positives = 355/701 (50%), Gaps = 84/701 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L+ + Y+ ++ + TP RL + + GL+ + +E+ GP Sbjct: 15 PAYVVTASEKQLGQKMATFLEANRLSYERIQTFSTPRRLAVRVHGLTDQQEDLVEDFKGP 74 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLK 125 G KA GF+R GL T D + +K KG+ Y+ V + K + ++VL Sbjct: 75 SKKIALDAQGNFTKAAQGFVRGKGL-TTDDIEFRK--IKGEEYVYVTKNEKGKAAQEVLM 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W++ ++F +IRP+ ++ +L + ++++ +I Sbjct: 132 GI-PDLLASLTFPVSMHWAS-----NSFEYIRPVHTLTVLL-----DDHLLEMPFLDISS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 + GHRF I +Q+ Y DL V++DP R+ ILN L +++ Sbjct: 181 ARYSRGHRFLGKE-IAIQNALSYEADLRTQSVIVDPLERQQMILNQIKELEKEHHIQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFLGTFDTKYLSVPEEVLVTSMKNHQRYFVVRDQSGKLLPNFIS 299 Query: 306 VSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 V N G A +++GN +V+ ARLED FW+ DQ LK Sbjct: 300 VRN-----GNAQYIENVIKGNEKVLIARLEDGEFFWREDQK------------LK----- 337 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLS 418 ++ +A+L+ DV FH KIG+ + + R V+ +A+ L + V+RA + Sbjct: 338 ---IEDLVAKLE--DVTFHEKIGSLAQHMERTGVIANYLAEKANLSAEESKAVERASQIY 392 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF ELQG +G++YA+L E+ S AI EH P +P K+ ++ Sbjct: 393 KFDLLTGMVGEFDELQGVMGEKYALLAGEDPSVATAIREHYLPSSADGTLPETKVGAILA 452 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADKLDTL++F+++ PSGS DPYALRRAT GI+RI DIP+ Q I + Sbjct: 453 LADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRIFEAFGWDIPMDQLIANCYQLSFA 512 Query: 532 -------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + ++ F R++ + I D+ EA+L + + +++ +++ Sbjct: 513 DFSYTHQEEVMTFIAARIEKMM-GSSIPKDIREAVLASTH---YQVPEMLATAQALVAAS 568 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 K + ++ + + ++ + K + E++ I+P + EK LY I D ++ Sbjct: 569 KTSHYKVAVENLSRVFNLAAKVDTEVT--INPNIFENQEEKELYQAIVDL------QLEG 620 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 H++ L ++ + I FFD +V +DRE+R+NRL+LL Sbjct: 621 HAAHKLEQLF-ALTDKIAAFFDHTMVMAEDREIRNNRLALL 660 >gi|116514231|ref|YP_813137.1| glycyl-tRNA synthetase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275037|sp|Q04A23|SYGB_LACDB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116093546|gb|ABJ58699.1| glycyl-tRNA synthetase beta chain [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 688 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 219/731 (29%), Positives = 358/731 (48%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 4 DFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ S I + KG Y V ++ Sbjct: 64 QADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGM---SADDIYFEELKGVEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +++L + V I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 121 KAGKEAKEILLGLDEV-IKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R+ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLGDSVV-LANADDYVEALRDQYVIVDADERKAMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVNSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINCFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 P+ + R+D V FH KIG+ E+++R+R++G +A+ L +VA Sbjct: 336 --------YPISHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYACLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q + Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL +K + + P +E+ LY Sbjct: 566 AAAKVLQQHHDDEAFKPVVESLTRIANIL---KKAKFSQASPVDPSLFEDRSEQDLY--- 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D + DH ++ L + I+ +FD ++ D V++NRLS L + ++ Sbjct: 620 -DGVEALANVKDHAELYEAFVALQGV---IDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|261400609|ref|ZP_05986734.1| glycyl-tRNA synthetase, beta subunit [Neisseria lactamica ATCC 23970] gi|269209693|gb|EEZ76148.1| glycyl-tRNA synthetase, beta subunit [Neisseria lactamica ATCC 23970] Length = 687 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 211/660 (31%), Positives = 339/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGVPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 INDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSGNQTLGHRFLSSGEITIENADSYAEQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|309751409|gb|ADO81393.1| Glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae R2866] Length = 688 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 216/721 (29%), Positives = 350/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLCEKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGRLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F K+GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQKLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA + EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP------AEKALAEAVLALRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGDYTTVLDKLANLRMPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|147677235|ref|YP_001211450.1| glycyl-tRNA synthetase, beta subunit [Pelotomaculum thermopropionicum SI] gi|146273332|dbj|BAF59081.1| glycyl-tRNA synthetase, beta subunit [Pelotomaculum thermopropionicum SI] Length = 698 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 219/731 (29%), Positives = 343/731 (46%), Gaps = 74/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+LLEI EE+PAR A +L I + L E+ + + + + TP RL LY++GL+ H Sbjct: 7 DYLLEIGVEELPARFLDPALAELKEISVRALAEKRLSCKKVETFGTPRRLALYVEGLAEH 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E GP V G +A +GF RS G+ ++K + AV R+ Sbjct: 67 QEPLETEVKGPAVKVAFKPDGTPTRAAEGFARSQGVAV--SGLVRKFVGHVEYVFAVKRE 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL I P I + +PK MRW + RP++ I+ + +++ Sbjct: 125 EGRPAREVLSEIAPALIDGLHFPKPMRWGNLE-----VRFARPIRWIVSLF-----GDEV 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + + G T GHRF + P+ + Y + V++D RR I L Sbjct: 175 VEFEYAGLKAGRTTCGHRFLSKEPVVLAFSSEYFEKMRSNYVIVDTAERRQLIRRQVQEL 234 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ G ED+DLL E+ LVE+ +G F YL LP E++ ++ +Q+ F + Sbjct: 235 AASAGGRAEEDEDLLNEVSNLVEYPTALVGEFSPDYLNLPREVLVTPMREHQRYFPVVSP 294 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N A D I G +V+ ARL DA F Sbjct: 295 DGGLLPKFIAVKN-GAPDHLDIIRSGYEKVLRARLADANFF------------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-----DVAL 410 F DL PL ++ L V+F +GT ++V R+ L +A ++ A +VAL Sbjct: 335 -FQEDLKTPLAGKVPALK--KVIFQESLGTVYDKVERLGALAGYLAGVMGAGRQEKEVAL 391 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL T +V EFPELQG +G+EYA+ E+ +A+ EH PR + +P Sbjct: 392 --RAAYLAKADLVTSMVYEFPELQGIMGREYALRSGESREVAEAVFEHYLPRFAGDRLPE 449 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S+ADK+D ++ +AI +PSGS+DPYALRR LGI IILE + + L + +E Sbjct: 450 TLPGKILSIADKIDNIVGCFAIGIQPSGSQDPYALRRQALGISHIILEGQAALSLRELVE 509 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ FF RL+ L R +D +EA+L D+ + Sbjct: 510 TAYRGYEGKVELKCSLEKVTADVGEFFEQRLRSILGARGFSYDTVEAVLASGCDDFADTL 569 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L F L R + +++P L +EK L + Sbjct: 570 LRAQALAGFRRDPAFGDLLTVFVRANNL------ARNAFPGQVNPALLEDASEKELNRRL 623 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + ++ K Y + + ++ +P+E FF+ V+V V+DREVR+NRL+LL + + Sbjct: 624 AGVQEEAKRHLEKKDYRSLLAGIATLQKPLEEFFNSVMVMVEDREVRENRLTLLANLAGL 683 Query: 692 ILIVINVQKIV 702 + V ++ KIV Sbjct: 684 VRQVADLSKIV 694 >gi|89074697|ref|ZP_01161155.1| glycyl-tRNA synthetase beta subunit [Photobacterium sp. SKA34] gi|89049461|gb|EAR55022.1| glycyl-tRNA synthetase beta subunit [Photobacterium sp. SKA34] Length = 689 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 218/719 (30%), Positives = 343/719 (47%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +E++P AE + LK + + ++ Y P RL L + GL+ + Sbjct: 5 NFLIELGTEDLPPTALRTLAEAFATNFEAELKAADLPHDGIKWYAAPRRLALKVTGLAEN 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K+ E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 65 QPDKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVDQAERMVTD--KGEWLLFKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L + A+ K+P P+ MRW + +IRP+K++ +L +++ Sbjct: 123 KGQPAQALLPELAAAALAKLPIPRPMRWGDKET-----QFIRPVKTLTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ + + GHRF + + D Y LEE V+ D + R+ IL DA + Sbjct: 173 IEGTILGVASARTIRGHRFMGEAEFTIDNADQYPAILEERGKVMADYDARKAIILADAKK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A AVG + DL+EE+ LVEW V SF++++L +P E + T+K +QK F Sbjct: 233 AAEAVGGIADLEDDLVEEVTSLVEWPVVLTASFEEEFLKVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI VSNI ++D + I+ GN +VV RL DA F Sbjct: 293 AEGKLVPKFIFVSNIISNDP-SQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL L R+ +L+ +F ++GT ++ RI L IA I ADV RA Sbjct: 334 --FNTDLKSKLVDRLPQLET--AIFQKQLGTIKDKTDRITELAGYIADKIGADVDNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEQEDVALALNEQYMPRFAGDQLPSTPVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN D+ L I Sbjct: 450 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYDLDLVDLIAKAHS 508 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 D ++I F R + + D D+I+A+L +K ++ Sbjct: 509 LFGDKLTNDNVDSDVIEFMLGRFRAWYQDAGFSIDVIQAVLAMHPTQPADFDKRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E+ + L+ AEK L ++ ++ Sbjct: 569 FRELDAAESLAAANKRVGNILA---KFDGELPTTVDNSLLVEAAEKELAEKVTAVVAALE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y L S+ EP++ FFD V+V DD +++ NRL+LL ++N L V ++ Sbjct: 626 SVFAAGDYQTALSELASLREPVDAFFDNVMVMADDEKLKVNRLALLSLLRNQFLKVADI 684 >gi|313496432|gb|ADR57798.1| GlyS [Pseudomonas putida BIRD-1] Length = 684 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 207/718 (28%), Positives = 343/718 (47%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ L Sbjct: 5 DFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP + G +A GF + G++ + + + G Sbjct: 65 QPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGVE------LAEIDQSGPKLRFSQHI 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L +++ Sbjct: 119 PGKATVGLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P + + + +Y+ DL +A VL D RR I L Sbjct: 169 VDCTILSQKAGRESRGHRFHHPENVLITTPANYVEDLRKAYVLADFAERRELISKRTAEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 AMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDN 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 289 EGKLLPRFITVANVESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL+ RL +VVF A++GT ++ R+ L IA LI D RA Sbjct: 335 -------QPLETFNERLK--NVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRAGRAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 386 LLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEFAVKQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D I ++ + + L ++ + F Sbjct: 506 FGAKVKAPGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E KR+ +L+ K I+ ++ P+Y E LY+ I +Q Sbjct: 566 RKLPEAEALAAVNKRVSNLLS---KAEGAIAEQVEPKYFDNANEFSLYSAIQQADQAVQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V ++ Sbjct: 623 MAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADI 680 >gi|209696359|ref|YP_002264290.1| glycyl-tRNA synthetase subunit beta [Aliivibrio salmonicida LFI1238] gi|238064847|sp|B6EGT3|SYGB_ALISL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|208010313|emb|CAQ80649.1| glycine-tRNA synthetase, beta subunit [Aliivibrio salmonicida LFI1238] Length = 688 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 215/719 (29%), Positives = 346/719 (48%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + LK G+ +Q ++ Y TP RL L + L Sbjct: 4 NFLIELGTEELPPKALRSLAEAFAANFEAGLKAAGLAHQGIKWYATPRRLALKIAELDEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 64 QADKIVEKRGPAIASAFDADGNPTKAAQGWARGNGITVEQAERLKTD--KGEWLLHKEEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ ++ + A+ +P PK+MRW S +IRP+K++ +L +++ Sbjct: 122 KGQPVKGLVVELAAKALAGLPIPKAMRWGN-----SDIQFIRPVKTLTILL-----GDEL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ + + GHRF + S D Y LEE V+ D + R+ IL A + Sbjct: 172 IEGTILGVASTRTIRGHRFMGESEFTIDSADQYPAILEERGKVMADYDARKAIILAGAKK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A AVG + +L+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAEAVGGIADLEDELVEEVTSLVEWPVVLTAKFEQEFLNVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +E L FI V+NI++ + I++GN +VV RL DA F Sbjct: 292 QEKNLLPNFIFVTNIESKEP-RHIIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIGADVEKSQRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDAQVALALYEQYMPRFAGDDLPSTDVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 +V++ADKLDTL+ + I + P GS DP+ALRRA LGI+RII+E ++ L + Sbjct: 449 ASVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGILRIIVEKGYNLDLVDLVAKAQS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 D ++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDKLTNANVDTDVIDFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRELDAAESLAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKVLAEKVEILAEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 625 PVFIAGNYQEALSRLAELREPVDAFFDGVMVMADDEALKLNRLTLLNKLRNLFLDIADI 683 >gi|146223|gb|AAA23915.1| glycyl-tRNA synthetase beta subunit [Escherichia coli] Length = 689 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 210/723 (29%), Positives = 341/723 (47%), Gaps = 71/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAPEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW SA +++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SAAAFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L + V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRDGGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFW-----KRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ KRD++NLP L + Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRKKRDEDNLPRLQT- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 352 --------------------------VLFQQQLGTVRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|152972429|ref|YP_001337575.1| glycyl-tRNA synthetase subunit beta [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897022|ref|YP_002921768.1| glycyl-tRNA synthetase subunit beta [Klebsiella pneumoniae NTUH-K2044] gi|262040630|ref|ZP_06013868.1| glycyl-tRNA synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|166227916|sp|A6TFH4|SYGB_KLEP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|150957278|gb|ABR79308.1| glycyl-tRNA synthetase beta subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549350|dbj|BAH65701.1| glycyl-tRNA synthetase beta subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041994|gb|EEW43027.1| glycyl-tRNA synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 689 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 211/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVANLAAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMIASSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + IP + GHRF + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKADAQEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +D+ L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLDLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA ++ +I + L AE +L + +Q Sbjct: 571 RTLEESSALAAANKRVSNILAKSDETLNDI---VHASVLKEAAEIKLAGNLVVLRDKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V ++ Sbjct: 628 YFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQVADI 685 >gi|255319852|ref|ZP_05361057.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SK82] gi|262380383|ref|ZP_06073537.1| glycyl-tRNA synthetase beta subunit [Acinetobacter radioresistens SH164] gi|255303171|gb|EET82383.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SK82] gi|262297829|gb|EEY85744.1| glycyl-tRNA synthetase beta subunit [Acinetobacter radioresistens SH164] Length = 689 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 215/720 (29%), Positives = 358/720 (49%), Gaps = 68/720 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLAFDSIEAYAAPRRLALKIVNVDGAQA 66 Query: 65 EKIEERLGPRVGA-----GK--KAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRK 115 + + GP V A GK KA++GF+R G+ +S Q K K + L+ Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGISIDQVSTFQAGKVEK-----VCYLKD 121 Query: 116 PKRLIEDVL-KTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K DVL I+ A+ +P K MR + + + ++RP+K + +L+ +D + Sbjct: 122 VKGQSLDVLLPQILQTALDHLPVAKRMRSAASRT-----EFVRPVKWV--VLLKDD---Q 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I+ +++ N+TYGHRFHAP I + + D Y+ L A V+ E R+ I Sbjct: 172 VIEATIQDHTAANVTYGHRFHAPDAITLANADAYLDALRAAKVVASFEERQAIIDQQVKA 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA V + DL +E+ LVEW SF++++L +P+E + T++ NQK F Sbjct: 232 LADEVNAIAIVPADLRDEVTSLVEWPVALRASFEERFLAVPQEALITTMQDNQKYFCLVN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI+ S I++GN +VV RL DA F+ +DQ Sbjct: 292 SDHKLQPYFITVSNIE-SKAPKQIIEGNEKVVRPRLSDAEFFFLQDQK------------ 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L ++VF A++GT ++ RI +L ++ + A VA +RA Sbjct: 339 --------QPLASRSEKL--ANMVFQAQLGTLWDKTVRIAMLAVELTKFTGAQVADAERA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFPELQG G YA L+ EN +A+ E P+ + +P K Sbjct: 389 AMLSKCDLTSELVGEFPELQGIAGTYYARLEGENDEVAEALGEQYLPKFAGDVLPKTKTG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------- 525 T++LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN +++ + Sbjct: 449 TTIALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENNLNVTIEALVNSALH 508 Query: 526 --SQFIEDQN-----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 I D N + F R + D+ ++ D+I+A+ + L + +N Sbjct: 509 AYGALITDPNKTRSVAVAFLEGRYRAKYEDQGVQVDVIQAVQAMSPASPLDFDKRVNAVN 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA E + +E + L+ +AEK L+A ++ + Sbjct: 569 HFRNLPEAAALAAANKRVANILAKEAAPEGSV-VEAN---LVEDAEKALFAELAKITPVV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ P++ FFD V+V DD E++ NRL +L ++++ V ++ Sbjct: 625 EPLFAAKDYTAALSALAALRVPVDAFFDGVMVMADDAELKANRLRMLAQLRDLFTKVADI 684 >gi|160896736|ref|YP_001562318.1| glycyl-tRNA synthetase subunit beta [Delftia acidovorans SPH-1] gi|238687203|sp|A9BXZ8|SYGB_DELAS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160362320|gb|ABX33933.1| glycyl-tRNA synthetase, beta subunit [Delftia acidovorans SPH-1] Length = 704 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 222/751 (29%), Positives = 361/751 (48%), Gaps = 103/751 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L LK +G++ + + Y +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAGVLFEQLKAQGLLASSEARLTAYASPRRLAAHITEV 64 Query: 60 SPHSPEK-IEERLGP--------------------RVGAGKKAIDGFLRSTGLQTISDCQ 98 P + +K + ++L P +GAG++A+ G R + ++ Sbjct: 65 LPQAEDKAVSQKLMPVSVGLDADGKPTPALIKKLAALGAGEEAVAGLTRQG--EGKAEAL 122 Query: 99 IKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPISA 152 +G V LA D ++ + AI K+P PK MR WS+ H Sbjct: 123 FHSSTVRG-VMLA----------DGVQKALDEAIAKLPIPKVMRYQLADGWSSVH----- 166 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRD 211 ++RP ++ + E +I + + G T+GHRF A P+ ++S D Y Sbjct: 167 --FVRPAHGLVVL----HGTEVLIGVKALGLTAGTATHGHRFEAAVDPVVIRSADDYAAQ 220 Query: 212 L-EEAMVLLDPECRRNAILND----AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGS 266 L EE V+ RR I A RL G+ +ED+ LL+E+ LVE V + Sbjct: 221 LREEGAVIASFAERRAEIARQLQAAAERLGG--GVRPIEDEALLDEVTALVERPNVLVCE 278 Query: 267 FDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVV 326 F+K++L +P+E + LT+K NQK F G L + F++VSNI D +A++ GN RVV Sbjct: 279 FEKEFLDVPQECLILTMKANQKYFPLLDAAGKLTHQFLVVSNISPQDA-SAVIGGNERVV 337 Query: 327 AARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQ 386 RL DA F+ DQ+ L+S E K VV+H K+GTQ Sbjct: 338 RPRLADAKFFF--DQDRKKTLASRVEGLGK--------------------VVYHNKLGTQ 375 Query: 387 GERVSRIRVLGKKIA-QLIDADVAL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVL 444 GERV R+R + K IA QL D +A D A L+K DL T++V EFPELQG +G+ YA+ Sbjct: 376 GERVERVRSIAKSIARQLGDTGLAQQADLAAQLAKTDLVTDMVGEFPELQGTMGRYYALN 435 Query: 445 QNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYA 504 +++ DAIE+H KPR + +P + V+LADKL+TL+ + I P+G +DP+A Sbjct: 436 DGLDVAVADAIEDHYKPRFAGDELPRGNAGVVVALADKLETLVGMFGIGNLPTGDRDPFA 495 Query: 505 LRRATLGIIRIILENKIDIPLSQF-----------IEDQN--LILFFHDRLKLYLHDRDI 551 LRR LG+IR+++E + + L IED L F +DRL L ++ Sbjct: 496 LRRHALGVIRMLVEKDLALDLETLLVSVLPAFGDKIEDATPQLADFIYDRLAGNLREQGF 555 Query: 552 RHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 ++++L L + ++ + F + + KR+ IL +K ++ + Sbjct: 556 SAQEVDSVLALRPQRLSDVQKRLEAVRAFGELPEAPALAAANKRVGNIL---KKADQAVQ 612 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVN 671 ++ L AEK LYA + Q+ Y L ++ P++ FF+ V+VN Sbjct: 613 AQVDAAVLAEVAEKDLYAALQSVAPKAQQQFAAGDYTASLQTLAALRAPVDAFFEHVMVN 672 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +D ++ NRL LL + + V ++ ++ Sbjct: 673 AEDPALKANRLGLLATLHEAMNRVADLSRLA 703 >gi|26986805|ref|NP_742230.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida KT2440] gi|38258507|sp|Q88RR9|SYGB_PSEPK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24981401|gb|AAN65694.1|AE016196_5 glycyl-tRNA synthetase, tetrameric type, beta subunit [Pseudomonas putida KT2440] Length = 684 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 208/718 (28%), Positives = 344/718 (47%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ L Sbjct: 5 DFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP + G +A GF + G++ +I + K + Sbjct: 65 QPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGVEL---AEIDQSGPKLRFSQHI--- 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L +++ Sbjct: 119 PGKATVGLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P + + + +Y+ DL +A VL D RR I L Sbjct: 169 VDCTILSQKAGRESRGHRFHHPENVLITTPANYVEDLRKAYVLADFAERRELISKRTAEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 AMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDS 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 289 EGKLLPRFITVANVESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL+ RL +VVF A++GT ++ R+ L IA LI D RA Sbjct: 335 -------QPLETFNERLK--NVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRAGRAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 386 LLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEFAVKQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D I ++ + + L ++ + F Sbjct: 506 FGAKIKAPGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E KR+ +L+ K I+ ++ P+Y E LY+ I +Q Sbjct: 566 RKLPEAEALAAVNKRVSNLLS---KAEGAIAEQVEPKYFDNANEFSLYSAIQQADQAVQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V ++ Sbjct: 623 MAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADI 680 >gi|313123891|ref|YP_004034150.1| glycyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280454|gb|ADQ61173.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 688 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 218/731 (29%), Positives = 359/731 (49%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 4 DFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTILVKELDEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ S I + KG Y V ++ Sbjct: 64 QADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGM---SADDIYFEELKGVEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +++L + V ++ + +P MRW + F ++RP+ ++ + +E Sbjct: 121 KAGKEAKEILLGLDEV-VKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLGDSVV-LANADDYVEALRDQYVIVDADERKDMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LINSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINCFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + R+D V FH KIG+ E+++R+R++G +A+ L +VA Sbjct: 336 --------YPLSHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYARLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q + Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL +K + + P +E+ LY + Sbjct: 566 AAAKVLQQHHDDKAFKPVVESLTRIANIL---KKAKFSQASPVDPSLFEDRSEQDLYNGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + DH ++ L + I+ +FD ++ D V++NRLS L + ++ Sbjct: 623 E----ALANVKDHAELYEAFVALQGV---IDRYFDVNMIMAKDEAVKNNRLSQLVAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|125718677|ref|YP_001035810.1| glycyl-tRNA synthetase subunit beta [Streptococcus sanguinis SK36] gi|229558583|sp|A3CQ05|SYGB_STRSV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|125498594|gb|ABN45260.1| Glycyl-tRNA synthetase beta chain, putative [Streptococcus sanguinis SK36] Length = 679 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 216/714 (30%), Positives = 359/714 (50%), Gaps = 88/714 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLGKE-TEISSADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D++LL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDENLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGE---RVSRIRVLGKKIAQLIDAD 407 ++A D+++ V FH KIG+ E R +I L K A L + Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAKEAGLDANE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR D++ A+L+ N + DL Sbjct: 502 LLGRLYGLKFDSLSYDNQEAVLDFFRARVE-KMMDRSTPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS- 632 ++ A+ + F + + + ++ + EK + + I+P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--INPALFENQEEKDLAAAIEK 615 Query: 633 -DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + + +MD L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLAANMDQ---------LFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|113460624|ref|YP_718690.1| glycyl-tRNA synthetase subunit beta [Haemophilus somnus 129PT] gi|123131976|sp|Q0I273|SYGB_HAES1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|112822667|gb|ABI24756.1| glycyl-tRNA synthetase beta chain [Haemophilus somnus 129PT] Length = 688 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 209/719 (29%), Positives = 351/719 (48%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEQELNQAGLAFEKVEWFAAPRRLAVKVLGLAEA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKQVEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERLSTDKGEWLVHRAVIEG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L +++L I+ A+ +P PK+MRW ++RP+ ++ + A+ + Sbjct: 125 --QLTKNLLVGIIDKALAGLPIPKTMRWGDKTE-----QFVRPVHTVTLLFGAD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF + D Y + L+E V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTVRGHRFLGEREFSLDHADQYPQLLKERGSVVADFNERKALILATSRE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G +++LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEELLEEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPDDP-SKIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD RA Sbjct: 334 --FKTDLKQKLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADQTKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEDVAVALNEQYMPRFAGDTLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +V+LADK+DTL + I + P GS DP+ALRRA LG +RII+E + + L+ + Sbjct: 450 CSVALADKIDTLTGIFGIGQSPKGSADPFALRRAALGCLRIIVEKNLPLDLADIVAKATA 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + I D+I+++L ++ ++ Sbjct: 510 LFGDKLTNKNVVDEVVDFMLGRFRAWYESEGIAVDVIQSVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI L + + AEK L + +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADIAIGEIDLGVCVE----SAEKTLAEAVLALKGEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y + D L ++ +PI+ FFD V+VNV+++ +R NRL++L ++N+ L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRQPIDAFFDGVMVNVEEQTLRQNRLAILSTLQNLFLQVADI 684 >gi|146280406|ref|YP_001170559.1| glycyl-tRNA synthetase subunit beta [Pseudomonas stutzeri A1501] gi|166227921|sp|A4VFG6|SYGB_PSEU5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145568611|gb|ABP77717.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Pseudomonas stutzeri A1501] Length = 684 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 214/722 (29%), Positives = 349/722 (48%), Gaps = 66/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + K A+ + LK+ G+ + + Y P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALAKLADAFCAGIEKGLKDAGLGFAKAQAYAAPRRLAVLVEQLATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP + G +A GF R G+ +I + K + + Sbjct: 65 QPDRSINLDGPPMQAAFDAHGEPTQAALGFARKCGVDL---AEIDRSGPKLKFSRTIEGQ 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L IV ++ +P PK MRW+ ++RP + ++ + E++ Sbjct: 122 PA---TQLLPGIVEASLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLF-----GEQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID ++ G + GHRFH+P + + Y+ DL A V+ D RR I +L Sbjct: 169 IDCEILAQRAGRESRGHRFHSPGQVHISKPSSYLEDLRGAHVIADFAERRELIAKRVEQL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ASEQNGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFCLLDT 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 289 NGKLLPRFITVANIESKDP-AQIVSGNEKVVRPRLTDAEFFFKQDKK------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL++ RL +VVF A++GT ++ R+ L IA+ D A RA Sbjct: 335 -------QPLERFNDRLK--NVVFQAQLGTVFDKAERVSRLAGLIAERTGGDKARAMRAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSKADL TE+V EFPE+QG G YA+ + E A+ E PRG +P+ Sbjct: 386 LLSKADLATEMVGEFPEMQGIAGYYYALNEGEPEDVALALNEQYMPRGAGGELPSTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQ 527 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L Q Sbjct: 446 AVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLVEAVNFAIGQ 505 Query: 528 F--------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F + DQ ++ F DRL+ D + ++ + + L ++ + Sbjct: 506 FGTQVKSAGLADQ-VLEFIFDRLRARYEDEGVDVAAYLSVRAVQPGSALDFDQRVQAVQA 564 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + E + KR+ +LA E K E + P++ E LY+ + +Q Sbjct: 565 FRTLPEAEALAAANKRVSNLLAKFEAKLPEA---VEPRWFDNATEFSLYSALQQAEQAVQ 621 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++Y + + L + P++ FF+ VLVN +D VR NR +LL ++ + L V ++ Sbjct: 622 PLAAARQYREALERLAHLRGPVDAFFEAVLVNAEDASVRANRYALLARLRGLFLGVADIS 681 Query: 700 KI 701 + Sbjct: 682 AL 683 >gi|257898049|ref|ZP_05677702.1| glycyl-tRNA synthetase [Enterococcus faecium Com15] gi|257835961|gb|EEV61035.1| glycyl-tRNA synthetase [Enterococcus faecium Com15] Length = 694 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 217/734 (29%), Positives = 358/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 7 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 67 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 123 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 124 THGKEAKEVLTGLAGV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 173 VIPFEILDVKTGRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 232 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 291 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 292 DQGMLLPHFISARNGDRVKLEN----VVRGNQKVLTARLEDAEFF--------------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + ++ Sbjct: 333 -----YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEEL 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 386 MDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGEL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 446 PQSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 505 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 506 QETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLT 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E++P+ +AEK L+ Sbjct: 566 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAQLEKQSEVNPELFENDAEKELH 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 623 KAVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQI 678 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 679 AAMALSLASLDQII 692 >gi|118602708|ref|YP_903923.1| glycine--tRNA ligase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|229558575|sp|A1AWZ5|SYGB_RUTMC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|118567647|gb|ABL02452.1| glycyl-tRNA synthetase beta chain [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 678 Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 207/714 (28%), Positives = 359/714 (50%), Gaps = 57/714 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ EE+P + + + + L L + + Y ++ + TP RL + + L Sbjct: 5 DFLLELGCEELPPKCLQQLSNAFTHNLTTELDKLKLSYSSVESFATPRRLAVLVSNLQLQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 ++I ER GP + A + I+GF +S G+ + ++K K Y ++ D Sbjct: 65 QNDQIIERKGPSISAFDQDIEGFAKSCGVA--KNVLVQKTFGKTQYYFFTKQQKGLKTID 122 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L++ V +AIQ + K MRWS + ++RP ++ +L ++ I+ L Sbjct: 123 LLESTVDIAIQNISIIKPMRWSNLDT-----YFVRPTHWLIMMLGSDVVPASIMGL---- 173 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 GN T G RF + Y + L E A + +D R+ I ++A Sbjct: 174 -ASGNTTRGLRFTGERIFDITCAKDYQKILLERAQIEVDFNTRKEIIRKQVIQVAKNNNA 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 V D+ LL+E+ LVE+ + F G+F K+L +PEE + +K++QK F +G L Sbjct: 233 IAVIDESLLDEVCALVEYPRAFSGNFSSKFLDVPEEALISAMKSHQKYFHMLDVDGNLMP 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI V+NI++S+ + I+ GN RV+ +RL D+ FW +D+ Sbjct: 293 VFISVANIESSNL-SVIIDGNERVIRSRLADSEFFWTQDK-------------------- 331 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 + L+ R+ +L+ V+F +G+ G+++ RI + IA +I A+V RA +L K+D Sbjct: 332 AHTLESRLDKLNQ--VLFMKSLGSMGDKIKRIEIFSGYIATVIGANVKDSARAGLLCKSD 389 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EF +LQG +G YA+ EN + AI EH PR +++P + V++AD Sbjct: 390 LVTDMVGEFADLQGVMGGYYALNDGENKAVASAISEHYHPRFSGDSLPNTSEGLAVAIAD 449 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--------- 532 KLDT+ I + P+GSKDPYALRR LG++RI++E+K+++ L + I Sbjct: 450 KLDTVTGIIGIGQGPTGSKDPYALRRMALGLLRIMIESKLNLNLKELISKSLNENSSAVN 509 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ F RL+ Y ++ + + EA+L ++ ++ LN F ++ E Sbjct: 510 INSVDDIYQFMMRRLRAYYKEQKVNIQVFEAVLAVCPESPYDFHLRVEALNTFTNNQAFE 569 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + + KRI IL K + +++ L+ AEK L+ I S ++ + Sbjct: 570 NLIETNKRIANIL----KNYSNLLIKVDDSALVEVAEKALFKATKSLSKRILNSTNYTK- 624 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 I +L+ + + I+ FFD+V+VN DD +R RL+L+ +++++ L V +V + Sbjct: 625 -NIQELI-AFKDIIDEFFDKVMVNTDDVVLRQARLNLINWVRSLFLSVADVSHL 676 >gi|301154902|emb|CBW14365.1| glycine tRNA synthetase, beta subunit [Haemophilus parainfluenzae T3T1] Length = 688 Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 215/721 (29%), Positives = 350/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVDQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNGIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA + EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP------AEKALSEAVLALRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAKGDYTAVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|254804255|ref|YP_003082476.1| glycyl-tRNA synthetase beta chain [Neisseria meningitidis alpha14] gi|254667797|emb|CBA03763.1| glycyl-tRNA synthetase beta chain [Neisseria meningitidis alpha14] Length = 687 Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 211/660 (31%), Positives = 340/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGGLLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + E+ V Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSGNKTLGHRFLSNGEITIENADSYAEQMREQGKVE 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEQTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|240948882|ref|ZP_04753238.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor NM305] gi|240296697|gb|EER47308.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor NM305] Length = 689 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 214/720 (29%), Positives = 351/720 (48%), Gaps = 63/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATS 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ + G+ +I D + V+ AV+ Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L ++ A+ K+P PK+MRW ++RP+ ++ +L ++ Sbjct: 125 QPTK---NLLVGMISNALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ I G GHRF ++ D Y L+E V+ D R+ IL A Sbjct: 172 LIEGEILGIASGTTIRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI VSNI D + I++GN +VV RL DA F Sbjct: 292 DKEGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F DL + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD R Sbjct: 334 ---FKTDLKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 449 ASSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 KLFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISSEIDRTLLVEAEEKALAEQVITLQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 626 APLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEDPKLRQNRQAILNNLRNLFLQVADI 685 >gi|167621947|ref|YP_001672241.1| glycyl-tRNA synthetase subunit beta [Shewanella halifaxensis HAW-EB4] gi|189082274|sp|B0TLA9|SYGB_SHEHH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|167351969|gb|ABZ74582.1| glycyl-tRNA synthetase, beta subunit [Shewanella halifaxensis HAW-EB4] Length = 689 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 225/718 (31%), Positives = 357/718 (49%), Gaps = 69/718 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + + +P RL + + L+ Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLANFTEELTKAELSFDSAVWHASPRRLAICINQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L R Sbjct: 65 QADKVVEKRGPAIAQAFDADGNPTKAAQGWARGNGISVEQAERLKTD--KGEWLLHQARV 122 Query: 115 ---KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + K LI D+ + ++ K+P PK MRW + + +IRP+ ++ +L +E Sbjct: 123 VGVETKSLIADMAQR----SLDKLPIPKPMRWGSNTT-----QFIRPVHTVTMLLGSE-- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +++ +L I + GHRF ++ D+Y+ L+E VL D + R+ I Sbjct: 172 ---VVEGELLGIKSDRVIRGHRFMGESSFELDHADNYLVALKEKGKVLADYQARKAIIKT 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLEDDLLEEVTSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F++ D+ Sbjct: 289 PVFDNAGQLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFETDK--------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 KES L+ R+A L+ VVF ++GT +RV RI L IA I+A+ Sbjct: 339 KES-----------LEARLASLET--VVFQKQLGTIKQRVERISALAGYIATSINANSEE 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT Sbjct: 386 AARAGLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALAEQYKPKFSGDTVPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----- 525 ISI V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L Sbjct: 446 APISICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIA 505 Query: 526 -SQFIEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +Q + +NL + FF R + + D+ + D+I A+L IK Sbjct: 506 KAQELHGENLTNENVAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFESRIK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ ILA K E+ I + L+ EAEK L A +++ Sbjct: 566 AVAHFRTLEQASALAAANKRVSNILA---KVEGELPAAIDDKLLVEEAEKALAAKLAELQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y + LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L Sbjct: 623 PQLAPLFAAANYQEALALLASLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFL 680 >gi|332362956|gb|EGJ40745.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK49] Length = 679 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 217/712 (30%), Positives = 360/712 (50%), Gaps = 84/712 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLGKE-TEIASADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ +SLADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLSLADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR I D++ A+L+ + + DL Sbjct: 502 LLGRLYELKFDSLSYDNQAAVLDFFRARVE-KMMDRSIPKDIVTAVLQSTH---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ A+ + F + + + ++ + EK + + ++P + EK L A I + Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGKTA--VNPALFENQEEKDLAAAIEE 615 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + D D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLAADL-------DQLFALSPVIDAFFDHTMVMAEDETVRNNRLALL 660 >gi|302879305|ref|YP_003847869.1| glycyl-tRNA synthetase, beta subunit [Gallionella capsiferriformans ES-2] gi|302582094|gb|ADL56105.1| glycyl-tRNA synthetase, beta subunit [Gallionella capsiferriformans ES-2] Length = 703 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 213/736 (28%), Positives = 358/736 (48%), Gaps = 74/736 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K E S +L L + ++ + + +P RL ++++G+ Sbjct: 5 NLLVELFVEELPPKSLKKLGESFSQVLSASLVAQNLVLPGTEITSFASPRRLAVHVEGVI 64 Query: 61 PHSPEK-IEERLGP-RVG--AGKKAIDGFLR-----STGLQTISDCQIKKDPKKGDVYLA 111 + +K + +L P +VG A A L+ + +S + + D K +Y Sbjct: 65 AQAADKSVSLKLMPVKVGLDAAGNATPALLKKLAGLGADVSVVSSLRTEMDGKAEALYFD 124 Query: 112 VLRKPKRLIEDVLKTI------VPVA-IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 L +L++ + + + +P+A + P P WST + ++RP S++ Sbjct: 125 SLVPGVKLVDGLQRALNDALAKLPIARVMTYPDPTGDGWSTVN-------FVRPAHSLVA 177 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPE 222 + KI+ + + + GN+T GHRF A I ++ D Y R LE E V+ Sbjct: 178 LY-----GRKIVPVSVLGLTAGNVTQGHRFEASVDAIVLEDADSYARQLETEGAVIASFA 232 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 RR I+ ++A+ GL+ + D DLL+E+ LVE V MG F++ YL +P E + LT Sbjct: 233 QRRAEIVRQLAKMAAKEGLQAIHDDDLLDEVTALVERPNVLMGRFEETYLEVPPECLILT 292 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 +K NQK F G L+N F++VSNI D + ++ GN RVV RL DA F+ +D+ Sbjct: 293 MKANQKYFPLLEVSGRLSNKFLIVSNISPKDA-SLVIGGNERVVRPRLADAKFFFDQDRK 351 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 KPLD R+ L + VV+H K+GTQGERV R++ + + I Sbjct: 352 --------------------KPLDARV--LGLSRVVYHNKLGTQGERVERVQAIARAIGM 389 Query: 403 LIDADVALVDRAIVLSKADLC--TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + + + A T++V EFPELQG +G+ YA AIE+H K Sbjct: 390 QLGGEAQALQADQAALLAKADLLTDMVGEFPELQGIMGRYYAQHDGLTDEVAFAIEDHYK 449 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P N I V+LADKL+TL+ + I + P+G +DP+ALRR LG+IR+++E + Sbjct: 450 PRFAGDTLPRNSTGICVALADKLETLVGMFGIGQIPTGDRDPFALRRHALGVIRMLVEKQ 509 Query: 521 IDIPLSQFIE------DQNLI--------LFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 + + L+ + + L+ F DR+ + ++ + ++A+L P Sbjct: 510 LPLTLTDLVAGAFAGFSKGLLADAQAEVETFIFDRIGGMMREQGYTANQVDAVLAPRPQR 569 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 L I + + F + + + KR+ IL +K E+S+E+ L+ +AE Sbjct: 570 LSEIPMRLDAVRAFAALPESAALAAANKRVGNIL---KKVEGEVSVEVDRARLVEDAELA 626 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY + T + Y L ++ P++ FFD V+VN DD +R NRLSLL Sbjct: 627 LYQALQSIATDADAAFAAGDYTTSLQALAALRAPVDAFFDSVMVNADDPALRANRLSLLA 686 Query: 687 YIKNIILIVINVQKIV 702 + + V ++ ++ Sbjct: 687 RLHQAMNRVADLSRLA 702 >gi|325135523|gb|EGC58141.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M0579] Length = 687 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 211/660 (31%), Positives = 341/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + E+ V Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSGNKTLGHRFLSNGEITIENADSYAEQMREQGKVE 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|194467795|ref|ZP_03073781.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus reuteri 100-23] gi|194452648|gb|EDX41546.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus reuteri 100-23] Length = 691 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 212/732 (28%), Positives = 371/732 (50%), Gaps = 80/732 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + LKE+ + + +++++ TP R+ L + GLS Sbjct: 5 YLLEVGVEEMPAHVVTPSIKQLHARVEKYLKEQRITFDDIQEFATPRRMALLIHGLSDKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G ++ D + K+ KG Y+ V + Sbjct: 65 PDIDESVKGPARKIAQNADGNWTKAAIGFTRGQG-ASVEDIEFKE--VKGVEYVFVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +VL+ + P I + +P M+W + +IRP++ ++ +L +++ Sbjct: 122 AGKTVAEVLQGL-PAVITSMTFPTLMKWGYNN-----LQFIRPIRWLVSLL-----NDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ ++ G T GHRF HP+++ D Y L V+ D R+N I + ++ Sbjct: 171 VPFNILDVEAGRETQGHRFLG-HPVEIAKADDYEETLNNDFVIADQTKRKNLIKDQITKI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + ++ D+DLLEE+ LVEW F GSFD+KYL LP+ ++ ++K NQ+ F R Sbjct: 230 INENNWQVDWDEDLLEEVNNLVEWPTAFAGSFDEKYLALPDPVLITSMKDNQRFFCVRDE 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L + FI V N +D +++GN RV+ RLEDA F++ DQ Sbjct: 290 DGNLLSHFISVRN-GNTDYLDNVIKGNERVLVPRLEDAQFFYQEDQ-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADVALV 411 +D+ + RL V FH KI + +++ R+ VLGK++ L D ++A + Sbjct: 335 ------KLTIDEYVERLKK--VSFHDKISSMYDKMQRVAVIANVLGKQL-NLSDEELADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 386 DRAAHIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKDDVATAIREHYMPISAEGELPQT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----SQ 527 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + +PL S+ Sbjct: 446 KIGAVLAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADRGWHLPLLNIQSE 505 Query: 528 FI----------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I + FF DR+K H + +RHD+I+A +++ ++ Sbjct: 506 IIPAFETAEINVSFDLNKNSDEVRSFFLDRIKQLFHGQKVRHDIIDAATDTRQNDIANVL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS-LEISPQYLLLEAEKRLYAV 630 I+ +++ + F + + ++L I +K NR +S L + P +E +++ Sbjct: 566 AAIQTIDD---HKDDDSFKEDIEALTRVLRIAKKDNRPVSELAVDPNLFENPSEAKMHTA 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +S+ I+E D + + L ++ I +FD+ ++ + ++R+NRL+ L + + Sbjct: 623 VSEL---IKE--DQQTVSENFAALRTLTPIISEYFDENMIMDKNEDIRNNRLAQLSILAH 677 Query: 691 IILIVINVQKIV 702 ++ N+ ++ Sbjct: 678 QASLIGNLDNLI 689 >gi|330500955|ref|YP_004377824.1| glycyl-tRNA synthetase subunit beta [Pseudomonas mendocina NK-01] gi|328915241|gb|AEB56072.1| glycyl-tRNA synthetase subunit beta [Pseudomonas mendocina NK-01] Length = 684 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 212/715 (29%), Positives = 343/715 (47%), Gaps = 58/715 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + + LK G+ Y R Y P RL + ++ L Sbjct: 5 DFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLGYAASRVYAAPRRLAVLIEQLEEQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK----PKR 118 ++ GP + A A DG L C + D + D A LR P + Sbjct: 65 QADRSMNLDGPPIQAAFDA-DGNPTQAALGFARKCGV--DIAEIDRSGAKLRFAQHIPGQ 121 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 ++L TIV ++ +P PK MRW+ ++RP + ++ + + ++D Sbjct: 122 PAVNLLPTIVQDSLDDLPIPKRMRWAARRD-----EFVRPTQWLVMLF-----GDAVVDC 171 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 ++ G ++ GHRFHA +++ S Y DL A VL D RR I + LA+A Sbjct: 172 EILAQKAGRVSRGHRFHANRDVRISSPASYAEDLRSAYVLADFAERREIISHRVDELAAA 231 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 + LL+E+ LVEW + SF++++L +P+E + T++ NQK F G Sbjct: 232 EQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFCLLDANGK 291 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+N+++ D A IV GN +VV RL DA F+K+D+ K+ FN Sbjct: 292 LLPRFITVANVESKDP-AQIVSGNEKVVRPRLTDAEFFFKQDK---------KQKLEGFN 341 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 QR+A +VVF A++G+ ++ R+ L IA+ + D RA +LS Sbjct: 342 --------QRLA-----NVVFQAQLGSVFDKAQRVSALAGFIAREVGGDAQRAARAGLLS 388 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL TE+V EFPE+QG G YA+ E+ A+ E PRG +P+ V+ Sbjct: 389 KCDLATEMVSEFPEMQGIAGYYYALNDGESQDVALALNEQYMPRGAGAELPSTLTGAAVA 448 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 +ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E +D+ L+ ++ Sbjct: 449 VADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDFAVAQYAG 508 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++ F DRL+ D I + +A+ + L ++ + F Sbjct: 509 KVKTDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQAVQAFRKL 568 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ +L+ K ++ ++ Y +E L+A I +Q Sbjct: 569 PQAAALAAANKRVSNLLS---KAEGGVAAQVEAHYFDNPSEFALHAAIQQADHAVQPLAA 625 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L S+ EP++ FF+ VLVN +D VR NR +LL ++ + L V ++ Sbjct: 626 ARQYSEALAKLASLREPVDAFFEAVLVNAEDPRVRANRYALLARLRGLFLGVADI 680 >gi|296107432|ref|YP_003619132.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|295649333|gb|ADG25180.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila 2300/99 Alcoy] Length = 688 Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 197/702 (28%), Positives = 348/702 (49%), Gaps = 60/702 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSAGNPTPALLGFAKSCGVTV--DALTKTQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 LG-----VTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI AS +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNI-ASSNPKQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + + V+F K+G+ ++V RI+V+ ++Q ++ L +RA Sbjct: 338 -------QPLSAHIPSTE--QVIFQVKLGSVYDKVQRIKVMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAVVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 +SL D++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I Sbjct: 449 ALSLVDRMDTLVGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 530 ------EDQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +D+NL+ F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 Y + LL S+ EP++ FFD V+V V++ ++ NR Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNR 668 >gi|77408169|ref|ZP_00784914.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] gi|77173184|gb|EAO76308.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] Length = 679 Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 217/700 (31%), Positives = 359/700 (51%), Gaps = 82/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL ++ D + ++ + VY+ K I DVL + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGL-SVDDIEFREVKGEEYVYVTKHETGKSAI-DVLAS 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I G Sbjct: 133 VTEV-LTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + D Sbjct: 182 RISRGHRFLGS-DTEISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL-DLSKPL 365 N A + +++GN +V+ ARLED FW+ DQ K N+ DL + L Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQ--------------KLNIADLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 Q V FH KIG+ E + R++V+ + +A L D + V RA + K DL Sbjct: 346 KQ---------VTFHEKIGSLYEHMDRVKVISQHLADKAGLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +I ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRIGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE-FFSSAKGE 587 + ++ F R++ + + + D+ EA+L E+D IV LI ++ +K Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVL--ESDTY--IVSLILEASQALVQKSKDA 571 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHK 645 ++ +S + + + + EK +S++ S L E EK LY I + E M Sbjct: 572 QYKVSVESLSRAFNLAEKVTHSVSVDSS----LFENNQEKALYQAI--LSLELTEDM--- 622 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 H D L ++ I FFD +V DD +++ NRL+LL Sbjct: 623 --HDNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALL 660 >gi|69247288|ref|ZP_00604289.1| Glycyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] gi|258616600|ref|ZP_05714370.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] gi|68194910|gb|EAN09380.1| Glycyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] Length = 691 Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 220/735 (29%), Positives = 357/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ +I + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 VIPFEILDIKTDRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRKEMIITQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPYFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 329 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 330 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 382 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGD 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 442 LPETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSV 501 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 502 LQETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDL 561 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ EAEK L Sbjct: 562 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKEL 618 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + T + ++ Y Q L S+ IE +FDQ +V ++ VR+NRL+ L Sbjct: 619 HKAVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRENRLTQLNQ 674 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 675 IAAMALSLASLDQII 689 >gi|148828101|ref|YP_001292854.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittGG] gi|166227915|sp|A5UI65|SYGB_HAEIG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148719343|gb|ABR00471.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittGG] Length = 688 Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 212/719 (29%), Positives = 349/719 (48%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLAKQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L ++ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGRLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I D A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGTDEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIEVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTVCVE----QAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADI 684 >gi|257884091|ref|ZP_05663744.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257819929|gb|EEV47077.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 694 Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 218/734 (29%), Positives = 358/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 7 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 67 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 123 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 124 THGKESKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 173 VIPFEILDVKTGRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G +++KYL +PEE++ ++K +Q+ F R Sbjct: 232 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDYEEKYLSVPEEVLVTSMKEHQRYFEVRN 291 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 292 DQGMLLPHFISARNGDRVKLEN----VVRGNQKVLTARLEDAEFF--------------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + ++ Sbjct: 333 -----YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEEL 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++ Sbjct: 386 MDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 446 PETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 505 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 506 QETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLT 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E+ P+ EAEK L+ Sbjct: 566 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKELH 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 623 KAVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQI 678 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 679 AAMALSLASLDQII 692 >gi|260893578|ref|YP_003239675.1| glycyl-tRNA synthetase, beta subunit [Ammonifex degensii KC4] gi|260865719|gb|ACX52825.1| glycyl-tRNA synthetase, beta subunit [Ammonifex degensii KC4] Length = 690 Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 234/735 (31%), Positives = 361/735 (49%), Gaps = 82/735 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLEI +EE+PAR+ EDL LL+E + Y+ ++ + TP RL L +KGL+ Sbjct: 1 MRDFLLEIGTEEMPARLLSSILEDLREKAQELLREARLSYREIKTFGTPRRLVLLVKGLA 60 Query: 61 PHSPEKIEERLGP--RV-----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP RV G KA GF RS G++ + D ++ VY AV Sbjct: 61 EKQERLVREVKGPARRVAFDEEGKPTKAALGFARSQGVK-VEDLVVRLVGDTEYVY-AVK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +VL+ + P I + +P+SMRW S+IRP++ +L + E Sbjct: 119 EEEGRPTPEVLRELCPRLITSLSFPRSMRWGDKK-----ISFIRPIRWLLALY-----GE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I +L + GN+T GHRF + P+ V S + Y + + E V++DPE R+ IL+ Sbjct: 169 EVIPFELDGLKAGNVTRGHRFLSSAPVTVPSPEAYFQLMAENFVVVDPEERKKLILSQLE 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA+ G ++ D +LLEE+ LVE+ F GSF ++L LPE ++ T+K +Q+ F R Sbjct: 229 ELAAREGGKVEADPELLEEVANLVEYATAFCGSFSPEFLRLPEAVLVTTMKEHQRYFPLR 288 Query: 294 TREGVLANCFILV-SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L F+ V S+ A G I +GN RV+ ARL DA F++ D Sbjct: 289 DKEGKLLPRFLAVHSSSPAHTEG--IRKGNERVLKARLADASFFYRED------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR----VLGKKIAQLIDADV 408 L++PL R+ L VV+ +GT ++ R++ LG ++ + DA Sbjct: 335 --------LARPLADRVEGLKR--VVYLEDLGTLYDKTLRLQELVAYLGNELG-VDDATR 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++ RA L+KADL T +V EFPELQG +G+EYA+ E+ + +A+ E PR + + Sbjct: 384 KILARAAYLAKADLLTHMVYEFPELQGVMGREYALASGEDPAVAEALYEQYLPRFAGDAL 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------------ 516 P + LADK+D L+ + + P+GS+DPYALRR LGII II Sbjct: 444 PQTMPGRILGLADKVDNLVGCFGLGLIPTGSQDPYALRRQALGIIHIITSASLSLSLSRL 503 Query: 517 -------LENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ + L + + +L FF RL+ L IR ++IEA+L D+L Sbjct: 504 WEKAYQAYRGRLRLGLEEVL--GSLRDFFAQRLRA-LWGEKIRAEVIEAVLAVGFDDLNR 560 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA---IEEKKNREISLEISPQYLLLEAEKR 626 + L F + R IL EEK + P + AE+ Sbjct: 561 AFLKTQALAAFCQDPAFPLLHTAYLRAVNILKGNLPEEKPD--------PSLFVHPAEQE 612 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY + + + Y + L + +P+ FFD VLV ++ +R NRL+LL Sbjct: 613 LYDTLVGLEEEVAPDLKRGDYFAVLQKLTRLHDPVARFFDGVLVMDENPALRANRLALLA 672 Query: 687 YIKNIILIVINVQKI 701 +I ++ V ++ I Sbjct: 673 WIVRLVREVGDISCI 687 >gi|331655194|ref|ZP_08356193.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M718] gi|331047209|gb|EGI19287.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M718] Length = 689 Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSDEALSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|157150548|ref|YP_001449885.1| glycyl-tRNA synthetase subunit beta [Streptococcus gordonii str. Challis substr. CH1] gi|229558577|sp|A8AVS5|SYGB_STRGC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157075342|gb|ABV10025.1| glycyl-tRNA synthetase, beta subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 679 Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 218/715 (30%), Positives = 362/715 (50%), Gaps = 90/715 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I++ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQFVIASPLERGDMIVDQIQA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 SEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNL-DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD-VAL 410 K + DL + L+ +V FH KIG+ E + R + +AQ +DAD A Sbjct: 335 -KLAIADLVEKLN---------NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q + Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 530 ------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++Q +L FF R++ + DR I D++ A+L+ + + DL++ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRSIPKDIVTAVLQSTH---FVVRDLVET 560 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI----- 631 A+ + F + + + ++ + EK + + ++P + EK L A I Sbjct: 561 AALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENKEEKDLAAAIEKVVL 618 Query: 632 -SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD ++ D ++ I+ FFD +V +D VR+NRL+LL Sbjct: 619 TSDLAANL-------------DQFFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|227529169|ref|ZP_03959218.1| glycine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] gi|227350894|gb|EEJ41185.1| glycine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] Length = 691 Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 368/734 (50%), Gaps = 84/734 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + LKE+ + + ++++ TP RL L + GLS Sbjct: 5 YLLEVGVEEMPAHVVTPSIKQLHERVANYLKEQRISFDEIQEFATPRRLALLIHGLSDKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G ++ D + K+ KG Y+ V + Sbjct: 65 PDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQG-ASVDDIEFKE--VKGVEYVFVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +VL+ + P I + +P M+W + +IRP++ ++ +L +++ Sbjct: 122 SGKPVAEVLQGL-PDVITSMNFPTLMKWGYNN-----LQFIRPIRWLVSLL-----NDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ G IT GHRF H ++++ Y + L + V+ D R+ I ++ Sbjct: 171 VPFKILDVEAGRITRGHRFLG-HEVELKQATDYEKSLHDDFVIGDQTKRKQLIEKQIDKI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 SA + D DLLEE+ LVEW F GSFDKKYL LP ++ ++K NQ+ F R Sbjct: 230 VSANDWVIDTDPDLLEEVNNLVEWPTAFAGSFDKKYLVLPNAVLITSMKDNQRFFYLRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L+ FI V N +D +++GN RV+ RLEDA F++ DQ Sbjct: 290 EGNLSPNFIAVRN-GNTDYLENVIKGNERVLVPRLEDAKFFYEEDQ-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR----VLGKKIAQLIDADVALV 411 +D+ + RL V FH KI + +++ R+ VLGK++ D ++A + Sbjct: 335 ------KISIDEYVERLKR--VSFHDKISSMYDKMQRVAIIAAVLGKRL-NFSDEELADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T++V EF ELQG +G+ YA L E + AI EH P ++P + Sbjct: 386 DRAAHIYKFDLTTQMVGEFAELQGVMGEIYAKLFGEKPAVAQAIREHYMPVSAEGDLPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII ++ +PL Sbjct: 446 KIGAALAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADSNWHLPLLNIQPE 505 Query: 526 -SQFIEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + ++ L + FF DR+ L + ++HD+I+A+ ++ ++ ++ Sbjct: 506 IVKAFDEAGLDVDIDISKNAAQVRSFFMDRIHQLLSGQHMKHDVIDAVTDTQSADIENVL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D N + E F + + ++L I +K N + S+++ P +E++LY + Sbjct: 566 DAA---NAIKAHHDDENFKGVVEALTRVLRIAKKGNNDSSVKVDPSLFQNPSEQKLYDAV 622 Query: 632 SDFGTHIQESMDHKRYHQIGD---LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +D +D + D L S+ I +FD+ ++ D V++NRL+ L + Sbjct: 623 NDL-------VDKSSQRTVEDNFAALRSLAPIISEYFDENMIMDKDENVKNNRLTQLGIL 675 Query: 689 KNIILIVINVQKIV 702 ++ N+ K++ Sbjct: 676 ARQTYLIGNLDKLI 689 >gi|251787694|ref|YP_003002415.1| glycyl-tRNA synthetase subunit beta [Dickeya zeae Ech1591] gi|247536315|gb|ACT04936.1| glycyl-tRNA synthetase, beta subunit [Dickeya zeae Ech1591] Length = 694 Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 210/723 (29%), Positives = 336/723 (46%), Gaps = 66/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ YQ++ + P RL L + GLS Sbjct: 6 FLVEIGTEELPPKALRTLAEAFAANFTAELDAAGLGYQSVGWFAAPRRLALKVAGLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 PDREVEKRGPAIAQAFDAEGKATKAAEGWARGCGITVEQAERLTTD--KGEWLLFRAQVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L E ++ Sbjct: 124 GEAAQTLLPGMVSTALAKLPIPKLMRWGDNDT-----QFVRPVHTVTLLLGDELISGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D + GHRF + + D Y + L E VL D E R+ I DA Sbjct: 179 GID-----SARVIRGHRFMGEPEFTIDNADQYPQILLERGKVLADYEARKAKIKADAEDA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT + RI L +A+ I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGTLRNKTDRIAALTGWVAEQIGADVNHAKRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSSAVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTEEAVRL 510 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 ++I F R + + + D I+A+L +K Sbjct: 511 YGDKLSTINAGNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 570 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + E + KR+ ILA K ++ + L E +L ++ Sbjct: 571 AVSHFRTLEQAEALAAANKRVSNILA---KSTETLNDSVQAALLKENEEIQLATYVTALT 627 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + RY + L + E ++ FFD+V+VN D+ +VR NRL+LL ++N+ L V Sbjct: 628 SKLAPWFAEGRYQEALAELAQLRESVDNFFDKVMVNADEAQVRINRLTLLNELRNLFLKV 687 Query: 696 INV 698 ++ Sbjct: 688 ADI 690 >gi|167045601|gb|ABZ10251.1| putative glycyl-tRNA synthetase beta subunit [uncultured marine crenarchaeote HF4000_APKG10I20] Length = 688 Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 224/729 (30%), Positives = 335/729 (45%), Gaps = 72/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LEI SEEIP+ A E + L + TP RL + +KG+ Sbjct: 1 MPELFLEIGSEEIPSGYVQPALEYMREELASFFSRNRIKAGVPEILGTPRRLVVSVKGVD 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +E GP + G KA GF R GL +S +K PK G+V A + Sbjct: 61 ALQEDIVELFHGPNISVAYDDQGKPTKAAIGFARGKGLD-VSQLSREKTPK-GEVVCARV 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K R D L +P+ I +P+ K MRW+ P + RPL I + + Sbjct: 119 EKKGRPTPDHLNEFLPIFIGNIPFAKKMRWADKTRPFA-----RPLHWITALFDGQP--- 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + I CG+++ GHRF P +V+ L Y+ +L+DPE R+ IL Sbjct: 171 --LGFSFDGIACGDLSQGHRFLKPDKFQVKDLASYLEKSANHFLLVDPEVRKQKILEQVQ 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G + ED +LL + LVE+ G FD ++L LP+EL+ +T+K +QK F Sbjct: 229 ILAQEAGGFVEEDPELLNIVNYLVEFPVAIRGDFDPRFLELPKELLVMTMKHHQKYFPVS 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI +SN+ A G I GN RV+ ARLEDA F+ D+ NL ES Sbjct: 289 DGKGNLLPGFITISNMSA---GHEIKNGNERVLRARLEDARFFYNEDKKK--NLDDFVES 343 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 + VVF K+GT E++ RI L + ++ D AL Sbjct: 344 --------------------LKGVVFQKKLGTLYEKMERICDLARILSTHACPDKEPQAL 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L KADL T +V EFPELQG +G YA E + AI+EH +P ++ P Sbjct: 384 --RAGRLCKADLVTLMVYEFPELQGIMGGYYATHSGEEPTVAQAIQEHYRPAFAGDDPPA 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +++ +++ADKLDT++ + PSGS+DPY LRR LGII+I L + L +E Sbjct: 442 SELGAVIAVADKLDTILGCIGVGLIPSGSEDPYGLRRNALGIIQIFLHRGWQVSLDNLVE 501 Query: 531 D-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R K YL +D I+ +L D+++ I Sbjct: 502 EGLRSMGSKIKLDPETIKNHVMELFSQRYKTYLDAEGFPYDAIDCVLSTGLDSIVDIRAK 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + +E E ++ +R+ IL N E E+ L AEK+L+ Sbjct: 562 VSAFSELKKQPYFEPLAIAFRRVVSIL------NDEAEGEVDTGLLNEPAEKKLFEEYLK 615 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + +K + Q + + I ++ FFD+V+V VDD +R NRL LL I + Sbjct: 616 VRGPVFRHIQNKEFSQALEKIVEIKPAVDRFFDEVMVMVDDVSLRKNRLHLLHQISGLFS 675 Query: 694 IVINVQKIV 702 + + +I+ Sbjct: 676 GLADFSRII 684 >gi|146319418|ref|YP_001199130.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis 05ZYH33] gi|146321622|ref|YP_001201333.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis 98HAH33] gi|253752441|ref|YP_003025582.1| glycyl-tRNA synthetase beta chain [Streptococcus suis SC84] gi|253754267|ref|YP_003027408.1| glycyl-tRNA synthetase beta chain [Streptococcus suis P1/7] gi|253756201|ref|YP_003029341.1| glycyl-tRNA synthetase beta chain [Streptococcus suis BM407] gi|229558582|sp|A4W3J4|SYGB_STRS2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229558584|sp|A4VX91|SYGB_STRSY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145690224|gb|ABP90730.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus suis 05ZYH33] gi|145692428|gb|ABP92933.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus suis 98HAH33] gi|251816730|emb|CAZ52372.1| glycyl-tRNA synthetase beta chain [Streptococcus suis SC84] gi|251818665|emb|CAZ56500.1| glycyl-tRNA synthetase beta chain [Streptococcus suis BM407] gi|251820513|emb|CAR47268.1| glycyl-tRNA synthetase beta chain [Streptococcus suis P1/7] gi|292559046|gb|ADE32047.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus suis GZ1] gi|319758845|gb|ADV70787.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis JS14] Length = 678 Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 225/718 (31%), Positives = 361/718 (50%), Gaps = 87/718 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EEIPA + A L + L + + + ++ + TP RL + ++GL+ Sbjct: 4 NLLVELGLEEIPAYIVTPAMHQLRDRMATFLTDNRLAFDSIDVFSTPRRLAVRVRGLADQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T +D + ++ KG+ Y+ V + Sbjct: 64 QTDLTEDFKGPAKKIALDADGNFTKAAEGFVRGKGL-TTADIEFRE--IKGEEYVYVTKH 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +P ++ + +P SM W++ F++IRP+ ++ +L ++ Sbjct: 121 EAGQPAKTVLAGIPEVLKAMTFPVSMNWASNK-----FAYIRPVHTLTVLL-----DDEA 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+D +I G I+ GHRF + ++ S D Y DL V+ DP R+N I+ + Sbjct: 171 LDMDFLDITSGRISRGHRFLG-NETEIASADSYEADLRAQFVITDPAERQNMIVEQIKAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + + D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + Sbjct: 230 EDKHNVTVEIDEDLLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDK 289 Query: 296 EGVLANCFILV--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V N Q D +++GN +V+ ARLED FW+ DQ LK + Sbjct: 290 AGKLLPNFISVRNGNDQYLDN---VIKGNEKVLVARLEDGEFFWREDQK-------LKIA 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID------AD 407 L + RL + V FH KIG+ E + R +V+ +K+A L AD Sbjct: 340 DL-------------VERLKV--VTFHEKIGSLYEHMERTKVIAEKLADLAGLSAGEKAD 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 VA RA + K DL T +V EF ELQG +G++YA+L E + AI EH P Sbjct: 385 VA---RAADIYKFDLLTGMVGEFDELQGIMGEKYALLAGEKPAVAAAIREHYLPNSAEGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P +K+ ++LADK DTL++F+++ PSGS DPYALRRAT GI+RI+ +IPL Q Sbjct: 442 LPESKVGAVLALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWEIPLDQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 I ++Q ++ F R++ + D+ I D+ EA+L +V L Sbjct: 502 LIAELYSLNFASLTYDNQPAVMDFIRARVE-KMMDKTIPKDIREAVLASST----FVVRL 556 Query: 574 -IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + + F AK + + + + ++ + EK E++ I + EK L A ++ Sbjct: 557 QLAASSAIFQKAKEADYKEAVENLSRVFNLAEKA--EVT-AIDEALFENDQEKALAAAVA 613 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 G + E M D L ++ I FFD +V VDD V+ NRL+LL+ + + Sbjct: 614 --GLELTEDMAGNL-----DKLFALSPVIAAFFDNTMVMVDDATVKANRLALLKALAD 664 >gi|294616321|ref|ZP_06696114.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1636] gi|291590835|gb|EFF22551.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1636] Length = 691 Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 220/735 (29%), Positives = 357/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ +I + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 VIPFEILDIKTDRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRKEMIITQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPHFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 329 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 330 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 382 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGD 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 442 LPETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSV 501 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 502 LQETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDL 561 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ EAEK L Sbjct: 562 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKEL 618 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + T + ++ Y Q L S+ IE +FDQ +V ++ VR+NRL+ L Sbjct: 619 HKAVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRENRLTQLNQ 674 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 675 IAAMALSLASLDQII 689 >gi|257465118|ref|ZP_05629489.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor 202] gi|257450778|gb|EEV24821.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor 202] Length = 689 Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 213/720 (29%), Positives = 352/720 (48%), Gaps = 63/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ + G+ +I D + V+ AV+ Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ A+ K+P PK+MRW ++RP+ ++ +L ++ Sbjct: 125 QPTK---NLLVGIISQALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ + G GHRF ++ D Y L+E V+ D R+ IL A Sbjct: 172 LIEGEILGVASGTTVRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D +AI++GN +VV RL DA F Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-SAIIEGNEKVVRPRLTDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F DL + L+ ++ RL V+F ++GT ++ +RI L +IA+ I AD R Sbjct: 334 ---FKTDLKQRLEDQLPRLKT--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I ++P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 449 ASSVALADKFDTLTGIFGIGQQPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 KLFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISSEIDRTLLVEAEEKALAEQVIALQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y D L + E ++ FFD+V+VN ++ ++R NR ++L ++N+ L V ++ Sbjct: 626 APLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEEPKLRQNRQAILNNLRNLFLQVADI 685 >gi|104774141|ref|YP_619121.1| glycyl-tRNA synthetase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423222|emb|CAI98050.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 697 Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 219/731 (29%), Positives = 358/731 (48%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PA + K+ + L LKE G+ ++ ++ Y TP RL + +K L Sbjct: 13 DFLFEIGVEEMPAHVVSKSVKQLVDRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDEK 72 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ S I + KG Y V ++ Sbjct: 73 QADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGM---SADDIYFEELKGVEYAYVHVQ 129 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +++L + V I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 130 KAGKEAKEILLGLDEV-IKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 178 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 179 VVPVEFLDITAGRKTAGHRFLGDSVV-LANADDYVEALRDQYVIVDADERKDMIVSQIND 237 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 238 LVNSHNWQIKLDASLLEEVNKLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 297 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 298 QEGKLINCFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRKY----------- 345 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 P+ + R+D V FH KIG+ E+++R+R++G +A+ L +VA Sbjct: 346 ---------PISHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGYYLAKRFGLSAEEVADF 394 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 395 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYACLAGENENVSVAIKEHYMPTTAEGDLPKT 454 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q + Sbjct: 455 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 514 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 515 IVELLSGKTPAKMPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 574 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL +K + + P +E+ LY Sbjct: 575 AAAKVLQQHHDDEAFKPVVESLTRIANIL---KKAKFSQASPVDPSLFEDRSEQDLY--- 628 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D + DH ++ L + I+ +FD ++ D V++NRLS L + ++ Sbjct: 629 -DGVEALANVKDHAELYEAFVALQGV---IDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 684 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 685 AKRLGDLSKLV 695 >gi|92112142|ref|YP_572070.1| glycine--tRNA ligase [Chromohalobacter salexigens DSM 3043] gi|123265866|sp|Q1R1N7|SYGB_CHRSD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91795232|gb|ABE57371.1| glycyl-tRNA synthetase beta chain [Chromohalobacter salexigens DSM 3043] Length = 688 Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 218/720 (30%), Positives = 350/720 (48%), Gaps = 61/720 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+E+ +EE+P A L + L + V + + Y TP RL + ++GL Sbjct: 6 LLVELGAEELPPSAIEPLALALRDGIAKGLADADVAFASAHAYATPRRLAVRVEGLDDKQ 65 Query: 64 PEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P++ ER GP + A KA +GF RS G+ T+ D I + KG ++ Sbjct: 66 PDRDIERRGPALAAAFKDGQPTKAAEGFARSCGV-TVDDL-IHLETDKGTWLGYRYQESG 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L IV A+Q +P PK+MRW + + S RP+ ++ + A+ ++ Sbjct: 124 EATTALLPAIVERAVQALPVPKNMRWGASRTEFS-----RPVHWLVMLYGADVVPATVLG 178 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L+ G T GHRFHAP I + D Y+ LE A VL D + RR I A Sbjct: 179 LE-----AGRTTRGHRFHAPDAIDLAHADDYLDALENAYVLADMQRRRERIREQVLAEAE 233 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V D+DLL+E+ GLVEW GSFD+++L +P E + ++K NQK F +G Sbjct: 234 VNEATAVIDEDLLDEVSGLVEWPVALTGSFDERFLDVPAECLISSMKANQKYFHLLDAQG 293 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D +++GN +V+ RL DA F+ D+ +L+S + SAL+ Sbjct: 294 TLKPLFITVSNIESRDP-QQVIEGNEKVIRPRLADAAFFYDTDRKQ--SLAS-RRSALE- 348 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 VVF +GT ++ RI + IA I D RA L Sbjct: 349 ------------------SVVFQQSLGTLADKAQRIEAISSFIASRIGGDADHASRAAQL 390 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL TE+V EFPELQG +G YA E A+ E PR ++VP + + Sbjct: 391 AKCDLVTEMVLEFPELQGIMGTYYARQDGEPEEVAQALHEQYLPRFASDDVPATPAGLAL 450 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI---------------- 521 +LAD+LDTL + I ++PSG+KDP+ALRRA +G++ I+++ ++ Sbjct: 451 ALADRLDTLTGIFGIGQRPSGTKDPFALRRAAIGVLNILVKAELDLDLRELLELAAAQHG 510 Query: 522 DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 D+P ++ + D +++ + DR + + D I ++ A+ L I+ ++ F Sbjct: 511 DLPKAEGLVD-DVLDYMLDRFRAWTQDEGIAVEVYLAVRARPVTRPLDFARRIRAVHAFS 569 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ IL+ K+ + S + L EAE L + ++ Sbjct: 570 QREEAVALAAANKRVSNILS---KQQHDGSTSVDTGLLQAEAETTLSTALEQCHQSVRPL 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D RY + D+L + P++ FF+ V+V +D VR NRL+LL ++++ L V ++ ++ Sbjct: 627 LDAARYAEALDVLAQLRGPVDAFFEDVMVMAEDEAVRRNRLALLASLQSLFLEVADIAQL 686 >gi|327459311|gb|EGF05657.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1] gi|327472736|gb|EGF18163.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK408] Length = 679 Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 218/718 (30%), Positives = 360/718 (50%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EVGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQFVIASTLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHDVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRH 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FFH R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYDNQEAVLDFFHARVE-KMMDRSIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + + I+P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--INPALFENQEEKDLAAAIES 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD ++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLAANL-------------DQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|167854811|ref|ZP_02477589.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis 29755] gi|167854109|gb|EDS25345.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis 29755] Length = 689 Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 212/720 (29%), Positives = 351/720 (48%), Gaps = 63/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATS 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ + G+ +I D + ++ AV+ Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATDKGEWLIHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ A+ K+P PK+MRW ++RP+ ++ +L ++ Sbjct: 125 QPTK---NLLVGIISQALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ + G GHRF ++ D Y L+E V+ D R+ IL A Sbjct: 172 LIEGEILGVASGTTVRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D + I++GN +VV RL DA F Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F DL + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD R Sbjct: 334 ---FKTDLKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 449 ASSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 KLFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISSEIDRTLLVEAEEKALAEQVITLQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 626 APLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEDPKLRQNRQAILNNLRNLFLQVADI 685 >gi|258405806|ref|YP_003198548.1| glycyl-tRNA synthetase, beta subunit [Desulfohalobium retbaense DSM 5692] gi|257798033|gb|ACV68970.1| glycyl-tRNA synthetase, beta subunit [Desulfohalobium retbaense DSM 5692] Length = 696 Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 222/734 (30%), Positives = 348/734 (47%), Gaps = 73/734 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDF+ EI +EEIPAR + + L + G L +E + + Y TP RL +Y L Sbjct: 1 MPDFVFEIGTEEIPARFLPRLRDQL-VETTGRLLQEQELSAEVTSYATPRRLVVYASQLP 59 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G KA GF +S G++ D + ++G YLAV Sbjct: 60 AKQPVREELVTGPPVAIAYDDNGEPTKAAQGFAKSQGVEV--DALFSEQTERG-AYLAVR 116 Query: 114 RK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++L + + + +PKSMRW + + ++ RP++ +L +L +E Sbjct: 117 KTVGGNDARELLPQLCQELLAALSFPKSMRWEASQA-----TFARPVRWLLALLDSE--- 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 I+ ++ + G T+GHR P +V Y L ++ V+LD R I + Sbjct: 169 --IVPVEAVSLTAGRQTFGHRTMGAGPWEVPEAASYFEILRDKGRVILDVAERTRRIREE 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A ASA G + D+ LL E+ LVEW Q +G FD +L LP ++ +++++QK F Sbjct: 227 AEAQASAHGGRVAWDESLLGEVADLVEWPQAVLGGFDASFLELPRAVLLTSMQSHQKSFG 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L F+ N+ D + +G RV+ ARLEDA FW+ D Sbjct: 287 VENDAGELLPYFVCTLNLVPQDLDL-VRKGWERVLRARLEDARFFWQVDGKA-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-L 410 L+ LDQ LD V+F +G+ G++ R+ L ++A + + A Sbjct: 338 --------SLTTWLDQ----LD--KVIFLGPLGSMGDKARRLEGLAGEMAARVAPEAADS 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+K DL +E+V EF ELQG +G Y+ + E S A+ EH P GP VP+ Sbjct: 384 AQRAGRLAKTDLVSEMVGEFAELQGFMGGVYSRQKGETASVAQAVAEHYLPTGPESAVPS 443 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----- 525 N V+LADK DTL+ + ++ PSG+ DPYALRR LGIIRI+LE + L Sbjct: 444 NAEGAVVALADKADTLVGCFGLDMVPSGANDPYALRRQALGIIRILLEYGWRLSLRDLLS 503 Query: 526 ---SQFIED-----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + +D + L FF RLK Y R +++A L D++ + Sbjct: 504 WAQQAYAKDVQWKSEPGVALETLETFFGHRLKAYFQGRGYGTKIVDAALGAGWDDVPALA 563 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY----LLLEAEKRL 627 + L+ F + E+ +L+ KR I+ K+ +I ++ Y L E EK L Sbjct: 564 QRLDALHGFAAEEDFEQAVLTFKRADNII---RKQGTQIDGDLDGGYSATALQEEQEKTL 620 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 A + D + + + + LL + ++ FFD V+V DD E+R NRL+LL+ Sbjct: 621 AAALEDLAPRWAALWEQEAFDDLFGLLRELRPAVDGFFDHVMVMCDDPELRHNRLNLLKA 680 Query: 688 IKNIILIVINVQKI 701 + + + ++ + K+ Sbjct: 681 LTDRLSLLADFSKL 694 >gi|319638992|ref|ZP_07993750.1| glycyl-tRNA synthetase beta subunit [Neisseria mucosa C102] gi|317399896|gb|EFV80559.1| glycyl-tRNA synthetase beta subunit [Neisseria mucosa C102] Length = 687 Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 214/660 (32%), Positives = 342/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D + Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTV 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 INDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 S++ + + I+++ + + GN T GHRF + I +++ D Y + E+ V Sbjct: 163 HSLIVLHGGD-----IVNVSVLGLQSGNKTLGHRFLSSGKIAIENADSYAAQMREQGKVE 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI + A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALNEQAGRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKISAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|313674005|ref|YP_004052116.1| glycyl-tRNA synthetase, beta subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312940761|gb|ADR19953.1| glycyl-tRNA synthetase, beta subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 689 Score = 293 bits (749), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 229/732 (31%), Positives = 366/732 (50%), Gaps = 75/732 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LEI +EEIPA + + L L KE + ++ + TP RLF+ + GL+ Sbjct: 1 MSYYFLEILNEEIPADFVNVGIDYLGSAFENLFKENRIPFEKIVADGTPRRLFVLVSGLA 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQI------KKDPKKGDVYLAVLR 114 H P++ EE +GP A A +G L + + Q+ K KG+ YL+ R Sbjct: 61 DHQPDQEEEIVGPPASAAFDA-EGNLTNVAMNFAKAKQLDVATLKKVSTPKGE-YLSGKR 118 Query: 115 KPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K R +++ V IQ +P+ K+MRW +F + RP+KS + + E Sbjct: 119 FTKGRSTREIISENVAKLIQNIPFKKTMRWGD-----KSFRFARPVKSFISLYDGE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ D+ I N T GHRF IK+ S + Y L+ A V+ + RR I++D Sbjct: 170 -LLPFDIDGIEASNKTAGHRFMWKDSIKIDSPEDYFNRLKNAFVVPERGVRREMIVSDIL 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +++ D+ LL+ + LVE+ +GSF +++L LPEE++ ++K +QK F T+ Sbjct: 229 NIAGQYEVDVDIDESLLDTVTNLVEYPFAVLGSFSEEFLKLPEEVLITSMKNHQKYFYTK 288 Query: 294 TRE-GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R+ G ++N FI +SN + + I +G RV+ ARL+DA F++ D+N Sbjct: 289 NRKNGKISNYFIGISNTKPVNDN--IRKGYERVLRARLKDAAFFFENDKN---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 PL+ R+ L VV+ K+GT E++ R R + + + +++ + Sbjct: 337 ----------VPLESRVEELK--KVVYQEKLGTSYEKMERFREVSRYLTEVLSLSSEECK 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L+DR L KADL TE+V EFPELQG +G+EY +Q E I EH P+ + +P Sbjct: 385 LIDRTAYLCKADLMTEMVYEFPELQGVMGREYGRIQGEPQEVYIGIYEHYLPKFSGDKIP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------------- 516 VS+ADK+DT+ ++I P+G+ DPYALRR ++GII+II Sbjct: 445 ETITGAVVSIADKIDTICGCFSIGLIPTGNNDPYALRRNSIGIIQIIRQKSYRIDIDKLV 504 Query: 517 ------LENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L++K++ L + ++DQ ++ F R K L I D ++A + ND L+ I Sbjct: 505 SKSLNLLKSKVNFDLEK-VKDQ-VMEFIKQRYKQVLISEGIASDAVDASIDLFND-LIKI 561 Query: 571 VDLIKHLNEFFSSAKG-EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 L + L S AKG E F A+ +I I +K N S E + + L E E++L Sbjct: 562 EKLARTL----SDAKGKESFNSIAQSYKRINNILKKANHNRS-EYNNEILTEEVERKLLD 616 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I + + Y + + L + I FFD+V+V V+D VR+NRLS+L +K Sbjct: 617 KIDGIKNEFMIRLSKEEYAEGLNTLLQLEPYINEFFDKVMVMVEDTNVRENRLSMLCSLK 676 Query: 690 NIILIVINVQKI 701 + + N+ I Sbjct: 677 QLFDKIGNLSMI 688 >gi|331659874|ref|ZP_08360812.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA206] gi|331053089|gb|EGI25122.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA206] Length = 689 Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|325275347|ref|ZP_08141297.1| glycyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] gi|324099518|gb|EGB97414.1| glycyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] Length = 683 Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 204/711 (28%), Positives = 339/711 (47%), Gaps = 51/711 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ L Sbjct: 5 DFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 P++ GP + A K + + G ++ + + G P + Sbjct: 65 QPDRSINIDGPPLQAAFKDGEPTQAALGFAKKCGVELAEIDQSGPKLRFSQHIPGKATVG 124 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L TIV ++ +P PK MRW+ + ++RP + ++ +L ++++D + Sbjct: 125 LLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----GDQVVDCTILS 174 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + GHRFH P + + + +Y+ DL +A VL D RR I LA Sbjct: 175 QKADRESRGHRFHHPENVLITAPANYVEDLRKAYVLADFAERRELISKRTAELAMQQEGT 234 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + LL+E+ LVEW + SF++++L +P+E + T++ NQK F EG L Sbjct: 235 AIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDSEGKLLPR 294 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 295 FITVANVESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK-------------------- 333 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 +PL+ RL +VVF A++GT ++ R+ L IA LI D RA +LSK DL Sbjct: 334 QPLETFNERLK--NVVFQAQLGTVYDKAERVSKLAAFIAPLIGGDAQRAGRAGLLSKCDL 391 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 TE+V EFPE+QG G YA+ E A+ E PRG +P V++ADK Sbjct: 392 ATEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTLTGAAVAIADK 451 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 452 LDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLTGAVEFAVKQFGAKVKA 511 Query: 531 ---DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + ++ F DRL+ D I ++ + + L ++ + F + E Sbjct: 512 AGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAVQAFRKLPEAE 571 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 KR+ +L+ K I+ ++ P+Y E LY+ I +Q ++Y Sbjct: 572 ALAAVNKRVSNLLS---KAEGAIAEQVEPKYFDNANEFSLYSAIQQADQAVQPMAAARQY 628 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V ++ Sbjct: 629 SESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADI 679 >gi|293378310|ref|ZP_06624479.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium PC4.1] gi|292643174|gb|EFF61315.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium PC4.1] Length = 691 Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 217/734 (29%), Positives = 357/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKESKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 VIPFEILDVKTGRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPHFISARNGDRVKLEN----VVRGNQKVLTARLEDAEFF--------------- 329 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + ++ Sbjct: 330 -----YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 383 MDLQRAAKIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 443 PQSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 502 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 503 QETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLT 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E+ P+ +AEK L+ Sbjct: 563 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAQLEKQSEVDPKLFENDAEKELH 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 620 KAVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQI 675 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 676 AAMALSLASLDQII 689 >gi|119471663|ref|ZP_01614048.1| glycyl-tRNA synthetase subunit beta [Alteromonadales bacterium TW-7] gi|119445442|gb|EAW26729.1| glycyl-tRNA synthetase subunit beta [Alteromonadales bacterium TW-7] Length = 689 Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 217/721 (30%), Positives = 343/721 (47%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L +K L Sbjct: 5 NLLVEIGTEELPPKSLRKLAEAFAANLTQELESLELAHQGVSWYASPRRLGLQVKALEAK 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP A KA G+ R G++ +S+ Q + KG L + + Sbjct: 65 QQDKEVEKRGPATKAAFDSEGNPTKAAMGWARGCGIE-VSEAQTL-ETDKGAWLLHIAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ K+P PK MRW + +IRP+ ++ + +E + Sbjct: 123 AGQETKTLMADAIAKALSKLPIPKPMRWGANKT-----QFIRPVHTVTILFGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 173 LEGEILGKQVSNQLQGHRFHHPEKISINHADEVFDVLKSAYVIADYEQRKAQIRAQIEEA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ASAV + D+DLLEE+ LVEW +F++ +L +P E + T+K +QK F + Sbjct: 233 ASAVNAVVAMDEDLLEEVTSLVEWPVTLTATFEEAFLDVPAEALIYTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F+ VSNI++ D + ++ GN +VV RL DA F Sbjct: 293 NGKLLNKFLFVSNIESKDP-SVVISGNEKVVRPRLADAQFF------------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F D K L+ R+ LD V+F ++GT ++ RI L IA+ + AD L RA Sbjct: 333 -FETDKKKTLESRLESLDT--VLFQKQLGTLKDKSERISELAGYIAEQLGADKDLAKRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EF ++QG +G YA E A E PR +N+PTN IS Sbjct: 390 LLSKTDLMTEMVMEFTDVQGVMGMHYARFDGEAEDVALAQNEQYMPRFAGDNLPTNLISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + + + + Sbjct: 450 AVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKELPLDILDLVAKAQTL 509 Query: 536 L---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F R + + D I D+I+A+L + +K ++ F Sbjct: 510 FGEKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKAVSHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILA---IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + E + KR+ ILA I + N + SL L +AEK L + ++ F T Sbjct: 570 RTLDAAEALAAANKRVSNILAKNDITSQGNVDESL------LSDDAEKVLASQVAKFATE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + Y + L I E ++ FFD V+V DD V+ NRL+LL + + L + + Sbjct: 624 LAPLYADGNYQEALSQLAGIRESVDNFFDNVMVMADDEAVKQNRLALLSQLSGLFLDIAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|303253230|ref|ZP_07339379.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248875|ref|ZP_07530887.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302647912|gb|EFL78119.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854612|gb|EFM86803.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 689 Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 215/722 (29%), Positives = 357/722 (49%), Gaps = 67/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 172 LIEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEFPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D + I++GN +VV RL DA F+K Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFK--------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD R Sbjct: 336 -----ADLKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLSLDLEDLVRKSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 ALFGDKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA--VISDFGT 636 F + E + KR+ ILA K EIS EI + LL+EAE++ A VIS T Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISTEID-RTLLVEAEEKALAEQVIS-LQT 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V Sbjct: 624 ELAPTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|257895443|ref|ZP_05675096.1| glycyl-tRNA synthetase [Enterococcus faecium Com12] gi|257832008|gb|EEV58429.1| glycyl-tRNA synthetase [Enterococcus faecium Com12] Length = 694 Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 217/734 (29%), Positives = 357/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 7 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 67 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 123 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 124 THGKESKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 173 VIPFEILDVKTGRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 232 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 291 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 292 DQGMLLPHFISARNGDRVKLEN----VVRGNQKVLTARLEDAEFF--------------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + ++ Sbjct: 333 -----YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEEL 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 386 MDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGEL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 446 PQSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 505 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 506 QETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLT 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E+ P+ +AEK L+ Sbjct: 566 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAQLEKQSEVDPKLFENDAEKELH 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 623 KAVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQI 678 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 679 AAMALSLASLDQII 692 >gi|157149175|ref|YP_001456493.1| glycyl-tRNA synthetase subunit beta [Citrobacter koseri ATCC BAA-895] gi|166227911|sp|A8ARE4|SYGB_CITK8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157086380|gb|ABV16058.1| hypothetical protein CKO_05015 [Citrobacter koseri ATCC BAA-895] Length = 689 Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 340/718 (47%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGNVEWFAAPRRLALKVANLAASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESAEALLPNMIATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKLI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF I + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEITIDTADQYPQILLERGKVVADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARQIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLKTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K + ++ ++ L E L + ++ Sbjct: 571 RTLEEASALAAANKRVSNILA---KSDEVLNDRVNAATLKEPEEIALALQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + EP++ FF++V+V VDD+++R NRLS+L ++ + L V ++ Sbjct: 628 VFAEGRYQEALVELAELREPVDTFFEKVMVMVDDKDLRINRLSMLAKLRELFLQVADI 685 >gi|145630016|ref|ZP_01785798.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae R3021] gi|144984297|gb|EDJ91720.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae R3021] Length = 688 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 215/721 (29%), Positives = 349/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA + EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP------AEKALAEAVLALRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|257893054|ref|ZP_05672707.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260559557|ref|ZP_05831737.1| glycyl-tRNA synthetase [Enterococcus faecium C68] gi|257829433|gb|EEV56040.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260074225|gb|EEW62547.1| glycyl-tRNA synthetase [Enterococcus faecium C68] Length = 694 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 218/734 (29%), Positives = 357/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 7 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 67 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 123 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 124 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 173 VIPFEILDVKTGRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 232 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 291 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 292 DQGMLLPHFISARNGDRVKLEN----VVRGNQKVLTARLEDAEFF--------------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + ++ Sbjct: 333 -----YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEEL 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 386 MDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGEL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 446 PQSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 505 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 506 QETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLT 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E+ P+ EAEK L+ Sbjct: 566 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKELH 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 623 KAVEAMKKSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQI 678 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 679 AAMALSLASLDQII 692 >gi|251793743|ref|YP_003008473.1| glycyl-tRNA synthetase subunit beta [Aggregatibacter aphrophilus NJ8700] gi|247535140|gb|ACS98386.1| glycyl-tRNA synthetase, beta subunit [Aggregatibacter aphrophilus NJ8700] Length = 688 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 213/721 (29%), Positives = 350/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA DG+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAADGWARGCGITVEQAERIATD--KGEWLVRRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEGLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SVVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSTA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDDGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNR--EISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA E +++L + P AE+ L + Sbjct: 570 FRTLDSAEALAAANKRVANILAKAEGDVGAIDVALCVEP------AEQVLAQSVLSLAKE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L + +P++ FFD V+VN +D ++R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGEYTAVLDKLAGLRQPVDNFFDNVMVNAEDAKLRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|330002313|ref|ZP_08304293.1| glycine--tRNA ligase, beta subunit [Klebsiella sp. MS 92-3] gi|328537334|gb|EGF63585.1| glycine--tRNA ligase, beta subunit [Klebsiella sp. MS 92-3] Length = 689 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVANLAAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMIASSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + IP + GHRF + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA ++ +I + L AE +L + +Q Sbjct: 571 RTLEESSALAAANKRVSNILAKSDETLNDI---VHASVLKEAAEIKLAGNLVVLRDKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V ++ Sbjct: 628 YFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQVADI 685 >gi|324994104|gb|EGC26018.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK678] Length = 679 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 218/715 (30%), Positives = 363/715 (50%), Gaps = 90/715 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDRMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQFVITSPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEAEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 SEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNL-DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL- 410 K + DL + L+ +V FH KIG+ E + R + +AQ +DAD + Sbjct: 335 -KLAIADLVEKLN---------NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETVD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q + Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 530 ------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++Q +L FF R++ + DR I D++ A+L+ + + DL++ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRSIPKDIVIAVLQSTH---FVVRDLVET 560 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI----- 631 A+ + F + + + ++ + EK + + ++P + EK L A I Sbjct: 561 AALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLAAAIEAVEL 618 Query: 632 -SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD ++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 619 TSDLAANL-------------DQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|227551965|ref|ZP_03982014.1| glycine--tRNA ligase [Enterococcus faecium TX1330] gi|227178870|gb|EEI59842.1| glycine--tRNA ligase [Enterococcus faecium TX1330] Length = 691 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 217/734 (29%), Positives = 357/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKESKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 VIPFEILDVKTGRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPHFISARNGDRVKLEN----VVRGNQKVLTARLEDAEFF--------------- 329 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + ++ Sbjct: 330 -----YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 383 MDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 443 PQSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 502 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 503 QETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLT 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E+ P+ +AEK L+ Sbjct: 563 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAQLEKQSEVDPKLFENDAEKELH 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 620 KAVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQI 675 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 676 AAMALSLASLDQII 689 >gi|323179478|gb|EFZ65045.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1180] Length = 689 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 338/718 (47%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPSMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|116626245|ref|YP_828401.1| glycine--tRNA ligase [Candidatus Solibacter usitatus Ellin6076] gi|116229407|gb|ABJ88116.1| Glycine--tRNA ligase [Candidatus Solibacter usitatus Ellin6076] Length = 646 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 229/704 (32%), Positives = 345/704 (49%), Gaps = 70/704 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 LLEI +EEIP M A E+L + L + ++++R TP RL L ++G+ P Sbjct: 5 LLLEIGTEEIPDWMITTALENLRMSFEKL----EITHESVRLDATPRRLVLRVEGV-PAK 59 Query: 64 PEKIEER-LGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + EER LGP A KA++GF R G+ D ++ KG+ Y+ + P R I+D Sbjct: 60 QQDSEERILGPAKSAPPKAVEGFARKQGIAP-EDLTVEST-GKGEYYVYQKKVPGRFIKD 117 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L +P I + +PK+M W+ P +IRP++ I+ +L E+II +L Sbjct: 118 ILAEALPGIILGLYFPKTMYWTGKGGP----RFIRPIRWIVALL-----GEEIIPFELAG 168 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + G +T GHR I + + D+ R L + V+L + RRN I A + Sbjct: 169 VRSGALTSGHRRLGAREIAITTSDYEQR-LRDHGVILSAQERRNQIR------AGIADVR 221 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D LLE ++ L E+ + GSFD ++L LPEE++ ++ +QK F G LA Sbjct: 222 IKSDDALLETLVYLTEFPRPIRGSFDPQFLELPEEVLITVMRHHQKYFSVEDASGKLAPE 281 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F+ V NI SD + +GN RV+ AR DA FW DQ Sbjct: 282 FVAVMNID-SDPEGFVRRGNERVLRARFNDARFFWDADQK-------------------- 320 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R + D+ +V F AK+G+ + R+ L ++ DA+ RA L K DL Sbjct: 321 KPLAAR--KQDLANVTFQAKLGSYLVKTERMMALAAELGG--DANAV---RAAELCKCDL 373 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 TE+V+EF ELQG +G YA +Q E + AI +H KP + +P N ++ VSLADK Sbjct: 374 TTELVKEFTELQGVVGGLYARVQGEPEAVWQAIYDHYKPESMEDALPRNATALIVSLADK 433 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-EDQNLILFFHDR 541 LDTL + + P+GSKDP+ALRRA G++RI++E K+ +PL I D+ L FF +R Sbjct: 434 LDTLRGCFGVGMVPTGSKDPFALRRAAQGVVRILVEGKLPLPLLDLIGRDEALRAFFEER 493 Query: 542 LKLYLHD-RDIRHDLIEAILRPEN--DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 ++ Y D R +D + A + NL+ + ++ + +S E S KRI Sbjct: 494 VRYYFKDIRGFAYDEVNACMAASVGWSNLVDLESRLERVRALRASPDFEPLAASFKRIRN 553 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 IL E+ I L E+ LY ES ++ + Sbjct: 554 IL---EQAKFSGGGAIDEALLEDGPERELYTEFRGIQAQPIES-----------VISRLR 599 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +++FFD+VLVN D VR NRL+LL + + + +IV Sbjct: 600 PRVDLFFDKVLVNAPDPVVRQNRLTLLSTLLAEFSTMADFSEIV 643 >gi|260581758|ref|ZP_05849555.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae NT127] gi|260095351|gb|EEW79242.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae NT127] Length = 688 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 214/721 (29%), Positives = 350/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEMEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L ++ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G +++LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEENLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLLRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKAGAAIGEINLTACVEP------AEKALAEAVLALRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGDYTTVLDKLANLRAPVDNFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|320639879|gb|EFX09473.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. G5101] Length = 689 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 338/718 (47%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + ++ KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAVANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|15833696|ref|NP_312469.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. Sakai] gi|26250200|ref|NP_756240.1| glycyl-tRNA synthetase subunit beta [Escherichia coli CFT073] gi|91213072|ref|YP_543058.1| glycyl-tRNA synthetase subunit beta [Escherichia coli UTI89] gi|110643806|ref|YP_671536.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 536] gi|117625841|ref|YP_859164.1| glycyl-tRNA synthetase subunit beta [Escherichia coli APEC O1] gi|168746896|ref|ZP_02771918.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|168753378|ref|ZP_02778385.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|168759650|ref|ZP_02784657.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|168765973|ref|ZP_02790980.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|168772480|ref|ZP_02797487.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|168779709|ref|ZP_02804716.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|168785430|ref|ZP_02810437.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|168797396|ref|ZP_02822403.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|191170372|ref|ZP_03031925.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli F11] gi|195935089|ref|ZP_03080471.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. EC4024] gi|208808060|ref|ZP_03250397.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208812785|ref|ZP_03254114.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208820866|ref|ZP_03261186.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209399717|ref|YP_002273044.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|215488843|ref|YP_002331274.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O127:H6 str. E2348/69] gi|217326136|ref|ZP_03442220.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|218560634|ref|YP_002393547.1| glycyl-tRNA synthetase subunit beta [Escherichia coli S88] gi|218691848|ref|YP_002400060.1| glycyl-tRNA synthetase subunit beta [Escherichia coli ED1a] gi|227883725|ref|ZP_04001530.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 83972] gi|237703329|ref|ZP_04533810.1| glycyl-tRNA synthetase subunit beta [Escherichia sp. 3_2_53FAA] gi|254795515|ref|YP_003080352.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. TW14359] gi|261224877|ref|ZP_05939158.1| glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261254224|ref|ZP_05946757.1| glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. FRIK966] gi|291284935|ref|YP_003501753.1| Glycyl-tRNA synthetase beta subunit [Escherichia coli O55:H7 str. CB9615] gi|300971418|ref|ZP_07171453.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 45-1] gi|300976958|ref|ZP_07173693.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 200-1] gi|301047087|ref|ZP_07194188.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 185-1] gi|331649389|ref|ZP_08350475.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M605] gi|54039662|sp|P67031|SYGB_ECO57 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|54042277|sp|P67030|SYGB_ECOL6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123265949|sp|Q1R537|SYGB_ECOUT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123343488|sp|Q0TBP4|SYGB_ECOL5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166227912|sp|A1AHA0|SYGB_ECOK1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737051|sp|B7MER4|SYGB_ECO45 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238064849|sp|B5YVL1|SYGB_ECO5E RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781848|sp|B7ULB9|SYGB_ECO27 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781850|sp|B7N1L1|SYGB_ECO81 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|26110629|gb|AAN82814.1|AE016768_232 Glycyl-tRNA synthetase beta chain [Escherichia coli CFT073] gi|13363916|dbj|BAB37865.1| glycine tRNA synthetase beta subunit [Escherichia coli O157:H7 str. Sakai] gi|91074646|gb|ABE09527.1| glycine tRNA synthetase beta subunit [Escherichia coli UTI89] gi|110345398|gb|ABG71635.1| glycyl-tRNA synthetase beta chain [Escherichia coli 536] gi|115514965|gb|ABJ03040.1| glycyl-tRNA synthetase subunit beta [Escherichia coli APEC O1] gi|187771698|gb|EDU35542.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|188018299|gb|EDU56421.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|189002608|gb|EDU71594.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|189359259|gb|EDU77678.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|189364795|gb|EDU83214.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|189369719|gb|EDU88135.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|189374282|gb|EDU92698.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|189380084|gb|EDU98500.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|190909180|gb|EDV68766.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli F11] gi|208727861|gb|EDZ77462.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208734062|gb|EDZ82749.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208740989|gb|EDZ88671.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209161117|gb|ACI38550.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|209755198|gb|ACI75911.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755200|gb|ACI75912.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755202|gb|ACI75913.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755204|gb|ACI75914.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755206|gb|ACI75915.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|215266915|emb|CAS11358.1| glycine tRNA synthetase, beta subunit [Escherichia coli O127:H6 str. E2348/69] gi|217322357|gb|EEC30781.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|218367403|emb|CAR05185.1| glycine tRNA synthetase, beta subunit [Escherichia coli S88] gi|218429412|emb|CAR10231.1| glycine tRNA synthetase, beta subunit [Escherichia coli ED1a] gi|226902593|gb|EEH88852.1| glycyl-tRNA synthetase subunit beta [Escherichia sp. 3_2_53FAA] gi|227839305|gb|EEJ49771.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 83972] gi|254594915|gb|ACT74276.1| glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14359] gi|281180603|dbj|BAI56933.1| glycyl-tRNA synthetase beta subunit [Escherichia coli SE15] gi|290764808|gb|ADD58769.1| Glycyl-tRNA synthetase beta subunit [Escherichia coli O55:H7 str. CB9615] gi|294489492|gb|ADE88248.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli IHE3034] gi|300301004|gb|EFJ57389.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 185-1] gi|300308428|gb|EFJ62948.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 200-1] gi|300411252|gb|EFJ94790.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 45-1] gi|307555663|gb|ADN48438.1| glycine tRNA synthetase beta subunit [Escherichia coli ABU 83972] gi|307628640|gb|ADN72944.1| glycyl-tRNA synthetase subunit beta [Escherichia coli UM146] gi|315285316|gb|EFU44761.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 110-3] gi|315294114|gb|EFU53466.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 153-1] gi|315300121|gb|EFU59359.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 16-3] gi|320191385|gb|EFW66035.1| Glycyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. EC1212] gi|320645042|gb|EFX14066.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H- str. 493-89] gi|320650309|gb|EFX18792.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H- str. H 2687] gi|320655884|gb|EFX23807.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661664|gb|EFX29079.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O55:H7 str. USDA 5905] gi|320666688|gb|EFX33671.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. LSU-61] gi|323189399|gb|EFZ74681.1| glycyl-tRNA synthetase beta subunit [Escherichia coli RN587/1] gi|323949802|gb|EGB45686.1| glycyl-tRNA synthetase beta subunit [Escherichia coli H252] gi|323954897|gb|EGB50677.1| glycyl-tRNA synthetase beta subunit [Escherichia coli H263] gi|324014233|gb|EGB83452.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 60-1] gi|326337437|gb|EGD61272.1| Glycyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. 1044] gi|326339962|gb|EGD63769.1| Glycyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. 1125] gi|330909621|gb|EGH38135.1| glycyl-tRNA synthetase beta chain [Escherichia coli AA86] gi|331041887|gb|EGI14031.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M605] Length = 689 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|317153438|ref|YP_004121486.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio aespoeensis Aspo-2] gi|316943689|gb|ADU62740.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio aespoeensis Aspo-2] Length = 703 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 222/733 (30%), Positives = 365/733 (49%), Gaps = 90/733 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F+LEI +EE+PAR + A +L + LL E + ++ +R Y TP R+ ++ G++ Sbjct: 1 MAEFILEIGTEEMPARFVPRLAAELEQTVARLLGEAMIEHEGVRTYATPRRITAHVAGMA 60 Query: 61 PHSPEKIEERLGPRV-----GAGK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ E GP G G KA GF ++ G++ + +++ D KG+ YLAV Sbjct: 61 DMQRQQEETVTGPPARIAFDGDGNLTKAGQGFAKTQGVEEGALFRLETD--KGE-YLAVR 117 Query: 114 RK--PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R + D+L I +++ + +PK MRW F++ RP++ +L +L Sbjct: 118 KTVGGGRSL-DILPAICVRSVESLSFPKKMRWGGYD-----FAFGRPIRWLLALL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 E +++ ++ + G T GHR P P V S D Y +E E V++DPE R+ AI++ Sbjct: 167 DEAVVEFSVENLTAGRTTRGHRVLGPGPFAVASADRYFSVVEKECRVVIDPETRKQAIVD 226 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +RLA+A+G E+V + LL+E+ LVE+ + +G D +YL LP E++ +++++QK F Sbjct: 227 GGNRLAAALGGEIVWHEGLLDEVANLVEYPRPLIGDIDPRYLELPREVLLTSMQSHQKSF 286 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + +G L F+ NI+ D A + +G RV+ ARLEDA FW+ D Sbjct: 287 GVQGPDGRLLPHFLTTLNIEPVDI-ALVKKGWERVLKARLEDARFFWEAD---------- 335 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + F L K + +VVF +G+ G++ RI L +A+ + + Sbjct: 336 --CKVDFQTWLGK----------LENVVFLGPLGSVGDKSRRIGTLCAALAETLAGSKGI 383 Query: 411 VD-------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + +A LSKADL +++V EF LQGK+G YA + I E P G Sbjct: 384 LPGEFEAYAQAGRLSKADLVSDMVIEFDTLQGKMGGIYAERAGKGDIVSRGIYEQYLPAG 443 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 P VP++ VS+ADK DTL + + + P+G+ DPYALRR LGIIRII+E+ +D+ Sbjct: 444 PDSPVPSSLSGAFVSMADKADTLAGCFGLGKAPTGANDPYALRRCALGIIRIIMEHDLDM 503 Query: 524 PLSQFIEDQN-------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 L F+ L+ FF RL+ + I +++A L Sbjct: 504 DLETFLTTAQEAYAKDIPWKVAREESLAKLLDFFGQRLRALFTGQGIETRVVDAALGAGF 563 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY--LLLE 622 ++ T+ + L+ F E+ +L+ KR I+ K+ E E++ Y L E Sbjct: 564 SDIRTLKARLDALDAFSREPDFEQAVLTFKRAANII---RKQGDEAGQELTGGYDPDLFE 620 Query: 623 AEKRLYAVISDFGTHIQESM-------DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 E + FGT ++E+ ++ + + LL + ++ FFD V+V DD Sbjct: 621 GEHE-----TAFGTRLEENAPRFDALWENGDFAGLLGLLRELRPSVDGFFDNVMVMCDDA 675 Query: 676 EVRDNRLSLLQYI 688 VR NRL+LL+ + Sbjct: 676 AVRLNRLNLLKAL 688 >gi|52426011|ref|YP_089148.1| glycyl-tRNA synthetase subunit beta [Mannheimia succiniciproducens MBEL55E] gi|81825482|sp|Q65R47|SYGB_MANSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|52308063|gb|AAU38563.1| GlyS protein [Mannheimia succiniciproducens MBEL55E] Length = 689 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 216/720 (30%), Positives = 354/720 (49%), Gaps = 63/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ ++ + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLTFEKVQWFAAPRRLAVKVLNLATS 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ A + Sbjct: 65 QPTKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERLATDKGEWLVHRATIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + +++ IV ++ +P PK MRW ++RP+ ++ +L E Sbjct: 125 QPTK---NLMLDIVTRSLANLPIPKMMRWGDKTE-----QFVRPVHTVSLLLGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ I G GHRF ++ D Y + L++ V+ D RR IL D+ Sbjct: 172 LIEGEILGIASGRTIRGHRFLGEAEFQIAHADEYPQILKDKGSVIADFNERRAIILADSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ASA+G + DLL+E+ LVE+ V +F++++L +P E + T+K +QK F Sbjct: 232 AKASALGGVADIEDDLLDEVTSLVEFPNVLTATFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI VSNI +D I++GN +VV RL DA F Sbjct: 292 DKNGKLLPHFIFVSNINPTDP-TPIIEGNEKVVRPRLSDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D + L+ + RL+ V+F ++GT ++ RI+ L +IA I AD A +R Sbjct: 334 ---FNTDKKQRLEDLLPRLET--VLFQQQLGTLLDKTKRIQALAGEIATQIGADKAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L++ ++ Sbjct: 449 ASSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLAEIVKKST 508 Query: 531 --------DQN----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +QN ++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 ALFADRLTNQNVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K EIS +I LL EK L + + + Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KIEGEISSKIDRTLLLEPEEKALAEQVLALQSEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y D L + E I+ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 626 APLFAKGEYQPALDRLAGLREVIDNFFDKVMVNAEDEKLRQNRQAILNTLRNLFLQVADI 685 >gi|325686028|gb|EGD28086.1| glycyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 688 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 218/731 (29%), Positives = 358/731 (48%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 4 DFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVMVKELDEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ S I + KG Y V ++ Sbjct: 64 QADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGM---SADDIYFEELKGVEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +++L + V I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 121 KAGKEAKEILLGLDEV-IKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLGDSVV-LANADDYVEALRDQYVIVDADERKDMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVNSHNWQIKLDTSLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L N FI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINYFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + R+D V FH KIG+ E+++R+R++G +A+ L +VA Sbjct: 336 --------YPLSHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYARLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q + Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL +K + + P +E+ LY + Sbjct: 566 AAAKVLQQHHDDKAFKPVVESLTRIANIL---KKAKFSQASSVDPSLFEDRSEQDLYNGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + DH ++ L + I+ +FD ++ D V++NRLS L + ++ Sbjct: 623 E----ALANVKDHAELYEAFVALQGV---IDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|257882783|ref|ZP_05662436.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257818441|gb|EEV45769.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,502] Length = 694 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 217/734 (29%), Positives = 358/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 7 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 67 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 123 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 124 THGKESKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 173 VIPFEILDVKTGRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G +++KYL +PEE++ ++K +Q+ F R Sbjct: 232 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDYEEKYLSVPEEVLVTSMKEHQRYFEVRN 291 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 292 DQGMLLPHFISARNGDRVKLEN----VVRGNQKVLTARLEDAEFF--------------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V +H KIG+ E++ R++V+ + I + L + ++ Sbjct: 333 -----YNEDKKASIDQYVEKLKT--VTYHEKIGSIYEKMQRVQVIARIIGEQVGLSEEEL 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++ Sbjct: 386 MDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 446 PETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 505 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 506 QETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLT 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E+ P+ EAEK L+ Sbjct: 566 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKELH 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 623 KAVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQI 678 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 679 AAMALSLASLDQII 692 >gi|23008660|ref|ZP_00050015.1| COG0751: Glycyl-tRNA synthetase, beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 306 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 155/313 (49%), Positives = 203/313 (64%), Gaps = 33/313 (10%) Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 +SN+ ASDGGAAI GN RVV ARL DA FW+ D+ + L Sbjct: 1 MSNLVASDGGAAITAGNERVVRARLSDAKFFWETDK--------------------ATKL 40 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 + R+ +LD +VFH K+GTQGERV+RI L K+IA L+ AD L +RA L+KADL TE Sbjct: 41 EDRLPKLD--SIVFHEKLGTQGERVARIAGLAKEIAPLVGADPVLAERAARLAKADLVTE 98 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+LADKLDT Sbjct: 99 MVGEFPELQGLMGRKYAALQGEHPSVAAAIEEHYKPVGPSDRVPTDPVSIAVALADKLDT 158 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----------NLI 535 L+ FWAI+EKP+GSKDP+ALRRA LG+IR ++E + + L+ +E + +L+ Sbjct: 159 LVGFWAIDEKPTGSKDPFALRRAALGVIRAVIERSLRLSLASLVEGRFTGTSAERTADLL 218 Query: 536 LFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L EF S G+ L K Sbjct: 219 AFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLLVVRRVEALGEFLGSDDGKNLLAGYK 278 Query: 595 RIFQILAIEEKKN 607 R IL IEEKK+ Sbjct: 279 RAANILRIEEKKD 291 >gi|222109760|ref|YP_002552024.1| glycyl-tRNA synthetase subunit beta [Acidovorax ebreus TPSY] gi|254781847|sp|B9MCM4|SYGB_DIAST RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|221729204|gb|ACM32024.1| glycyl-tRNA synthetase, beta subunit [Acidovorax ebreus TPSY] Length = 720 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 230/741 (31%), Positives = 359/741 (48%), Gaps = 99/741 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L+ L+ +G+ + + + +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAGVLLEQLQAQGLTSAHSQLTAFASPRRLAAHITEVL 64 Query: 61 PHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKK--DPKKGDVYLA 111 P + +K + ++L P G A+ L + G S Q+K+ D K ++ Sbjct: 65 PAAADKAVSQKLMPVAVGLDASGQPTPALLKKLAALGADAASVPQLKRVHDGKAEVLFFE 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPISAFSWIRPLKSILCI 165 + K L+ D L+ + AI K+P PK MR W++ H ++RP Sbjct: 125 SMAK-GALLADGLQKALDEAIAKLPIPKVMRYQLQDGWTSVH-------FVRPAHG---- 172 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPEC 223 LVA E ++ + + GN T+GHRF A P+ +QS D Y L E V+ Sbjct: 173 LVALHGSEVLVGVQALGLTAGNTTHGHRFEASVDPVVIQSADSYAEQLRSEGAVIASFAE 232 Query: 224 RRNAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRL 281 RR I A VG + ++D LL+E+ LVE V + F+K +L +P+E + L Sbjct: 233 RRAEIARQLQAAADRVGGGVRPIDDDALLDEVTALVERPNVLVCEFEKDFLAVPQECLIL 292 Query: 282 TIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 T+K NQK F EG L + F++VSNI D +A++QGN RVV RL DA F+ +D+ Sbjct: 293 TMKANQKYFPLLDAEGKLTHQFLVVSNISPQDA-SAVIQGNERVVRPRLADAKFFFDQDR 351 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKI 400 K L ++R+D L VV+H K+GTQGERV R+R + K I Sbjct: 352 K--------------------KTL---VSRVDQLAKVVYHNKLGTQGERVERVRHIAKAI 388 Query: 401 AQ-----LIDADVAL---------------VDRAIVLSKADLCTEIVREFPELQGKIGKE 440 A L + AL VD A +L+K DL T++V EFPELQG +G Sbjct: 389 ATQLFTALAQGNAALDSQEGEIAQDYLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGY 448 Query: 441 YAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSK 500 YAV AIE+H KPR + +P + + V+LADKL+TL+ + I P+G + Sbjct: 449 YAVSDGLPDEVAHAIEDHYKPRFAGDALPRENVGVVVALADKLETLVGMFGIGNLPTGDR 508 Query: 501 DPYALRRATLGIIRIILENKID----------IP-LSQFIEDQNLIL--FFHDRLKLYLH 547 DP+ALRR LG+IR+++E ++ +P IED + L F +DRL L Sbjct: 509 DPFALRRHALGVIRMLVEKELPLDLDALLASAVPAFGDKIEDTSAQLADFIYDRLAGSLR 568 Query: 548 DRDIRHDLIEAI--LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 ++ ++A+ LRP+ L + I+ + F + + + KR+ IL K Sbjct: 569 EQGYSAQEVDAVIALRPQ--RLALVPRQIEAVRAFATLEQAPALAAANKRVTNIL----K 622 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 K E+ ++ + L AEK LYA + F D Y L + P++ FF Sbjct: 623 KAGEVDPHVNEELLQEPAEKDLYAALQRFVPEANAQFDSGDYTASLQTLAVLRAPVDAFF 682 Query: 666 DQVLVNVDDREVRDNRLSLLQ 686 D V+VN ++ +R NR LL+ Sbjct: 683 DDVMVNAEELALRLNRQGLLK 703 >gi|170682940|ref|YP_001745846.1| glycyl-tRNA synthetase subunit beta [Escherichia coli SMS-3-5] gi|218702324|ref|YP_002409953.1| glycyl-tRNA synthetase subunit beta [Escherichia coli IAI39] gi|226737052|sp|B7NP55|SYGB_ECO7I RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737055|sp|B1LJC0|SYGB_ECOSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170520658|gb|ACB18836.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli SMS-3-5] gi|218372310|emb|CAR20175.1| glycine tRNA synthetase, beta subunit [Escherichia coli IAI39] Length = 689 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|254696832|ref|ZP_05158660.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260761226|ref|ZP_05873569.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260671658|gb|EEX58479.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] Length = 290 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 145/290 (50%), Positives = 188/290 (64%), Gaps = 1/290 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E + I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERCKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKC Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKC 290 >gi|293559431|ref|ZP_06675970.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1162] gi|314948954|ref|ZP_07852320.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0082] gi|291606645|gb|EFF36040.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1162] gi|313644613|gb|EFS09193.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0082] Length = 691 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 218/734 (29%), Positives = 357/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 VIPFEILDVKTGRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPHFISARNGDRVKLEN----VVRGNQKVLTARLEDAEFF--------------- 329 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + ++ Sbjct: 330 -----YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 383 MDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 443 PQSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 502 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 503 QETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLT 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E+ P+ EAEK L+ Sbjct: 563 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKELH 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 620 KAVEAMKKSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQI 675 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 676 AAMALSLASLDQII 689 >gi|300957594|ref|ZP_07169796.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 175-1] gi|300315662|gb|EFJ65446.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 175-1] Length = 689 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLENNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|301020273|ref|ZP_07184391.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 69-1] gi|300398850|gb|EFJ82388.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 69-1] Length = 689 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLSHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPAVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|294623001|ref|ZP_06701890.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium U0317] gi|291597557|gb|EFF28719.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium U0317] Length = 691 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 220/735 (29%), Positives = 356/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 IIPFEILDVKTDRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRKEMIITQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPHFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 329 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 330 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 382 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGD 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 442 LPETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSV 501 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 502 LQETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDL 561 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ EAEK L Sbjct: 562 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKEL 618 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L Sbjct: 619 HKAVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQ 674 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 675 IAAMALSLASLDQII 689 >gi|242279452|ref|YP_002991581.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio salexigens DSM 2638] gi|242122346|gb|ACS80042.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio salexigens DSM 2638] Length = 697 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 212/720 (29%), Positives = 360/720 (50%), Gaps = 70/720 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DF+LEI EE+PAR + D+ I LL+E+ + ++ Y TP RL +++K ++ Sbjct: 1 MADFILEIGIEEMPARFVPRLGLDIKDIFSSLLEEKMIDNASVETYATPRRLTVFVKDMA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE GP G KA+ GF++S G+ ++ D KGD A Sbjct: 61 AVQRKVEEEVSGPPARIAYDADGNPTKALTGFVKSQGIALEDVYTLETD--KGDYLAAKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L I AI+K+ +PK M+W F++ RPL+ +LC+ + Sbjct: 119 TVGGGETIDILPEICVTAIKKLSFPKKMKWGNLD-----FAFGRPLRWLLCLFGTD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 +++ ++ +P G TYGHR P +V S D Y ++E + V++ PE R + + Sbjct: 170 -VVEFEMAGMPSGRQTYGHRVMGAGPWEVASADDYFDVIKEKSSVIISPEARGEHVRKEG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +LAS + +V LLEE+ LVE +G+FD+ +L LP+E++ +++++QKCF Sbjct: 229 DKLASELKGSVVWKDSLLEEVSNLVELPVPIIGNFDESFLELPKEVLLTSMESHQKCFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + +G L F+ N+ +D + +G +V+ ARLED FWK D Sbjct: 289 QKEDGELLPHFLCTLNLVPTDV-ELVRKGWEKVLRARLEDGRFFWKND------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 L D + +LD +VVF +G+ G++ R+ L IA DA + + Sbjct: 336 --------LKTDFDTWLDKLD--NVVFLGPLGSMGDKSRRMERLAALIAGKTDASLQTEM 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+KADL +E+V EF +LQGK+G YA E+ C A+ E P GP VP+ Sbjct: 386 ARAGRLAKADLVSEMVNEFDKLQGKMGGIYASKCGEDDVVCKALYEQYLPAGPESPVPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI--------DI 523 + VS++DK DTL+ + +N+ P+G+ D YALRRA LGI+R+I++ + D+ Sbjct: 446 LGGVIVSMSDKADTLVGCFGLNKIPTGANDTYALRRAALGIVRMIIQYDLRVDILEIMDM 505 Query: 524 PLSQFIED-----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + +D + L F +RL+ Y + +++A L ++ + Sbjct: 506 AFEGYSKDIKWKLEKSELLEKLGEFISNRLRAYFTGKGYETRVVDAALGAGYRDVTALKA 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY---LLLEA-EKRLY 628 ++ L EF + E+ +L+ KR I+ +K+ E + ++ + L EA EK L Sbjct: 566 RVEALAEFAKADGFEQAVLTFKRAANII---KKQGSEQGVSLTGGFEVDKLEEAQEKELA 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + +E ++ + ++ +L + ++ FFD V+V +D+ +R NRL+LL+ + Sbjct: 623 TKLDETAARFEELWENDEFSKLFAILGELRPYVDDFFDNVMVICEDKGLRMNRLNLLKAL 682 >gi|300937166|ref|ZP_07152019.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 21-1] gi|300457752|gb|EFK21245.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 21-1] Length = 689 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGRVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|294618701|ref|ZP_06698234.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1679] gi|291595044|gb|EFF26388.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1679] Length = 691 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 220/735 (29%), Positives = 356/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 IIPFEILDVKTDRASRGHRFLG-EDVTFTHAKEYEEKLNEQFVIASPQKRKEMIITQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPHFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 329 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 330 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 382 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGD 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 442 LPETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSV 501 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 502 LQETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDL 561 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ EAEK L Sbjct: 562 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKEL 618 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L Sbjct: 619 HKAVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQ 674 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 675 IAAMALSLASLDQII 689 >gi|95929742|ref|ZP_01312483.1| Glycine--tRNA ligase [Desulfuromonas acetoxidans DSM 684] gi|95134038|gb|EAT15696.1| Glycine--tRNA ligase [Desulfuromonas acetoxidans DSM 684] Length = 688 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 207/725 (28%), Positives = 346/725 (47%), Gaps = 66/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LEI +EEIPA M A DL ++ L V + ++ Y TP RL L + ++ Sbjct: 4 ELFLEIGTEEIPAGMLPVAMRDLERMMRKELTNARVAFGDVTTYATPRRLVLSVADVAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + GP V G KA GF RS G+ +S+ ++ K ++L+ + + Sbjct: 64 QERQELNLSGPSVKVAFDADGNPTKAALGFARSNGVD-VSELTQQETEKGTYLFLSKVIE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + I++ L I+ + + + KSMRW + RP+ ++ + E + Sbjct: 123 GQP-IKEQLPEIMERIVSSLSFKKSMRWKDLD-----VRFARPVHWLIALFGGE-----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + GN +YGHRF AP V LD ++ E V++DPE R+ I + R+ Sbjct: 172 IPFSWGNLTSGNTSYGHRFMAPAGFDVTGLDDFVAKAREHFVIVDPEERKQIIAREIERV 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G L D+DLLEE+ LVE GSF++++L LP+EL+ ++K +Q+ F Sbjct: 232 AGEEGGALNVDEDLLEEVAYLVEDPTPLCGSFEEEFLQLPDELLITSMKEHQRYFTLADT 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI +SN + +D +V+GN RV+ ARL DA+ FWK DQ Sbjct: 292 EGRLLPKFITISNTRPTDPDV-VVKGNERVLRARLSDAMFFWKEDQKT------------ 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDRA 414 PL+ R+ L +VV+ A++GT +V R L + +A D++V L RA Sbjct: 339 --------PLENRLEALK--NVVYQAQLGTSYAKVQRFTALAEDLASQFDSEVVELTRRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L K DL T +V EFPELQG +G+EYA ++ E+ AI EH P ++P++ + Sbjct: 389 AQLCKCDLETGMVYEFPELQGVMGREYAAIEGEDPRVAKAIFEHYLPVQAGGDLPSDNVG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----- 529 VS+ADK+DT+ + + P+G+ DPYALRR +G++ I+L+ + + + + Sbjct: 449 AFVSIADKIDTICGCFGVGLIPTGTADPYALRRCAIGVLNILLDRGFTVSIPELVAKAVK 508 Query: 530 --EDQ----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ED+ +++ F R + + D++EA+L DN++ I+ L Sbjct: 509 QLEDKLNRSVEEVTADVVEFIRLRFVNMMTGPETATDVVEAVLAARFDNVMDARQRIEAL 568 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + + E + KR+ I+ ++ + + + E+ +Y + Sbjct: 569 SAMKQQPEFEALAATFKRVGNII------KGGVTDAVDAECFEQDCEREMYGALQQVQQD 622 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + M Y + S+ ++ FFD V+V +D V+ NRL+LL + + + + Sbjct: 623 VARLMADGDYPGALRAIGSLRPAVDAFFDGVMVMAEDEAVKRNRLALLTQVAGLFAGLAD 682 Query: 698 VQKIV 702 +I Sbjct: 683 FSRIA 687 >gi|301328324|ref|ZP_07221428.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 78-1] gi|300845219|gb|EFK72979.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 78-1] Length = 689 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGGIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|309379539|emb|CBX21905.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 687 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 211/660 (31%), Positives = 337/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + E+ V Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNKTLGHRFLSNGEITIENADSYAEQMREQGKVE 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLNQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVVAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E+ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVDESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|222035273|emb|CAP78018.1| glycyl-tRNA synthetase beta chain [Escherichia coli LF82] gi|312948124|gb|ADR28951.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O83:H1 str. NRG 857C] Length = 689 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|145634100|ref|ZP_01789811.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittAA] gi|145268544|gb|EDK08537.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittAA] Length = 688 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 214/721 (29%), Positives = 350/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNGIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KAAALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAMPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++N++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFSDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA + EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP------AEKALAEAVLVLRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGDYTAVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|325577405|ref|ZP_08147812.1| glycyl-tRNA synthetase beta subunit [Haemophilus parainfluenzae ATCC 33392] gi|325160634|gb|EGC72757.1| glycyl-tRNA synthetase beta subunit [Haemophilus parainfluenzae ATCC 33392] Length = 688 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 214/721 (29%), Positives = 351/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVDQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R++RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLSRLET--VLFQQQLGTLKDKTDRIEKLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++N++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFADKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA + EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP------AEKALAEAVLALRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAKGDYTAVLDKLANLRAPVDNFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|289566740|ref|ZP_06447154.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecium D344SRF] gi|289161461|gb|EFD09347.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecium D344SRF] Length = 691 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 220/735 (29%), Positives = 356/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ +I + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 VIPFEILDIKTDRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRKEMIITQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 289 DQGMLLPYFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 329 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 330 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 382 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGD 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 442 LPETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSV 501 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 502 LQETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDL 561 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ EAEK L Sbjct: 562 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKEL 618 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L Sbjct: 619 HKAVEVMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQ 674 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 675 IAAMALSLASLDQII 689 >gi|223934266|ref|ZP_03626194.1| glycyl-tRNA synthetase, beta subunit [Streptococcus suis 89/1591] gi|302024384|ref|ZP_07249595.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis 05HAS68] gi|330833382|ref|YP_004402207.1| glycyl-tRNA synthetase beta chain [Streptococcus suis ST3] gi|223897065|gb|EEF63498.1| glycyl-tRNA synthetase, beta subunit [Streptococcus suis 89/1591] gi|329307605|gb|AEB82021.1| glycyl-tRNA synthetase beta chain [Streptococcus suis ST3] Length = 678 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 224/718 (31%), Positives = 361/718 (50%), Gaps = 87/718 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EEIPA + + L + L + + + ++ + TP RL + ++GL+ Sbjct: 4 NLLVELGLEEIPAYIVTPSMHQLRDRMATFLTDNRLAFDSIDVFSTPRRLAVRVRGLADQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T +D + ++ KG+ Y+ V + Sbjct: 64 QTDLTEDFKGPAKKIALDADGNFTKAAEGFVRGKGL-TTADIEFRE--IKGEEYVYVTKH 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +P ++ + +P SM W++ F++IRP+ ++ +L ++ Sbjct: 121 EAGQPAKAVLAGIPEVLKAMTFPVSMNWASNK-----FAYIRPVHTLTVLL-----DDEA 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+D +I G I+ GHRF + ++ S D Y DL V+ DP R+N I+ + Sbjct: 171 LDMDFLDITSGRISRGHRFLG-NETEIASADSYEADLRAQFVITDPAERQNMIVEQIKAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + + D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + Sbjct: 230 EDKHNVTVEIDEDLLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDK 289 Query: 296 EGVLANCFILV--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V N Q D +++GN +V+ ARLED FW+ DQ LK + Sbjct: 290 AGKLLPNFISVRNGNDQYLDN---VIKGNEKVLVARLEDGEFFWREDQK-------LKIA 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID------AD 407 L + RL + V FH KIG+ E + R +V+ +K+A L AD Sbjct: 340 DL-------------VERLKV--VTFHEKIGSLYEHMERTKVIAEKLADLAGLSAGEKAD 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 VA RA + K DL T +V EF ELQG +G++YA+L E + AI EH P Sbjct: 385 VA---RAADIYKFDLLTGMVGEFDELQGIMGEKYALLAGEKPAVAAAIREHYLPNSAEGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P +K+ ++LADK DTL++F+++ PSGS DPYALRRAT GI+RI+ +IPL Q Sbjct: 442 LPESKVGAVLALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWEIPLDQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 I ++Q ++ F R++ + D+ I D+ EA+L +V L Sbjct: 502 LIAELYSLNFASLTYDNQPAVMDFIRARVE-KMMDKTIPKDIREAVLASST----FVVRL 556 Query: 574 -IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + + F AK + + + + ++ + EK E++ I + EK L A ++ Sbjct: 557 QLAASSAIFQKAKEADYKEAVENLSRVFNLAEKA--EVT-AIDEALFENDQEKALAAAVA 613 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 G + E M D L ++ I FFD +V VDD V+ NRL+LL+ + + Sbjct: 614 --GLELTEDMAGNL-----DKLFALSPVIAAFFDNTMVMVDDAAVKANRLTLLKALAD 664 >gi|24114835|ref|NP_709345.1| glycyl-tRNA synthetase subunit beta [Shigella flexneri 2a str. 301] gi|30065154|ref|NP_839325.1| glycyl-tRNA synthetase subunit beta [Shigella flexneri 2a str. 2457T] gi|110807772|ref|YP_691292.1| glycyl-tRNA synthetase subunit beta [Shigella flexneri 5 str. 8401] gi|191165233|ref|ZP_03027076.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B7A] gi|193061668|ref|ZP_03042765.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E22] gi|194427395|ref|ZP_03059944.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B171] gi|209921023|ref|YP_002295107.1| glycyl-tRNA synthetase subunit beta [Escherichia coli SE11] gi|260846727|ref|YP_003224505.1| glycine tRNA synthetase, beta subunit [Escherichia coli O103:H2 str. 12009] gi|260858046|ref|YP_003231937.1| glycine tRNA synthetase, beta subunit [Escherichia coli O26:H11 str. 11368] gi|260870289|ref|YP_003236691.1| glycine tRNA synthetase, beta subunit [Escherichia coli O111:H- str. 11128] gi|300815213|ref|ZP_07095438.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 107-1] gi|300822039|ref|ZP_07102182.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 119-7] gi|300902750|ref|ZP_07120705.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 84-1] gi|301304611|ref|ZP_07210720.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 124-1] gi|309797584|ref|ZP_07691973.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 145-7] gi|331670392|ref|ZP_08371231.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA271] gi|331679639|ref|ZP_08380309.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H591] gi|81839217|sp|Q83J38|SYGB_SHIFL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123146479|sp|Q0SY78|SYGB_SHIF8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238064850|sp|B6I3C9|SYGB_ECOSE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24054068|gb|AAN45052.1| glycine tRNA synthetase, beta subunit [Shigella flexneri 2a str. 301] gi|30043415|gb|AAP19136.1| glycine tRNA synthetase, beta subunit [Shigella flexneri 2a str. 2457T] gi|110617320|gb|ABF05987.1| glycine tRNA synthetase, beta subunit [Shigella flexneri 5 str. 8401] gi|190904635|gb|EDV64341.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B7A] gi|192932458|gb|EDV85055.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E22] gi|194414435|gb|EDX30708.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B171] gi|209914282|dbj|BAG79356.1| glycyl-tRNA synthase beta subunit [Escherichia coli SE11] gi|257756695|dbj|BAI28197.1| glycine tRNA synthetase, beta subunit [Escherichia coli O26:H11 str. 11368] gi|257761874|dbj|BAI33371.1| glycine tRNA synthetase, beta subunit [Escherichia coli O103:H2 str. 12009] gi|257766645|dbj|BAI38140.1| glycine tRNA synthetase, beta subunit [Escherichia coli O111:H- str. 11128] gi|281602927|gb|ADA75911.1| Glycyl-tRNA synthetase beta subunit [Shigella flexneri 2002017] gi|300405178|gb|EFJ88716.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 84-1] gi|300525402|gb|EFK46471.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 119-7] gi|300532105|gb|EFK53167.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 107-1] gi|300840089|gb|EFK67849.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 124-1] gi|308118854|gb|EFO56116.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 145-7] gi|315254088|gb|EFU34056.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 85-1] gi|320201420|gb|EFW76001.1| Glycyl-tRNA synthetase beta chain [Escherichia coli EC4100B] gi|323153887|gb|EFZ40121.1| glycyl-tRNA synthetase beta subunit [Escherichia coli EPECa14] gi|323160673|gb|EFZ46612.1| glycyl-tRNA synthetase beta subunit [Escherichia coli E128010] gi|323944544|gb|EGB40615.1| glycyl-tRNA synthetase beta [Escherichia coli H120] gi|324017914|gb|EGB87133.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 117-3] gi|331062454|gb|EGI34374.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA271] gi|331072811|gb|EGI44136.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H591] gi|332749993|gb|EGJ80405.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-671] gi|332750151|gb|EGJ80562.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri 4343-70] gi|332751419|gb|EGJ81822.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri 2747-71] gi|332764240|gb|EGJ94477.1| glycyl-tRNA synthetase, &beta subunit [Shigella flexneri 2930-71] gi|332996373|gb|EGK16000.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri VA-6] gi|332996921|gb|EGK16540.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-272] gi|332997029|gb|EGK16645.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-218] gi|333012812|gb|EGK32189.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-304] gi|333013392|gb|EGK32764.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-227] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|257890448|ref|ZP_05670101.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257826808|gb|EEV53434.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,410] Length = 694 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 219/735 (29%), Positives = 356/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 7 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 67 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 123 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 124 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 173 IIPFEILDVKTDRASRGHRFLG-EDVTFTHAKEYEEKLNEQFVIASPQKRKEMIITQANE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 232 LAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 291 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 292 DQGMLLPHFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 332 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 333 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEE 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 385 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGD 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD++ +F+A+ PSGS DPYALRR G++R+I K PLS Sbjct: 445 LPETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRVIESKKWAFPLSV 504 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 505 LQETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDL 564 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ EAEK L Sbjct: 565 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKEL 621 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L Sbjct: 622 HKAVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQ 677 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 678 IAAMALSLASLDQII 692 >gi|293412993|ref|ZP_06655661.1| glycyl-tRNA synthetase [Escherichia coli B354] gi|291468640|gb|EFF11133.1| glycyl-tRNA synthetase [Escherichia coli B354] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTMLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|261208621|ref|ZP_05923058.1| glycyl-tRNA synthetase [Enterococcus faecium TC 6] gi|260077123|gb|EEW64843.1| glycyl-tRNA synthetase [Enterococcus faecium TC 6] Length = 694 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 220/735 (29%), Positives = 356/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 7 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 67 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 123 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 124 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ +I + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 173 VIPFEILDIKTDRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRKEMIITQANE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 232 LAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 291 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 292 DQGMLLPYFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 332 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 333 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEE 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 385 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGD 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 445 LPETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSV 504 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 505 LQETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDL 564 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ EAEK L Sbjct: 565 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKEL 621 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L Sbjct: 622 HKAVEVMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQ 677 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 678 IAAMALSLASLDQII 692 >gi|218556118|ref|YP_002389031.1| glycyl-tRNA synthetase subunit beta [Escherichia coli IAI1] gi|226737053|sp|B7M3I1|SYGB_ECO8A RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218362886|emb|CAR00520.1| glycine tRNA synthetase, beta subunit [Escherichia coli IAI1] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTSD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|218550844|ref|YP_002384635.1| glycyl-tRNA synthetase subunit beta [Escherichia fergusonii ATCC 35469] gi|218707192|ref|YP_002414711.1| glycyl-tRNA synthetase subunit beta [Escherichia coli UMN026] gi|293407181|ref|ZP_06651105.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1412] gi|298382930|ref|ZP_06992525.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1302] gi|300898729|ref|ZP_07117041.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 198-1] gi|331665183|ref|ZP_08366084.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA143] gi|331675048|ref|ZP_08375805.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA280] gi|226737054|sp|B7NEL0|SYGB_ECOLU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737056|sp|B7LTH3|SYGB_ESCF3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218358385|emb|CAQ91032.1| glycine tRNA synthetase, beta subunit [Escherichia fergusonii ATCC 35469] gi|218434289|emb|CAR15211.1| glycine tRNA synthetase, beta subunit [Escherichia coli UMN026] gi|284923591|emb|CBG36687.1| glycine-tRNA synthetase, beta subunit [Escherichia coli 042] gi|291425992|gb|EFE99026.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1412] gi|298276766|gb|EFI18284.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1302] gi|300357647|gb|EFJ73517.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 198-1] gi|323975029|gb|EGB70138.1| glycyl-tRNA synthetase beta subunit [Escherichia coli TW10509] gi|324007365|gb|EGB76584.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 57-2] gi|324111897|gb|EGC05877.1| glycyl-tRNA synthetase beta subunit [Escherichia fergusonii B253] gi|331057693|gb|EGI29679.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA143] gi|331067957|gb|EGI39355.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA280] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|323966028|gb|EGB61469.1| glycyl-tRNA synthetase beta subunit [Escherichia coli M863] gi|327251210|gb|EGE62903.1| glycyl-tRNA synthetase beta subunit [Escherichia coli STEC_7v] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESQDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|152989471|ref|YP_001345404.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PA7] gi|150964629|gb|ABR86654.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa PA7] Length = 685 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 212/718 (29%), Positives = 342/718 (47%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ L+ Sbjct: 6 DFLVELGTEELPPKALNSLGEAFLNGIEKGLKAAGLSYSAARFYAAPRRLAVLIEQLAVQ 65 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP + A GK +A GF + G+ QI K K + + Sbjct: 66 QPDRTVNLDGPPLQAAFDASGKPTQAALGFAKKCGVDL---EQIDKSGPKLRFSQTIAGQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L IV ++ ++P PK MRW+ ++RP + ++ + +++ Sbjct: 123 PA---AGLLPGIVETSLNELPIPKRMRWAARRD-----EFVRPTQWLVMLF-----GDEV 169 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D ++ G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 170 VDCEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKRVAEL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 230 AAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDA 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+N++ S IV GN +VV RL DA F+K+D+ Sbjct: 290 NGKLLPRFITVANVE-SKAPENIVSGNEKVVRPRLTDAEFFFKQDKK------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL+ RL +VVF A++GT ++ R+ L IA+ I D RA Sbjct: 336 -------QPLESFNERLQ--NVVFQAQLGTVFDKARRVSGLAAYIAERIGGDAQNAARAG 386 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 387 ILSKCDLATEMVGEFPEMQGIAGYYYATHGGEPEDVALALNEQYMPRGAGAELPSTLTGA 446 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 447 AVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVHAAVEQ 506 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + + +++ + + L ++ + F Sbjct: 507 YGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQAF 566 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E + KR+ ILA K E+ + L+ AEK L + +++ + + Sbjct: 567 RQLPEAEALAAANKRVSNILA---KSEDEVPASVDASLLVEAAEKALGSAVANAESEVAP 623 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ + L V ++ Sbjct: 624 LAAARDYRAALARLAALREPVDAFFADVMVNVDDSSVRANRYALLAKLRGLFLGVADI 681 >gi|16131430|ref|NP_418016.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|89110454|ref|AP_004234.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. W3110] gi|157163035|ref|YP_001460353.1| glycyl-tRNA synthetase subunit beta [Escherichia coli HS] gi|170018211|ref|YP_001723165.1| glycyl-tRNA synthetase subunit beta [Escherichia coli ATCC 8739] gi|170083068|ref|YP_001732388.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|194435847|ref|ZP_03067950.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 101-1] gi|238902648|ref|YP_002928444.1| glycine tRNA synthetase, beta subunit [Escherichia coli BW2952] gi|253771606|ref|YP_003034437.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038744|ref|ZP_04872800.1| glycyl-tRNA synthetase beta subunit [Escherichia sp. 1_1_43] gi|254163483|ref|YP_003046591.1| glycyl-tRNA synthetase subunit beta [Escherichia coli B str. REL606] gi|256025713|ref|ZP_05439578.1| glycyl-tRNA synthetase subunit beta [Escherichia sp. 4_1_40B] gi|300930911|ref|ZP_07146276.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 187-1] gi|300950351|ref|ZP_07164281.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 116-1] gi|301028172|ref|ZP_07191443.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 196-1] gi|301646007|ref|ZP_07245913.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 146-1] gi|307140250|ref|ZP_07499606.1| glycyl-tRNA synthetase subunit beta [Escherichia coli H736] gi|312972165|ref|ZP_07786339.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1827-70] gi|331644271|ref|ZP_08345400.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H736] gi|586056|sp|P00961|SYGB_ECOLI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166980038|sp|A8A616|SYGB_ECOHS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189082267|sp|B1IZN4|SYGB_ECOLC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229470697|sp|B1X8H5|SYGB_ECODH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|259511923|sp|C4ZXE9|SYGB_ECOBW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|466697|gb|AAB18536.1| glycine-tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|1789982|gb|AAC76583.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|85676485|dbj|BAE77735.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K12 substr. W3110] gi|157068715|gb|ABV07970.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli HS] gi|169753139|gb|ACA75838.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli ATCC 8739] gi|169890903|gb|ACB04610.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|194425390|gb|EDX41374.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 101-1] gi|226839250|gb|EEH71273.1| glycyl-tRNA synthetase beta subunit [Escherichia sp. 1_1_43] gi|238861373|gb|ACR63371.1| glycine tRNA synthetase, beta subunit [Escherichia coli BW2952] gi|242379077|emb|CAQ33878.1| glycyl-tRNA synthetase, beta subunit, subunit of glycyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253322650|gb|ACT27252.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975384|gb|ACT41055.1| glycyl-tRNA synthetase subunit beta [Escherichia coli B str. REL606] gi|253979540|gb|ACT45210.1| glycyl-tRNA synthetase subunit beta [Escherichia coli BL21(DE3)] gi|260447424|gb|ACX37846.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli DH1] gi|299878749|gb|EFI86960.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 196-1] gi|300450317|gb|EFK13937.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 116-1] gi|300461230|gb|EFK24723.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 187-1] gi|301075759|gb|EFK90565.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 146-1] gi|310334542|gb|EFQ00747.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1827-70] gi|315138136|dbj|BAJ45295.1| glycyl-tRNA synthetase subunit beta [Escherichia coli DH1] gi|315618402|gb|EFU98989.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 3431] gi|323934887|gb|EGB31269.1| glycyl-tRNA synthetase beta [Escherichia coli E1520] gi|323939541|gb|EGB35749.1| glycyl-tRNA synthetase beta subunit [Escherichia coli E482] gi|323959375|gb|EGB55035.1| glycyl-tRNA synthetase beta subunit [Escherichia coli H489] gi|323971318|gb|EGB66560.1| glycyl-tRNA synthetase beta subunit [Escherichia coli TA007] gi|331036565|gb|EGI08791.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H736] gi|332345527|gb|AEE58861.1| glycyl-tRNA synthetase beta subunit GlyS [Escherichia coli UMNK88] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|188493970|ref|ZP_03001240.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 53638] gi|188489169|gb|EDU64272.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 53638] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVAMNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|82779378|ref|YP_405727.1| glycyl-tRNA synthetase subunit beta [Shigella dysenteriae Sd197] gi|123560982|sp|Q328L9|SYGB_SHIDS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81243526|gb|ABB64236.1| glycine tRNA synthetase, beta subunit [Shigella dysenteriae Sd197] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFAIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDQ-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQLQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|77414048|ref|ZP_00790218.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] gi|77159890|gb|EAO71031.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] Length = 679 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 215/700 (30%), Positives = 360/700 (51%), Gaps = 82/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL ++ D + ++ + VY+ K I DVL + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGL-SVDDIEFREVKGEEYVYVTKHETGKSAI-DVLAS 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I G Sbjct: 133 VTEV-LTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I++ H + + + D Sbjct: 182 RISRGHRFLGS-DTEILSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKENISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL-DLSKPL 365 N A + +++GN +V+ ARLED FW+ DQ K N+ DL + L Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQ--------------KLNIADLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 Q V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 346 KQ---------VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE-FFSSAKGE 587 + ++ F R++ + + + D+ EA+L E+D IV LI ++ +K Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVL--ESDTY--IVSLILEASQALVQKSKDA 571 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHK 645 ++ +S + + + + EK +S++ Y L E EK LY I + E M Sbjct: 572 QYKVSVESLSRAFNLAEKVTHSVSVD----YSLFENNQEKALYQAI--LSLELTEDM--- 622 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 H D L ++ I FFD +V DD +++ NRL+LL Sbjct: 623 --HDNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALL 660 >gi|320193929|gb|EFW68562.1| Glycyl-tRNA synthetase beta chain [Escherichia coli WV_060327] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|319744263|gb|EFV96628.1| glycyl-tRNA synthetase beta subunit [Streptococcus agalactiae ATCC 13813] Length = 679 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 216/704 (30%), Positives = 360/704 (51%), Gaps = 90/704 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL ++ D + ++ + VY+ K I DVL + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGL-SVDDIEFREVKGEEYVYITKHETGKSAI-DVLAS 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I G Sbjct: 133 VTEV-LAELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I++ H + + + D Sbjct: 182 RISRGHRFLGS-DTEISSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL-DL 361 N G A +++GN +V+ ARLED FW+ DQ K N+ DL Sbjct: 301 RN-----GNAGHIENVIKGNEKVLVARLEDGEFFWQEDQ--------------KLNIADL 341 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLS 418 + L Q V FH KIG+ E + R++V+ + +A+ L D + V RA + Sbjct: 342 VEKLKQ---------VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIY 392 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++ Sbjct: 393 KFDLLTGMVDEFDELQGIMGEKYALLAGEKPAVAAAIREHYMPTSADGELPETRVGAILA 452 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADK DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + + Sbjct: 453 LADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFA 512 Query: 532 -------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE-FFSS 583 + ++ F R++ + + + D+ EA+L E+D IV LI ++ Sbjct: 513 SLDYANQKEVMAFISARIEKMIGSK-VPKDIREAVL--ESDTY--IVSLILEASQALVQK 567 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQES 641 +K ++ +S + + + + EK +S++ S L E EK LY I + E Sbjct: 568 SKDAQYKVSVESLSRAFNLAEKVTHSVSVDSS----LFENNQEKALYQAI--LSLELTED 621 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 M H D L ++ I FFD +V DD +++ NRL+LL Sbjct: 622 M-----HDNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALL 660 >gi|321312008|ref|YP_004204295.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis BSn5] gi|320018282|gb|ADV93268.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis BSn5] Length = 679 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/716 (29%), Positives = 356/716 (49%), Gaps = 59/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++K ++ Sbjct: 5 DLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKDVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF + G + D IK+ KG Y+ V + Sbjct: 65 QDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQG-ANVEDLYIKE--VKGIEYVFVQKF 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 L + I + +PK+MRW +IRP+K I+ + + + Sbjct: 122 QAGQETKSLLPELSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALF-----GQDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + G T GHRF H + ++S Y L+E V+ DP R+ I + + Sbjct: 172 IPFSITNVESGRTTQGHRFLG-HEVSIESPSAYEEQLKEQHVIADPSVRKQMIQSQLETM 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F + + Sbjct: 231 AAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFPVKDK 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 291 NGDLLPHFITVRNGN-SHAIENVARGNEKVLRARLSDASFFYKEDQ-------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 K N+D + + +L+ ++VFH ++G+ ++V R+ + +K+A + AD + V Sbjct: 336 KLNIDAN------VKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDTLKHVK 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR P+ Sbjct: 388 RAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGETPSTF 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--- 529 V++ADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I + + Sbjct: 448 TGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEELLTFV 507 Query: 530 ---EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + + Sbjct: 508 QTDKEIELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLGAP-- 565 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 F +A+ + ++++I +K R +I P E E +L+ ++QE+ K Sbjct: 566 -GFKETAEALGRVISISKKGVRG---DIQPDLFENEYEAKLFDAYQTAKQNLQENFSKKD 621 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 622 YEAALASLAALKEPIDAYFDHTMVIADNEALKANRLAQMVSLADEIKSFANMNALI 677 >gi|257065851|ref|YP_003152107.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus prevotii DSM 20548] gi|256797731|gb|ACV28386.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus prevotii DSM 20548] Length = 687 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 219/735 (29%), Positives = 363/735 (49%), Gaps = 82/735 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ + L L++E + +++ TP R + L + Sbjct: 1 MSNYLLEIGVEEIPSDYVKNTKKQLEDKFKKLIEENKLTCESISVESTPRRFAILLNNVE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 EK GP V G KK + GFLR G +SD I++ KG+ Y+ V Sbjct: 61 ADLTEKTVSVKGPSVKIAYDEGGEPKKPLLGFLRGQGAD-LSDVVIRE--FKGEDYIYVE 117 Query: 114 RKPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K K + + +VL+ V ++ + +P+SMRW+ + W RP++ + IL Sbjct: 118 KKEKSKSVAEVLRENVYELVKSISFPRSMRWAG-----KSIRWARPIRWFVSIL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D D + I G +T GHR + I++ + +Y + L+E V+L + R++ IL Sbjct: 168 DEVLDFDAEGISVGRVTKGHRSLGSNHIEIDEIQNYEKLLKENYVILKYKDRKDIILRGL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +RL+S VG E ++D+ LL+E+I +VE+ V +G DK YL +P+E+I +K +Q+ F Sbjct: 228 NRLSSEVGGEYMKDEALLDEVINIVEYPTVLIGGIDKDYLEIPKEVITTPMKDHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L F++V N + +V+GN +V+ ARLEDA F++ Sbjct: 288 LDENKNLLPYFLVVRN-GDEEFKENVVEGNKKVLVARLEDAKFFYE-------------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--IDADVAL 410 +D+ KPL+ + L+ L F +G + R+ L ++ Q I D+A Sbjct: 333 ------IDMKKPLEAYVDELENL--AFFEGLGNMKLKTERLMDLTERYRQALAIGEDMAH 384 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSKADL T++V EF ELQG +G+ YA E AIEE PR +P Sbjct: 385 PIGRAAYLSKADLVTKMVVEFTELQGTMGRIYASKSGEEERVATAIEESYMPRSSGSALP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I +S+ADK+DT++ +AI + +GS+DP+ LRRA LGII I LEN IDI L + + Sbjct: 445 KTITGIILSIADKMDTIVGLYAIEKYVTGSQDPFGLRRACLGIINIFLENSIDIDLRKLV 504 Query: 530 EDQNLIL-------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 D L+ FF DRLK L D + +D + +++ + N++ I Sbjct: 505 NDALLVYTEKNELAFDYDTAMDKVLDFFRDRLKNKLIDDGVSYDTVNSVINTDELNIIKI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 V K ++ F + + + RI + + + E+ + E+ Y Sbjct: 565 VKKAKSIDSFLEDNEDQVSYFT--RIVNL------SDYRVDAEVREDLFENDLERSFYEK 616 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI---FFDQVLVNVDDREVRDNRLSLLQY 687 I++ E + L+ I E EI + D ++NVDD EV++NR+++L Sbjct: 617 ITEL-----EDFSPSAEANFLEELNRIKETSEIGNTYLDNTMINVDDEEVKNNRIAMLNK 671 Query: 688 IKNIILIVINVQKIV 702 + I ++++++IV Sbjct: 672 LARRIEQILDIKEIV 686 >gi|293417006|ref|ZP_06659643.1| glycyl-tRNA synthetase [Escherichia coli B185] gi|291431582|gb|EFF04567.1| glycyl-tRNA synthetase [Escherichia coli B185] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEHIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|293391259|ref|ZP_06635593.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951793|gb|EFE01912.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 693 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 213/726 (29%), Positives = 353/726 (48%), Gaps = 71/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ ++N+ + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATAFADNVQAELNQAGLAFENIEWFAAPRRLAVKVLALATQ 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QPSKEIEKHGPAVSAAFDAEGNPTKAAEGWARGCGITVDQAERLASD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLADIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTIRGHRFLGEREFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF---- 290 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPLYE 292 Query: 291 -VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 ++G L FI VSNI D +AI++GN +VV RL DA F Sbjct: 293 KTEGDKDGKLLPHFIFVSNINPDDP-SAIIEGNEKVVRPRLTDAEFF------------- 338 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A Sbjct: 339 -------FKTDLKQKLVDRLPRLET--VLFQQQLGTLRDKTDRIEQLAGEIAKQIGADEA 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P Sbjct: 390 KAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + ++ +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 KSLVASSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLV 509 Query: 530 E-----------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++N++ F R + + D I D+I+A+L + Sbjct: 510 KKSAALFGDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVIS 632 + ++ F + E + KR+ ILA + EI+L + P AEK L + Sbjct: 570 RAVSHFRTLDSAEALAAANKRVANILAKADVAIGEINLTACVEP------AEKALAEAVL 623 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 T +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + Sbjct: 624 ALQTEVQPLIAKGEYTAVLDKLANLRTPVDNFFDNVMVNAEDPALRQNRLAILNTLQGLF 683 Query: 693 LIVINV 698 L V ++ Sbjct: 684 LQVADI 689 >gi|219871686|ref|YP_002476061.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis SH0165] gi|254781852|sp|B8F711|SYGB_HAEPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219691890|gb|ACL33113.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis SH0165] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 213/720 (29%), Positives = 351/720 (48%), Gaps = 63/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ + G+ +I D + V+ AV+ Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ A+ K+P PK+MRW ++RP+ ++ +L ++ Sbjct: 125 QPTK---NLLVGIISQALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ + G GHRF ++ D Y L+E V+ D R+ IL A Sbjct: 172 LIEGEILGVASGTTVRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D + I++GN +VV RL DA F Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F DL + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD R Sbjct: 334 ---FKTDLKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 449 ASSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 KLFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA E K IS EI L+ EK L + + Sbjct: 569 HFRTLDSAEALAAANKRVSNILAKVEGK---ISSEIDRTLLVEAEEKALAEQVITLQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 626 VPLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEDPKLRQNRQAILNNLRNLFLQVADI 685 >gi|306816088|ref|ZP_07450226.1| glycyl-tRNA synthetase subunit beta [Escherichia coli NC101] gi|305850484|gb|EFM50941.1| glycyl-tRNA synthetase subunit beta [Escherichia coli NC101] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGNVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|194431308|ref|ZP_03063601.1| glycyl-tRNA synthetase, beta subunit [Shigella dysenteriae 1012] gi|194420763|gb|EDX36839.1| glycyl-tRNA synthetase, beta subunit [Shigella dysenteriae 1012] gi|320182075|gb|EFW56980.1| Glycyl-tRNA synthetase beta chain [Shigella boydii ATCC 9905] gi|332085078|gb|EGI90258.1| glycyl-tRNA synthetase beta subunit [Shigella boydii 5216-82] gi|332085634|gb|EGI90798.1| glycyl-tRNA synthetase beta subunit [Shigella dysenteriae 155-74] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 338/718 (47%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL + V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQI--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|331685221|ref|ZP_08385807.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H299] gi|331077592|gb|EGI48804.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H299] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNTNVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAASLAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|315633368|ref|ZP_07888659.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter segnis ATCC 33393] gi|315477868|gb|EFU68609.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter segnis ATCC 33393] Length = 688 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 212/721 (29%), Positives = 350/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGNKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEK--KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA E +++L + P AE+ L + Sbjct: 570 FRTLDSAEALAAANKRVANILAKAEGDIGAIDVALCVEP------AEQVLAQSVLSLAKE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L + +P++ FFD V+VN +D ++R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGEYTAVLDKLAGLRQPVDNFFDNVMVNAEDAKLRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|257879933|ref|ZP_05659586.1| glycyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257814161|gb|EEV42919.1| glycyl-tRNA synthetase [Enterococcus faecium 1,230,933] Length = 694 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 220/735 (29%), Positives = 356/735 (48%), Gaps = 84/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 7 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNIPER 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 67 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 123 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 124 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ +I + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 173 VIPFEILDIKTDRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRKEMIITQANE 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 232 LAEKDHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 291 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G+L FI A +G +V+GN +V+ ARLEDA F Sbjct: 292 DQGMLLPHFI-----SARNGDRVKLENVVRGNQKVLTARLEDAEFF-------------- 332 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L + + Sbjct: 333 ------YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEE 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P + Sbjct: 385 LMDLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGD 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 445 LPETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSV 504 Query: 528 FIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 505 LQETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDL 564 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + + E F S + + +++ + +K E E+ P+ EAEK L Sbjct: 565 TKVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKEL 621 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L Sbjct: 622 HKAVEVMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQ 677 Query: 688 IKNIILIVINVQKIV 702 I + L + ++ +I+ Sbjct: 678 IAAMALSLASLDQII 692 >gi|317046302|ref|YP_004113950.1| glycyl-tRNA synthetase subunit beta [Pantoea sp. At-9b] gi|316947919|gb|ADU67394.1| glycyl-tRNA synthetase, beta subunit [Pantoea sp. At-9b] Length = 689 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAEAFAAQVTAELDAAGLAHGEVNWFAAPRRLALKVANLAAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D + VY A ++ Sbjct: 66 PDREVEKRGPAIAAAFDANGNATKAAEGWARGNGITVDQAERLSTDKGEWLVYRAQVKGE 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++ A+ K+P PK MRW S ++RP+ ++ +L +++I Sbjct: 126 S--AQTLLPAMIATALSKLPIPKLMRWGA-----SDVQFVRPVHTVTLLL-----GDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF I + D Y + L E V+ D R+ I DA + Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEITLDHADQYPQLLLERGKVVADYAARKAQIKADAEQA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 234 ALKLGGNADLSDSLLEEVTSLVEWPVVLTATFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++SD I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQKELGTLRDKTDRIQALAGWIAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D I+A+L +K ++ F Sbjct: 511 YGSKLSNGNVVDDVIDFMLGRFRTWYQEEGHSVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L E +L ++ + +Q Sbjct: 571 RTLEAATTLAAANKRVSNILA---KSTETLNDSVQASLLKENEEIQLATFVTALSSKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + E ++ FFD+V+VN DD+ VR NRL+LL ++ + L V ++ Sbjct: 628 YFAEGRYQDALIELAQLRESVDNFFDKVMVNADDQAVRINRLTLLAQLRELFLQVADI 685 >gi|145636932|ref|ZP_01792596.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittHH] gi|145269790|gb|EDK09729.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittHH] Length = 688 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 215/721 (29%), Positives = 349/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 KGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLLRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLSRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA + EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP------AEKALAEAVLALRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|258516200|ref|YP_003192422.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum acetoxidans DSM 771] gi|257779905|gb|ACV63799.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum acetoxidans DSM 771] Length = 698 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 223/731 (30%), Positives = 349/731 (47%), Gaps = 73/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI +EEIP+R A +L I + L+E + Y + Y TP RL LY++ L+ Sbjct: 4 DFLFEIGTEEIPSRFIAPALAELKEITVKALEENRLSYGKVNTYGTPRRLVLYIEALAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G +A GF +S + I D +++ + A+ ++ Sbjct: 64 QDSLLREVKGPAVKVAFTPEGEPTRAAVGFAKSQQVD-IKDL-VRRQVATVEYLYAIKQE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL + P+ I + +PK MRW + RP++ +L + E Sbjct: 122 LGRPAYEVLTELCPLLISSLHFPKPMRWGDLE-----VRFARPIRWLLALWGGE-----T 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + G +T+GHRF + P++V S Y+ L V++D + RR I L Sbjct: 172 VNFSFAGLSSGKVTFGHRFLS-GPLEVDSPKDYLARLRSNYVIVDIDERRQMIWQQIQNL 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G + D+DLLEE+ LVE+ GSF++KYL LP+E++ ++ +Q+ F Sbjct: 231 AEQSGGVVEPDEDLLEEVCNLVEYPTALCGSFEEKYLHLPKEVLITPMREHQRYFPVLDS 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI V N + GN +V+ ARL DA F Sbjct: 291 EGRLMPKFIAVRN-GIHKYLDTVRAGNEKVLRARLADAEFF------------------- 330 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VD 412 F DL PL ++ L VV+ +GT ++V R+ L ++ L+ A+ + Sbjct: 331 -FEEDLKTPLADKVEGLK--KVVYQESLGTVHDKVKRVIKLADYLSDLLIVGAAVKEQIM 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA VL KADL T +V EF ELQG +G+EYA+ E AI EH PR +++P Sbjct: 388 RAAVLCKADLVTNMVYEFTELQGIMGREYALKSGEEPVVAQAIFEHYLPRFAGDSLPETL 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------ 526 +++ADK DT+ +AI +P+GS+DP+ALRR LGI IIL + + I LS Sbjct: 448 PGKILAIADKFDTVAGCFAIGIQPTGSQDPHALRRQALGICHIILSSGLKISLSALVTAA 507 Query: 527 --QFIEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++E + + L FF RLK D + +D I+A+L D+ Sbjct: 508 YASYLEQEQVQLKLGLDELLVEMWVFFQIRLKNIFSDCGLGYDTIDAVLAAGFDDFSDTW 567 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + L++F + L R + KN +++ EI P++L+ ++E+ LY Sbjct: 568 ERARALSQFRNEPAFSDLLTVFNRANNL-----SKNVDVA-EIKPEFLVDDSERNLYDHF 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + MD K Y + + I EP+ FFD V+V +D +RDNRL+LL+ + + Sbjct: 622 LALKKQVAVEMDKKNYLGVLKAVAEIREPLGKFFDSVMVMAEDTNIRDNRLALLKSLAGL 681 Query: 692 ILIVINVQKIV 702 + V + KIV Sbjct: 682 MQSVADFSKIV 692 >gi|296333317|ref|ZP_06875770.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675178|ref|YP_003866850.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] gi|296149515|gb|EFG90411.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413422|gb|ADM38541.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] Length = 679 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 212/719 (29%), Positives = 358/719 (49%), Gaps = 65/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR + + L L G LKE+ + + ++ + TP RL +++K ++ Sbjct: 5 DLLLEIGLEEMPARFLNDSMVQLGEKLTGWLKEKNITHGEVKLFNTPRRLAVFVKDVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF + G + D IK+ KG Y+ V Sbjct: 65 QDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGAD-VKDLYIKE--VKGTEYVFV--- 118 Query: 116 PKRLIEDVLKTIVP---VAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K K+++P + + +PK+MRW +IRP+K I+ L +D Sbjct: 119 QKFQAGQETKSLLPELSGLVTSLHFPKNMRWGNED-----LRYIRPIKWIVA-LYGQD-- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + G T GHRF H + ++ Y L+E V+ DP R+ I + Sbjct: 171 --VIPFSITNVESGRTTQGHRFLG-HEVSIELPSAYEEQLKEQHVIADPNARKQMIQSQL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 228 EAMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + + G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 288 KDKNGELLPHFITVRNGN-SHAIENVARGNEKVLRARLSDASFFYKEDQ----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 K N+D + + +L+ ++VFH ++G+ ++V R+ + +K+A + AD + Sbjct: 336 ---KLNIDAN------VKKLE--NIVFHEELGSLADKVRRVTSIAEKLAGRLQADEDTLK 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR P Sbjct: 385 HVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGETP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V++ADKLDT+++F++I P+GS+DPY LRR GI+ I+L+ I + Sbjct: 445 STFTGAVVAMADKLDTIVSFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEELF 504 Query: 530 ------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + + Sbjct: 505 TFVQTDKENELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLGA 564 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 F +A+ + ++++I +K R +I P E E +L+ ++QE+ Sbjct: 565 P---GFKETAEALGRVISISKKGVRG---DIQPDLFENEYEAKLFDAYQTAKQNLQENFS 618 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 619 KKDYEAALASLAALKEPIDAYFDHTMVIADNETLKANRLAQMVSLADEIKSFANMNALI 677 >gi|288933065|ref|YP_003437124.1| glycyl-tRNA synthetase subunit beta [Klebsiella variicola At-22] gi|288887794|gb|ADC56112.1| glycyl-tRNA synthetase, beta subunit [Klebsiella variicola At-22] Length = 689 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVANLAAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMIASSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + IP + GHRF + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA ++ +I + L AE +L + +Q Sbjct: 571 RTLEESSALAAANKRVSNILAKSDETLNDI---VHASVLKEAAEIKLAGNLVVLRDKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V ++ Sbjct: 628 YFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQVADI 685 >gi|300920443|ref|ZP_07136877.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 115-1] gi|300412576|gb|EFJ95886.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 115-1] Length = 689 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|58696740|ref|ZP_00372283.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|225629952|ref|YP_002726743.1| glycyl-tRNA synthetase, beta subunit [Wolbachia sp. wRi] gi|58537077|gb|EAL60201.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|225591933|gb|ACN94952.1| glycyl-tRNA synthetase, beta subunit [Wolbachia sp. wRi] Length = 705 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 225/723 (31%), Positives = 353/723 (48%), Gaps = 72/723 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP-HS 63 L E SEEIP RMQ+ A + + + + V + +M + T R+ L++ ++ Sbjct: 6 LFECLSEEIPPRMQNSATVQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNINALEL 65 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 + E GP + A K AI+GFLR Q + + + D Y I + Sbjct: 66 KDSNNEVKGPNINAPKSAIEGFLRK--YQKNEEDLLVRKVNNEDFYFIKRESCSFNIREF 123 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 LK + ++ W KSMRW W+RP+K+ILCIL ++II + I Sbjct: 124 LKNQLEEMLKNFSWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPVSFAGI 173 Query: 184 PCGNITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 N TYGHRF + + V++ Y LE+ V+L + R+ IL+ ++ L+ Sbjct: 174 TASNTTYGHRFLSSGTALTVKAPKDYFELLEKNSVILQMDKRKQFILDQINKFTKEQNLQ 233 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDK-KYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 L ++ LL E+ GL+EW V G ++ K LP+E+I + T QK G + Sbjct: 234 LEKNDYLLNELTGLIEWPIVLFGEVNQEKSFGLPKEVILSIVNTQQKYLALSN--GKRIS 291 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+ V N+ +V+G+ R++ ARL DA +D+ KE+ Sbjct: 292 HFVTVVNVNN----GEVVKGHERILEARLADAQFLISQDK---------KEN-------- 330 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLSKA 420 LD + +L ++FHA +G+ GE+V RI L K IA I A + V+RA L+KA Sbjct: 331 ---LDYYVKKLG--SILFHASLGSVGEKVKRITALSKYIAIFIPHASLIKVERAAYLAKA 385 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T IVREFPELQG +G YA E+ +AI EH KP GP + P + +I VS+A Sbjct: 386 DLATSIVREFPELQGVMGGYYASYFQEDREIVEAITEHYKPIGPEQECPKSPSAIAVSIA 445 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----------SQFI 529 DK+D+L+ A EK SGS D + LRR T+GIIR ILEN + IP+ S+ + Sbjct: 446 DKVDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILENNLHIPIRLMIDKSVSLYSRLL 505 Query: 530 EDQN---------------LILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDL 573 ++N + F +R K+ L +RDIR D++++IL ++LLT Sbjct: 506 FNKNTTSVDKPNRKQISELVFRFCLERFKVILKNRDIRQDIVDSILYKIGINDLLTAEKQ 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L+ + S +GE+ L + KR+ +++ + + S ++L+ E L Sbjct: 566 TVILDRYLSMPEGEQILSTYKRVSNMMSKVRKSDGTTYSASYGKRFLIENEEIALSNCAI 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 +I++++ + ++ D L I F D V +N D ++R NRLSLL+ + +I Sbjct: 626 TACKNIKQAIKNNHFNAALDELAGFAPFINQFMDSVKINCDSDKLRRNRLSLLENVVSIF 685 Query: 693 LIV 695 +V Sbjct: 686 HLV 688 >gi|116491024|ref|YP_810568.1| glycyl-tRNA synthetase, beta subunit [Oenococcus oeni PSU-1] gi|122276794|sp|Q04F69|SYGB_OENOB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116091749|gb|ABJ56903.1| glycyl-tRNA synthetase beta chain [Oenococcus oeni PSU-1] Length = 689 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 225/741 (30%), Positives = 361/741 (48%), Gaps = 93/741 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D+LLEI EEIPA + ++ L + + + Y+ ++ + TP RL + + LS Sbjct: 1 MADYLLEIGLEEIPAHLVTESENQLIERIKNFFSDNLLDYKKIQTFSTPRRLAVLVHDLS 60 Query: 61 PHSPEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +S K EE GP + K +A +GF RS G + D + G VYL Sbjct: 61 NYSQSKDEELRGPSLKVAKDESGNWSRAAEGFARSQGT-----SPAEFDERDGYVYLNKH 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + E++LK I ++K+ + M+W+ ++RP++ ++ +L Sbjct: 116 IEGVS-AEEILKKIGIEVVEKMKFSTYMKWADFK-----LEYVRPIRWLVSLL-----DS 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 KI+ + ++ T GHRF + I + Y L A V++D + R+N+I N Sbjct: 165 KIVPFQILDVKADRFTRGHRFLSGGKISISEAGDYEETLNNAYVIVDAKVRKNSIRNQIR 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A L D DLLEE+ +VE+ F G FD KYL LPE ++ +++ NQ+ F Sbjct: 225 KIADTNDWNLHVDPDLLEEVNNIVEYPTAFAGVFDDKYLNLPEIVLTTSMRDNQRFFYVT 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + FI V N S+ +V+GN +V+ ARLEDA F++ DQ Sbjct: 285 NKQGKILPHFISVRN-GDSNQIENVVKGNEKVLVARLEDAEFFFEEDQ------------ 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 K N+D +R+ VFH KIGT E + R+ +KIA L+ +A D Sbjct: 332 --KHNIDFFMKKAERL--------VFHEKIGTMTEHMKRV----EKIAALLANQLAFNDQ 377 Query: 413 ------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 RA + K DL T +V EF ELQG + YA + EN + C A+ E P Sbjct: 378 EKKDLKRAANICKFDLTTAMVGEFAELQGTMAGIYAKIFGENQTVCQALSEQYLPTSSEG 437 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++P +K+ ++LADKLDTL +F+A PSGS DPY LRRA LGI+RII + K + +S Sbjct: 438 DLPKSKVGAMLALADKLDTLFSFFAAGIIPSGSNDPYGLRRAALGIVRIIGQQKWNFSVS 497 Query: 527 QFI----------ED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + + ED + +I FF DR++ DIR+DL++A Sbjct: 498 KLLHSLKTAVDKHEDGFLIDFADTKEISRKVIEFFLDRIR--QQSSDIRYDLLDASTGKV 555 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKF--LLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 N+ ++ + K + S F ++ A Q LA + K N +EI P+ + Sbjct: 556 NEGIINYI--FKRVRILASHVADPDFRDVIEALTRVQNLAEKNKSN----VEIDPELFVT 609 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 +EKRLY + D + S K H + L S+ EPI +FD+ ++ + +++NR Sbjct: 610 NSEKRLYQLTKDKDPIVLLS---KGDHTVYQFLASLKEPINNYFDENMIMDKNPIIKNNR 666 Query: 682 LSLLQYIKNIILIVINVQKIV 702 ++ + + N+I + +++K+V Sbjct: 667 VAQINLLNNLISSLGDLRKVV 687 >gi|74314188|ref|YP_312607.1| glycyl-tRNA synthetase subunit beta [Shigella sonnei Ss046] gi|157156177|ref|YP_001465034.1| glycyl-tRNA synthetase subunit beta [Escherichia coli E24377A] gi|218697274|ref|YP_002404941.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 55989] gi|256020906|ref|ZP_05434771.1| glycyl-tRNA synthetase subunit beta [Shigella sp. D9] gi|293453868|ref|ZP_06664287.1| glycyl-tRNA synthetase [Escherichia coli B088] gi|300925635|ref|ZP_07141500.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 182-1] gi|307314647|ref|ZP_07594247.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli W] gi|332282126|ref|ZP_08394539.1| glycyl-tRNA synthetase subunit beta [Shigella sp. D9] gi|123759516|sp|Q3YVU0|SYGB_SHISS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166980037|sp|A7ZTA5|SYGB_ECO24 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781849|sp|B7L6X3|SYGB_ECO55 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|73857665|gb|AAZ90372.1| glycine tRNA synthetase, beta subunit [Shigella sonnei Ss046] gi|157078207|gb|ABV17915.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E24377A] gi|218354006|emb|CAV00497.1| glycine tRNA synthetase, beta subunit [Escherichia coli 55989] gi|291321994|gb|EFE61425.1| glycyl-tRNA synthetase [Escherichia coli B088] gi|300418253|gb|EFK01564.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 182-1] gi|306905860|gb|EFN36384.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli W] gi|315062845|gb|ADT77172.1| glycine tRNA synthetase, beta subunit [Escherichia coli W] gi|323166949|gb|EFZ52688.1| glycyl-tRNA synthetase beta subunit [Shigella sonnei 53G] gi|323174217|gb|EFZ59845.1| glycyl-tRNA synthetase beta subunit [Escherichia coli LT-68] gi|323182714|gb|EFZ68116.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1357] gi|323376564|gb|ADX48832.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli KO11] gi|324116562|gb|EGC10479.1| glycyl-tRNA synthetase beta subunit [Escherichia coli E1167] gi|332104478|gb|EGJ07824.1| glycyl-tRNA synthetase subunit beta [Shigella sp. D9] Length = 689 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|330890240|gb|EGH22901.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. mori str. 301020] Length = 684 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 211/718 (29%), Positives = 336/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+IY + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLIYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G+ +I + K +L K Sbjct: 65 QPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDL---SEIDQSGPKLRYSQTILGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P K MRW ++RP + ++ + +++ Sbjct: 122 P---TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 VDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDA 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ K+ Sbjct: 289 EGKLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF A++G+ ++ R+ L IA I D RA Sbjct: 339 TFNDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 386 LLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|297569675|ref|YP_003691019.1| glycyl-tRNA synthetase, beta subunit [Desulfurivibrio alkaliphilus AHT2] gi|296925590|gb|ADH86400.1| glycyl-tRNA synthetase, beta subunit [Desulfurivibrio alkaliphilus AHT2] Length = 696 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 215/707 (30%), Positives = 353/707 (49%), Gaps = 72/707 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EEIPA A + L L L+E + + + TP RL + ++GL+ Sbjct: 9 ELLLEIGAEEIPAGYLMPALKALQAGLAQGLREHELAFGEINTGATPRRLAVSVQGLAAR 68 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++EE +GP A GK KA GF + G+ ++ + Q+ PK G+ A + + Sbjct: 69 QPDRVEEAMGPPKKAAFDADGKPTKAALGFASTKGV-SVDELQVVATPK-GEYLQARVEQ 126 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R ++L ++P I +P+PKSMRW + + RPL+ +L + + + Sbjct: 127 PGRATAEILNDLLPGLITGLPFPKSMRWGNGKT-----HFARPLRWLLAVY-----QGRS 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L+E+ G+ T+GHRF AP I+ + Y L + VL+DP RR A++ + +R Sbjct: 177 LAFSLEELSAGDHTWGHRFLAPQSIQATTFSTYRDQLRQYQVLVDPAERRQAMVAEINRA 236 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ G ++ D +L E + LVE GSF +++L LP E++ +++ +QK F Sbjct: 237 AAEAGGRILPDPELEETVTNLVEAPFAICGSFAERFLQLPREVLITSMREHQKYFAVVDE 296 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L F+ V+N + D A +G+ RV+ ARLEDA F Sbjct: 297 QDNLQPRFVAVNNTRVKDP-AVGAEGHQRVLRARLEDAFFF------------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDRA 414 FN D +PL Q RL+ ++F ++GT ++ +R+ L ++A ++ A V RA Sbjct: 337 -FNEDQQRPLSQLAGRLN--GIIFQHQLGTMADKTARLEQLAGRLADEFAPELSAAVRRA 393 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EFP LQG IG++YA Q E+ +A+ H P +P ++ Sbjct: 394 AQLCKADLLTSMVDEFPSLQGNIGRDYARRQGESEEVAEALYSHYLPLRAGGQLPQDRTG 453 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK--------IDIPLS 526 + +AD+LDTL + I K +G+ DP+ LRR +G+I ++L +K I+ LS Sbjct: 454 ALLGIADRLDTLAGCFGIGLKVTGAADPFGLRRQAVGLIHLLLGHKLKLPLKPWIETALS 513 Query: 527 QF---IEDQ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + +++Q L+ F RL L R + + +EA+L + + + D + Sbjct: 514 LYDCQLQEQPAAARDRLLEFIKGRLANDLTGRGLPAEAVEAVL---SVDFQEVNDCQARI 570 Query: 578 NEFFSSAKGEKFLL---SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + F L S KR+ I+ K NR+ I PQ L AEK L AV++ Sbjct: 571 EALVAVSSQPSFTLLAGSFKRVNNII----KDNRDD--RIDPQLLQEPAEKELAAVLARV 624 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y Q + + ++ EPI+ FFDQV+V +D +++ NR Sbjct: 625 TAAAAPLLRDGAYRQTLEHILTMKEPIDRFFDQVMVMAEDEQLKRNR 671 >gi|104779330|ref|YP_605828.1| glycyl-tRNA synthetase subunit beta [Pseudomonas entomophila L48] gi|166227918|sp|Q1IH28|SYGB_PSEE4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|95108317|emb|CAK13011.1| glycyl-tRNA synthetase, beta chain [Pseudomonas entomophila L48] Length = 684 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 212/724 (29%), Positives = 346/724 (47%), Gaps = 76/724 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + + L+ G+ Y + + Y P RL + L+ L Sbjct: 5 DFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTSKQVYAAPRRLAVLLRQLDVQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G++ +SD + PK LR Sbjct: 65 QPDRSINIDGPPRQAAFDAEGNPTQAALGFAKKCGVE-LSDID-QSGPK--------LRF 114 Query: 116 ----PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + +L TIV ++ +P PK M W + ++RP + ++ +L Sbjct: 115 SQHIPGKATASLLPTIVEDSLNDLPIPKRMHWGASRE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 GDQVVDCTILAQKAGRESRGHRFHHPENVVITTPANYVEDLRKAYVLADFAERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELAMQQEGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+N+++ D IV+GN +VV RL DA F+K+D+ Sbjct: 285 LLDSEGKLLPRFITVANVESRDP-KQIVEGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L IA I A Sbjct: 335 -----------QPLESFNERLK--NVVFQAQLGTVFDKAERVSKLAAFIAPYIGGSAANA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 GRAGLLSKCDLASEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTTAVEF 501 Query: 531 --------------DQNLILFFHDRLKLYLHDR--DIRHDLIEAILRPENDNLLTIVDLI 574 + ++ F DRL+ D D+ L L+P + L + Sbjct: 502 AVKQFGTKVKAAGLSEQVLEFIFDRLRARYEDEGIDVATYLSVRALKP--GSALDFDQRV 559 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + F + + KR+ +L K I+ ++ P+Y E LY+ I Sbjct: 560 QAVQAFRKLPEANALAAANKRVSNLLG---KAEGAIADQVEPKYFDNANEFSLYSAIQQA 616 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +Q ++Y++ L ++ +P++ FF+ VLVN +D +VR NR +LL ++ + L Sbjct: 617 DQAVQPMASARQYNEALARLAALRDPVDAFFEAVLVNAEDAKVRANRYALLSRLRGLFLG 676 Query: 695 VINV 698 V ++ Sbjct: 677 VADI 680 >gi|311031644|ref|ZP_07709734.1| glycyl-tRNA synthetase subunit beta [Bacillus sp. m3-13] Length = 693 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 205/730 (28%), Positives = 362/730 (49%), Gaps = 73/730 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PAR + L + L+ + Y+++ Y TP RL + ++GL Sbjct: 5 DFLFEIGLEEMPARFVTDSMNQLQEKVKAWLETNQLAYEDIHAYSTPRRLAILIEGLVER 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G KA GF R GL T+ D K+ G Y+ V + Sbjct: 65 QEDVTLEAKGPAKKVALTADGDWSKAAQGFTRGQGL-TVEDIYFKE--INGVEYVHVKKH 121 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + +++L I VA + +PK+MRW+ ++RP+K ++ + E+ Sbjct: 122 VEGKETKEILSGIASVATS-LHFPKNMRWADED-----LRYVRPIKWLIALF-----GEE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I +++ ++ ++ GHRF ++++ Y+ +L V+++ R+ AI Sbjct: 171 VIPVEIAKVKSDRVSTGHRFLGGQ-VELKDAGSYVEELLSNYVIVNATERKEAIRKQLSI 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + G + D+ LLEE+ LVE+ G+F+ +YL LPEE++ ++K +Q+ F ++ Sbjct: 230 IGEENGWNIPVDEALLEEVNNLVEYPTALFGTFESEYLTLPEEVLITSMKEHQRYFPVKS 289 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L F+ V N + + +GN +V+ ARL DA F K D+ + Sbjct: 290 DEGTLLPYFVTVRN-GNHENLDNVARGNEKVLRARLSDAAFFSKEDEKLV---------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---V 411 +D+ + +LD +VFH +IGT G++V R++ + +A++++ D V Sbjct: 339 ----------IDEAIKKLD--KIVFHEEIGTTGDKVRRVQTIATDLAKVVNVDNETQKHV 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA + K DL + +V EFPELQG +G++YAV + E+ AI EH PR + ++ Sbjct: 387 ERAASIYKFDLVSHMVYEFPELQGIMGEKYAVAKGESPVVAKAINEHYMPRSAEDQTASS 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + +S+++K+DT++ F+AI P+GS+DPYALRR GII+ IL L F+ Sbjct: 447 DVGAILSISEKMDTIVGFFAIGVIPTGSQDPYALRRQASGIIQTILNKDWTFSLETFMHS 506 Query: 532 -------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +++++FF RLK L +R +R+D++EA+L +N+ + V Sbjct: 507 LVERYVEKGIAKKDTNEIMEDILVFFKLRLKNNLSERGVRYDIVEALLELPLENVCSTVK 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L + A ++ + S R+ I K +S E+ L E E+ LY + Sbjct: 567 KAETLETKKNEADFKETMESLSRVCNI-----AKKATLSTEVQENLLNQEQEQELYKQFN 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + + + + + L S+ I+ FFD ++V +D ++ NRL+L+ + +I Sbjct: 622 SKKDLVLRAAEDQDFSLAYEELASLKPAIDAFFDNIMVMTEDEAIKANRLALMDDMAKVI 681 Query: 693 LIVINVQKIV 702 I NV I+ Sbjct: 682 AIFGNVNGII 691 >gi|325686948|gb|EGD28972.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK72] Length = 679 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 217/718 (30%), Positives = 358/718 (49%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ ++ G+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEYITFRE--INGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLGKE-TEISSADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 GEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGE---RVSRIRVLGKKIAQLIDAD 407 ++A D+++ V FH KIG+ E R +I L K A L + Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHIERTGKIAALLAKEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + E+Q +L FF R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYGLKFDSLSYENQEAVLDFFRARVE-KMMDRSIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + + I+ + EK LYA I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--INSALFENQEEKDLYAAIEA 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD ++ D L ++ I+ FF+ +V +D+ VR+NRL+LL Sbjct: 616 VELTSDLAANL-------------DQLFALSPVIDAFFEHTMVMAEDKAVRNNRLALL 660 >gi|325478380|gb|EGC81495.1| glycine--tRNA ligase, beta subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 688 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 219/732 (29%), Positives = 366/732 (50%), Gaps = 76/732 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ L L+ + + + TP R ++L+ ++ Sbjct: 2 MSNYLLEIGVEEIPSDYVKNTKNQLKEKFEKLITDNKLTCDEIVVESTPRRFAIFLENIN 61 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EK GP V G KK + GFL+ G + ISD I++ KG+ Y+ V Sbjct: 62 ADTEEKTISVKGPSVKIAYDEGGEPKKPLLGFLKGQGAE-ISDVVIRE--FKGEDYIYVE 118 Query: 114 RKPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K K + + +VL+ V ++ + +P+SMRW + W RP++ + +L Sbjct: 119 KKEKAKSVAEVLEENVYDLVKSISFPRSMRWRG-----KSIRWARPIRWFVSLL-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ D ++I NIT GHR + I V +++Y + L E V+L + R++ IL Sbjct: 169 DEILAFDAEDISVSNITKGHRSLGSNHIVVDKIENYEKLLRENYVILRYKDRKDLILRGL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +RL+S VG E ++D DLL+E+I +VE+ V +G DKKYL LP+E+I +K +Q+ F Sbjct: 229 NRLSSEVGGEYMKDADLLDEVINIVEYPTVLIGDIDKKYLELPKEVITTPMKDHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L F+LV N + +V+GN +V+ ARLEDA F+ Sbjct: 289 EDENKNLLPYFLLVRNGDDTHS-ENVVEGNKKVLVARLEDAKFFY--------------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK--KIAQLIDADVAL 410 ++D+ KPLD + D+ ++ F +G + R+ L + ++A I D+A Sbjct: 333 -----DIDMKKPLDAYVD--DLENLAFFEGLGDMKLKTKRLERLAENYRLALDIGDDMAH 385 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSKADL T++V EF ELQG +G+ YA E AIEE PR + +P Sbjct: 386 PIGRAAYLSKADLVTKMVVEFTELQGTMGRIYAEKSGEEERISTAIEEAYMPRSAGDKLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I +S+ADK+DT++ +AI + +GS+DP+ LRRA LGII I LEN ID+ L + I Sbjct: 446 KTITGIVLSIADKMDTIVGLYAIEKYVTGSQDPFGLRRACLGIINIFLENSIDVDLRKLI 505 Query: 530 EDQNLIL-------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 D LI FF DRL+ L D ++D + A+L+ N+L + Sbjct: 506 GDALLIYTEENELSFDYDLAMEKTLDFFRDRLRNKLIDDGHKYDTVNAVLKDGELNILKL 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ L++F + E + R+ + + + E++ L + EK +A Sbjct: 566 TKKVEALDKFLE--ENEDQISYFTRVVNL------SDSNVGEEVNKDLLEGDLEKDFFAE 617 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + G + + S Y + + + E + D ++NV+D +++ NR+++L + Sbjct: 618 VKALGEYKESS--ETDYLKELENIKMTSEVGNNYLDNTMINVEDEDLKANRIAMLNILAR 675 Query: 691 IILIVINVQKIV 702 I + +V+++ Sbjct: 676 RIKEIFDVKELA 687 >gi|15804104|ref|NP_290143.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 EDL933] gi|12518293|gb|AAG58707.1|AE005582_10 glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EDL933] Length = 689 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANXXAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|242237521|ref|YP_002985702.1| glycyl-tRNA synthetase subunit beta [Dickeya dadantii Ech703] gi|242129578|gb|ACS83880.1| glycyl-tRNA synthetase, beta subunit [Dickeya dadantii Ech703] Length = 689 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 334/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ YQ++ + P RL L + GLS Sbjct: 6 FLVEIGTEELPPKALRNLAESFAANFTAELDTAGLGYQSVNWFAAPRRLALKVAGLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 PDREVEKRGPAIAQAFDAAGHPTKAAEGWARGCGITVSQAERLTTD--KGEWLLFRAQVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L E ++ Sbjct: 124 GEAAQALLPGMVSAALAKLPIPKLMRWGDNDT-----QFVRPVHTVTLLLGDELVPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D GHRF + + D Y + L E VL D E R+ I DA Sbjct: 179 GID-----SARTLRGHRFMGEPEFTIDNADQYPQILLERGKVLADYEARKAQIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARNIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGTLRDKTDRIAALAGWVAGQIGADVNHAKRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSSPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E ++ + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKRLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K ++ + L E +L ++ + + Sbjct: 571 RTLEQAAALAAANKRVSNILA---KSTETLNDGVQAALLKENEEIQLATYVTALTSKLAP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + E ++ FFD+V+VN +D++VR NRL+LL ++N+ L V ++ Sbjct: 628 WFAEGRYQEALVELAQLRESVDNFFDKVMVNAEDQQVRINRLTLLNELRNLFLKVADI 685 >gi|261494658|ref|ZP_05991138.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309623|gb|EEY10846.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 688 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 207/720 (28%), Positives = 356/720 (49%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQSGLAFEKVEWFAAPRRLAVKVLSLAES 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ +I D + V+ AV+ Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK+MRW ++RP+ ++ + AE Sbjct: 125 QPTK---NLLVDIIAKSLANLPIPKTMRWGDKSE-----QFVRPVHTVTLLFGAE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ + G GHRF +++ D Y + L++ V+ D R+ IL + Sbjct: 172 LIEGEILGVKSGRTIRGHRFLGEREFTIENADQYPQLLKDRGSVVADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +++G L FI VSNI D + I++GN +VV RL DA F Sbjct: 292 SKDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F DL + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD R Sbjct: 334 ---FKTDLKQKLEDQLPRLET--VLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + I D+I+A+L ++ ++ Sbjct: 509 QLFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K + I +I + AEK L + + Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KADIAIG-DIDVSACVEPAEKALAEAVIALKAEV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + Y + D L ++ +P++ FFD V+VN +D+++R NRL++L ++ + L V ++ Sbjct: 625 QPLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVADI 684 >gi|152978094|ref|YP_001343723.1| glycyl-tRNA synthetase subunit beta [Actinobacillus succinogenes 130Z] gi|171472951|sp|A6VLE1|SYGB_ACTSZ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|150839817|gb|ABR73788.1| glycyl-tRNA synthetase, beta subunit [Actinobacillus succinogenes 130Z] Length = 689 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 214/720 (29%), Positives = 348/720 (48%), Gaps = 63/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +F EI +EE+P + K A + + LK+ G+ + + + P RL + + L+ + Sbjct: 5 NFFAEIGTEELPPKALKKLATAFAENVENELKQAGLAFDKVEWFAAPRRLAVKVLNLAAN 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVDQAERLVTDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + +++ I+ ++ +P PK+MRW + ++RP+ ++ +L E Sbjct: 125 QPTK---NLMLDIIAKSLANLPIPKTMRWGDKN-----VQFVRPVHTVTLLLGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ I G GHRF ++ D Y LEE V+ D RR IL + Sbjct: 172 LIEGEILGIASGRTIRGHRFLGEREFQISHADQYPSLLEEKGCVIADFNKRREMILTKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G + DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEDDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI VSNI D I++GN +VV RL DA F Sbjct: 292 DKEGKLLPHFIFVSNINPVDP-MPIIEGNEKVVRPRLSDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D + L+ + RL V+F ++GT ++ RI+ L +IA I AD A +R Sbjct: 334 ---FNTDKKQRLEDLLPRLQT--VLFQQQLGTLLDKTKRIQSLAGEIAGQIGADKAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ ++ Sbjct: 449 ASSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLSLDLADLVKKSA 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 ALFGDKLTNANVVDDVVDFMLGRFRAWYQDGGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K EI EI LL EK L + + + Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVAGEIRSEIDRTLLLEAEEKALAEQVLALQSEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 626 APVFAKGDYQTALDRLACLREVVDNFFDKVMVNAEDEKLRQNRQAMLNVLRNLFLQVADI 685 >gi|197334221|ref|YP_002154788.1| glycyl-tRNA synthetase, beta subunit [Vibrio fischeri MJ11] gi|238690288|sp|B5FEW0|SYGB_VIBFM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197315711|gb|ACH65158.1| glycyl-tRNA synthetase, beta subunit [Vibrio fischeri MJ11] Length = 688 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 213/719 (29%), Positives = 346/719 (48%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + +Q ++ Y TP RL L + L+ Sbjct: 4 NFLIELGTEELPPTALRSLAEAFASNFEAELKAADLAHQGVKWYATPRRLALKVAELAES 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G+ ++K D KG+ L Sbjct: 64 QADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVEQAERLKTD--KGEWLLHKEEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++++ A+ +P PK+MRW S +IRP+K++ +L +++ Sbjct: 122 KGKPVQELVVDFAAKALAGLPIPKAMRWGN-----SDIQFIRPVKTLTILL-----GDEL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ + + GHRF + S D Y LEE V+ D + R+ IL D+ + Sbjct: 172 IEGSILGVSSARTLRGHRFMGESEFTIDSADQYPAILEERGKVMADYDARKAIILADSEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGKADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIGADVEKSQRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPSTDIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V++ADKLDTL+ + I + P GS DP+ALRRA LG++RII+E + ++ L + Sbjct: 449 ASVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKEYNLDLVDLVAKAQS 507 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDKLSNANVATDVIDFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDKRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRELDAAESLAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEKVEILAEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 625 PVFAAGNYQEALSRLAELREPVDAFFDNVMVMADDEALKTNRLTLLNKLRNLFLDIADI 683 >gi|25010334|ref|NP_734729.1| glycyl-tRNA synthetase subunit beta [Streptococcus agalactiae NEM316] gi|81446313|sp|Q8CX30|SYGB_STRA3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|23094686|emb|CAD45905.1| glycyl-tRNA synthetase (beta subunit) [Streptococcus agalactiae NEM316] Length = 679 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 215/700 (30%), Positives = 360/700 (51%), Gaps = 82/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL ++ D + ++ + VY+ K I DVL + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGL-SVDDIEFREVKGEEYVYVTKHETGKSAI-DVLAS 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I G Sbjct: 133 VTEV-LTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I++ H + + + D Sbjct: 182 RISRGHRFLGS-DTEILSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKENISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL-DLSKPL 365 N A + +++GN +V+ ARLED FW+ DQ K N+ DL + L Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQ--------------KLNIADLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 Q V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 346 KQ---------VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE-FFSSAKGE 587 + ++ F R++ + + + D+ EA+L E+D IV LI ++ +K Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVL--ESDTY--IVSLILEASQALVQKSKDA 571 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHK 645 ++ +S + + + + EK +S++ Y L E EK LY I + E M Sbjct: 572 QYKVSIESLSRAFNLAEKVTHSVSVD----YSLFENNQEKALYQAI--LSLELTEDM--- 622 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 H D L ++ I FFD +V DD +++ NRL+LL Sbjct: 623 --HDNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALL 660 >gi|298528170|ref|ZP_07015574.1| glycyl-tRNA synthetase, beta subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511822|gb|EFI35724.1| glycyl-tRNA synthetase, beta subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 695 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 220/718 (30%), Positives = 353/718 (49%), Gaps = 68/718 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDF+LEI EE+PAR + D L L+ + + + +R + TP RL Y+ GLS Sbjct: 1 MPDFVLEIGFEEMPARFLKQITIDFRQSLDKELETQMLDHGQVRTWSTPRRLCAYVSGLS 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 K E GP V G KA GF RS + + + I++ K YLAV Sbjct: 61 EVQTSKEEIVTGPPVAVGLDEQGGYTKAGQGFARSQQVD-VQELMIQETEKG--RYLAVQ 117 Query: 114 RK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K D+L I A+ + +PK MRW F++ RP++ IL + Sbjct: 118 KKVGGAQTRDILPQICTEAVNSLGFPKKMRW------WDRFTFGRPIRWILAKM-----D 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 E++I+ + ++ ++TYGHR P P +V Y R + EEA V+LD + R++ I ++ Sbjct: 167 EQVINFQIADVKSADMTYGHRVLGPGPFRVDQAKDYFRIIREEAGVILDFQERKDIITSE 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A LA + ++VE++ L E L E+ +GSFD YL LP E++ +++++QK F Sbjct: 227 ASNLAREIQGKVVENEKLASENANLAEFPGPVLGSFDPGYLELPREVLLTSMESHQKSFG 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L F+ V N D I +G RV+ ARLEDA FW Sbjct: 287 VVDDEDRLLPSFVAVIN-NRPDSRGLIRKGWERVLKARLEDARFFW-------------- 331 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI-RVLGKKIAQLIDADVAL 410 N D + D+ M +L+ VVF A +G+ GE+ R+ R+ G +L AD Sbjct: 332 ------NSDKAASFDEWMQKLE--KVVFMAPLGSMGEKSRRLERISGFLCDRLQSADKKD 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V +A + KADL +E+V EF +LQG +G YA N + A+ EH P GP + P+ Sbjct: 384 VQKAAFICKADLVSEMVGEFADLQGIMGGIYASHAGYNDNVARAVYEHYLPLGPDSDTPS 443 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 VSLADK+D L+ + ++ P+G+ DPYALRR LG+IRII+++ + + + + I Sbjct: 444 TPEGALVSLADKMDNLVGCFGLDMLPTGAADPYALRRQALGVIRIIIKHGLRLDIEELIS 503 Query: 530 ------------ED-----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +D + L+ FF RLK Y + + L++A+L+ ++ Sbjct: 504 FTAKSYTGATWKQDPEQALEKLMQFFATRLKAYWQGQGFQGKLVDAVLQSGFSDIYAAQG 563 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL--EISPQYLLLEAEKRLYAV 630 + + EF E +L+ KR+ I+ ++ + +SL + P L + E +L Sbjct: 564 RLDAIREFSLDENFEAAVLTYKRVDNIIR-KQAGDAGVSLKQDYDPGLLQEDPEIKLDRA 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 I + ++ + + + L+++ ++ FFD V+V D ++R NRL LL ++ Sbjct: 623 IREIMNDWDTLWQNEDFSSLFNKLNALRPSVDDFFDHVMVMCQDEKLRQNRLGLLNFL 680 >gi|319897585|ref|YP_004135782.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae F3031] gi|317433091|emb|CBY81465.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae F3031] Length = 688 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 213/719 (29%), Positives = 350/719 (48%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLHLATQ 64 Query: 63 SPEKIEERLGPRV-----GAGK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 K E+ GP V G GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QLSKEIEKRGPAVSAAFDGEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++ +L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLANQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTVCVE----QAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIEQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADI 684 >gi|332358027|gb|EGJ35860.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1056] Length = 679 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 215/714 (30%), Positives = 361/714 (50%), Gaps = 88/714 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EVGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQSVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + E+Q +L FF R++ + DR I D++ ++L+ + + DL Sbjct: 502 LLGRLYELKFDSLSYENQEAVLDFFRARVE-KMMDRSIPKDIVTSVLQSTH---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS- 632 ++ A+ + F + + + ++ + EK + + ++P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLAAAIEK 615 Query: 633 -DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + ++D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTPDLAANLDQ---------LFALSPVIDAFFDHTMVMDEDEAVRNNRLALL 660 >gi|325697678|gb|EGD39563.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK160] Length = 679 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 216/718 (30%), Positives = 359/718 (50%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + + Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQFVITSPLERGDMTVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 SEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + E+Q +L FF R++ + DR I D++ ++L+ + + DL Sbjct: 502 LLGRLYELKFDSLSYENQEAVLDFFRARVE-KMMDRSIPKDIVTSVLQSTH---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + ++P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKTAVESLSRVFNLAEKAQGHAA--VNPALFENQEEKDLAAAIEA 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD ++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLAANL-------------DQLFALSPVIDAFFDHTMVMDEDEAVRNNRLALL 660 >gi|229552310|ref|ZP_04441035.1| glycine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539719|ref|YP_003174218.1| glycyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus Lc 705] gi|229314292|gb|EEN80265.1| glycine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151395|emb|CAR90367.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus Lc 705] Length = 689 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 207/730 (28%), Positives = 348/730 (47%), Gaps = 76/730 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L+EI E++PA + + + LK + + + +Y TP RL L + L+ Sbjct: 4 DYLIEIGLEDMPAHVVTPSINQFHDKTVAFLKANHLEHGQIDRYATPRRLALLVHDLAAK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + GP G KA GF RS G+ T D K VYL K Sbjct: 64 QADVETDVKGPAKKIAQDADGNWTKAAIGFSRSQGM-TPDDIVFKTIKGVDYVYLHKAIK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K E +L ++ V I+ + +P M+W F +IRP+ ++ +L + + Sbjct: 123 GKEAAE-ILPGMLDV-IKGLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDTV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + L ++ G +T GHRF P+ + + D Y+ L++ V+++P R+ I ++ Sbjct: 171 VPMKLLDVEAGRVTQGHRFLG-KPVTLPNADAYVAALKDQFVIVEPAARKQLIREQIEQI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ ++ D DLLEE+ LVEW F G+FD KYL +PE ++ ++K NQ+ F R + Sbjct: 230 ATDHQWQIELDSDLLEEVNNLVEWPTAFAGTFDPKYLAIPEAVLITSMKDNQRYFYARDQ 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G + N FI V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 290 AGKMVNAFIGVRNGN-HDHLNNVIAGNEKVLTARLEDAAFFYAEDQK------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 + + + + RL V FH KI + ++++R +V+ +A L + A +D Sbjct: 336 -------RSIAEDVERLKA--VSFHDKISSMYDKMARTKVIAALLADQFGLTADEKADLD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 387 RAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPIAADGALPQSL 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---- 528 + +++ADKLD+L++F+A++ PSGS DPYALRR GI+R+I E+ L+ Sbjct: 447 VGTVLAIADKLDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAEHDWPFALASLQPTI 506 Query: 529 ----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 Q L F DR K L + IRHD+++A+ + ++ I+D Sbjct: 507 AKALAEADQTNGLDFAAHQQELNDFMIDRAKQLLQGQKIRHDIVDAVTVRSDADIAGILD 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K L + + + + + + R+ +I + ++ + P E +L+ ++ Sbjct: 567 AAKLLTQHAADSDFKPVMGALGRVLRITG-----KQTVTTAVDPTKFENPTEGQLHDAVT 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 Y L ++ +PI+ +FD +V DD+ VR+NRL+ LQ + +I Sbjct: 622 TTAKTFAAEPTEADYQA----LKALAKPIDAYFDATMVMADDKAVRENRLATLQQLAQLI 677 Query: 693 LIVINVQKIV 702 +V +++ Sbjct: 678 RQFGDVSQVI 687 >gi|325688749|gb|EGD30758.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK115] Length = 679 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 216/718 (30%), Positives = 360/718 (50%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGVFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQFVITSPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEAEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 E L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AESKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRGIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + +++P + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQT--DVNPALFENQEEKDLAAAIEK 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD ++ D ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLAANL-------------DQFFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|78042751|ref|YP_359301.1| glycyl-tRNA synthetase subunit beta [Carboxydothermus hydrogenoformans Z-2901] gi|77994866|gb|ABB13765.1| glycyl-tRNA synthetase, beta subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 690 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 367/731 (50%), Gaps = 74/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+LLEI EEIPAR E++ LKE GV Y+ + TP R+ Y+KG+ P Sbjct: 2 DYLLEIGVEEIPARFIPGIIEEVKNKGEEFLKEFGVQYEALISEATPRRIVFYVKGVLPK 61 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EKI+E GP G +A+ GF RS G I ++ + G +Y+ +K Sbjct: 62 TEEKIQEVKGPAKKASYDSEGNPTRALLGFARSQG---IEPNEVIEKEVNGVIYVFARKK 118 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 ++++L I I+ + +PK MRW F +IRP++ ++ +L EK Sbjct: 119 TGGNPVDELLPEIARKLIKNLSFPKPMRWGDID-----FKFIRPIRWLVSLL-----DEK 168 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I L++ I I+ GHRF + + Y + E V++ R I HR Sbjct: 169 VIPLEIAGIKADRISRGHRFLGQKEVVLDRAADYFVAMRENYVIVSLNERIEMIRAQLHR 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ++ G+ + +D++LL E LVE+ V +G ++++L LP+E+I +K +Q+ F Sbjct: 229 ASAEEGVVVDQDEELLLENANLVEYPTVVIGEINREFLELPKEVIITPMKEHQRYFPLFK 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L + F+ V N + A I +G ++V+ ARL DA F++ D LK+ Sbjct: 289 NDGSLYHKFLAVRN-GGRENLAEIAEGYAKVLKARLYDARFFYRED---------LKKPL 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALV 411 +N L++ +VF K+GT ++V R++ L I + ++ D + Sbjct: 339 AAYNEKLTR-------------IVFQEKLGTVWDKVLRLKELVVAIGRELNCDDEVKSYA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL T +V EFPELQG +G++YA+ E +AI EH PR + V T+ Sbjct: 386 VRAAELSKADLATNMVYEFPELQGIMGRDYALKSGERKEVAEAIFEHYLPRFSGDIVATS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 ++ I +S A+K+D L F+A+ + P+GS DP+ LRR LG++R ++ENK L Sbjct: 446 EVGILLSCAEKIDNLTAFFALKQIPTGSADPFGLRRQALGLLRTLIENKRFFSLKKAFDA 505 Query: 526 ------------SQFIE-DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + F E + L+ F + R K +L + +D I+A+L D+ + Sbjct: 506 AFNLLPAEVREKANFAEVYEELLEFIYQRFKGFLLEEGFSYDTIDAVLATGKDDFYDLYL 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVI 631 ++ L + + R + + + + RE++ + LL E AEK L+A Sbjct: 566 RVRALENLRNHPSFTALTTTFTRAYNL--ARKGQGREVA-----ESLLYEPAEKELFAEF 618 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +++E + K Y + + + ++ P++ FF++VLV +D ++R+NRL LL I + Sbjct: 619 REISLNVKELLREKAYLKAMEEVAALANPLDRFFNEVLVMAEDEKIRENRLGLLGAIAGL 678 Query: 692 ILIVINVQKIV 702 +L + ++ KIV Sbjct: 679 VLEIADLSKIV 689 >gi|221310449|ref|ZP_03592296.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221314772|ref|ZP_03596577.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319695|ref|ZP_03600989.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. JH642] gi|221323972|ref|ZP_03605266.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. SMY] gi|255767576|ref|NP_390404.2| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|251757345|sp|P54381|SYGB_BACSU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225185204|emb|CAB14455.2| glycyl-tRNA synthetase (beta subunit) [Bacillus subtilis subsp. subtilis str. 168] Length = 679 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 209/716 (29%), Positives = 355/716 (49%), Gaps = 59/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++K ++ Sbjct: 5 DLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKDVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF + G + D IK+ KG Y+ V + Sbjct: 65 QDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQG-ANVEDLYIKE--VKGIEYVFVQKF 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 L + I + +PK+MRW +IRP+K I+ + + + Sbjct: 122 QAGQETKSLLPELSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALF-----GQDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + G T GHRF H + ++S Y L+ V+ DP R+ I + + Sbjct: 172 IPFSITNVESGRTTQGHRFLG-HEVSIESPSAYEEQLKGQHVIADPSVRKQMIQSQLETM 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F + + Sbjct: 231 AAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFPVKDK 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 291 NGDLLPHFITVRNGN-SHAIENVARGNEKVLRARLSDASFFYKEDQ-------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 K N+D + + +L+ ++VFH ++G+ ++V R+ + +K+A + AD + V Sbjct: 336 KLNIDAN------VKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDTLKHVK 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR P+ Sbjct: 388 RAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGETPSTF 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--- 529 V++ADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I + + Sbjct: 448 TGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEELLTFV 507 Query: 530 ---EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + + Sbjct: 508 QTDKENELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLGAP-- 565 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 F +A+ + ++++I +K R +I P E E +L+ ++QE+ K Sbjct: 566 -GFKETAEALGRVISISKKGVRG---DIQPDLFENEYEAKLFDAYQTAKQNLQENFSKKD 621 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 622 YEAALASLAALKEPIDAYFDHTMVIADNESLKANRLAQMVSLADEIKSFANMNALI 677 >gi|16272861|ref|NP_439084.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae Rd KW20] gi|260580013|ref|ZP_05847843.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae RdAW] gi|1174512|sp|P43822|SYGB_HAEIN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|1573946|gb|AAC22584.1| glycyl-tRNA synthetase, beta chain (glyS) [Haemophilus influenzae Rd KW20] gi|260093297|gb|EEW77230.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae RdAW] Length = 688 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 215/721 (29%), Positives = 347/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFYIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++ +L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKAGAAIGEINLTACVEP------AEKALAEAVLALRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|325499117|gb|EGC96976.1| glycyl-tRNA synthetase subunit beta [Escherichia fergusonii ECD227] Length = 689 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RI++E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRILVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|206579067|ref|YP_002236067.1| glycyl-tRNA synthetase, beta subunit [Klebsiella pneumoniae 342] gi|238064853|sp|B5XMY7|SYGB_KLEP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|206568125|gb|ACI09901.1| glycyl-tRNA synthetase, beta subunit [Klebsiella pneumoniae 342] Length = 689 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVANLAAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMIASSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + IP + GHRF + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLGVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA ++ +I + L AE +L + +Q Sbjct: 571 RTLEESSALAAANKRVSNILAKSDETLNDI---VHASVLKEAAEIKLAGNLVVLRDKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V ++ Sbjct: 628 YFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQVADI 685 >gi|70733526|ref|YP_257165.1| glycyl-tRNA synthetase subunit beta [Pseudomonas fluorescens Pf-5] gi|123776099|sp|Q4KKR8|SYGB_PSEF5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|68347825|gb|AAY95431.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas fluorescens Pf-5] Length = 684 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 217/721 (30%), Positives = 344/721 (47%), Gaps = 70/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + AE + L+ G+ +Q Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKALNTLAEAFLAGIEKGLQSAGLSFQAKHVYAAPRRLAVLITQLATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G++ +I + K ++ K Sbjct: 65 QPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGVEL---SEIDQSGPKLRYSQSIKGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P PK MRW+ ++RP + ++ +L +++ Sbjct: 122 P---TASLLPTIVEDSLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLL-----GDEV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID + G + GHRFH P +++ + +Y+ DL A VL D RR I L Sbjct: 169 IDCTILAQKAGRDSRGHRFHHPQSVRITAPANYLADLRAAYVLADANERRELISKRTAEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + DLL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ATLQEGTAIVPADLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDV 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I++GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-RQIIEGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FNL L +VVF K+G+ ++ RI L IA I D RA Sbjct: 339 DFNLRLQ-------------NVVFQEKLGSVYDKAERISKLAAFIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P+ Sbjct: 386 LLSKCDLATEMVGEFPEMQGIAGYYYALNDGEPEDVALALNEQYMPRGAGAELPSTVTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQ 527 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E K D+ L S Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKKFDLDLNDAVAFAVSA 505 Query: 528 F--------IEDQNLILFFHDRLKLYLHDR--DIRHDLIEAILRPENDNLLTIVDLIKHL 577 F + DQ ++ F DRL+ D D+ L L+P + L ++ + Sbjct: 506 FGSKVKAAGLADQ-VLEFIFDRLRARYEDEGVDVATYLSVRALKP--GSALDFDQRVQAV 562 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + KR+ +L+ K + I +Y E LY+ I Sbjct: 563 QAFRKLPEAAALAAVNKRVSNLLS---KIEGNVPTTIEAKYFDNANEFSLYSAIQQADQA 619 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q ++Y + L ++ EP++ FF+ V+VN +D +VR NR +LL ++ + L V + Sbjct: 620 VQPMAAARQYSETLARLAALREPVDAFFEAVMVNAEDAKVRANRYALLARLRGLFLGVAD 679 Query: 698 V 698 + Sbjct: 680 I 680 >gi|148543972|ref|YP_001271342.1| glycyl-tRNA synthetase subunit beta [Lactobacillus reuteri DSM 20016] gi|184153367|ref|YP_001841708.1| glycyl-tRNA synthetase subunit beta [Lactobacillus reuteri JCM 1112] gi|227364885|ref|ZP_03848931.1| glycine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|325682490|ref|ZP_08162007.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri MM4-1A] gi|166980040|sp|A5VJI1|SYGB_LACRD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229470700|sp|B2G6Z6|SYGB_LACRJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148531006|gb|ABQ83005.1| glycyl-tRNA synthetase beta chain [Lactobacillus reuteri DSM 20016] gi|183224711|dbj|BAG25228.1| glycyl-tRNA synthase beta subunit [Lactobacillus reuteri JCM 1112] gi|227070089|gb|EEI08466.1| glycine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|324978329|gb|EGC15279.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri MM4-1A] Length = 691 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 209/732 (28%), Positives = 370/732 (50%), Gaps = 80/732 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + LKE+ + + +++++ TP R+ L + GLS Sbjct: 5 YLLEVGVEEMPAHVVTPSIKQLHERVAKYLKEQRITFDDIQEFATPRRMALLIHGLSDKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G ++ D + K+ KG Y+ V + Sbjct: 65 PDIDESVKGPAKKIAQDADGNWTKAAIGFTRGQG-ASVEDIEFKE--VKGVEYVFVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +VL+ + P I + +P M+W + +IRP++ ++ +L +++ Sbjct: 122 AGKTVAEVLQGL-PAVITSMTFPTLMKWGYNN-----LQFIRPIRWLVSLL-----NDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ ++ G T GHRF HP+++ D Y L V+ D R+N I + ++ Sbjct: 171 VPFNILDVEAGRETQGHRFLG-HPVEIAKADDYEETLNNDFVIADQTKRKNLIKDQITKI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + ++ D+DLLEE+ LVEW F GSFD+KYL LP+ ++ ++K NQ+ F R Sbjct: 230 INENNWQVDWDEDLLEEVNNLVEWPTAFAGSFDEKYLALPDPVLITSMKDNQRFFCVRDG 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L + FI V N +D +++GN RV+ RLEDA F++ DQ Sbjct: 290 DGNLLSHFISVRN-GNTDYLDNVIKGNERVLVPRLEDAQFFYQEDQ-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADVALV 411 +D+ + RL V FH KI + +++ R+ VLGK++ L D ++A + Sbjct: 335 ------KLTIDEYVERLKK--VSFHDKISSMYDKMQRVAVIANVLGKQL-NLSDEELADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 386 DRAAHIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKDDVATAIREHYMPISAEGELPQT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + +PL Sbjct: 446 KIGAVLAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADRGWHLPLLSIQSE 505 Query: 526 -SQFIEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + E+ + + FF DR+K H + +RHD+I+A +++ I+ Sbjct: 506 IAPAFENAEINVSFDLNKNSDEVRSFFLDRIKQLFHGQKVRHDIIDAATDTRQNDIANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS-LEISPQYLLLEAEKRLYAV 630 + I+ +++ + F + + ++L I +K R +S L + P +E +++ Sbjct: 566 EAIQTIDD---HKDDDNFKEDIEALTRVLRIAKKDKRPVSELVVDPNLFENPSEAKMHTA 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +S+ Q+++ L ++ I +FD+ ++ + ++R+NRL+ L + + Sbjct: 623 VSELIKENQQTVSENFA-----ALRTLTPIISEYFDENMIMDKNEDIRNNRLAQLSILAH 677 Query: 691 IILIVINVQKIV 702 ++ N+ ++ Sbjct: 678 QASLIGNLDNLI 689 >gi|293556343|ref|ZP_06674924.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1039] gi|291601410|gb|EFF31681.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1039] Length = 691 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 218/734 (29%), Positives = 356/734 (48%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + + L L + + Y + + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDKNQLTYDTIETFSTPRRLAIKVTNIPER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA +GF+R GL T + I KG Y+ V + Sbjct: 64 QADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYVTKY 120 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL + V I+ + +P +M W+ F +IRP+ I+ +L ++ Sbjct: 121 THGKEAKEVLTGLADV-IKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A+ Sbjct: 170 IIPFEILDVKTDRASRGHRFLG-EDVTFAHAKEYEEKLNEQFVIASPQKRKEMIITQANE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F R Sbjct: 229 LAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEVRN 288 Query: 295 REGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G+L FI N ++ + G +GN +V+ ARLEDA F Sbjct: 289 DQGMLLPHFISARNGDRVKLENVG----RGNQKVLTARLEDAEFF--------------- 329 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +N D +DQ + +L V FH KIG+ E++ R++V+ + I + L D ++ Sbjct: 330 -----YNEDKKASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVRLSDEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T ++ EFPELQG +G++YA+L+ E + AI EH P ++ Sbjct: 383 MDLQRAAEIYKFDLVTNMIGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 443 PETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVL 502 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 503 QETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLT 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + + E F S + + +++ + +K E E+ P+ EAEK L+ Sbjct: 563 KVFAAAQLFKQHLAD---EDFKPSMEALTRVVNLAKKAELEKQSEVDPELFENEAEKELH 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 620 KAVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQI 675 Query: 689 KNIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 676 AAMALSLASLDQII 689 >gi|290890505|ref|ZP_06553580.1| hypothetical protein AWRIB429_0970 [Oenococcus oeni AWRIB429] gi|290479901|gb|EFD88550.1| hypothetical protein AWRIB429_0970 [Oenococcus oeni AWRIB429] Length = 689 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 226/745 (30%), Positives = 362/745 (48%), Gaps = 101/745 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D+LLEI EEIPA + ++ L + + + Y+ ++ + TP RL + + LS Sbjct: 1 MADYLLEIGLEEIPAHLVTESENQLIERIKNFFSDNLLDYKKIQTFSTPRRLAVLVHDLS 60 Query: 61 PHSPEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +S K EE GP + K +A +GF RS G + D + G VYL Sbjct: 61 NYSQSKDEELRGPSLKVAKDESGNWSRAAEGFARSQGT-----SPAEFDERDGYVYLN-- 113 Query: 114 RKPKRL----IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 K + E++LK I ++K+ + M+W+ ++RP++ ++ +L Sbjct: 114 ---KHIEGVSAEEILKKIGIEVVEKMKFSTYMKWADFK-----LEYVRPIRWLVSLL--- 162 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 KI+ + ++ T GHRF + I + Y L A V++D + R+N+I Sbjct: 163 --DSKIVPFQILDVKADRFTRGHRFLSGGKISISEAGDYEETLNNAYVIVDAKVRKNSIR 220 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 N ++A L D DLLEE+ +VE+ F G FD KYL LPE ++ +++ NQ+ Sbjct: 221 NQIRKIADTNDWNLHVDPDLLEEVNNIVEYPTAFAGVFDDKYLNLPEIVLTTSMRDNQRF 280 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F ++G + FI V N S+ +V+GN +V+ ARLEDA F++ DQ Sbjct: 281 FYVTNKQGKILPHFISVRN-GDSNQIENVVKGNEKVLVARLEDAEFFFEEDQ-------- 331 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K N+D +R+ VFH KIGT E + R+ +KIA L+ +A Sbjct: 332 ------KHNIDFFMKKAERL--------VFHEKIGTMTEHMKRV----EKIAALLANQLA 373 Query: 410 LVD-------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D RA + K DL T +V EF ELQG + YA + EN + C A+ E P Sbjct: 374 FNDQEKKDLKRAANIYKFDLTTAMVGEFAELQGTMAGIYAKIFGENQTVCQALSEQYLPT 433 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 ++P +K+ ++LADKLDTL +F+A PSGS DPY LRRA LGI+RII + K + Sbjct: 434 SSEGDLPKSKVGAMLALADKLDTLFSFFAAGIIPSGSNDPYGLRRAALGIVRIIGQQKWN 493 Query: 523 IPLSQFI----------ED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAI 559 +S+ + ED + +I FF DR++ DIR+DL++A Sbjct: 494 FSVSKLLHSLKTAVDKHEDGFLIDFADTKEISRKVIEFFLDRIR--QQSSDIRYDLLDAS 551 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKF--LLSAKRIFQILAIEEKKNREISLEISPQ 617 N+ ++ + K + S F ++ A Q LA + K N +EI P+ Sbjct: 552 TGKVNEGIINYI--FKRVRILASHVADPDFRDVIEALTRVQNLAEKNKSN----VEIDPE 605 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + +EKRLY + D + S K H + L S+ EPI +FD+ ++ + + Sbjct: 606 LFVTNSEKRLYQLTKDKDPIVLLS---KGDHTVYQFLASLKEPINNYFDENMIMDKNPII 662 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 ++NR++ + + N+I + +++K+V Sbjct: 663 KNNRVAQINLLNNLISSLGDLRKVV 687 >gi|76787186|ref|YP_328994.1| glycyl-tRNA synthetase subunit beta [Streptococcus agalactiae A909] gi|77404951|ref|ZP_00782052.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] gi|77410621|ref|ZP_00786981.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae CJB111] gi|123758113|sp|Q3K3A9|SYGB_STRA1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|76562243|gb|ABA44827.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae A909] gi|77163336|gb|EAO74287.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae CJB111] gi|77176390|gb|EAO79158.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] Length = 679 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 215/700 (30%), Positives = 359/700 (51%), Gaps = 82/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL ++ D + ++ + VY+ K I DVL + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGL-SVDDIEFREVKGEEYVYVTKHETGKSAI-DVLAS 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I G Sbjct: 133 VTEV-LTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + D Sbjct: 182 RISRGHRFLGS-DTEISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL-DLSKPL 365 N A + +++GN +V+ ARLED FW+ DQ K N+ DL + L Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQ--------------KLNIADLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 Q V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 346 KQ---------VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE-FFSSAKGE 587 + ++ F R++ + + + D+ EA+L E+D IV LI ++ +K Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVL--ESDTY--IVSLILEASQALVQKSKDA 571 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHK 645 ++ +S + + + + EK + ++ S L E EK LY I + E M Sbjct: 572 QYKVSVESLSRAFNLAEKVTHSVLVDSS----LFENNQEKALYQAI--LSLELTEDM--- 622 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 H D L ++ I FFD +V DD +++ NRL+LL Sbjct: 623 --HDNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALL 660 >gi|227485433|ref|ZP_03915749.1| glycine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227236563|gb|EEI86578.1| glycine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 687 Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 218/735 (29%), Positives = 370/735 (50%), Gaps = 82/735 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ L LL E + Y+++ TP R + LK ++ Sbjct: 1 MHNYLLEIGVEEIPSDYVKNTKIQLKEKFEKLLSENKLSYEDVEIESTPRRFMVLLKNVA 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +++ GP +A+ GFL+ + +SD IK+ +KG+ Y+ V Sbjct: 61 ETAQQEVISVRGPSAKIAYDEDNNPSRALLGFLKGQKAE-LSDVIIKE--QKGEDYVFVE 117 Query: 114 RKPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K K + +E++LK V ++ + +P+SMRW + W RP++ + +L Sbjct: 118 KKEKSKSLEEILKENVYEIVKSISFPRSMRWGG-----KSIRWARPIRWFVSLL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K++D D + I GNIT GHR I ++++ Y L+E V+L + RR+ IL Sbjct: 168 DKVLDFDAEGIEVGNITKGHRTLGSDKIVIENISEYEAKLKENYVILRGKDRRDIILKGL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + ++S VG E ++D+DLL+E++ +VE+ V +G D YL LP E+I +K +Q+ F Sbjct: 228 NSVSSQVGGEYMKDEDLLDEVVNIVEYPTVLVGEIDHSYLELPREVITTPMKDHQRYFPI 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + L F LV N + +++GN +V+ ARLEDA F+ Sbjct: 288 LDDKKKLLPYFCLVRNGDDYES-QNVIEGNKKVLVARLEDAKFFY--------------- 331 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLIDADVA 409 +LD + L+ + LD L VF +G G++ R+ L +K L D Sbjct: 332 -----DLDAANTLESYVKDLDNL--VFFEGLGNMGQKTKRLVELATSYQKELSLGDDIAE 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSKADL T +V EF ELQG +G YA+ EN AI+E P+ P Sbjct: 385 DAKRAAYLSKADLVTRMVVEFTELQGTMGAIYALNSGENQRVATAIKEQYLPKNQNSETP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + I +++ADK+D+++ +AI +GS+DP+ LRRA LGII IILEN ID+ + + I Sbjct: 445 KSVVGILLAIADKMDSIVGLYAIENYVTGSRDPFGLRRAALGIINIILENGIDVDIKKLI 504 Query: 530 EDQNLIL-------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + L+ F DRLK L D R+D++ +++ N+L + Sbjct: 505 AEALLVYTEINALAFDYDKTMDETLTFIKDRLKNKLLDDGYRYDIVNSVINTNFTNILKM 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + +K +++F + + L RI + +E ++REI ++ L + E++ Y Sbjct: 565 SEKVKAVSDFI--GENDDSLSYLIRINNL--TKESEDREIREDL----LETDLERKFYEE 616 Query: 631 IS---DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 I+ +FG + S D+K+ + + + + D ++NVD+ EV++NRL++L Sbjct: 617 ITKLENFG--LVSSADYKKELEN---IQATSLVGNDYLDNTMINVDNEEVKNNRLAMLNL 671 Query: 688 IKNIILIVINVQKIV 702 +K + + ++ +IV Sbjct: 672 LKRRMAKIFDISEIV 686 >gi|311069126|ref|YP_003974049.1| glycyl-tRNA synthetase subunit beta [Bacillus atrophaeus 1942] gi|310869643|gb|ADP33118.1| glycyl-tRNA synthetase subunit beta [Bacillus atrophaeus 1942] Length = 679 Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 214/717 (29%), Positives = 357/717 (49%), Gaps = 61/717 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR H++ L L L E + + ++ + TP RL + +K ++ Sbjct: 5 DLLLEIGLEEMPARFMHESMVQLGEKLGNWLTERNIAHGEVKLFNTPRRLAVLVKDVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF + G + D IK KG Y+ V + Sbjct: 65 QADIKEEAKGPAKKIALDSDGNWTKAAIGFSKGQG-AGVEDLYIKD--VKGTEYVFVQKF 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 L + I + +PK+MRW +IRP+K I+ + + + Sbjct: 122 QAGQDTKTLLPEIEGLITSLHFPKNMRWGN-----EDLRYIRPIKWIVALF-----GQDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + G++T GHRF H + +++ Y L+E V+ DP+ R++ I + + Sbjct: 172 IPFSITNVQSGHMTKGHRFLG-HEVSIEAPSAYEEKLKEQHVIADPDIRKSMIQHQLESI 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + D+DLL E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F + + Sbjct: 231 AAEKNWNIPVDEDLLNEVNHLVEYPTALYGSFEPEFLSIPEEVLVTTMKEHQRYFPVKDQ 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ V N S + +GN +V+ ARL DA F+K DQ Sbjct: 291 NGDLLPYFVTVRNGN-SHAIENVARGNEKVLRARLSDASFFYKEDQ-------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 K N++ + + +L+ ++VFH ++G+ ++V R+ + +K+A + AD L+ Sbjct: 336 KLNIN------ENVKKLE--NIVFHEELGSLADKVRRVTTIAEKLADQLKADEETKKLIT 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +SK DL T ++ EFPELQG +G++YA + E + A+ EH PR P+ Sbjct: 388 RAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEEEAVAIAVNEHYMPRAAGGETPSTF 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--- 529 V+LADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I Q + Sbjct: 448 TGAVVALADKLDTITSFFSIGVIPTGSQDPYGLRRQASGIVSILLDQNWGISFEQLLTFV 507 Query: 530 -EDQN--LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK-HLNEFFSSAK 585 D+N L+ FF RLK ++ IRHD+I+A+L ++ L L K H+ E A Sbjct: 508 KTDKNSELLDFFTQRLKYVMNAEQIRHDVIDAVL--DSSELEPYSALHKAHVLEKKLGAP 565 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G F +A+ + ++++I +K I P E E +LY + + +S + K Sbjct: 566 G--FKETAEALGRVISISKKGEHG---NIQPGLFENEQEAKLYDAYKEAKRDLHDSFNKK 620 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EPIE +F+ +V+ D+ ++ NRL+ + + + I N+ ++ Sbjct: 621 DYEAALTALAALKEPIEEYFNHTMVHADNETLKANRLAQMINLADEIKSFANMNALI 677 >gi|332366390|gb|EGJ44141.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK355] Length = 679 Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 217/711 (30%), Positives = 361/711 (50%), Gaps = 82/711 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLSFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLGKE-TEIVSADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNL-DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD-VAL 410 K + DL + L+ +V FH KIG+ E + R + +AQ +DAD A Sbjct: 335 -KLAIADLVEKLN---------NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q + Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 530 ------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++Q +L FF R++ + DR I D++ A+L+ + + DL++ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRSIPKDIVTAVLQSTH---FVVRDLVET 560 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS--DF 634 A+ F + + + ++ + EK + + ++P + EK L A I + Sbjct: 561 AALLAEKAQEANFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLAAAIEAVEL 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + ++D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 619 TADLAANLDQ---------LFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|77918213|ref|YP_356028.1| glycyl-tRNA synthetase subunit beta [Pelobacter carbinolicus DSM 2380] gi|123743123|sp|Q3A8N5|SYGB_PELCD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|77544296|gb|ABA87858.1| glycyl-tRNA synthetase beta chain [Pelobacter carbinolicus DSM 2380] Length = 688 Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 209/727 (28%), Positives = 348/727 (47%), Gaps = 72/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LEI +EEIPA A DL ++ L+ + ++ +R + TP RL L + G++ Sbjct: 4 ELFLEIGTEEIPAGFLPTAMADLERLIRKELETGRIGFETVRTFATPRRLVLAVTGVASG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + GP V G KA GF RS G++ +SD + +++ KG+ Sbjct: 64 QARQEVTASGPSVSVAFDADGNPTKAALGFARSNGVE-VSDLE-RRETDKGEYLFVSKVV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R ++L ++P I +P+ KSMRW + RP+ I+ + ++ Sbjct: 122 EGRPTGELLPEMLPRIIAAIPFKKSMRWKDLD-----IRFARPMHWIVALF-----DGQV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + GN++YGHRF AP +V SL+ Y+ + E+ V++DP RR I + + Sbjct: 172 VPFSYGNLTSGNLSYGHRFMAPDAFEVSSLEQYLVEAEKHFVIVDPVKRRQIISDQLAEV 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G +L D DLL+E+ LVE+ MG F+ YL LP EL+ ++ +Q+ F Sbjct: 232 VGRCGGKLNPDDDLLDEVAFLVEYPAAVMGGFEDSYLQLPPELLITVMREHQRYFTVVDD 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI +SN +A D + QGN RV+ ARL DA+ FW D+ Sbjct: 292 SGKLLPRFITISNTRAED-LTVVQQGNERVLRARLSDAMFFWNEDR-------------- 336 Query: 356 KFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIA-QLIDADVALVDR 413 K L+ +RLD L +VV+ AK+GT E+V R + L ++A Q + V L +R Sbjct: 337 KVKLE---------SRLDALKNVVYQAKLGTSYEKVMRFKTLAVELAQQQVPEVVELTER 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+K DL T +V EF ELQG +G+EYA+L E+ AI EH P +P + + Sbjct: 388 AASLAKCDLETGMVFEFTELQGVMGREYALLDGEDPRVARAIFEHYLPVQAGGELPGDDV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 VS+ADK+D++ + + P+G+ DP+ALRR+ +GI+ IIL+ + L +E Sbjct: 448 GAFVSIADKIDSICGCFGVGLIPTGTADPFALRRSAIGILNIILDRGYRLSLPALVERSL 507 Query: 533 ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ F R L + + +D+++A+L ++ + + +K Sbjct: 508 GLLADKLTRPATEVAADVLEFLRLRFFNMLTAQGLPNDVVDAVLSAAFEDPVDALQRVKG 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA--EKRLYAVISDF 634 L F + E ++ KR+ I+ + ++ S L EA E L+ + + Sbjct: 568 LASFREEGEFEALAVTFKRVVNIV--------KGGVDTSVDSALFEADCEAGLFDALQNV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + Y + + P++ F+ V+V D V+ NRL+LL + + Sbjct: 620 TGRFEQFVAEGAYLDALRTVGGLRSPVDALFEGVMVMSPDEAVKTNRLALLTAVARLFQG 679 Query: 695 VINVQKI 701 + + KI Sbjct: 680 IADFSKI 686 >gi|126643134|ref|YP_001086118.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii ATCC 17978] Length = 595 Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 180/595 (30%), Positives = 313/595 (52%), Gaps = 53/595 (8%) Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 ++ +L I+ A+ +P K MR + + + ++RP+K + +L+ +D ++I+ Sbjct: 33 LDALLPQILQTALDNLPIAKRMRSAASRT-----EFVRPVKWV--VLLKDD---QVIEAT 82 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA V Sbjct: 83 IQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLADEV 142 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG L Sbjct: 143 NATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEGKL 202 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 203 QPYFITVSNIESKDS-TQIIEGNEKVVRPRLSDAEFFFLQDQK----------------- 244 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L+K Sbjct: 245 ---QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALLAK 299 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T++L Sbjct: 300 CDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTIAL 359 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 AD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + + Sbjct: 360 ADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYGDI 419 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + + F R + D+ + D+++A+ + L + +N F + Sbjct: 420 VKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFRTL 479 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ ILA E + +E + L+ +AEK L+A + ++ + Sbjct: 480 PEAAALAAANKRVANILAKEAAPEGSV-IEAN---LVEDAEKALFAELQAVTPVVEPLLA 535 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 536 AKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADV 590 >gi|320326674|gb|EFW82719.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. B076] gi|320331351|gb|EFW87294.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 684 Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 211/716 (29%), Positives = 334/716 (46%), Gaps = 60/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K +L KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKPT 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 124 K---SLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELAT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F EG Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A IV GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKDP-AQIVTGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPE+QG G YA E A+ E PRG +PT V Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 ++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFG 507 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 508 AKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRK 567 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 568 LPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMA 624 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 625 AERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|148826424|ref|YP_001291177.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittEE] gi|229845983|ref|ZP_04466095.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 7P49H1] gi|166227914|sp|A5UDE3|SYGB_HAEIE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148716584|gb|ABQ98794.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittEE] gi|229810987|gb|EEP46704.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 7P49H1] gi|309973574|gb|ADO96775.1| Glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae R2846] Length = 688 Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 214/721 (29%), Positives = 350/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELIQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHCAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++N++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFSDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA + EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP------AEKALAEAVLVLRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGDYTAVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|327467244|gb|EGF12748.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK330] Length = 679 Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 216/718 (30%), Positives = 359/718 (50%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLGKE-TEISSADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ F+ R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFIVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+ Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAH 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYDNQEAVLDFFRARVE-KMMDRSIPKDIVTAVLQDTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + + I+ + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--INSALFENQEEKDLAAAIEA 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD ++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLAANL-------------DQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|260599858|ref|YP_003212429.1| glycyl-tRNA synthetase subunit beta [Cronobacter turicensis z3032] gi|260219035|emb|CBA34390.1| Glycyl-tRNA synthetase beta subunit [Cronobacter turicensis z3032] Length = 689 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 214/724 (29%), Positives = 340/724 (46%), Gaps = 73/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDAAGLTHGVVSWFAAPRRLALKVASLAASQ 65 Query: 64 PEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP V A KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 PDREVEKRGPAVSAAFDAEGNPSKAAEGWARGCGITVDQAERLVTDKGEWLMYRAHVKGE 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW S ++RP+ ++ +L ++++ Sbjct: 126 S--AQALLPNMVSTALSKLPIPKLMRWGA-----SDVQFVRPVHTVTLLL-----DDEVL 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + D Y + L E V+ D R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYNARKAKIQQDAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AAKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYGT 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESRDPHQ-IISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGTLRDKTDRIQALSGWIANQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVAVALNEQYMPRFAGDALPSSLVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG +RII+E + + L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPEN-DNLLTIVDLI 574 +++ F R + + D D I+A+L RP + D + V Sbjct: 511 YGSKLTNAKVVDDVVDFMLGRFRAWYQDEGYSVDTIQAVLANRPTRPADFDARMKAVSHF 570 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+E + A KR+ ILA K N ++ E+ L + E RL ++ Sbjct: 571 RTLDEAVALAAAN------KRVSNILA---KANEPLNDEVHASVLKEDPEIRLALQVAVM 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +Q RY + L + EP++ FF++V+VN DD +VR NRL+LL ++ + L Sbjct: 622 RDKLQPLFAEGRYQEALVELAQLREPVDEFFEKVMVNADDAQVRINRLTLLSKLRELFLQ 681 Query: 695 VINV 698 V ++ Sbjct: 682 VADI 685 >gi|59710623|ref|YP_203399.1| glycyl-tRNA synthetase subunit beta [Vibrio fischeri ES114] gi|81311051|sp|Q5E8Y5|SYGB_VIBF1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|59478724|gb|AAW84511.1| glycyl-tRNA synthetase, beta subunit [Vibrio fischeri ES114] Length = 688 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 213/719 (29%), Positives = 345/719 (47%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + +Q ++ Y TP RL L + L+ Sbjct: 4 NFLIELGTEELPPTALRSLAEAFASNFEAELKAADLAHQGVKWYATPRRLALKVAELAES 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G+ ++K D KG+ L Sbjct: 64 QADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVEQADRLKTD--KGEWLLHKEEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++++ A+ +P PK+MRW S +IRP+K++ +L +++ Sbjct: 122 KGKPVQELVVDFAAKALAGLPIPKAMRWGN-----SDIQFIRPVKTLTILL-----GDEL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ + + GHRF + S D Y LEE V+ D + R+ IL D+ + Sbjct: 172 IEGSILGVSSARTLRGHRFMGESEFTIDSADQYPAILEERGKVMADYDARKAIILADSEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGKADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIGADVEKSQRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPSTDIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADKLDTL+ + I + P GS DP+ALRRA LG++RII+E + ++ L + Sbjct: 449 SAVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKEYNLDLVDLVAKAQS 507 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDKLSNANVATDVIDFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDKRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRELDAAESLAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEKVEILAEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 625 PVFAAGNYQEALSRLAELREPVDAFFDNVMVMADDEALKTNRLTLLNKLRNLFLDIADI 683 >gi|269137370|ref|YP_003294070.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda EIB202] gi|267983030|gb|ACY82859.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda EIB202] gi|304557471|gb|ADM40135.1| Glycyl-tRNA synthetase beta chain [Edwardsiella tarda FL6-60] Length = 689 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 211/724 (29%), Positives = 345/724 (47%), Gaps = 73/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + A+ + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAQAFADNFRTELDNAGLAHGDIEWFAAPRRLALKVAALNAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D + +Y A L+K Sbjct: 66 PDREIEKRGPAIAQAFDADGKPTKAAEGWARGCGISVDQADRLSTDKGEWLLYRA-LQKG 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +R +D+L T V A+ ++P PK MRW + + ++RP+ ++ +L +E I+ Sbjct: 125 QR-AQDLLPTRVANALSRLPIPKLMRWGDSDT-----QFVRPVHTVTLLLGSESIPATIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +P + GHRF + S D Y + L E V+ D + R+ I DA Sbjct: 179 G-----VPSDRVIRGHRFMGEAEFTIDSADQYPQILLERGKVIADYDARKALIKRDAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AARIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 G L FI V+NI + D I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 AGKLLPNFIFVANIDSKDA-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++G+ ++ RI L IAQ I ADV + Sbjct: 352 --------------------------VLFQQQLGSLRDKTDRITALAGWIAQQIGADVNM 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E PR + +PT Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEADEVAVALNEQYMPRFAGDALPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RI++E K+ + L + Sbjct: 446 SLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIVVEKKLPLDLLTLTQ 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + + D I+A+L ++ Sbjct: 506 EAVRLYGDKLSNANVVDDVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTRPADFDARVR 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDF 634 ++ F + + + KR+ ILA K+ ++ E LL E AE RL A + Sbjct: 566 AVSHFRTLPEAATLAAANKRVSNILA----KSGDVLAEQVQAVLLKEPAEIRLAANLITL 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + RY + L ++ +P++ FF+QV+V DD +VR NRL+LL ++++ L Sbjct: 622 QEKLAPLFADGRYQEALVELATLRQPVDDFFEQVMVMADDEQVRINRLTLLNKLRDLFLQ 681 Query: 695 VINV 698 V ++ Sbjct: 682 VADI 685 >gi|88860611|ref|ZP_01135248.1| glycyl-tRNA synthetase beta subunit [Pseudoalteromonas tunicata D2] gi|88817206|gb|EAR27024.1| glycyl-tRNA synthetase beta subunit [Pseudoalteromonas tunicata D2] Length = 689 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 347/718 (48%), Gaps = 60/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + AE L L + Y++ Y +P RL + + GL Sbjct: 5 NLLIEIGTEELPPKSLRTLAEALLQNFCDELATLELSYESASWYASPRRLGVKVFGLINA 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP + A KA G+ R G++ +++ D KG L V + Sbjct: 65 QQDKEVEKRGPALQAAFDAEGNPTKAAIGWARGCGIEVDQAERLETD--KGAWLLHVAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +E ++ + A+ K+P K MRW + +IRP+ ++ + Sbjct: 123 AGQAVESLIPDALSNALTKLPIAKPMRWGAYKT-----QFIRPVHTVTVFY-----GPSL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + N GHRFH P I++ D LE+A V+ D E R+ I L Sbjct: 173 VEGTILGKAISNQLQGHRFHHPARIEINHADEAFAALEKAYVVADYEARKALIKGQIEAL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + D+ LLEE+ LVEW +F++ +L +P E + T+K +QK F + Sbjct: 233 AAEHNAIVAMDESLLEEVTSLVEWPVTLTATFEESFLSVPSEALIFTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N F+ VSNI+ S A ++ GN +VV RL DA F Sbjct: 293 DGNLLNKFLFVSNIE-SKNPAQVISGNEKVVRPRLADAQFF------------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F D K L+ R+A L+ V+F ++GT ++ RI L IA+ + A V RA Sbjct: 333 -FETDKKKTLESRLASLET--VLFQKELGTLKDKSERIAELSGFIAEKLGASVVDATRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EF ++QG +G YA E + A E PR + +P++ IS Sbjct: 390 LLSKTDLMTEMVMEFTDVQGIMGMHYARHDGETEAVALAQNEQYMPRFSGDALPSSLISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI--------PLSQ 527 +V+LADK D+L+ + I + P G KDP+ALRRA +G +RII+E ++++ ++ Sbjct: 450 SVALADKFDSLVGIFGIGQAPKGDKDPFALRRAAIGALRIIVEKELNLDALDIINKAMTL 509 Query: 528 FIED-------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F E +++ F R + + D+ I D+I+A+L L +K ++ F Sbjct: 510 FGEKLSNPNVAEDVFEFLLGRFRAWYQDQGIEVDIIQAVLARRPSQPLDFDRRVKAVSHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + + KR+ ILA + K E +++ L+ EAEK L A + + + Sbjct: 570 RSLEQAAALAAANKRVANILAKNDFKAAE---QVNENLLVEEAEKELAAQVKRYQAELAP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y + + L +I EP++ FFD V+V +D ++ NR +LL ++++ L V ++ Sbjct: 627 VIAAGDYQSVLEKLAAIREPVDTFFDNVMVMAEDEAIKQNRFTLLNELRSLFLQVADI 684 >gi|89092284|ref|ZP_01165238.1| glycyl-tRNA synthetase beta subunit [Oceanospirillum sp. MED92] gi|89083372|gb|EAR62590.1| glycyl-tRNA synthetase beta subunit [Oceanospirillum sp. MED92] Length = 682 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 207/715 (28%), Positives = 359/715 (50%), Gaps = 60/715 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + ++ + + LKE GV + +++ Y +P RL + + L Sbjct: 5 DFLVELGTEELPPKALKTLSDAFTSGITAGLKEAGVNFGDVKSYASPRRLAVLISALDDK 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 ++ E+ GP V A +KA++GF RS G+ TI + K D KG+ Y + + Sbjct: 65 QADREIEKRGPSVKAPEKAVEGFARSCGV-TIDQLE-KIDTNKGEYYNFKNTEEGKATSS 122 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L +V ++ K+P PK MRW S ++RP+ ++ + ++++D ++ Sbjct: 123 LLPELVETSLNKLPIPKRMRWGA-----SRVEFVRPVHWLVMLF-----GDEVVDCEILG 172 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGL 241 + G T GHRFH I++ + Y LE MV+ D + R+ A++N+ + A L Sbjct: 173 LTSGRKTRGHRFHYNQEIELIAPSEYADRLENPGMVIADYDIRK-AMINEQVK-AEGDKL 230 Query: 242 ELVE--DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 V D+DLL+E+ L EW G F++++L +P + + ++K +QK F G L Sbjct: 231 NAVAQIDEDLLDEVTALNEWPVALTGRFEERFLEVPAQALISSMKEHQKYFHHLDANGNL 290 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 F + NI + D +++GN +V+ RL DA F++ D+ Sbjct: 291 LPNFTTICNIVSKDP-QQVIEGNEKVIRPRLSDAAFFFETDKKTT--------------- 334 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L+ R+ +L +VF +GT ++ +RI L KIA ++ D A +RA +L K Sbjct: 335 -----LESRVEKLKT--IVFQKDLGTVYDKAARISALSGKIAATLNQDQAKAERAGLLCK 387 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T++V EF +LQG +G YA+ E+ A E PR + +P + V++ Sbjct: 388 TDLLTDMVYEFTDLQGLMGYHYALNDGEDQDVALAQNEQYMPRFAGDELPQTAPGVAVAI 447 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----------------ENKIDI 523 AD+LDTL + IN+ P+GSKDP+ALRRA LG++RII+ N D+ Sbjct: 448 ADRLDTLTGLFGINQPPTGSKDPFALRRAALGVLRIIVERELDLDLRELLTIAANNHNDL 507 Query: 524 PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 P + +ED+ ++ F +R + + D DI ++ ++L + L +K +N F S Sbjct: 508 PAREGLEDK-VLDFMLERFRAWYEDADINAEVFLSVLALKPSRPLDFDRRVKAVNHFRSL 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 A+ E + KR+ IL+ K+ + +++ + L AEK L A I + Sbjct: 567 AEAEALAAANKRVSNILS---KQGVTGTTDVNNELLTEAAEKALAADIEAQKAALAPLFA 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + + L + + FF+ V+V +D V++NRL+LL ++ + L V ++ Sbjct: 624 EGKYQEALESLAGLRASTDAFFEDVMVMAEDEAVKNNRLALLSQLRALFLGVADI 678 >gi|170718076|ref|YP_001785112.1| glycyl-tRNA synthetase subunit beta [Haemophilus somnus 2336] gi|189082269|sp|B0UWA9|SYGB_HAES2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|168826205|gb|ACA31576.1| glycyl-tRNA synthetase, beta subunit [Haemophilus somnus 2336] Length = 688 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 209/720 (29%), Positives = 350/720 (48%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEQELNQAGLAFEKVEWFAAPRRLAVKVLGLAEA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKQVEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ A+ +P PK+MRW ++RP+ ++ + A+ Sbjct: 125 QPTK---NLLVGIIDKALAGLPIPKTMRWGDKTE-----QFVRPVHTVTLLFGAD----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ + G GHRF + D Y + L+E V+ D R+ IL + Sbjct: 172 LIEGEILGVASGRTVRGHRFLGEREFSLDHADQYPQLLKERGSVVADFNERKALILATSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G +++LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEELLEEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D + I++GN +VV RL DA F Sbjct: 292 DKDGKLLPHFIFVSNINPDDP-SKIIEGNEKVVRPRLTDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F DL + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD R Sbjct: 334 ---FKTDLKQKLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADQTKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEDVAVALNEQYMPRFAGDTLPNSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 + +V+LADK+DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 449 ACSVALADKIDTLTGIFGIGQSPKGSADPFALRRAALGCLRIIVEKNLPLDLVDIVAKAT 508 Query: 534 LIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + F R + + I D+I+++L ++ ++ Sbjct: 509 ALFGDKLTNKNVVDEVVDFMLGRFRAWYESEGIAVDVIQSVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA + EI L + + AEK L + + Sbjct: 569 HFRTLDSAEALAAANKRVSNILAKADIAIGEIDLGVCVE----SAEKTLAEAVIALKGEV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + Y + D L ++ +PI+ FFD V+VNV+++ +R NRL++L ++N+ L V ++ Sbjct: 625 QPLIAQGDYTAVLDKLANLRQPIDAFFDGVMVNVEEQTLRQNRLAILSTLQNLFLQVADI 684 >gi|271498623|ref|YP_003331648.1| glycyl-tRNA synthetase subunit beta [Dickeya dadantii Ech586] gi|270342178|gb|ACZ74943.1| glycyl-tRNA synthetase, beta subunit [Dickeya dadantii Ech586] Length = 689 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 334/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ YQ++ + P RL L + GLS Sbjct: 6 FLVEIGTEELPPKALRTLAESFAAHFTAELDAAGLGYQSVDWFAAPRRLALKVVGLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAAGNPTKAAEGWARGCGITVSQAERLTTD--KGEWLLFRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L E ++ Sbjct: 124 GEAAQTLLPGMVSTALAKLPIPKLMRWGDNDT-----QFVRPVHTVTLLLGDELIPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D G GHRF + + D Y + L E VL D + R+ I DA Sbjct: 179 GID-----SGRTLRGHRFMGEPEFTIDNADQYPQILLERGKVLADYDARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 ADKLLPNFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLAT--VLFQQQLGTLRDKTDRIAALTGWVAGQIGADVEHAKRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSSAVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KR+ ILA K ++ + L + E +L ++ + + Sbjct: 571 RTLEQAEALAAANKRVSNILA---KSTETLNDSVQAALLKEKEEIQLATYVTALTSKLAP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + E ++ FFD+V+VN DD +VR NRL+LL ++N+ L V ++ Sbjct: 628 WFAEGRYQEALAELAQLRESVDNFFDKVMVNADDAQVRINRLTLLNELRNLFLKVADI 685 >gi|238917996|ref|YP_002931510.1| glycyl-tRNA synthetase subunit beta [Edwardsiella ictaluri 93-146] gi|259511924|sp|C5B995|SYGB_EDWI9 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238867564|gb|ACR67275.1| glycyl-tRNA synthetase, beta subunit, putative [Edwardsiella ictaluri 93-146] Length = 689 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 211/724 (29%), Positives = 345/724 (47%), Gaps = 73/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + A+ + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAQAFADNFRTELDNAGLAHGDIEWFAAPRRLALKVAALNAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D + +Y A L+K Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPTKAAEGWARGCGISVDQAERLSTDKGEWLLYRA-LQKG 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +R +D+L +V A+ ++P PK MRW + + ++RP+ ++ +L +E I+ Sbjct: 125 QR-AQDLLPALVASALSRLPIPKLMRWGDSDT-----QFVRPVHTVTLLLGSESIPATIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +P + GHRF + S D Y + L E V+ D + R+ I DA Sbjct: 179 G-----VPSDRVIRGHRFMGEAEFTLDSADQYPQILLERGKVIADYDARKALIKRDAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AARIGGVADLSDSLLEEVTSLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 G L FI V+NI + D I+ GN +VV RL DA F+K D ++NLP L S Sbjct: 294 AGKLLPNFIFVANIDSKDA-QQIIAGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLES- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++G+ ++ RI L IAQ I ADV + Sbjct: 352 --------------------------VLFQQQLGSLRDKTDRITALAGWIAQQIGADVNM 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E PR + +PT Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDALPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RI++E K+ + L + Sbjct: 446 SLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIVVEKKLPLDLLTLTQ 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + + D I+A+L ++ Sbjct: 506 EAVRLYGDKLGNASVVDDVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTRPADFDARVR 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDF 634 ++ F + + + KR+ ILA K+ ++ E LL E AE RL A + Sbjct: 566 AVSHFRTLPEAATLAAANKRVSNILA----KSGDVLAEQVQAVLLKEPAEIRLAANLITL 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + RY + L ++ +P++ FF+QV+V DD +VR NRL+LL ++++ L Sbjct: 622 QEKLAPLFADGRYQEALVELATLRQPVDDFFEQVMVMADDEQVRINRLTLLNKLRDLFLQ 681 Query: 695 VINV 698 V ++ Sbjct: 682 VADI 685 >gi|325207412|gb|ADZ02864.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis NZ-05/33] Length = 687 Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 213/660 (32%), Positives = 341/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGGLLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 L +L D I+++ + + N T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HG-LIVLHGGD----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|228478361|ref|ZP_04062969.1| glycyl-tRNA synthetase, beta subunit [Streptococcus salivarius SK126] gi|228250040|gb|EEK09310.1| glycyl-tRNA synthetase, beta subunit [Streptococcus salivarius SK126] Length = 678 Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 215/697 (30%), Positives = 355/697 (50%), Gaps = 77/697 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + R ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGRPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ + F +IRP+ + L +L+ E+A +DLD +I Sbjct: 132 G-VPEVLASLTFPVSMHWAN-----NTFEYIRPVHT-LTVLLGEEA----LDLDFLDIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ LK + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQK------------LK--------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---FH 539 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ + F + Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYALSFDSLSY 516 Query: 540 DRLKLYLHDRDIR---------HDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 D L+ R D+ +A+L N + D+++ N +AK + + Sbjct: 517 DNQAEVLNFIKARVDKMMGRTPKDIKDAVLAASN---FVVADMLEAANALSEAAKADGYK 573 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + EK + ++++ S L E EK L I + + S K Sbjct: 574 AAVESLSRAFNLAEKADASVAVDAS----LFENDQEKALAKAIEEL--ELTGSASDKLAQ 627 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FFD +V +D V++NRL+LL Sbjct: 628 -----LFALSPVIDAFFDNTMVMAEDEAVKNNRLALL 659 >gi|283787796|ref|YP_003367661.1| glycine-tRNA synthetase, beta subunit [Citrobacter rodentium ICC168] gi|282951250|emb|CBG90944.1| glycine-tRNA synthetase, beta subunit [Citrobacter rodentium ICC168] Length = 689 Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGNVEWFAAPRRLALKVAKLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G++R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWVRGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L + +I Sbjct: 124 GESAEALLPNMVAASLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDNVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPQFTIDNADQYPQILLERGKVIADYEARKAKIKADAIEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D IV GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIVSGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQTGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + ++ ++ L E L + ++ Sbjct: 571 RTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + EP++ FF++V+VNV+D+E+R NRL++L+ ++ + L V ++ Sbjct: 628 FFAEGRYQEALVELAELREPVDAFFEKVMVNVEDKELRINRLTMLEKLRELFLRVADI 685 >gi|187731977|ref|YP_001882247.1| glycyl-tRNA synthetase subunit beta [Shigella boydii CDC 3083-94] gi|238689523|sp|B2U566|SYGB_SHIB3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|187428969|gb|ACD08243.1| glycyl-tRNA synthetase, beta subunit [Shigella boydii CDC 3083-94] Length = 689 Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTVELDNAGLAHGTVQWFAAPRRLTLKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|308047728|ref|YP_003911294.1| glycyl-tRNA synthetase beta chain [Ferrimonas balearica DSM 9799] gi|307629918|gb|ADN74220.1| glycyl-tRNA synthetase beta chain [Ferrimonas balearica DSM 9799] Length = 697 Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 209/725 (28%), Positives = 346/725 (47%), Gaps = 68/725 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + ++ L + Y ++ + +P RL + + L+ Sbjct: 6 FLVEIGTEELPPKALRTLAESFAANMVDSLNAAELPYGDLTWFASPRRLAIKVSALAAQQ 65 Query: 64 PEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 +KI E+ GP V A KA +G+ RS G+ +I D KG+ L Sbjct: 66 ADKIVEKRGPAVQAAFDADGNPTKAAEGWARSNGITVAEAGRIATD--KGEWLLHKAEVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L +V A+ K+P PK MRW + +IRP++++ +L E ++ Sbjct: 124 GQSAAELLPQMVSEALAKLPIPKPMRWGAYDT-----QFIRPVQTVTLML-----GEHLL 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + GN GHRF + ++ + Y LEE V+ D E R+ I+ D Sbjct: 174 PATILGKASGNTLLGHRFMGEQVLTIEHAEQYPALLEEQGKVIADYERRKAKIVADIQAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G D +LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 234 AAEIGGHADLDDELLEEVTSLVEWPVVLTASFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI VSN+++ D A ++ GN +VV RL DA F Sbjct: 294 EGKLLPKFIFVSNLESKDP-AVVIAGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F D + L+ + RL+ V+F ++GT ++ RI+ L + IA LI AD A RA Sbjct: 334 -FETDKKQTLESLLPRLET--VLFQKQLGTLKDKTDRIQALAEHIAGLIGADRAHAARAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK DL T +V EF + QG +G YA E + A+ E +PR + +P++ ++ Sbjct: 391 QLSKCDLMTNMVFEFTDTQGIMGMHYARHDGEAEAVAVALNEQYQPRFAGDELPSSGVAQ 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQ 527 +++ADK+D+L+ + I + P KDP+ALRRA +GI+RI ++ + + L S Sbjct: 451 ALAIADKMDSLVGIFGIGQPPKADKDPFALRRAAIGILRIAVDKALPLDLFDLAAFSYSL 510 Query: 528 FIEDQNL--------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 F E + L + F R + + + D+I+A+L + Sbjct: 511 FAEQEKLDADGKKGAEICNQVVDFMLGRFRAWYQEEGFPADVIQAVLAVRPTRPVDFDRR 570 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K + F S E + KR+ ILA K I+ ++ L +AEK L +++ Sbjct: 571 VKAVQHFRSLDAAEALAAANKRVGNILA---KVEGPIADQVDAALLQDDAEKVLADIVAQ 627 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ Y L + EP++ FF+ V+VN +D +R NR +LL+ ++ + + Sbjct: 628 VAAKVEPMFAAGDYQNALLALADLREPVDAFFEAVMVNAEDPALRANRQALLKQLRQLFM 687 Query: 694 IVINV 698 V ++ Sbjct: 688 QVADI 692 >gi|322386853|ref|ZP_08060477.1| glycyl-tRNA synthetase beta subunit [Streptococcus cristatus ATCC 51100] gi|321269135|gb|EFX52071.1| glycyl-tRNA synthetase beta subunit [Streptococcus cristatus ATCC 51100] Length = 679 Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 214/717 (29%), Positives = 360/717 (50%), Gaps = 88/717 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQ 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DL+ +I G + GHRF ++ S D Y DL V+ P R I+ Sbjct: 170 AFDLEFLDIKSGRTSRGHRFLG-RETEIASADSYEDDLWAQFVITSPLEREKMIIEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEQEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L + FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLSHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ--LIDAD- 407 ++A D+++ V FH KIG+ E + R + +AQ +DAD Sbjct: 335 -------------KLAIADLVEKLSNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 TADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++ I+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVHILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + E+Q +L FF R++ + DR I D++ A+L+ N + DL Sbjct: 502 LLGRLYELKFDSLSYENQEAVLDFFRARVE-KMMDRSIPKDIVTAVLQSTN---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS- 632 ++ A+ + F + + + ++ + EK + + ++ + EK L A I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNSALFENQEEKDLAAAIEK 615 Query: 633 -DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + ++D L ++ I+ FFD +V +D VR+NRL+LL + Sbjct: 616 VELTPDLAANLDQ---------LFALSPAIDAFFDHTMVMAEDEAVRNNRLALLSSL 663 >gi|193068544|ref|ZP_03049506.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E110019] gi|192958195|gb|EDV88636.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E110019] Length = 689 Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAEFFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|320175983|gb|EFW51056.1| Glycyl-tRNA synthetase beta chain [Shigella dysenteriae CDC 74-1112] Length = 689 Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTVELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|309703962|emb|CBJ03305.1| glycine-tRNA synthetase, beta subunit [Escherichia coli ETEC H10407] Length = 689 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSDPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|317494687|ref|ZP_07953099.1| glycyl-tRNA synthetase beta subunit protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917289|gb|EFV38636.1| glycyl-tRNA synthetase beta subunit protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 689 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 209/723 (28%), Positives = 341/723 (47%), Gaps = 71/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + Y P RL L + L Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNADLAHGEVTWYAAPRRLALKVAALHESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERLTSD--KGEWLLFRAHQK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + +L T+V A+ K+P PK MRW + ++RP+ ++ +L +E +I Sbjct: 124 GQSAQQLLPTLVTNALGKLPIPKLMRWGNNDT-----QFVRPVHTVTLLLGSE-----VI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + IP + GHRF + + D Y + L E V+ D E R+ I D+ + Sbjct: 174 PATILGIPSDRVIRGHRFMGEPQFTIDNADQYPQILMERGKVIADYETRKAIIKRDSEQA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQKIGGIADMSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 AGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++GT ++ +RI L IA+ I ADV L Sbjct: 352 --------------------------VLFQQQLGTLRDKTNRIEALSGWIAEQIGADVNL 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA EN A+ E +PR + +P Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGENEEVAVALNEQYQPRFAGDALPE 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L E Sbjct: 446 SLVACSVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLVTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + + D I+A+L +K Sbjct: 506 EAARLYGQKLTNANVVDDVVDFMLGRFRAWYQEEGHSVDTIQAVLARRPTKPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE +L + Sbjct: 566 AVSHFRTLPEAAALAAANKRVSNILA---KSTEVLADRVHASVLKEAAEIKLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L ++ EP++ FF+QV+V +D +VR NRL+LL ++++ L V Sbjct: 623 DKLEPLFAEGRYQEALSELAALREPVDDFFEQVMVMAEDEQVRINRLTLLSKLRDLFLQV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|332533695|ref|ZP_08409554.1| glycyl-tRNA synthetase beta chain [Pseudoalteromonas haloplanktis ANT/505] gi|332036859|gb|EGI73320.1| glycyl-tRNA synthetase beta chain [Pseudoalteromonas haloplanktis ANT/505] Length = 689 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 221/720 (30%), Positives = 345/720 (47%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L +K L Sbjct: 5 NLLVEIGTEELPPKALRKLAEAFAANLTQELETLELAHQGVSWYASPRRLGLQVKALEAK 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP A KA G+ R G++ + D Q + KG L + + Sbjct: 65 QQDKEVEKRGPATKAAFDSEGNPTKAAMGWARGCGIE-VKDAQTL-ETDKGAWLLHIAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ K+P PK MRW + +IRP+ ++ + E + +I Sbjct: 123 AGQETKTLMTDAITKALSKLPIPKPMRWGANKT-----QFIRPVHTVTILFGDELLEGEI 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + K+I N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 178 LG---KQIT--NQLQGHRFHHPEKISINHADDVFDVLKSAYVIADYEQRKAQIRAQIEEA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ASAV + D+DLLEE+ LVEW +F++ +L +P E + T+K +QK F + Sbjct: 233 ASAVNAVVAMDEDLLEEVTSLVEWPVTLTATFEEAFLDVPAEALIYTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F+ VSNI++ D + ++ GN +VV RL DA F Sbjct: 293 NGKLLNKFLFVSNIESKDP-SVVISGNEKVVRPRLADAQFF------------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F D K L+ R+ LD V+F ++GT ++ RI L IA+ + AD L RA Sbjct: 333 -FETDKKKTLESRLESLD--SVLFQKQLGTLKDKSERISELAGYIAEQLGADKDLAQRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EF ++QG +G YA E A E PR +N+PTN IS Sbjct: 390 LLSKTDLMTEMVMEFTDVQGVMGMHYARHDGEAEDVAVAQNEQYMPRFAGDNLPTNLISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + + + + Sbjct: 450 AVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKELPLDILDLVAKSQTL 509 Query: 536 L---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F R + + D I D+I+A+L + +K ++ F Sbjct: 510 FGDKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKAVSHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL--EAEKRLYAVISDFGTHI 638 + E + KR+ ILA KN +I+ + S LL +AEK L + ++ F T + Sbjct: 570 RTLDAAEALAAANKRVGNILA----KN-DITSQGSVDESLLSDDAEKVLASQVAKFATDL 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + L I E ++ FFD V+V DD V+ NRL+LL + + L + ++ Sbjct: 625 APLYADGNYQEALSQLAGIRESVDNFFDNVMVMADDEAVKQNRLALLNQLSGLFLGIADI 684 >gi|213968433|ref|ZP_03396576.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|301384279|ref|ZP_07232697.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato Max13] gi|302060159|ref|ZP_07251700.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato K40] gi|302130432|ref|ZP_07256422.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926721|gb|EEB60273.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|330876370|gb|EGH10519.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 684 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 335/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G+ +I + K +L K Sbjct: 65 QPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDL---SEIDQSGPKLRYSQTILGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P K MRW ++RP + ++ + +++ Sbjct: 122 P---TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 VDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVEEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ASQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDA 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF A++G+ ++ R+ L IA I D RA Sbjct: 339 TFNDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 386 LLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKVKPAGLAEQVLEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVADI 680 >gi|28867425|ref|NP_790044.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato str. DC3000] gi|38258482|sp|Q88B35|SYGB_PSESM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28850659|gb|AAO53739.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] Length = 684 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 335/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G+ +I + K +L K Sbjct: 65 QPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDL---SEIDQSGPKLRYSQTILGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P K MRW ++RP + ++ + +++ Sbjct: 122 P---TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 VDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAANVLADFNERRQIISKRVEEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ASQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDA 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF A++G+ ++ R+ L IA I D RA Sbjct: 339 TFNDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 386 LLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKVKPAGLAEQVLEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVADI 680 >gi|254362729|ref|ZP_04978813.1| glycine--tRNA ligase [Mannheimia haemolytica PHL213] gi|261491870|ref|ZP_05988449.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|153094354|gb|EDN75209.1| glycine--tRNA ligase [Mannheimia haemolytica PHL213] gi|261312525|gb|EEY13649.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 688 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 206/720 (28%), Positives = 357/720 (49%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKVLSLAES 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ + G+ +I D + V+ AV+ Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK+MRW ++RP+ ++ + AE Sbjct: 125 QPTK---NLLVDIIAKSLANLPIPKTMRWGDKTE-----QFVRPVHTVTLLFGAE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ + G GHRF ++++ D Y + L++ V+ D R+ IL + Sbjct: 172 LIEGEILGVKSGRTIRGHRFLGEREFQIENADQYPQLLKDRGSVVADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +++G L FI VSNI D + I++GN +VV RL DA F Sbjct: 292 SKDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 F DL + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD R Sbjct: 334 ---FKTDLKQKLEDQLPRLET--VLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + I D+I+A+L ++ ++ Sbjct: 509 QLFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K + I +I + AEK L + + Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KADIAIG-DIDVSACVEPAEKALAEAVIALKAEV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + Y + D L ++ +P++ FFD V+VN +D+++R NRL++L ++ + L V ++ Sbjct: 625 QPLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVADI 684 >gi|328950890|ref|YP_004368225.1| glycyl-tRNA synthetase, beta subunit [Marinithermus hydrothermalis DSM 14884] gi|328451214|gb|AEB12115.1| glycyl-tRNA synthetase, beta subunit [Marinithermus hydrothermalis DSM 14884] Length = 698 Score = 289 bits (740), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 225/741 (30%), Positives = 353/741 (47%), Gaps = 106/741 (14%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EE+PA + E L L + Y+ + Y TP RL L + GL+ H Sbjct: 2 DLLFEIGTEELPAWYVTEGLEALKKRTAERLLAARLEYEELTGYATPRRLALVVTGLAAH 61 Query: 63 SPEKIEERLGP--RV----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 EER GP RV G KA +GF R G++ + D + G VY V+ + Sbjct: 62 QARLEEERRGPPARVAFQDGKPTKAAEGFARKNGVR-VEDLY----ERDGYVYARVVDE- 115 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL ++ +++P PK MRW P +IRP++ ++ +L E ++ Sbjct: 116 GRPAREVLPKLLAEVARELPAPKPMRWGHGEGP-----FIRPVRWLVALLDGE-----VL 165 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L++ + G T GHRF P + +Q Y+ L EA V++DPE RR I+ +A LA Sbjct: 166 PLEVFGVRAGRETRGHRFLHPGLLALQDAASYVTALHEARVVVDPEVRRERIITEAATLA 225 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 A GLE+V KDLLEE+ GLVEW MG FD++YL LP+E++ + +Q+ F R ++ Sbjct: 226 LAEGLEVVLPKDLLEEVTGLVEWPVGVMGRFDERYLELPDEVLAEVMIVHQRFFPVRGKD 285 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N FI ++N D + +G V+ RL DAL FW+ Sbjct: 286 GRLTNRFIGIAN-HLPDHLETVRRGYEGVLEGRLADALFFWR------------------ 326 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 DL PL + ARL ++ FH +GT ++ R+R + + + + AD+ ++ A Sbjct: 327 --ADLKTPLAEHRARLKGIN--FHKGLGTMWDKTERVRRAAEALGEAVGADLGVLREAAG 382 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L +ADL T++V EFPEL+G + + YA Q + A+EE ++P+G +P + Sbjct: 383 LLRADLGTQMVYEFPELEGIMARAYAERQGVDPRVARALEEAVRPQGGSGALPESTEGAL 442 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL 536 +S+ DK DTL+ F+ + + PSGS DP+ LRR +G++R++ D+PL + +E Sbjct: 443 LSVLDKADTLVGFFQLGKTPSGSADPFGLRRVAVGLVRVLGAMGWDLPLGKVLEAAA--- 499 Query: 537 FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD----------LIKHLNEFFSSAKG 586 + Y R ++ EA LR +L ++ L E + G Sbjct: 500 ------ESY---RAWGLEVEEAALRTAEGFVLERLEGLLVEAGLPVLAVRAAEVAPTVYG 550 Query: 587 EKFLLSAKRIFQILAIEE--------KKNREISLEIS------PQYLLLEAEKRLYAVIS 632 +L A+ + Q+ E K+ ++ E S P E LYAV+ Sbjct: 551 --VMLRARLVAQLAGEPEFAGLQLLYKRAANLAREASGVHAPDPALFQTPEEAALYAVLP 608 Query: 633 ----------DFGTHIQESMDHKR-YHQIGDLLHSICEP----------IEIFFDQVLVN 671 + GT + D ++G L + P ++ F D VLV Sbjct: 609 RVEAGVARLLELGTELMPPWDPAAPLPRVG--LEPLAAPLREVVALKDALDRFLDNVLVM 666 Query: 672 VDDREVRDNRLSLLQYIKNII 692 VDD VR+NRL+LL+ +++ + Sbjct: 667 VDDPAVRENRLALLRRVRDAV 687 >gi|71736576|ref|YP_272325.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485592|ref|ZP_05639633.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298484619|ref|ZP_07002723.1| Glycyl-tRNA synthetase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123734064|sp|Q48QJ1|SYGB_PSE14 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71557129|gb|AAZ36340.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160843|gb|EFI01860.1| Glycyl-tRNA synthetase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|331011880|gb|EGH91936.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 684 Score = 289 bits (740), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 211/716 (29%), Positives = 333/716 (46%), Gaps = 60/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K +L KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKP- 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 123 --TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELAT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F EG Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A IV GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPE+QG G YA E A+ E PRG +PT V Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 ++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFG 507 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 508 AKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRK 567 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 568 LPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMA 624 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 625 AERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|76798315|ref|ZP_00780561.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 18RS21] gi|76586345|gb|EAO62857.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 18RS21] Length = 679 Score = 289 bits (740), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 215/700 (30%), Positives = 359/700 (51%), Gaps = 82/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQIFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL ++ D + ++ + VY+ K I DVL + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGL-SVDDIEFREVKGEEYVYVTKHETGKSAI-DVLAS 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I G Sbjct: 133 VTEV-LTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + D Sbjct: 182 RISRGHRFLGS-DTEISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL-DLSKPL 365 N A + +++GN +V+ ARLED FW+ DQ K N+ DL + L Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQ--------------KLNIADLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 Q V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 346 KQ---------VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE-FFSSAKGE 587 + ++ F R++ + + + D+ EA+L E+D IV LI ++ +K Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVL--ESDTY--IVSLILEASQALVQKSKDA 571 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHK 645 ++ +S + + + + EK + ++ S L E EK LY I + E M Sbjct: 572 QYKVSVESLSRAFNLAEKVTHSVLVDSS----LFENNQEKALYQAI--LSLELTEDM--- 622 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 H D L ++ I FFD +V DD +++ NRL+LL Sbjct: 623 --HDNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALL 660 >gi|121592958|ref|YP_984854.1| glycine--tRNA ligase [Acidovorax sp. JS42] gi|229470692|sp|A1W3F3|SYGB_ACISJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120605038|gb|ABM40778.1| glycyl-tRNA synthetase beta chain [Acidovorax sp. JS42] Length = 720 Score = 289 bits (740), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 229/741 (30%), Positives = 359/741 (48%), Gaps = 99/741 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L+ L+ +G+ + + + +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAGVLLEQLQAQGLTSAHSQLTAFASPRRLAAHITEVL 64 Query: 61 PHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKK--DPKKGDVYLA 111 P + +K + ++L P G A+ L + G S Q+K+ D K ++ Sbjct: 65 PAAADKAVSQKLMPVAVGLDASGQPTPALLKKLTALGADAASVPQLKRVHDGKAEVLFFE 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPISAFSWIRPLKSILCI 165 + K L+ D L+ + AI K+P PK MR W++ H ++RP Sbjct: 125 SMAK-GALLADGLQKALDEAIAKLPIPKVMRYQLQDGWTSVH-------FVRPAHG---- 172 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPEC 223 LVA + ++ + + GN T+GHRF A P+ +QS D Y L E V+ Sbjct: 173 LVALHGTQVLVGVQALGLTAGNTTHGHRFEASVDPVVIQSADSYAEQLRSEGAVIASFAE 232 Query: 224 RRNAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRL 281 RR I A VG + +ED LL+E+ LVE V + F+K++L +P+E + L Sbjct: 233 RRAEIARQLQAAADRVGGGVRPIEDAALLDEVTALVERPNVLVCEFEKEFLAVPQECLIL 292 Query: 282 TIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 T+K NQK F EG L + F++VSNI D +A++QGN RVV RL DA F+ +D+ Sbjct: 293 TMKANQKYFPLLDAEGKLTHQFLVVSNISPQDA-SAVIQGNERVVRPRLADAKFFFDQDR 351 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKI 400 K L ++R+D L VV+H K+GTQGERV R+R + K I Sbjct: 352 K--------------------KTL---VSRVDQLAKVVYHNKLGTQGERVERVRHIAKAI 388 Query: 401 AQ-----LIDADVAL---------------VDRAIVLSKADLCTEIVREFPELQGKIGKE 440 A L + AL VD A +L+K DL T++V EFPELQG +G Sbjct: 389 ATQLFTALAQGNAALDSQEGEIAQDYLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGY 448 Query: 441 YAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSK 500 YAV AIE+H KPR + +P + + V+LADKL+TL+ + I P+G + Sbjct: 449 YAVSDGLPDEVAHAIEDHYKPRFAGDALPRENVGVVVALADKLETLVGMFGIGNLPTGDR 508 Query: 501 DPYALRRATLGIIRIILENKID----------IP-LSQFIEDQNLIL--FFHDRLKLYLH 547 DP+ALRR LG+IR+++E ++ +P IED + L F +DRL L Sbjct: 509 DPFALRRHALGVIRMLVEKELPLDLDALLASAVPAFGDKIEDTSAQLADFIYDRLAGSLR 568 Query: 548 DRDIRHDLIEAI--LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 ++ ++A+ LRP+ L + ++ + F + + KR+ IL K Sbjct: 569 EQGYSAQEVDAVIALRPQ--RLALVPRQLEAVRAFTQLEEAPALAAANKRVTNIL----K 622 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 K E+ ++ + L AEK LYA + F D Y L + P++ FF Sbjct: 623 KAGEVDPHVNEELLQEPAEKDLYAALQRFVPEANAQFDSGDYTASLQTLAVLRAPVDAFF 682 Query: 666 DQVLVNVDDREVRDNRLSLLQ 686 D V+VN ++ +R NR LL+ Sbjct: 683 DDVMVNAEELALRLNRQGLLK 703 >gi|237728873|ref|ZP_04559354.1| glycyl-tRNA synthetase subunit beta [Citrobacter sp. 30_2] gi|226909495|gb|EEH95413.1| glycyl-tRNA synthetase subunit beta [Citrobacter sp. 30_2] Length = 689 Score = 289 bits (740), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 212/721 (29%), Positives = 339/721 (47%), Gaps = 67/721 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGIAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESAETLLPNMIATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + S D Y L E V+ D R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDSADQYPEILRERGKVIADYAERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVHTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-IQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEI--SPQYLLLEAEKRLYAVISDFGTH 637 + + KR+ ILA EE N ++ P+ + L + V+ D Sbjct: 571 RTLEAASALAAANKRVSNILAKSEETLNDRVNAATLKEPEEIALAMQ---VVVLRD---K 624 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ RY + L + EP++ FF++V+VNV+D+++R NRLS+L+ ++ + L V + Sbjct: 625 LEPVFAAGRYQEALVELAELREPVDAFFEKVMVNVEDKDLRINRLSMLEKLRELFLRVAD 684 Query: 698 V 698 + Sbjct: 685 I 685 >gi|294669014|ref|ZP_06734100.1| glycyl-tRNA synthetase, beta subunit [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309006|gb|EFE50249.1| glycyl-tRNA synthetase, beta subunit [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 687 Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 214/660 (32%), Positives = 343/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQIKNVKAIQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSGNQTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI + A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALNEQAGRLKATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTTFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ E++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-EVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLL 669 >gi|116492863|ref|YP_804598.1| glycyl-tRNA synthetase, beta subunit [Pediococcus pentosaceus ATCC 25745] gi|122265673|sp|Q03F66|SYGB_PEDPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116103013|gb|ABJ68156.1| glycyl-tRNA synthetase beta chain [Pediococcus pentosaceus ATCC 25745] Length = 690 Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 209/730 (28%), Positives = 358/730 (49%), Gaps = 75/730 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 ++LLEI EEIPA + + + L + LKE + Y ++ + TP RL + + GL Sbjct: 4 NYLLEIGLEEIPAHVVTPSIKQLVQKVTAFLKENRLTYDSIDHFSTPRRLAIRINGLGDQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ E+ GP G KA GF R GL T+ D K VY+ L K Sbjct: 64 QPDIEEDAKGPARKIAQDADGNWTKAAIGFTRGQGL-TVDDITFKTIKGTDYVYVHKLIK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + +++L + V ++ + +P M+W+ F ++RP++ ++ IL E++ Sbjct: 123 GK-MTKEILTGLKEV-VESINFPTMMKWANFD-----FKYVRPIRWLVSIL-----DEEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ G T GHRF +++ + + Y L + V++D + R+ I N + Sbjct: 171 LPFSILDVTAGRRTEGHRFLG-EAVELANAEEYEAKLHDQFVIVDADERKQLISNQIKAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + + LLEE+ LVEW F G FD+KYL +PEE++ +++ +Q+ F R + Sbjct: 230 AESNRWNVTPNPGLLEEVNNLVEWPTAFNGGFDEKYLAIPEEVLITSMRDHQRFFFVRDQ 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V N + +V+GN +V+ ARLEDA F++ DQ + Sbjct: 290 AGKLLPNFISVRN-GNEEFIENVVRGNEKVLTARLEDAAFFYEEDQKH------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 D++ +D+ + V FH KIG+ E++ R+ + K I ++ ++ +D Sbjct: 337 ----DINYYVDR------LKKVSFHDKIGSMYEKLQRVNSIAKVIGNTLNLNQTELDDID 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA ++ K DL T +V EF ELQG +G++YA L EN + AI EH P ++P + Sbjct: 387 RATMIYKFDLVTGMVGEFSELQGVMGEKYAQLNGENQAVAQAIREHYMPNSAEGDLPESV 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 V+LADK D + +F++ PSGS DPYALRR GI+RI+ + L+QF Sbjct: 447 TGAVVALADKFDNIFSFFSAGMIPSGSNDPYALRRHAYGIVRILNSRDWQLDLNQFKSQV 506 Query: 531 ---------------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 DQN + FF+DR+K L + I HD++E +L N ++ I++ Sbjct: 507 KTELAENGTAFGVDVDQNFDQVLNFFNDRIKQLLDHQKISHDIVETVLTGNNHDVTEIIE 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L + +S+ + + + R+ +I E+ L + PQ +E L+ I Sbjct: 567 AAQVLADAKASSTFKDDIEALTRVQRIATKNEESGE---LNVDPQLFNNASEGELFDQII 623 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 E+ ++ Q+ L + I +FD +V D ++ NRL+++ + N+I Sbjct: 624 KI-----EAANNLTMSQLFAKLCELTPAISKYFDATMVMDKDENIKRNRLNMMSRLANLI 678 Query: 693 LIVINVQKIV 702 L + ++ ++ Sbjct: 679 LKIGDLTNVL 688 >gi|229844013|ref|ZP_04464154.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 6P18H1] gi|229813007|gb|EEP48695.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 6P18H1] Length = 688 Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 214/721 (29%), Positives = 349/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNGIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYLPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDKLPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLLLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA + EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP------AEKALAEAVLALRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|300812194|ref|ZP_07092636.1| glycine--tRNA ligase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496830|gb|EFK31910.1| glycine--tRNA ligase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 688 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 218/731 (29%), Positives = 356/731 (48%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 4 DFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ S I + KG Y V ++ Sbjct: 64 QADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGM---SADDIYFEELKGVEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +++L + V I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 121 KAGKEAKEILLGLDEV-IKSMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R+ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLGDSVV-LANADDYVEALRDQYVIVDADERKAMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVNSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L N FI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINYFISVRN-GNKDHLENVISGNEKVLVARLDDAVFFYDEDRK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + R+D V FH KIG+ E+++R+R++G +A+ L +VA Sbjct: 336 --------YPLSHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYARLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q + Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + +D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQEAEEDKQLADFIRDRIKQFLQKNNYLYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL +K + + P +E+ LY + Sbjct: 566 AAAKVLQQHHDDEAFKPVVESLTRIANIL---KKAKFSQASPVDPSLFEDRSEQDLYNGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + DH ++ L + I+ +FD ++ D V++NRLS L + ++ Sbjct: 623 E----ALANVKDHAELYEAFVALQGV---IDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|241759537|ref|ZP_04757640.1| glycyl-tRNA synthetase, beta subunit [Neisseria flavescens SK114] gi|241320094|gb|EER56455.1| glycyl-tRNA synthetase, beta subunit [Neisseria flavescens SK114] Length = 687 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 214/660 (32%), Positives = 340/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 INDGKQ-DVYAYEYVQTGKPLGELLVDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 L +L D I+++ + + GN T GHRF + I +++ D Y + E+ V Sbjct: 163 HG-LIVLHGSD----IVNVSVLGLQSGNKTLGHRFLSSGEIAIENADSYAAQMREQGKVE 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI + A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALNEQAGRLKATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 A+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HTAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLNGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRR+ LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRSALGILRMLMQ 494 Query: 519 NKIDI------PLSQFIED-------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ + F + F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFNSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKISAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|289648601|ref|ZP_06479944.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 2250] Length = 684 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 335/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G+ +I + K +L K Sbjct: 65 QPDRSVNLDGPPRQAAFDANGNPTQAALGFAKKCGVDL---SEIDQSGPKLRYSQTILGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P K MRW ++RP + ++ + +++ Sbjct: 122 P---TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 VDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDA 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ K+ Sbjct: 289 EGKLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF A++G+ ++ R+ L IA I D RA Sbjct: 339 TFNDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 386 LLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DR++ D + + ++ + + L ++ + F Sbjct: 506 FGAKIKPAGLAEQVLDFIFDRMRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|156936270|ref|YP_001440187.1| glycyl-tRNA synthetase subunit beta [Cronobacter sakazakii ATCC BAA-894] gi|166227913|sp|A7MKS3|SYGB_ENTS8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|156534524|gb|ABU79350.1| hypothetical protein ESA_04169 [Cronobacter sakazakii ATCC BAA-894] Length = 689 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 213/724 (29%), Positives = 340/724 (46%), Gaps = 73/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDAAGLAHGVVSWFAAPRRLALKVANLAASQ 65 Query: 64 PEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP V A KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 PDREVEKRGPAVSAAFDAEGNPSKAAEGWARGCGITVDQAERLVTDKGEWLMYRAHVKGE 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW S ++RP+ ++ +L ++++ Sbjct: 126 S--AQALLPNMVSTALSKLPIPKLMRWGA-----SDVQFVRPVHTVTLLL-----DDEVL 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + D Y + L E V+ D R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYNARKAKIQQDAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AAKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYGT 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-RQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGTLRDKTDRIQALSGWIASQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVAVALNEQYMPRFAGDALPSSLVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPEN-DNLLTIVDLI 574 +++ F R + + D D I+A+L RP + D + V Sbjct: 511 YGSKLTNAKVVDDVVDFMLGRFRAWYQDEGYSVDTIQAVLANRPTRPADFDARMKAVSHF 570 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+E + A KR+ ILA K ++ E+ L + E RL ++ Sbjct: 571 RTLDEAVALAAAN------KRVSNILA---KATEPLNDEVHASVLKEDPEIRLALQVAVM 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +Q RY + L + EP++ FF++V+VN DD +VR NRL+LL ++ + L Sbjct: 622 RDKLQPLFAEGRYQEALVELAQLREPVDEFFEKVMVNADDAQVRINRLTLLSKLRALFLQ 681 Query: 695 VINV 698 V ++ Sbjct: 682 VADI 685 >gi|42520058|ref|NP_965973.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409795|gb|AAS13907.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 705 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 224/723 (30%), Positives = 356/723 (49%), Gaps = 72/723 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP-HS 63 L E SEEIP RMQ+ A + + + + V + +M + T R+ L++ ++ Sbjct: 6 LFECLSEEIPPRMQNVVATQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNINALEL 65 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 + E GP + A K AI+GFLR Q + + + D Y I + Sbjct: 66 KDSNNEVKGPNINAPKSAIEGFLRK--YQKNEEDLLVRKVNNEDFYFIKRESCSFNIREF 123 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 LK + ++ W KSMRW W+RP+K+ILCIL ++II + I Sbjct: 124 LKNQLEEMLKNFSWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPVSFAGI 173 Query: 184 PCGNITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 N TYGHRF + + V++ Y LE+ V+L + R+ IL+ ++ L+ Sbjct: 174 TASNTTYGHRFLSSGTALTVKAPKDYFELLEKNSVILQMDKRKQFILDQINKFTKEQNLQ 233 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDK-KYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 L ++ LL E+ GL+EW V G ++ K LP+E+I + T QK G + Sbjct: 234 LEKNDYLLNELTGLIEWPIVLFGEVNQEKSFGLPKEVILSIVNTQQKYLALSN--GKRIS 291 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+ V N+ +V+G+ R++ ARL DA +D+ KE+ Sbjct: 292 HFVTVVNVNN----GEVVKGHERILEARLADAQFLISQDK---------KEN-------- 330 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLSKA 420 LD + +L ++FHA +G+ GE+V RI L K IA I A + V+ A L+KA Sbjct: 331 ---LDYYVKKLG--SILFHASLGSVGEKVKRITALSKYIAIFIPHASLIKVECAAYLAKA 385 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T IVREFPELQG +G YA E+ +AI EH KP GP + P + +I VS+A Sbjct: 386 DLATSIVREFPELQGVMGGYYASYFQEDKEVVEAITEHYKPIGPEQECPKSPSAIAVSIA 445 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----------SQFI 529 DK+D+L+ A EK SGS D + LRR T+GIIR ILEN + +P+ S+ + Sbjct: 446 DKVDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILENNLHVPIRLMIDKSVSLYSRLL 505 Query: 530 EDQN---------------LILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDL 573 ++N + F +R K+ L +RDIR D++++IL + + ++LLT Sbjct: 506 FNKNTASVDKPNRKQISELVFRFCLERFKVILKNRDIRQDVVDSILYKIDINDLLTAEKR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVIS 632 L+ + S+ +GE+ L + KR+ +++ K + S ++L+ E L Sbjct: 566 TVILDRYLSTPEGEQILSTYKRVSNMMSKARKSDGTTYSASYGKRFLIESEEIALSNCAI 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 +I++++ + ++ D L S I F D + +N D ++R NRLSLL+ + +I Sbjct: 626 TACKNIKQAIKNNHFNVALDELASFAPFINKFMDSIKINCDSDKLRRNRLSLLENVVSIF 685 Query: 693 LIV 695 +V Sbjct: 686 HLV 688 >gi|331017695|gb|EGH97751.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 684 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 335/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G+ +I + K +L K Sbjct: 65 QPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDL---SEIDQSGPKLRYSQTILGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P K MRW ++RP + ++ + +++ Sbjct: 122 P---TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 VDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAANVLADFNERRQIISRRVEEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ASHQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDA 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF A++G+ ++ R+ L IA I D RA Sbjct: 339 TFNDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 386 LLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKVKPAGLAEQVLEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVADI 680 >gi|170766599|ref|ZP_02901052.1| glycyl-tRNA synthetase, beta subunit [Escherichia albertii TW07627] gi|170124037|gb|EDS92968.1| glycyl-tRNA synthetase, beta subunit [Escherichia albertii TW07627] Length = 689 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAQAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGNPTKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQADRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 >gi|329894834|ref|ZP_08270634.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC3088] gi|328922728|gb|EGG30062.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC3088] Length = 694 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 214/705 (30%), Positives = 338/705 (47%), Gaps = 72/705 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + A+ ++ + + + + TP RL + + L S Sbjct: 12 FLIEIGTEELPPKSLRALAQSFHDEVVAGFSHLNLAPVDSKWFATPRRLAVRINQLPSRS 71 Query: 64 PEKIEERLGPRVGAGKK-------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E LGP A K A GF + G+ +D D KG P Sbjct: 72 PDTQEIVLGPPAAAAKNDAGEWTPAAIGFAKKQGVS--ADALELIDSDKGPRLGFTKTVP 129 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E V +V A+ K+P K MRW ++ + ++RP+ ++C+ D I Sbjct: 130 GAQTELVAAHVVNEALAKLPIAKRMRWGSSRT-----EFVRPVHWVVCLYGDNDDLGTIF 184 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L +++GHRF AP PIK++S Y DL A V+ + E R+ IL LA Sbjct: 185 GLT-----ASRVSHGHRFMAPEPIKIRSAATYEEDLLAAKVIANYEKRKAMILKQVKNLA 239 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + + D DLL+E+ LVEW G FD+ +L +P E + ++K +QK F + E Sbjct: 240 ATYSADAQIDDDLLDEVTALVEWPVALSGEFDRDFLRVPSEALIASMKEHQKYFHLQDAE 299 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+NI++ + IV GN RV+ RL DA F+ D Sbjct: 300 GELLPRFITVANIESPEP-ERIVHGNERVIRPRLADAAFFYDTD---------------- 342 Query: 357 FNLDLSKPLDQRMA--RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L R+A R+ + + F K+G+ ++V R+ L IA I AD ++ R Sbjct: 343 --------LKTRLADRRIVLEKMTFQHKLGSVYDKVVRVASLASFIATKIGADASIAARG 394 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K+DL +E+V EFPELQG G YA + D IE+H PR +++P N + Sbjct: 395 AELAKSDLASELVNEFPELQGIAGAYYARAEGLGDEIADVIEQHYLPRFATDDLPDNLEA 454 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++AD+ DTL +AI E PSGSKDP+ALRRA+L ++R+I++N +++ L++ + Sbjct: 455 TAVAIADRCDTLAGIFAIGEIPSGSKDPFALRRASLAVLRLIIDNNLNLDLAELFSEALR 514 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++LI + ++R + I + A++ N + +D + LN Sbjct: 515 RLPFDVPPNSLESLIAYLNERYYARYEAQGIPITTVRAVI---NQGVNEPLDFQRRLNAL 571 Query: 581 --FSSAKGEKFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDFGT 636 FS L SA KR+ ILA + S I LL+E AE L + Sbjct: 572 VVFSDMPEALALASAYKRVGNILA-----KADASKPIYSDELLVETAEHALAKALQALKP 626 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + ++++ K Y L S+ EP+++FF++V+VN +D ++R NR Sbjct: 627 ALDKAINAKDYSGYLTHLASLREPVDVFFNEVMVNAEDDKLRQNR 671 >gi|289626617|ref|ZP_06459571.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 684 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 210/716 (29%), Positives = 333/716 (46%), Gaps = 60/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K +L KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKP- 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 123 --TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELAT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F EG Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A IV GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPE+QG G YA E A+ E PRG +PT V Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 ++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFG 507 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + ++ F DR++ D + + ++ + + L ++ + F Sbjct: 508 AKIKPAGLAEQVLDFIFDRMRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRK 567 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 568 LPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMA 624 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 625 AERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|238910311|ref|ZP_04654148.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 689 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 340/722 (47%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE ++ L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAVNFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YDDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|237801654|ref|ZP_04590115.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024513|gb|EGI04569.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] Length = 684 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 213/716 (29%), Positives = 335/716 (46%), Gaps = 60/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + AE + L+ G+ Y + Y P RL + + LS Sbjct: 5 DFLVELGTEELPPKTLVSLAEAFLAGIEKGLQGAGLTYSAKQVYAAPRRLAVLITALSTQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K +L KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLNEIDQSGPKLRYSQTILGKPT 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 124 M---SLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAHVLADFNERRQIISKRIEELAT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F +G Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDVDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVYDKAERVSKLAAYIAPRIGGDAQRAARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPE+QG G YA E A+ E PRG +PT V Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGFYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQFI 529 ++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L +QF Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVDTVKFAVTQFG 507 Query: 530 ED-------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 508 TKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRK 567 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 568 LPQAAALAAVNKRVSNLLS---KAEGNIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMA 624 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D +VR NR +LL ++ + L V ++ Sbjct: 625 AERQYSESLARLAMLREPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADI 680 >gi|22536454|ref|NP_687305.1| glycyl-tRNA synthetase subunit beta [Streptococcus agalactiae 2603V/R] gi|81845501|sp|Q8E1T3|SYGB_STRA5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|22533283|gb|AAM99177.1|AE014203_24 glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 2603V/R] Length = 679 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 214/700 (30%), Positives = 359/700 (51%), Gaps = 82/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQIFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL ++ D + ++ + VY+ K I DVL + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGL-SVDDIEFREVKGEEYVYVTKHETGKSAI-DVLAS 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V + ++ +P +M W+ ++F +IRP+ +++ +L ++ ++LD +I G Sbjct: 133 VTEV-LTELTFPVNMHWAN-----NSFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + D Sbjct: 182 RISRGHRFLGS-DTEISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL-DLSKPL 365 N A + +++GN +V+ ARLED FW+ DQ K N+ DL + L Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQ--------------KLNIADLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 Q V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 346 KQ---------VTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 397 LTGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + + + Sbjct: 457 FDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE-FFSSAKGE 587 + ++ F R++ + + + D+ EA+L E+D IV LI ++ +K Sbjct: 517 ANQKEVMAFISARIEKMIGSK-VPKDIREAVL--ESDTY--IVSLILEASQALVQKSKDA 571 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHK 645 ++ +S + + + + EK + ++ S L E EK LY I + E M Sbjct: 572 QYKVSVESLSRAFNLAEKVTHSVLVDSS----LFENNQEKALYQAI--LSLELTEDM--- 622 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 H D L ++ I FFD +V DD +++ NRL++L Sbjct: 623 --HDNLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLAIL 660 >gi|332991514|gb|AEF01569.1| glycyl-tRNA synthetase subunit beta [Alteromonas sp. SN2] Length = 692 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 205/699 (29%), Positives = 339/699 (48%), Gaps = 58/699 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+E+ +EE+P + E + L + + ++ + P RL +Y+ L+ Sbjct: 7 LIELGTEELPPKALKSLGEAFAQQFEAALTAAELSFTSVSWFAAPRRLAVYVSALAESQA 66 Query: 65 EKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 +K E+ GP V A KA G+ R G+ ++ D KG+ L P Sbjct: 67 DKTVEKRGPAVSAAFDTDGNPTKAAQGWARGNGISVEDAERLVTD--KGEWLLHKAHVPG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + I ++L +++ AI K+P PK+MRW + +IRP+ ++ + +E +++ Sbjct: 125 KQIGELLASLLNQAIAKLPIPKAMRWGNYTT-----QFIRPVHTLTALYGSE-----VVN 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L + G GHRFH ++ D+Y LE V+ D R++ + A Sbjct: 175 LTALGLASGRTIQGHRFHGEARFELDHADNYASALEAHYVVADFTARKDKVRQQLQTAAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 A+ L+ ++DLLEEI LVEW V SF++ +L +P+E + T+K +QK EG Sbjct: 235 ALSLKPDFNEDLLEEIASLVEWPVVMQASFEEGFLAVPKEALIYTMKDDQKYVPLLDSEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N F+ VSNI++ D ++ GN +V+ RL DA F F Sbjct: 295 QLSNTFLFVSNIESQDP-IQVISGNEKVIRPRLADAEFF--------------------F 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N D L+ R+A L+ V+F ++GT E+ RI L IA IDA+ AL RA +L Sbjct: 334 NSDKKTSLESRLASLE--SVLFQKQLGTLKEKSERISSLSGFIASQIDANEALAARAGLL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL T +V EFP++QG +GK YA+ E+ + +A+ E PR + +P+ +S V Sbjct: 392 AKTDLMTNMVMEFPDVQGVMGKYYALNDGEDAAVAEALYEQYMPRFAGDALPSPGVSAAV 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 +LADKLDTL+ + I + P G KDP+ALRRA +G++RII E + + L + Sbjct: 452 ALADKLDTLVGIFGIGQLPKGDKDPFALRRAAIGVLRIITELSLPLDLEVLVAKAGEVYG 511 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++ F R L D+ I D+I+A+ V + + EF Sbjct: 512 DKLSNQDFQAQVVDFVLARFVAVLQDQGIAIDVIQAVSARRPTQPSDYVARVNAVAEFKQ 571 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + + + KR+ ILA ++ + ++ I L +AEK LY+ + + + ++ Sbjct: 572 LEEAQALAAANKRVANILA-KQGVDSSVNASIDESLLSEDAEKALYSALMSAESVVTSAV 630 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + Y +I + ++ I+ FFD V+V +D V+ NR Sbjct: 631 TTQDYTKILSTMATLRSAIDSFFDDVMVMAEDDAVKQNR 669 >gi|225077471|ref|ZP_03720670.1| hypothetical protein NEIFLAOT_02534 [Neisseria flavescens NRL30031/H210] gi|224951220|gb|EEG32429.1| hypothetical protein NEIFLAOT_02534 [Neisseria flavescens NRL30031/H210] Length = 687 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 220/664 (33%), Positives = 344/664 (51%), Gaps = 68/664 (10%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLL 219 L +L D I+++ + + GN T GHRF + I + + D Y + E + Sbjct: 163 HG-LIVLHGSD----IVNVSVLGLQSGNQTLGHRFLSDGEITITNADSYAEQMREQGKVE 217 Query: 220 DPECRRNAIL-----NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 R A + AHRL + V D+ LL+E+ LVEW V F++ +L + Sbjct: 218 ASFAERKAAIQTALEGQAHRLNATV----AADEALLDEVTALVEWPVVLEAGFEEHFLAV 273 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++ NQK F + G L N F+LVSN+Q D + I+QGN RV+ ARL DA Sbjct: 274 PQECLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAE 332 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+K+DQ L+ R+ +L +VV+H KIG+Q ER+ R++ Sbjct: 333 FFYKQDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQ 370 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 + IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A Sbjct: 371 SIAAHIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEA 430 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 IE+H +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R Sbjct: 431 IEQHYQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILR 490 Query: 515 IILENKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILR 561 ++++ +D+ L Q D Q L+ F RL + L + D D++ A+L Sbjct: 491 MLMQYGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLA 549 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 + L + ++ + F + + KR+ +L +K + E+ ++ L Sbjct: 550 KQPRRLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQ 605 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + EK L+A I ++ + L S+ ++ FFD V+V +D V+ NR Sbjct: 606 DEEKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNR 665 Query: 682 LSLL 685 L+LL Sbjct: 666 LNLL 669 >gi|82545927|ref|YP_409874.1| glycyl-tRNA synthetase subunit beta [Shigella boydii Sb227] gi|123558352|sp|Q31V62|SYGB_SHIBS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81247338|gb|ABB68046.1| glycine tRNA synthetase, beta subunit [Shigella boydii Sb227] gi|332089349|gb|EGI94453.1| glycyl-tRNA synthetase beta subunit [Shigella boydii 3594-74] Length = 689 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + E + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYACHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|107099002|ref|ZP_01362920.1| hypothetical protein PaerPA_01000008 [Pseudomonas aeruginosa PACS2] gi|218888754|ref|YP_002437618.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa LESB58] gi|226737058|sp|B7V0P3|SYGB_PSEA8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218768977|emb|CAW24735.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa LESB58] Length = 684 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 216/719 (30%), Positives = 342/719 (47%), Gaps = 66/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAED-LSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + E LS I GL K G+ Y R Y P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALNSLGEAFLSGIEKGL-KAAGLSYAAARFYAAPRRLAVLVEQLAV 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ GP + G +A GF + G+ QI K K + Sbjct: 64 QQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVDL---QQIDKSGPKLRFSQTIAG 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P +L IV ++ ++P PK MRW+ ++RP + L +L +D Sbjct: 121 QPA---AGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQ-WLVMLFGDD---- 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 168 VVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKRVAE 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 228 LAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLD 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+N++ S IV GN +VV RL DA F+K+D+ Sbjct: 288 ANGKLLPRFITVANVE-SKAPENIVSGNEKVVRPRLTDAEFFFKQDKK------------ 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL+ RL +VVF A++GT E+ R+ L IA+ I + RA Sbjct: 335 --------QPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNASRA 384 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 385 GILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPSTLTG 444 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 445 AAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNAAVE 504 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F DRL+ D + + +++ + + L ++ + Sbjct: 505 QYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQA 564 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K E+ + L+ AEK L + +++ + + Sbjct: 565 FRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAESEVA 621 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V ++ Sbjct: 622 PLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADI 680 >gi|319761352|ref|YP_004125289.1| glycyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC] gi|317115913|gb|ADU98401.1| glycyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC] Length = 721 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 215/756 (28%), Positives = 364/756 (48%), Gaps = 97/756 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L L +G+ + Y +P RL +++G+ Sbjct: 6 NLLVELFVEELPPKALQKLGDAFAGVLRDQLVAQGLAAAGAPLTAYASPRRLAAHIEGVL 65 Query: 61 PHSPEK-IEERLGPRVGAGKKAIDGF--------LRSTGLQTISDCQIKK--DPKKGDVY 109 +P+K + ++L P V G A DG L + G + +K+ D K +Y Sbjct: 66 AQAPDKAVSQKLMP-VAVGLAA-DGQPTPALLKKLSALGADASAVAGLKRVHDGKAEVLY 123 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPISAFSWIRPLKSIL 163 + L + + K + AI ++P PK MR W++ H ++RP ++ Sbjct: 124 YESTAQGATLAQGLQKAL-DEAIARLPIPKVMRYQLEDGWTSVH-------FVRPAHGLV 175 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPE 222 + A ++ + + + GN T GHRF A P+ ++ D Y L ++ Sbjct: 176 ALHGA-----GVVPVAVLGLAAGNATQGHRFEAAVQPVVLRDADSYAEQLRAQGAVIAGF 230 Query: 223 CRRNAILNDAHRLAS---AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 R A + R A+ G+ +ED LL+E+ LVE V + F++++L +P+E + Sbjct: 231 AERRAEIVRQLRAAAEKLGGGVRPIEDDALLDEVTALVERPNVLVCQFEREFLAVPQECL 290 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 LT+K NQK F EG L + F++VSNI D GA ++QGN RVV RL DA F+ + Sbjct: 291 ILTMKANQKYFPLLDAEGRLTHRFLVVSNISPQDAGA-VIQGNERVVRPRLADAKFFFDQ 349 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K L R+A+L VV+H ++G+QGERV R+R + K Sbjct: 350 DRK--------------------KTLASRVAQLS--KVVYHNQLGSQGERVERVRAIAKA 387 Query: 400 IAQLI--------------DADVA------LVDRAIVLSKADLCTEIVREFPELQGKIGK 439 I Q + D ++A VD A +L+K DL T++V EFPELQG +G Sbjct: 388 IGQQLFAALAERHELQGTQDGEIAQDWLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGG 447 Query: 440 EYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGS 499 YAV AIE+H KPR + +P + + V+LADK++TL+ + I P+G Sbjct: 448 YYAVNDGLPDEVAHAIEDHYKPRFAGDELPRESVGLVVALADKIETLVGMFGIGNLPTGD 507 Query: 500 KDPYALRRATLGIIRIILENKIDIPLSQF-----------IEDQNLIL--FFHDRLKLYL 546 +DP+ALRR LG+IR+++E + + L I+D + +L F +DRL L Sbjct: 508 RDPFALRRHALGVIRMLMEKDLPLDLGALLAGAVPAFAGRIDDPSALLADFIYDRLAGAL 567 Query: 547 HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 ++ ++A+L L + + + F + + + + KR+ IL +K Sbjct: 568 REQGYSSQEVDAVLALRPQRLALVEKQLAAVRAFSALPESQALAAANKRVSNIL---KKA 624 Query: 607 NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 ++ ++P+ L +AE+ LYA + F + Y L + P++ FFD Sbjct: 625 GGDVHAHVNPELLREQAEQDLYAALQRFVPEADAQFERGDYTASLQTLAVLRAPVDAFFD 684 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 V+VN + ++R NRL LL+ + + V ++ ++ Sbjct: 685 DVMVNAEQLDLRLNRLGLLKTLHEAMNRVADLSRLA 720 >gi|77456237|ref|YP_345742.1| glycyl-tRNA synthetase subunit beta [Pseudomonas fluorescens Pf0-1] gi|123772394|sp|Q3KKF3|SYGB_PSEPF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|77380240|gb|ABA71753.1| glycyl-tRNA synthetase beta chain [Pseudomonas fluorescens Pf0-1] Length = 684 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 207/718 (28%), Positives = 337/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + AE + L+ G+ Y++ Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYESKTVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G++ +I + K + K Sbjct: 65 QPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGVEL---SEIDQSGPKLRYSQNIAGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P PK MRW ++RP + ++ +L ++I Sbjct: 122 P---TASLLPTIVEDSLNDLPIPKRMRWGARKE-----EFVRPTQWLVMLL-----GDQI 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 IDCTILAQKAGRESRGHRFHHPQSVRIGSPSSYLADLRAAYVLADANERREIISKRTEEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ATRQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDA 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-QQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF K+G+ ++ R+ L IA I + + RA Sbjct: 339 AFNDRLQ-------------NVVFQEKLGSVYDKAERVSKLAAYIAARIGGNASWAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 386 LLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPATLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ + Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLNDAVAFAVNA 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + ++ + + L ++ + F Sbjct: 506 FGAKVKAAGLNDAVLEFIFDRLRARYEDEGVGVATYLSVRALKPGSALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K + E+ +Y E LY+ I +Q Sbjct: 566 RKLPEAAALAAVNKRVSNLLS---KVEGSVPTEVQAKYFDNANEFSLYSAIQQADQAVQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y++ L ++ EP++ FFD V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAARQYNESLARLAALREPVDAFFDAVMVNAEDANVRANRYALLARLRGLFLGVADI 680 >gi|119475258|ref|ZP_01615611.1| Glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2143] gi|119451461|gb|EAW32694.1| Glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2143] Length = 697 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 209/726 (28%), Positives = 351/726 (48%), Gaps = 66/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+EI +EE+P K + + + +K G+ Y ++ Y TP RL + + GL Sbjct: 9 DFLVEIGTEELPPTALLKLSNSFTAQVAAGIKTAGLSYTGVQSYATPRRLAIVVSGLDSQ 68 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQT---------ISDCQIKKDPKKGDVYLAVL 113 +PEK GP K A D + T I D I+ D K + L Sbjct: 69 TPEKDVIVWGP---PKKIAFDADGKPTKAAAAFAKKNGVGIDDINIENDGKAEKLVYKSL 125 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + E +L +I+ A+ K+P K MRW + ++RP++ I+ + Sbjct: 126 KAGISATE-LLPSIIQDALDKLPIAKRMRWGAERT-----EFVRPVQWIVMM-----QGS 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDP-ECRRNAILNDA 232 II+ + GN T GHRFH + +++ Y LE + ++ E R+ I Sbjct: 175 HIIECSILGFSAGNTTRGHRFHCDTTLAIENPAAYATLLEHSGHIVPAFETRKAMIRQQV 234 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +G V D+DLL E+ GLVEW GSF+ ++L +P E + ++K +QK F Sbjct: 235 VAEGEKLGGAAVIDEDLLNEVTGLVEWPVALTGSFENRFLEVPPEALISSMKEHQKYFHV 294 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L FI VSNI + D + +++GN RV+ RL DA F Sbjct: 295 ENKDGYLMPHFITVSNIVSRDP-SQVIRGNERVIRPRLSDAAFF---------------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 F D L+ R+ +L +VF A++GT ++ R+ L IA I ++ A Sbjct: 338 ----FETDKKIALETRVEKLK--SIVFQAQLGTLYDKTQRMMGLAASIADSIGSNRAYAS 391 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL +++V EF ++QG G+ YA+ Q E +AI + P+ + +P + Sbjct: 392 RAAELSKADLVSDMVLEFDKMQGIAGRYYALAQGEEEEVANAIRDQYLPKFSGDQLPESL 451 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------- 525 ++LAD+LDT++ + I + P+GSKDP+ALRRATLG++RII+E ++ + L Sbjct: 452 TGCAIALADRLDTIVGIFGIGQPPTGSKDPFALRRATLGVLRIIVEKRLPLDLRVLLKQA 511 Query: 526 ----SQFIEDQNLI----LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 S +NL+ + +R + + + I ++ ++ L I +K + Sbjct: 512 QQQYSHLSAGENLVETVLQYMTERFRAWYEEEQINAEVFMSVSEKGLSQPLDIDQRVKAV 571 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDFGT 636 N F + + + KR+ ILA K + + ++ LL+E +EK L ++ Sbjct: 572 NRFSMLPEAQALAAANKRVSNILA---KLDSQAAIGSVDNTLLVEDSEKNLAELVEQKAQ 628 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + +++Y + L + PI+ FFD V+V VD+ V++NRL+LL+ ++++ L V Sbjct: 629 QLAPLFANRQYSEALTSLAELRVPIDAFFDNVMVMVDEESVKNNRLALLKSLRSLFLEVA 688 Query: 697 NVQKIV 702 ++ +V Sbjct: 689 DISLLV 694 >gi|313669148|ref|YP_004049432.1| glycyl-tRNA synthetase beta subunit [Neisseria lactamica ST-640] gi|313006610|emb|CBN88076.1| putative glycyl-tRNA synthetase beta subunit [Neisseria lactamica 020-06] Length = 687 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 209/660 (31%), Positives = 336/660 (50%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGVPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 INDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + I+++ + + N T GHRF + I +++ D Y + E+ V Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAAQMREQGKVE 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+ L+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLEILVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|312968099|ref|ZP_07782310.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 2362-75] gi|312287358|gb|EFR15267.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 2362-75] Length = 682 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 208/716 (29%), Positives = 335/716 (46%), Gaps = 61/716 (8%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 +EI +EE+P + AE + L G+ + ++ + P RL L + L+ P+ Sbjct: 1 MEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPD 60 Query: 66 KIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 REIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVKGE 118 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 119 STEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVIPA 168 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLAS 237 + I + GHRF + + D Y L E V+ D E R+ I DA A Sbjct: 169 TILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAAR 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G Sbjct: 229 KIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D I+ GN +VV RL DA F F Sbjct: 289 KLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF--------------------F 327 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +L Sbjct: 328 NTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL 385 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ + Sbjct: 386 SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACAL 445 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 ++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 446 AIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYG 505 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++I F R + + D D I+A+L +K ++ F + Sbjct: 506 DKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRT 565 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 566 LEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYF 622 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 623 AEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 678 >gi|260886751|ref|ZP_05898014.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|330839432|ref|YP_004414012.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|260863603|gb|EEX78103.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|329747196|gb|AEC00553.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] Length = 688 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 224/731 (30%), Positives = 347/731 (47%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA ++L LKE + + +R TP RL L ++GL+ Sbjct: 4 DLLLEIGTEEIPAHAMPGMLKELGENAKKALKELRLAHGAVRTLGTPRRLALVVEGLAEK 63 Query: 63 SPEKIEERLGPRV-----GAGK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE+ GP V AGK KA +GF R G++ D ++ G VY A++ + Sbjct: 64 QEDVAEEKRGPSVQVAFDAAGKPTKAAEGFARGQGIKA-QDLVVRD----GYVY-ALVEE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 E VL ++P I +P P SMRW F +IRPL+ ++ + ++I Sbjct: 118 AGESAEKVLAKMLPELISGLPLPNSMRWGDLD-----FRFIRPLRWLVALY-----GDRI 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +L + GN + GHRF + ++ HY E+A V++DP R+ I Sbjct: 168 VPFELACVKSGNTSRGHRFLSTGDFTIEDAAHYEEACEKAFVIVDPARRKALIEEGLVEA 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G +LLEE++ LVE+ GSF+ KYL LP + + ++ +Q+ F ++ Sbjct: 228 AKAHGGTAEITPNLLEEVLYLVEYPTALAGSFEDKYLALPPDAVITPMRDHQRYFPVKSA 287 Query: 296 EGVLANCFILVSNIQASDGGA----AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F+ V N GG + GN RV+ ARL DA F Sbjct: 288 DGKLLPLFLTVRN-----GGKEYLETVQHGNERVLRARLADAQFF--------------- 327 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 F+ D K L + + +L VVF +GT ++ R+ L KIA IDA+ A Sbjct: 328 -----FDEDRKKSLAEHLEKLKT--VVFQEGLGTVYDKSLRLEKLAGKIADAIDANDAEK 380 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +LSKADL T +V EF ELQG +GKEYA L E AI+EH PR + Sbjct: 381 KAAMRAALLSKADLVTGMVTEFTELQGVMGKEYARLDGEGEDVALAIDEHYMPRFAGDAQ 440 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + VSLADK+D ++ ++ P+GS+DP+ALRR LG++ I+E + I L Sbjct: 441 PKTRAGLVVSLADKMDNIVATFSRGLIPTGSQDPFALRRQALGMVHSIIEAGVAISLHDL 500 Query: 529 IE-----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ ++ F RLK L + IR+D+ +A+L D++ ++ Sbjct: 501 VDWTMDLLKITDAAVCEKMQADVADFMRLRLKNVLAEEGIRYDIADAVL-GNVDDVRRVL 559 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K + E ++ + + R+ + A EK + + + EK L Sbjct: 560 LAAKAVREQLAAPGMADAVQAFVRVANLAAKAEKGE----VHVDAALFETDEEKELMKAY 615 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + ++ + D + EPI FFD V+V DD ++R NRLSLL+ I ++ Sbjct: 616 TSARSAAESLIEAHDFVGAIDDFKDLAEPINAFFDAVMVMADDEKIRRNRLSLLKGIDDL 675 Query: 692 ILIVINVQKIV 702 + + KIV Sbjct: 676 LREAADFSKIV 686 >gi|319939735|ref|ZP_08014092.1| glycyl-tRNA synthetase beta subunit [Streptococcus anginosus 1_2_62CV] gi|319811073|gb|EFW07384.1| glycyl-tRNA synthetase beta subunit [Streptococcus anginosus 1_2_62CV] Length = 679 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 208/715 (29%), Positives = 358/715 (50%), Gaps = 90/715 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + + + + TP RL + + LS Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKIAAFLTDNRLTFDKIEMFSTPRRLAVRVSNLSEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QTDLTEDFKGPSKKIALDADGHFTKAAQGFVRGKGL-TVEDITFRE--VKGEEYVYVTKQ 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +E+++ + V + + +P +M W T + F +IRP+ ++ +L E Sbjct: 121 EIGKPVEELIDGVADV-LTSLSFPVNMHWGT-----NTFEYIRPVHTLTVLLDDES---- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++L +I G + GHRF H +K+QS D Y DL + V+ P R N IL+ Sbjct: 171 -FLMNLFDIESGRTSRGHRFLG-HEVKIQSADSYEEDLRKVFVIASPMERENMILDQIKE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + + D+DLL+E++ L+E+ F+G FD++YL +PEE++ ++K NQ+ FV R Sbjct: 229 IEKMHNVHVEIDEDLLDEVLNLIEYPTAFIGRFDERYLDVPEEVLVTSMKVNQRYFVVRN 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L F+ + N A + +V+GN +V+ ARLEDA FW+ DQ + +S L E Sbjct: 289 ENGKLLPYFVSIRNGNA-EHLENVVKGNQKVLVARLEDAEFFWREDQRLV--ISDLVEK- 344 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQLIDADVALV 411 + +V FH KIG+ E R ++I L + AQL ++ V Sbjct: 345 -------------------LKNVTFHEKIGSLAEHMERTAKIAALLAEKAQLSKQEMKDV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 386 ARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENTAVAKAIREHYLPTASDGELPDT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 K+ +S+ADK+DT+++F+++ PSGS DPYALRRAT G++RI+ + I L + +E+ Sbjct: 446 KVGAILSIADKMDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWHIALDELVEE 505 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ FF R++ + D D+ D++ ++L N + + L++ Sbjct: 506 IYALQFDSLTYSDKEQVLDFFRARIE-KMMDSDVPKDIVSSVL---NSSTFVVRYLVEAA 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA-EKRLYAVIS---- 632 + A+ + F S + + ++ + EK + + + L A EK L+A + Sbjct: 562 SLLAEKAQEDSFKSSVESLARVFNLAEKAE---TASVVDESLFENAEEKALHAAVENLTL 618 Query: 633 --DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 D +I++ L ++ I+ FFD +V +D +R NRL+L+ Sbjct: 619 SDDLADNIEQ-------------LFALSPVIDAFFDNTMVMAEDEAIRANRLALI 660 >gi|326693036|ref|ZP_08230041.1| glycyl-tRNA synthetase subunit beta [Leuconostoc argentinum KCTC 3773] Length = 686 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 219/732 (29%), Positives = 346/732 (47%), Gaps = 78/732 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + ++ Y TP RL + L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTPSEAQLVTRTAAFLAEHRLAVGEIKAYSTPRRLAVQLLDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G +D ++ D Y+ + Sbjct: 61 AESETLSEEKRGPSIDRAKDEQGNWTKAAQGFARGQG-------TTPEDFEERDGYVWLT 113 Query: 114 RK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + P ++L I + ++ + M+W+ +AF ++RP++ ++ +L Sbjct: 114 KTTPGVPAAEILAQIGDEVVAQMKFSTYMKWAN-----NAFLYVRPIRWLVALL-----D 163 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K++D + ++ IT GHRF + + + + D Y+ L A VL+D E RR I Sbjct: 164 DKVLDFSILDVQTDRITRGHRFLSNEQVTIPTADDYVETLRAAHVLVDAEERRATISQQL 223 Query: 233 HRLASAVG--LELVEDK--DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +A G L+L DK DLLEE+ +VEW F GSFD+KYL +P++++ +++ +Q+ Sbjct: 224 AAIAQENGWVLQLDSDKSQDLLEEVNNIVEWPTAFAGSFDEKYLAVPDDVLMTSMREHQR 283 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + G L F+ V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 284 FFYVTDQSGQLLPHFLSVRNGN-DDHLGDVIAGNEKVLVARLEDAEFFYHEDQQ------ 336 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---D 405 K + MA+++ L VFH KIGT E + R+ +L ++A + D Sbjct: 337 --------------KTIADYMAKVEKL--VFHEKIGTVYEHMQRVGLLAAELADKLGFDD 380 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 A + RA + K DL T +V EF ELQG +G+ YA L EN + A+ EH P Sbjct: 381 TKKADLARAADIYKFDLMTGMVGEFDELQGIMGEHYAQLFGENTAVATAVREHYMPTSAA 440 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 V + I +++ADKLDTL++F+A N PSGS DPY LRRA GI+R + + I L Sbjct: 441 GEVAQSDIGAVLAIADKLDTLVSFFAANLVPSGSNDPYGLRRAATGIVRTLQARQWRIAL 500 Query: 526 SQFIE-------------DQNLI-LFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTI 570 + +E D I F DR++ D R DL+ A N +++ + Sbjct: 501 APLLESFIAKTGDVSSHADTTAIRAFILDRVRKLALDAGTRQDLVAAGTANVVNLDVVYV 560 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ L + + S R+ + LA++ + + P EAE LYA Sbjct: 561 AQRVQTLAQHADDTNFRDVIASLTRVSR-LAVK----YDTDATVDPALFENEAEVALYAA 615 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 H + +Q L ++ PI +FD +VNVDD V++NR + L I Sbjct: 616 TQSLDLHTLVLAGSEAVYQA---LANLQAPIAAYFDATMVNVDDEAVKNNRYAQLHLINR 672 Query: 691 IILIVINVQKIV 702 +I + +++KIV Sbjct: 673 LISGLGDLEKIV 684 >gi|319790592|ref|YP_004152225.1| glycyl-tRNA synthetase, beta subunit [Thermovibrio ammonificans HB-1] gi|317115094|gb|ADU97584.1| glycyl-tRNA synthetase, beta subunit [Thermovibrio ammonificans HB-1] Length = 689 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 222/726 (30%), Positives = 368/726 (50%), Gaps = 68/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI EE+PA E L L L+ + ++ + TP RL + Sbjct: 5 NLLLEIGCEELPAHFVTSGIEFLKEKLPQELESNFLPPSSVEVFGTPRRLIAVAYDVPEV 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E +GP + G +A +GF RS G+ ++ P K Y+AV R Sbjct: 65 QPDREELLVGPSLKAAFDTEGRPTRAAEGFARSKGVSVEELITVENPPGKRGTYVAVKRV 124 Query: 116 PK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K R +VL+ ++P I +P+ KSMRW T + RP++ I + E Sbjct: 125 VKGRSAVEVLRELLPKLILSIPFKKSMRWGTKR-----IRFGRPIRWIAAVYGGEP---- 175 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ I NI+YGHRF +P P V+ ++ LEE V+ D E R IL+ A Sbjct: 176 -VEFEIDGIVSSNISYGHRFLSPEPFVVEEPAEHLEKLEERFVVADQEKRCAQILDGAVS 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA VG L++D++LLEE+ LVE+ +GSF++++L LP+E+ + +K +QK F Sbjct: 235 LARRVGGHLLKDEELLEEVTNLVEFPYPILGSFEEEFLKLPKEVPVVVMKDHQKFFAVTD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N F+ V+NI+ D + + +G +V+ ARL+DAL F Sbjct: 295 EAGNLKNYFVGVANIKPVDD-STVCRGYEKVLRARLKDALFF------------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDR 413 FN D K L++R+ +L+ ++FH K+GT ++ R+ L +A + R Sbjct: 336 --FNEDRKKRLEERVPKLE--GIIFHEKLGTMLQKTKRLEGLAPWVAGVTGLGSEGESRR 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL TE+V EFPELQG +GK YA+L E + AIEEH PR ++V Sbjct: 392 AAHLCKADLLTEMVNEFPELQGTMGKYYALLDGEPEAVAVAIEEHYLPRFSGDSVAKTAA 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-------S 526 + +S+A+K+D L F + KP+GS DP+ALRR LG+I+ ++EN++ + + + Sbjct: 452 GVALSVAEKVDNLTGFIGVGLKPTGSADPFALRRNALGLIQTLIENELFLDILEAAREAA 511 Query: 527 QFIEDQNLIL----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + +Q + L F +RLK +L ++ R D +EA+L +D + K Sbjct: 512 RLYGEQGIELIREAPEETAEFVKERLKNFLKEKGFRPDTLEAVLAVTHDPYDAFLR-AKA 570 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + + + + E L++ +R+ I+ + E + + +PQ E E+ L+ + + Sbjct: 571 VEKLRENPEFEATLITMRRVVNIIP----EGFEAT-DFTPQG---EFEENLFNAFKELQS 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + + Y + + S+ ++ FFD V+V D +VR+ RLSLL+ I + +L +I Sbjct: 623 KLNKLISERNYTEALLQVSSLKPAVDAFFDNVMVMDRDPQVRNRRLSLLKTIADQLLKLI 682 Query: 697 NVQKIV 702 + K+ Sbjct: 683 DFSKLA 688 >gi|15595206|ref|NP_064728.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PAO1] gi|25009339|sp|Q9I7B8|SYGB_PSEAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|9945826|gb|AAG03398.1|AE004440_8 glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa PAO1] Length = 684 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 216/719 (30%), Positives = 342/719 (47%), Gaps = 66/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAED-LSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + E LS I GL K G+ Y R Y P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALNSLGEAFLSGIEKGL-KAAGLSYAAARFYAAPRRLAVLVEQLAV 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ GP + G +A GF + G+ QI K K + Sbjct: 64 QQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVDL---QQIDKSGPKLRFIQTIAG 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P +L IV ++ ++P PK MRW+ ++RP + L +L +D Sbjct: 121 QPA---AGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQ-WLVMLFGDD---- 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 168 VVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKRVAE 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 228 LAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLD 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+N++ S IV GN +VV RL DA F+K+D+ Sbjct: 288 ANGKLLPRFITVANVE-SKAPENIVSGNEKVVRPRLTDAEFFFKQDKK------------ 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL+ RL +VVF A++GT E+ R+ L IA+ I + RA Sbjct: 335 --------QPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNASRA 384 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 385 GILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPSTLTG 444 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 445 AAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNAAVE 504 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F DRL+ D + + +++ + + L ++ + Sbjct: 505 QYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQA 564 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K E+ + L+ AEK L + +++ + + Sbjct: 565 FRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAESEVA 621 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V ++ Sbjct: 622 PLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADI 680 >gi|330823227|ref|YP_004386530.1| glycyl-tRNA synthetase subunit beta [Alicycliphilus denitrificans K601] gi|329308599|gb|AEB83014.1| Glycyl-tRNA synthetase beta subunit [Alicycliphilus denitrificans K601] Length = 721 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 216/756 (28%), Positives = 364/756 (48%), Gaps = 97/756 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG-L 59 + L+E++ EE+P + K + + +L L +G+ + Y +P RL +++G L Sbjct: 6 NLLVELFVEELPPKALQKLGDAFAGVLRDQLVAQGLAAAGAPLTAYASPRRLAAHIEGVL 65 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGF--------LRSTGLQTISDCQIKK--DPKKGDVY 109 + S + + ++L P V G A DG L + G + +K+ D K +Y Sbjct: 66 AQASDKAVSQKLMP-VAVGLAA-DGQPTPALLKKLSALGADASAVAGLKRVHDGKAEVLY 123 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPISAFSWIRPLKSIL 163 + L + + K + AI ++P PK MR W++ H ++RP ++ Sbjct: 124 YESTAQGATLAQGLQKAL-DEAIARLPIPKVMRYQLEDGWTSVH-------FVRPAHGLV 175 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPE 222 + A ++ + + + GN T GHRF A P+ ++ D Y L ++ Sbjct: 176 ALHGA-----GVVPVAVLGLAAGNATQGHRFEAAVQPVVLRDADSYAEQLRAQGAVIAGF 230 Query: 223 CRRNAILNDAHRLAS---AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 R A + R A+ G+ +ED LL+E+ LVE V + F++++L +P+E + Sbjct: 231 AERRAEIVRQLRAAAEKLGGGVRPIEDDALLDEVTALVERPNVLVCQFEREFLAVPQECL 290 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 LT+K NQK F EG L + F++VSNI D GA ++QGN RVV RL DA F+ + Sbjct: 291 ILTMKANQKYFPLLDAEGRLTHRFLVVSNISPQDAGA-VIQGNERVVRPRLADAKFFFDQ 349 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K L R+A+L VV+H ++G+QGERV R+R + K Sbjct: 350 DRK--------------------KTLASRVAQLS--KVVYHNQLGSQGERVERVRAIAKA 387 Query: 400 IAQLI--------------DADVA------LVDRAIVLSKADLCTEIVREFPELQGKIGK 439 I Q + D ++A VD A +L+K DL T++V EFPELQG +G Sbjct: 388 IGQQLFAALAERHELQGTQDGEIAQDWLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGG 447 Query: 440 EYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGS 499 YAV AIE+H KPR + +P + + V+LADK++TL+ + I P+G Sbjct: 448 YYAVNDGLPDEVAHAIEDHYKPRFAGDELPRENVGLVVALADKIETLVGMFGIGNLPTGD 507 Query: 500 KDPYALRRATLGIIRIILENKIDIPLSQF-----------IEDQNLIL--FFHDRLKLYL 546 +DP+ALRR LG+IR+++E + + L I+D + +L F +DRL L Sbjct: 508 RDPFALRRHALGVIRMLMEKDLPLDLGALLAGAVPAFAGRIDDPSALLADFIYDRLAGAL 567 Query: 547 HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 ++ R ++A+L L + + + F + + + + KR+ IL +K Sbjct: 568 REQGYRSQEVDAVLALRPQRLALVEKQLAAVRAFSALPESQALAAANKRVSNIL---KKA 624 Query: 607 NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 ++ ++P+ L +AE+ LYA + F + Y L + P++ FFD Sbjct: 625 GGDVHAHVNPELLREQAEQDLYAALQRFVPEADAQFERGDYTASLQTLAVLRAPVDAFFD 684 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 V+VN + ++R NRL LL+ + + V ++ ++ Sbjct: 685 DVMVNAEQLDLRLNRLGLLKTLHEAMNRVADLSRLA 720 >gi|253997240|ref|YP_003049304.1| glycyl-tRNA synthetase subunit beta [Methylotenera mobilis JLW8] gi|253983919|gb|ACT48777.1| glycyl-tRNA synthetase, beta subunit [Methylotenera mobilis JLW8] Length = 703 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 360/731 (49%), Gaps = 64/731 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + S L LK +G+ N + + TP RL ++ ++ Sbjct: 5 NLLVELFVEELPPKALKKLGDAFSSTLFETLKLQGLSADNSVVTSFATPRRLAAHITAIA 64 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK--DPKKGDVYLA 111 + +K I ++L P G A+ L GL + Q+ K D K ++L Sbjct: 65 AQAKDKQISQKLMPVSVGLDANGNATPALIKRLNGMGLDESAVSQLTKQMDGKNEALFLE 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V +K +++D L+ + AIQK+P PK M + S+ +++RP ++ + ++ Sbjct: 125 VTQK-GAVLKDGLQKAIEEAIQKLPIPKVMTYQLADG-WSSVNFVRPAHGLIALHGSD-- 180 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 I+ + GN T GHRF A + +++ D Y LE E V+ RR I+ Sbjct: 181 ---IVATSALGLSAGNQTQGHRFEAKSATVVIKNADSYAEQLETEGAVIASFAERRAEIV 237 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A+ GL+ ++D LL+E+ LVE V +G F+ ++L +P+E + LT+K NQK Sbjct: 238 RQLTAAAAKEGLKPIDDDALLDEVTALVERPNVVLGQFEAEFLEVPQECLILTMKANQKY 297 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F L N F++VSNI +D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 FPLLDSNNKLTNKFLIVSNICPADP-SAVIGGNERVVRPRLADAKFFFDQDRK------- 349 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K L+ R + L+ VV+H K+G+QG+R R+ + I + + Sbjct: 350 -------------KTLESRTSSLE--KVVYHNKLGSQGQRSQRVVAIANAIGKQLGGAEL 394 Query: 410 LVDRAIVL--SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A+ SK DL T++V EFPELQG +G+ YA + + AIE+H KPR ++ Sbjct: 395 AAKAALAAQLSKTDLITDMVGEFPELQGIMGRYYAQHEGLDNDVAFAIEDHYKPRFAGDD 454 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P N++ ITV+LADKL+TL+ ++I EKP+G KDP+ALRR LGIIR+++E+K+ + Q Sbjct: 455 LPRNQVGITVALADKLETLVGLFSIGEKPTGDKDPFALRRQALGIIRMLIESKLPLAFEQ 514 Query: 528 FIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I D Q + F DRL + L + ++A+L + L + Sbjct: 515 LIHDVLAAFEHDAANTAATVQAIKEFCFDRLSVNLRENGATAQEVDAVLSLDPALLSEVP 574 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + F A+ + KR+ IL +K EI +++ L AE L + Sbjct: 575 QRLAAVRTFAELAEAPALAAANKRVSNIL---KKVEDEIQAQVNVSLLQEAAEVALNNAL 631 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ Y L ++ P++ FFD V+VN +D ++ NRL LL + Sbjct: 632 IAVKPEADKQFENGDYTSSLKALAALKAPVDDFFDNVMVNAEDAALKANRLGLLATLHQT 691 Query: 692 ILIVINVQKIV 702 + V ++ K+ Sbjct: 692 MNRVADLSKLA 702 >gi|317128323|ref|YP_004094605.1| glycyl-tRNA synthetase subunit beta [Bacillus cellulosilyticus DSM 2522] gi|315473271|gb|ADU29874.1| glycyl-tRNA synthetase, beta subunit [Bacillus cellulosilyticus DSM 2522] Length = 700 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 212/729 (29%), Positives = 360/729 (49%), Gaps = 71/729 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL EI EE+PAR A L+ + L + + Y+ +++Y TP RL + + GL Sbjct: 8 FLFEIGLEEMPARFVTTAMNQLAEKVEKWLLDNRLNYEAVQRYSTPRRLAIKINGLDDRQ 67 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP G KA +GF R G+ ++SD K+ KG+ Y+ V + Sbjct: 68 ADIEEEAKGPSKKIAQDADGNWTKAAEGFARGQGV-SVSDLFFKE--IKGEEYVFVNKFM 124 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K ++L+ + VAI + +PK+MRW + F ++RP+K ++ + +E + Sbjct: 125 KGTATNELLQDLKEVAIS-LQFPKNMRWGSLQ-----FRYVRPIKWLVALYGSE-----V 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ +P N+TYGHRF I + + Y L V+ DPE R+ AI + + Sbjct: 174 IPFEIAHVPSSNVTYGHRFLGEE-ITLSEANEYENLLLSQYVIADPEQRKEAIRSQVKYI 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G + D+DLLEEI LVE+ +G+FD+++L +P +++ +++ +Q+ F + Sbjct: 233 GEQEGYVIPVDEDLLEEINNLVEYPTSLIGNFDERFLMVPSDVLITSMREHQRYFPVKDS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V N + +GN +V+ ARL DA F++ D Sbjct: 293 NGNLLPHFITVRNGDHRHL-ENVQKGNEKVLRARLADAEFFYEED--------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 L +PLD + RL+ +V+H ++G+ G++V RI+ L A+ L + ++ V Sbjct: 337 -----LKQPLDANLERLE--SIVYHEELGSIGDKVRRIQGLATTFAEWNGLNEEELKTVL 389 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R LSKADL T +V EFPEL+G++G+EYA E+ I EH P+ + +P Sbjct: 390 RVAQLSKADLVTHMVGEFPELEGRMGEEYARKSGEDEKVAQGIYEHYLPKQAGDQLPKTS 449 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 + VS+ADK+DT++ ++I P+GS+DP+ LRR T G+I+I L NK I + ++ Sbjct: 450 VGALVSVADKVDTIVTSFSIGLIPTGSQDPHGLRRQTAGVIQIFLANKWKINVLDVFKEA 509 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L+ F R+K L D+ IR+D+++A++ + + T+VD Sbjct: 510 LQLAEKHGLLKRDKETVLEELVEFIKLRVKNILQDKGIRYDIVDAVMNTDIGEITTLVDK 569 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L + +K + + R+ I A + K N+ ++++ +AEK L+ + + Sbjct: 570 ANVLQSKINETSFKKLVEAFSRVTNI-AKKAKDNQH--MDVNDSLFTEKAEKDLFKMNAA 626 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + D L + I +FD V+V DD ++ NRL+ + +I Sbjct: 627 VSKQMNDLLKSGNVEAAFDELKQLEPYIHDYFDHVMVMTDDTALKTNRLNQMNEAAKLIT 686 Query: 694 IVINVQKIV 702 Q IV Sbjct: 687 QFAEFQSIV 695 >gi|225872264|ref|YP_002753719.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium capsulatum ATCC 51196] gi|254781841|sp|C1F1J0|SYGB_ACIC5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225792055|gb|ACO32145.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium capsulatum ATCC 51196] Length = 706 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 212/739 (28%), Positives = 355/739 (48%), Gaps = 72/739 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG 58 M +FL EI EEIPARM A +L+ + LL+ E ++ + + +Y TP RL + + G Sbjct: 1 MAEFLFEIGLEEIPARMIAAAESELARRVAELLQREDLLAEGHAVTRYSTPRRLAVLVTG 60 Query: 59 LSPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++ E+ GP + G A F + G++ ++ Q PK V + Sbjct: 61 VKAAQADREEQLTGPAWSIAFKDGQPTPAAQAFAKKAGVE-VAALQKVTTPKGEYVGASS 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +RK R ++L +P I + WPK+M W ++RP++ ++ +L Sbjct: 120 VRK-GRAANEILLEALPKEIAAIYWPKNMYWRAGKPE----RFVRPVQWMVALL-----G 169 Query: 173 EKIIDLDLKEIPCGNITYGHR-FHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++I ++ + N+TYGHR H P+ + + Y LE A V D E RR+ I Sbjct: 170 EQVIPVEFAGVTAANVTYGHRILHGDAPVAIPAPMEYAATLEAAKVQADVEARRHRIRKA 229 Query: 232 AHRLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + V G ED+ L++ + L EW V +GSF+ ++L LPEE++ ++ +QK F Sbjct: 230 LDHVTRTVPGARWREDEALVDAVTHLTEWPSVLLGSFETEFLALPEEVLVTVMRDHQKYF 289 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQN-NLPNLS 348 G LA F+ N + SD AAI++ GN RV+ AR DA FW DQ +L N Sbjct: 290 AVEDAAGKLAPHFLTALNTEPSDQAAAIIRHGNERVLRARFNDARFFWTVDQKISLAN-- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLI--- 404 RL+ML V FH ++G+ ++ R + K++ + Sbjct: 348 ----------------------RLEMLQSVTFHKELGSYHQKTHTTREIAVKLSAQVRHA 385 Query: 405 --DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D A + RA+ L+K DL TE+V+EF ELQG +G YA Q E + AI P Sbjct: 386 GTSVDEAALLRAVELAKTDLTTELVKEFTELQGIVGGLYARAQGEGEAVAQAIYWQYSPA 445 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P + LAD++ T++ +AI +P+GSKDP+ALRRA +++I+ E K+ Sbjct: 446 SMDDPIPPTLEGQLLGLADRIGTIVEMFAIGLEPTGSKDPFALRRAANAVVKILAEGKLP 505 Query: 523 IPLSQFI--------------EDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNL 567 + L + + + ++ F +RL+ Y+ + R+D++ A+L ++ Sbjct: 506 VTLDRLLNAAEESSKVENAAASREKVMAFLKERLEFYMREVLGYRYDVVNAVLAAGAHDV 565 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL--AIEEKKNREISLEISPQYLLL--EA 623 + + + L+ S + KR IL A E+ E SL LL A Sbjct: 566 VDTIARAEALSAVRGSEDFAAIAAAFKRSKNILRQAAEKAGVAEDSLSADVDAALLPEPA 625 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+L+ + ++E Y + + ++ +++FFD+V+V V+D +R NRL+ Sbjct: 626 EKQLHEAAAKLAPVVEELRAKNDYRAALEQIATLRPQVDLFFDKVMVMVEDDLLRHNRLA 685 Query: 684 LLQYIKNIILIVINVQKIV 702 L+QY+ + + +IV Sbjct: 686 LIQYVLRSFSSIADFSEIV 704 >gi|283835937|ref|ZP_06355678.1| glycyl-tRNA synthetase, beta subunit [Citrobacter youngae ATCC 29220] gi|291068114|gb|EFE06223.1| glycyl-tRNA synthetase, beta subunit [Citrobacter youngae ATCC 29220] Length = 689 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 338/718 (47%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + TP RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGIAHGNVEWFATPRRLALKVANLAQAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESAETLLPNMIATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + S D Y L E V+ D R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDSADQYPEILRERGKVIADYAERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F+ K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEDKFLAVPSEALVHTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FYTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L+ I Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLNLTTLILKASRL 510 Query: 530 -----EDQNLI----LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + N++ F +R + + D D+I ++L + +K + F Sbjct: 511 YGDKLTNDNVLDDVETFMLNRFRAWYQDMGYSIDVILSVLELRPTEPVDFDARVKAVTHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ IL+ K+ ++ E+ P L E+ L ++ I+ Sbjct: 571 RSLPDAASLAAANKRVSNILS---KRVDVLNDEVHPALLTEPTEQVLAFKMAVVRDRIKP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 H Y + L S+ +P++ FF+ V+VN ++++VR NRL+LL ++ + L V ++ Sbjct: 628 LCQHFLYQEALTELASLRQPVDDFFENVMVNAENQDVRINRLTLLSKLRALFLEVADI 685 >gi|240013283|ref|ZP_04720196.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI18] gi|240120355|ref|ZP_04733317.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID24-1] Length = 687 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 211/673 (31%), Positives = 343/673 (50%), Gaps = 60/673 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + R + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGRQ-DVYAYEYVQTGRPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + + +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 375 HIAKALGADAAAAGRAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGAVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 Query: 686 QYIKNIILIVINV 698 + + V ++ Sbjct: 670 NRLAGQMNAVADI 682 >gi|200388817|ref|ZP_03215429.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605915|gb|EDZ04460.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 689 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 213/722 (29%), Positives = 338/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + S D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDSADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|313647572|gb|EFS12022.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri 2a str. 2457T] Length = 682 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 208/716 (29%), Positives = 335/716 (46%), Gaps = 61/716 (8%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 +EI +EE+P + AE + L G+ + ++ + P RL L + L+ P+ Sbjct: 1 MEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPD 60 Query: 66 KIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 REIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVKGE 118 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 119 STEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVIPA 168 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLAS 237 + I + GHRF + + D Y L E V+ D E R+ I DA A Sbjct: 169 TILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAAR 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G Sbjct: 229 KIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D I+ GN +VV RL DA F F Sbjct: 289 KLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF--------------------F 327 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +L Sbjct: 328 NTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL 385 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ + Sbjct: 386 SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACAL 445 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 ++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 446 AIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYG 505 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++I F R + + D D I+A+L +K ++ F + Sbjct: 506 DKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRT 565 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 566 LEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYF 622 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 623 AEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 678 >gi|168465046|ref|ZP_02698938.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818524|ref|ZP_02830524.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|195632214|gb|EDX50698.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205344573|gb|EDZ31337.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088072|emb|CBY97834.1| Glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 689 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 339/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|116053728|ref|YP_788163.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa UCBPP-PA14] gi|254237749|ref|ZP_04931072.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa C3719] gi|254243121|ref|ZP_04936443.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 2192] gi|122262137|sp|Q02V73|SYGB_PSEAB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|115588949|gb|ABJ14964.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa UCBPP-PA14] gi|126169680|gb|EAZ55191.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa C3719] gi|126196499|gb|EAZ60562.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 2192] Length = 684 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 216/719 (30%), Positives = 342/719 (47%), Gaps = 66/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAED-LSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + E LS I GL K G+ Y R Y P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALNSLGEAFLSGIEKGL-KAAGLSYAAARFYAAPRRLAVLVEQLAV 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ GP + G +A GF + G+ QI K K + Sbjct: 64 QQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVDL---QQIDKSGPKLRFSQTIAG 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P +L IV ++ ++P PK MRW+ ++RP + L +L +D Sbjct: 121 QPA---AGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQ-WLVMLFGDD---- 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 168 VVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKRVAE 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 228 LAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLD 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+N++ S IV GN +VV RL DA F+K+D+ Sbjct: 288 ANGKLLPRFITVANVE-SKAPENIVSGNEKVVRPRLTDAEFFFKQDKK------------ 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL+ RL +VVF A++GT E+ R+ L IA+ I + RA Sbjct: 335 --------QPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNAARA 384 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 385 GILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPSTLTG 444 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 445 AAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNAAVE 504 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F DRL+ D + + +++ + + L ++ + Sbjct: 505 QYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQA 564 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K E+ + L+ AEK L + +++ + + Sbjct: 565 FRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAESEVA 621 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V ++ Sbjct: 622 PLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADI 680 >gi|90413726|ref|ZP_01221714.1| glycyl-tRNA synthetase beta subunit [Photobacterium profundum 3TCK] gi|90325195|gb|EAS41692.1| glycyl-tRNA synthetase beta subunit [Photobacterium profundum 3TCK] Length = 689 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 219/720 (30%), Positives = 344/720 (47%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE S LK +++Q + + TP RL L + L+ Sbjct: 5 NFLIELGTEELPPKALRTLAEAFSSNFEAELKAAALVHQGIEWFATPRRLALKVTALATG 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + A KA G+ R G+ T+ K +KG+ L Sbjct: 65 QADSVVEKRGPAISAAFDAEGNPTKAAQGWARGNGI-TVEQADTLK-TEKGEWLLYKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L + A+ K+P PK MRW +IRP+K++ +L E + I Sbjct: 123 KGKPAQELLSGLAAAALAKLPIPKPMRWGNNE-----IQFIRPVKTLTMLLGDELIEGNI 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + D I GHRF + + D Y LEE V+ + E R+ IL A + Sbjct: 178 LGAD-----SARIIRGHRFMGEAEFTIDNADQYPAILEERGKVMANYEARKAIILEGAKK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG + +L+EE+ LVEW V SF++ +L +P E + T+K +QK F Sbjct: 233 AALEVGGIADLEDELVEEVTSLVEWPVVLTASFEENFLNVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V+NI++ D I++GN +VV RL DA F+K D+ Sbjct: 293 AEGNLIPKFIFVTNIESKDP-RQIIEGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV RA Sbjct: 340 --------RPLVDRLPELET--AIFQKQLGTIKDKTDRITELAGYIAEKIDADVTNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEDVALALYEQYMPRFAGDELPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------S 526 V++ADK+DTL+ + I + P GS DP+ALRRA LG++RII+E ++ L + Sbjct: 450 AAVAMADKIDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKGYNLDLVDLIAKARA 508 Query: 527 QF--------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 QF +ED ++I F R + + D D+I A+L +K ++ Sbjct: 509 QFGDKLTNTNVED-DVIDFMLGRFRAWYQDEGHSVDVILAVLALRPTQPADFDKRVKAVS 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F S E + KR+ ILA K + E+ L + L+ AEK L + + Sbjct: 568 HFRSLDAAESLAAANKRVGNILA---KFDGELPLAVDSSLLIENAEKALAEKVEAMIAAL 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y Q L ++ EP++ FFD V+V DD +++ NRL++L ++N L V ++ Sbjct: 625 APVFAEGNYQQALSELATLREPVDAFFDNVMVMADDEKLKVNRLTMLNLLRNEFLKVADI 684 >gi|309787763|ref|ZP_07682374.1| glycyl-tRNA synthetase beta subunit [Shigella dysenteriae 1617] gi|308924513|gb|EFP70009.1| glycyl-tRNA synthetase beta subunit [Shigella dysenteriae 1617] Length = 682 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 208/716 (29%), Positives = 335/716 (46%), Gaps = 61/716 (8%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 +EI +EE+P + AE + L G+ + ++ + P RL L + L+ P+ Sbjct: 1 MEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPD 60 Query: 66 KIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 REIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVKGE 118 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 119 STEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVIPA 168 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLAS 237 + I + GHRF + + D Y L E V+ D E R+ I DA A Sbjct: 169 TILGIQSDRVIRGHRFMGEPEFAIDNADQYPEILRERGKVIADYEERKAKIKADAEEAAR 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G Sbjct: 229 KIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D I+ GN +VV RL DA F F Sbjct: 289 KLLPNFIFVANIESKDQ-QQIISGNEKVVRPRLADAEFF--------------------F 327 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +L Sbjct: 328 NTDRKKRLEDNLPRLQT--VLFQLQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL 385 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ + Sbjct: 386 SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACAL 445 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 ++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 446 AIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYG 505 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++I F R + + D D I+A+L +K ++ F + Sbjct: 506 DKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRT 565 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 566 LEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYF 622 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 623 AEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 678 >gi|329117146|ref|ZP_08245863.1| glycine--tRNA ligase, beta subunit [Streptococcus parauberis NCFD 2020] gi|326907551|gb|EGE54465.1| glycine--tRNA ligase, beta subunit [Streptococcus parauberis NCFD 2020] Length = 679 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 212/702 (30%), Positives = 351/702 (50%), Gaps = 86/702 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + + L E + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVSSSEKQFGEKMAAFLTENRLTFETIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRKPK-RLIEDV 123 G KA GF+R GL T I C+IK G+ Y+ V + + + E+V Sbjct: 75 SKKIALDAEGDYSKAAQGFVRGKGLTTDDIEFCEIK-----GEEYVYVTKHEEGKATEEV 129 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ I P + + +P SM W++ ++F +IRP+ ++ +L ++ +D++ +I Sbjct: 130 LQGI-PQVLASLSFPVSMHWAS-----NSFEYIRPVHTLTVLL-----DDQALDMNFLDI 178 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 G ++ GHRF + S + Y +DL V+ D R+ I++ H L +++ Sbjct: 179 SSGRVSRGHRFLGEETT-IASANSYEQDLARVYVIADARERQEMIVHQIHELEIKFNVKV 237 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCF 303 D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L F Sbjct: 238 DIDEDLLNEVLNLVEFPTAFMGSFDSKYLEVPEEVLVTSMKNHQRYFVVRDQFGKLLPNF 297 Query: 304 ILVSNIQASDGG-AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL-DL 361 I V N +D +++GN +V+ ARLED FW+ DQ K + DL Sbjct: 298 ISVRN--GNDQHIENVIKGNEKVLVARLEDGEFFWREDQ--------------KLQIEDL 341 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLS 418 LDQ V FH KIG+ + + R V+ +AQ +D D ++ RA + Sbjct: 342 VNKLDQ---------VTFHEKIGSLRDHMKRTGVIADSLAQELDLSSQDSQVLARASQIY 392 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF ELQG +G++YA+L EN AI EH P +P +K ++ Sbjct: 393 KFDLLTGMVGEFDELQGLMGEKYALLAGENPEVAQAIREHYLPNSAEGELPESKAGAVLA 452 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ +IPL Q I Sbjct: 453 LADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFHWNIPLDQLIANCYNLPFD 512 Query: 530 ----EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 ++Q+ ++ F + I D+ EA+L + + +++ ++K Sbjct: 513 SLSYDNQSQVMDFISARIEKMMGAAIPKDIKEAVLAS---TIFQVPQMLETAQALVEASK 569 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMD 643 G + + + + + + EK ++ ++ S L E EK LY ++ H S Sbjct: 570 GSTYKSAVENLSRAFNLAEKAEEQVVVDSS----LFENDQEKALYQAVNSLDLHGNAS-- 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ +Q L ++ + I FFD +V D+ +++ NRL+LL Sbjct: 624 -EKINQ----LFALNDYIVNFFDSTMVMSDNAQLKANRLALL 660 >gi|1303829|dbj|BAA12485.1| YqfK [Bacillus subtilis] Length = 679 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 208/716 (29%), Positives = 354/716 (49%), Gaps = 59/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++K ++ Sbjct: 5 DLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKDVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF + G + D IK+ KG Y+ V + Sbjct: 65 QDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQG-ANVEDLYIKE--VKGIEYVFVQKF 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 L + I + +PK+MRW +IRP+K I+ + + + Sbjct: 122 QAGQETKSLLPELSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALF-----GQDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + G T GHRF H + ++S Y L+ V+ DP R+ I + + Sbjct: 172 IPFSITNVESGRTTQGHRFLG-HEVSIESPSAYEEQLKGQHVIADPSVRKQMIQSQLETM 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F + + Sbjct: 231 AAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFPVKDK 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V N S + +GN +V+ ARL DA F+K DQ Sbjct: 291 NGDLLPHFITVRNGN-SHAIENVARGNEKVLRARLSDASFFYKEDQ-------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 K N+D + + +L+ ++VFH ++G+ ++V R+ + +K+A + AD + V Sbjct: 336 KLNIDAN------VKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDTLKHVK 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR P+ Sbjct: 388 RAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGETPSTF 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--- 529 V++ADKLDT+ +F++I P+GS+DPY L R GI+ I+L+ I + + Sbjct: 448 TGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLPRQASGIVAILLDRNWGISFEELLTFV 507 Query: 530 ---EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + + Sbjct: 508 QTDKENELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKLGAP-- 565 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 F +A+ + ++++I +K R +I P E E +L+ ++QE+ K Sbjct: 566 -GFKETAEALGRVISISKKGVRG---DIQPDLFENEYEAKLFDAYQTAKENLQENFSKKD 621 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ ++ Sbjct: 622 YEAALASLAALKEPIDAYFDHTMVIADNESLKANRLAQMVSLADEIKSFANMNALI 677 >gi|168235257|ref|ZP_02660315.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736702|ref|YP_002116587.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238689772|sp|B4TZ49|SYGB_SALSV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|194712204|gb|ACF91425.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291494|gb|EDY30846.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 689 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 339/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|296386480|ref|ZP_06875979.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PAb1] Length = 684 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 216/719 (30%), Positives = 342/719 (47%), Gaps = 66/719 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAED-LSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + E LS I GL K G+ Y R Y P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALNSLGEAFLSGIEKGL-KAAGLGYAAARFYAAPRRLAVLVEQLAV 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ GP + G +A GF + G+ QI K K + Sbjct: 64 QQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVDL---QQIDKSGPKLRFSQTIAG 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P +L IV ++ ++P PK MRW+ ++RP + L +L +D Sbjct: 121 QPA---AGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQ-WLVMLFGDD---- 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 168 VVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKRVAE 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 228 LAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLD 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+N++ S IV GN +VV RL DA F+K+D+ Sbjct: 288 ANGKLLPRFITVANVE-SKAPENIVSGNEKVVRPRLTDAEFFFKQDKK------------ 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL+ RL +VVF A++GT E+ R+ L IA+ I + RA Sbjct: 335 --------QPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNAARA 384 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 385 GILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPSTLTG 444 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 445 AAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNAAVE 504 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F DRL+ D + + +++ + + L ++ + Sbjct: 505 QYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQA 564 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K E+ + L+ AEK L + +++ + + Sbjct: 565 FRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAESEVA 621 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V ++ Sbjct: 622 PLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADI 680 >gi|108762825|ref|YP_631304.1| glycyl-tRNA synthetase subunit beta [Myxococcus xanthus DK 1622] gi|122389055|sp|Q1D7R9|SYGB_MYXXD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|108466705|gb|ABF91890.1| glycyl-tRNA synthetase, beta subunit [Myxococcus xanthus DK 1622] Length = 703 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 210/731 (28%), Positives = 362/731 (49%), Gaps = 71/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLE+ +EEIPA A +DL ++ + + + + +R + TP RL +++K ++ Sbjct: 4 DLLLEVGAEEIPASFIGPALDDLKRVITERMADARLKHGEVRTFGTPRRLAVWVKDVADA 63 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + I+E LGP A GK KA + F S L+ D + KG+ A + + Sbjct: 64 GEDIIKEVLGPSAKAAFDAQGKPTKAAEKFAES--LKLAVDQLGRATTAKGEYLSARVEE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R D+LK + A+ + + KSMRW + S+ RP++ ++ +L ++ + Sbjct: 122 KGRPAADILKDTLHAAVHGINFRKSMRWGDVDT-----SFARPVQWLVALLGSD-----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ G T GHRF +P I++++ Y LE+A V+ D RR ++ Sbjct: 172 LPVVFGDVTSGRTTRGHRFLSPDAIELKAPAEYEVALEKAHVVADITKRRAQLVEKVRAA 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS G +L+ED+ L++++ LVE +G+F++++L LP E++ +K++Q+ F Sbjct: 232 ASKAGAQLLEDESLVDQVTNLVELPSPVVGTFEERHLDLPPEVLVQEMKSHQRYFSLVDS 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSN D ++ +G RV+ ARL D F Sbjct: 292 AGKLQPKFIAVSNTPVRDEQLSL-RGYQRVLRARLADGRFF------------------- 331 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVDR 413 F+ D PL R+ +L VV+ ++G+ E+V R R L + Q + A ++R Sbjct: 332 -FDEDRKTPLIDRVEKLGR--VVWQGQLGSYLEKVERFRTLAVWLGQEAGRAGEAATIER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL T +V EFPELQG +G+EYA E + AI EH PRG + +PT Sbjct: 389 AATLAKADLVTGMVGEFPELQGIMGREYARAGGEPDAVALAIAEHYLPRGAEDALPTQDP 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +AD+LD+L +AI + P+G+ DP+ALRRA + IIR++L LS +++ Sbjct: 449 GALIGIADRLDSLCGIFAIGKAPTGAADPFALRRACIAIIRLVLGRGYRFSLSAAVDESL 508 Query: 532 --------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + ++ FF RLK ++ R D++EA+L D+L+ Sbjct: 509 RLLAPKIANAKRKAGEPAPREQVLEFFRGRLKALWGEQH-RTDVVEAVLSAGFDDLVAAQ 567 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAV 630 ++ L+ A + ++ KR+ I+ EK+ R++ E +PQ L+ E E+ L+ Sbjct: 568 KRLEALSHIVGRADFQPLAVAFKRVVNIV---EKQGRDVQGGETNPQKLVDEPERNLHTA 624 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + + + + + + ++ FFD+V+V +D+ +R+NR+ LL I Sbjct: 625 FTQARSTVSGLVRVDDFSGALREITGLKPAVDTFFDKVMVMAEDKALRENRIRLLVEIGA 684 Query: 691 IILIVINVQKI 701 + V + KI Sbjct: 685 LFNQVADFSKI 695 >gi|307262297|ref|ZP_07543946.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868060|gb|EFM99887.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 689 Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 214/722 (29%), Positives = 354/722 (49%), Gaps = 67/722 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLVTA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 172 LIEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIEEDLLDEVTSLVEFPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D + I++GN +VV RL DA F+K Sbjct: 292 DKDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFK--------------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD R Sbjct: 336 -----TDLKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 449 ACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSA 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 509 ALFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA--VISDFGT 636 F + E + KR+ ILA K EIS EI + LL+EAE++ A VIS Sbjct: 569 HFRTLDSAEALAAANKRVSNILA---KVEGEISTEID-RTLLVEAEEKALAEQVIS-LQM 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V Sbjct: 624 ELAPTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|88705386|ref|ZP_01103097.1| Glycyl-tRNA synthetase beta chain [Congregibacter litoralis KT71] gi|88700476|gb|EAQ97584.1| Glycyl-tRNA synthetase beta chain [Congregibacter litoralis KT71] Length = 693 Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 204/721 (28%), Positives = 345/721 (47%), Gaps = 59/721 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 LLE+ EE+P+ + L L+ L ++G+ + + P RL + ++ L + Sbjct: 5 LLLEVGCEELPSSSLEQLGIALREQLLRHLADKGLSHGASHWFAAPRRLGVLVEDLVEQA 64 Query: 64 PEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E LGP + K +A GF G T + +I PK + L + Sbjct: 65 DDETREALGPPLAQAKDEEGNWSRAAQGFAAKQGC-TADELEIIDTPKGQRLGLKQVVTG 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E L TI AI +P PK MRW + ++RP+ I+ + + +++ Sbjct: 124 AKTSE-CLDTIANSAIADLPMPKRMRWGASRR-----EFVRPVHWIVLMYGDKSGFGEVL 177 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN + GHRFHAP + S +Y L +A V+ D + R + I + A Sbjct: 178 G-----ITSGNTSKGHRFHAPQSVTFASAANYRETLRKARVIADFQERCDLIREQVEKAA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +A+G + + D+DLL E+ LVEW GSFD +L +P E + +++++QK F + Sbjct: 233 TALGGQALIDEDLLGEVASLVEWPVALAGSFDTAFLEVPAEALISSMQSHQKYFPVVDAD 292 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L F+ VSNI++ D G ++ GN RV+ RL DA F+++D+ + Sbjct: 293 NKLMPNFVTVSNIESQDPGQ-VIAGNERVIRPRLADAAFFFEQDRQST------------ 339 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L R+ RL VVF K+G+ E+ RI+ L K+A LI A+ +RA Sbjct: 340 --------LASRVPRLGA--VVFQKKLGSLLEKTQRIQRLAGKLAALIGANQTDTERAAE 389 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L KADL +++V EF +LQG G YA EN + DAI +H P ++P +++ Sbjct: 390 LCKADLVSDMVLEFGDLQGIAGAYYARNDGENDAVADAIAQHYWPTQAGSDLPVGDVAVA 449 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LAD+LDTL+ + I + P+GSKDP+ALRRA++ ++RII+E + + L + +E Sbjct: 450 VALADRLDTLMGIFGIGQPPTGSKDPFALRRASIAVLRIIIEKGLALDLRECLELAGEGF 509 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + DRL + I ++ A+ + ++ ++ F Sbjct: 510 PAEVIAENAGDAVFDYMLDRLPALYENDAIAIEVFRAVRGSGSSKPADFDRRVRAVHAFG 569 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + E + KR+ ILA E +R+ +S L E LY I+ + Sbjct: 570 ERPEAEALAAANKRVSNILAKAE--DRDDDARVSADLLSEANEIALYEAITAAERDNVNA 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + Y L ++ P++ FFD+V+VN +D ++ NRL+LL ++ + + ++ ++ Sbjct: 628 LAKADYSTALGRLATLRAPVDAFFDEVMVNAEDPALKANRLALLASLRGQFMAIADISQL 687 Query: 702 V 702 Sbjct: 688 A 688 >gi|301060996|ref|ZP_07201795.1| glycine--tRNA ligase, beta subunit [delta proteobacterium NaphS2] gi|300444915|gb|EFK08881.1| glycine--tRNA ligase, beta subunit [delta proteobacterium NaphS2] Length = 624 Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 194/646 (30%), Positives = 322/646 (49%), Gaps = 61/646 (9%) Query: 76 GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PKRLIEDVLKTIVPVAIQK 134 GA KA GF + G+ ++ + Q + PK G+ YL V ++ P R ++L +P I + Sbjct: 18 GAPTKAAAGFAKKQGV-SVDELQTIETPK-GE-YLYVKQEIPGRPTLEILSERLPGIIGE 74 Query: 135 VPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRF 194 +PWPKSMRW +F ++RP+ IL + +++ + + GN T+GHRF Sbjct: 75 IPWPKSMRWGAV-----SFPFVRPVHWILSLF-----DGRVVPFEAAGVQSGNSTFGHRF 124 Query: 195 HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEII 254 AP + V +++ Y + LE A V+LDP R+ +L A A+ VG +D +L++ + Sbjct: 125 MAPEAVNVSTVEDYRKALENAFVVLDPHERQKVVLKVAQDAAANVGGVPADDPELVQTVA 184 Query: 255 GLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDG 314 L E+ GSF+ +L LP+ ++ ++ +QK F G L F+ ++N + D Sbjct: 185 NLTEYPTAVCGSFENAFLDLPDAVLITAMREHQKYFAVYDDVGSLMPNFVAINNTKTRDE 244 Query: 315 GAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDM 374 + + +G+ RV+ ARL DA F K D+ +PL +R+ D+ Sbjct: 245 -SVVCRGHERVLRARLSDADFFLKEDRK--------------------RPLLERLE--DL 281 Query: 375 LDVVFHAKIGTQGERVSRIRVLGKKI-AQLIDADVALVDRAIVLSKADLCTEIVREFPEL 433 V++ A++GT +V R+ L I AQ+I V A L+K DL T +V EFP L Sbjct: 282 KQVIYQAQLGTSYAKVMRVEALTAHISAQVIPEQVDGAKLAARLAKCDLVTHMVIEFPSL 341 Query: 434 QGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAIN 493 QG +GK YA L+ + C I +H P +P +I V +AD+LDT+ +A+ Sbjct: 342 QGAVGKAYAELEGYDEEICSGIYDHYLPLKAGGALPQTEIGAVVGMADRLDTIAGCFAVG 401 Query: 494 EKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------QNLILFFHD---RLKL 544 +P+G DP+ALRR L +IRII + D+ +E +++ F D R+ Sbjct: 402 LEPTGKADPFALRRHALAVIRIIEDRGWDLSFKSLVEKALSLLAEDITFDFDDTFGRVTA 461 Query: 545 YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEF-FSSAKGEKFLLSAKR 595 ++ +R D DL+EA + E D +L++ ++ L EF FSS + L+ KR Sbjct: 462 FIRERYKNMMLRSDYASDLVEAAICNEFDRILSLRPKMEQLKEFSFSSEEFTPLALTFKR 521 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 + I+ +K+ R S + P + +AEK L+ ++E + + ++ Sbjct: 522 VNNII---KKQGRMFS--VDPAHFKEDAEKDLWEAYQSLKGDVEECIGKSAFLDALGIMT 576 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + P++ FD V + DD R+NR+ LLQ I N +L + + K Sbjct: 577 RLRTPVDRLFDHVEILTDDETQRENRVGLLQLISNFVLTIADFSKF 622 >gi|167549108|ref|ZP_02342867.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325814|gb|EDZ13653.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 689 Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 339/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|320187712|gb|EFW62387.1| Glycyl-tRNA synthetase beta chain [Shigella flexneri CDC 796-83] Length = 689 Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + E + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADI 685 >gi|330965130|gb|EGH65390.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. actinidiae str. M302091] Length = 684 Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 208/718 (28%), Positives = 334/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVFLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G+ +I + K +L K Sbjct: 65 QPDRSVNLDGPPRQAAFDAGGNPTQAALGFAKKCGVDL---SEIDQSGPKLRYSQTILGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P K MRW ++RP + ++ + +++ Sbjct: 122 P---TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 VDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVEEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ASQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDA 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-TQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF A++G+ ++ R+ L IA I D RA Sbjct: 339 TFNDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 386 LLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKVKPAGLAEQVVEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVADI 680 >gi|145632310|ref|ZP_01788045.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae 3655] gi|144987217|gb|EDJ93747.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae 3655] Length = 688 Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 213/721 (29%), Positives = 348/721 (48%), Gaps = 66/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 KGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L ++ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYLPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGKLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDKLPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLLLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ ILA + EI+L + P AEK L + T Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP------AEKALAEAVLALRTE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V + Sbjct: 624 VQPLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVAD 683 Query: 698 V 698 + Sbjct: 684 I 684 >gi|168232493|ref|ZP_02657551.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468955|ref|ZP_03074939.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455319|gb|EDX44158.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333256|gb|EDZ20020.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 689 Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 339/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|66043282|ref|YP_233123.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae B728a] gi|75504069|sp|Q500T7|SYGB_PSEU2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|63253989|gb|AAY35085.1| Glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. syringae B728a] gi|330970335|gb|EGH70401.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aceris str. M302273PT] Length = 684 Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 209/718 (29%), Positives = 335/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G+ +I + K +L K Sbjct: 65 QPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDL---SEIDQSGPKLRYSQTILGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P K MRW ++RP + ++ + +++ Sbjct: 122 P---TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 VDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDV 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF A++G+ ++ R+ L IA I D RA Sbjct: 339 TFNDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 386 LLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVAQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I IQ Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAIQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|81428491|ref|YP_395491.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus sakei subsp. sakei 23K] gi|123728652|sp|Q38X99|SYGB_LACSS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|78610133|emb|CAI55182.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus sakei subsp. sakei 23K] Length = 693 Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 215/737 (29%), Positives = 353/737 (47%), Gaps = 88/737 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EE+PA + + + L + L+E+ + + ++ Y TP RL + ++ L+ Sbjct: 5 FLLEIGLEEMPAHVVMPSIQQLEKRVRDFLEEQHLEFGQLKTYATPRRLAILIEDLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL--AVLR 114 + EE GP G KA GF+R GL T D K+ VY+ +++ Sbjct: 65 ADIHEEAKGPAKKIALDAEGNWSKAAQGFVRGQGL-TTDDITFKELKGVEYVYVEKSIIG 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 KP I LK + I + +P M W+ F +IRP+ I+ +L ++ Sbjct: 124 KPVEAILPELKAV----IMAMTFPTRMHWADYD-----FEYIRPIHWIIALL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +ID + + G T GHRF ++ D Y LE V+ D R+N I + Sbjct: 170 VIDFSILNVTTGRTTQGHRFLGQEVTLAKATD-YEAALEAQFVIADEAKRQNLIQTQIEK 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ D +LLEE+ LVEW F G FD KYL +PEE++ ++K NQ+ F R+ Sbjct: 229 MAQENDWQVDLDANLLEEVTNLVEWPTAFYGQFDAKYLEIPEEVLITSMKDNQRYFYARS 288 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V N G A ++ GN +V+ ARLEDA F+ DQ ++ Sbjct: 289 QAGDLLPVFIGVRN-----GNDAFMENVIAGNEKVLTARLEDADFFYHEDQK-----VTI 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 E+ K +V FH KIG+ E+++R+ ++ + + Q L +A+ Sbjct: 339 AENVAKLQ-----------------NVSFHDKIGSLAEKMTRVGLIAQFLGQKFGLSEAE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EF ELQG +G++YA+LQ E + A+ EH P Sbjct: 382 LVDLQRASDIYKFDLVTGMVGEFAELQGVMGEKYALLQGETPAVATAVREHYMPISAEGA 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ +++ADK D++ +F+A+ PSGS DPYALRR GI+RI+ P++ Sbjct: 442 LPATKVGAVLAIADKFDSMADFFAVGMIPSGSNDPYALRRQAYGIVRILENQDWHFPMAD 501 Query: 528 FIEDQNLIL-------------------FFHDRLKLYLHDR--DIRHDLIEAILRPENDN 566 F + I+ F DR++ + +R D+++A+L+ + + Sbjct: 502 FQAAMSHIVKQQADFDLDWSANAAAISDFLTDRVRQRFNGMRPKVRRDIVDAVLKNQGQD 561 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS-LEISPQYLLLEAEK 625 + + + K L+ A F + + I ++L + EK + E + L + P +AEK Sbjct: 562 PVVMFEAAKVLSAHQDDA---DFKATIEAITRVLRLAEKVDFETTDLTVDPALFENDAEK 618 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LY + D + + Y L ++ IE +FD +V +D VR NRL+ L Sbjct: 619 ALYTAVEDLRGATATNTLAENYAA----LQTLRPLIEAYFDATMVMAEDEAVRRNRLTQL 674 Query: 686 QYIKNIILIVINVQKIV 702 I I L + ++ +++ Sbjct: 675 MIIAQIALSLGDLNELI 691 >gi|325143641|gb|EGC65960.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240013] Length = 686 Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 343/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 49 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 107 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 108 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 161 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 162 HGLIVLHGGD-----IVNVSVLGLQSGNQTLGHRFLSNGEITIENADSYAEQMRGQGKVV 216 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 217 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 276 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q +D + I+QGN RV+ ARL DA F+K Sbjct: 277 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADP-SHIIQGNERVLRARLSDAEFFYK 335 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 336 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 373 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 374 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 433 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 434 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 493 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 494 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 552 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 553 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 608 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 609 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 668 >gi|330961519|gb|EGH61779.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. maculicola str. ES4326] Length = 684 Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 215/718 (29%), Positives = 335/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L+ G+ Y + Y P RL + + LS Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLQGAGLTYSAKQVYAAPRRLAVLITELSTQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K +L KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKPT 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 124 L---SLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAYVLADFNERRQIISKRVEELAT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F +G Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPE+QG G YA E A+ E PRG +PT V Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 ++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFG 507 Query: 531 --------DQNLILFFHDRLKLYLHDR--DIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D D+ L L+P + L ++ + F Sbjct: 508 TKIKPAGLAEQVLDFIFDRLRARYEDEGVDVATYLSVRALQPA--SALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I IQ Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGNIAQTVEPKYFDNANEFSLYSAIQQADHAIQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|284051092|ref|ZP_06381302.1| glycyl-tRNA synthetase subunit beta [Arthrospira platensis str. Paraca] gi|291571664|dbj|BAI93936.1| glycyl-tRNA synthetase beta chain [Arthrospira platensis NIES-39] Length = 713 Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 208/710 (29%), Positives = 348/710 (49%), Gaps = 82/710 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A ++ LKE+ + ++++ Y TP RL + + GL Sbjct: 1 MPSFLLEVGTEELPATFVEGAIAQWEAMIPASLKEQYLTCESVKVYATPRRLAVVIAGLP 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP + G KA +GF + ++ + D +I+ PK GD + Sbjct: 61 EQQPDRQEEIKGPPATAAFKEGKPTKAAEGFAKKQNIK-LEDIEIRPTPK-GDFVFVLKH 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R +++ ++ I ++ + MRW + RP++ ++ +L E Sbjct: 119 IPGRKTAEIVTELIRQWINRLEGKRFMRWGD-----GDIRFPRPIRWLVTLLDKE----- 168 Query: 175 IIDLDLKEIPCGNIT-------YGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 I+ L IP G+ T GHR P+ + + Y L +A V +DP+ R+ A Sbjct: 169 ILPLS---IPNGSETISSDRHSQGHRVLHPNSVSIAEATEYAETLGKAFVEVDPQTRKTA 225 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I N A++VG E +DLL E++ LVEW +G+FD ++L LP E+I++ + T+Q Sbjct: 226 IANQVKVAANSVGGEAEIPEDLLNEVVNLVEWPTAVVGTFDGEFLVLPPEVIKMVMVTHQ 285 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F +G L FI +SN + A I GN RV+ ARL D F+K D Sbjct: 286 RYFPVLDTQGNLKPYFITISNGDPAKA-AIIASGNERVIRARLADGEFFYKTD------- 337 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--- 404 L KPL+ + D+ +V F +G+ ++V+RI +IA+ + Sbjct: 338 -------------LKKPLENYLP--DLENVTFQEDLGSVRDKVNRIIANADRIAKQLKVS 382 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + ++A + RA +L KADL +++V EFPEL+G +G++YA+ E+ AI EH P+G Sbjct: 383 EGELAQIKRAALLCKADLVSQMVYEFPELEGIMGEKYALAGGESEGVAKAIVEHYLPKGA 442 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +PTN IS V+LADKLDTL++ + + P+GS DP+ALRRA G++ II + + Sbjct: 443 SDRLPTNIISQVVALADKLDTLVSIFGLGMLPTGSSDPFALRRAANGVLNIIWSADLPLN 502 Query: 525 LSQFIED---------QNLIL--------FFHDRLKLYLHD-RDIRHDLIEAILRPEN-- 564 L + ++D N +L FF R++ L D + I +DL+ A+L E+ Sbjct: 503 LHELLKDLTTDFVNSHPNAMLGLIHHLEDFFLQRIRTLLQDEKSIDYDLVNAVLGDEDIE 562 Query: 565 ------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISP 616 +LL + D L E + + R ++ + E+ + I+P Sbjct: 563 YKERALQDLLDVRDRALFLQEIRGDGTLDIIYETINRSTRLAKQGDLDTGELQPDTVINP 622 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 +E+ L + + + Q +++ + Y Q+ L +I + FFD Sbjct: 623 SLFEKSSEQALMEALENLIPNTQAALETRNYRQLVTALAAIVPTVTQFFD 672 >gi|322613960|gb|EFY10896.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620329|gb|EFY17197.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625334|gb|EFY22161.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629999|gb|EFY26772.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634189|gb|EFY30924.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635910|gb|EFY32619.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643062|gb|EFY39637.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644607|gb|EFY41143.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650849|gb|EFY47241.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652987|gb|EFY49322.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659950|gb|EFY56190.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663283|gb|EFY59487.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668769|gb|EFY64922.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674428|gb|EFY70521.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678364|gb|EFY74425.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680870|gb|EFY76904.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687194|gb|EFY83167.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192153|gb|EFZ77386.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200657|gb|EFZ85731.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201367|gb|EFZ86433.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206767|gb|EFZ91721.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211803|gb|EFZ96635.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216162|gb|EGA00890.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220385|gb|EGA04839.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226242|gb|EGA10457.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228362|gb|EGA12493.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234183|gb|EGA18271.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237168|gb|EGA21235.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244687|gb|EGA28691.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249168|gb|EGA33086.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250713|gb|EGA34593.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257588|gb|EGA41275.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262297|gb|EGA45858.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266148|gb|EGA49639.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268783|gb|EGA52241.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 689 Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 213/722 (29%), Positives = 338/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I I GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRIIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|288574811|ref|ZP_06393168.1| glycyl-tRNA synthetase, beta subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570552|gb|EFC92109.1| glycyl-tRNA synthetase, beta subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 688 Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 212/720 (29%), Positives = 357/720 (49%), Gaps = 59/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + +LEI +EEIP+R +A +L+ I E + N+ Y TP RL L +K L+ Sbjct: 5 NLILEIGTEEIPSRFMPRALRELADIASAEFSEARISCGNIETYGTPRRLVLSIKKLNSR 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G +A GF +S ++ + D + K+D AV+ + Sbjct: 65 QDDLSEEFKGPAWKSAFDGNGTPTRAAIGFAKSKNIE-VEDLE-KRDVNGIPYVFAVVNQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 D+L ++ + ++ +PK+M W T + + RP++ ILC+L +K+ Sbjct: 123 KGGQTLDLLPDMLCRIVNRLVFPKNMYWKKT-----SVRFARPIRWILCLL-----DDKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +L I G I+ GHRF + V Y+ L + V++D + R+ +L+ L Sbjct: 173 VSFELNGIKSGQISRGHRFMGAPSVSVSKESSYMEKLYDNYVIVDQKKRKEKMLSAIAIL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + + +D DL+EE + LVE+ F G FDKKYL LPEE++ T+K +QK F R Sbjct: 233 EKEMDGTIDKDPDLIEENLFLVEYPVPFYGKFDKKYLELPEEVLVTTMKHHQKYFPVRDH 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ VSN +A + IV+GN RV+ ARLEDA FW Sbjct: 293 SGKLMPYFVGVSNNRAVNMNV-IVEGNQRVLRARLEDASFFW------------------ 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDR 413 N D +PL ++ RL VV+ K+G+ ++V L + + ++ + + L++R Sbjct: 334 --NEDSREPLASKLDRLKT--VVYQEKLGSVYDKVMITVDLVRSLTSMLGLEEHIKLIER 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK+DL T +V EFPELQG +G+EYA+ E+ AI E P+ + P++ I Sbjct: 390 AAILSKSDLVTNMVYEFPELQGIMGREYALKDGEDPRVAMAIYEQYLPKSAGDETPSDVI 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + L++++ ++ + + +PSGS+DPY LRRA + II +D+ L +F+++ Sbjct: 450 GAVLGLSERVFNMVGAFKMGFRPSGSQDPYGLRRAVRCVNEIIWSLSLDVNLDEFLKEAA 509 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + LI F RL + L ++D HDL E + L + ++ L Sbjct: 510 HSLQLEKEPMEELISFIRQRLLIQLKEKDFSHDLAELAVSVTGGRPLQALRFLESLKAVQ 569 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + +A R+ ILA + + R S+E++ LL+ AEK L + + ++ Sbjct: 570 EEQWFINLVTAAVRVQNILA-KNGEERGSSVEVAK--LLMPAEKDLAEAVESCSRTVCKA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + + + L + I FFD V+V +D VR NRL+LL +++ + N+ ++ Sbjct: 627 VEEDNWDLLMESLSRLSPSITSFFDDVMVMDEDSTVRANRLALLGECEDLFREIGNLSRL 686 >gi|329297820|ref|ZP_08255156.1| glycyl-tRNA synthetase subunit beta [Plautia stali symbiont] Length = 689 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAEAFAAHFTAELDSAGLAHGDVSWFAAPRRLALKVAQLAAAQ 65 Query: 64 PEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP V A GK KA +G+ R G+ ++ D + V+ ++ Sbjct: 66 PDREVEKRGPAVAAAFDAEGKPTKAAEGWARGNGITVEQAERLSTDKGEWLVHRTAVKGE 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW S ++RP+ ++ +L +++I Sbjct: 126 S--AQALLPAMVATALSKLPIPKLMRWGA-----SDVQFVRPVHTVTLLL-----SDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + + D Y + L+E V+ D R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFIGEPELTLDNADQYPQLLQERGKVIADYVTRKAKIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQQLGGKADLSDRLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAE 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGQLLPNFIFVTNIESRDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQKELGTLRDKTDRIQALAGWIAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSSPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D I+A+L +K ++ F Sbjct: 511 YGSKLSNANVVDDVIDFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L AE +L ++ G +Q Sbjct: 571 RTLEAASALAAANKRVSNILA---KATETLNDSVQASLLKENAEIQLATFVTALGDKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + E ++ FFD V+VN DD VR NRL+LL ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAQLREAVDNFFDNVMVNADDEAVRINRLTLLAQLRELFLQVADI 685 >gi|330898600|gb|EGH30019.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. japonica str. M301072PT] Length = 684 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 211/718 (29%), Positives = 334/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLISALATQ 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP A +A GF + G+ +I + K +L K Sbjct: 65 QPDRSVNLDGPPRQAAFDADSNPTQAALGFAKKCGVDL---SEIDQSGPKLRYSQTILGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P K MRW ++RP + ++ + +++ Sbjct: 122 P---TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 VDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 AAQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDG 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 AGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF A++G+ ++ R+ L IA I D RA Sbjct: 339 TFNDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 386 LLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQ 527 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L +Q Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKFAVTQ 505 Query: 528 FIED-------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKIKPAGLAEQVLEFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I IQ Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAIQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|56415548|ref|YP_152623.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364476|ref|YP_002144113.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821567|sp|Q5PLN2|SYGB_SALPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690750|sp|B5BHU1|SYGB_SALPK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56129805|gb|AAV79311.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095953|emb|CAR61536.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 689 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 339/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVVTSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + S + Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDSAEQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|111073620|emb|CAL29483.1| Glycyl-tRNA synthetase, beta chain [Wolbachia endosymbiont of Onchocerca volvulus] Length = 701 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 221/728 (30%), Positives = 354/728 (48%), Gaps = 77/728 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 + L E SEEIP+RMQ A + + + V + ++ + T R+ L++ ++ Sbjct: 2 LSQLLFECLSEEIPSRMQSLAVAQVKSYITNAFNKNNVKFASIEVFVTARRIALFVSDIN 61 Query: 61 PHSPEKIEERL-GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 + ++ GP V A + AI+GFL+ + D I+K G+ Y Sbjct: 62 ISELKGSNNKISGPNVSAPESAIEGFLKKYQ-KDRKDLLIRK-VNDGEFYFIKRESSSFN 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 I++ LK + ++ WPKSMRWS W+RP+K+ILCIL ++II + Sbjct: 120 IKEFLKNQLEKMLKDFSWPKSMRWSKGKE-----RWVRPIKNILCIL-----NDEIIPVF 169 Query: 180 LKEIPCGNITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 I N TYGHRF + V+ Y L++ V+L + R+ IL+ ++ Sbjct: 170 FAGITACNTTYGHRFLSGGAMLTVKVPKDYFELLKKNNVILQQDKRKQFILDQINKFIKE 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFD-KKYLCLPEELIRLTIKTNQKCFVTRTREG 297 L+L E+ LL+E+ GL+EW V G + +K LP+E I I T QKC G Sbjct: 230 QNLQLEENNYLLDELTGLIEWPVVLFGKVNHEKSFGLPKEAILSIINTQQKCLALSN--G 287 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 + F V N+ + + +++G+ R++ ARL DA +D+ KE+ Sbjct: 288 KRISHFATVVNVSSDE----VIKGHERILEARLADAQFLMSQDR---------KEN---- 330 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIV 416 LD + +LD ++ HA +G GE+V RI VL K IA + A + V+ A Sbjct: 331 -------LDYYVRKLD--SILSHAYLGNVGEKVRRIMVLSKYIAMYVPHASLTKVEHAAY 381 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL T +VREFPELQG +G YA E+ +AI EH KP P + P + +I Sbjct: 382 LAKADLATSMVREFPELQGIMGGYYASYFQEDKEIVEAITEHYKPVRPEQECPRSPTAIV 441 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---- 532 V++ADK+D+L+ A EK SGS D + LRR +GIIR ILEN + IP+ I+ Sbjct: 442 VAIADKVDSLVGLIAAGEKISGSYDQFGLRRTAIGIIRTILENNLHIPIRLLIDKSVSLY 501 Query: 533 ------------------------NLIL-FFHDRLKLYLHDRDIRHDLIEAIL-RPENDN 566 L+L F R ++ L ++ +R D+I++IL + + D+ Sbjct: 502 LEFVFAGDAASVGQPNKLNREQILELVLKFCLKRFRVILKNKGVRQDVIDSILYKTDIDD 561 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL--EISPQYLLLEAE 624 LLT L+ + S+ KGE+ L + +R+ I++ + KKN + + ++L+ E Sbjct: 562 LLTAEKQTIILDCYLSTPKGEQILNTYRRVSNIVS-KAKKNDNTTYIASYNQEFLIDNKE 620 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L + I++++ + + D L+ I F D V +N ++R+NR SL Sbjct: 621 IALSNCVVAVYERIKQAIKNDHFSAALDELNRFLPLINQFMDNVKINCAYDKLRENRFSL 680 Query: 685 LQYIKNII 692 L + +I Sbjct: 681 LASVISIF 688 >gi|53803631|ref|YP_114481.1| glycyl-tRNA synthetase subunit beta [Methylococcus capsulatus str. Bath] gi|53757392|gb|AAU91683.1| glycyl-tRNA synthetase, beta subunit [Methylococcus capsulatus str. Bath] Length = 693 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 225/723 (31%), Positives = 358/723 (49%), Gaps = 63/723 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L E+ +EE+P + K +E L + L++ G+ Y + Y TP RL L ++ L+ Sbjct: 6 DLLFELGTEELPPKSLLKLSEALKDHVAAGLEKAGLSYAGIEAYATPRRLALLVRRLAAA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP + GA KA +GF RS G+ T D I +KG+ V Sbjct: 66 QPDQTIERRGPALNAAYDAQGAPTKATEGFARSCGVTT--DQLITLKTEKGEWVGVVQEI 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R E ++ I+ A+ +P K MRW + + ++RP++ ++ + + Sbjct: 124 RGRSTEALIPDIIRQALTALPIAKRMRWGSGLA-----EFVRPVQWVVLLYGG-----TV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ++ ++ + G T GHR HAP PI++ + Y L VL D RR I A Sbjct: 174 VECEILGVASGRTTRGHRCHAPDPIEITNPTEYAGLLTTRGHVLPDFGERRACIERLAVE 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ V + + D DLL+EI LVEW +G F+ +YL LP E++ T++ NQK F Sbjct: 234 TAATVNGKPLIDPDLLDEITALVEWPVPVLGGFEARYLSLPPEVLITTMQDNQKYFPVVD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI SNI S + +GN RVV RL DA FW +D+ Sbjct: 294 AEGGLLPHFITFSNID-SRRPEFVREGNERVVRPRLADAEFFWNQDRK------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L++R+ L V F K+G+ ++ R++ L IA+ ++ D + V+RA Sbjct: 341 --------RTLEERVEELGQ--VTFQNKLGSVLDKTRRVQQLAVFIAESLNVDPSFVERA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+KADL T +V EF ELQG +G+ YA+ + E AIEE P+ +P ++ Sbjct: 391 ALLAKADLLTHMVGEFTELQGLMGRYYALAEGEPYEVALAIEEQYLPKVSGGALPASRTG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 ++LA+K+DTL +++ PSG +DPYALRRA LGIIRI++E ++D+ + +E Sbjct: 451 EILALAEKIDTLAGIFSVGLVPSGDRDPYALRRAALGIIRILIEKRLDLDVEVLLEKALN 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L+ F ++RL+ Y ++ RHD EA+L NL +D + + E Sbjct: 511 LLPHGFDPEATRSALLDFIYERLRGYCLEQGYRHDEFEAVLAIRPTNLADFLDRLAAVRE 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDFGTHI 638 F E + KRI IL +K+ E + + + +L+E +EK L A I Sbjct: 571 FRGLTAAESLAAANKRIRNIL----RKSGETVVANAEERILIEPSEKALLAAARQAHADI 626 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y L + + ++ FFD V+V +D +R NRL LL ++ + L V ++ Sbjct: 627 LPLLHARDYTTALCRLAQLRDCVDAFFDTVMVMCEDVSLRSNRLGLLALVEGLFLNVADI 686 Query: 699 QKI 701 + Sbjct: 687 STL 689 >gi|204928626|ref|ZP_03219825.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322059|gb|EDZ07257.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 689 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 338/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGQPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|116618293|ref|YP_818664.1| glycyl-tRNA synthetase, beta subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271507|sp|Q03WY1|SYGB_LEUMM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116097140|gb|ABJ62291.1| glycyl-tRNA synthetase beta chain [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 685 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 215/733 (29%), Positives = 357/733 (48%), Gaps = 81/733 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + + Y TP RL + L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTSSENQLIERTRNFLAEHRLTVGAINPYSTPRRLAVELTDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G T D + + D Y+ + Sbjct: 61 EKSESLSEEKRGPSIERAKDANGEWTKAAMGFARGQG-ATPDDFETR------DGYVWLT 113 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + +D+L I + ++ + M+W+ +AF ++RP++ ++ + Sbjct: 114 KHTEGVPAKDILVKIGAEVVSEMKFSTYMKWAN-----NAFLYVRPIRWLVALF-----D 163 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D + ++ G +T GHRF + +++ S D Y+ LE A V+++ E R+NAI + Sbjct: 164 KEVVDFHVLDVQTGRVTRGHRFLSNEHVEISSADDYVSKLESASVVVNAEVRKNAIRSQL 223 Query: 233 HRLASAVGLELVEDKD----LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +A L D D LLEE+ +VEW F G+FDKKYL +P+E++ +++ +Q+ Sbjct: 224 TAIAKQNNWSLELDTDAAQNLLEEVNNIVEWPTAFAGTFDKKYLEIPDEVLITSMREHQR 283 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L F+ V N + ++ GN +V+ ARLEDA F+K DQ Sbjct: 284 FFFVTNHDGKLLPHFLSVRNGN-KEHLDNVIAGNEKVLVARLEDAEFFYKEDQ------- 335 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD- 407 +K + M ++ L VFH KIGT E + R VL + +AQ ++ D Sbjct: 336 -------------TKTIADYMEKVKKL--VFHEKIGTVYEHMQRTGVLAQALAQSLNFDE 380 Query: 408 --VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 ++ V RA + K DL T +V EF ELQG +G+ YA L EN + AI+EH P Sbjct: 381 QQLSNVSRAAEIYKFDLMTGMVGEFDELQGIMGEHYAKLFGENPAVAAAIKEHYMPTSAT 440 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP- 524 + + I +++ADKLD ++ F+A + PSGS DPY LRRA GI+R + E I Sbjct: 441 GKIAESDIGAVLAVADKLDAIVTFFAADLTPSGSNDPYGLRRAATGIVRTLQEKNWHIAL 500 Query: 525 ---LSQFIEDQN---------LILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIV 571 L+QF + Q ++ F DR++ D +R DL+ A + R N +++ ++ Sbjct: 501 KPVLTQFAQSQGEVAAADITAVLEFILDRVRKLTLDDGVRQDLVSAGVSRSGNTDVVYLI 560 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D I L + S R+ + LA+++ N + P +AEK LY Sbjct: 561 DRINVLAAHSKDNDFRDVIESLTRVDR-LAVKQLTND----SVDPSLFENDAEKELYQAT 615 Query: 632 SDFG-TH-IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +H ++E D ++ L + PI +F+ +VN ++ V++NR + L I Sbjct: 616 YALNLSHLVKEGAD-----EVYTTLAGLQSPISTYFEATMVNTENAAVKNNRYAQLNVIH 670 Query: 690 NIILIVINVQKIV 702 +I + ++++IV Sbjct: 671 RLISELGDLEQIV 683 >gi|197251342|ref|YP_002148583.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238689993|sp|B5EX65|SYGB_SALA4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197215045|gb|ACH52442.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 689 Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 339/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PAIILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|22299735|ref|NP_682982.1| glycyl-tRNA synthetase subunit beta [Thermosynechococcus elongatus BP-1] gi|22295919|dbj|BAC09744.1| glycyl-tRNA synthetase beta chain [Thermosynechococcus elongatus BP-1] Length = 727 Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 227/752 (30%), Positives = 356/752 (47%), Gaps = 95/752 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +E++PAR A ++ LKE G+ + + + TP RL + ++GL P Sbjct: 9 FLLEVGTEDLPARFVSSALRQWRTLIPQTLKERGLTGE-VNVWATPRRLAVLIEGLPPQQ 67 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P+++ E GP R G A+ GFLRS ++ D +I+ K VYL +R P Sbjct: 68 PDQVVEIKGPAATVAFREGEPTPALLGFLRSRQ-GSLEDIEIRPTAKGEVVYLKQVR-PG 125 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L + I + P+ MRW S RP++ ++ + E+++ Sbjct: 126 QPTPQLLSELAQQWIAALEGPRFMRWGDGDLRFS-----RPIRWLVLLW-----DERVLP 175 Query: 178 LDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 L L+ I TYGHR + I + Y LE+A VL+DPE R+ I Sbjct: 176 LVLESHSVAIASDRTTYGHRVLSQGAIVLSHAQDYATALEKAGVLVDPEVRQQRIREQIA 235 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF--- 290 LA+ G + LLEE+ LVEW +GSF+ ++L LP E+I + ++Q+ F Sbjct: 236 ALAAEAGGWTDLEVPLLEEVTHLVEWPTAVLGSFEARFLALPLEVITTVLVSHQRYFPVY 295 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 TR+ +L FI +SN A I GN RV+ ARL DA F+K D Sbjct: 296 TDATRQALLP-VFITISN-GAPAATPLIRGGNERVIRARLADAEFFYKADT--------- 344 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---AD 407 ++PL+ +L V F ++G+ ++V R+ L ++IA ++ A+ Sbjct: 345 -----------AQPLEHYCGKLAT--VTFQDELGSMADKVERLTALARQIATALNCTAAE 391 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 VA ++R L KADL T++V EFPELQG +G+ YA + E + I EH PR + Sbjct: 392 VAAIERTASLCKADLVTQMVGEFPELQGYMGQVYATVSGEAPAVATGIFEHYLPRFAGDR 451 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P + V LAD+LDTL++ + + P+GS DP+ALRRA G+I I+ + + + L Sbjct: 452 QPQSLTGQVVGLADRLDTLVSLFGLGLCPTGSSDPFALRRAANGVITILWQGEHHLNLLA 511 Query: 528 FIE-------------------DQNLILFFHDRLKLYLH-DRDIRHDLIEAILRPENDNL 567 ++ +Q L FF RL+ L D I +DL+ A++ PE+ Sbjct: 512 LLQEYAQAFCRQFAAKLSAADLEQQLRQFFSQRLRTLLQEDLGIEYDLVNAVI-PEDQPE 570 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL--------------E 613 L I+ L + + +FL ++ +++AI NR L Sbjct: 571 LQ----IRALRDVVDARDRAQFLQKLRQSGELMAIYPTVNRAARLARQGTLGTDCLNIRA 626 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLV 670 + ++L EK YA + D +Q++ + Y I D L S+ + FFD VLV Sbjct: 627 VKAKHLETPIEKEFYAALKDILPTVQQAQGQRAYGAIVDALVSLAPIVSRFFDGEESVLV 686 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +D VR NRL+LL ++N I+ + IV Sbjct: 687 MAEDATVRANRLALLGLLRNCAAIIGDFGAIV 718 >gi|323143408|ref|ZP_08078093.1| glycine--tRNA ligase, beta subunit [Succinatimonas hippei YIT 12066] gi|322416813|gb|EFY07462.1| glycine--tRNA ligase, beta subunit [Succinatimonas hippei YIT 12066] Length = 688 Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 217/702 (30%), Positives = 333/702 (47%), Gaps = 62/702 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 P + K A+ L + L + G+ + + + Y TP RL L +K L ++ E GP Sbjct: 16 PPKALRKLAQALHDDFVKHLNQAGLKFSSAQWYATPRRLALIIKDLETKQADREIEIKGP 75 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 V A KA G+ + G+ ++K D KG+ K ++ Sbjct: 76 AVKAAFDANGNPTKAAIGWATANGITVDQADRLKTD--KGEWLYIKSVKHGSDTATLIPQ 133 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + A+ +P PK M W ++RP+ + LC+L K+I+ ++ + Sbjct: 134 MFKEALSALPIPKLMHWGDKKE-----EFVRPVHT-LCMLFGN----KLIEGNILGVSSS 183 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 GHRF + V S D Y+ L +E V+ + + R+ +I + +LAS++ Sbjct: 184 KTIKGHRFMGQQTLTVDSADSYLSQLKDEGAVIANYDERKASIRSQVEKLASSINGVADL 243 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D LLEE+ LVE VF+ SF+ ++L +P E + T+K +QK F +G L F Sbjct: 244 DDALLEEVTSLVENPHVFLASFEDRFLKVPSEALVYTMKGDQKYFPIYDGQGKLLPKFAF 303 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 VSNI SD A++ GN RVV RL DA F FN D + L Sbjct: 304 VSNINPSDT-TALISGNERVVRPRLSDAEFF--------------------FNTDRKQSL 342 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 + RL+ +V+ IGT R + L IA LI+AD L +RA L+K DL T Sbjct: 343 ESFFPRLET--IVYQKDIGTIAYRSEIVGKLAAYIASLINADPQLCERAAHLAKCDLATT 400 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF + QG +G YA L E+ + +AI E PR + +PT + I VSLA+KL T Sbjct: 401 LVTEFTDTQGIMGMHYAELDGEDQNVAEAIFEQYLPRFAGDKIPTKPVQIAVSLAEKLTT 460 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------------- 531 LI + IN P G KDPY LRRA +G+IRI++ENK+D L I Sbjct: 461 LIGIFGINLLPKGDKDPYGLRRAAIGLIRIVIENKLDFDLVDVINQGCELLKDKFKADNT 520 Query: 532 -QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +N+ + RLK Y D++I ++ A+L NLL IK + +F + Sbjct: 521 GKNVADYIFGRLKAYYQDQNIGGEIFAAVLSTHPTNLLDFDKRIKAVVKFKELPEATDLA 580 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KR+ IL+ EK + EI + L +AE +L ++ I E +H Y + Sbjct: 581 SAYKRVANILSKNEKHDGEIMTNL----LKEDAEIKLVDHLNHLLPVIDELYNHGDYERA 636 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 L + E ++ FF+ V+VNV+D +V+ NR+++LQ + + Sbjct: 637 LTTLAELKEDVDGFFEHVMVNVEDPQVKANRIAILQKLNAVF 678 >gi|295695443|ref|YP_003588681.1| glycyl-tRNA synthetase, beta subunit [Bacillus tusciae DSM 2912] gi|295411045|gb|ADG05537.1| glycyl-tRNA synthetase, beta subunit [Bacillus tusciae DSM 2912] Length = 695 Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 209/732 (28%), Positives = 365/732 (49%), Gaps = 76/732 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EE+PAR +A + L + + L+ +G+ + ++ Y TP RL LY L+ Sbjct: 5 FLLEIGVEELPARFVPEALDQLRVKMSEWLEAQGLAHGALQVYGTPRRLTLYAADLAERQ 64 Query: 64 PEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ + GP + A K KA +GF RS G+ + D + P+ VY+ L++ Sbjct: 65 EDREFQVRGPSLKAAKGPDGRWTKAAEGFARSQGV-AVDDLVERGTPQG--VYVYALKRE 121 Query: 117 KRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 L ++L +P + + +PK+MRW T + RP++ ++ + E+I Sbjct: 122 AGLRTPELLAGYIPELVLGLSFPKTMRWGTGD-----VRFARPIRWLVALY-----GEEI 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ + G + GHR P +++ + Y+ L+ A V++D R+ I++ R Sbjct: 172 VPAEVAGVKTGRTSRGHRTLHPGQVEIPRAEAYVDVLDAAFVMVDVARRKEVIVDQVRRA 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G + V D++LLEE++ LVEW F G+FD+ +L +P E+I LT+K NQ+ F Sbjct: 232 AAEIGGQAVIDEELLEEVVHLVEWPTAFAGAFDRDFLQVPPEVIMLTMKENQRYFPVVDG 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L F+ V N D +V+ GN +V+ ARL DA F+ D+ P + Sbjct: 292 DGGLIPGFVGVRN--GGDHRLDVVRAGNEKVLRARLADAKFFYDEDRKIAPIRA------ 343 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 M RL +VF GT ++V R+R +G ++A L +V + Sbjct: 344 --------------MERLR--HIVFQEGAGTMYDKVERVRRVGLELADRLGLAPREVETM 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 + A + K DL T +V EFPEL+G +G+ YA+ E +AI EH +PR P + +P + Sbjct: 388 EAAGRILKFDLATHMVYEFPELEGVMGRYYALEAGEGPEAAEAILEHHRPRFPGDELPGS 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +++ADK DTL + +P+GS+DPY LRR LG+++I+ +I I L + + Sbjct: 448 PAGTVLAVADKADTLCASFYAGIRPTGSEDPYGLRRNALGLLQILRYLEIPITLGEIFDL 507 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +L F RL+ +L + RHDL++AIL ++ L ++ + Sbjct: 508 AEAALRASGFQDGGTWRADLDSFVTTRLRTWLLEEGRRHDLVDAILHRADEPLAVLIGRV 567 Query: 575 KHLNEFFSSAKGEKFLL----SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + + +G L +AKR+ + KK ++ E P +AE+ L+ Sbjct: 568 RFYEGL--ADEGHPGLYETAEAAKRVHNLA----KKGEGLAGEPDPGRFQDDAERALHEA 621 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +Q + + D + + + FFD+V+V V+D E+R+NRL LL+ + + Sbjct: 622 SRLARRELQAARAAGDEKRALDAVGHLNRAVHPFFDRVMVLVEDEEIRENRLRLLRDVAD 681 Query: 691 IILIVINVQKIV 702 + ++++ +++V Sbjct: 682 VYNLLLDWRQVV 693 >gi|16766940|ref|NP_462555.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161616719|ref|YP_001590684.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167990886|ref|ZP_02571985.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168241824|ref|ZP_02666756.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260601|ref|ZP_02682574.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194443562|ref|YP_002042901.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448924|ref|YP_002047683.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197264551|ref|ZP_03164625.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|25009333|sp|Q8ZL96|SYGB_SALTY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189082272|sp|A9MUU1|SYGB_SALPB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690224|sp|B4T945|SYGB_SALHS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238693534|sp|B4SWK1|SYGB_SALNS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|16422219|gb|AAL22514.1| glycine tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161366083|gb|ABX69851.1| hypothetical protein SPAB_04538 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402225|gb|ACF62447.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407228|gb|ACF67447.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197242806|gb|EDY25426.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330783|gb|EDZ17547.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339005|gb|EDZ25769.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350246|gb|EDZ36877.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248804|emb|CBG26657.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995905|gb|ACY90790.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160191|emb|CBW19713.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914681|dbj|BAJ38655.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226709|gb|EFX51759.1| Glycyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132015|gb|ADX19445.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990505|gb|AEF09488.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 689 Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 338/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|302185849|ref|ZP_07262522.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae 642] Length = 684 Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 212/716 (29%), Positives = 333/716 (46%), Gaps = 60/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K +L KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKP- 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 123 --TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPQDVRISSPAAYLSDLRAAHVLADFNERRQIISKRVDELAT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F +G Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDVDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAKRSARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPE+QG G YA E A+ E PRG +PT V Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGYYYAKADGEPDDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQFI 529 ++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L +QF Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKFAVTQFG 507 Query: 530 ED-------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 508 AKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRK 567 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ +L+ K I+ + P+Y E LY+ I IQ Sbjct: 568 LPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAIQPMA 624 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 625 AERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|119947319|ref|YP_944999.1| glycyl-tRNA synthetase, beta subunit [Psychromonas ingrahamii 37] gi|166227922|sp|A1T0Y5|SYGB_PSYIN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119865923|gb|ABM05400.1| glycyl-tRNA synthetase, beta subunit [Psychromonas ingrahamii 37] Length = 688 Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 216/724 (29%), Positives = 351/724 (48%), Gaps = 71/724 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + + AE + + L + + + ++R +P RL L + LS Sbjct: 5 NLLIELGTEELPPKSLRQLAESFASNVEAELNKAELSFDSVRWLASPRRLALVIANLSDS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 65 QADKIVEKRGPAVNVAFDAEGQATKAAQGWARSNGITVEQAERLITD--KGEWLLFKSEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ I A+ K+P K MRW + S+ +IRP+ ++ + ++ Sbjct: 123 KGLSVAELIPEIAANALAKLPISKPMRWGS-----SSTQFIRPVHTVTMLF-----GSRL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECRRNAILNDAHR 234 I +L + I GHRF + + D Y L+++ V++D E R+ I + Sbjct: 173 IQGELLGVASDRIIRGHRFLGEAELIIDHADQYETLLDDSGKVIVDYERRKAIIRDQVEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ D+ LLEE+ LVEW +GSF+ K+L +P E + T+K NQK F Sbjct: 233 LAAHENGVADIDESLLEEVTSLVEWPVTLVGSFEDKFLDVPSEALIYTMKDNQKYFPVLD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI + D A ++ GN +V+ RL DA F++ D+ Sbjct: 293 KDGKLLPRFIFVSNIVSRDP-AQVISGNEKVIRPRLADAEFFFETDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L R+ L V+F K+GT E+ RI + + IA I AD RA Sbjct: 340 --------KTLASRLESLS--SVLFQQKLGTLKEKSERIANVAEDIALQIKADTKHAQRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T++V EFP++QG +G YA+ E A+ E PR + +PT+ ++ Sbjct: 390 GLLSKTDLMTDMVMEFPDVQGIMGMHYALHDGEEQEVAIALNEQYLPRFAGDKLPTSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 VSLADKLDTL+ + I + P G+ DP+ALRRA +G++RII +D+ L + +E Sbjct: 450 CAVSLADKLDTLVGIFGIGQAPKGAADPFALRRAAIGLLRIITNKNLDLDLVELVEIAKL 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPENDNLLTIVDLIKHL 577 Q+++ F R + +LI+++L RP VD K L Sbjct: 510 QYGHKLTNDNVVQDVVDFLFARFRATYQANGYSVELIQSVLVRRPTKP-----VDFEKRL 564 Query: 578 N---EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 +F + + + KRI ILA K EI+ ++ P L AE +L ++ Sbjct: 565 QAVAKFQTLPEAAPIAAANKRISNILA---KVKGEINAQVDPSLLQEPAEIKLSEILGSL 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++ D+ Y L S+ EP++ FFD V+V +D ++ NRL++L ++N+ L Sbjct: 622 ESTLRPLFDNLDYESALFELASLNEPVDEFFDNVMVMAEDPAIKANRLAILNRLRNLFLQ 681 Query: 695 VINV 698 + +V Sbjct: 682 IADV 685 >gi|198244903|ref|YP_002217613.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205354738|ref|YP_002228539.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858892|ref|YP_002245543.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690327|sp|B5FLC9|SYGB_SALDC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690461|sp|B5R4P2|SYGB_SALEP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690542|sp|B5RGM2|SYGB_SALG2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197939419|gb|ACH76752.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205274519|emb|CAR39556.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710695|emb|CAR35056.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326625398|gb|EGE31743.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629878|gb|EGE36221.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 689 Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 338/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLSVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|73666637|ref|YP_302653.1| glycyl-tRNA synthetase, beta subunit [Ehrlichia canis str. Jake] gi|72393778|gb|AAZ68055.1| glycyl-tRNA synthetase beta chain [Ehrlichia canis str. Jake] Length = 701 Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 222/743 (29%), Positives = 376/743 (50%), Gaps = 89/743 (11%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEEIP MQ+ A ++ + L + ++++ + TP+RL LY+ + Sbjct: 1 MPLELLFECLSEEIPPEMQNSAYLYINSYIKKELNRYNINFKSIEVFVTPNRLTLYVNNI 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISD---CQIKKDPKKGDVYLAVLRKP 116 S + +R GP+V A K AI+GFL+ + ISD C++ D + Y A + Sbjct: 61 VNSSSNNLLKRKGPKVSADKIAIEGFLKKVN-KKISDLIICKVGND----EFYYAEISNN 115 Query: 117 KRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E+++ +I+ + PW K MRW T ++ WIRP+ +I+CIL K+ Sbjct: 116 IEINTENIISSIIENMLTNFPWDKKMRWGTGNT-----HWIRPIINIMCILDG-----KV 165 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + +I N + G+RF +V+ + YI L++ V+L E R N+IL + Sbjct: 166 LPIKFADIEANNKSRGNRF--TKFFEVKDFNSYISQLKKNNVILCQEERMNSILQQIQNI 223 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 L +++L+ ++ G++E+ V MGS D+K+ LP+ELI L++ N + ++ Sbjct: 224 TEENNLVCENNQNLINKLNGILEYPIVIMGSVDEKFHDLPKELI-LSVMHNHQKYLAAFT 282 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G + N FI +S + AI+ G++ V+ ARL DA +D+ Sbjct: 283 GGKITN-FITISTV----SNDAIISGHNNVLNARLSDASFLINKDK-------------- 323 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRA 414 ++N+D + +L ++VFHAK+G+ E+V+RI L K I+ I + + V+RA Sbjct: 324 EYNIDY------YIEKLK--NIVFHAKLGSVFEKVNRIVALSKYISMWIPHSSLIKVERA 375 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL T V+EFPELQG IG YA NE + ++I H +P + P++ I+ Sbjct: 376 SQLSKFDLSTLAVKEFPELQGIIGGYYASYFNEELEISESIVNHYEPTSSKKECPSSPIT 435 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 I VS++DK D+L+ E+ +GS+DP+++RR + +IR I+EN ++IP+ +E Sbjct: 436 IAVSISDKTDSLVGMIVAGEQVTGSRDPFSIRRMAISVIRTIIENNLNIPIKLLVEKSVS 495 Query: 531 -------DQNLIL---------------------FFHDRLKLYLHDRDIRHDLIEAILRP 562 ++N I FF +R K+ L + I+ D+I A++ Sbjct: 496 LYSYAITEKNAINKIKDVISRKNRRKDIIFYVLEFFSNRFKIMLKEDGIKEDIINAVIES 555 Query: 563 EN-DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 +NLL I LNE+ + G + + + KR+ I IE+ N I+ + P L Sbjct: 556 RKFNNLLIIKKEANLLNEYVFTNNGIEIIKAYKRLSNISDIED--NISITTKQKPNKKLF 613 Query: 622 EA--EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD-DREVR 678 A E LY IS +I++ + ++ + D L++ + F D V VN ++E+ Sbjct: 614 SANEEHDLYKEISYQKNNIKKLIKENKFKESLDNLYNFSCCVNRFMDNVKVNDKMNKELY 673 Query: 679 DNRLSLLQYIKNIILIVINVQKI 701 NR+SL++ I +V + KI Sbjct: 674 KNRISLVKSAFYIFDLVTDFSKI 696 >gi|262282187|ref|ZP_06059956.1| glycyl-tRNA synthetase subunit beta [Streptococcus sp. 2_1_36FAA] gi|262262641|gb|EEY81338.1| glycyl-tRNA synthetase subunit beta [Streptococcus sp. 2_1_36FAA] Length = 679 Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 216/718 (30%), Positives = 359/718 (50%), Gaps = 96/718 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA +GF+R GL T+ D ++ KG+ Y+ V ++ Sbjct: 64 QSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGL-TVEDITFRE--IKGEEYVYVTKE 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +E+++ + V +Q + +P SM W+ + F +IRP+ ++ +L E+ Sbjct: 121 EIGRPVEEIIPAVTEV-LQALTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 170 AFDLDFLDIKSGRTSRGHRFLG-QETEIASADSYEDDLRAQFVIASPLERGDMIVEQIRA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 LEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 289 AEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGE---RVSRIRVLGKKIAQLIDAD 407 ++A D+++ V FH KIG+ E R +I L + A L + Sbjct: 335 -------------KLAIADLVEKLGNVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P Sbjct: 382 AADLARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 442 LPDTKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQ 501 Query: 528 FI-------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++Q +L FF R++ + DR+I D++ A+L+ + DL Sbjct: 502 LVSRLYELEFDSLSYDNQEAVLDFFRARVE-KMMDRNIPKDIVTAVLQSTQ---FVVRDL 557 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI-- 631 ++ A+ + F + + + ++ + EK + + ++P + EK L I Sbjct: 558 VETAALLAEKAQEDNFKSAVESLSRVFNLAEKAQGQTA--VNPALFENQEEKDLATAIEK 615 Query: 632 ----SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 SD T++ D L ++ I+ FFD +V +D VR+NRL+LL Sbjct: 616 VELTSDLATNL-------------DQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALL 660 >gi|54307292|ref|YP_128312.1| glycyl-tRNA synthetase subunit beta [Photobacterium profundum SS9] gi|81828898|sp|Q6LW15|SYGB_PHOPR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|46911712|emb|CAG18510.1| Putative glycyl-tRNA synthetase, beta chain [Photobacterium profundum SS9] Length = 689 Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 219/720 (30%), Positives = 343/720 (47%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE S LK +++Q + + TP RL L + L+ Sbjct: 5 NFLIELGTEELPPKALRTLAEAFSSNFEAELKTAALVHQGIEWFATPRRLALKVTALATG 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + A KA G+ R G+ T+ K +KG+ L Sbjct: 65 QADSVVEKRGPAISAAFDAEGNPTKAAQGWARGNGI-TVEQADTLK-TEKGEWLLYKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L + A+ K+P PK MRW +IRP+K++ +L E + I Sbjct: 123 KGKPAQELLSGLAAAALAKLPIPKPMRWGNNE-----IQFIRPVKTLTMLLGDELIEGNI 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + D I GHRF + + D Y LEE V+ + E R+ IL A + Sbjct: 178 LGAD-----SARIIRGHRFMGEAEFTIDNADQYPAILEERGKVMANYEARKAIILEGAKK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG + +L+EE+ LVEW V SF++ +L +P E + T+K +QK F Sbjct: 233 AALEVGGIADLEDELVEEVTSLVEWPVVLTASFEENFLNVPTEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V+NI++ D I++GN +VV RL DA F+K D+ Sbjct: 293 AEGNLIPKFIFVTNIESKDP-RQIIEGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 340 --------RPLVDRLPELE--KAIFQKQLGTIKDKTDRITELAGYIAEQIGADVTNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEDVALALYEQYMPRFAGDKLPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------S 526 V++ADK+DTL+ + I + P GS DP+ALRRA LG++RII+E + L + Sbjct: 450 AAVAMADKIDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKDYSLDLVDLIAKARA 508 Query: 527 QF--------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 QF +ED+ +I F R + + D D+I A+L +K ++ Sbjct: 509 QFGDKLTNANVEDE-VIDFMLGRFRAWYQDEGHSVDVILAVLALRPTQPADFDKRVKAVS 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F S E + KR+ ILA K + E+ L + LL +AEK L + + Sbjct: 568 HFRSLDAAESLAAANKRVGNILA---KFDGELPLAVDSSLLLEDAEKALAEKVEAMIATL 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y Q L ++ EP++ FFD V+V DD +++ NRL++L ++N L V ++ Sbjct: 625 APVFAEGNYQQALSELATLREPVDAFFDNVMVMADDEKLKVNRLTMLNLLRNEFLKVADI 684 >gi|94968224|ref|YP_590272.1| glycine--tRNA ligase, beta subunit [Candidatus Koribacter versatilis Ellin345] gi|94550274|gb|ABF40198.1| glycyl-tRNA synthetase beta chain [Candidatus Koribacter versatilis Ellin345] Length = 729 Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 232/767 (30%), Positives = 360/767 (46%), Gaps = 107/767 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEE----GVIYQNMRQYWTPHRLFLYL 56 M DFLLEI +EEIPARM A E+L+ + L++ E GV ++ Y TP RL + Sbjct: 1 MADFLLEIGTEEIPARMIDSAREELAKRVSDLVQRERLAEGV---HVESYSTPRRLAVVA 57 Query: 57 KGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 K L P+ E+ +GP G A F + G+ + K KG+ Sbjct: 58 KSLRTSQPDVEEQLMGPSTKVAYKDGEPTPAAHAFAKKAGVDL--NAIEKVSTPKGEYIA 115 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 A + + R ++L ++P I V W KSM W + + ++RP++ ++ +L Sbjct: 116 ATVARKGRSASEILSELLPKEINGVYWAKSMYWRPGKT---SERFVRPVRWMVALL---- 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI-- 228 ++ L+ + GN + GHR + + + HY L A V++D + R I Sbjct: 169 -DNDVVPLEFDGVTAGNRSRGHRILSHGVVTLPDPSHYRDTLAAAAVVVDRKDREYKIRK 227 Query: 229 -LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 L+ A R + G EDKDLL+ ++ L E +GSFD +YL LPEE++ ++ +Q Sbjct: 228 ALDAATR--TITGARWREDKDLLDTVVNLTESPSALLGSFDPEYLSLPEEVLVTVMRDHQ 285 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F G LA F+ V N G I GN RV+ AR DA FW DQ Sbjct: 286 KYFAVEDAGGKLAPHFLAVLNTNGDPDGL-IRHGNERVLRARFNDARFFWNTDQK----- 339 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 LDL + R+++L V F +G+ ++ R + L IA++ Sbjct: 340 -----------LDLRQ-------RVELLKSVTFQKDLGSYYDKTCRFQKLASLIAEVAMQ 381 Query: 404 --IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC--------CD 453 I +V +A +LSK DL TE+V+EF ELQG +G YA Q E + C D Sbjct: 382 AGITVRAGVVHKAALLSKTDLTTELVKEFTELQGVVGGLYAKAQGERLDCNQEVANAIGD 441 Query: 454 AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 + +H KP ++VP + V++ADK DT+ +A+ PSGSKDP+ALRRA G++ Sbjct: 442 VVYDHYKPVSMDDSVPRSIEGAIVAVADKADTIAGMFALGLIPSGSKDPFALRRAANGVV 501 Query: 514 RIILENKIDIPLSQFIED---------------------QNLILFFHDRLKLYLHD-RDI 551 +II E+K+ I L +D +N+ F +RL YL + + Sbjct: 502 KIIAEHKLPISLRTTFDDARTEYKGSEAELRFAADDKCTENIAAFMRERLDFYLREVKGF 561 Query: 552 RHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL-LSA--KRIFQILAIEEKKNR 608 +D++ A+L D+ +VD I + E F+ +SA KR+ IL E+K Sbjct: 562 HYDVVNAVLASNADD---VVDAIARAEAVTAVRGSEDFIAVSAAFKRMKNILKQAEEKKV 618 Query: 609 EISLEI-----SPQYLLLEAEKR--------LYAVISDFGTHIQESMDHKRYHQIGDLLH 655 + + S ++ + E EKR L D +Q ++ K Y + L+ Sbjct: 619 HPLMNLGEDVASVRFKMEEYEKRAEHPEEAALIRAFMDVSPRVQAAVQLKSYQEAVSLVA 678 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + +P++ FFD+V+V VDD + R RL LL I + I+ + +IV Sbjct: 679 GLRKPVDAFFDKVMVMVDDEQKRTARLLLLLAIVSQFEIIADFSEIV 725 >gi|254483305|ref|ZP_05096536.1| glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2148] gi|214036400|gb|EEB77076.1| glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2148] Length = 692 Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 206/722 (28%), Positives = 347/722 (48%), Gaps = 61/722 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+E+ +EE+P + + LK+ + + + + +P RL + + + Sbjct: 6 LLIELGTEELPPKALKSLGLAFRDGITAGLKQRELGFGEVSWFASPRRLAVQIAQVQTQG 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 +K E LGP + G A GF + G+ D Q + PK L + + Sbjct: 66 EDKDIEVLGPPIDRARDSEGNWTPAASGFAKKQGV-AAQDLQEIETPK--GTRLGLKKTE 122 Query: 117 KRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 L D L I+ I +P PK MRW S ++RP++ ++ +L + KI Sbjct: 123 AGLHTSDCLNDIIVETIAGLPIPKRMRWGA-----SRVEFVRPVQWLIAMLGEKFDHGKI 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + IP GN T GHRFH+ I ++ D Y L A V+ + + R+ I Sbjct: 178 LG-----IPTGNTTRGHRFHSSGDILLEKADDYEEVLANAHVVANFDKRQAMIREQVEAE 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ASAV V D DLL+E+ GLVEW GSF++++L +P E + ++K +QK F Sbjct: 233 ASAVNASAVIDPDLLDEVTGLVEWPVALTGSFEERFLEVPAEALISSMKEHQKYFHLVDA 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI ++NI++ D ++ GN RV+ RL DA F Sbjct: 293 NGELKPNFITLANIESKDP-VQVIAGNERVIRPRLADAAFF------------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F D PL +R A+L+ V+F K+GT ++ R++ L +A++I AD +R+ Sbjct: 333 -FETDKKTPLAKRAAKLET--VIFQQKLGTLADKARRVQKLAGSLARMIGADADKAERSA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL T++V+EF ++QG G YA+ E+ AI + P+ + +P + + Sbjct: 390 LLAKADLVTDMVQEFSDMQGVAGSYYALHDGEDAEVAAAIAQQYWPKFAGDRLPESNTAC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 + LAD+LDTL+ + I + P+GSKDP+ALRRA+L ++RII+E K+++ L +E Sbjct: 450 ALGLADRLDTLVGIFGIGQPPTGSKDPFALRRASLAVLRIIVEKKLELDLRDCLELATQQ 509 Query: 531 -DQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 Q+L+ + +R + + + +I ++ A+ L I + +N F Sbjct: 510 YPQDLLAEGTTDQVFDYMIERFRAWYEEENIPVEVFRAVSARRISQPLDIQQRVLAVNAF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ IL + N E+ L AEK L +S T Sbjct: 570 SQLPEASALAAANKRVSNILG--KLSNDHSFGEVRVNLLQEAAEKELTENLSALSTIASG 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y L + P++ FFD+V+VN ++ +R+NRL+LL+ +++ L V ++ + Sbjct: 628 HLEKGEYSAALASLAGLRAPVDRFFDEVMVNAENEALRNNRLNLLKALRDQFLEVADISQ 687 Query: 701 IV 702 +V Sbjct: 688 LV 689 >gi|330985731|gb|EGH83834.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. lachrymans str. M301315] Length = 684 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 210/716 (29%), Positives = 332/716 (46%), Gaps = 60/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K + KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTIHGKP- 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 123 --TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELAT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F EG Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A IV GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPE+QG G YA E A+ E PRG +PT V Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 ++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFG 507 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 508 AKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRK 567 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ +L+ K I+ + P+Y E LY+ I +Q Sbjct: 568 LPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMA 624 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 625 AERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADL 680 >gi|229587588|ref|YP_002869707.1| glycyl-tRNA synthetase subunit beta [Pseudomonas fluorescens SBW25] gi|259511929|sp|C3KE40|SYGB_PSEFS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229359454|emb|CAY46295.1| glycyl-tRNA synthetase beta chain (ec 6.1.1.14) (glycine--trna ligase beta chain) (glyrs) [Pseudomonas fluorescens SBW25] Length = 684 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 204/721 (28%), Positives = 339/721 (47%), Gaps = 64/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + A+ + L G+ ++ + Y P RL + L L Sbjct: 5 DFLVELGTEELPPKALNTLADAFLAGIEKGLHSAGLKFEAKKVYAAPRRLAVLLTALETQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G++ +I + K + K Sbjct: 65 QPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGVEL---SEIDQSGPKLRFSQVITGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P PK MRW ++RP + ++ +L +++ Sbjct: 122 P---TASLLPTIVEDSLNDLPIPKRMRWGARKE-----EFVRPTQWLVMLL-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID L G + GHRFH P +++ S +Y DL A VL D RR I L Sbjct: 169 IDCTLLAQKAGRDSRGHRFHHPQAVRITSPANYAADLRAAYVLADANERRELISKRTEEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ARLQEGTAIVPPSLLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDV 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-QQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FNL L +VVF K+G+ ++ R+ L IAQ I D A RA Sbjct: 339 DFNLRLQ-------------NVVFQEKLGSVYDKAVRVSKLAAYIAQRIGGDAAWAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +PT Sbjct: 386 LLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPDDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI+++ K+D+ L+Q + Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLTQAVVFAVGQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKVKQAGLAEQVLEFVFDRLRARYEDEGVDVSVYLSVRALQPGSALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ +L+ E + ++ P E L + I+ ++ Sbjct: 566 RKLPEADALASVNKRVSNLLSKAEGLG---NADVDPGLFADAKEFSLNSAIAKAENAVKP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + Y + L ++ EP++ FF+ V++N +D VR NR ++L ++ + + + ++ Sbjct: 623 LIAERNYAEALARLATLREPVDAFFEAVMINAEDAGVRKNRYAMLARLRGLFVNIADIST 682 Query: 701 I 701 + Sbjct: 683 L 683 >gi|258508508|ref|YP_003171259.1| glycyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus GG] gi|257148435|emb|CAR87408.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus GG] gi|259649818|dbj|BAI41980.1| glycyl-tRNA synthetase beta subunit [Lactobacillus rhamnosus GG] Length = 689 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 205/730 (28%), Positives = 346/730 (47%), Gaps = 76/730 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L+EI E++PA + + + LK + + + +Y TP RL L + L+ Sbjct: 4 DYLIEIGLEDMPAHVVTPSINQFHDKTVAFLKANHLEHGQIDRYATPRRLALLVHDLAAK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + GP G KA GF R G+ T D K VYL K Sbjct: 64 QADVETDVKGPAKKIAQDADGNWTKAAIGFSRGQGM-TPDDIVFKTIKGVDYVYLHKAIK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K E +L ++ V I+ + +P M+W F +IRP+ ++ +L + + Sbjct: 123 GKDAAE-ILPGMLDV-IKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDTV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + L ++ G +T GHRF P+ + + D Y+ L++ V+++P R+ I ++ Sbjct: 171 VPMKLLDVEAGRVTQGHRFLG-KPVTLPNADAYVAALKDQFVIVEPAARKQLIREQIEQI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ ++ D DLLEE+ LVEW F G+FD KYL +PE ++ ++K NQ+ F R + Sbjct: 230 ATDHQWQIELDSDLLEEVNNLVEWPTAFAGTFDPKYLAIPEAVLITSMKDNQRYFYARDQ 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G + N FI V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 290 AGKMVNAFIGVRNGN-HDHLNNVIAGNEKVLTARLEDAAFFYAEDQK------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 + + + + RL V FH KI + ++++R +V+ +A L + A +D Sbjct: 336 -------RSIAEDVERLKA--VSFHDKISSMYDKMARTKVIAALLADQFGLTADEKADLD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 387 RAASIYKFDLVTSMVGEFPELQGIMGEHYARLAGEKPAVAQAIAEHYEPIAADGALPQSL 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---- 528 + +++ADKLD+L++F+A++ PSGS DPYALRR GI+R+I E+ L+ Sbjct: 447 VGTVLAIADKLDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAEHDWPFALASLQPTI 506 Query: 529 ----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 Q L F DR K L + IRHD+++A+ + ++ I+ Sbjct: 507 AKALAEADQTNGLDFAAHQQELNDFMIDRAKQLLQGQKIRHDIVDAVTVRSDADIAGILA 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K L + + + + + + R+ +I + ++ + P E +L+ ++ Sbjct: 567 AAKLLTQHAADSDFKPVMEALGRVLRITG-----KQTVTTAVDPTKFENPTEGQLHDAVT 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 Y L ++ +PI+ +FD +V DD+ VR+NRL+ LQ + +I Sbjct: 622 TTAKTFAAEPTEADYQA----LKALAKPIDAYFDATMVMADDKTVRENRLATLQQLAKLI 677 Query: 693 LIVINVQKIV 702 +V +++ Sbjct: 678 RQFGDVSQVI 687 >gi|71066328|ref|YP_265055.1| glycyl-tRNA synthetase subunit beta [Psychrobacter arcticus 273-4] gi|71039313|gb|AAZ19621.1| glycyl-tRNA synthetase, beta subunit [Psychrobacter arcticus 273-4] Length = 697 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 206/733 (28%), Positives = 350/733 (47%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ EE+P + + L I + + +++ + P RL + +KG+S Sbjct: 1 MSTILFELGCEELPPKSLKTLRDALQQSFIIQSAAANITFDSIKAFVAPRRLAIQIKGIS 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ EE+ GP + A +A GF + G++ I D KGD V Sbjct: 61 AKQPDRTEEKRGPAIKAAFDAEGNPTRAAMGFAKGLGIEASELTTINTD--KGDYVGYVQ 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L TI A+ +P K MR + + ++RP++ +L+ +DA Sbjct: 119 TVQGQATTELLPTIFQTALDNLPIAKRMRSGASRN-----EFVRPVQ--WAVLMQDDA-- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ ++ GN T GHRFH+P + + Y + L+ V+ D + R+ I N Sbjct: 170 -VINATIQGHQTGNQTRGHRFHSPDYHTIAHANDYEQLLDGLKVVADFDKRQMLIKNQVK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V + + + LL+E+ LV++ SF+ ++L +P+E + T++ +QK F Sbjct: 229 ALADEVNSDAIVPQSLLDEVTALVDFPIALRASFEPRFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI ++NI++ D I++GN +VV RL DA F+ +DQ L L E Sbjct: 289 DKEGKLQPYFIFITNIESKDP-KQIIEGNEKVVRPRLADAEFFFLQDQKQ--PLFVLTE- 344 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 ++ + VF K+GT E+ RI L IA L+ +D Sbjct: 345 -------------------NLKNRVFQDKLGTIWEKSERIAKLAAFIATLMQQQGQEIDI 385 Query: 413 ----RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +LSKADL + +V E+PELQG G YA L NE + ++EE P+ + + Sbjct: 386 NETVRAGILSKADLASSLVGEYPELQGIAGTYYARLNNEPEAVAASLEEQYLPKFSGDVL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + I ++LAD+LDTL+ +AI + P+GSKDP++LRR+ +GI+RI++E ++ I L Sbjct: 446 PKTAVGICLALADRLDTLVGIFAIGQAPTGSKDPFSLRRSAIGILRILIEKQLPINLVAL 505 Query: 529 IED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 +E ++ F + R + ++ + D I+A+ L Sbjct: 506 VEQAIKGYSTSDGSKIAKMGDTFTQVMAFLNSRYRAMYTEQGVSVDTIQAVQAINPHMPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ + F + S KR+ ILA K ++ E++ L E EK LY Sbjct: 566 DFDQRIRAVQTFSELPQASMLADSNKRVANILA---KSEGAVANEVNASLLTEEVEKSLY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + +D Y Q+ L S+ P+ FF V+VN +D ++ NRL+LL+ + Sbjct: 623 QTVQQAQLDVMPLLDTANYTQVLQTLVSLDAPLTQFFADVMVNSEDAALKANRLALLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V ++ ++ Sbjct: 683 RALFLTVADISEL 695 >gi|224585454|ref|YP_002639253.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254781860|sp|C0Q1B6|SYGB_SALPC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|224469982|gb|ACN47812.1| glycyl-tRNA synthetase beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 689 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 337/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN ++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAKEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|330952323|gb|EGH52583.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae Cit 7] Length = 684 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 210/718 (29%), Positives = 335/718 (46%), Gaps = 64/718 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + + G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGITGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G+ +I + K +L K Sbjct: 65 QPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDL---SEIDQSGPKLRYSQTILGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P K MRW ++RP + ++ + +++ Sbjct: 122 P---TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 VDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISQRVDEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDV 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN L +VVF A++G+ ++ R+ L IA I D RA Sbjct: 339 TFNDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 386 LLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQ 527 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L +Q Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKFAVTQ 505 Query: 528 FIED-------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + KR+ +L+ K I+ + P+Y E LY+ I IQ Sbjct: 566 RKLPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAIQP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 623 MAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|325131653|gb|EGC54359.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M6190] gi|325137516|gb|EGC60099.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis ES14902] Length = 686 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 208/660 (31%), Positives = 339/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 49 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 107 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 108 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 161 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + N T GHRF + I +++ D Y + + V+ Sbjct: 162 HGLIVLHGGD-----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVV 216 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 217 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 276 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 277 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 335 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 336 QDQK--------------------ATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 373 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +A+E+H Sbjct: 374 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQH 433 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 434 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 493 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 494 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 552 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 553 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 608 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 609 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 668 >gi|62182160|ref|YP_218577.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|81309553|sp|Q57IG6|SYGB_SALCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|62129793|gb|AAX67496.1| glycine tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716647|gb|EFZ08218.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 689 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 337/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + N+ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLEHGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN ++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAKEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|257865840|ref|ZP_05645493.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257872175|ref|ZP_05651828.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257799774|gb|EEV28826.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257806339|gb|EEV35161.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 696 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 211/725 (29%), Positives = 347/725 (47%), Gaps = 87/725 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L + Y + Y TP RL +Y+ G+ + EE GP Sbjct: 21 PAHVVTPSMKQLQEKTAAFLDAHALPYTTIEAYSTPRRLAVYVTGIPEKQADTQEEVKGP 80 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T D ++ VY+ + + +E VLK Sbjct: 81 AKKIALDDAGNWSKAAQGFVRGQGL-TTDDITFRELKGVEYVYVTKHTQGQPTVE-VLKG 138 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V I + +P +M W+ F +IRP+ I+ + E++I + +I G Sbjct: 139 LQEV-ITSLTFPVTMHWADYD-----FEYIRPIHWIVALF-----GEQVIPFQILDIVTG 187 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 + GHRF + D Y+ ++ V+ DP R+ I + +A + D Sbjct: 188 RESKGHRFLG-EAVTFDHADDYLEKMKHQFVIADPSERQQMITAQINAIAQENNWRIDLD 246 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLLEE+ LVE+ F+G F++KYL +PEE++ ++K +Q+ F RT +G L FI Sbjct: 247 EDLLEEVTNLVEYPTAFVGDFEEKYLSVPEEVLVTSMKEHQRYFDVRTLDGELLPHFI-- 304 Query: 307 SNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 A +G A +++GN +V+ ARLEDA F +N D Sbjct: 305 ---SARNGDAVKIDNVIKGNQKVLTARLEDAEFF--------------------YNEDKK 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADVALVDRAIVLS 418 +D + +L V FH KIG+ E++ R+ +++GK + L ++ + RA + Sbjct: 342 LTIDHCVEKLKQ--VTFHEKIGSLYEKMQRVGLAAQIIGKTVG-LTQEELTDLQRAAQIY 398 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFPELQG +G++YA++Q E + AI EH P +P +KI ++ Sbjct: 399 KFDLVTNMVGEFPELQGIMGEKYALIQGEKPAVAQAIREHYMPISAEGELPQSKIGAVLA 458 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +ADKLD+L+ F+A++ PSGS DPYALRR T GIIRI+ E + P +Q E+ Sbjct: 459 IADKLDSLLAFFAVDMVPSGSNDPYALRRQTYGIIRILAEKRWYFPFAQLQEEIREAINA 518 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F RL+ +L ++ RHD+IEA+L ++ T+ + + L Sbjct: 519 QPEVFGIQLAAGQEQVTDFVKGRLRQFLLSKNTRHDVIEAVLGARQADISTLFETAQMLR 578 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY-AVISDFGTH 637 E + + + R+ + KK I P ++E LY AV++ Sbjct: 579 EHLQDTDFKPSMEALTRVINLA----KKAELDQAAIDPALFENDSETALYEAVLT----- 629 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +++ H+ + L ++ IE +FDQ +V V+D ++R NR +LL I + L V + Sbjct: 630 VEDKFPHQTMEENYQSLVALRPLIEAYFDQTMVMVEDEQIRRNRFALLDKIAKMSLAVAS 689 Query: 698 VQKIV 702 + ++ Sbjct: 690 LDALI 694 >gi|94272282|ref|ZP_01292098.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] gi|93450178|gb|EAT01487.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] Length = 694 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 229/729 (31%), Positives = 358/729 (49%), Gaps = 76/729 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI SEEIPA A L L L E + + + TP RL + ++ L+ Sbjct: 5 ELLFEIGSEEIPAGYIKPALIALQNGLARGLAERELTHGQLYTAATPRRLTVAVQDLAAS 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 PE+ EE LGP G +A GF S GL T+ QI+ PK GD AV ++ Sbjct: 65 QPERQEEVLGPAKKAAFDEAGNPTRAATGFAASRGL-TVEQLQIRSTPK-GDYLAAVTQR 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R ++L ++P I +P+PKSMRW + RPL+ +L + + Sbjct: 123 RGRQTAELLSELLPELILSLPFPKSMRWGA-----GKIHFARPLRWLLAVYDGQP----- 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D L +P GN + GHRF AP + + S + Y+ L +A VL D + RR A++ + Sbjct: 173 LDFTLDGLPAGNRSRGHRFMAPQALTITSYEQYLEQLRQASVLADLDERRQAVVAGVEQA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G ++ D +L+ + LVE GSFD+++L LP E++ +++ +QK F Sbjct: 233 AQATGGRVLADPELVATVTNLVESPHALAGSFDQRFLQLPREVLITSLREHQKYFAVVDE 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L F+ V+N + D VQG+ RV+ ARLEDAL F+ DQ + Sbjct: 293 QGRLLPRFVAVNNTRVRDPQLG-VQGHQRVLRARLEDALFFFNEDQQH------------ 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDRA 414 PL + L V+F AK+G+ + R++ L ++++ D V RA Sbjct: 340 --------PLSELAGNLH--GVIFQAKLGSMAHKSGRLQELAGRLSREFAPDEEETVTRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EFP LQG IG++YA Q E + +AI H P +P ++ Sbjct: 390 AHLCKADLLTNMVGEFPSLQGVIGRDYARRQGEPEAVAEAIHSHYLPLRAGGELPADRAG 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 + +AD+LDTL + I K +G+ DP+ LRR LG+I ++L ++I +PL+ +++ Q L Sbjct: 450 AILGIADRLDTLAGCFGIGLKTTGAADPFGLRRQALGLIHLLLGHQIPLPLTPWLK-QAL 508 Query: 535 ILF----------FHDRLKLYLHDRDIRHDL---------IEAILRPENDNLLTIVDLIK 575 L+ RL+ ++ R +DL +EA+L + D L D + Sbjct: 509 ALYADRLSDDPDTTAGRLRDFIRHR-FANDLTRQGLPAAAVEAVLSVDGDEL---NDAKR 564 Query: 576 HLNEFFSSAKGEKFLLSA---KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + +++ E F L A KR+ I+ K NR+ I P L+ AEK+L A ++ Sbjct: 565 RIEALVAASGRESFTLLAGAFKRVNNII----KDNRDT--RIDPDLLIEPAEKKLAAALA 618 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + Y Q + + + EP++ FFDQV+V + E+R NRL+LL + + Sbjct: 619 KITAGTAPLLAAGNYQQALEEILEMKEPVDAFFDQVMVMAKEEELRRNRLALLTAVARLF 678 Query: 693 LIVINVQKI 701 L V + K+ Sbjct: 679 LRVGDFSKM 687 >gi|294638314|ref|ZP_06716567.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda ATCC 23685] gi|291088567|gb|EFE21128.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda ATCC 23685] Length = 689 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 203/723 (28%), Positives = 343/723 (47%), Gaps = 71/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + A+ + L G+ + ++ + P RL L + L Sbjct: 6 FLVEIGTEELPPKALRSLAQAFADNFRSELDNAGLAHGDIAWFAAPRRLALKVAALDAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L ++ Sbjct: 66 PDREIEKRGPAIAQAFDADGKPTKAAEGWARGCGISVEQAERLTTD--KGEWLLYRAQQK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +++L T+V A+ ++P PK MRW + ++RP+ ++ +L +E I+ Sbjct: 124 GQRAQELLPTLVANALSRLPIPKLMRWGANDT-----QFVRPVHTVTLLLGSESIPATIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 179 G-----IQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAQIKRDAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AARIGGQADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 +G L FI V+N+ + D I+ GN +VV RL DA F+K D ++NLP L S Sbjct: 294 QGKLLPNFIFVANVDSKDA-QQIIAGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLES- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++G+ ++ RI L IAQ I ADV + Sbjct: 352 --------------------------VLFQQQLGSLRDKTDRIAALAGWIAQQIGADVNM 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E ++ E PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVSLNEQYMPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L + Sbjct: 446 SLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLLTLTQ 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++++ F R + + + D I+A+L ++ Sbjct: 506 EAVRLYGDKLSNAKVVEDVVDFMLGRFRAWYQEEGHAVDTIQAVLARRPTRPADFDARVR 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ ++ L AE RL A + Sbjct: 566 AVSHFRTLDEAATLAAANKRVSNILA---KSSDTLADQVQATLLKEAAEIRLAANLITLQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Y + L ++ +P++ FF+QV+V DD +VR NRL+LL ++++ L V Sbjct: 623 EKLAPLFAAGQYQEALVELATLRQPVDDFFEQVMVMADDEQVRINRLTLLSKLRDLFLQV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|261867209|ref|YP_003255131.1| glycyl-tRNA synthetase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412541|gb|ACX81912.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 693 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 211/724 (29%), Positives = 348/724 (48%), Gaps = 67/724 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATAFADNVQAELNQAGLAFDKIEWFAAPRRLAVKVLALATQ 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QPGKEIEKRGPAVSAAFDAEGNPTKAAEGWARGCGITVDQAERLATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLADIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTIRGHRFLGEREFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF---- 290 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPLYK 292 Query: 291 -VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 ++G L FI VSNI D +AI++GN +VV RL DA F Sbjct: 293 KTEGDKDGKLLPHFIFVSNINPDDP-SAIIEGNEKVVRPRLTDAEFF------------- 338 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F DL + L R+ RL+ V+F ++GT ++ RI L IA+ I AD A Sbjct: 339 -------FKTDLKQKLVDRLPRLET--VLFQQQLGTLRDKTDRIEQLAGAIAKQIGADEA 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P Sbjct: 390 KAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + ++ V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 KSLVASAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLV 509 Query: 530 E-----------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++N++ F R + + D I D+I+A+L + Sbjct: 510 QKSAALFGDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + ++ F + E + KR+ ILA + EI+L + AEK L + Sbjct: 570 RAVSHFRTLDSAEALAAANKRVANILAKADVAIGEINLIACVE----SAEKNLAEAVLVL 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 T +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L Sbjct: 626 QTEVQPLIAKGEYTAVLDKLANLRTPVDNFFDNVMVNAEDPTLRQNRLAILNTLQGLFLQ 685 Query: 695 VINV 698 V ++ Sbjct: 686 VADI 689 >gi|16762654|ref|NP_458271.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144141|ref|NP_807483.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163579|ref|ZP_03349289.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428105|ref|ZP_03360855.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580726|ref|ZP_03362552.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609113|ref|ZP_03368939.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649464|ref|ZP_03379517.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213854638|ref|ZP_03382878.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25009331|sp|Q8Z2B3|SYGB_SALTI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|25293205|pir||AI0980 glycine-tRNA ligase (EC 6.1.1.14) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504960|emb|CAD07973.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29139778|gb|AAO71343.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 689 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 210/722 (29%), Positives = 341/722 (47%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAYVKGE 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 126 S--TEALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNASVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|300719083|ref|YP_003743886.1| glycyl-tRNA synthetase beta subunit [Erwinia billingiae Eb661] gi|299064919|emb|CAX62039.1| Glycyl-tRNA synthetase beta subunit [Erwinia billingiae Eb661] Length = 689 Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 213/723 (29%), Positives = 333/723 (46%), Gaps = 71/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + + Y P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRNLAESFAAHFTAELDTAGLTHGAVSWYAAPRRLALKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 PDREVEKRGPAIAAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLLYRAQVT 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V ++ K+P PK MRW S ++RP+ ++ +L E I+ Sbjct: 124 GESAQSLLPAMVSTSLAKLPIPKLMRWGD-----SDVQFVRPVHTVTLLLGDESLPATIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + G GHRF + + D Y + L E V D E R+ I DA Sbjct: 179 G-----VASGRTIRGHRFMGEPEFTIDNADQYPQILLERGKVQADYEVRKAQIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AREIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDT 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI + D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVTNIVSKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNSDRKKRLEDNLPRLET--VLFQKELGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPENDNLLTIVDLIK 575 +I F R + + + D I+A+L RP + N +K Sbjct: 511 YGSKLSNGKVVDEVIDFMLGRFRTWYQEEGHSVDTIQAVLARRPTRPADFNA-----RMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ +S L E +L +S Sbjct: 566 AVSHFRTLEEAATLAAANKRVSNILA---KATEPLNDSVSASLLKENEEIQLATYVSALT 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + ++ FF++V+VN ++REVR NRL+LL ++ + L V Sbjct: 623 SKLQPYFAEGRYQDALIELAQLRTAVDNFFEKVMVNAEEREVRINRLTLLAKLRELFLQV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|94264056|ref|ZP_01287856.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] gi|93455567|gb|EAT05754.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] Length = 694 Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 229/729 (31%), Positives = 358/729 (49%), Gaps = 76/729 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI SEEIPA A L L L E + + + TP RL + ++ L+ Sbjct: 5 ELLFEIGSEEIPAGYIKPALIALQNGLARGLAERELTHGQLYTAATPRRLTVAVQDLAAG 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 PE+ EE LGP G +A GF S GL T+ QI+ PK GD AV ++ Sbjct: 65 QPERQEEVLGPAKKAAFDEAGNPTRAATGFAASRGL-TVEQLQIRSTPK-GDYLAAVTQR 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R ++L ++P I +P+PKSMRW + RPL+ +L + + Sbjct: 123 RGRQTAELLSELLPELILSLPFPKSMRWGA-----GKIHFARPLRWLLAVYDGQP----- 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D L +P GN + GHRF AP + + S + Y+ L +A VL D + RR A++ + Sbjct: 173 LDFTLDGLPAGNRSRGHRFMAPQALTITSYEQYLEQLRQASVLADLDERRQAVVAGVEQA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G ++ D +L+ + LVE GSFD+++L LP E++ +++ +QK F Sbjct: 233 AQATGGRVLADPELVATVTNLVESPHALAGSFDQRFLQLPREVLITSLREHQKYFAVVDE 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L F+ V+N + D VQG+ RV+ ARLEDAL F+ DQ + Sbjct: 293 QGRLLPRFVAVNNTRVRDPQLG-VQGHQRVLRARLEDALFFFNEDQQH------------ 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDRA 414 PL + L V+F AK+G+ + R++ L ++++ D V RA Sbjct: 340 --------PLSELAGNLH--GVIFQAKLGSMAHKSGRLQELAGRLSREFAPDEEETVTRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EFP LQG IG++YA Q E + +AI H P +P ++ Sbjct: 390 AHLCKADLLTNMVGEFPSLQGVIGRDYARRQGEPEAVAEAIHSHYLPLRAGGELPADRAG 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 + +AD+LDTL + I K +G+ DP+ LRR LG+I ++L ++I +PL+ +++ Q L Sbjct: 450 AILGIADRLDTLAGCFGIGLKTTGAADPFGLRRQALGLIHLLLGHQIPLPLTPWLK-QAL 508 Query: 535 ILF----------FHDRLKLYLHDRDIRHDL---------IEAILRPENDNLLTIVDLIK 575 L+ RL+ ++ R +DL +EA+L + D L D + Sbjct: 509 ALYADRLSDDPDTTAGRLRDFIRHR-FANDLTRQGLPAAAVEAVLSVDGDEL---NDAKR 564 Query: 576 HLNEFFSSAKGEKFLLSA---KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + +++ E F L A KR+ I+ K NR+ I P L+ AEK+L A ++ Sbjct: 565 RIEALVAASGRESFTLLAGAFKRVNNII----KDNRDT--RIDPDLLIEPAEKKLAAALA 618 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + Y Q + + + EP++ FFDQV+V + E+R NRL+LL + + Sbjct: 619 KITAGTAPLLAAGNYQQALEEILEMKEPVDAFFDQVMVMAKEEELRRNRLALLTAVARLF 678 Query: 693 LIVINVQKI 701 L V + K+ Sbjct: 679 LRVGDFSKM 687 >gi|257875468|ref|ZP_05655121.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257809634|gb|EEV38454.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 696 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 211/725 (29%), Positives = 347/725 (47%), Gaps = 87/725 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L + Y + Y TP RL +Y+ G+ + EE GP Sbjct: 21 PAHVVTPSMKQLQEKTAAFLDAHALPYTTIEAYSTPRRLAVYVTGIPEKQADTQEEVKGP 80 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T D ++ VY+ + + +E VLK Sbjct: 81 AKKIALDEAGNWSKAAQGFVRGQGL-TTDDITFRELKGVEYVYVTKHTQGQPTVE-VLKG 138 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V I + +P +M W+ F +IRP+ I+ + E++I + +I G Sbjct: 139 LQEV-ITSLTFPVTMHWADYD-----FEYIRPIHWIVALF-----GEQVIPFQILDIVTG 187 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 + GHRF + D Y+ ++ V+ DP R+ I + +A + D Sbjct: 188 RESKGHRFLG-EAVTFDHADDYLEKMKHQFVIADPSERQQMITAQINAIAQENNWRIDLD 246 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLLEE+ LVE+ F+G F++KYL +PEE++ ++K +Q+ F RT +G L FI Sbjct: 247 EDLLEEVTNLVEYPTAFVGDFEEKYLSVPEEVLVTSMKEHQRYFDVRTLDGELLPHFI-- 304 Query: 307 SNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 A +G A +++GN +V+ ARLEDA F +N D Sbjct: 305 ---SARNGDAVKIDNVIKGNQKVLTARLEDAEFF--------------------YNEDKK 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADVALVDRAIVLS 418 +D + +L V FH KIG+ E++ R+ +++GK + L ++ + RA + Sbjct: 342 LTIDHCVEKLKQ--VTFHEKIGSLYEKMQRVGLAAQIIGKTVG-LTQEELTDLQRAAQIY 398 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFPELQG +G++YA++Q E + AI EH P +P +KI ++ Sbjct: 399 KFDLVTNMVGEFPELQGIMGEKYALIQGEKPAVAQAIREHYMPISAEGELPQSKIGAVLA 458 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +ADKLD+L+ F+A++ PSGS DPYALRR T GIIRI+ E + P +Q E+ Sbjct: 459 IADKLDSLLAFFAVDMVPSGSNDPYALRRQTYGIIRILAEKRWYFPFAQLQEEIREAINA 518 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F RL+ +L ++ RHD+IEA+L ++ T+ + + L Sbjct: 519 QPEVFGIQLAAGQEQVTDFVKGRLRQFLLSKNTRHDVIEAVLGARQADISTLFETAQMLR 578 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY-AVISDFGTH 637 E + + + R+ + KK I P ++E LY AV++ Sbjct: 579 EHLQDNDFKPSMEALTRVINLA----KKAELDQAAIDPALFENDSETALYEAVLT----- 629 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +++ H+ + L ++ IE +FDQ +V V+D ++R NR +LL I + L V + Sbjct: 630 VEDKFPHQTMEENYQSLVALRPLIEAYFDQTMVMVEDEQIRRNRFALLDKIAKMSLAVAS 689 Query: 698 VQKIV 702 + ++ Sbjct: 690 LDALI 694 >gi|260655940|ref|ZP_05861409.1| glycyl-tRNA synthetase, beta subunit [Jonquetella anthropi E3_33 E1] gi|260629556|gb|EEX47750.1| glycyl-tRNA synthetase, beta subunit [Jonquetella anthropi E3_33 E1] Length = 686 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 219/720 (30%), Positives = 349/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D + EI +EEIPAR A L L++E + + + Y TP RL L+L+ + Sbjct: 4 DLVFEIGTEEIPARFMTDALAALKAAAADELEKERIRVRRVDTYGTPRRLVLFLRDVPDR 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G +A +GF +S G+ +SD I+K D A Sbjct: 64 QDDLCEEFKGPAWKNCFDVNGYPTRAAEGFAKSRGVD-VSDL-IRKPSGNVDYAFAQKSA 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +E+VL ++ K+ +PK+M WS P F+ RP++ ILC+L +K+ Sbjct: 122 SGLPVEEVLPALLTRVAGKLVFPKNMFWS---DPTVRFA--RPIRWILCLL-----GDKV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++L + G +T GHRF ++V Y+ L + V++D E RR +L + Sbjct: 172 IPVELSGVKSGRVTRGHRFMGCSAVEVPDAASYLSVLYDQSVIVDQEKRREKMLAAIASI 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +G + + L+EE + LVE+ F G FD KYL LPEE++ ++K NQK F R+ Sbjct: 232 ERELGGTVELEDGLVEENLYLVEYPVPFAGKFDPKYLLLPEEVLITSMKVNQKYFPVRSS 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ VSN + + I +GN RV+ ARLEDA FW+ D Sbjct: 292 SGKLLAMFVGVSNNKPATMDL-IREGNERVLRARLEDAAFFWQED--------------- 335 Query: 356 KFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVD 412 L KPL ARLD L VV+ K+G+ ++ + +A ++ A+ LV Sbjct: 336 -----LKKPLS---ARLDGLKQVVYQEKLGSVYDKTQWMTGYAVWLADQLNLGAEKTLVQ 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSK DL T++V EFPELQG +G+ YA E+ A+EE PR + VPT+ Sbjct: 388 RAAQLSKTDLITQMVGEFPELQGVMGRAYAKENGEDPRVALALEEQYLPRSAGDKVPTDI 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 + V LA+++ +++ + + +PSGS+DPY LRRA + I+ KID+ + + +++ Sbjct: 448 VGALVGLAERIFSMVGAYKLGFRPSGSQDPYGLRRAVRCVNEILWALKIDLDMGKALDEA 507 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++L + R L ++ HDL+ E N + L+K + Sbjct: 508 CRTLSLDEEAQKSLREYVASRTFGQLKEQGFPHDLVALAADAEGSNPWQELCLLKAYSSV 567 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + A +A R+ ILA + + Q ++AEK L+ + I + Sbjct: 568 SAQAWFAGLREAAGRVKNILAKAPSRPE----TVDAQLFKIDAEKGLWNAVETLREPIAQ 623 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + R++ + + L + + FFDQV+V DD VRDNRL+LL + + +V ++ + Sbjct: 624 DVAECRWNDLMERLAGLAPAVAAFFDQVMVMDDDAAVRDNRLALLLHCDRLFSLVGDLSR 683 >gi|300692465|ref|YP_003753460.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum PSI07] gi|299079525|emb|CBJ52203.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum PSI07] Length = 719 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 215/701 (30%), Positives = 351/701 (50%), Gaps = 70/701 (9%) Query: 31 GLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKA---- 81 GLL EEG + + TP RL + G+ +P++ + E++ P A GK A Sbjct: 59 GLL-EEGA---QVEGFATPRRLAASIAGVRRAAPDRELREKVLPVNIAFDADGKPAAPLT 114 Query: 82 --IDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWP 138 + +S G+ I+ +++ P K + ++ D L+ + I +P P Sbjct: 115 KKLAALAKSIGVDAIAPESLERAPDGKAESLFYRYTARGAVLADGLQAALSQTIAGLPIP 174 Query: 139 KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 K M + + + ++RP + +L +++I + + GN+T GHRF + Sbjct: 175 KVMTYQRPNG--DSVQFVRPAHRLTALL-----DDEVIPASVLGLQSGNVTLGHRFLSAG 227 Query: 199 PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV 257 I + Y L+ + V+ R+ AI + + A A +V + LL+E+ LV Sbjct: 228 EIVIPHATAYAGTLQSQGKVIASYAERKEAIRAELQKAAGAD--TVVMPEALLDEVNSLV 285 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAA 317 EW V+ FD+ +L +P+E + LT++TNQK F +G L N F++VSNI GA Sbjct: 286 EWPVVYPCHFDEPFLAVPQECLILTMQTNQKYFALTDAQGHLRNRFLIVSNIATGTPGA- 344 Query: 318 IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 I++GN RVV RL DA F++ D+ KPL R+ +L V Sbjct: 345 IIEGNERVVRPRLADARFFFEHDKK--------------------KPLADRVPQLSR--V 382 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 V+H KIGTQ ERVSR++ + ++A+ + ADVA RA +L+KADL T++V EFPELQG + Sbjct: 383 VYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRAALLAKADLLTDMVGEFPELQGTM 442 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA E A EH +PR + +P+ V+LADKL+TL+ W I P+ Sbjct: 443 GTYYARHDGEPEDVALACSEHYQPRFAGDALPSTATGTVVALADKLETLVGIWGIGLAPT 502 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLIL-FFHDRL 542 G KDP+ALRR LGI+R+++E + + +++ +E D I F +DRL Sbjct: 503 GEKDPFALRRHALGILRMLIEKPLALGVAEVLEVAAASFEGIAAVKPDLAAITDFLYDRL 562 Query: 543 KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 + YL D+ + +EA++ L IV ++ + F + + E + KRI IL Sbjct: 563 RGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAALPQAEALAAANKRITNIL-- 620 Query: 603 EEKKNREISL-EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 K +I++ + PQ L +AE+ L+ ++ H+ ++ + L + E + Sbjct: 621 ---KKTDIAIGAVQPQLLREDAERALHQAVATSEPHVHDAFARGDFTTALKTLAGLREAV 677 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 678 DSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 718 >gi|222054674|ref|YP_002537036.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. FRC-32] gi|254781851|sp|B9M5V4|SYGB_GEOSF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|221563963|gb|ACM19935.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. FRC-32] Length = 687 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 211/726 (29%), Positives = 352/726 (48%), Gaps = 69/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LEI +EEIPA KA D+ ++ L+ + + ++ TP RL L +K +S Sbjct: 4 ELFLEIGTEEIPAGFLPKAMADMEGLIRKELESARIGFGEVKTMATPRRLALVVKNVSAQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + +GP G KA +GF R G+ + I + KG+ Y+AV +K Sbjct: 64 QTDAEITTMGPAKKVAFNDDGTTTKAGEGFARGQGVDASALSIIATE--KGE-YVAVTKK 120 Query: 116 PKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L I+P I +P+ KSMRW + RP+ I+ + Sbjct: 121 EIGVATAGLLAEILPRLINNIPFKKSMRWGDQE-----VRFARPMHWIVALF-----DGT 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + G+++ GHRF A V+ HY+ + E V+ DP R+ I + R Sbjct: 171 VIPFAFGNVQSGSMSRGHRFMANTSFPVRDFGHYLEECERHFVIPDPAKRKEIISREIER 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A A G ++ D+ LLE++ LVE+ G+F ++L +P+E++ +++ +Q+ F Sbjct: 231 VAKAAGGNVLPDEGLLEQVTYLVEYPSAVHGTFSAEFLAVPKEVLITSMREHQRYFSLVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI ++N D + +V+GN V+ ARL DA F++ D+ Sbjct: 291 DKGKLLPGFITINNTLTEDP-SVVVKGNEMVLRARLSDARFFFEEDKK------------ 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 PL++R+ L V++ AK+GT E++ R R L + +A+ + + A V + Sbjct: 338 --------VPLEKRVEALK--SVLYQAKLGTSYEKMERFRTLAEGLAEQLQPPLKAKVFQ 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL T +V EFPE+QG +G+EYA+LQ + AI EH P +P + Sbjct: 388 AATLCKADLVTGMVGEFPEVQGIMGREYALLQGVDAEVARAIAEHYLPNQAGGELPASDT 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 VS+ADK+DT+ +++ PSGS DPYALRRA LGII IIL ++PL + Sbjct: 448 GAFVSIADKVDTICGCFSVGLIPSGSADPYALRRAALGIINIILAKGYNLPLIPLVTKAI 507 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ FF R L DR D++EA++ DNL+ I+ Sbjct: 508 GQLEGRLTRKKEEVLADVLDFFKGRFINLLTDR-FPADVVEAVVAVSFDNLVEATAKIEA 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L +F E ++ KR+ I+ ++++ + + AE L+ + Sbjct: 567 LAQFKKRDDFEPLAVAFKRVCNIV------KEQVTVPVDDKLFQDAAEGTLFQSFKSASS 620 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++E + + Y + S+ ++ FFD+V+V +D VR+NRL+LLQ IK++ + Sbjct: 621 MVEEKVVQREYLAALTQIASLKGAVDDFFDKVMVMAEDEGVRNNRLALLQEIKSLFRDIA 680 Query: 697 NVQKIV 702 + K+ Sbjct: 681 DFGKLT 686 >gi|197117039|ref|YP_002137466.1| glycyl-tRNA synthetase subunit beta [Geobacter bemidjiensis Bem] gi|238690872|sp|B5ED84|SYGB_GEOBB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197086399|gb|ACH37670.1| glycyl-tRNA synthetase, beta subunit [Geobacter bemidjiensis Bem] Length = 687 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 212/717 (29%), Positives = 341/717 (47%), Gaps = 71/717 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LEI EEIPA KA D+ +++ + Y + TP RL L +KG++ Sbjct: 4 DLFLEIGCEEIPAGFVPKAMADMELLIKKEFDSARIEYGEIVTLGTPRRLVLAVKGVAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLR 114 P+ +GP G KA GF R G+ Q+K +KG+ AV Sbjct: 64 QPDAELTAMGPAKSHAYDADGNPTKAAQGFARGQGIDV---SQLKLVTTEKGEYLAAVKS 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L ++P I +P+ KSMRW+ + RP+ I+ + K Sbjct: 121 EIGRATAELLPELLPRLIGNIPFKKSMRWADFD-----VRFARPIHWIVALF-----DGK 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I G+ + GHRF A V+ L HY+ + E V+ DP R+ I + R Sbjct: 171 VVPFSFGNIDSGSASRGHRFMANTSFPVRDLAHYLEECERHFVIPDPNKRKEIIRAEIER 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ D+ LLE++ LVE+ G+F +L +P E++ +++ +Q+ F Sbjct: 231 VAKQAKGNVLPDEALLEQVSYLVEYPSAVHGTFSPDFLVVPREVLITSMREHQRYFSLVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI ++N D +V+GN RV+ ARL DA F+ D Sbjct: 291 DEGKLLPGFITINNTITEDP-QVVVKGNERVLRARLSDARFFFDEDH------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VD 412 K L+ AR++ L VV+ AK+GT E++ R R LGK++AQ ++ V V+ Sbjct: 337 -KVRLE---------ARVESLKSVVYQAKLGTSYEKMERFRELGKRLAQRLNPAVTKEVE 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL + +V EFPE+QG +G+EYA+ E + +AI EH P +P + Sbjct: 387 RAATLCKADLVSGMVGEFPEVQGIMGREYALHDGEEKAVANAIAEHYLPTQAGGELPASD 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I VSLADK+DT+ +++ P+GS DPYALRR+ LGII IIL+ PLS F++ Sbjct: 447 IGAFVSLADKMDTICGCFSVGLIPTGSADPYALRRSALGIINIILDKGYREPLSDFVKAS 506 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 ++++ FF R + DR D +EA++ D+L+ I+ Sbjct: 507 LDLLSAKATRPLAEVQKDVLDFFRGRFVNLMADR-FPSDAVEAVVSVSFDDLVEAAAKIE 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L F + ++ KR+ I+ + +S + AE L+ ++ Sbjct: 566 ALAGFRNRDDFGPLAVAFKRVCNIV------KDGVDTPVSTELFQDAAEGELHQALTQVS 619 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + ++ Y + ++ +++FF++V+V +D VR NRL+LL I + Sbjct: 620 GKVAAALKKADYLAALTEIATLKPAVDLFFEKVMVMAEDERVRQNRLALLTGIARLF 676 >gi|74318365|ref|YP_316105.1| glycyl-tRNA synthetase subunit beta [Thiobacillus denitrificans ATCC 25259] gi|123731722|sp|Q3SGF0|SYGB_THIDA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|74057860|gb|AAZ98300.1| glycyl-tRNA synthetase, beta subunit [Thiobacillus denitrificans ATCC 25259] Length = 701 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 214/731 (29%), Positives = 375/731 (51%), Gaps = 66/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K E + L L +G+++ + + +P RL +++ + Sbjct: 5 NLLVELFVEELPPKALKKLGEAFAAALTESLVAQGLVHAQAAVTHFASPRRLGAHIENVL 64 Query: 61 PHSPEK-IEERLGP-RVG--AGKKAIDGFLR-----STGLQTISDCQIKKDPKKGDVYLA 111 S +K + +L P VG A A L+ ++ + + D K +++ Sbjct: 65 ERSADKPVSTKLMPVSVGLDADGNATPALLKRLAALGADASAVATLRRESDGKAEALFMD 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + K L + K + ++ K+P PK M + S +++RP+ ++ + + Sbjct: 125 SVAKGISLGLGLAKALWE-SLDKLPIPKVMSYQLADG-WSTVNFVRPVHGLVALHGTDP- 181 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 +D+ + + G T+GHRF A PI ++ D Y + LE E V+ + RR I+ Sbjct: 182 ----VDVRMFGLTAGRKTHGHRFEAAADPIVLKDADSYAQQLESEGAVIANFAERRAEIV 237 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A+ +GL VED+ LL+E+ LVE V +G F++ +L +P+E + LT+K NQK Sbjct: 238 RQLEAAAAPLGLVPVEDEALLDEVTALVERPNVLLGQFEQAFLEVPQECLILTMKANQKY 297 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L N F++VSNI +D +A+V GN RVV RL DA F+ +D+ Sbjct: 298 FPLLDAAGKLTNKFLIVSNISPADA-SAVVGGNERVVRPRLADAKFFFDQDRK------- 349 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-V 408 K LD R+ L + VV+H K+GTQGERV+R++ + + I + + + + Sbjct: 350 -------------KTLDARV--LGLAKVVYHNKLGTQGERVTRVQAVARAIGEKLGGEAL 394 Query: 409 AL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENIS--CCDAIEEHLKPRGPL 465 AL D+A +L+KADL T++V EFPELQG +G+ YA Q++ ++ AIE+H +PR Sbjct: 395 ALKADQAALLAKADLLTDMVGEFPELQGVMGRYYA--QHDGVADDVAFAIEDHYRPRFAG 452 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +++P N + + V+LADKL+TL+ + I EKP+G KDP+ALRR LG++R+++E + I L Sbjct: 453 DDLPRNPVGVCVALADKLETLVGLFGIGEKPTGDKDPFALRRHALGVVRMLIEKHLPIGL 512 Query: 526 SQFIE------DQNLI--------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ + Q L+ LF +RL + ++ + ++A+L + + Sbjct: 513 NELVSIAFSAFQQGLLGQAHTDVYLFMFERLSGAMREQGYSANEVDAVLSLNPIRIDLVP 572 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL +K E+ P + AE+ L+A + Sbjct: 573 QQLEAVRAFAALPEAAALAAANKRVGNIL---KKAEGEVGASADPGRFVEAAERALFAAL 629 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + Y L ++ P++ FFDQV+VN DD +R NRL+LL + Sbjct: 630 DEVAPRAAAAFGSGDYTASLQALAALKAPVDAFFDQVMVNADDPALRANRLALLNQLHRT 689 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 690 MNRVADISRLA 700 >gi|325206837|gb|ADZ02290.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M04-240196] Length = 687 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 211/660 (31%), Positives = 343/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSGNQTLGHRFLSDGEITIENADSYAEQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+++ LVE+ V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDKVTALVEYPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q +D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|311277514|ref|YP_003939745.1| glycyl-tRNA synthetase, beta subunit [Enterobacter cloacae SCF1] gi|308746709|gb|ADO46461.1| glycyl-tRNA synthetase, beta subunit [Enterobacter cloacae SCF1] Length = 689 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 213/718 (29%), Positives = 332/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDSAGLAHGGVEWFAAPRRLALKVAALAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAVAQAFDASGHPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW S ++RP+ ++ +L +E +I Sbjct: 124 GESAQALLPNMVATALAKLPIPKLMRWGA-----SDVHFVRPVHTVTMLLGSE-----VI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIASDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKATIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLKVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI + D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIVSKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RLD V+F ++GT ++ RI L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLDT--VLFQQQLGTLRDKTDRIEALSGWIARQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGIMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSNLVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLSLDLQSLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K + F Sbjct: 511 YGEKLTNASVVDDVIDFMLGRFRAWYQDEGYAVDTIQAVLARRPTRPADFDARMKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + ++ ++ L E L I ++ Sbjct: 571 RTLDAASALAAANKRVSNILA---KSDEVLNERVNAATLKDPEEVALALQIVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + EP++ FF++V+V VDD+E+R NRLS+L+ ++ + L V ++ Sbjct: 628 YFAQGRYQEALVELAELREPVDAFFEKVMVMVDDKELRINRLSMLEKLRELFLQVADI 685 >gi|289677558|ref|ZP_06498448.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 684 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 211/716 (29%), Positives = 331/716 (46%), Gaps = 60/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K +L KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKP- 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 123 --TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELAA 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F G Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDGTG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPE+QG G YA E A+ E PRG +PT V Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQFI 529 ++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L +QF Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKFAVTQFG 507 Query: 530 ED-------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 508 AKIKPAGLAEQVLEFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRK 567 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ +L+ K I+ + P+Y E LY+ I Q Sbjct: 568 LPQAAALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHATQPMA 624 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 625 AERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 680 >gi|322412455|gb|EFY03363.1| glycyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 679 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 210/702 (29%), Positives = 354/702 (50%), Gaps = 86/702 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAARVIGLANQQTDLTEDFKGP 74 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + + ++VL Sbjct: 75 AKKIALDAAGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + ++ +P SM W+ ++F +IRP+ + +L ++ +DL+ +I Sbjct: 132 GVAEV-LAEMTFPVSMHWAK-----NSFEYIRPVHTFTVLL-----DDEALDLEFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I++ + +A G+++ Sbjct: 181 GRVSRGHRFLGKE-TTITSADSYEDDLRSQFVIADAKERQEMIVDQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L FI Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFIS 299 Query: 306 V--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSK 363 V N QA D +++GN +V+ ARLED FW+ DQ L+ + L Sbjct: 300 VRNGNDQAIDN---VIKGNEKVLVARLEDGEFFWREDQK-------LQVADL-------- 341 Query: 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKA 420 +A+L +V FH KIG+ E + R RV+ +A+ L + A VDRA + K Sbjct: 342 -----VAKL--ANVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKF 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T +V EF ELQG +G++YA+L EN + AI EH P +P K+ ++LA Sbjct: 395 DLLTGMVGEFDELQGIMGEKYALLAGENPAVATAIREHYLPDAAEGVLPETKVGAVLALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 455 DKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWRIPMDKLVDSLYDLSFDSL 514 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 N I D++ +DIR ++E+ + + +++ ++ Sbjct: 515 NYANKVDVMNFIRARVDKMMGKAIPKDIREAVLES-------STFVVPEILAAAEVLVNA 567 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + + + + + + EK + S+ + P + E+ L+A I S++ Sbjct: 568 SHTENYKPAVESLSRAFNLAEKA--DASVRVDPSLFENDHEQALFAAIQSL------SLE 619 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +Q+ + + ++ I FFD +V DD+ +++NRL+LL Sbjct: 620 GSAENQV-EQVFALSPVINDFFDNTMVMADDQAIKNNRLALL 660 >gi|237748760|ref|ZP_04579240.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes OXCC13] gi|229380122|gb|EEO30213.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes OXCC13] Length = 694 Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 205/728 (28%), Positives = 357/728 (49%), Gaps = 68/728 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSP 61 L+EI +EE+P + K A+ + + LK+E + + Y TP RL + + + Sbjct: 5 LLVEILTEELPPKALMKLADSFASTIESSLKQEDFLNDTSKTTIYATPRRLAVTITDVRD 64 Query: 62 HSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPK-KGDVYLAVL 113 SP+K + +++ P G + L + + I +++K P K + + Sbjct: 65 VSPDKTVRQKVLPVNVALDADGNPTAPLKKKLAALNIPDIDISKLEKAPDGKNESFFYTY 124 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + L+ V A +P PK M + F +RP+ + + E Sbjct: 125 TAAGLPLASALQKAVEKAAHDLPVPKMMTYQRPDGETVEF--VRPVHEFIAM-----HGE 177 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRN---AIL 229 ++ + L + G IT+GHRF + I + + D+Y LE V+ + R+ A+L Sbjct: 178 NVLPITLLGLSAGRITHGHRFLSDGDIGILAADYYAVTLETRGKVIPGFQSRKERIRAML 237 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 N+ A G +++ + LL+E+ LVEW V+ +F+ +L +P+E + LT++TNQK Sbjct: 238 NE-----KAKGDKVLMPESLLDEVTALVEWPIVYECNFEDTFLEVPQECLILTMQTNQKY 292 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L + F++VSN++ ++ I+ GN RVV RL DA F+++D+ Sbjct: 293 FALTDASGRLRSRFLIVSNME-TNTPQRIISGNERVVRPRLSDARFFFEQDKK------- 344 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K L+ R+ L +VV+H K+GT +R++R+R+L IA+ + D Sbjct: 345 -------------KKLEDRLPGL--ANVVYHNKLGTLAQRMARVRLLSVFIAEKLGYDKQ 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L DR L+KADL TE+V EFPELQG +G YA E A +EH PR + +P Sbjct: 390 LADRGAQLAKADLLTEMVGEFPELQGIMGTYYARHDGEPEEVALAAQEHYMPRFAGDVLP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T ++LADK++TL+ W I +P+G +DP+ALRR LG +RI++E K+ + L + + Sbjct: 450 TTATGTVIALADKMETLVGIWGIGLQPTGDRDPFALRRHALGFLRILIEKKLPLSLREVL 509 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + + +I FF DRL+ L DR D IEA+L D +++ + Sbjct: 510 AETVSILSTNATMKDPTEGVIAFFMDRLRGLLRDRGYTPDEIEAVLSQNPDRFDNLIERL 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F + + KRI IL KK+ + ++ P L+ ++EK+L+ ++ Sbjct: 570 DAVRAFAEMPEAASLAAANKRITNIL----KKSDVNTGQVQPDVLVEDSEKKLFTDMTAV 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y + + + ++ FF V+V DD+++R+NR++LL+ + ++ Sbjct: 626 KPQADQKFAAGDYTGTLKTMAQLHDDVDAFFTNVMVMADDQKLRNNRIALLKQLHTMMNQ 685 Query: 695 VINVQKIV 702 V ++ K+ Sbjct: 686 VADISKLA 693 >gi|257419861|ref|ZP_05596855.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T11] gi|257161689|gb|EEU91649.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T11] Length = 694 Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 217/735 (29%), Positives = 366/735 (49%), Gaps = 89/735 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L DK+LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDKELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLS 683 K LY ++D + Y + +L P I+ +F++ +V V+D++V+ NRL Sbjct: 619 KELYQAVNDLSEAFATRTIAENYEALVNL-----RPLIDAYFNETMVMVEDKKVKQNRLK 673 Query: 684 LLQYIKNIILIVINV 698 L I + L + ++ Sbjct: 674 QLMQIAKMALSIASL 688 >gi|256847129|ref|ZP_05552575.1| glycyl-tRNA synthetase beta subunit [Lactobacillus coleohominis 101-4-CHN] gi|256715793|gb|EEU30768.1| glycyl-tRNA synthetase beta subunit [Lactobacillus coleohominis 101-4-CHN] Length = 690 Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 207/730 (28%), Positives = 359/730 (49%), Gaps = 77/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + L + LK++ + + +++Y TP RL L + GLS Sbjct: 5 YLLEVGVEEMPAHVVTPSIHQLHERVAKYLKDQRIDFTEIQEYATPRRLALLIHGLSDQQ 64 Query: 64 PEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP + G KA GF R G T+ + + K+ KG Y+ V + Sbjct: 65 PDIDESVKGPAKKIAQDQDGNWTKAAIGFTRGQGA-TVDEIEFKE--VKGTEYVFVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +VLK + P I + +P M+W +IRP++ ++ +L +++ Sbjct: 122 AGKPVAEVLKGL-PDVITSMNFPTLMKWG-----YHDLQFIRPIRWLVSLL-----NDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ G T GHRF HP+ + + D Y + L + V+ D R++ I + Sbjct: 171 VPFSILDVTAGRQTQGHRFLG-HPVDIATADDYEQTLHDDFVIADQGKRKDLIKKQITEI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D DLLEE+ LVEW F GSFD+KYL LPE ++ ++K NQ+ F R + Sbjct: 230 IDQHQWQIDWDADLLEEVNNLVEWPTAFAGSFDEKYLALPEPVLITSMKDNQRFFCLRDQ 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + +++GN RV+ RLEDA F+ DQ Sbjct: 290 DGKLLPHFISVRN-GNREHLENVIKGNERVLVPRLEDAQFFYDEDQ-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 +DQ + RL V FH +I + ++++R ++ K + + L D + A + Sbjct: 335 ------KLTIDQYVERLKK--VSFHDQISSMADKMARTAIIAKLLGEKLNLTDQEQADLQ 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T++V EF ELQG +G+ YA L E A+ EH P +P K Sbjct: 387 RAAQIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKADVAAAVREHYMPISAEGALPQTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------- 525 I +++ADKLD++ +F+ PSGS DPYALRR GI+RI+ + + +PL Sbjct: 447 IGAILAIADKLDSIFSFFGAGMIPSGSNDPYALRRQAYGIVRIVADRQWHLPLLAMQKEI 506 Query: 526 SQFIEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 ++ I+ ++ L FF DRLK + ++RHD+++A+ + +L+ I++ Sbjct: 507 AEQIQQSDMQLKFDYLKNADQVNNFFMDRLKQFFAGENLRHDIVDAVTKTNQADLVNIIE 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 +N+ S + + + + R+ ++ +K + S E++P +E +L+ Sbjct: 567 AAAAINDQKSDDEFKDDIEALTRVIRLA----QKGQPTSSEVNPGLFQNPSEAKLHEATK 622 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + E + HQ+ L I E +FD+ ++ D +V++NRL+ LQ I + Sbjct: 623 QLQSKFAELPLAEALHQLRSLAPIITE----YFDENMIMDKDPQVQNNRLAQLQQIARMT 678 Query: 693 LIVINVQKIV 702 + ++ +++ Sbjct: 679 QVFGDLNQLI 688 >gi|191638499|ref|YP_001987665.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus casei BL23] gi|238693042|sp|B3WEK6|SYGB_LACCB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|190712801|emb|CAQ66807.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus casei BL23] gi|327382534|gb|AEA54010.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus casei LC2W] gi|327385731|gb|AEA57205.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus casei BD-II] Length = 689 Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 209/712 (29%), Positives = 338/712 (47%), Gaps = 84/712 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 5 YLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGAIDQYATPRRLALLIHDLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E+ GP G KA GF R G+ T D K VYL K Sbjct: 65 ADVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGM-TPDDIVFKTIKGVDYVYLHKAIKG 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K +L ++ V I+ + +P M+W F +IRP+ ++ +L + I+ Sbjct: 124 KTAAA-ILPGMLDV-IKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDAIV 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H++A Sbjct: 172 PMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQIA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 231 ADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARDAS 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 291 GKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQKR------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDR 413 ++ +D+ A V FH KI + ++++R RV+ +A L D A +DR Sbjct: 337 ---SIADDVDRLKA------VSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADLDR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + + Sbjct: 388 AASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPESLV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE--------------- 518 +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I + Sbjct: 448 GTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTTIA 507 Query: 519 ---------NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 N +D Q Q+L F DR K L + IRHD+++A+ + +L Sbjct: 508 DALKAAGKTNNLDFAAHQ----QDLNAFMIDRAKQVLQGQKIRHDIVDAVTVRADADLAG 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+D K L+ + + + R+ +I K +++ +++ +E +LY Sbjct: 564 ILDAAKILSAHADDTDFKPVMEALGRVLRI-----TKKQQVKVDVDTAKFENPSEGQLY- 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 D + D + L ++ +PI +FD +V DD+ +R NR Sbjct: 618 ---DATVATAKKFDDEPTEADYQALKALADPINAYFDATMVMADDQAIRQNR 666 >gi|239631413|ref|ZP_04674444.1| glycyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525878|gb|EEQ64879.1| glycyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 689 Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 209/712 (29%), Positives = 338/712 (47%), Gaps = 84/712 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 5 YLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGAIDQYATPRRLALLIHDLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E+ GP G KA GF R G+ T D K VYL K Sbjct: 65 ADVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGM-TPDDIVFKTIKGVDYVYLHKAIKG 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K +L ++ V I+ + +P M+W F +IRP+ ++ +L + I+ Sbjct: 124 KTAAA-ILPGMLDV-IKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDAIV 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H++A Sbjct: 172 PMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQIA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 231 ADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARDAS 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 291 GKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQKR------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDR 413 ++ +D+ A V FH KI + ++++R RV+ +A L D A +DR Sbjct: 337 ---SIADDVDRLKA------VSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADLDR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + + Sbjct: 388 AASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPESLV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE--------------- 518 +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I + Sbjct: 448 GTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTTIA 507 Query: 519 ---------NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 N +D Q Q+L F DR K L + IRHD+++A+ + +L Sbjct: 508 DALKAAGKTNNLDFTAHQ----QDLNAFMIDRAKQVLQGQKIRHDIVDAVTVRADADLAG 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+D K L+ + + + R+ +I K +++ +++ +E +LY Sbjct: 564 ILDAAKILSAHADDTDFKPVMEALGRVLRI-----TKKQQVKVDVDTAKFENPSEGQLY- 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 D + D + L ++ +PI +FD +V DD+ +R NR Sbjct: 618 ---DATVATAKKFDDEPTEADYQALKALADPINAYFDATMVMADDQAIRQNR 666 >gi|328957484|ref|YP_004374870.1| glycine--tRNA ligase subunit beta [Carnobacterium sp. 17-4] gi|328673808|gb|AEB29854.1| glycine--tRNA ligase subunit beta [Carnobacterium sp. 17-4] Length = 694 Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 224/739 (30%), Positives = 362/739 (48%), Gaps = 89/739 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI EE+PA + +++ L+ + LKE + + + + TP RL + +K ++ Sbjct: 4 NLLLEIGLEEVPAHIVTPSSKQLTQKVAAFLKENRLAHGEVIPFSTPRRLAVIVKDIA-E 62 Query: 63 SPEKIEERL-GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 E IEE + GP G KA GF R G T D K VY+ Sbjct: 63 KQEDIEESVKGPAKKIAQDAEGNWSKAAIGFARGQG-ATTEDIYFKSIKDVEYVYVDKFI 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K ++D+L + V I + +P SM W + HS F +IRP + +L E+ Sbjct: 122 SGKT-VKDILVGLDEV-ITSMTFPVSMHWGS-HS----FKYIRPFHWLTAML-----DEE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ N + GHRF +LD Y + LE V+ D R+ I++ Sbjct: 170 VIPFEILDVQTANTSRGHRFLGQDVTFASALD-YEKTLENVYVIADSAKRKQMIVSQIEE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L A + D+ LLEE+ L+E+ F GSFDKKYL LPEE++ ++K +Q+ F + Sbjct: 229 LMEANQWSVTFDEKLLEEVNNLIEYPTAFYGSFDKKYLDLPEEVLITSMKDHQRYFGVKD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG++ FI V N A + + +GN +V+ ARL+D F++ DQ Sbjct: 289 GEGIILPYFISVRNGNA-EHIETVAKGNEKVLTARLDDGQFFFEEDQK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---- 410 L ++ +D+ + V FH KIG+ E+++R++ IAQLI V L Sbjct: 336 ----LTIASCVDR------LKQVTFHEKIGSIYEKMNRVQA----IAQLIGKQVGLTTTE 381 Query: 411 ---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 ++RA + K DL T +V EFPELQG +G++YA++Q EN + AI EH P Sbjct: 382 LTDLNRASEIYKFDLVTNMVGEFPELQGIMGEKYALMQGENPTVAAAIREHYMPISSEGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-- 525 +P + + +++ADKL+++++F+A+ P+GS DPYALRR T GI+RII P+ Sbjct: 442 LPQSSVGAVLAIADKLESVLSFFAVGMIPTGSNDPYALRRQTYGIVRIIESKNWVFPMDS 501 Query: 526 -------------SQFIED-----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 S IE +I F R++ L IRHD+I+A L +N+ Sbjct: 502 LKEGILAAPVINQSALIEGYQSSTAQVIDFIKARVRQLLMAESIRHDVIDAALNSRQENV 561 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE---ISPQYLLLEAE 624 L +++ + +N S A F + + + ++L + +K ++ E + P +E Sbjct: 562 LKLIEASRIINGHLSDA---IFKSTIEALTRVLNLADKGKELLAQEQASVDPALFETISE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLS 683 K L+ + T + + Y L +P IE FF++ +V D+ VR+NRL+ Sbjct: 619 KNLHDSFAKIATKSSQENSSQSYEAFEQL-----QPLIEAFFNENMVMADNEAVRNNRLA 673 Query: 684 LLQYIKNIILIVINVQKIV 702 LL I + +L +V K+V Sbjct: 674 LLMQISDFVLSFASVDKLV 692 >gi|199598418|ref|ZP_03211837.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus HN001] gi|199590737|gb|EDY98824.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus HN001] Length = 689 Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 205/730 (28%), Positives = 345/730 (47%), Gaps = 76/730 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L+EI E++PA + + + LK + + + +Y TP RL L + L+ Sbjct: 4 DYLIEIGLEDMPAHVVTPSINQFHDKTVAFLKANHLEHGQIDRYATPRRLALLVHDLAAK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + GP G KA GF R G+ T D K VYL K Sbjct: 64 QADVETDVKGPAKKIAQDADGNWTKAAIGFSRGQGM-TPDDIVFKTIKGVDYVYLHKAIK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K E +L + V I+ + +P M+W F +IRP+ ++ +L + + Sbjct: 123 GKDAAE-ILPGMHDV-IKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDTV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + L ++ G +T GHRF P+ + + D Y+ L++ V+++P R+ I ++ Sbjct: 171 VPMKLLDVEAGRVTQGHRFLG-KPVTLPNADAYVAALKDQFVIVEPAARKQLIREQIEQI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ ++ D DLLEE+ LVEW F G+FD KYL +PE ++ ++K NQ+ F R + Sbjct: 230 ATDHQWQIELDSDLLEEVNNLVEWPTAFAGTFDPKYLAIPEAVLITSMKDNQRYFYARDQ 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G + N FI V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 290 AGKMVNAFIGVRNGN-HDHLNNVIAGNEKVLTARLEDAAFFYAEDQK------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 + + + + RL V FH KI + ++++R +V+ +A L + A +D Sbjct: 336 -------RSIAEDVERLKA--VSFHDKISSMYDKMARTKVIAALLADQFGLTADEKADLD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 387 RAASIYKFDLVTSMVGEFPELQGIMGEHYARLAGEKPAVAQAIAEHYEPIAADGALPQSL 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---- 528 + +++ADKLD+L++F+A++ PSGS DPYALRR GI+R+I E+ L+ Sbjct: 447 VGTVLAIADKLDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAEHDWPFALASLQPTI 506 Query: 529 ----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 Q L F DR K L + IRHD+++A+ + ++ I+ Sbjct: 507 AKALAEADQTNGLDFAAHQQELNDFMIDRAKQLLQGQKIRHDIVDAVTVRSDADIAGILA 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K L + + + + + + R+ +I + ++ + P E +L+ ++ Sbjct: 567 AAKLLTQHAADSDFKPVMEALGRVLRITG-----KQTVTTAVDPTKFENPTEGQLHDAVT 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 Y L ++ +PI+ +FD +V DD+ VR+NRL+ LQ + +I Sbjct: 622 TTAKTFAAEPTEADYQA----LKALAKPIDAYFDATMVMADDKTVRENRLATLQQLAKLI 677 Query: 693 LIVINVQKIV 702 +V +++ Sbjct: 678 RQFGDVSQVI 687 >gi|290511859|ref|ZP_06551227.1| glycyl-tRNA synthetase, beta subunit [Klebsiella sp. 1_1_55] gi|289775649|gb|EFD83649.1| glycyl-tRNA synthetase, beta subunit [Klebsiella sp. 1_1_55] Length = 689 Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 207/718 (28%), Positives = 335/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVANLAAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L +K+I Sbjct: 124 GESTEALLPNMIASSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + IP + GHRF + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L + Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLMTLTAEAIRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F +R + + D D I ++L + +K + F Sbjct: 511 YGDKLTNPNTLDDVETFMLNRFRAWYQDMGFSIDTILSVLELRPTMPVDFDARVKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ IL+ K+ ++ + P L AE+ L ++ I+ Sbjct: 571 RSQPDAASLAAANKRVSNILS---KRVDVLNDSVHPALLTERAEQELAFKLAVVRDRIKP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + +Y L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V ++ Sbjct: 628 LCQNLQYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQVADI 685 >gi|116494987|ref|YP_806721.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus casei ATCC 334] gi|227535007|ref|ZP_03965056.1| glycine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|122263595|sp|Q038U3|SYGB_LACC3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116105137|gb|ABJ70279.1| glycyl-tRNA synthetase beta chain [Lactobacillus casei ATCC 334] gi|227187322|gb|EEI67389.1| glycine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 689 Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 209/712 (29%), Positives = 338/712 (47%), Gaps = 84/712 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 5 YLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGAIDQYATPRRLALLIHDLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E+ GP G KA GF R G+ T D K VYL K Sbjct: 65 EDVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGM-TPDDIVFKTIKGVDYVYLHKAIKG 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K +L ++ V I+ + +P M+W F +IRP+ ++ +L + I+ Sbjct: 124 KTAAA-ILPGMLDV-IKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDAIV 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H++A Sbjct: 172 PMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQIA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 231 ADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARDAS 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 291 GKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQKR------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDR 413 ++ +D+ A V FH KI + ++++R RV+ +A L D A +DR Sbjct: 337 ---SIADDVDRLKA------VSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADLDR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + + Sbjct: 388 AASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPESLV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE--------------- 518 +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I + Sbjct: 448 GTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTTIA 507 Query: 519 ---------NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 N +D Q Q+L F DR K L + IRHD+++A+ + +L Sbjct: 508 DALKAAGKTNNLDFAAHQ----QDLNAFMIDRAKQVLQGQKIRHDIVDAVTVRADADLAG 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+D K L+ + + + R+ +I K +++ +++ +E +LY Sbjct: 564 ILDAAKILSAHADDTDFKPVMEALGRVLRI-----TKKQQVKVDVDTAKFENPSEGQLY- 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 D + D + L ++ +PI +FD +V DD+ +R NR Sbjct: 618 ---DATVATAKKFDDEPTEADYQALKALADPINAYFDATMVMADDQAIRQNR 666 >gi|90581119|ref|ZP_01236918.1| glycyl-tRNA synthetase beta subunit [Vibrio angustum S14] gi|90437640|gb|EAS62832.1| glycyl-tRNA synthetase beta subunit [Vibrio angustum S14] Length = 689 Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 212/699 (30%), Positives = 330/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + + ++ Y P RL L + GL+ + Sbjct: 5 NFLIELGTEELPPTALRTLAEAFATNFEAELKAADLPHDGIKWYAAPRRLALKVTGLAEN 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K+ E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 65 QPDKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVDQAERMVTD--KGEWLLFKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L + A+ K+P P+ MRW + +IRP+K++ +L +++ Sbjct: 123 KGQPAQTLLPELAAAALAKLPIPRPMRWGDKET-----QFIRPVKTLTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ + + GHRF + + D Y LEE V+ D E R+ IL DA + Sbjct: 173 IEGTILGVASARTIRGHRFMGEAEFTIDNADQYPAILEERGKVMADYEARKAIILADAKK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A AVG + DL+EE+ LVEW V SF++++L +P E + T+K +QK F Sbjct: 233 AAEAVGGIADLEDDLVEEVTSLVEWPVVLTASFEEEFLKVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI VSNI ++D + I+ GN +VV RL DA F Sbjct: 293 AEGKLVPKFIFVSNIISNDP-SQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL L R+ +L+ +F ++GT ++ RI L IA I ADV RA Sbjct: 334 --FNTDLKSKLIDRLPQLET--AIFQKQLGTIKDKTDRITELAGYIADKIGADVDNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYMPRFAGDQLPSTPVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN D+ L + Sbjct: 450 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYDLDLVDLVAKAHS 508 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 D ++I F R + + D D+I+A+L +K ++ Sbjct: 509 LFGDKLTNNNVDSDVIEFMLGRFRAWYQDAGFSIDVIQAVLAMHPTQPADFDKRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E+ + L+ AEK L +S ++ Sbjct: 569 FRELDAAESLAAANKRVGNILA---KFDGELPTTVDNSLLVEAAEKELAEKVSAVVAALE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 Y L S+ EP++ FFD V+V DD +++ Sbjct: 626 PVFATGDYQTALTELASLREPVDAFFDNVMVMADDEKLK 664 >gi|325569855|ref|ZP_08145849.1| glycyl-tRNA synthetase beta subunit [Enterococcus casseliflavus ATCC 12755] gi|325156978|gb|EGC69146.1| glycyl-tRNA synthetase beta subunit [Enterococcus casseliflavus ATCC 12755] Length = 690 Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 211/725 (29%), Positives = 350/725 (48%), Gaps = 87/725 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L + Y + Y TP RL +Y+ GL + E+ GP Sbjct: 15 PAHVVTPSMKQLQEKTAAFLDAHALPYTAIEAYSTPRRLAVYVTGLPEKQADTQEDVKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T D ++ VY+ + + +E VLK Sbjct: 75 AKKIALDEAGNWSKAAQGFVRGQGL-TTDDITFRELKGVEYVYVTKHTQGQPTVE-VLKG 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V I + +P +M W+ F +IRP+ I+ + E++I + +I G Sbjct: 133 LQEV-ITSLTFPVTMHWADYD-----FEYIRPIHWIVALF-----GEQVIPFQILDIVTG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 + GHRF + D Y+ ++ V+ DP R+ I + + +A + D Sbjct: 182 RESKGHRFLG-EAVTFDHADDYLEKMKHQFVIADPSERQQMITSQINAIAQENNWRIDLD 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLLEE+ LVE+ F+G F++KYL +PEE++ ++K +Q+ F RT +G L FI Sbjct: 241 EDLLEEVTNLVEYPTAFVGDFEEKYLSVPEEVLVTSMKEHQRYFDVRTLDGELLPHFI-- 298 Query: 307 SNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 A +G A +++GN +V+ ARLEDA F +N D Sbjct: 299 ---SARNGDAVKIDNVIKGNQKVLTARLEDAEFF--------------------YNEDKK 335 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADVALVDRAIVLS 418 +D + +L V FH KIG+ E++ R+ +++G + L ++ + RA + Sbjct: 336 LTIDHCVEKLKQ--VTFHEKIGSLYEKMQRVGLAAQIIGNTVG-LTQEELTDLQRAAQIY 392 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFPELQG +G++YA++Q E + AI EH P +P +KI ++ Sbjct: 393 KFDLVTNMVGEFPELQGIMGEKYALIQGEKPTVAQAIREHYMPISAEGELPQSKIGAVLA 452 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 +ADKLD+L+ F+A++ PSGS DPYALRR T GIIRI+ E + P +Q E+ Sbjct: 453 IADKLDSLLAFFAVDMVPSGSNDPYALRRQTYGIIRILAEKRWYFPFAQLQEEIREAINA 512 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + F RL+ +L ++ RHD+IEA+L ++ T+ + + L Sbjct: 513 QPEIFGIQLAAGQEQVTDFVKSRLRQFLLSKNTRHDVIEAVLGARQADISTLFETAQMLR 572 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY-AVISDFGTH 637 E F S + + +++ + +K E + I P ++E LY AV++ Sbjct: 573 EHLQDT---DFKPSMEALTRVINLAKKAELEQAA-IDPALFENDSETALYEAVLT----- 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ H+ + L ++ IE +FDQ +V V+D ++R NR +LL I + L V + Sbjct: 624 VENKFPHQTMEENYQSLVALRPLIEAYFDQTMVMVEDEQIRRNRFALLDKIAKMSLAVAS 683 Query: 698 VQKIV 702 + ++ Sbjct: 684 LDALI 688 >gi|116333401|ref|YP_794928.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus brevis ATCC 367] gi|122269912|sp|Q03SC5|SYGB_LACBA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116098748|gb|ABJ63897.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus brevis ATCC 367] Length = 691 Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 222/734 (30%), Positives = 350/734 (47%), Gaps = 84/734 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EE+PA + A + L LKEE V Y ++ + TP RL + + GL+ Sbjct: 5 FLLEIGLEEMPAHVVTPAIKQLVKRTADYLKEERVDYDEIKPFSTPRRLAVLITGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-- 114 + E GP G KA GF R GL T D K+ KG Y+ V + Sbjct: 65 RDISESVKGPAKKIAQDAEGNWSKAAIGFTRGQGL-TTDDITFKE--IKGTEYVYVDKFI 121 Query: 115 --KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +P + LK + I + +P M+WST H F +IRP++ ++ +L A+ Sbjct: 122 AGEPVATVLAGLKDV----ITAMTFPTMMKWSTHH-----FQYIRPIRWLVALLDAD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + ++ T GHRF I + + Y DL V+ D + R++ I Sbjct: 170 --VIPFSILDVTTDRNTRGHRFLGKD-ISIATAADYEGDLTSEFVIADADKRKSMIKTQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +LA+ G + D LLEE+ LVEW F GSFD+KYL +PEE++ +++ +Q+ F Sbjct: 227 DKLAADHGWTVNVDAGLLEEVNNLVEWPTAFAGSFDEKYLTIPEEVLITSMRDHQRFFYA 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L FI V N D +V GN +V+ ARLEDA+ F+ DQ Sbjct: 287 RDAQGQLLPTFISVRNGNDHDL-QNVVSGNEKVLTARLEDAMFFYTEDQK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVA 409 K + + RL V FH KI T E++SR++ + +A+ L DA Sbjct: 336 ----------KTIADYVERLKT--VSFHDKISTMAEKMSRVKAIAGVLAKHVGLNDAQTK 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V RA + K DL T +V EF ELQG +G++YA+LQ E+ + AI EH +P +P Sbjct: 384 AVLRASEIYKFDLVTGMVGEFAELQGVMGEKYALLQGEDPAVAQAIREHYEPISADGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + ++LADK D+++ F+A PSGS DPYALRR GI+RI + + +P++ Sbjct: 444 ASVPGAVLALADKFDSILTFFAAGMIPSGSNDPYALRRQATGIVRIAQDQQWSLPVADLA 503 Query: 530 E---------------DQ-----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + DQ L+ F DR++ L RHD+I+A+ + ++L Sbjct: 504 QAFVAAETTANVAPKLDQAGQIDALVNFIKDRIRKILRSAKQRHDIIDAVTAGSSSDVLQ 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLY 628 I L A + + S R+ + + +K E+ + + P ++E +L+ Sbjct: 564 IFTAADILASHADDANFKDVIESLTRVIR---LAQKAPAEVAATTVDPALFENDSEGQLH 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++ T ++ + Y + D I I +FD +V D VR+NRL+ L + Sbjct: 621 QGVATVATAAKDGL-TALYTALAD----IQPVIAAYFDATMVMAKDDAVRNNRLAELSRL 675 Query: 689 KNIILIVINVQKIV 702 ++ L + ++ ++V Sbjct: 676 ADLALALGDLDQLV 689 >gi|261341815|ref|ZP_05969673.1| hypothetical protein ENTCAN_08299 [Enterobacter cancerogenus ATCC 35316] gi|288316188|gb|EFC55126.1| glycyl-tRNA synthetase, beta subunit [Enterobacter cancerogenus ATCC 35316] Length = 689 Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 206/718 (28%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVANLAASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L + +I Sbjct: 124 GESAEALLPNMIATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDTVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + + + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGVASDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARQIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-TQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNAKVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + ++ ++ L E L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + E I+ FF++V+VNV+D+E+R NRL++L+ ++ + L V ++ Sbjct: 628 FFAEGRYQEALVELSELREAIDAFFEKVMVNVEDQELRINRLTMLEKLRELFLRVADI 685 >gi|313111470|ref|ZP_07797271.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 39016] gi|310883773|gb|EFQ42367.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 39016] Length = 685 Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 216/720 (30%), Positives = 342/720 (47%), Gaps = 68/720 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAED-LSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + E LS I GL K G+ Y R Y P RL + ++ L+ Sbjct: 6 DFLVELGTEELPPKALNSLGEAFLSGIEKGL-KAAGLSYAAARFYAAPRRLAVLVEQLAV 64 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQ-IKKDPKKGDVYLAVL 113 P++ GP + G +A GF + G+ D Q I K K + Sbjct: 65 QQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGV----DLQHIDKSGPKLRFSQTIA 120 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +P +L IV ++ ++P PK MRW+ ++RP + L +L +D Sbjct: 121 GQPA---AGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQ-WLVMLFGDD--- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 169 -VVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKRVA 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 228 ELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLL 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI V+N++ S IV GN +VV RL DA F+K+D+ Sbjct: 288 DANNKLLPRFITVANVE-SKAPENIVSGNEKVVRPRLTDAEFFFKQDKK----------- 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL+ RL +VVF A++GT E+ R+ L IA+ I + R Sbjct: 336 ---------QPLESFNERLR--NVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNAAR 384 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 385 AGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPSTLT 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 445 GAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNAAV 504 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + ++ F DRL+ D + + +++ + + L ++ + Sbjct: 505 EQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQ 564 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K E+ + L+ AEK L + +++ + + Sbjct: 565 AFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAESEV 621 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V ++ Sbjct: 622 APLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADI 681 >gi|207727975|ref|YP_002256369.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum MolK2] gi|206591218|emb|CAQ56830.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum MolK2] Length = 697 Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 216/701 (30%), Positives = 352/701 (50%), Gaps = 70/701 (9%) Query: 31 GLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKA---- 81 GLL EEG + + TP RL + G+ +P++ + E++ P A GK A Sbjct: 37 GLL-EEGA---QVEGFATPRRLAAAIAGVRRAAPDRELREKVLPVNIAFDAEGKPAAPLV 92 Query: 82 --IDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWP 138 + +S G+++I+ +++ P K + L+ D L+ + I +P P Sbjct: 93 KKLAALAKSVGVESIAPETLERAPDGKAESLFYRYTARGALLADGLQAALTQTIAGLPIP 152 Query: 139 KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 K M + + ++RP ++ +L E +++ L GN+T GHRF + Sbjct: 153 KVMTYQRPSG--DSVQFVRPAHRLIALLDDEVIPARVLGLQ-----SGNVTLGHRFLSAG 205 Query: 199 PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV 257 I + Y L+ + V+ R+ AI A L +A +V + LL+E+ LV Sbjct: 206 EIVIPHATAYASTLKSQGKVIAGYAERKEAI--RAELLKAAGADTVVMPEALLDEVNALV 263 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAA 317 EW ++ F++++L +P+E + LT++TNQK F +G L N F++VSN+ A+D A Sbjct: 264 EWPMIYPCHFEEQFLEVPQECLILTMQTNQKYFALTDAQGHLRNRFLIVSNL-ATDTPQA 322 Query: 318 IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 I++GN RVV RL DA F++ D+ KPL R+ L V Sbjct: 323 IIEGNERVVRPRLADARFFFEHDKK--------------------KPLADRVPLLAR--V 360 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 V+H KIGTQ ERVSR++ + ++A + ADVA RA +L+KADL T++V EFPELQG + Sbjct: 361 VYHNKIGTQLERVSRLQAIAGQLADKLGADVAHASRAALLAKADLLTDMVGEFPELQGTM 420 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA E A EH +PR + +P V+LADKL+TL+ W I P+ Sbjct: 421 GTYYARHDGEAADVALACSEHYQPRFAGDALPGTATGTVVALADKLETLVGIWGIGLAPT 480 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLIL-FFHDRL 542 G KDP+ALRR LGI+R+++E + + +++ +E D I F +DRL Sbjct: 481 GEKDPFALRRHALGILRMLIEKPLALGIAEVLEVAAASFEGIAAVKPDPAAITDFLYDRL 540 Query: 543 KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 + YL D+ + +EA++ L IV ++ + F + + E + KRI IL Sbjct: 541 RSYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAALPQAEALAAANKRITNIL-- 598 Query: 603 EEKKNREISL-EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 K +I++ + PQ L +AE+ L+ ++ H+ ++ + L + E + Sbjct: 599 ---KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFARGDFTTALKTLAGLREAV 655 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 656 DSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696 >gi|301066555|ref|YP_003788578.1| glycyl-tRNA synthetase subunit beta [Lactobacillus casei str. Zhang] gi|300438962|gb|ADK18728.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus casei str. Zhang] Length = 689 Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 209/712 (29%), Positives = 338/712 (47%), Gaps = 84/712 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 5 YLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGVIDQYATPRRLALLIHDLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E+ GP G KA GF R G+ T D K VYL K Sbjct: 65 ADVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGM-TPDDIVFKTIKGVDYVYLHKAIKG 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K +L ++ V I+ + +P M+W F +IRP+ ++ +L + I+ Sbjct: 124 KTAAA-ILPGMLDV-IKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDAIV 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H++A Sbjct: 172 PMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQIA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 231 ADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARDAS 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 291 GKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQKR------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDR 413 ++ +D+ A V FH KI + ++++R RV+ +A L D A +DR Sbjct: 337 ---SIADDVDRLKA------VSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADLDR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + + Sbjct: 388 AASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPESLV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE--------------- 518 +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I + Sbjct: 448 GTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTTIA 507 Query: 519 ---------NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 N +D Q Q+L F DR K L + IRHD+++A+ + +L Sbjct: 508 DALKAAGKTNNLDFAAHQ----QDLNAFMIDRAKQVLQAQKIRHDIVDAVTVRADADLAG 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+D K L+ + + + R+ +I K +++ +++ +E +LY Sbjct: 564 ILDAAKILSAHADDTDFKPVMEALGRVLRI-----TKKQQVKVDVDTAKFENPSEGQLY- 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 D + D + L ++ +PI +FD +V DD+ +R NR Sbjct: 618 ---DATVATAKKFDDEPTEADYQALKALADPINAYFDATMVMADDQAIRQNR 666 >gi|262273136|ref|ZP_06050953.1| glycyl-tRNA synthetase beta chain [Grimontia hollisae CIP 101886] gi|262222892|gb|EEY74200.1| glycyl-tRNA synthetase beta chain [Grimontia hollisae CIP 101886] Length = 693 Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 206/724 (28%), Positives = 343/724 (47%), Gaps = 67/724 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LKE + ++ ++ Y TP RL L + L+ Sbjct: 4 NFLIELGTEELPPTQLRTLAEAFAANFEQELKEAELAHEGIKWYATPRRLALKVSALAEQ 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G++ ++ D KG+ L Sbjct: 64 QADKVVEKRGPAVSAAFDADGNPTKAAQGWARGCGIEVADADRMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +D++ + A+ +P K MRW + +IRP+K++ +L +++ Sbjct: 122 KGQNTKDIVVALADKALANLPIAKPMRWGDKET-----LFIRPVKTLTILL-----GDEL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ++ + + GHRF + + D Y LEE V+ D E R+ I+ DA + Sbjct: 172 VEGTIMGVGSTRTIRGHRFMGEAEFTIDNADQYPAILEERGKVIADYEARKATIIADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + DL+EE+ LVEW V +F++K+L +P E + T+K +QK F + Sbjct: 232 AAKQLGGVADLEDDLVEEVTSLVEWPVVLTATFEEKFLKVPSEALVYTMKGDQKYFPVYS 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 EDKQLLPNFIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F+ D +PL R+ +L+ +F ++GT ++ RI L IA I ADV RA Sbjct: 333 --FDTDRKRPLIDRLPQLET--AIFQKQLGTIKDKTDRITELAGYIADKIGADVEKAKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF E QG +G YA E A+ E PR + +P + +S Sbjct: 389 GLLAKCDLMTSMVFEFTETQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPGDGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 +++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E D+ L+ + Sbjct: 449 SALAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYDLDLTDLVAKAKS 507 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++I F R + + D D I+A+L + Sbjct: 508 LFANEDGSNRLTNENVEADVIEFMLGRFRAWYQDEGHSVDAIQAVLAMRPTQPADFDKRV 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K + F S E + KR+ ILA K + E+S I+ + L+ +AEK L ++ Sbjct: 568 KAVTHFRSLDAAESLAAANKRVGNILA---KFDGELSDTINSELLVEDAEKALADKVTAM 624 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y L + EP++ FFD V+V +D ++ NRL+LL +++ + Sbjct: 625 VEALAPVFAAGDYQTALTQLAELREPVDTFFDNVMVMAEDEALKANRLALLNTLRSQFMN 684 Query: 695 VINV 698 V ++ Sbjct: 685 VADI 688 >gi|296877058|ref|ZP_06901099.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 15912] gi|296431919|gb|EFH17725.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 15912] Length = 678 Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 211/698 (30%), Positives = 355/698 (50%), Gaps = 79/698 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + VP + + +P SM W+ + F +IRP+ + L +L+ +A +DLD +I Sbjct: 132 S-VPELLASLTFPVSMHWAN-----NTFEYIRPVHT-LTVLLGNEA----LDLDFLDIQS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGQLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ LK + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQK------------LK--------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVSRAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++Q +L F + R + D+ +A+L N + D+++ ++K + + Sbjct: 517 DNQAEVLNFIKARVDKMMGRTPK-DIKDAVLAGSN---FVVADMLEAAEALSEASKTDGY 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRY 647 + + + + + EK + ++++ S L E EK L I D + S K Sbjct: 573 KAAVESLSRAFNLAEKADASVAVDAS----LFENDQEKALAKAIEDL--ELTGSASDKLA 626 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FFD +V +D V++NRL+LL Sbjct: 627 Q-----LFALSPVIDAFFDNTMVMAEDEAVKNNRLALL 659 >gi|327535692|gb|AEA94526.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis OG1RF] Length = 694 Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 217/735 (29%), Positives = 365/735 (49%), Gaps = 89/735 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L DK+LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDKELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLS 683 K LY ++D + Y + +L P I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVNDLSEAFATRTIAENYEALVNL-----RPLIDAYFNETMVMVEDEKVKQNRLK 673 Query: 684 LLQYIKNIILIVINV 698 L I + L + ++ Sbjct: 674 QLMQIAKMALSIASL 688 >gi|262375083|ref|ZP_06068317.1| glycyl-tRNA synthetase beta subunit [Acinetobacter lwoffii SH145] gi|262310096|gb|EEY91225.1| glycyl-tRNA synthetase beta subunit [Acinetobacter lwoffii SH145] Length = 689 Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 206/720 (28%), Positives = 349/720 (48%), Gaps = 68/720 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + K + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKKLRDALHAETVKGLKDAGLAFDSIEAYAAPRRLALKIVNVDAAQA 66 Query: 65 EKIEERLGPRVGAG-------KKAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRK 115 + + GP A KA++GF+R G+ +S Q K K + L+ Sbjct: 67 DTQKRFDGPAKQAAFDAEGNPTKALEGFMRGQGITVDQVSTFQAGKVEK-----VCYLKD 121 Query: 116 PKRLIEDVL-KTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K DVL I+ A+ +P K MR + + + ++RP+K ++ + Sbjct: 122 VKGQSLDVLLPQILQNALDNLPIAKRMRSAASRT-----EFVRPVKWVVLL-----KDND 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++D +++ GN+T+GHRFHAP I + D Y+ L+ A V+ E R+ I Sbjct: 172 VVDATIQDHKAGNVTFGHRFHAPEAITLAHADEYLAKLKAAHVVASFEERQATIDQQVKA 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA V + DL +E+ LVEW SF++++L +P+E + T++ NQK F Sbjct: 232 LADEVNAIAIVPADLRDEVTALVEWPVALRASFEERFLAVPQEALITTMQDNQKYFCLVN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 292 ADNKLQPYFITVSNIESKDP-TQIIEGNEKVVRPRLSDAEFFFLQDQK------------ 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L ++VF A++GT + RI L +A + A ++A Sbjct: 339 --------QPLASRKEKL--ANMVFQAELGTLWNKSERIAKLAVALAPITGAKAEDAEKA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL +E+V EFPELQG G YA L+ EN +++ E P+ + +P K Sbjct: 389 ALLAKCDLTSELVGEFPELQGIAGTYYARLEGENAEVAESLGEQYLPKFAGDVLPKTKTG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 T++LAD+LDTL + I + P+GSKDP+ALRR+ +GI+R++ EN++D+ + I+ Sbjct: 449 TTIALADRLDTLTGIFGIGQAPTGSKDPFALRRSAIGILRLVTENELDVSIEDLIKLALA 508 Query: 531 ---------DQNL---ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 D+ L + F R + D+ + D+I+A+ + L + +N Sbjct: 509 AYGDVLKDHDKTLADAVAFLEGRYRAKYEDQGVAVDVIQAVQALSPKSPLDFDKRVNAVN 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA E + +E + L+ +AEK L+A ++ + Sbjct: 569 HFRALPEAAALAAANKRVANILAKEAAPEGSV-VEAN---LVEDAEKALFAELAKIAPQV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + K Y L ++ P++ FFD V+V DD +++ NRL +L ++ + V ++ Sbjct: 625 EPLFAAKDYTAALSALAALRAPVDAFFDGVMVMADDADLKANRLRMLAQLRELFTKVADI 684 >gi|254672590|emb|CBA06277.1| glycine tRNA synthetase beta subunit [Neisseria meningitidis alpha275] Length = 687 Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 215/660 (32%), Positives = 338/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 L +L D I+++ + + N T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HG-LVVLHGGD----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNASVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEQTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|83746124|ref|ZP_00943179.1| Glycyl-tRNA synthetase beta chain [Ralstonia solanacearum UW551] gi|207742376|ref|YP_002258768.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum IPO1609] gi|83727307|gb|EAP74430.1| Glycyl-tRNA synthetase beta chain [Ralstonia solanacearum UW551] gi|206593766|emb|CAQ60693.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum IPO1609] Length = 697 Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 216/701 (30%), Positives = 352/701 (50%), Gaps = 70/701 (9%) Query: 31 GLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKA---- 81 GLL EEG + + TP RL + G+ +P++ + E++ P A GK A Sbjct: 37 GLL-EEGA---QVEGFATPRRLAAAIAGVRRAAPDRELREKVLPVNIAFDAEGKPAAPLV 92 Query: 82 --IDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWP 138 + +S G+++I+ +++ P K + L+ D L+ + I +P P Sbjct: 93 KKLAALAKSVGVESIAPETLERAPDGKAESLFYRYTARGALLADGLQAALTQTIAGLPIP 152 Query: 139 KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 K M + + ++RP ++ +L E +++ L GN+T GHRF + Sbjct: 153 KVMTYQRPSG--DSVQFVRPAHRLIALLDDEVIPARVLGLQ-----SGNVTLGHRFLSAG 205 Query: 199 PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV 257 I + Y L+ + V+ R+ AI A L +A +V + LL+E+ LV Sbjct: 206 EIVIPHATAYAGTLKSQGKVIAGYAERKEAI--RAELLTAAGADTVVMPEALLDEVNALV 263 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAA 317 EW ++ F++++L +P+E + LT++TNQK F +G L N F++VSN+ A+D A Sbjct: 264 EWPVIYPCHFEEQFLEVPQECLILTMQTNQKYFALTDAQGHLRNRFLIVSNL-ATDTPQA 322 Query: 318 IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 I++GN RVV RL DA F++ D+ KPL R+ L V Sbjct: 323 IIEGNERVVRPRLADARFFFEHDKK--------------------KPLADRVPLLSR--V 360 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 V+H KIGTQ ERVSR++ + ++A + ADVA RA +L+KADL T++V EFPELQG + Sbjct: 361 VYHNKIGTQLERVSRLQAIAGQLADKLGADVAHASRAALLAKADLLTDMVGEFPELQGTM 420 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA E A EH +PR + +P V+LADKL+TL+ W I P+ Sbjct: 421 GTYYARHDGEAADVALACSEHYQPRFAGDALPGTATGTVVALADKLETLVGIWGIGLAPT 480 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLIL-FFHDRL 542 G KDP+ALRR LGI+R+++E + + +++ +E D I F +DRL Sbjct: 481 GEKDPFALRRHALGILRMLIEKPLALGIAEVLEVAAASFEGIAAVKPDPAAITDFLYDRL 540 Query: 543 KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 + YL D+ + +EA++ L IV ++ + F + + E + KRI IL Sbjct: 541 RSYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAALPQAEALAAANKRITNIL-- 598 Query: 603 EEKKNREISL-EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 K +I++ + PQ L +AE+ L+ ++ H+ ++ + L + E + Sbjct: 599 ---KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFARGDFTTALKTLAGLREAV 655 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 656 DSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696 >gi|15602967|ref|NP_246039.1| glycyl-tRNA synthetase subunit beta [Pasteurella multocida subsp. multocida str. Pm70] gi|13431896|sp|P57905|SYGB_PASMU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|12721444|gb|AAK03186.1| GlyS [Pasteurella multocida subsp. multocida str. Pm70] Length = 689 Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 210/721 (29%), Positives = 355/721 (49%), Gaps = 65/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ +++++ + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENMELELNQAGLAFESVQWFAAPRRLAVKVLALATS 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ A + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGISVEQAERVATDKGEWLVHRATIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++LK +V A+ K+P PK MRW+ +IRP+ ++ +L ++ Sbjct: 125 QPTK---NLLKDMVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ ++ + GHRF ++ D Y L+E V+ D R+ IL + Sbjct: 172 LIEGEILGVESARTLRGHRFLGEREFQISHADQYPALLKEKGSVVADFNDRKALILAKSQ 231 Query: 234 RLASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+A+G + +ED DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EKATALGGVADIED-DLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPI 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L FI VSNI D + I++GN +VV RL DA F Sbjct: 291 YDKDGKLLPHFIFVSNINPDDP-SKIIEGNEKVVRPRLTDAEFF---------------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 F DL + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD Sbjct: 334 ----FKTDLKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADEVKAK 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + Sbjct: 388 RAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSL 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 ++ V+LADK DTL + I ++P GS DP+ALRRA LG +RII+E + + L++ ++ Sbjct: 448 VASAVALADKFDTLTGIFGIGQQPKGSADPFALRRAALGALRIIVEKNLPLDLAEIVKKS 507 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++++ F R + + D I D+I+A+L ++ + Sbjct: 508 SALFGDKLTNANVVEDVVEFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPSDFDARVRAV 567 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + F + E + KR+ ILA K E+ I AEK L + Sbjct: 568 SHFRALEAAEALAAANKRVSNILA---KVEGELPANIDTTLCAEAAEKVLAEQVIALQAE 624 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + Y D L ++ EP++ FFD V+VN ++ ++R NRL++L ++N+ L V + Sbjct: 625 LAPLFAKGEYQVALDRLAALREPVDTFFDNVMVNAENPQLRQNRLAILNNLRNLFLQVAD 684 Query: 698 V 698 + Sbjct: 685 I 685 >gi|261250632|ref|ZP_05943207.1| glycyl-tRNA synthetase beta chain [Vibrio orientalis CIP 102891] gi|260939201|gb|EEX95188.1| glycyl-tRNA synthetase beta chain [Vibrio orientalis CIP 102891] Length = 688 Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 207/699 (29%), Positives = 331/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + +Q ++ Y P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEVELKGADLAHQGVKWYAAPRRLALKVSALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 64 QADKVVEKRGPAVSVAFDADGIATKAAQGWARGNGITVEQADRLKTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQATSEIVVELAAKALGNLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++S + Y LEE V+ D E R+ IL D+ + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILADSQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGTADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 DNNKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ IDADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIDADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDELPSTGIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 449 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++I F R + D D+I+A+L +K ++ Sbjct: 508 LFGDRLTNDNVETDVIEFMLGRFNAWYKDEGFSVDIIQAVLANRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLAGLREPVDAFFDNVMVMADDEALK 663 >gi|312958112|ref|ZP_07772635.1| Glycyl-tRNA synthetase beta subunit [Pseudomonas fluorescens WH6] gi|311287543|gb|EFQ66101.1| Glycyl-tRNA synthetase beta subunit [Pseudomonas fluorescens WH6] Length = 684 Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 202/721 (28%), Positives = 340/721 (47%), Gaps = 64/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + AE + L G+ ++ + Y P RL + L L Sbjct: 5 DFLVELGTEELPPKALNTLAEAFLAGIEKGLHTAGLKFEAKKVYAAPRRLAVLLTALETQ 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ GP G +A GF + G++ +I + K + K Sbjct: 65 QPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGVEL---SEIDQSGPKLRFSQVITGK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L TIV ++ +P PK MRW ++RP + ++ +L +++ Sbjct: 122 P---TASLLPTIVEDSLNDLPIPKRMRWGARKE-----EFVRPTQWLVMLL-----GDQV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ ++ G + GHRFH P +++ S Y+ DL A VL D RR I L Sbjct: 169 IECNILAQKAGRDSRGHRFHHPQSVRITSPASYLNDLRAAYVLADANERRELISKRTEEL 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 229 ARLQEGTAIVPPSLLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDV 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ K+ Sbjct: 289 DGKLLPRFITVANIESKDP-QQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLE 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FNL L +VVF K+G+ ++ R+ L IA I D A RA Sbjct: 339 DFNLRLQ-------------NVVFQEKLGSVYDKAVRVSKLAAYIAPRIGGDAAWAARAG 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +PT Sbjct: 386 LLSKCDLATEMVGEFPEMQGVAGYYYALNDGEADDVALALNEQYMPRGAGAELPTTLTGA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI+++ K+D+ L+Q + Sbjct: 446 AVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLTQAVVFAVGQ 505 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ F DRL+ D + + ++ + + L ++ + F Sbjct: 506 FGAKVKQAGLAEQVLEFVFDRLRARYEDEGVDVSVYLSVRALQPASALDFDQRVQAVQAF 565 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ +L+ E + ++ P E L + I+ ++ Sbjct: 566 RKLPEADALAAVNKRVSNLLSKAEGLG---NADVDPGLFADAKEFSLNSAIAKAENAVKP 622 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + Y + L ++ EP++ FF+ V++N +D VR NR ++L ++++ + + ++ Sbjct: 623 LIAERNYAEALARLATLREPVDAFFEAVMINAEDAGVRKNRYAMLARLRSLFINIADIST 682 Query: 701 I 701 + Sbjct: 683 L 683 >gi|161505806|ref|YP_001572919.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189082271|sp|A9MLF8|SYGB_SALAR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160867153|gb|ABX23776.1| hypothetical protein SARI_03982 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 689 Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 210/722 (29%), Positives = 337/722 (46%), Gaps = 69/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGKVEWFAAPRRLALKVANLAESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E ++ +V ++ K+P PK MRW S ++RP+ ++ +L + +I Sbjct: 124 GESTEALVPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDNVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDTADQYPQILLERGKVIADYEARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI+++D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESTDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGT 636 + + + KR+ ILA K E +I +L EA + R V+ D Sbjct: 571 RTLEEASALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD--- 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 624 KLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVA 683 Query: 697 NV 698 ++ Sbjct: 684 DI 685 >gi|299067915|emb|CBJ39129.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum CMR15] Length = 697 Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 213/701 (30%), Positives = 353/701 (50%), Gaps = 70/701 (9%) Query: 31 GLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKA---- 81 GLL EEG + + TP RL + G+ +P++ + E++ P A GK A Sbjct: 37 GLL-EEGA---QVEGFATPRRLAASITGVRRTAPDRELREKVLPVNIAFDAEGKPAAPLT 92 Query: 82 --IDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWP 138 + +S G+ TI+ +++ P K + ++ D L+ + I +P P Sbjct: 93 KKLAALAKSIGVDTIAPESLERAPDGKAESLFHRYTARGAVLADGLQAALSQTIAGLPIP 152 Query: 139 KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 K M + + + ++RP ++ +L +++I + + GN+T GHRF + Sbjct: 153 KVMIYQRPNG--DSVQFVRPAHRLIALL-----DDEVIPAGVLGLQSGNVTLGHRFLSAG 205 Query: 199 PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV 257 I + Y L+ + V+ R+ AI A L +A +V + LL+E+ LV Sbjct: 206 EIVIPHATAYASTLKSQGKVIAGYAERKEAI--RAELLKAAGADTVVMPEALLDEVNALV 263 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAA 317 EW V+ F++++L +P+E + LT++TNQK F +G L N F++VSN+ A++ A Sbjct: 264 EWPVVYPCHFEEQFLAVPQECLILTMQTNQKYFALTDAQGHLRNRFLIVSNL-ATETPRA 322 Query: 318 IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 I++GN RVV RL DA F++ D+ KPL R+ +L V Sbjct: 323 IIEGNERVVRPRLADARFFFEHDKK--------------------KPLADRVPQLSR--V 360 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 V+H KIGTQ ERVSR++ + ++A+ + ADVA RA +L+KADL T++V EFPELQG + Sbjct: 361 VYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRAALLAKADLLTDMVGEFPELQGTM 420 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA E A EH +PR + +P V+LADKL+TL+ W I P+ Sbjct: 421 GTYYARHDGEAEDVALACSEHYQPRFAGDALPGTTTGTVVALADKLETLVGIWGIGLAPT 480 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL---------------FFHDRL 542 G KDP+ALRR LGI+R+++E + + +++ +E F +DRL Sbjct: 481 GEKDPFALRRHALGILRMLIEKPLALGIAEVLEAAATSFEGIAAVKPDLAAITDFLYDRL 540 Query: 543 KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 + YL D+ + +EA++ L IV ++ + F + + E + KRI IL Sbjct: 541 RGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAALPQAEALAAANKRITNIL-- 598 Query: 603 EEKKNREISL-EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 K +I++ + PQ L +AE+ L+ ++ H+ ++ + L + E + Sbjct: 599 ---KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFARGDFTTALKTLAGLREAV 655 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 656 DSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696 >gi|295098692|emb|CBK87782.1| glycyl-tRNA synthetase beta chain [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 689 Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 206/718 (28%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVANLAASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L + +I Sbjct: 124 GESAEALLPDMIATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDTVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + + + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGVASDRVIRGHRFMGESEFTIDNADQYPQILLERGKVIADYEQRKAKIKADAEDA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D + I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-SQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNAKVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + ++ ++ L E L + ++ Sbjct: 571 RTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEISLAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + + I+ FF++V+VNV+D+E+R NRLS+L+ ++ + L V ++ Sbjct: 628 YFAEGRYQEALVELAELRDVIDAFFEKVMVNVEDKELRINRLSMLEKLRELFLRVADI 685 >gi|332288855|ref|YP_004419707.1| glycyl-tRNA synthetase subunit beta [Gallibacterium anatis UMN179] gi|330431751|gb|AEC16810.1| glycyl-tRNA synthetase subunit beta [Gallibacterium anatis UMN179] Length = 689 Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 214/728 (29%), Positives = 358/728 (49%), Gaps = 79/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + L + G+ + + + +P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLAVAFKDNVEQELTQAGLAFDAVEWFASPRRLAVKVLGLAEA 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKEVEKRGPAVAAAFDAEGKPTKAAEGWARGCGISVDQAERLVTDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ A+ K+P PK MRW + +IRP+ ++ + E + K Sbjct: 125 QPTK---NLLLGIISNALAKLPIPKPMRWGDKNE-----QFIRPVHTVTLLFGDELIEGK 176 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 I+ + G GHRF + + D Y + L E+ V+ D E R+ I DA Sbjct: 177 ILG-----VKSGRTIRGHRFLGQQEFTIDNADQYPQLLAEKGSVIADFEQRKAIIRQDAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A+ VG ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 KAAAKVGGIADIEEDLLDEVTSLVEFPVVMTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLS 348 + G L FI VSNI D +++++GN +VV RL DA F+K D ++NLP L Sbjct: 292 DQNGKLLPNFIFVSNINPQDQ-SSVIEGNEKVVRPRLSDAEFFFKTDLKQRLEDNLPRLK 350 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V+F ++GT ++ RI L +IA I ADV Sbjct: 351 T---------------------------VLFQQQLGTLFDKTERIEKLSGEIAAQIGADV 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A +RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + + Sbjct: 384 AKAERAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDEL 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + ++ +V+LADK DTL+ + I + P G KDP+ALRRA LG++RII+E K+ + L Sbjct: 444 PHSLVACSVALADKFDTLVGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLVDL 503 Query: 529 IED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++++ F R + + + I D+I+A+L Sbjct: 504 AQKAAALYGDKLSNANVVEDVVDFILGRFRAWYQEEGIAVDVIQAVLACRPTKPADFDAR 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK---KNREISLEISPQYLLLEAEKRLYAV 630 +K +N F + + + KR+ IL+ + +N ++SL PQ + L AE+ L Sbjct: 564 VKAVNHFRTLDAAQALAAANKRVQNILSKVDGALPENIDLSLCREPQEINL-AERVL--- 619 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +Q + Y + L + E ++ FFD V+VN +D ++R NRL+LL+ +++ Sbjct: 620 --ELQRELQPLFEKGDYQTVLSRLADLRESVDSFFDNVMVNAEDEKLRQNRLALLKNLRD 677 Query: 691 IILIVINV 698 + + ++ Sbjct: 678 LFFKIADI 685 >gi|93006879|ref|YP_581316.1| glycyl-tRNA synthetase subunit beta [Psychrobacter cryohalolentis K5] gi|92394557|gb|ABE75832.1| Glycine--tRNA ligase [Psychrobacter cryohalolentis K5] Length = 697 Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 207/733 (28%), Positives = 354/733 (48%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ EE+P + + L + L + + + +++ + P RL + ++G+S Sbjct: 1 MSTILFELGCEELPPKSLKPLRDALQESVTEQLADANISFDSIKAFAAPRRLAIQIQGIS 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ EE+ GP + A +A GF + G++ I D KGD V Sbjct: 61 DKQPDRTEEKRGPAIKAAFDADGNPTRAAMGFAKGLGIEASKLTTINTD--KGDYVGYVQ 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L I A+ +P K MR + + ++RP++ +L+ DA Sbjct: 119 TIQGQATTELLPAIFQTALDNLPIAKRMRSGASRN-----EFVRPIQ--WAVLMQNDA-- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++D ++ G T GHRFH+P + + Y + L+ V+ D + R+ I N Sbjct: 170 -VVDATIQGHQTGTQTRGHRFHSPDYHNIAHANDYEQLLDGLKVVADFDKRQMLIKNQVK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V + + + LL+E+ LV++ SF+ ++L +P+E + T++ +QK F Sbjct: 229 ALADEVSSDAIVPQSLLDEVTALVDFPIALRASFEARFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI ++NI++ D I++GN +VV RL DA F+ +DQ L +L ES Sbjct: 289 DKAGKLQPYFIFITNIESKDPNQ-IIEGNEKVVRPRLADAEFFFLQDQKQ--PLFALTES 345 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 L R VF K+GT E+ RI L IA L+ +D Sbjct: 346 -----------LKTR---------VFQDKLGTIWEKSERIAKLAAFIAALMQQQGQQIDI 385 Query: 413 ----RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +LSKADL + +V E+PELQG G YA L +E + ++EE P+ + + Sbjct: 386 DQTVRAGILSKADLASSLVGEYPELQGIAGTYYARLNDEPEAVAASLEEQYLPKFSGDVL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + I ++LAD+LDTL+ +AI++ P+GSKDP++LRR+ +GI+RI++E ++ I L Sbjct: 446 PQTPVGICLALADRLDTLVGIFAIDQAPTGSKDPFSLRRSAIGILRILIEKQLPINLVAL 505 Query: 529 IED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 IE ++ F + R + ++ + D I+A+ L Sbjct: 506 IEQAIKGYSTAEGSKIDKMGDTFTQVMAFLNSRYRAMYTEQGVNVDTIQAVQAINPHMPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ + F + + S KR+ ILA K ++ + L AE+ LY Sbjct: 566 DFDQRIRAVQTFSNLPQASMLADSNKRVANILA---KSEVSVADTVDEALLSEPAEQNLY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + T +Q ++ Y Q+ L S+ EP+ FFD V+VN +D ++ NRL+LL+ + Sbjct: 623 ASVKQAQTVVQPLLEQADYTQVLQTLASLDEPLTQFFDNVMVNSEDTALKANRLALLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V ++ ++ Sbjct: 683 RALFLTVADISEL 695 >gi|308390028|gb|ADO32348.1| putative glycyl-tRNA synthetase beta subunit [Neisseria meningitidis alpha710] gi|325201431|gb|ADY96885.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240149] Length = 687 Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 211/660 (31%), Positives = 342/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + N T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q +D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|145590043|ref|YP_001156640.1| glycyl-tRNA synthetase subunit beta [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048449|gb|ABP35076.1| glycyl-tRNA synthetase beta chain [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 712 Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 216/735 (29%), Positives = 358/735 (48%), Gaps = 71/735 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKG-LS 60 L+E+++EE+P + + S + G LK G+ ++ + + TP RL + + LS Sbjct: 13 LLIEVFTEELPPKSLRRLGTSFSEGIFGALKAAGLTTESSKVTSFATPRRLAVQITDVLS 72 Query: 61 PHSPEKIEERLGPR---VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGD-----VYLAV 112 + + E+L P A KA L+ +D + K G+ ++L V Sbjct: 73 QANDYPVREKLLPTSIAFDADGKATPPLLKKLSALGYADLDLSTLEKAGEGKNEALFLNV 132 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWST--THSPISAFSWIRPLKSILCILVAED 170 + K L E +T + + K+P K M + + ++ + RP I+ + Sbjct: 133 IAKGAAL-EQTAQTALNQTLSKLPIAKMMHYQVLQKNGQLADVQFARPAHRIIAL----- 186 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 + I+++ I N T GHRF AP I + D Y LE +A VL + RR I Sbjct: 187 HGDTILNMSSLGIDASNQTEGHRFLAPGVITITDADQYENTLEKQANVLASFDKRRTQI- 245 Query: 230 NDAHRLASAVGLELV-EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +L A G +LV + LL+E+ LVEW ++ FD+++L +P+E + LT++TNQK Sbjct: 246 --ETQLLKAAGADLVLMPESLLDEVTALVEWPAIYECHFDEEFLEVPQECLILTMQTNQK 303 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + G L N F++VSNI+ ++ AI+ GN RVV RL DA F+++DQ Sbjct: 304 YFALTDQHGKLRNRFLVVSNIE-TNKPDAIISGNERVVRPRLSDARFFFQQDQK------ 356 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + L R++ D+ VV+H ++G Q +R R++ + IAQ + D Sbjct: 357 --------------RSLASRVS--DLGRVVYHNQLGNQLDRTKRVQEIAIGIAQKLQVDD 400 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L RA ++K DL T++V EFPELQG +G+ YA E+ A EH PR +++ Sbjct: 401 KLASRAAEIAKTDLLTDMVGEFPELQGIMGRYYANHDGESAEVAAACSEHYMPRFAGDSL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TL+ W + P+G KDPYALRR LGI R++LE + L + Sbjct: 461 PATQTGTILAIADKLETLVGIWGVGLAPTGDKDPYALRRHALGICRLLLEKNFSLSLPEL 520 Query: 529 IE---------------DQNLIL-FFHDRLKLYLHDRDI-----RHDLIEAILRPENDNL 567 IE D I F DRL+ YL D+ + I+A+L + Sbjct: 521 IELARSQFPQKEVQEKADAAAIYEFIIDRLRAYLRDQSVAGKPFTSAEIDAVLSQAPAQI 580 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 ++ + L EF + + + + KRI IL +K I S + L + AE L Sbjct: 581 NDLIGRLSALREFNALPQAAQLAAANKRISNIL---KKTATPIPTACSSKLLQIPAEIEL 637 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + + + + +++ ++ L ++ PI+ FF V+V ++E+RDNRL+LLQ Sbjct: 638 FQALEAITPALNAAYEQRQFVELLKALVALSAPIDQFFADVMVMDPNQELRDNRLALLQQ 697 Query: 688 IKNIILIVINVQKIV 702 + + +V ++ K+ Sbjct: 698 LHQKMNLVADLGKLA 712 >gi|227500713|ref|ZP_03930762.1| glycine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227217171|gb|EEI82520.1| glycine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 688 Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 216/740 (29%), Positives = 361/740 (48%), Gaps = 92/740 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ + L L++E + + + TP R ++L ++ Sbjct: 2 MSNYLLEIGVEEIPSDYVKNTKKQLEDKFKKLIEENKLTCEEVLVESTPRRFAIFLNNVN 61 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EK GP V G K + GFL+ G I+D I++ KG+ Y+ + Sbjct: 62 ADTEEKTISVKGPSVKIAYDEGGQANKPLLGFLKGQGAD-IADVVIRE--FKGEDYIFIE 118 Query: 114 RKPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K K + + +VLK V ++ + +P+SMRW+ + W RP++ + +L Sbjct: 119 KKEKSKSVAEVLKENVYDLVKSISFPRSMRWAG-----KSIRWARPIRWFVSLL-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ D + I NI+ GHR I + +++Y + L+E V+L + R++ IL Sbjct: 169 DEVLTFDAEGIKVSNISKGHRSLGSAEIVIDKIENYEKLLKENYVILRYKDRKDIILKGL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +RLAS VG E ++D+ LL+E+I +VE+ V +G DKKYL LP+E++ +K +Q+ F Sbjct: 229 NRLASEVGGEYMKDESLLDEVINIVEYPTVLIGDIDKKYLELPKEVVTTPMKDHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L F++V N + +++GN +V+ ARLEDA F++ Sbjct: 289 LDENKNLLPYFLVVRN-GDEEFKENVIEGNKKVLVARLEDAKFFYE-------------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--IDADVAL 410 LD+ KPLD + L+ L F +G + R+ L ++ Q I D+ Sbjct: 334 ------LDIKKPLDSYVDELNSL--TFFEGLGNMKLKTDRLTDLTERYRQALAIGEDMTH 385 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA L+KADL T++V EF ELQG +G+ YA E AIEE PR +N+P Sbjct: 386 PIGRAAYLAKADLVTKMVVEFTELQGTMGRIYAKKSGEEERIATAIEEAYMPRSAGDNLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I +S+ADK+DT++ +AI + +GS+DP+ LRRA LGII I L N IDI L + + Sbjct: 446 KTITGIILSIADKMDTIVGLYAIEKYVTGSQDPFGLRRACLGIINIFLANSIDIDLKRLV 505 Query: 530 EDQNLIL-------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 D L+ FF DRLK L D +D + A++ N+L I Sbjct: 506 NDALLVYTEKNELAFDYDTAMAKVLDFFRDRLKNKLIDDGYNYDTVNAVMNVSELNILRI 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L++F + + + RI + + N I L + E+ Y V Sbjct: 566 AKKVASLDKFLEDNEDQISYFT--RIVNLSKDLDDDN------IREDLLENDLERSFYEV 617 Query: 631 ISDFG--------THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 + G ++ E K QIG+ + D+ ++NVD+ ++++NR+ Sbjct: 618 LISLGDFVAVAETDYLAELEKIKETSQIGNE----------YLDKTMINVDNEQLKNNRI 667 Query: 683 SLLQYIKNIILIVINVQKIV 702 +++ + I + +V++IV Sbjct: 668 AMINILAKRIKQIFDVKEIV 687 >gi|240079865|ref|ZP_04724408.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] gi|268596010|ref|ZP_06130177.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] gi|268549798|gb|EEZ44817.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] Length = 687 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 213/660 (32%), Positives = 340/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGRQ-DVYAYEYVQTGKPLGGLLENIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAMPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAGRAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|169830681|ref|YP_001716663.1| glycine--tRNA ligase [Candidatus Desulforudis audaxviator MP104C] gi|238688220|sp|B1I1T4|SYGB_DESAP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169637525|gb|ACA59031.1| Glycine--tRNA ligase [Candidatus Desulforudis audaxviator MP104C] Length = 688 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 210/726 (28%), Positives = 332/726 (45%), Gaps = 68/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D +LEI +EEIPAR A +L+ LL E + Y ++ Y TP RL LY++ L+ Sbjct: 4 DLVLEIGTEEIPARFLPPALAELAEKGRALLAEYRLAYADLAAYGTPRRLTLYVRDLAGD 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++E GP G KA GF RS G+ + D + VY AV ++ Sbjct: 64 QAPLVQEIKGPPKKAAFDIDGVPTKAALGFARSQGV-AVEDLVTRAVGPVEYVY-AVRQE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R ++L + P I + +P+ MRW F ++RP++ ILC+ +++ Sbjct: 122 TGRPAAEILAELGPRLIGALVFPRPMRWGDQD-----FRFVRPIRWILCV-----HGDRV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ + + G T+GHRF + + V + Y LEE V++DP RR + Sbjct: 172 IEFTVAGVRSGPHTWGHRFLSAGRLLVTTAGDYFTLLEENFVIVDPARRREMVWEQVRAA 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+A + +D +LL E+ L+E+ F G F + YL LPE ++ ++ +Q+ F R Sbjct: 232 AAAESGTVADDPELLAEVADLLEYPSAFCGCFPESYLELPEPVLVTPMREHQRYFPVRDG 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ V N A I GN +V+ ARL DA F++ D Sbjct: 292 TGRLMPFFVGVHNGTAEHLNL-IRSGNEKVLRARLADAAFFFRED--------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 L PL R L VVF +GT E+V R+ L ++ + D A Sbjct: 336 -----LEVPLPDRGPELK--KVVFQESLGTMHEKVERLTALAGYLSSALGLDETERAQAH 388 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA VLSK DL T +V EFPELQG +G+EYA+ E + +AI E P E +P + Sbjct: 389 RAAVLSKNDLLTSMVYEFPELQGIMGREYALRAGEAPAVAEAIREQYLPAPGGEELPATR 448 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 + ++LAD+ D L+ + + +P+GS+DPYALRR LGI ++L+ + L F + Sbjct: 449 AGLVLALADRADNLVGAFGMGVQPTGSQDPYALRRQALGICHLLLDTPAYLDLDDFFREA 508 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L FF RL++ DR + + ++EA L + ++ + Sbjct: 509 YAAYGGRLTVEAGEVAAQLADFFGQRLRVLFQDRGLSYGVVEAALAAGHADVRDAWERAT 568 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F S + R + KN + P E LY Sbjct: 569 AVATFQSHPAFADISTAFTRANNL-----AKN-AAGTRVEPALFKDPVEHTLYQAFLQVR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + +RY L + EP++ FFD V+V V++ VR+NRL+LL+ + ++ + Sbjct: 623 EQVEAQIARRRYGAALAALAELREPVDRFFDGVMVMVEEAAVRENRLALLRLVADLFKGI 682 Query: 696 INVQKI 701 ++ K Sbjct: 683 ADLSKF 688 >gi|260222391|emb|CBA31908.1| Glycyl-tRNA synthetase beta subunit [Curvibacter putative symbiont of Hydra magnipapillata] Length = 706 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 215/735 (29%), Positives = 358/735 (48%), Gaps = 69/735 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K E + +L LK +G++ + + + +P RL +++ ++ Sbjct: 5 NLLVELFVEELPPKALKKLGEAFATVLADSLKAQGLVAADAAVTHFASPRRLAVHVAAVA 64 Query: 61 PHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIK--KDPKKGDVYLA 111 P + +K + ++L P G A+ L++ G + +K KD K ++ Sbjct: 65 PQAADKAVSQKLMPVAVGLDASGNATPALLKKLQALGADASAVPALKRAKDGKAEALFYD 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW---STTHSPI-SAFSWIRPLKSILCILV 167 + K L++ + K ++ I K+P PK M + S P ++ S++RP ++ + Sbjct: 125 SMVKGATLVDGLQKALLET-IAKLPIPKVMSYQLQSGCELPGWTSVSFVRPAHGLVALHG 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRR 225 ++ ++ + + GN T GHRF A P+ + D Y L ++ V+ RR Sbjct: 184 SD-----VVPVQALGLQSGNRTEGHRFEAAVSPVVIADADAYAATLAKDGAVIASFAERR 238 Query: 226 NAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I+ A+ VG + +ED LL+E+ LVE V + F+ ++L +P+E + LT+ Sbjct: 239 AEIVRQLDAAAAQVGGGCKPIEDDALLDEVTALVERPNVLICEFEAQFLEVPQECLILTM 298 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F G L N F++VSNI+ D + ++ GN RVV RL DA F+ DQ+ Sbjct: 299 KANQKYFPLLDAAGKLTNKFLVVSNIKPDDA-SFVIGGNERVVRPRLADAKFFF--DQDR 355 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 L+S E K VV+H K+GTQGERV R+R + K IA Sbjct: 356 KKTLASRVEGLGK--------------------VVYHNKLGTQGERVERVRAIAKAIASQ 395 Query: 404 IDADVALV---DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 I D LV D+A L+K DL T++V EFPELQG +G YA+ + AIE+H K Sbjct: 396 I-GDATLVVQADQAAQLAKTDLVTDMVGEFPELQGIMGGYYALNDGLGETVAHAIEDHYK 454 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P N + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR+++E Sbjct: 455 PRFAGDALPRNTAGLVVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRMLVEKD 514 Query: 521 IDIPLSQFIEDQ-------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + + +S ++ L+ F DR L ++ ++A+L L Sbjct: 515 LPLDVSALVQSAVPAFGSLITDASVALVDFMFDRFAGSLREKGYSAQEVDAVLALRPQRL 574 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + F + + + KRI IL KK ++ +S L AEK L Sbjct: 575 GDVAKRLVAVRAFAALPESPALAAANKRISNIL----KKTDDVDAHVSEVLLQEAAEKAL 630 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 +A + Q Y L ++ P++ FF+ V+VN + ++R NRL LL+ Sbjct: 631 FAAMQTVLPQAQGQWQAGDYTASLQSLAALRAPVDAFFEDVMVNAEQMDLRLNRLGLLKS 690 Query: 688 IKNIILIVINVQKIV 702 + + V ++ K+ Sbjct: 691 LHVAMNRVADLSKLA 705 >gi|330806669|ref|YP_004351131.1| glycine--tRNA ligase, beta subunit (glycyl-tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327374777|gb|AEA66127.1| Glycine--tRNA ligase, beta subunit (Glycyl-tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 683 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 206/716 (28%), Positives = 339/716 (47%), Gaps = 61/716 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + A+ + L+ G+ Y+ + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKALNTLADAFLAGIDKGLQAAGLGYEAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K ++ KP Sbjct: 65 QPDRSINLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQSIKGKP- 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P PK MRW+ ++RP + ++ +L +++ID Sbjct: 123 --TASLLPTIVEDSLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLL-----GDQVID 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S +Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQKAGRDSRGHRFHHPQSVRITSPANYLADLRAAYVLADANERRELISKRTEELAT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + +LL+E+ LVEW + SF++++L +P+E + T++ NQK F EG Sbjct: 231 LQEGTAIVPANLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 291 KLLPRFITVANIESKDP-QQIIAGNEKVVRPRLTDAEFFFKQDKK--------------- 334 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL+ RL +VVF K+G+ ++ R+ L IA I D RA +L Sbjct: 335 -----QPLESFNERLR--NVVFQEKLGSVYDKAERVSKLAAFIAPRIGGDAQRAARAGIL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL TE+V EFPE+QG G YA+ E A+ E PRG +PT V Sbjct: 388 SKCDLSTEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 ++ADKLDTL+ + I P+GSKDPYALRRA LG++RI+++ ++D+ L+ + Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKQLDLDLNDAVAFAVNAFG 507 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 ++ F DRL+ D + ++ + + L ++ + F Sbjct: 508 SKVKSAGLADAVLEFIFDRLRARYEDEGVEVATYLSVRALKPGSALDFDQRVQAVQAFRK 567 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ +L+ E + + +Y AE L + I +Q M Sbjct: 568 LPEAAALASVNKRVSNLLSKAEPSVKAVEA----RYFDNAAEFSLNSAIQQAYASVQPLM 623 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L ++ EP++ FF+ V+VN D+ +VR NR +LL ++++ L + ++ Sbjct: 624 EKRDYAEALARLAALREPVDAFFEAVMVNADNEDVRKNRYALLARLRSLFLNIADI 679 >gi|307822586|ref|ZP_07652817.1| glycyl-tRNA synthetase, beta subunit [Methylobacter tundripaludum SV96] gi|307736190|gb|EFO07036.1| glycyl-tRNA synthetase, beta subunit [Methylobacter tundripaludum SV96] Length = 688 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 221/696 (31%), Positives = 341/696 (48%), Gaps = 67/696 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L E+ SEE+P + K + L + L + + + Y TP RL ++++ L+ Sbjct: 6 LLFELGSEELPPKTLLKLSNALLNNITQGLNAAELTFTGSKAYATPRRLAVFIENLATAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+K E+ GP + G+ KA GF S G ++K D KG+ +L+ + Sbjct: 66 PDKTVEKRGPAIQAAFAPDGSPSKAALGFAVSCGTSFDQLERLKTD--KGE-WLSFTQAV 122 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E+++ I+ +I +P K MRW + + ++RP+ +L+ D+ + Sbjct: 123 KGQATENLIPDIIRQSIAGLPIAKRMRWGSFTT-----EFVRPVH--WAVLLYGDS---V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ID ++ + G T GHRFHAP I + + Y L ++ V+ D E R+ I + A + Sbjct: 173 IDTEILGLKTGAATQGHRFHAPQKITLTKPEDYADVLYKQGRVIADLEQRKTLIRDAAQK 232 Query: 235 LASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+AV G +ED DLLEEI L EW G+FD ++L LP E++ T++TNQK F + Sbjct: 233 AAAAVHGQAHIED-DLLEEIAALNEWPVPITGTFDPRFLELPPEVLITTMQTNQKYFPVK 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI SNI++++ +I QGN RVV RL DA FW Sbjct: 292 NADGGLLANFITFSNIESTNP-KSIQQGNERVVTPRLSDAEFFW---------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 N D K L+ R+ L VVF +GT + R++ L K IA ++A++ L +R Sbjct: 335 ----NQDRKKTLEDRVESLS--SVVFQENLGTVFAKTKRVQNLAKFIAGHLNANIELAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL TE+V EF LQG +G+ YA+ NE AIEE P+ + Sbjct: 389 AALLAKTDLMTEMVGEFGNLQGIMGRYYALADNEPEEVALAIEEQYFPKQSGSPTADSTT 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 +++A+K+DTL+ +A+ P+G KDPYALRRA LGI+R I+ENK++I + + E Sbjct: 449 GQVLAIAEKIDTLVGIFAVGLIPTGDKDPYALRRAALGILRTIIENKLNINIIELTEFAG 508 Query: 531 -------DQN-----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 DQ+ +I F DRLK Y D+ D +A++ L + ++ + Sbjct: 509 AQIKTTSDQSGTSDRVIDFIFDRLKGYCLDQGYTADEFDAVITVTPAEPLDFMQRLQAVK 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KRI IL K E S LL EK+L I Sbjct: 569 AFRQLPEAESLAAANKRIRNIL-----KKSESQPAASVGALLEPQEKQLLQAALQSADDI 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 Q + + Y + L + ++ FFD V+V DD Sbjct: 624 QPLLAQRNYQATLNRLAGLRNDVDAFFDHVMVMTDD 659 >gi|253999833|ref|YP_003051896.1| glycyl-tRNA synthetase subunit beta [Methylovorus sp. SIP3-4] gi|253986512|gb|ACT51369.1| glycyl-tRNA synthetase, beta subunit [Methylovorus sp. SIP3-4] Length = 701 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 211/729 (28%), Positives = 361/729 (49%), Gaps = 61/729 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLS 60 + L+E++ EE+P + +K E S L+ +LK +G+ + + Y +P RL ++ + Sbjct: 4 NLLVELFVEELPPKALNKLGEAFSSTLLEVLKSQGLTSETSQVTAYASPRRLAAHISDVV 63 Query: 61 PHSPEK-IEERLGP-RVG--AGKKAIDGFLR---STGLQTISDCQIKKD-PKKGDVYLAV 112 + +K + +L P VG A KA L+ + G + Q+K++ K D+ Sbjct: 64 AKAADKSLSHKLMPATVGLDANGKATPALLKKLTALGADESAVSQLKREHDGKADILFLE 123 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + L+ + A+ K+P PK M + S +++RP ++ + E Sbjct: 124 GTAAGATLSEGLQKALDEALAKLPIPKVMTYQLQDGWTS-VNFVRPAHGLVALHGNE--- 179 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +I + + GN T GHRF A P+ ++ DHY L+ E V+ RR I+ Sbjct: 180 --LIPVSALGLQSGNTTQGHRFEAKVSPVTLRHADHYAEQLQTEGAVIASFAERRAEIVR 237 Query: 231 DAHRLASAVGLEL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A+ G +L ++D+ LL+E+ LVE V +G F+ ++L +P+E + LT+K NQK Sbjct: 238 QLTAAAAKAGPQLTPIQDEALLDEVTALVERPNVLLGQFEDEFLQVPQECLILTMKANQK 297 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + +G L+N F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 YFPLLSADGQLSNKFLIVSNISPDDA-SAVIGGNERVVRPRLADAKFFFDQDRK------ 350 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 K L+ R+A LD VV+H K+G+QG+R +R+ + I Q + D Sbjct: 351 --------------KTLESRLASLD--KVVYHNKLGSQGQRTTRVASIASAIGQQLGGDA 394 Query: 409 ALVDRAIVLSKA--DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A A DL T++V EFPELQG +G+ YA + + AIE+H KPR + Sbjct: 395 LASKAAQAARLAKADLVTDMVGEFPELQGIMGRYYAQHEGLDNDVAYAIEDHYKPRFAGD 454 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-- 524 +P N++ + V+LADKL+TL + I + PSG KDP+ALRR LG++R+++EN + + Sbjct: 455 ELPRNQVGVVVALADKLETLCGMFGIGQIPSGDKDPFALRRHALGVVRLLIENSLPLTLD 514 Query: 525 ---------LSQFIEDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +E+ + L F +DRL L ++ ++A+L E L I Sbjct: 515 TLLNTTFGCFAADVENASTALRSFIYDRLSGSLREQGYSAQEVDAVLALEPQQLADIAKR 574 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + E + KR+ IL +K ++ I+ L+ AE+ L ++ Sbjct: 575 LEAVKAFAALPEAESLAAANKRVGNIL---KKAEGDVQASINQALLVEPAEQALAQALAS 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y L ++ P++ FFD V+VN +D ++ NRL LL + + Sbjct: 632 VTPQADAAFAAGDYRSSLQALAALRTPVDAFFDGVMVNAEDPALKANRLGLLASLHQAMN 691 Query: 694 IVINVQKIV 702 V ++ ++ Sbjct: 692 RVADLSRLA 700 >gi|167568847|ref|ZP_02361721.1| glycyl-tRNA synthetase subunit beta [Burkholderia oklahomensis C6786] Length = 699 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 209/685 (30%), Positives = 335/685 (48%), Gaps = 65/685 (9%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGLQ----TIS 95 +Y TP RL + ++ + +PEK + E++ P A GK + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPEKQVREKVLPVSVALDAEGKPTAPLAKKLAALGRPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K D + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKADAFFVNYAAPGASLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + E+++ + I G+ T GHRF + + +Q Y L E+ Sbjct: 169 VRPVHRLTVL-----HDERVVPVSAFGIDAGDTTLGHRFLSDGLVAIQHASAYADTLREK 223 Query: 215 AMVLLDPECRRNAILN--DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYL 272 V+ R+ AI DAH A G E+V + LL+E+ LVEW V+ F+ ++L Sbjct: 224 GRVIAHFAGRKEAIRTQLDAH----AEGDEVVMPEALLDEVTSLVEWPVVYPCRFEDEFL 279 Query: 273 CLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLED 332 +P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL D Sbjct: 280 QVPQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLAD 338 Query: 333 ALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSR 392 A F+++D+ KPL R+ L +VV+H K+G+Q R+ R Sbjct: 339 AKFFFEQDKK--------------------KPLADRVPLL--ANVVYHNKLGSQLARIER 376 Query: 393 IRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCC 452 + L +IA I AD + RA L+KADL T++V EFPELQG +G YA E Sbjct: 377 LETLAGEIAPAIGADATIAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDVA 436 Query: 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 A EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG+ Sbjct: 437 IACTEHYQPRFSGDTLPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGV 496 Query: 513 IRIILENKIDIPLSQFI--------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIE 557 +R++LE ++ + L + E + I FF DRL+ L +R ++ Sbjct: 497 LRLLLEKQLPLDLVWLLRTAYERFAAVPGVAESTDAIYAFFIDRLRGLLRERGYSAGEVD 556 Query: 558 AILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ 617 A+L L IV + + EF + E + KRI IL +K + + P Sbjct: 557 AVLSLNPTRLDDIVARLDAVREFARLDESEALAAANKRISNIL---KKSESGANGAVQPA 613 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + AEK L+ +++ +Q ++ + Y L ++ P++ FF+ V+VN +D + Sbjct: 614 LFVEAAEKALHEQLAEVTPRVQSQLEARAYTGALSALAALRAPVDTFFNDVMVNAEDPAL 673 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R NRL+LL + + V ++ K+ Sbjct: 674 RANRLALLSALHQQMNCVADISKLA 698 >gi|209524276|ref|ZP_03272826.1| glycyl-tRNA synthetase, beta subunit [Arthrospira maxima CS-328] gi|209495367|gb|EDZ95672.1| glycyl-tRNA synthetase, beta subunit [Arthrospira maxima CS-328] Length = 713 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 208/710 (29%), Positives = 345/710 (48%), Gaps = 82/710 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A ++ LKE+ + ++++ Y TP RL + + GL Sbjct: 1 MPSFLLEVGTEELPATFVEGAIAQWEAMIPASLKEQYLTCESVKVYATPRRLAVVIAGLP 60 Query: 61 PHSPEKIEERLGPRVGA----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A GK KA +GF + + + D +I+ PK GD + + Sbjct: 61 QQQPDREEEIKGPPASAAFKDGKPTKAAEGFAKKQNI-NLEDIEIRPTPK-GDFVFVLKQ 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R ++L ++P I ++ + MRW + RP++ ++ +L ++ Sbjct: 119 IPGRKTSEILTELIPQWINRLEGKRFMRWGD-----GDIRFPRPIRWLVALL-----DKE 168 Query: 175 IIDLDLKEIPCGNIT-------YGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 I+ L IP G+ T GHR + + + Y L +A V +DP+ R+ A Sbjct: 169 ILPLS---IPNGSETISSDRHSQGHRVLHSNSVSIAEATDYAETLGKAFVEVDPQTRKTA 225 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I N A++VG E ++LL E++ LVEW +G+FD +L LP E+I++ + T+Q Sbjct: 226 IANQVKVAANSVGGEAEIPEELLNEVVNLVEWPTAVVGTFDADFLVLPPEVIKMVMVTHQ 285 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F G L FI +SN + A I GN RV+ ARL D F+K D Sbjct: 286 RYFPVLDTHGNLKPYFITISNGDPAKA-AIIASGNERVIRARLADGEFFYKTD------- 337 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-- 405 L KPL+ + D+ +V F +G+ ++V+RI +I + ++ Sbjct: 338 -------------LKKPLENYLP--DLENVTFQEDLGSVRDKVNRIIANADRIGKQLEVR 382 Query: 406 -ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 ++A + RA +L KADL +++V EFPEL+G +G++YA+ E + AI EH P+G Sbjct: 383 EGELAQIKRAALLCKADLVSQMVYEFPELEGIMGEKYALAGGEPEAIAKAIVEHYLPKGA 442 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +PTN IS V+LADKLDTL++ + + P+GS DP+ALRRA G++ II + + Sbjct: 443 SDRLPTNIISQVVALADKLDTLVSIFGLGMLPTGSSDPFALRRAANGVVNIIWSADLPLN 502 Query: 525 LSQFIED---------QNLIL--------FFHDRLKLYLHD-RDIRHDLIEAILRPEN-- 564 L + ++D N +L FF R++ L D + I +DL+ A+L E+ Sbjct: 503 LHELLKDLTTDFVNSHPNAMLGLIHHLEDFFLQRIRTLLQDEKAIDYDLVNAVLGDEDIE 562 Query: 565 ------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISP 616 +LL + D L E + + R ++ + E+ I+P Sbjct: 563 YKERALQDLLDVRDRALFLQEIRGDGTLDIIYETINRSTRLAKQGDLDTGELQPHAVINP 622 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 +E+ + D + Q +++ + Y Q+ L +I + FFD Sbjct: 623 SLFEKYSEQAFMEALEDLIPNTQAALETRNYRQLVTALAAIVPTVTQFFD 672 >gi|282934650|ref|ZP_06339893.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|281301225|gb|EFA93526.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] Length = 688 Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 215/731 (29%), Positives = 356/731 (48%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF+R G+ T I + KG Y V ++ Sbjct: 64 QADIDEIKKGPAKKIALDSEGNFTKAAQGFVRGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K +L D+L + + I+ + +P MRW + F ++RP+ ++ + +E K Sbjct: 121 KAGKLATDILLGMSDI-IKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSEVVPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF I S D Y L+ V+ D R+ I+N + Sbjct: 175 ILD-----ITAGRKTMGHRFLGDSVILANS-DDYEEALKGQFVIADAAERKTMIVNQIDQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 229 LVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 QDGKLINHFISVRN-GNKEFLENVISGNEKVLVARLDDAKFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ L D + Sbjct: 335 -------KYPLSHFVSRLD--KVSFHDKIGSMAEKLVRVRIIGEYLAKKFGLSDGVIKNF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT+ Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK----IDIPLSQ 527 ++ +S+ADK D +I F+A P+ S DPYALRR GI+RI+L ID L + Sbjct: 446 EVGALLSVADKFDNIITFFAAGMIPTSSNDPYALRRYAYGIVRILLNQNWSLAIDKALPE 505 Query: 528 FI----------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + ED+ + LF DR+K +L + ++D+I+A+L + I+ Sbjct: 506 MVELLDGKTKAKMPKTGQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQTDPSRIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S + + + S RI IL + K + + +E LY Sbjct: 566 AAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELY--- 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +++D+ + ++ + S+ + I+ +F+ ++ D V++NRL+ L I + Sbjct: 620 --LASQNLQAIDN--FTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINEL 675 Query: 692 ILIVINVQKIV 702 + + K+V Sbjct: 676 ATRLGALSKLV 686 >gi|157373155|ref|YP_001471755.1| glycyl-tRNA synthetase subunit beta [Shewanella sediminis HAW-EB3] gi|189082276|sp|A8FP54|SYGB_SHESH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157315529|gb|ABV34627.1| Glycine--tRNA ligase [Shewanella sediminis HAW-EB3] Length = 689 Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 212/716 (29%), Positives = 349/716 (48%), Gaps = 65/716 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE LK+ + +++ + P RL + + L+ Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLSNFTDELKKAELSFESAVWHAAPRRLAICVNQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAIAQAFDTDGNPTKAAMGWARGNGITVEQAGRLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIAAMAQRSLDKLPIPKPMRWGNNTT-----QFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ++ +L I GHRF ++ D+Y+ L E+ V + E R+ L A Sbjct: 173 VEGELLGQKSARIIRGHRFMGKASFELVHADNYLSALKEQGKVEANYEVRK--ALIKAGA 230 Query: 235 LASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+A + V D DLLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 231 EAAAAKIGGVADLEDDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPV 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L FI V+NI++ D I+ GN RVV RL DA F++ D+ + Sbjct: 291 FDKAGQLMPNFIFVTNIESKDP-QQIIAGNERVVRPRLADAEFFFETDKKD--------- 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L+ R+ L+ V+F ++GT +RV+RI + IA IDA+ Sbjct: 341 -----------SLESRLTSLET--VIFQKQLGTIKDRVARISDMAGFIANSIDANADEAA 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSK+DL T +V EF +LQG +G YA L E + A++E KP+ + VPT Sbjct: 388 RAGLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVALALQEQYKPKFSGDTVPTAP 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------S 526 +S+ V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RI +EN + + L + Sbjct: 448 VSVCVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRICVENNLPLNLIDLIAKA 507 Query: 527 QFIEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 Q + NL + FF R + + D+ + D+I A+L + IK + Sbjct: 508 QELHGSNLTNDKAAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTSPADFDSRIKAV 567 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + F S + + KR+ ILA K E+ I L+ AEK L +++ Sbjct: 568 SHFRSLEQASALAAANKRVSNILA---KVEGELPAAIDAGLLVENAEKVLAEKLNELQPQ 624 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y + LL + E ++ FF+ V+V DD +++NRL+LL ++ L Sbjct: 625 LAPLFAAANYQEALALLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFL 680 >gi|313682490|ref|YP_004060228.1| glycyl-tRNA synthetase beta chain [Sulfuricurvum kujiense DSM 16994] gi|313155350|gb|ADR34028.1| glycyl-tRNA synthetase beta chain [Sulfuricurvum kujiense DSM 16994] Length = 678 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 213/721 (29%), Positives = 364/721 (50%), Gaps = 72/721 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA K D+ + +L E+ + Y+TP RL L+ + Sbjct: 6 LIEIGVEELPAVPLLKELADIEKKWVAVL-EKNALLGEFEFYYTPRRLVLWHREFKTRQD 64 Query: 65 EKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PK 117 ++IEE G V G A GF + G++ Q+ + K G L + P Sbjct: 65 DRIEEFYGAPVDIAIKDGTPTPAALGFAKKCGVEF---NQLSRAEKGGKEVLYFSQNIPG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R ++L ++ I+ + + KSMRW + H S+IRP++ + L E+++D Sbjct: 122 RSSIEILGEMIDQWIKSLSFGKSMRWGSNHE-----SFIRPIRWVNVTL-----GEELVD 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++L + + TY HR KV S+ HY L+E V L P+ RR +IL + +L Sbjct: 172 MELFGVRSASETYVHRISHFEAKKVNSIHHYFDLLKEGSVDLYPQSRRESILANFAQLEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ + D+DLL E++ + E +GSFD+ +L LP E+I ++K +Q+ F +EG Sbjct: 232 ENGISIEVDEDLLNEVVAITEHPTPLLGSFDESFLELPPEVIITSMKEHQRYFPV-FKEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++VSN +D + +++GN RV+ RL DAL F++ D Sbjct: 291 KLINAFVVVSN-ALTDDFSKVIEGNERVLRPRLSDALFFYRND----------------- 332 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVDRAI 415 L + ++ + VVF +GT E++ R +V+ IA LI ++ A +DRA+ Sbjct: 333 -------LKKGLSTAGLEKVVFMNGLGTLAEKIKREKVVASTIANLIYDNINPAHLDRAM 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E+V EF ELQG +G YA+ EN AI+E P G +P+ +S Sbjct: 386 DLAKADLMSEMVYEFTELQGLMGYYYALALGENADVATAIKEQYLPTGEESALPSTMLSA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 V+++ K+DTLI ++I E P+GS+DP+ALRRA GII+I + ++I + S I DQ + Sbjct: 446 IVAMSMKVDTLIGMFSIGEIPTGSRDPFALRRAVNGIIKIAVTHQIPLNFSTLI-DQLVS 504 Query: 536 LF-----FHDRLKLYLHDR------DIRHDLIEAILRPENDNLLTIVDL---IKHLNEFF 581 ++ + ++ ++ +R + +I+A++ + + L I+++ I+ +N Sbjct: 505 IYPQGKEYKKNVETFVIERLAGAYVGVNPSIIQAVVAKDANVELDILEIDRKIRAVNTIA 564 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 SS + + KR+ IL E +++ +AE+ LY+ + E+ Sbjct: 565 SSDSFVEAFSTFKRVSNILKDEAMDK---GFKVNGTLFENDAERNLYSAAVSAISKSYET 621 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + D L ++ P++ FFD V+VN +D VR NR +L+ I I + +++ I Sbjct: 622 LEERL-----DALFALKAPLDTFFDNVMVNAEDLSVRANRKALVGMIYAEIYSIADIKNI 676 Query: 702 V 702 Sbjct: 677 T 677 >gi|256851184|ref|ZP_05556573.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260660608|ref|ZP_05861523.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 115-3-CHN] gi|297206049|ref|ZP_06923444.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] gi|256616246|gb|EEU21434.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260548330|gb|EEX24305.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 115-3-CHN] gi|297149175|gb|EFH29473.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] Length = 688 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 215/731 (29%), Positives = 356/731 (48%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF+R G+ T I + KG Y V ++ Sbjct: 64 QADIDEIKKGPAKKIALDSEGNFTKAAQGFVRGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K +L D+L + + I+ + +P MRW + F ++RP+ ++ + +E K Sbjct: 121 KAGKLATDILLGMSDI-IKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSEVVPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF I S D Y L+ V+ D R+ I+N + Sbjct: 175 ILD-----ITAGRKTMGHRFLGDSVILANS-DDYEEALKGQFVIADAAERKTMIVNQIDQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 229 LVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 QDGKLINHFISVRN-GNKEFLENVISGNEKVLVARLDDAKFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ L D + Sbjct: 335 -------KYPLSHFVSRLD--KVSFHDKIGSMAEKLVRVRIIGEYLAKKFGLSDGVIKNF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT+ Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK----IDIPLSQ 527 ++ +S+ADK D +I F+A P+ S DPYALRR GI+RI+L ID L + Sbjct: 446 EVGALLSVADKFDNIITFFAAGMIPTSSNDPYALRRYAYGIVRILLNQNWSLAIDKALPE 505 Query: 528 FI----------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + ED+ + LF DR+K +L + ++D+I+A+L + I+ Sbjct: 506 MVELLDGKTKAKMPKTGQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQKDPSRIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S + + + S RI IL + K + + +E LY Sbjct: 566 AAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELY--- 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +++D+ + ++ + S+ + I+ +F+ ++ D V++NRL+ L I + Sbjct: 620 --LASQNLQAIDN--FTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINEL 675 Query: 692 ILIVINVQKIV 702 + + K+V Sbjct: 676 ATRLGALSKLV 686 >gi|308188778|ref|YP_003932909.1| glycyl-tRNA synthetase, beta subunit [Pantoea vagans C9-1] gi|308059288|gb|ADO11460.1| Glycyl-tRNA synthetase, beta subunit [Pantoea vagans C9-1] Length = 689 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 205/718 (28%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + + + + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAEAFAAQVTAEMDAANLSHGEVSWFAAPRRLALKVANLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP V G KA +G+ R G+ ++ D + VY A ++ Sbjct: 66 PDREVEKRGPAVAAAFDADGNATKAAEGWARGNGITVDQAERLATDKGEWLVYRAQVKG- 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++ A+ K+P PK MRW S ++RP+ ++ +L +++I Sbjct: 125 -EAAQALLPAMIATALSKLPVPKLMRWGD-----SDVQFVRPVHTVTMLL-----GDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF I + + D Y LE+ V+ D + R+ I DA Sbjct: 174 PGTILGIKSDRVIRGHRFMGESEITLDNADQYPDVLEKRGQVIADYQVRKAMIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 234 ARRLGGNADISDSLLEEVTSLVEWPVVLTATFEEKFLKVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++SD I+ GN +VV RL DA F Sbjct: 294 DGNLMPNFIFVTNIESSDP-RQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQKELGTLRDKTDRIQTLAGWIAGEIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSSPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D ++A+L +K ++ F Sbjct: 511 YGSKLSNARVVDDVIDFMLGRFRTWYQEEGHSIDTLQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L E +L ++ + +Q Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSTETLNESVQASLLKENEEIQLATFVTALSSKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + ++ FFD+V+VN DD+ VR NRL+LL ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAQLRTAVDNFFDKVMVNADDQAVRVNRLTLLSKLRELFLQVADI 685 >gi|240112074|ref|ZP_04726564.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] gi|268598133|ref|ZP_06132300.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] gi|268582264|gb|EEZ46940.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] Length = 687 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 343/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGRQ-DVYAYEYVQTGKPLGGLLENIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|167561612|ref|ZP_02354528.1| glycyl-tRNA synthetase subunit beta [Burkholderia oklahomensis EO147] Length = 699 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 209/685 (30%), Positives = 335/685 (48%), Gaps = 65/685 (9%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGLQ----TIS 95 +Y TP RL + ++ + +PEK + E++ P A GK + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPEKQVREKVLPVSVALDAEGKPTAPLAKKLAALGRPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K D + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKADAFFVNYAAPGASLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + E+++ + I G+ T GHRF + + +Q Y L E+ Sbjct: 169 VRPVHRLTVL-----HDERVVPVSAFGIDAGDTTLGHRFLSDGLVAIQHASAYADTLREK 223 Query: 215 AMVLLDPECRRNAILN--DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYL 272 V+ R+ AI DAH A G E+V + LL+E+ LVEW V+ F+ ++L Sbjct: 224 GRVIAHFAGRKEAIRTQLDAH----AEGDEVVMPEALLDEVTSLVEWPVVYPCRFEDEFL 279 Query: 273 CLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLED 332 +P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL D Sbjct: 280 QVPQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLAD 338 Query: 333 ALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSR 392 A F+++D+ KPL R+ L +VV+H K+G+Q R+ R Sbjct: 339 AKFFFEQDKK--------------------KPLADRVPLL--ANVVYHNKLGSQLARIER 376 Query: 393 IRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCC 452 + L +IA I AD + RA L+KADL T++V EFPELQG +G YA E Sbjct: 377 LETLAGEIAPAIGADATIAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDVA 436 Query: 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 A EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG+ Sbjct: 437 IACTEHYQPRFSGDTLPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGV 496 Query: 513 IRIILENKIDIPLSQFI--------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIE 557 +R++LE ++ + L + E + I FF DRL+ L +R ++ Sbjct: 497 LRLLLEKQLPLDLVWLLRTAYERFAAVPGVAESTDAIYAFFIDRLRGLLRERGYSAGEVD 556 Query: 558 AILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ 617 A+L L IV + + EF + E + KRI IL +K + + P Sbjct: 557 AVLSLNPTRLDDIVARLDAVREFARLDESEALAAANKRISNIL---KKSESGANGAVQPA 613 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + AEK L+ +++ +Q ++ + Y L ++ P++ FF+ V+VN +D + Sbjct: 614 LFVEVAEKALHEQLAEVTPRVQSQLEARAYTGALSALAALRAPVDTFFNDVMVNAEDPAL 673 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R NRL+LL + + V ++ K+ Sbjct: 674 RANRLALLSALHQQMNCVADISKLA 698 >gi|299822896|ref|ZP_07054782.1| glycyl-tRNA synthetase beta subunit [Listeria grayi DSM 20601] gi|299816425|gb|EFI83663.1| glycyl-tRNA synthetase beta subunit [Listeria grayi DSM 20601] Length = 689 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 224/724 (30%), Positives = 353/724 (48%), Gaps = 84/724 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + L E + Y+N+ Y TP RL L +K ++ Sbjct: 4 DFLLEIGLEEMPAKYVTSSVRQLKERVADWLLENKISYENIETYATPRRLALIVKAMADK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++IEE GP G KA GF RS Q + ++ KG YL V ++ Sbjct: 64 QEDRIEEAKGPAKKIALDENGDWSKAALGFARS---QQVDPSELGFQAFKGVDYLFVKKE 120 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L I I + +P SM W + +IRP+K ++ + + Sbjct: 121 VPGQPTISLLPEI-KACITAMNFPVSMHWGSNE-----MRFIRPIKWLIALF-----DKD 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ + G +T GHRF ++ Y L E V+ + E R+ AI H Sbjct: 170 VIPFEIAGVSTGKVTRGHRFLGKEA-EINEPSEYTARLLEQFVVANSEERKAAIREQLHE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++ D+ LLEE+ LVE+ V G F++KYL LPEE++ T+K +Q+ F + Sbjct: 229 IELVENWKIEIDETLLEEVNNLVEYPTVLTGDFEEKYLTLPEEILITTMKEHQRYFPAFS 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI V N + + +GN +V+ ARL DA F+ L LK+S Sbjct: 289 QDGTLLPHFITVRN-GNEEHLEIVAKGNEKVLRARLSDAEFFY---------LDDLKQS- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 +D +A+L ++VFH K+GT E++ R+ +K+A L+ +AL Sbjct: 338 ----------IDDCVAKLR--NIVFHEKLGTLTEKMKRV----EKVASLLADQLALSTEK 381 Query: 412 -DRAIVLS---KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 D+ I L+ K DL T IV EFPELQG +G++YA+LQ E AI EH P Sbjct: 382 KDKLIHLAAIYKFDLVTHIVDEFPELQGLMGEKYALLQGEEADVAAAIREHYLPISAEGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P ++ +++ADKL+TLI F+A+ P+GS+DP++LRR LGI+RI+ NK +I L Sbjct: 442 LPQTELGSILAIADKLETLIAFFAVGIVPTGSQDPFSLRRNALGIMRIMKANKWNIRLLP 501 Query: 528 FIED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 I + Q +I F RLK + IR+D+I+A+L DN+ Sbjct: 502 LIREVIKIEQAELDQSLSVEELQQEIIQFLKQRLKAIMLGEAIRYDIIDAVLDSTQDNVP 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +++ LN + S F + + + +++ + +K +E+ I P + EK L+ Sbjct: 562 ELLERASVLNNY--STDSGNFRETIESLSRVVNLAKKHEKEVV--IDPALFENQEEKTLF 617 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + Q R L ++ IE +FD++LV D VR+NRL LL + Sbjct: 618 EALESLKQNFQSLPVAARLES----LIALKPAIEAYFDKILVMSGDDAVRNNRLELLFEL 673 Query: 689 KNII 692 N I Sbjct: 674 SNFI 677 >gi|59802450|ref|YP_209162.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA 1090] gi|81311133|sp|Q5F4Y7|SYGB_NEIG1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|59719345|gb|AAW90750.1| putative glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae FA 1090] Length = 687 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 213/673 (31%), Positives = 347/673 (51%), Gaps = 60/673 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + R + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGRQ-DVYAYEYVQTGRPLGGLLENIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 Query: 686 QYIKNIILIVINV 698 + + V ++ Sbjct: 670 NRLAGQMNAVADI 682 >gi|312880033|ref|ZP_07739833.1| glycyl-tRNA synthetase beta chain [Aminomonas paucivorans DSM 12260] gi|310783324|gb|EFQ23722.1| glycyl-tRNA synthetase beta chain [Aminomonas paucivorans DSM 12260] Length = 694 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 209/712 (29%), Positives = 344/712 (48%), Gaps = 63/712 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA E++ + L+ + + + Y TP RL LY++ L+ Sbjct: 9 DLLFEIGTEEIPAGFLSWGLEEIRRLGEEELQAARIPHGGILSYGTPRRLTLYVRSLASR 68 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-LAVLR 114 + +E GP G KA GF RS + + D Q+++ G Y AVL+ Sbjct: 69 QEDLVETVKGPLWAQAFDPNGHPTKAAAGFARSRQI-PVEDLQMRE--VDGVPYAFAVLK 125 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + E ++ ++ ++++ +PK+M W P F+ RP++ ++ + ++ Sbjct: 126 QEGQETESLIPEVLQRILKRLVFPKNMYW---QDPTVRFA--RPIRWLVALW-----GDQ 175 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + L E+ T GHRF ++++ Y+ L + VL DP+ RR +L+ Sbjct: 176 IVPVTLGEVHSDRFTRGHRFLGKRNLEIREAKDYLEALFDEFVLADPQKRREKMLSGIAS 235 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L +G D DL+EE + LVE+ F GSFD +L +P E++ T+K +Q+ F R Sbjct: 236 LEKDMGAGADLDPDLVEENLNLVEYPVPFFGSFDPSFLDIPSEVLVTTMKKHQRYFPVRD 295 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 R G L F+ VSN QA+ + +GN RV+ ARL DA FW DQ LSS E Sbjct: 296 RSGKLCPFFVGVSNNQATRM-QVVREGNERVLRARLSDAAFFWAEDQKA--GLSSRVEG- 351 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVD 412 + V++ ++G+ ++ R R L + + + +LVD Sbjct: 352 -------------------LKTVLYQERLGSVHQKSERARTLAIWLVESLGLGEIRSLVD 392 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+KADL T +V EFPELQG +G+EYA + E A+ E PR + +PT+ Sbjct: 393 RAAFLAKADLLTNMVYEFPELQGVMGREYARREGEPDRVALALHEQYLPRFAGDRLPTDA 452 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + V LAD+ DTL+ + +P+GS+DPY LRRA+ I I+ ++D+P+ Sbjct: 453 VGALVGLADRADTLVAIHHVGLEPTGSQDPYGLRRASRCIDEILWGLELDVPVVDLFAKA 512 Query: 533 NLIL------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 L FF R + L ++ H ++ L+ L + L++ L E Sbjct: 513 GANLGASPETLQAVGDFFQQRQLVQLREKGYGHGMVSLALQCVGHRPLQTLRLLQVLEEL 572 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 A + +A R+ ILA + ++ P L +AE+ L A +++ G ++E Sbjct: 573 KGEAWFASLVTAAVRVRNILAKTPEGG-----DLDPSTLTCDAERGLLAALTECGPLVRE 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + ++ LL + P+ FFD VLV D +VR NRL LL+ +++ Sbjct: 628 AVARYEWREVAQLLLRLEGPVTRFFDDVLVMDPDEKVRTNRLGLLRRAQDLF 679 >gi|149912060|ref|ZP_01900651.1| glycyl-tRNA synthetase beta subunit [Moritella sp. PE36] gi|149804856|gb|EDM64893.1| glycyl-tRNA synthetase beta subunit [Moritella sp. PE36] Length = 690 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 214/719 (29%), Positives = 341/719 (47%), Gaps = 61/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + AE + LK+ G+ + ++ P RL L + L+ Sbjct: 5 NLLIEIGTEELPPKSLRTLAEAFAANFQAELKKAGLEFADVSWMAAPRRLALTVTALADS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ +IK D KG+ L Sbjct: 65 QADKVIEKRGPAISVAFDADGNATKAAQGWARGNGITVEQAGRIKTD--KGEWLLHKSEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ +V A+ K+P K MRW + SPI +IRP+ ++ + E +I Sbjct: 123 KGQATQVLVADMVATALAKLPVSKPMRWGS--SPIQ---FIRPVHTVTMLFGDEALAGEI 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + I GHRF ++ D+Y+ LE+ MV++D R+ I Sbjct: 178 LG-----IKAARTIRGHRFLGKGDFELPHADNYVDLLEDHGMVMVDYARRKEVIRQQVIA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A G D+ LLEE+ LVEW +G+F+++YL +P E + T+K NQK F + Sbjct: 233 AAEEHGGVAEIDEALLEEVTSLVEWPVTLVGNFEERYLDVPAEALIYTMKDNQKYFPMLS 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI + D +++GN +VV RL DA F Sbjct: 293 KDGELLPKFIFVSNIISKDV-RQVIEGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D + L+ R+A D+ V+F ++GT E+ RI L IA I A+ RA Sbjct: 334 --FNTDKKRTLESRLA--DLETVIFQKQLGTLKEKSQRISDLAAAIAGKISANTEHAQRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+KADL +++V EFP++QG +G YA E A+ E PR + +P + ++ Sbjct: 390 GLLAKADLMSDMVVEFPDVQGVMGMHYARNDGEAEEVAIALNEQYMPRYAGDRLPESLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 +V+LADKLDTL+ + I + P G KDP+ALRRA +G +RII+E + + L ++ Sbjct: 450 CSVALADKLDTLVGIFGIGQIPKGDKDPFALRRAAIGTLRIIIEKDLPLDLVDLVDTAKL 509 Query: 531 -------DQN----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN ++ F R + D I D+I+A+L +K +N Sbjct: 510 LFGDKLSNQNVSTDVVAFILGRFPAWYKDAGISVDVIQAVLARRPTKPADFDKRVKAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + KR+ ILA K E++ + L +AEK L A + + Sbjct: 570 FRGLDAAATLAAANKRVGNILA---KFEGELNTTVDTSLLQEDAEKALAAAVDAKVELLT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y Q L + + ++ FFD V+V DD ++ NRL+LL ++N L V ++ Sbjct: 627 PLFAAGDYQQALTELSELRDVVDTFFDNVMVMADDEALKINRLTLLNTLRNQFLNVADI 685 >gi|296100579|ref|YP_003610725.1| glycyl-tRNA synthetase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055038|gb|ADF59776.1| glycyl-tRNA synthetase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 689 Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 204/718 (28%), Positives = 337/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVANLAASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 PDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGE 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L ++ ++ K+P PK MRW S ++RP+ ++ +L + +I Sbjct: 126 R--AEALLPNMIATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDTVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + + + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGVASDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + ++ ++ L E L + ++ Sbjct: 571 RTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALAMQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + + I+ FF++V+VNV+D+++R NRLS+L+ ++ + L V ++ Sbjct: 628 YFAEGRYQEALVELAELRDVIDAFFEKVMVNVEDKDLRINRLSMLEKLRELFLRVADI 685 >gi|240015731|ref|ZP_04722271.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA6140] Length = 687 Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 213/673 (31%), Positives = 348/673 (51%), Gaps = 60/673 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + R + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGRQ-DVYAYEYVQTGRPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + + +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 Query: 686 QYIKNIILIVINV 698 + + V ++ Sbjct: 670 NRLAGQMNAVADI 682 >gi|315222123|ref|ZP_07864032.1| glycyl-tRNA synthetase, beta subunit [Streptococcus anginosus F0211] gi|315188749|gb|EFU22455.1| glycyl-tRNA synthetase, beta subunit [Streptococcus anginosus F0211] Length = 679 Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 205/706 (29%), Positives = 350/706 (49%), Gaps = 88/706 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L + + + + + TP RL + + LS Sbjct: 4 NLLVELGLEEMPAYVVTPSMKQLRDKMAAFLTDNRLTFDKIEMFSTPRRLAVRVSNLSEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP G KA GF+R GL T+ D + KG+ Y+ V ++ Sbjct: 64 QTDLTEDFKGPSKKIALDAEGNFTKAAQGFVRGKGL-TVEDITFRD--IKGEEYVYVTKQ 120 Query: 116 P-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +E+++ +V V + + +P +M W + + F +IRP+ ++ +L E Sbjct: 121 EIGKPVEELIDGVVDV-LTSLSFPVNMHWGS-----NTFEYIRPVHTLTVLLDDES---- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++L +I G + GHRF H +K+QS D Y DL + V+ P R N IL+ Sbjct: 171 -FLMNLFDIESGRTSRGHRFLG-HEVKIQSADSYEEDLRKVFVIASPMERENMILDQIKE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + + D+DLL+E++ L+E+ F+G FD++YL +PEE++ ++K NQ+ FV R Sbjct: 229 IEKMHNVHVEIDEDLLDEVLNLIEYPTAFIGRFDERYLDVPEEVLVTSMKVNQRYFVVRN 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L F+ V N A + +V+GN +V+ ARLEDA FW+ DQ + +S L E Sbjct: 289 ENGKLLPYFVSVRNGNA-EHLENVVKGNQKVLVARLEDAEFFWREDQRLV--ISDLVEK- 344 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQLIDADVALV 411 + +V FH KIG+ E R ++I L + AQL ++ V Sbjct: 345 -------------------LKNVTFHEKIGSLAEHMERTAKIAALLAEKAQLSKQEMKDV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 386 ARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENTAVAKAIREHYLPTASDGELPDT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 KI +++ADK+DT+++F+++ PSGS DPYALRRAT G++RI+ + I L + IE+ Sbjct: 446 KIGAILAIADKMDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWHIALDELIEE 505 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ FF R++ + D D+ D++ ++L N + + DL++ Sbjct: 506 IYALQFDSLTYSNKEQVLDFFRARIE-KMMDSDVPKDIVSSVL---NSSTFVVRDLVEAA 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS----- 632 + A+ + F S + + ++ + EK E + + EK L+A + Sbjct: 562 SLLAEKAQEDSFKSSVESLARVFNLAEKA--ETAGVVDESLFENAEEKALHAAVENLTLS 619 Query: 633 -DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 D +I++ L ++ I+ FFD +V +D + Sbjct: 620 DDLADNIEQ-------------LFALSPVIDAFFDNTMVMAEDEAI 652 >gi|240127362|ref|ZP_04740023.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268685735|ref|ZP_06152597.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268626019|gb|EEZ58419.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] Length = 687 Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 214/673 (31%), Positives = 345/673 (51%), Gaps = 60/673 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + R + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGRQ-DVYAYEYVQTGRPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 Query: 686 QYIKNIILIVINV 698 + + V ++ Sbjct: 670 NRLAGQMNAVADI 682 >gi|325912694|ref|ZP_08175077.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 60-B] gi|325478115|gb|EGC81244.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 60-B] Length = 689 Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 361/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I + +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGLLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S RI IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|218960932|ref|YP_001740707.1| putative glycine tRNA synthetase, beta subunit [Candidatus Cloacamonas acidaminovorans] gi|167729589|emb|CAO80501.1| putative glycine tRNA synthetase, beta subunit [Candidatus Cloacamonas acidaminovorans] Length = 698 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 219/728 (30%), Positives = 344/728 (47%), Gaps = 69/728 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ EE+P R A +S LK + + + TP R++L L H Sbjct: 6 FLLELGCEELPERQIEIACNGVSSSFGTFLKSNKLYCGSYKVSGTPRRIYLDALELDTHQ 65 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIK------KDPKKGDVYLAVLRKPK 117 ++ + GP V +G L G ++ Q K ++ +KG +LAV K Sbjct: 66 EDEEILKTGPLVSVAYDE-EGNLTPAGKGFLNRSQAKEAAIFIQETEKGK-FLAVKYIKK 123 Query: 118 RLIE-DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 L ++LK+ +P I ++P+ K M WS S RPL+ L + + + Sbjct: 124 GLATVELLKSWIPEMIVQIPFEKKMAWSQLGLIFS-----RPLRWFLILW-----NNRPL 173 Query: 177 DLDLKEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +LD IPCGNITYG+RF I + + Y+ L E V++D E RR I+ + Sbjct: 174 ELDFGGIPCGNITYGNRFLGLEKSITINKAEDYLPKLLEQKVIVDIEERRKEIITQLAAI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +++ED++L+E ++ LVE+ +G F++KYL LP+++I TI QK F + Sbjct: 234 FPEDNFKVIEDRELVETVVNLVEYPTAVVGEFEEKYLSLPDKIIISTISQAQKYFAVQDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L+N F+ +SN S I +GN +VV ARL DAL +W Sbjct: 294 QGKLSNKFVFISNGNPS-ASMIIRKGNEKVVKARLADALWYW------------------ 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVD 412 N D PL+ LD V+F AK+GT ++ RI L +A ++ + Sbjct: 335 --NEDTKYPLEHWTRHLD--KVIFQAKLGTMADKTKRIMQLVSALADELKITEEQKKKAI 390 Query: 413 RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 R L KADL T ++ +EF +LQG IGK+YA+ E+ + I EH PRG + +P+ Sbjct: 391 RCAELCKADLVTNMLGEKEFTKLQGYIGKQYAIASGEDREIAEGIFEHYLPRGSGDELPS 450 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 V++ADK+DT+ I P+GS DP+ALRRA G+++II K D+ L F + Sbjct: 451 TLCGAIVAIADKMDTVAGIIGIGMMPTGSGDPFALRRAANGVVQIISSRKWDLDLFSFAD 510 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +NL F R+ L I +D+IE+++ + +L + + Sbjct: 511 RALELIGKQTELDKKAKKNLHSFLEQRITGLLKTNGIAYDVIESVMHIDKSHLHDLENRA 570 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + LN ++ KR+ I+A + + + L+ E LY + Sbjct: 571 QALNALKGKEDFIHLVIGFKRVANIIA-----ETQDFVPFNKDKLVEPEEINLYEALQTL 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I ++ +K Y L + I+ FFD VLVN +D E+R+NR SLL+ +K L Sbjct: 626 HQDIDSALQNKDYPLALQYLIKFGKVIDAFFDAVLVNCEDDELRNNRHSLLKEVKKEFLR 685 Query: 695 VINVQKIV 702 V ++ IV Sbjct: 686 VADLSLIV 693 >gi|221135260|ref|ZP_03561563.1| glycyl-tRNA synthetase subunit beta [Glaciecola sp. HTCC2999] Length = 689 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 194/699 (27%), Positives = 335/699 (47%), Gaps = 60/699 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+E+ +EE+P + + L + + Y ++ +P RL + + GL+ Sbjct: 6 LLIELGTEELPPKSLKTLGTAFGTNIQKELDDSQLAYSEVKWLASPRRLAVLVSGLAYQQ 65 Query: 64 PEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V A KA G+ R G+ ++ D KG+ L + Sbjct: 66 ADSVVEKRGPAVSAAFDAEGNPTKASMGWARGNGIDVADAERLVTD--KGEWLLYKAQVT 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++ +++ IV ++ K+P PK MRW ++ + +IRP+ + + +KI+ Sbjct: 124 GQALDGLIEGIVSRSVTKLPIPKMMRWGSSDT-----QFIRPVHTFTAMY-----GDKIL 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + ++P N+ GHRFH P ++ D Y+ + V++D R I ++ A Sbjct: 174 PATILDMPSNNVIQGHRFHGPATFTLEHADQYVEMCRKHFVVVDYAEREAQIAAGLNKQA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +GLE ++ LLEEI LVE+ V SF++++L +P+E + T+K +QK + Sbjct: 234 DTLGLEADYNQALLEEIASLVEFPVVLQASFEERFLAVPKEALIYTMKDDQKYVPLLDGQ 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L++ F+ VSNIQ+S +++GN +V+ RL DA F Sbjct: 294 GQLSSTFLFVSNIQSS-APQHVIEGNEKVIRPRLADAEFF-------------------- 332 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 FN D L R+ L ++F ++GT E+ RI + IA I+A+ RA + Sbjct: 333 FNTDKKHSLASRLESLQ--SILFQKQLGTLAEKARRIEHVAAHIAVAINANAEHAARAGL 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+K DL TE+V EFP++QG +GK YA+ E+ S AI E PR +N+P++ +S Sbjct: 391 LAKTDLMTEMVMEFPDVQGVMGKYYALHDGEHESVAQAIAEQYMPRQSGDNLPSSDVSAA 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LADKLDTL + I P G KDP+ALRRA++G++RII E D+ + + + Sbjct: 451 VALADKLDTLAGIFGIGMLPKGDKDPFALRRASIGVLRIISERSYDLDVRELLSVAVEAY 510 Query: 531 -DQ--------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 D+ N F R + D+ I D+I+A+ + + F Sbjct: 511 GDKLSNADTLDNATDFVLARFRAMYQDQGIDTDVIQAVNARNVSKPTDFAARVHAVAAFK 570 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA K N +++++ L E+ L+ I+ + + Sbjct: 571 ALPQALALAAANKRVANILA---KNNVADAVDVNESLLNETQERDLFEQITQQQATVNHA 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 ++ Y + L ++ ++ FFD ++V DD +R N Sbjct: 628 LNTNDYTTVLSSLATLQPVVDAFFDNIMVMSDDSALRQN 666 >gi|17545243|ref|NP_518645.1| glycyl-tRNA synthetase subunit beta [Ralstonia solanacearum GMI1000] gi|25009329|sp|Q8Y213|SYGB_RALSO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|17427534|emb|CAD14052.1| probable glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum GMI1000] Length = 697 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 211/701 (30%), Positives = 349/701 (49%), Gaps = 70/701 (9%) Query: 31 GLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERL----------GPRVGAGK 79 GLL EEG + + TP RL + G+ +P++ + E++ G Sbjct: 37 GLL-EEGA---QVEGFATPRRLAASITGVRRAAPDRELREKVLPVNIAFDAEGKPTAPLT 92 Query: 80 KAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWP 138 K + +S G TI+ +++ P K + ++ D L+ + I +P P Sbjct: 93 KKLAALAKSIGADTIAPESLERAPDGKAESLFHRYTARGAVLADGLQAALSQTIAGLPIP 152 Query: 139 KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 K M + + ++RP ++ +L ++II + + GN+T GHRF + Sbjct: 153 KVMIYQRPNG--DNVQFVRPAHRLIALL-----DDEIIPAGVLGLQSGNVTLGHRFLSAG 205 Query: 199 PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV 257 I + Y L+ + V+ R+ AI A L +A +V + LL+E+ LV Sbjct: 206 EIIIPHATAYASTLKSQGKVIAGYAERKEAI--RAELLKAAGADTVVMPEALLDEVNALV 263 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAA 317 EW V+ F++++L +P+E + LT++TNQK F +G L N F++VSN+ A++ A Sbjct: 264 EWPVVYPCHFEEQFLAVPQECLILTMQTNQKYFALTDAQGHLRNRFLIVSNL-ATETPQA 322 Query: 318 IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 I++GN RVV RL DA F++ D+ KPL R+ +L V Sbjct: 323 IIEGNERVVRPRLADARFFFEHDKK--------------------KPLADRVPQLAR--V 360 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 V+H KIGTQ ERVSR++ + ++A+ + A+VA RA +L+KADL T++V EFPELQG + Sbjct: 361 VYHNKIGTQLERVSRLQAIAGQLAEKLGAEVAHASRAALLAKADLLTDMVGEFPELQGTM 420 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA E A EH +PR + +P V+LADKL+TL+ W I P+ Sbjct: 421 GTYYARHDGEAEDVALACSEHYQPRFAGDALPGTATGTVVALADKLETLVGIWGIGLAPT 480 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL---------------FFHDRL 542 G KDP+ALRR LGI+R+++E + + +++ +E F +DRL Sbjct: 481 GEKDPFALRRHALGILRMLIEKPLALGIAEVLEAAAASFEGIAAVKPDLAAITDFLYDRL 540 Query: 543 KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 + YL D+ + +EA++ L IV ++ + F + + E + KRI IL Sbjct: 541 RGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAALPQAEALAAANKRITNIL-- 598 Query: 603 EEKKNREISL-EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 K +I++ + PQ L +AE+ L+ ++ H+ ++ + L S+ E + Sbjct: 599 ---KKTDITIGSVQPQLLREDAERALHQAVATSEPHVHDAFARGDFTTALKTLASLREAV 655 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 656 DSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696 >gi|240122659|ref|ZP_04735615.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] gi|268681258|ref|ZP_06148120.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] gi|268621542|gb|EEZ53942.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] Length = 687 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 341/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + R + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGRQ-DVYAYEYVQTGRPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q ++ + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQ-TENPSHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAGRAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 +L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 SLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|259500589|ref|ZP_05743491.1| glycyl-tRNA synthetase [Lactobacillus iners DSM 13335] gi|302191280|ref|ZP_07267534.1| glycyl-tRNA synthetase subunit beta [Lactobacillus iners AB-1] gi|259167973|gb|EEW52468.1| glycyl-tRNA synthetase [Lactobacillus iners DSM 13335] Length = 689 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 218/731 (29%), Positives = 360/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGNFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW +IRP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFIRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S RI IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|217964396|ref|YP_002350074.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes HCC23] gi|254781854|sp|B8DE53|SYGB_LISMH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|217333666|gb|ACK39460.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes HCC23] gi|307571039|emb|CAR84218.1| glyS [Listeria monocytogenes L99] Length = 688 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 350/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++G++ Sbjct: 4 DFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGMAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q + + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDDEGNWSKAALGFAKS---QKVDPADLTFRDIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVP---VAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + T++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSTLLPNLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVTTSNTSRGHRFLGKSATIKQPSD-YPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQAGELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSAELPGADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE A+ E F + + + +++ I K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNE---HAEAEWFRPTIEALSRVVKI--AKKYEDGVEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIERLKAFADLRTT----IDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|322421192|ref|YP_004200415.1| glycyl-tRNA synthetase subunit beta [Geobacter sp. M18] gi|320127579|gb|ADW15139.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. M18] Length = 687 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 206/715 (28%), Positives = 344/715 (48%), Gaps = 67/715 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LEI EEIPA KA D+ +++ L+ + + + TP RL L +KGL+ Sbjct: 4 DLFLEIGCEEIPAGFVPKAMADMELLMKRELETARIEFGEIVTLGTPRRLVLAVKGLAAR 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ +GP A +A GF R G++ ++D ++ PK G+ AV + Sbjct: 64 QPDAELTAMGPAKSAAYDADGNPTRAAQGFARGQGVE-VADLKVVMTPK-GEYLAAVKSE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R ++L ++P I +P+ KSMRW+ + RP+ I+ + + Sbjct: 122 VGRDTSELLPEMLPRLIGAIPFKKSMRWADFE-----VRFARPIHWIVALF-----DGTV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + I G+ + GHRF A V+ L HY+ + E V+ DPE R+ I + R+ Sbjct: 172 VPFSFGNIESGSASRGHRFMANTTFPVRDLAHYLEECERHFVIPDPEKRKAIIRQEIDRV 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++ D+ LLE++ LVE+ G+F +L +P E++ +++ +Q+ F Sbjct: 232 ARQAKANVLPDESLLEQVSFLVEYPSAVHGTFSPDFLVVPREVLITSMREHQRYFSLVDD 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI ++N D +V+GN RV+ ARL DA F+ D+++ L + ES Sbjct: 292 QGKLLPGFITINNTLTEDP-QVVVKGNERVLRARLSDARFFF--DEDHKVKLETRVES-- 346 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDRA 414 + VV+ AK+GT E++ R R L K +AQ +A V RA Sbjct: 347 ------------------LKSVVYQAKLGTSYEKMERFRELAKGLAQRHNAAVTEKAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL + +V EFPE+QG +G+EYA+ E+ + +AI EH P +P + I Sbjct: 389 ATLCKADLVSGMVGEFPEVQGIMGREYALHDGEDAAVANAIAEHYLPTQAGGELPASDIG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 VSLADK+DT+ +++ P+GS DPYALRR+ LGII IIL+ P+S ++ Sbjct: 449 AFVSLADKMDTICGCFSVGLIPTGSADPYALRRSALGIINIILDKGYREPISGLVKASLG 508 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++++ FF R + DR D+++A++ D+L+ I+ L Sbjct: 509 LLEQKATRPVDEVQKDVLEFFRGRFVNLMADR-YPSDVVDAVVSVSFDDLVEAAAKIRAL 567 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 EF ++ KR+ I+ + ++ + AE L+ + Sbjct: 568 AEFRKRDDFGALAVAFKRVCNIV------KEGVETPVAAELFQEPAEGGLFEAQNQVKGK 621 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 +++++ Y + ++ +++FFD+V+V +D VR NRL+LL I + Sbjct: 622 VEKALSGADYLCALTEIATLKPAVDLFFDKVMVMAEDERVRQNRLALLTSIARLF 676 >gi|330447264|ref|ZP_08310914.1| glycyl-tRNA synthetase, &beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491455|dbj|GAA05411.1| glycyl-tRNA synthetase, &beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 689 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 209/699 (29%), Positives = 332/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + LK + + ++ Y P RL L + GL+ + Sbjct: 5 NFLIELGTEELPPKALRTLAEAFAANFEAELKAADLPHDGIKWYAAPRRLALKVTGLAEN 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K+ E+ GP + G KA G+ R G+ ++ D KG+ L Sbjct: 65 QPDKVVEKRGPAIASAFDADGNPTKAAQGWARGNGITVDQAERMVTD--KGEWLLFKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L + A+ K+P P+ MRW + +IRP+K++ +L +++ Sbjct: 123 KGQPAQTLLPELAAAALAKLPIPRPMRWGDKDT-----QFIRPVKTLTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ++ + + GHRF + + D Y LEE V+ D E R+ I+ DA + Sbjct: 173 VEGTILGVASARTIRGHRFMGEAEFTIDNADQYPAILEERGKVMADYEARKAIIVADAQK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A AVG + DL+EE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAQAVGGTADLEDDLVEEVTSLVEWPVVLTASFEEKFLKVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI VSNI ++D + I+ GN +VV RL DA F Sbjct: 293 AEGKLVPKFIFVSNIISNDP-SQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL L R+ +L+ +F ++GT ++ RI L IA I ADV RA Sbjct: 334 --FNTDLKSKLIDRLPQLET--AIFQKQLGTIKDKTDRITELAGYIADKIGADVDNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEQEDVALALNEQYMPRFAGDQLPSTPVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN D+ L + Sbjct: 450 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYDLDLVDLVAKAHS 508 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 D ++I F R + + D D+I+A+L +K ++ Sbjct: 509 LFGDKLTNNNVDSDVIEFMLGRFRAWYQDAGFSIDVIQAVLAMHPTQPADFDKRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E+ + L+ AEK L ++ + ++ Sbjct: 569 FRELDAAESLAAANKRVGNILA---KFDGELPTTVDNSLLVEAAEKELAEKVTAVVSALE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 Y L S+ EP++ FFD V+V DD +++ Sbjct: 626 PVFAAGDYQTALTELASLREPVDAFFDNVMVMADDEKLK 664 >gi|323493788|ref|ZP_08098906.1| glycyl-tRNA synthetase subunit beta [Vibrio brasiliensis LMG 20546] gi|323311922|gb|EGA65068.1| glycyl-tRNA synthetase subunit beta [Vibrio brasiliensis LMG 20546] Length = 688 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 207/699 (29%), Positives = 334/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK+ + +Q ++ Y P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKDADLAHQGVKWYAAPRRLALKVAALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 64 QADKVVEKRGPAVSVAFDAEGNATKAAQGWARGNGITVEQAERLKTD--KGEWLLCKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQATSEIVVDLAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++S + Y LEE V+ D E R+ IL D+ + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILADSQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ IDADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITALSGYIAKQIDADVEKATRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYANHDGEDEQVALALYEQYMPRFAGDDLPSTGIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L I Sbjct: 449 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLVDLIREAKV 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++I F R + + D D+I+A+L +K ++ Sbjct: 508 QFGTKLTNENVEADVIDFMLGRFRAWYQDAGFSIDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L ++ ++ Sbjct: 568 FRELEAAEALAAANKRVGNILA---KFDGELAAEIDLSLLQEDAEKALAESVTVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|91204463|emb|CAJ70963.1| similar to glycine-tRNA ligase (beta-chain) [Candidatus Kuenenia stuttgartiensis] Length = 708 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 229/734 (31%), Positives = 354/734 (48%), Gaps = 86/734 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A + + K + +Q++ TP RL +++KGL Sbjct: 1 MTDLLFEIGTEEIPAGYITPALNQIKTLFGERFKYFRLTFQSIYCTGTPRRLVVFIKGLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 EE GP V G KA GF +S G+++ + Q KK K G+ +A+ Sbjct: 61 EEQESVTEEIQGPSVAIAFDKAGNLTKAGLGFAKSQGIES-NTLQTKKTAK-GEYCIAIK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L I+ IQK +PKSM+W T + + RP++S+L + Sbjct: 119 QITGEKTLHLLPGILEEIIQKTSFPKSMKWKTNN-----LFFARPIRSLLALF-----GN 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLD--HYIRDLEEAMVLLDPECRRNAILND 231 K++ L++ I GN+ GH F + I++Q D Y + L++ V++D RRN + Sbjct: 169 KVVPLEINGIKAGNVFSGHPFLSGKKIEIQVADWEQYKQLLKQEKVIVDIPERRNILKEK 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +L G +D+ LL+E+ LVE+ SFD K+L +P+ +I +K +Q+ F Sbjct: 229 ITKLMKQHGATF-DDESLLDEVANLVEYPNAVTCSFDDKFLDIPDIVIETAMKEHQRYFP 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + +G L N FI+ N + I QGN RV+ ARL DA FWK D+ Sbjct: 288 VKKADGKLINKFIVALNRDEPNENYPI-QGNERVLKARLYDARFFWKEDR---------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA-QLID----- 405 PL++R+ D+ +VF K+G ER RI L ++ QLI Sbjct: 337 ----------KIPLEKRVE--DLKQLVFLEKLGNYYERTGRIVALTDYLSKQLIRFNHPD 384 Query: 406 ---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 AD+ RA +L K DL T++V EFP LQG +G+EYA E + AIEEH PR Sbjct: 385 FSIADIDAAKRAALLCKTDLLTQMVGEFPSLQGIMGREYAAWDGEEPAVALAIEEHYLPR 444 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P++ I V LADK DT+ +A+ P+GS+DPY+LRR GIIRII E+ Sbjct: 445 FAADKIPSSIIGAIVGLADKFDTISGCFALGLHPTGSQDPYSLRRHAYGIIRIIEEHGFT 504 Query: 523 IPLSQFIEDQNLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRP 562 + L + + IL FF +RL ++ HDL+ A+L Sbjct: 505 LMLEEVLGQSLSILMSQTQSSLFTSDKLIPEIKNFFRERLFHTNIEKGCSHDLVNAVLNA 564 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKF---LLS-AKRIFQILAIEEKKNREISLEISPQY 618 + D ++ L + S EK+ L+S +R F I KK + + +S Sbjct: 565 -GAGFDDMYDFLQRLKD-VSMLSKEKYWPDLVSVVERTFNI----SKKVKGEGM-VSTNL 617 Query: 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI-CEPIEIFFDQVLVNVDDREV 677 L + E +L+ + + I+ + K+Y + + + EP+ FF++V VNV+D E+ Sbjct: 618 LNEKEELQLWEIYTANEAKIRTMIQDKKYVEASFTYNEVFAEPVHAFFEKVFVNVEDMEI 677 Query: 678 RDNRLSLLQYIKNI 691 R+NRL LL+ I + Sbjct: 678 RNNRLLLLREINQL 691 >gi|225025762|ref|ZP_03714954.1| hypothetical protein EIKCOROL_02666 [Eikenella corrodens ATCC 23834] gi|224941543|gb|EEG22752.1| hypothetical protein EIKCOROL_02666 [Eikenella corrodens ATCC 23834] Length = 687 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 216/676 (31%), Positives = 346/676 (51%), Gaps = 60/676 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I + I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IENLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ +++K+P PK MRW + S F+++RP+ Sbjct: 109 VYDGKQ-DVYAYEYVQTGKPLGELLEDIINQSVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 L +L D I+++ + + GN T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HG-LVVLHGGD----IVNVSVLGLQSGNQTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI + A + + D+ LL+E+ LVE+ V F+K +L +P+E Sbjct: 218 ASFAERKAAIQTALNEQAGRLNATVAADEALLDEVTALVEYPVVLEAGFEKHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDPNGKLMNRFLLVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +K + V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDRLPESKTATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + + L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLGVNELIQTTFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ E+ L EK Sbjct: 554 RLDDLTAKLQAVTAFKQLPEAAALAAANKRVQNLL---KKADAELG-EVDESLLQQNEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVVEGNFQTALSELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLL 669 Query: 686 QYIKNIILIVINVQKI 701 + + V ++ K+ Sbjct: 670 NCLAEQMNAVADITKL 685 >gi|84394118|ref|ZP_00992852.1| glycyl-tRNA synthetase beta subunit [Vibrio splendidus 12B01] gi|84375264|gb|EAP92177.1| glycyl-tRNA synthetase beta subunit [Vibrio splendidus 12B01] Length = 693 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 214/705 (30%), Positives = 336/705 (47%), Gaps = 69/705 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ Sbjct: 4 NFLIELGTEELPPTALRSLAEAFASNFEAGLKTAELSHEGIKWYAAPRRLALKVTALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 64 QADKVVEKRGPAISVAFDAEGNATKAAQGWARGNGITVEQADRLKTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++++ I A+ +P PK+MRW S +IRP+K++ +L E + KI Sbjct: 122 AGKPVQELVMDIAAKALAGLPIPKAMRWGN-----SDIQFIRPVKTLTVLLGDELVEGKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + + GHRF + S D Y LEE V+ D + R+ IL DA + Sbjct: 177 LG-----VASARTIRGHRFMGEQEFTIDSADQYPAILEERGKVMADYDARKAIILADAKK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F + Sbjct: 232 AADAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEQEFLKVPSEALVYTMKGDQKYFPVYS 291 Query: 295 RE------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 E +L N FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 HEIGDAERSLLPN-FIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------ 337 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 FN D +PL R+A LD +F ++GT ++ RI L IA+ IDADV Sbjct: 338 --------FNTDRKRPLIDRLAELDQ--AIFQKQLGTIKDKTDRITELAGYIAEQIDADV 387 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +L+K DL T +V EF + QG +G YA EN A+ E PR + + Sbjct: 388 EKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGENEQVALALYEQYMPRFAGDTL 447 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ Sbjct: 448 PSTGISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDL 506 Query: 529 IE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 I + ++I F R + + D D+I+A+L Sbjct: 507 IGKAKELLGDKLTNDNVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFDQR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K ++ F E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 567 VKAVSHFRELEAAEALAAANKRVGNILA---KFDGELPAEIDLTLLQEDAEKALAENVEV 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 624 MTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 668 >gi|313201807|ref|YP_004040465.1| glycyl-tRNA synthetase subunit beta [Methylovorus sp. MP688] gi|312441123|gb|ADQ85229.1| glycyl-tRNA synthetase, beta subunit [Methylovorus sp. MP688] Length = 701 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 210/729 (28%), Positives = 358/729 (49%), Gaps = 61/729 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLS 60 + L+E++ EE+P + +K E S L+ +LK +G+ + + Y +P RL ++ + Sbjct: 4 NLLVELFVEELPPKALNKLGEAFSSTLLEVLKSQGLTSETSQVTAYASPRRLAAHISDVV 63 Query: 61 PHSPEK-IEERLGP-RVG--AGKKAIDGFLR---STGLQTISDCQIKKD-PKKGDVYLAV 112 + +K + +L P VG A KA L+ + G + Q+K++ K D+ Sbjct: 64 AKAADKSLSHKLMPATVGLDANGKATPALLKKLTALGADESAVSQLKREHDGKADILFLE 123 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + L+ + A+ K+P PK M + S +++RP ++ + E Sbjct: 124 GTAAGATLSEGLQKALDEALAKLPIPKVMTYQLQDGWTS-VNFVRPAHGLVALHGNE--- 179 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +I + + GN T GHRF A P+ ++ DHY L E V+ RR I+ Sbjct: 180 --VIPVSALGLQSGNTTQGHRFEAKVSPVTLRHADHYAEQLHTEGAVIASFAERRAEIVR 237 Query: 231 DAHRLASAVGLEL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A+ G +L ++D+ LL+E+ LVE V +G F+ ++L +P+E + LT+K NQK Sbjct: 238 QLTAAAAKAGPQLTPIQDEALLDEVTALVERPNVLLGQFEDEFLQVPQECLILTMKANQK 297 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + +G L+N F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 YFPLLSADGQLSNKFLIVSNISPDDA-SAVIGGNERVVRPRLADAKFFFDQDRK------ 350 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 K L+ R+ LD VV+H K+G+QG+R +R+ + I Q + D Sbjct: 351 --------------KTLESRLTSLD--KVVYHNKLGSQGQRTTRVASIASAIGQQLGGDA 394 Query: 409 ALVDRAIVLSKA--DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A A DL T++V EFPELQG +G+ YA + + AIE+H KPR + Sbjct: 395 LASKAAQAARLAKADLVTDMVGEFPELQGIMGRYYAQHEGLDNDVAYAIEDHYKPRFAGD 454 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-- 524 +P N++ + V+LADKL+TL + I + PSG KDP+ALRR LG++R+++EN + + Sbjct: 455 ELPRNQVGVVVALADKLETLCGMFGIGQIPSGDKDPFALRRHALGVVRLLIENSLPLTLD 514 Query: 525 ---------LSQFIEDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +E+ + L F +DRL L ++ ++A+L E L I Sbjct: 515 TLLNTTFGCFAADVENASTALRSFIYDRLSGSLREQGYSAQEVDAVLALEPQQLADIAKR 574 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + E + KR+ IL +K ++ I+ L+ AE L ++ Sbjct: 575 LEAVKAFAALPEAESLAAANKRVGNIL---KKAEGDVQASINQALLVEPAELALAQALAS 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y L ++ P++ FFD V+VN +D ++ NRL LL + + Sbjct: 632 VTPQADAAFAAGDYRSSLQALAALRTPVDAFFDGVMVNAEDPALKANRLGLLASLHQAMN 691 Query: 694 IVINVQKIV 702 V ++ ++ Sbjct: 692 RVADLSRLA 700 >gi|94994891|ref|YP_602989.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10750] gi|229558580|sp|Q1J5E1|SYGB_STRPF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94548399|gb|ABF38445.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10750] Length = 679 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 203/700 (29%), Positives = 351/700 (50%), Gaps = 82/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 GVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGTE-TTITSADSYEADLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGHLMPNFVS 299 Query: 306 V--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNLDLS 362 V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 300 VRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL--------------- 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA + K Sbjct: 342 ------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF ELQG +G++YA L E+ + AI EH P +P K+ ++L Sbjct: 394 FDLLTGMVGEFDELQGIMGEKYARLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 454 ADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDS 513 Query: 532 ------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +++ F R+ + + + D+ EA+L + + +++ ++ Sbjct: 514 LTYANKADVMNFIRARVD-KMMGKAVPKDIREAVLES---STFVVPEMLAAAEALVKASH 569 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + + + + + + EK + S+++ P E E L+A I ++ Sbjct: 570 TENYKPAVESLSRAFNLAEKAD--ASVQVDPSLFENEQENTLFAAIQGL------TLAGS 621 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 Q+ + + ++ I FFD +V +D+ +++NRL++L Sbjct: 622 AAQQL-EQVFALSPVINDFFDNTMVMAEDQALKNNRLAIL 660 >gi|227892548|ref|ZP_04010353.1| glycyl-tRNA synthetase beta chain [Lactobacillus ultunensis DSM 16047] gi|227865669|gb|EEJ73090.1| glycyl-tRNA synthetase beta chain [Lactobacillus ultunensis DSM 16047] Length = 687 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 214/736 (29%), Positives = 356/736 (48%), Gaps = 90/736 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVPRSVKQLADRTKKFLKENGLKFKDIKTFSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF R G+ T D K+ KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGM-TTDDIYFKE--LKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + ++ K Sbjct: 121 KEGKKASDILMGMSDI-IKDMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSDVIPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y L++ V+ + E R++ I+N + Sbjct: 175 ILD-----ITAGRKTEGHRFLGDSVV-LANADDYEDALKDQYVIANAEERKDMIVNQMNE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D+DLLEE+ LVE+ VF GSFDKKYL +P+E++ ++K NQ+ F Sbjct: 229 LVKKNHWQVKPDRDLLEEVTYLVEYPTVFAGSFDKKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 EDGNLINHFIAVRN-GNKDYLDNVISGNEKVLVARLDDAQFFYDEDR------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + RL DV FH KIG+ E++ R+R++G +A+ L D V Sbjct: 335 -------KYPLSHFVDRLK--DVSFHDKIGSMAEKMQRVRLIGDYLAKRWNLPDNVVKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLENV 468 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P GPL Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGENEEVSVAIKEHYMPTTAEGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 I-------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + DQ + F DR+K YL ++D+++A+L + Sbjct: 503 LPEIISMLNGVTPAKLPKGDADQEIADFIRDRVKQYLQKNKFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++ L + + + S RI IL +K + ++++ +EK LY Sbjct: 563 VLAAANVLQLHHDDEEFKPVVESLTRIDNIL---KKAKFKGNVDVDESLFDDNSEKELYV 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + + + + DL + I+ +FD ++ + +V++NRL+ L Sbjct: 620 GVQNL----------QDVESLADLYQGFVQLQPVIDQYFDTNMIMAKNEKVKNNRLAQLY 669 Query: 687 YIKNIILIVINVQKIV 702 + + + ++ K+V Sbjct: 670 AVSELADRLGDLSKLV 685 >gi|253690527|ref|YP_003019717.1| glycyl-tRNA synthetase, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511928|sp|C6DII7|SYGB_PECCP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|251757105|gb|ACT15181.1| glycyl-tRNA synthetase, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 689 Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 207/718 (28%), Positives = 330/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGEVSWFAAPRRLALKVARLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAIAQAFDAEGKTTKAAEGWARGCGITVEQAERLTTD--KGEWLLYRAHAK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++ A+ K+P PK MRWS + ++RP+ ++ +L +++I Sbjct: 124 GEQAQALLAGMISTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL-----GDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I GHRF + S D Y + L E V+ D + R+ I DA Sbjct: 174 PGQVLGIHSARTLRGHRFMGEAEFTIDSADQYPQILLERGKVVADYDARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 SGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSSAVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D I+A+L +K ++ F Sbjct: 511 YGAKLTNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ ILA K ++ ++ L AE L + + Sbjct: 571 RSLDAAAALAAANKRVSNILA---KSTDTLNESVNAAVLKDAAEITLATHLVVLRDKLTP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V ++ Sbjct: 628 LFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQVADI 685 >gi|261823642|ref|YP_003261748.1| glycyl-tRNA synthetase subunit beta [Pectobacterium wasabiae WPP163] gi|261607655|gb|ACX90141.1| glycyl-tRNA synthetase, beta subunit [Pectobacterium wasabiae WPP163] Length = 689 Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 206/718 (28%), Positives = 335/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L +++ ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRNLAESFAANFTAELDAANLVHGDVSWFAAPRRLALKVARLNASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D + +Y A+ + Sbjct: 66 PDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERLTTDKGEWLLYRALAKGE 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + +L +V A+ K+P PK MRWS + ++RP+ ++ +L E++I Sbjct: 126 Q--AQALLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL-----GEELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I GHRF + S D Y + L E V+ D + R+ I DA Sbjct: 174 PGQVLGIHSARTIRGHRFMGEAEFTIDSADQYPQILLERGKVVADYDARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 SGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++G+ ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWIAGQIGADVNHAMRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSSAVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E+ Sbjct: 451 ALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D I+A+L +K ++ F Sbjct: 511 YGTKLTNTKAVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ ILA K ++ ++ L AE L + + Sbjct: 571 RSLDAAAALAAANKRVSNILA---KSTDTLNESVNAAVLKDAAEITLATHLVVLRDKLTP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V ++ Sbjct: 628 LFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQVADI 685 >gi|331701383|ref|YP_004398342.1| glycyl-tRNA synthetase subunit beta [Lactobacillus buchneri NRRL B-30929] gi|329128726|gb|AEB73279.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus buchneri NRRL B-30929] Length = 693 Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 219/737 (29%), Positives = 357/737 (48%), Gaps = 87/737 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI EEIPA + + + L LK++ + + ++ + TP RL LY+ L+ Sbjct: 4 NFLLEIGLEEIPAHVVTPSIKQLKKRASDFLKDQRISFAEIKTFSTPRRLALYITDLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ + GP G KA GF R G T D K KG Y+ V Sbjct: 64 QPDIDKSVKGPAKKIAQDSDGNWTKAAIGFSRGQG-ATPDDITFKD--VKGVEYVFV--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K + LK I+P I + +P M+W T +F ++RP+K ++ +L Sbjct: 118 EKHIAGKSLKEILPGMKDVITAMTFPTMMKWGTY-----SFEYVRPIKWLVALL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I + ++ +T GHRF I++ + D Y L E V+ D R+ I Sbjct: 168 DKVIPFKILDVDTDRMTSGHRFLGKD-IELANADEYEEKLTEQYVVADAVKRKELITKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +++A+ ++ D DLLEE+ LVEW F G+FD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NKIAADNNWQINLDPDLLEEVNNLVEWPTAFFGNFDEKYLAIPDEVLITSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L FI V N D +V GN +V+ ARL+DA+ F++ DQ K+ Sbjct: 287 TDQDGKLLPHFISVRNGNDYDI-QNVVAGNEKVLTARLDDAMFFYQEDQ---------KK 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK---KIAQLIDADVA 409 S + L K V FH KI T E++ R++V+ K +A L + ++ Sbjct: 337 SIADYVERLKK-------------VSFHDKISTMYEKMQRVQVISKHLGNLAGLSEQELK 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++RA + K DL T +V EF ELQG +G +YA+L+ E+ + AI EH P +P Sbjct: 384 DLERAASIYKFDLVTGMVGEFAELQGVMGDKYALLKGEDQAVATAISEHYMPISANGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD+++ F+A PSGS DPYALRR G++RI+ + +++ L Q + Sbjct: 444 KTNVGSILAIADKLDSILTFFAAGMIPSGSNDPYALRRQATGVVRIVADKQLNFDLDQTL 503 Query: 530 ------EDQNLIL--------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 EDQ + F DR+K YL D +R+D+ +A+ + N+L Sbjct: 504 NLLIDREDQASVAPKLDMKAQVPAVSDFVKDRIKQYLDDLGVRYDIADAVTSGSHTNILF 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL-- 627 + K L + + + S R+ +I ++ + L + P ++EK L Sbjct: 564 NIASAKTLQDHKDDPDFKDIIESLTRVQRI--AKKGAFKADDLTVDPALFENDSEKALNQ 621 Query: 628 --YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 A D+ TH D R Q+ D I +FD +V D ++++N L L Sbjct: 622 AVAAAAKDY-THQSAEEDFGRLAQLKD-------KINDYFDATMVMAKDEKLKNNHLRQL 673 Query: 686 QYIKNIILIVINVQKIV 702 I N+I+ + ++ K+V Sbjct: 674 TMIANMIMYLGDLDKLV 690 >gi|325983624|ref|YP_004296026.1| glycyl-tRNA synthetase, beta subunit [Nitrosomonas sp. AL212] gi|325533143|gb|ADZ27864.1| glycyl-tRNA synthetase, beta subunit [Nitrosomonas sp. AL212] Length = 731 Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 219/752 (29%), Positives = 376/752 (50%), Gaps = 100/752 (13%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + +L L+ +G++ Q+ + Y TP RL +++ ++ + +K + ++ Sbjct: 16 PPKSLKQLGDSFAQLLTASLEAQGLMSQDAPVTAYATPRRLAVHIGNVAAQAADKAVTQK 75 Query: 71 LGP-RVG--AGKKAIDGFLR---STGLQTISDCQIKK--DPKKGDVYLAVLRKPKRLIED 122 L P +VG A +A L+ S G Q+K D K ++ + L D Sbjct: 76 LMPVKVGLDAQGQATPPLLKKLASLGADASVVPQLKHELDGKTETLFWDSIATGTALT-D 134 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L+ + I ++P PK M + S+ +++RP+ +++ + A+ I+ L + Sbjct: 135 GLQKALQETITQLPIPKVMTYQLADG-WSSVNFVRPVHALVALHGAD-----IVPLTILG 188 Query: 183 IPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVG 240 + G T GHRF A +PI + + D Y + L E V+ RR I + A+ Sbjct: 189 LQAGRETQGHRFEAKVNPIVLHNADSYAQQLLTEGAVMAGFVDRRTEITHQLAVSAAKEN 248 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L ++D LL+E+ LVE V +G FD +L +P+E + LT+K NQK F +G LA Sbjct: 249 LTPIDDDALLDEVTALVEHPNVLVGKFDAAFLQVPQECLILTMKANQKYFPLLDAQGKLA 308 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+LVSNI+ ++ A ++ GN RVV +RL DA F F+ D Sbjct: 309 NKFLLVSNIRPTNP-AQVIAGNERVVRSRLADAKFF--------------------FDQD 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA---IVL 417 K L R+ LD +V++H K+G QG+R+ +R + K I Q ++ ++ L ++A +L Sbjct: 348 RKKTLASRVPELD--EVIYHNKLGVQGQRMHYVRAIAKMIGQQLNGEI-LANQAYTAAML 404 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL T +V EFPELQG +G+ YA AIE+H KPR +++P N++ I + Sbjct: 405 AKTDLLTGMVGEFPELQGIMGRYYAQYDGLGNDIAFAIEDHYKPRFAGDDLPRNEVGICL 464 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS----------- 526 +LADKL+ L+ + I E P+G KDP+ALRR LG++RI++E K+ + L+ Sbjct: 465 ALADKLEILVGMFGIGEIPTGDKDPFALRRHALGVVRILIEKKLPLELNTLIMQTASIFN 524 Query: 527 -QFIEDQ--------------------------------NLILFFHDRLKLYLHDRDIRH 553 Q IE+Q L+ F ++RL L ++ Sbjct: 525 DQMIENQWSKSYFDWKKKSEMKALAVGVRGLNIKEESTGRLLEFIYERLAGSLREQGYTA 584 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 ++A+L NL I + + F + + KR+ IL +K + S++ Sbjct: 585 QEVDAVLSLNPQNLSDIPKRLAAVRSFAVLPEAVSLAAANKRVGNIL---KKTEGDTSVK 641 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESM---DHKRYHQIGDLLHSICEPIEIFFDQVLV 670 ++ L AE++LY V+ D + ++ D+K Y QI L ++ P++ FFD V+V Sbjct: 642 VNSSLLQEPAEQKLYDVLIDLSIEVDGALFARDYKAYLQI---LAALKLPVDTFFDHVMV 698 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 N+D+ +R+NRL+LL+ + +I+ + ++ K+ Sbjct: 699 NIDNESLRNNRLALLRELHDIMNRIADLSKLA 730 >gi|309806591|ref|ZP_07700588.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 03V1-b] gi|308167011|gb|EFO69193.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 03V1-b] Length = 689 Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 361/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLDT+I+F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGSLLSIADKLDTIISFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S RI IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRIANIL---KKASFSEAEQINPDLFENNSEKALYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|304398082|ref|ZP_07379957.1| glycyl-tRNA synthetase, beta subunit [Pantoea sp. aB] gi|304354368|gb|EFM18740.1| glycyl-tRNA synthetase, beta subunit [Pantoea sp. aB] Length = 689 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 205/718 (28%), Positives = 336/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L + + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAEAFAAQVTAELDAANLSHGEVSWFAAPRRLALKVANLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP V G KA +G+ R G+ ++ D + VY A ++ Sbjct: 66 PDREVEKRGPAVSAAFDADGNATKAAEGWARGNGITVDQAERLATDKGEWLVYRAQVKG- 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++ A+ K+P PK MRW S ++RP+ ++ +L +++I Sbjct: 125 -EAAQALLPAMIATALSKLPVPKLMRWGD-----SDVQFVRPVHTVTMLL-----GDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF I + + D Y LE+ V+ D + R+ I DA Sbjct: 174 PGTILGIKSDRVIRGHRFMGESEITLDNADQYPDVLEKRGQVIADYQVRKAMIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 234 ARRLGGNADISDSLLEEVTSLVEWPVVLTATFEEKFLKVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++S+ I+ GN +VV RL DA F Sbjct: 294 DGNLMPNFIFVTNIESSEP-RQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQKELGTLRDKTDRIQALASWIAGEIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSSPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D ++A+L +K ++ F Sbjct: 511 YGSKLSNARVVDDVIDFMLGRFRTWYQEEGHSIDTLQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L E +L ++ + +Q Sbjct: 571 RTLEAASALAAANKRVSNILA---KSTETLNESVQASLLKENEEIQLATFVTALSSKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + ++ FFD+V+VN DD+ VR NRL+LL ++ + L V ++ Sbjct: 628 YFAEGRYQDALVELAQLRTAVDNFFDKVMVNADDQAVRVNRLTLLSKLRELFLQVADI 685 >gi|327395920|dbj|BAK13342.1| glycyl-tRNA synthetase beta chain GlyS [Pantoea ananatis AJ13355] Length = 689 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 210/724 (29%), Positives = 342/724 (47%), Gaps = 73/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L + + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAEAFAAQVTAELDAANLNHGEVSWFAAPRRLALKIASLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP V G KA +G+ R G+ ++ D + VY A ++ Sbjct: 66 PDREVEKRGPAVAAAFDAEGNATKAAEGWARGNGITVEQAERLSTDKGEWLVYRAQVKG- 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW S ++RP+ ++ +L +++I Sbjct: 125 -EAAQALLPGMVATALSKLPVPKLMRWGD-----SDVQFVRPVHTVTLLL-----GDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF I +++ D Y LE+ V+ D + R+ I DA Sbjct: 174 PATILGIKSDRVIRGHRFMGESEITLENADQYPDVLEKRGQVIADYQVRKAMIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 234 ARRLGGVADLSDSLLEEVTSLVEWPVVLTATFEEKFLKVPSEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI V+NI++SD I+ GN +VV RL DA F Sbjct: 294 EGNLLPNFIFVTNIESSDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F+ D K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV RA Sbjct: 334 -FDTDRKKRLEDHLPRLET--VLFQKELGSLRDKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSSPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPEN-DNLLTIVDLI 574 ++I F R + + + D ++A+L RP + D + V Sbjct: 511 YGSKLSNANAVNDVIDFMLGRFRSWYQEEGHSIDTLQAVLARRPTRPADFDARMKAVSHF 570 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+E + A KR+ ILA K ++ + L E +L ++ Sbjct: 571 RTLDEAAALAAAN------KRVSNILA---KSTEPLNDSVQASLLKENEEIQLATFVTAL 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + +Q RY L + E ++ FFD+V+VN +D VR NRL+LL ++ + L Sbjct: 622 SSKLQPYFAEGRYQDALIELAQLREAVDNFFDKVMVNAEDEAVRINRLTLLSKLRGLFLQ 681 Query: 695 VINV 698 V ++ Sbjct: 682 VADI 685 >gi|304437024|ref|ZP_07396987.1| glycyl-tRNA synthetase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369975|gb|EFM23637.1| glycyl-tRNA synthetase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 682 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 222/733 (30%), Positives = 338/733 (46%), Gaps = 89/733 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA + EDL+ + +LKE + Y+ +R TP R L + GL+ Sbjct: 4 DLLFEIGTEEIPAHVMPHLLEDLAQLAETMLKEHRLSYEKVRTLGTPRRAALIVTGLAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G KA GF R G+ + Q + G VY +V Sbjct: 64 QEDVNTETRGPSVAIAFDADGNPTKAGAGFARGQGVDPSALIQ-----RDGYVYASVHES 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 E +L +++P ++ +P P SMRW F +IRP++ + + E I Sbjct: 119 GAATAE-LLTSLLPDLVRAIPLPNSMRWGDLD-----FRFIRPIRWFVALYGTE-----I 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + GN + GHR AP + S Y E+A +++DPE RR I Sbjct: 168 VPFTLAGVTSGNHSRGHRTLAPADFVITSAADYEAACEKAYIIVDPERRRAMICEQITET 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N GG A + GN RV+ ARL DA F+ D+ SL Sbjct: 288 DGSLLPAFITVRN-----GGKAHLDVVAHGNERVLRARLADAQFFFDEDRRK-----SLA 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DAD- 407 E R + VVF +G+ E+ R+ L I + + DAD Sbjct: 338 EH-----------------REKLKTVVFQRGLGSMYEKTERLTALTTAIVEEMAAGDADG 380 Query: 408 VALVD--RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 AL D RA LSKADL T +V EF ELQG +G+EYA+L E+ + AI+E PR Sbjct: 381 TALADARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGESPAVACAIDEQYMPRFAG 440 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P + + +S ADK+D ++ ++ P+GS+DP+ALRR LG++ +++E K + L Sbjct: 441 DELPQTPLGVALSAADKVDNIVGTFSQGRIPTGSQDPFALRRQALGLVLMLIEQKSTMLL 500 Query: 526 SQFIED------------QNLILFFHD----RLKLYLHDRDIRHDLIEAILRPENDNLLT 569 S +++ Q + + D RLK L +R +R+D+ EA+L + D + Sbjct: 501 SDLVDEACDLYDLDVSLCQKMQAYVADFIRLRLKNVLTERGVRYDVQEAVLE-DVDFVAD 559 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + ++ +S + + S R+ I + P E E L + Sbjct: 560 VPVRAAYVERLLASDGADALVQSFVRVGNI------ARGVTGGAVDPALFQAEEEGALLS 613 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 E D + ++ + I FFD V+V D V++NRLSLL+ I Sbjct: 614 AYQTAAAARAEGEDTLPAER------ALGKAINTFFDAVMVMDKDARVKENRLSLLKMID 667 Query: 690 NIILIVINVQKIV 702 + +L + KIV Sbjct: 668 DYLLETADYSKIV 680 >gi|222153556|ref|YP_002562733.1| glycyl-tRNA synthetase subunit beta [Streptococcus uberis 0140J] gi|254781865|sp|B9DV92|SYGB_STRU0 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|222114369|emb|CAR43106.1| glycyl-tRNA synthetase beta chain [Streptococcus uberis 0140J] Length = 679 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 212/696 (30%), Positives = 360/696 (51%), Gaps = 74/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + K+ L + LKE + +++++ + TP RL + + GL+ + IE+ GP Sbjct: 15 PAYVVTKSEMQLGEKVASFLKENRLSFESIQTFSTPRRLAVRVIGLAEKQEDLIEDFKGP 74 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + + E+VLK Sbjct: 75 SKKIALDENGEFSKAAQGFVRGKGLTTDA---IEFRTIKGEEYVYVTKHENGKDAEEVLK 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W+ H+ F +IRP+ ++ +L +I Sbjct: 132 DI-PSVLSSLTFPVSMHWAN-HT----FEYIRPVHTLTVLLDDNALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G + GHRF + +++ + Y DL+ V++DP+ R+ IL+ + A + + Sbjct: 181 GQKSRGHRFLGKE-VTIENANSYESDLKTVFVIVDPKERQQMILDQIKAIEIAENVAVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMG+FD+KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFMGTFDQKYLDVPEEVLVTSMKNHQRYFVVRDKNGHLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N S+ +++GN +V+ ARLED FWK DQ K N++ Sbjct: 300 VRN-GNSEYIENVIKGNEKVLVARLEDGEFFWKEDQ--------------KLNIE----- 339 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E ++R +V+ +A+ L D + +DRA + K DL Sbjct: 340 -DLVAKL--ANVTFHEKIGSLSEHMARTKVIASHLAEKVGLSDQERQALDRASQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ AI EH P +P +K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGESAMVATAIREHYLPNSAEGALPESKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------QNLIL 536 LDTL++F++++ PSGS DPYALRRAT GI+RI+ +IP+ +E+ ++L Sbjct: 457 LDTLLSFFSVDLIPSGSNDPYALRRATQGIVRILEAFGWNIPMDALVENCYQLPFESLTY 516 Query: 537 FFHDRLKLYLHDR-------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 D++ ++ R I D+ +A+L N + +++ + L S+++ + + Sbjct: 517 TNKDQVMSFISARVDKMMGKAIPKDIRDAVLASTNYQVPQMLETAQAL---VSASQSQGY 573 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + + + ++ + EK +E +I+ + E LY I + E ++ Q Sbjct: 574 KTAVENLSRVFNLAEKAEQEP--QINSDLFENDEEIALYKAIENLNL---EGNAKEKVEQ 628 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ + I FFD +V V+D V++NRL+LL Sbjct: 629 ----LFALNDVIVNFFDHTMVMVEDVNVKNNRLALL 660 >gi|312874251|ref|ZP_07734285.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2052A-d] gi|311090321|gb|EFQ48731.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2052A-d] Length = 689 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 360/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S RI IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAGQINPDLFENNSEKELYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|290894220|ref|ZP_06557189.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J2-071] gi|290556217|gb|EFD89762.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J2-071] Length = 688 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 211/722 (29%), Positives = 349/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++G++ Sbjct: 4 DFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGMAEE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q + + G Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDEEGNWSKAALGFAKS---QKVDPADLTFRDINGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + T++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSTLLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVTTSNTSRGHRFLGKSATIKQPSD-YPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQAGELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSAELPGADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE A+ E F + + + +++ I K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNE---HAEAEWFRPTIEALSRVVKI--AKKYEDGVEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIERLKAFADLRTT----IDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|322387698|ref|ZP_08061307.1| glycyl-tRNA synthetase beta subunit [Streptococcus infantis ATCC 700779] gi|321141565|gb|EFX37061.1| glycyl-tRNA synthetase beta subunit [Streptococcus infantis ATCC 700779] Length = 703 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 216/703 (30%), Positives = 351/703 (49%), Gaps = 79/703 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y+ ++ + TP RL + + GL+ + E+ GP Sbjct: 40 PAYVVTPSEKQLGEKMAAFLDDNRLSYEGIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 99 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + E+VL Sbjct: 100 SKKIALDAEGNFSKAAQGFVRGKGL-TVDDIEFRE--IKGEEYVYVTKHEAGKPAEEVLN 156 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SMRW+ + F +IRP+ ++ +L ++ ++LD +I Sbjct: 157 GI-PEVLASLSFPVSMRWAN-----NTFEYIRPVHTLTVLL-----DDEALELDFLDIHS 205 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H ++++ D Y DL + V+ D R N I + + G+++ Sbjct: 206 GRVSRGHRFLG-HEVEIRHADSYEEDLRKVYVIADSIERENMIREQIKEIEAEHGVQVQI 264 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+ LL E++ LVE+ FMG+FD KYL +PEE++ +++T+Q+ FV R EG L FI Sbjct: 265 DEGLLNEVLNLVEYPTAFMGNFDPKYLEVPEEVLVTSMETHQRYFVVRDLEGNLKPNFIS 324 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ LK DL L Sbjct: 325 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQK------------LKIE-DLVAKL 370 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 V FH KIG+ E R +I +L +K +D + L RA + K D Sbjct: 371 SH---------VTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDESIDLA-RAAAIYKFD 420 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L EN + AI EH P +P +K+ ++LAD Sbjct: 421 LLTGMVSEFDELQGIMGEKYALLAGENAAVAQAIREHYLPDSADGALPESKVGAILALAD 480 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------ 529 KLDTL++F+++ PSGS DPYALRRAT GI+RI+ + +IP+ + I Sbjct: 481 KLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEDFGWNIPMDELIASLYALSFDSLT 540 Query: 530 -EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++Q +L F R+ + D+ EA+L N + D+I+ +AK E Sbjct: 541 YDNQEEVLNFIKARVDKMMG--STAKDIKEAVLASSN---FVVSDMIEAAEALSEAAKTE 595 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + S + + + + EK E S+++ E EK L + ++ S K Sbjct: 596 DYKSSVESLSRAFTLAEKA--EGSVKVDTSLFENEQEKELAQAVESL--ELKGSASDKLT 651 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 L + I+ FFD +V +D +V++NRL++L + N Sbjct: 652 Q-----LFVLSPVIDAFFDNTMVMAEDIDVKNNRLAILAELVN 689 >gi|16803498|ref|NP_464983.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes EGD-e] gi|224501601|ref|ZP_03669908.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL R2-561] gi|25009330|sp|Q8Y754|SYGB_LISMO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|16410887|emb|CAC99536.1| glyS [Listeria monocytogenes EGD-e] Length = 688 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 211/722 (29%), Positives = 350/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++G++ Sbjct: 4 DFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGMAEE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q + + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDEEGNWSKAALGFAKS---QKVDPADLTFRDIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + T++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSTLLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVTTSNTSRGHRFLGKSATIKQPSD-YPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQAGELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEVI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE A+ E F + + + +++ I K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNE---HAEAEWFRPTIEALSRVVKI--AKKYEDGVEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIERLKAFADLRTT----IDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|306829215|ref|ZP_07462405.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis ATCC 6249] gi|304428301|gb|EFM31391.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis ATCC 6249] Length = 678 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 209/699 (29%), Positives = 349/699 (49%), Gaps = 81/699 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMASFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDGDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGKPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLG-QETEIQSALSYEEDLRAQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLDVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A G +++GN +V+ ARLED FW+ DQ + + DL + L Sbjct: 300 VRNGNAEHLGN-VIKGNEKVLVARLEDGEFFWREDQKLIIS-------------DLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 + V FH KIG+ E R +I +L +K +D V L RA + K D Sbjct: 346 NH---------VTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTAAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + ++K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLASSN---FVVADMLEAASALVEASKKEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF---GTHIQESMDHKR 646 S + + + + EK E S + P E EK L + GT Q+ Sbjct: 573 KSSVESLSRAFNLAEKA--EGSDTVDPALFENEEEKALAEAVESLVLSGTASQQL----- 625 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + L ++ I+ FF+ +V +D+ +R NRL++L Sbjct: 626 -----EQLFALSPVIDAFFENTMVMAEDQSIRQNRLAIL 659 >gi|293397822|ref|ZP_06642028.1| glycyl-tRNA synthetase, beta subunit [Neisseria gonorrhoeae F62] gi|291611768|gb|EFF40837.1| glycyl-tRNA synthetase, beta subunit [Neisseria gonorrhoeae F62] Length = 687 Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 341/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGRQ-DVYAYEYVQTGKPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P++ Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQKC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|254492884|ref|ZP_05106055.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 1291] gi|226511924|gb|EEH61269.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 1291] Length = 687 Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 339/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGRQ-DVYAYEYVQTGKPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAMPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAGRAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGAVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|114561194|ref|YP_748707.1| glycyl-tRNA synthetase subunit beta [Shewanella frigidimarina NCIMB 400] gi|122301220|sp|Q08A46|SYGB_SHEFN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114332487|gb|ABI69869.1| Glycine--tRNA ligase [Shewanella frigidimarina NCIMB 400] Length = 694 Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 220/727 (30%), Positives = 346/727 (47%), Gaps = 72/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + AE L + + +++ Y P RL + + GL+ Sbjct: 5 NLLIEVGTEELPPKALRTLAESFLTSFTDELTKADLPFESAVWYAAPRRLAINVLGLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA--VL 113 +K+ E+ GP V G KA G+ R G+ ++ D + V+ A V Sbjct: 65 QADKVVEKRGPAVSSAFDADGNPTKAAQGWARGNGITVEQAERLVTDKGEWLVHQAKVVG 124 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + K LI D+ + A+ K+P PK MRW + +IRP+ ++ +L +E Sbjct: 125 VETKSLIADMAQR----ALDKLPIPKPMRWGNNKT-----QFIRPVHTVTMLLGSE---- 171 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 ++ +L I I GHRF ++ D+Y+ L E+ VL D E R++ I DA Sbjct: 172 -LVAGELLGITSNRIIRGHRFMGKASFELDHADNYLAALKEQGKVLADYELRKSLIKADA 230 Query: 233 HRLASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A+ +G + ++D LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 231 EAAAAKLGGIADIQD-GLLEEVASLVEWPIVLTASFEEKFLNVPSEALVYTMKGDQKYFP 289 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 290 VFDKAGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF--------------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-----IDA 406 FN D L+ R+A L+ VVF ++GT RV RI L IA ++ Sbjct: 334 -----FNTDKKNTLESRIASLET--VVFQKQLGTLKARVERISELAGFIATQMNNNGVET 386 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + RA +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + Sbjct: 387 NSVDASRAGLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAIALEEQYKPKFSGD 446 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 VPT +S V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+R+I+ENK+ + L Sbjct: 447 TVPTATVSCAVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRVIVENKLPLDLV 506 Query: 527 QFI---------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + I +++ F R + + D+ I+ D+I A+L Sbjct: 507 ELIAKAQALHATNITNTNTSDDVLEFLLARFRAWYQDKGIQVDVILAVLARRPTKPADFD 566 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F + KR+ ILA K E+ I+ L AEK L + Sbjct: 567 SRVKAVSHFRGLEASTALAAANKRVSNILA---KVEGELPATINSALLTEPAEKALADKL 623 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ Sbjct: 624 VQLQPQLAPLFADGNYQQALTLLADLRENVDQFFEDVMVMADDEALKNNRLALLTNLREQ 683 Query: 692 ILIVINV 698 L V ++ Sbjct: 684 FLHVADI 690 >gi|240117022|ref|ZP_04731084.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] gi|268602708|ref|ZP_06136875.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] gi|268586839|gb|EEZ51515.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] Length = 687 Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 211/660 (31%), Positives = 344/660 (52%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGRQ-DVYAYEYVQTGKPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q ++ + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQ-TENPSHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|126439880|ref|YP_001057753.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 668] gi|167718173|ref|ZP_02401409.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei DM98] gi|167917629|ref|ZP_02504720.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei BCC215] gi|217419517|ref|ZP_03451023.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 576] gi|254187677|ref|ZP_04894189.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|126219373|gb|ABN82879.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 668] gi|157935357|gb|EDO91027.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|217396821|gb|EEC36837.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 576] Length = 699 Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 210/683 (30%), Positives = 336/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ--TIS 95 +Y TP RL + ++ + +PE+ + E++ P GA + L + G +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPERQVREKVLPVSVALDAQGAPSAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKAEAFFVNYAAPGATLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I G+ T GHRF + + ++ + Y L E+ Sbjct: 169 VRPVHRLTVL-----HGDRIVPVAAFGIDAGDTTLGHRFLSDGLVAIRHANAYADTLREK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 VL RR I A+A G ++V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVLAHFAQRRETIRTQLE--ANANGDQVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL +R+ L +VV+H K+G+Q RV R+ Sbjct: 341 FFFEQDKK--------------------KPLAERVPLL--ANVVYHNKLGSQLARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD + RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 TLAGEIAPAIGADATVAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDVAIA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CSEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + I FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVWLLRTAYERFAAVPGVAESTDAIHAFFIDRLRGLLRERGYTAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L L IV + + EF A+ E + KRI IL +K + + P Sbjct: 559 LSLNPTRLDDIVARLNAVREFTRLAEAEALAAANKRISNIL---KKSESGANGAVQPALF 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L ++D +Q ++ + Y L ++ P++ FFD V+VN DD +R Sbjct: 616 VEAAEKALAEQLADVTPRVQSQLEARAYTGALTALAALRAPVDAFFDGVMVNADDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|121635587|ref|YP_975832.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis FAM18] gi|229558566|sp|A1KW08|SYGB_NEIMF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120867293|emb|CAM11064.1| putative glycyl-tRNA synthetase beta subunit [Neisseria meningitidis FAM18] Length = 687 Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 342/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGGLLEDIINAAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVL 218 ++ + + I+++ + + N T GHRF + I +++ D Y + E+ V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAAQMREQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ +DAD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALDADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ E++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-EVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|238854655|ref|ZP_04644985.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 269-3] gi|282932954|ref|ZP_06338351.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|313472194|ref|ZP_07812686.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 1153] gi|238832445|gb|EEQ24752.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 269-3] gi|281302989|gb|EFA95194.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|313449093|gb|EEQ68575.2| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 1153] Length = 688 Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 357/731 (48%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF+R G+ T I + KG Y V ++ Sbjct: 64 QADIDEVKKGPAKKIALDSEGNFTKAAQGFVRGQGMTT---DDIYFEDLKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K +L D+L + + I+ + +P MRW + F ++RP+ ++ + +E K Sbjct: 121 KAGKLATDILLGMSDI-IKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSEVVPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF I S D Y L+ V+ D R+ I+N + Sbjct: 175 ILD-----ITAGRKTMGHRFLGDSVILANS-DDYEEALKSQFVIADAAERKTMIVNQIDQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 229 LVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 QDGKLINHFISVRN-GNKEFLENVISGNEKVLVARLDDAKFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ L D + Sbjct: 335 -------KYPLSHFVSRLD--KVSFHDKIGSMAEKLIRVRIIGEYLAKKFGLSDEVIKNF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT+ Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-EN---KIDIPLSQ 527 ++ +S+ADK D +I F+A P+ S DPYALRR GI+RI+L EN ID L + Sbjct: 446 EVGALLSVADKFDNIITFFAAGMIPTSSNDPYALRRYAYGIVRILLNENWSLAIDKALPK 505 Query: 528 FI----------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + ED+ + LF DR+K +L + ++D+I+A+L + I+ Sbjct: 506 MVELLDGKTKAKMPKTSQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQKDPSRIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S + + + S RI IL + K + + +E LY Sbjct: 566 AAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELY--- 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +++D+ ++ + S+ + I+ +F+ ++ D V++NRL+ L I + Sbjct: 620 --LASQNLQAIDN--LTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINEL 675 Query: 692 ILIVINVQKIV 702 + + K+V Sbjct: 676 ATRLGALSKLV 686 >gi|309805181|ref|ZP_07699233.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 09V1-c] gi|308165415|gb|EFO67646.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 09V1-c] Length = 689 Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 360/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S RI IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|315653575|ref|ZP_07906495.1| glycyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] gi|315488937|gb|EFU78579.1| glycyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] Length = 689 Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 360/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S RI IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|212632930|ref|YP_002309455.1| glycyl-tRNA synthetase subunit beta [Shewanella piezotolerans WP3] gi|226737059|sp|B8CH76|SYGB_SHEPW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|212554414|gb|ACJ26868.1| Glycyl-tRNA synthetase, beta subunit [Shewanella piezotolerans WP3] Length = 689 Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 218/714 (30%), Positives = 351/714 (49%), Gaps = 61/714 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE LK+ + +++ + P RL + + L+ Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLNNFTDELKKAELTFESAVWHAAPRRLAINVNQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEQADRLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIAAMAQRSLDKLPIPKPMRWGSNTT-----QFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ++ +L I I GHRF I++ D+Y+ L E+ V + E R+ I DA Sbjct: 173 VEGELLGIKSDRIIRGHRFMGKPSIELDHADNYLSVLKEQGKVDANYEARKAQIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKLGGVADLEDDLLEEVTSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F++ D+ N Sbjct: 293 DAGQLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFETDKKN----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R++ L+ VVF ++GT +RV RI + IA I A+ RA Sbjct: 341 ---------SLESRLSSLET--VVFQKQLGTIKQRVERISAMAAYIATSIGANSEEAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT +S Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALSEQYKPKFSGDTVPTAPVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L +Q Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQE 509 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +NL + FF R + + D+ I D+I A+L IK + Sbjct: 510 LHGENLTNDKAPEQVLEFFMGRFRAWYQDQGISVDVILAVLARRPTAPADFESRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K E+ I L+ AEK L A +++ + Sbjct: 570 FRTLEQALALAAANKRVSNILA---KVEGELPATIDEALLVEAAEKALAAKLAELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 Y + LL S+ E ++ FF+ V+V DD +++NRL+LL +++ L Sbjct: 627 PLFAAANYQEALALLASLRESVDTFFEDVMVMADDEALKNNRLALLSSLRDQFL 680 >gi|260441366|ref|ZP_05795182.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI2] gi|291044723|ref|ZP_06570432.1| glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae DGI2] gi|291011617|gb|EFE03613.1| glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae DGI2] Length = 687 Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 340/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGRQ-DVYAYEYVQTGKPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|325912088|ref|ZP_08174486.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 143-D] gi|325476038|gb|EGC79206.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 143-D] Length = 689 Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 360/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S RI IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRIANIL---KKASFSEAEQINPDLFENNSEKALYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|312872904|ref|ZP_07732964.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2062A-h1] gi|311091426|gb|EFQ49810.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2062A-h1] Length = 689 Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 361/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLDT+I+F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGSLLSIADKLDTIISFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IDLLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S RI IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|190571503|ref|YP_001975861.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018906|ref|ZP_03334714.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357775|emb|CAQ55229.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995857|gb|EEB56497.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 702 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 228/721 (31%), Positives = 350/721 (48%), Gaps = 83/721 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 + L E SEEIP+RMQ+ +A + + + V + ++ Y T R+ L++ G+S Sbjct: 2 LSQLLFECLSEEIPSRMQNSSAAQVKSYITNAFSKNNVKFASIEVYVTARRIALFIDGIS 61 Query: 61 P-HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 + E GPRV A K AI+GFLR + D I+K D Y Sbjct: 62 ALELKDSNNEIKGPRVNAPKSAIEGFLRKNR-KGEEDLLIRK-VNDEDFYFIKRESCLFN 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 I LK + ++ WPKSMRWS W+RP+K+ILCIL ++II + Sbjct: 120 INGFLKNQLEEMLKNFSWPKSMRWSERKE-----RWVRPIKNILCIL-----NDEIIPIS 169 Query: 180 LKEIPCGNITYGHRFHAPHPI-KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + N+TYGHRF + + V++ Y LE+ V+L + R+ IL+ ++ Sbjct: 170 FAGVTACNVTYGHRFLSGDAVLTVKTPKDYFELLEKNNVILQLDKRKQFILDQINKFTKE 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 L+L ++ LL E+ GL+EW V G K LP+++I I T QK +G Sbjct: 230 ENLQLEKNDYLLNELAGLIEWPIVLFGKV--KSSELPKKVILSIINTQQKYLALS--DGQ 285 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 + F+ V N+ +V+G+ R++ ARL DA +D+ KE+ Sbjct: 286 KISHFVTVVNVNN----NEVVKGHERILEARLADAQFLISQDK---------KEN----- 327 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVL 417 LD + +L + FHA +G+ E+V RI L K IA I A + V+RA L Sbjct: 328 ------LDYYVKKLS--SISFHASLGSVEEKVKRIIALSKYIAIFIPHASLIKVERAAYL 379 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T IV+EFP LQG + YA E+ +AI EH KP G + P + +I V Sbjct: 380 AKADLATLIVKEFPGLQGVMSGYYASYFQEDKEVVEAITEHYKPIGSDQECPRSPTAIAV 439 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------- 529 ++ADK+D+L+ A EK SGS D + LRR T+GIIR ILEN + IP+ I Sbjct: 440 AIADKMDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILENNLHIPIRLLIDKSVSLCS 499 Query: 530 ---------------EDQNLILFFH---DRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E Q L L F +R K+ L +R+IR D++++IL + I Sbjct: 500 RLLLNKNITPVDKPSEKQILELVFKFCLERFKIILKNRNIRQDVVDSILYK-----VDIN 554 Query: 572 DLIKH------LNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 DL+K L+ + S+ +GE+ L + KR +++ + + + S ++L+ + E Sbjct: 555 DLLKAEKQTVILDRYLSTKEGEQVLSTYKRASNMMSKVRKSDGTTYNASYSKKFLIEDEE 614 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L +I++++++ ++ D L I F D V +N D E+R NRLSL Sbjct: 615 IALSNCAIAACKNIKQAIENNDFNTALDELARFAPFINQFMDSVKINCDSNELRINRLSL 674 Query: 685 L 685 L Sbjct: 675 L 675 >gi|194100114|ref|YP_002003254.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae NCCP11945] gi|238690173|sp|B4RJG3|SYGB_NEIG2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|193935404|gb|ACF31228.1| glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae NCCP11945] Length = 687 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 212/660 (32%), Positives = 338/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + R + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGRQ-DVYAYEYVQTGRPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAMPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAGRAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGAVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|240114820|ref|ZP_04728882.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] gi|268600476|ref|ZP_06134643.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] gi|268584607|gb|EEZ49283.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] Length = 687 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 212/673 (31%), Positives = 347/673 (51%), Gaps = 60/673 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + R + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGRQ-DVYAYEYVQTGRPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + + +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 Query: 686 QYIKNIILIVINV 698 + + V ++ Sbjct: 670 NRLAGQMNAVADI 682 >gi|218708120|ref|YP_002415741.1| glycyl-tRNA synthetase subunit beta [Vibrio splendidus LGP32] gi|254781871|sp|B7VGK6|SYGB_VIBSL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218321139|emb|CAV17089.1| Glycyl-tRNA synthetase beta chain [Vibrio splendidus LGP32] Length = 688 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 211/699 (30%), Positives = 332/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ Sbjct: 4 NFLIELGTEELPPTALRSLAEAFASNFEAGLKTAELSHEGIKWYAAPRRLALKVTALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 64 QADKVVEKRGPAISVAFDAEGNATKAAQGWARGNGITVEQADRLKTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++++ I A+ +P PK+MRW S +IRP+K++ +L E + KI Sbjct: 122 AGKPVQELVMDIAAKALAGLPIPKAMRWGN-----SDIQFIRPVKTLTVLLGDELVEGKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + + GHRF + S D Y LEE V+ D + R+ IL DA + Sbjct: 177 LG-----VASARTIRGHRFMGEQEFTIDSADQYPAILEERGKVMADYDARKAIILADAKK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A AVG + DL+EE+ LVEW V F++ +L +P E + T+K +QK F Sbjct: 232 AADAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEQVFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ADKNLLPNFIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+A LD +F ++GT ++ RI L IA+ IDADV RA Sbjct: 333 --FNTDRKRPLIDRLAELDQ--AIFQKQLGTIKDKTDRITELAGYIAEQIDADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDTLPSTGIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 449 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIGKAKE 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++I F R + + D D+I+A+L +K ++ Sbjct: 508 LLGDKLTNENVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E+ EI L +AEK L + ++ Sbjct: 568 FRELEAAEALAAANKRVGNILA---KFDGELPAEIDLALLQEDAEKALAENVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|85057990|ref|YP_453692.1| glycyl-tRNA synthetase subunit beta [Sodalis glossinidius str. 'morsitans'] gi|123739018|sp|Q2NX38|SYGB_SODGM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|84778510|dbj|BAE73287.1| glycyl-tRNA synthase beta subunit [Sodalis glossinidius str. 'morsitans'] Length = 689 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 212/718 (29%), Positives = 338/718 (47%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE +I + G L V + + + P RL + + L Sbjct: 6 FLVEIGTEELPPKALRALAEAFAIHISGELDAANVRHGEVSWFAAPRRLAVKVAALGGAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E+ GP + G KA +G+ R G+ ++ D + VY A R Sbjct: 66 ADSDVEKRGPAIAQVFDADGNPTKAAEGWARGCGITVSQAERLATDKGEWLVYRA--RVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++++L +V A+ K+P PK MRW + +IRP+ ++ +L + +I Sbjct: 124 GQPVQELLCAVVSRALGKLPIPKMMRWGDNET-----QFIRPVHTVTLLL-----DDGVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 ++ I I GHRF I ++ D Y + L + V+ D R+ I DA Sbjct: 174 AGNVLGIDADRIVRGHRFMGEREISLEHADQYPQVLLDRGRVMADYLQRKETIRRDAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AKRLGGVADLSESLLEEVTSLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGNLLPHFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D + L+ R+ RLD V+F ++GT ++ RI L IA I ADV RA Sbjct: 334 -FNTDHKQRLEDRLPRLDT--VLFQKQLGTLRDKSDRIEALSAWIAGRIGADVPQAARAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E + A +E +PR + +PT +S Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEPEAVALAQKEQYQPRFAGDALPTTLVSC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRATLG++RII+E ++ + L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRATLGVLRIIVEKQLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + ++ D I+A+L ++ ++ F Sbjct: 511 YGEKLTNDAVVNDVIDFMLGRFRAWYQEQGHSVDTIQAVLARRPTRPADFDARVRAVSYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K + + ++ L +E L + +Q Sbjct: 571 RTLEEAASLAAANKRVSNILA---KSDDPVYKDLQASVLKDPSEITLATHLVVLREKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + RY L ++ EP++ FFD V+V DD +VR NRL+LL ++ + L V ++ Sbjct: 628 LFEAGRYQDALVELAALREPVDAFFDSVMVMADDPQVRINRLTLLAQLRKLFLQVADI 685 >gi|187922692|ref|YP_001894334.1| glycyl-tRNA synthetase subunit beta [Burkholderia phytofirmans PsJN] gi|187713886|gb|ACD15110.1| glycyl-tRNA synthetase, beta subunit [Burkholderia phytofirmans PsJN] Length = 699 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 211/686 (30%), Positives = 338/686 (49%), Gaps = 61/686 (8%) Query: 42 NMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ-- 92 + +Y TP RL + +K + +PEK + E++ P + G + L + G Sbjct: 49 SFERYATPRRLAVTIKNVRAVAPEKHVREKVLPVSVALDKDGQPTAPLAKKLAALGFPDF 108 Query: 93 TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 +++D + +D K + + P + D L++ + + K+P PK M + + Sbjct: 109 SVNDLERAQD-GKAEAFFLRYAAPGATLADGLQSALDETLAKLPIPKVMTYQRPDG--TN 165 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 ++RP + + E+++ + I + T GHRF + +++Q D Y L Sbjct: 166 VQFVRPAHRLTAL-----HGEQVVPVSALGIDADDTTLGHRFLSEGFVQIQHADTYAETL 220 Query: 213 -EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKY 271 + V+ + R+ I H LA A G ++V + LL+E+ LVEW V+ F ++ Sbjct: 221 LHKGHVVANFADRKETIRT--HLLAQADGDQVVMPESLLDEVTSLVEWPVVYACRFGDEF 278 Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 L +P+E + LT++TNQK F G L + F++VSNI+ S G IV+GN RVV RL Sbjct: 279 LQVPQECLILTMQTNQKYFALTDANGKLRSRFLIVSNIETSTPGD-IVEGNERVVRPRLA 337 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F+++D+ KPL R+ L +VV+H K+G+ +RV Sbjct: 338 DAKFFFEQDKK--------------------KPLADRVPLL--ANVVYHNKLGSALQRVE 375 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R+ L IA+LI ADVAL RA L+KADL T++V EFPELQG +G YA E Sbjct: 376 RVEALAGAIAELIGADVALAKRAARLAKADLITDMVGEFPELQGTMGTYYARHDGEPEEV 435 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A EH +PR + +PT V+LADKL+TL+ W I +P+G KDP+ALRR LG Sbjct: 436 ALACSEHYQPRFSGDALPTTATGTVVALADKLETLVGIWGIGLQPTGEKDPFALRRHALG 495 Query: 512 IIRIILENKIDIPL--------SQFI-------EDQNLILFFHDRLKLYLHDRDIRHDLI 556 ++RI++E ++ + L +QF Q + F DRL+ L +R I Sbjct: 496 VLRILVEKQLPVDLVELLRTAHAQFAAVPNVTDSTQAIYEFSMDRLRGLLRERGYAPGEI 555 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L L IV + + EF + + + KRI IL +K + + Sbjct: 556 DAVLALNPTRLDDIVARLDAVREFAALPEAASLAAANKRISNIL---KKSEGAATGGVQV 612 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 L AEK LYA + +Q + + Y L ++ EP++ FF+ V+VN +D Sbjct: 613 ALLTEAAEKALYAQLEQVAPRVQSQLAARDYTGALTALAALREPVDTFFNDVMVNAEDPA 672 Query: 677 VRDNRLSLLQYIKNIILIVINVQKIV 702 +R NRL+LL + + V ++ ++ Sbjct: 673 LRANRLALLGALHQQMNCVADISRLA 698 >gi|310765834|gb|ADP10784.1| glycyl-tRNA synthetase subunit beta [Erwinia sp. Ejp617] Length = 689 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 207/718 (28%), Positives = 330/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L L G+ + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANLTAELDAAGLAHGEVSWFAAPRRLALKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ + R Sbjct: 66 PDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLMYRARVT 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V ++ K+P PK MRW S ++RP+ ++ +L E I+ Sbjct: 124 GERTQLLLPAMVATSLAKLPIPKLMRWGA-----SEVQFVRPVHTVTLLLGDELVPANIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D GHRF + D Y + L E V D E R+ I DA Sbjct: 179 GID-----SARTLRGHRFMGEPAFTIDHADQYPQILLERGKVQADYEARKAIIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 234 AAKIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D + L+ + RL+ V+F ++GT + RI+ L +A I ADV RA Sbjct: 334 -FNSDRKRRLEDNLPRLET--VLFQKELGTLRAKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + + D ++A+L +K ++ F Sbjct: 511 YGNKLSNAKAVDEVIDFMLGRFRTWYQEEGHSVDTLQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K ++ + L E +L ++ + +Q Sbjct: 571 RTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALSSKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + E ++ FFD+V+VN +D+EVR NRL+LL ++ + L V ++ Sbjct: 628 FFAEGRYQDALIELAQLRETVDNFFDKVMVNAEDKEVRINRLTLLARLRELFLQVADI 685 >gi|293365102|ref|ZP_06611819.1| glycyl--tRNA synthetase [Streptococcus oralis ATCC 35037] gi|307702190|ref|ZP_07639150.1| glycyl-tRNA synthetase, beta subunit [Streptococcus oralis ATCC 35037] gi|291316552|gb|EFE56988.1| glycyl--tRNA synthetase [Streptococcus oralis ATCC 35037] gi|307624203|gb|EFO03180.1| glycyl-tRNA synthetase, beta subunit [Streptococcus oralis ATCC 35037] Length = 678 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 351/696 (50%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMVAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ +AF +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAN-----NAFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLG-QETKIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + DL + L Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLVIS-------------DLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 + V FH KIG+ E R +I +L +K +D V L RA + K D Sbjct: 346 NH---------VTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTAAEGELPESKVGAILAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + ++K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLASSN---FVVADMLEAASALVEASKKEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + P E EK L + + ++ Q Sbjct: 573 KPSVESLSRAFNLAEKA--EGTDTVDPALFENEEEKALAEAVESL---VLSGAASQQLEQ 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQTVRQNRLAIL 659 >gi|86147197|ref|ZP_01065513.1| glycyl-tRNA synthetase beta subunit [Vibrio sp. MED222] gi|85835081|gb|EAQ53223.1| glycyl-tRNA synthetase beta subunit [Vibrio sp. MED222] Length = 688 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 207/699 (29%), Positives = 335/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ Sbjct: 4 NFLIELGTEELPPTALRSLAEAFASNFEAGLKTAELSHEGIKWYAAPRRLALKVTALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 64 QADKVVEKRGPAISVAFDAEGNATKAAQGWARGNGITVEQADRLKTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++++ I A+ +P PK+MRW S +IRP+K++ +L +++ Sbjct: 122 AGKPVQELVMDIAAKALAGLPIPKAMRWGN-----SDIQFIRPVKTLTVLL-----GDEL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ++ ++ + GHRF + S D Y LEE V+ D + R+ IL DA + Sbjct: 172 VEGEILGVASARTIRGHRFMGEQEFTIDSADQYPAILEERGKVMADYDARKAIILADAKK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AADAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEQEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ADKNLLPNFIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+A LD +F ++GT ++ RI L IA+ IDADV RA Sbjct: 333 --FNTDRKRPLIDRLAELDQ--AIFQKQLGTIKDKTDRITELAGYIAEQIDADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDTLPSTGIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 449 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIGKAKE 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++I F R + + D D+I+A+L +K ++ Sbjct: 508 LLGDKLTNENVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E+ EI L +AE+ L + ++ Sbjct: 568 FRELEAAEALAAANKRVGNILA---KFDGELPAEIDLALLQEDAERALAENVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|312871720|ref|ZP_07731808.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 3008A-a] gi|311092662|gb|EFQ51018.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 3008A-a] Length = 689 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 216/731 (29%), Positives = 360/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S R+ IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRVANIL---KKADFSEAGQINPDLFENNSEKALYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|28895307|ref|NP_801657.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes SSI-1] gi|161485738|ref|NP_665275.2| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS315] gi|73919751|sp|Q8K663|SYGB_STRP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28810553|dbj|BAC63490.1| putative glycyl-tRNA synthetase, beta subunit [Streptococcus pyogenes SSI-1] Length = 679 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 204/701 (29%), Positives = 349/701 (49%), Gaps = 84/701 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 GVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGTE-TTITSADSYEADLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGHLMPNFVS 299 Query: 306 V--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNLDLS 362 V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 300 VRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL--------------- 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA + K Sbjct: 342 ------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF ELQG +G++YA L E+ + AI EH P +P K+ ++L Sbjct: 394 FDLLTGMVGEFDELQGIMGEKYARLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 454 ADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDS 513 Query: 532 ------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +++ F R+ + + + D+ EA+L + + +++ ++ Sbjct: 514 LTYANKADVMNFIRARVD-KMMGKAVPKDIREAVLES---STFVVPEMLAAAEALVKASH 569 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + + + + + + EK + S+ + P E E L+A I ++ Sbjct: 570 TENYKPAVESLSRAFNLAEKA--DASVHVDPSLFENEQENTLFAAIQGL------TLAGS 621 Query: 646 RYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLSLL 685 Q+ + + P I FFD +V +D+ +++NRL++L Sbjct: 622 AAQQLEQVF--VLSPVINDFFDNTMVMAEDQALKNNRLAIL 660 >gi|254670880|emb|CBA07393.1| glycine tRNA synthetase beta subunit [Neisseria meningitidis alpha153] Length = 687 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 210/660 (31%), Positives = 337/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + N T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A ++ + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARSLNAAVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKLS--SVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK ++ L + EK Sbjct: 554 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL----KKADAALGAVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|239998102|ref|ZP_04718026.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] gi|268593954|ref|ZP_06128121.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] gi|268547343|gb|EEZ42761.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] Length = 687 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 212/673 (31%), Positives = 345/673 (51%), Gaps = 60/673 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + R + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGRQ-DVYAYEYVQTGRPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + + +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q ++ + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQ-TENPSHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAGRAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK E++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGEVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 Query: 686 QYIKNIILIVINV 698 + + V ++ Sbjct: 670 NRLAGQMNAVADI 682 >gi|53718310|ref|YP_107296.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei K96243] gi|53725037|ref|YP_102052.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei ATCC 23344] gi|67641460|ref|ZP_00440238.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei GB8 horse 4] gi|121600887|ref|YP_994024.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei SAVP1] gi|124386095|ref|YP_001028312.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei NCTC 10229] gi|126448019|ref|YP_001081956.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei NCTC 10247] gi|167002699|ref|ZP_02268489.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei PRL-20] gi|167737204|ref|ZP_02409978.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 14] gi|167814335|ref|ZP_02446015.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 91] gi|167822812|ref|ZP_02454283.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 9] gi|167844386|ref|ZP_02469894.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei B7210] gi|167909614|ref|ZP_02496705.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 112] gi|226196695|ref|ZP_03792275.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|254176698|ref|ZP_04883355.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 10399] gi|254203737|ref|ZP_04910097.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei FMH] gi|254208712|ref|ZP_04915060.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei JHU] gi|254296211|ref|ZP_04963668.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 406e] gi|254360235|ref|ZP_04976505.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei 2002721280] gi|52208724|emb|CAH34660.1| putative glycyl-tRNA synthetase beta chain [Burkholderia pseudomallei K96243] gi|52428460|gb|AAU49053.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 23344] gi|121229697|gb|ABM52215.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei SAVP1] gi|124294115|gb|ABN03384.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei NCTC 10229] gi|126240889|gb|ABO03982.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei NCTC 10247] gi|147745249|gb|EDK52329.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei FMH] gi|147750588|gb|EDK57657.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei JHU] gi|148029475|gb|EDK87380.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei 2002721280] gi|157805848|gb|EDO83018.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 406e] gi|160697739|gb|EDP87709.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 10399] gi|225931226|gb|EEH27233.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|238522400|gb|EEP85844.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei GB8 horse 4] gi|243061638|gb|EES43824.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei PRL-20] Length = 699 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 210/683 (30%), Positives = 335/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ--TIS 95 +Y TP RL + ++ + +PE+ + E++ P GA + L + G +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPERQVREKVLPVSVALDAQGAPSAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKAEAFFVNYAAPGATLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I G+ T GHRF + + ++ + Y L E+ Sbjct: 169 VRPVHRLTVL-----HGDRIVPVAAFGIDAGDTTLGHRFLSDGLVAIRHANAYADTLREK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 VL RR I A+A G +V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVLAHFAQRRETIRTQLE--ANANGDRVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL +R+ L +VV+H K+G+Q RV R+ Sbjct: 341 FFFEQDKK--------------------KPLAERVPLL--ANVVYHNKLGSQLARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD + RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 TLAGEIAPAIGADATVAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDVAIA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CSEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + I FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVWLLRTAYERFAAVPGVAESTDAIHAFFIDRLRGLLRERGYTAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L L IV + + EF A+ E + KRI IL +K + + P Sbjct: 559 LSLNPTRLDDIVARLNAVREFTRLAEAEALAAANKRISNIL---KKSESGANGAVQPALF 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L ++D +Q ++ + Y L ++ P++ FFD V+VN DD +R Sbjct: 616 VEAAEKALAEQLADVTPRVQSQLEARAYTGALTALAALRAPVDAFFDGVMVNADDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|322372433|ref|ZP_08046969.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C150] gi|321277475|gb|EFX54544.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C150] Length = 678 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 206/696 (29%), Positives = 351/696 (50%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ + F +IRP+ +++ +L ++ +DLD +I Sbjct: 132 G-VPEVLASLTFPVSMHWAN-----NTFEYIRPVHTLVVLL-----GDEALDLDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ LK + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQK------------LK--------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAKQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++Q +L F + R + D+ EA+L N + D+++ N +AK + + Sbjct: 517 DNQAEVLNFIKARVDKMMGRTSK-DIKEAVLAGSN---FVVADMLEAANALSEAAKTDGY 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + + + + + EK + S+ ++ + EK L + S K Sbjct: 573 KAAVESLSRAFNLAEKAD--ASVVVNAGLFENDQEKALAQAAESL--ELTGSASDKLAQ- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FFD +V +D +++NRL++L Sbjct: 628 ----LFALSPVIDAFFDNTMVMAEDEALKNNRLAIL 659 >gi|308271400|emb|CBX28008.1| Glycyl-tRNA synthetase beta subunit [uncultured Desulfobacterium sp.] Length = 699 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 210/728 (28%), Positives = 347/728 (47%), Gaps = 62/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLEI EEIPA A + LS IL+ L +E + + N + + TP RL + + +S Sbjct: 7 METLLLEIGMEEIPAGYIEPALKALSAILMQRLTDERIKHGNYKTFGTPRRLCICIYDVS 66 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIK------KDPKKGDVYLAVLR 114 E +GP G +G L G + I K +KG YL L+ Sbjct: 67 AKQDSLTTEIIGPPEKIGFDG-NGQLTIAGKKFAEKACISPESINVKQTEKGS-YLCALK 124 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + VLK I+P I ++P+PK M+W+ + RP++S+ +L Sbjct: 125 TESGIESKTVLKRILPQIILQIPFPKVMKWADLD-----IKFARPIQSVAALL-----GR 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I +L I T+GHRF P IK+ D YI L++A VL D + R+N+I Sbjct: 175 QLISFELGNIKSSGNTFGHRFLCPGKIKISHPDEYIEKLKKAFVLADIDERKNSIKEHIA 234 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A+ + +++D +L++ + LVE+ GSFD+ YL +P+E++ +++ +QK F Sbjct: 235 QIAAKLDGNVLKDDELVDVVTNLVEYPVPVAGSFDRSYLEVPDEVLINSMREHQKYFAII 294 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSN QA + +V+G+ RV+ ARLEDA F+K D + P Sbjct: 295 DANKRLLPNFIAVSNTQAKNM-QVVVKGHERVLKARLEDARFFYKNDIHISP-------- 345 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 D + +L V+F AK+GT E+ R+ L + +A I D + Sbjct: 346 ------------DDWVEKLK--GVLFQAKLGTMYEKTQRLEKLSQYLADEITDDAQIKKQ 391 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L KADL +++V EFP+LQG +G+ YA E+ + A+EEH +P +P Sbjct: 392 ALRAARLCKADLVSQVVGEFPKLQGIMGRIYAANAGEDKNVSIAVEEHYRPAYSGGELPE 451 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I V++ADK+D++ ++ P+G+ DPYALRR +GII+I+L L IE Sbjct: 452 TTIGSMVAIADKIDSICGCFSAGLIPTGASDPYALRRQGIGIIQIMLAKGFSFSLRSLIE 511 Query: 531 DQ-----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 N+ F R+ L + +++ AI+ ++ + Sbjct: 512 KSLSLFEIKDAIEITGRADNVYGFLQSRISHLLTEEGYAKNVVSAIVSISVSHVPDVWKR 571 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L + + + E+ + KR+ I+ +N I+ E E L++ D Sbjct: 572 TIALEKLKAVSDFEQLATTFKRVVNIIKKSAPENAGCETNINEGLFEKECESALFSAYKD 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + E++ Y Q + S+ P++ FFD VLV +D +R+NR++LL+ I ++ Sbjct: 632 IKIRVSENLLQGAYEQSLLDIASLRTPVDAFFDGVLVMAEDENIRNNRIALLRAISDLFA 691 Query: 694 IVINVQKI 701 + + K+ Sbjct: 692 LFADFSKL 699 >gi|332522303|ref|ZP_08398555.1| glycine--tRNA ligase, beta subunit [Streptococcus porcinus str. Jelinkova 176] gi|332313567|gb|EGJ26552.1| glycine--tRNA ligase, beta subunit [Streptococcus porcinus str. Jelinkova 176] Length = 679 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 207/698 (29%), Positives = 353/698 (50%), Gaps = 78/698 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L+ + Y+ ++ + TP RL + + GL+ + +E+ GP Sbjct: 15 PAYVVTASEKQLGQKMAAFLESNRLSYERIQTFSTPRRLAVRVLGLADKQEDLVEDFKGP 74 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK-RLIEDVLK 125 G KA GF+R GL T D + ++ KG+ Y+ V + K + ++VL Sbjct: 75 SKKIALDDQGNFSKAAQGFVRGKGL-TTDDIEFRE--IKGEEYVYVTKNEKGKSTQEVLM 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W++ ++F +IRP+ ++ +L ++++++ +I Sbjct: 132 GI-PDLLASLTFPVSMHWAS-----NSFEYIRPVHTLTVLL-----DDQLLEMPFLDISS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 + GHRF I +Q+ Y DL V+ DP R+ IL+ L + + Sbjct: 181 ARYSRGHRFLGKE-IAIQNALSYEADLRSQSVIADPLERQQMILDQIKGLEKEHHIYVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ F+GSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDDLLNEVLNLVEYPTAFLGSFDAKYLSVPEEVLVTSMKNHQRYFVVRDQSGKLLPNFIS 299 Query: 306 VSNIQASDGG-AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 V N +D +++GN +V+ ARLED FW+ DQ LK DL Sbjct: 300 VRN--GNDQYIENVIKGNEKVLIARLEDGEFFWREDQK------------LKIE-DLVAK 344 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRAIVLSKAD 421 L+ V FH KIG+ + + R V+ K +A+ + V V+RA + K D Sbjct: 345 LEH---------VTFHEKIGSLAQHMERTGVIAKYLAEKANLSVEETKAVERASQIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L E+ AI EH P +P K+ ++LAD Sbjct: 396 LLTGMVGEFDELQGLMGEKYALLAGEDSLVATAIREHYLPSSADGVLPETKVGAILALAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------- 531 KLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ Q I + Sbjct: 456 KLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWAIPMDQLIANCYQLSFASLS 515 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + ++ F R++ + + I D+ EA+L N + +++ ++K + Sbjct: 516 YSHQEEVMAFIAARIEKMMGN-GIPKDIREAVLASTN---YQVPEMLATAQALLEASKTD 571 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 ++ ++ + + ++ + K + +++ ++P + EK+LY ISD ++ + HK Sbjct: 572 QYKMAVENLSRVFNLASKVDAKVN--VNPSLFENQEEKQLYQAISDL--QLEGNATHKL- 626 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + L ++ + I +FF +V +D VR+NRL+LL Sbjct: 627 ----EQLFALTDKIAVFFAHTMVMAEDIMVRNNRLALL 660 >gi|254784294|ref|YP_003071722.1| glycyl-tRNA synthetase subunit beta [Teredinibacter turnerae T7901] gi|237687492|gb|ACR14756.1| glycyl-tRNA synthetase, beta subunit [Teredinibacter turnerae T7901] Length = 686 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 201/724 (27%), Positives = 352/724 (48%), Gaps = 73/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+E+ +EE+P + + + L ++ + + ++ Y TP RL + + GL+ + Sbjct: 3 FLVELGTEELPPTALKTLSHAFTQGIQDGLTQKNLGFDSVESYATPRRLAVSVTGLADKT 62 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVYLAV 112 P++ + GP + GA KA + F R G LQT D +++K VY Sbjct: 63 PQESVKIFGPPAQVAFKDGAPTKAAEAFARKNGIALEALQTGMDGKVEKL-----VYETT 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D+L +V ++ +P K MRW + + ++RP+ ++ + A Sbjct: 118 AGGEATV--DLLADLVAQSLANLPIAKRMRWGASRT-----EFVRPVHWLVML-----AD 165 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA-ILND 231 +K++ ++ + GN T GHRFH PI ++ + Y L E ++ R A I+ Sbjct: 166 DKVLPAEILGLTSGNETRGHRFHYNQPITLKHANQYAAALAETGHVVASFSERQAMIVKQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A +G V D DLL+E+ LVE+ G+F+ ++L +P E + ++K +QK F Sbjct: 226 VNTAADKLGGTAVIDADLLDEVTALVEYPVALAGNFENEFLNVPSEALISSMKEHQKYFH 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI ++NI + D A ++ GN RV+ RL DA F++ D+ Sbjct: 286 VVDNDGELLPHFITIANIVSQDP-AQVIDGNERVIRPRLSDAKFFFETDKQT-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L+ R +L VVF AK+GT ++ RI L IA + + A V Sbjct: 337 ------------SLEARREKLKT--VVFQAKLGTIYDKTERIGKLATLIAARLGENEATV 382 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L K+DL + +V EF +LQG G YA E+ A+ E P+ +++P Sbjct: 383 KRAAELCKSDLVSTMVYEFTDLQGIAGYHYANNDGEDAEVAQAMVEQYMPKFAGDDLPAT 442 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID--------- 522 ++LAD+LDT+ + I +KP+GSKDP+ALRRA++G +R+++E K+D Sbjct: 443 ATGTIIALADRLDTITGIFGIGQKPTGSKDPFALRRASVGALRLMVEKKLDLDLRDLINA 502 Query: 523 -------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +P +Q ++D ++ + +R + + + I ++ A+ + N L I + + Sbjct: 503 AADSFTALPNAQVVDD--VLAYMLERFRAWYEEASIPAEVFMAVSAKQLSNPLDINNRVY 560 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + EF A+ + + KR+ ILA K + + E+ L AEK+L ++ + Sbjct: 561 AVAEFSKLAEAQALAAANKRVSNILA---KLDSAPASEVDAALLTDGAEKQLADALASYA 617 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + Y +L + ++ FFD V+V DD VR+NRL+LLQ ++++ L V Sbjct: 618 AQARPLLAEANYTDALKVLAGLRATVDTFFDDVMVMTDDMAVRNNRLALLQSLRDLFLEV 677 Query: 696 INVQ 699 ++ Sbjct: 678 ADIS 681 >gi|295398005|ref|ZP_06808061.1| glycyl-tRNA synthetase beta subunit [Aerococcus viridans ATCC 11563] gi|294973763|gb|EFG49534.1| glycyl-tRNA synthetase beta subunit [Aerococcus viridans ATCC 11563] Length = 692 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 213/730 (29%), Positives = 365/730 (50%), Gaps = 78/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL EI EE+PA+ A L ++ L + + + N+ + TP RL + + GL+ Sbjct: 6 FLFEIGLEEVPAQYVRNAVNQLKSLVENFLSDNRLTFDNVETFATPRRLTVRVNGLADKQ 65 Query: 64 PEKIEERLGP--RV-----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRK 115 + E GP R+ G KA GF R G ++ D ++ KG+ Y+ + + + Sbjct: 66 TDFSEVAKGPAKRIAQDEEGNWTKAAQGFARGKGA-SVEDIYFEE--VKGEEYVFINISQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P D+L+ +V V I ++ +P SM W++ +IRP+ ++ +L +++ Sbjct: 123 PGSQAADILQDVVSV-IDQMSFPVSMHWASYD-----VKYIRPIHWMVALL-----DDQV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + NI+ GHR+ + + + Y L + V++ + R+ I +L Sbjct: 172 LPLTFLNLTASNISRGHRYLGSQEVVIVDANAYEAALADEFVIVKQDERKALIEQQIEQL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS ++ D DLLEE+ +VE+ F+G+FD KYL LP+E++ ++K +Q+ F + + Sbjct: 232 ASENKYQIDIDADLLEEVTQIVEYPTAFIGNFDDKYLALPDEVLITSMKNHQRYFYVKDQ 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ V N A + + +GN +V+ ARLED F Sbjct: 292 AGKLLPLFLAVRNGNA-EHLDNVRKGNQKVLTARLEDGFFF------------------- 331 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA-----QLIDADVAL 410 N D +K + RL V FHA+IG+ E+++R + K +A QL D Sbjct: 332 -VNEDKTKTIQDFQDRL--AKVTFHAEIGSLQEKMARTGQIAKYLAEKWSGQLADVQTGD 388 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + R + K DL T IV EF ELQG +G++YA+ E + AI EH P +P Sbjct: 389 ITRTGEIYKFDLMTGIVDEFSELQGIMGEKYALAFGEAPAVATAIREHYMPISAEGELPA 448 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID-------I 523 +++ +++DKLD++I+F+ I+ PSGS DP+ALRR T GI+RI++EN++ I Sbjct: 449 SQLGKLFAVSDKLDSVISFFNIDRIPSGSNDPFALRRQTSGIVRILIENELTFDWKTDII 508 Query: 524 PLSQF---IEDQNLIL--------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + Q IEDQ ++ F +DRLK L+D++IR+D+ +A+L+ + ++L + Sbjct: 509 SILQTVYGIEDQERLVELQTALSQFVNDRLKAILNDQEIRYDIADAVLQSHSADVLRKLA 568 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE-ISPQYLLLEAEKRLYAVI 631 K L A ++ L + RI + A K RE++++ ++ + E++ + Sbjct: 569 ASKVLQAASEKASFKETLEAWNRILNLGA----KARELNVQDVTIEESRFESDSEVALFN 624 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + G + M Y+Q+ L I E FFD +V +D+ V++NRL++L I Sbjct: 625 AAKGLEMTNDM-QNNYNQLEALTPVITE----FFDNNMVFAEDQTVQNNRLAILSMIAQA 679 Query: 692 ILIVINVQKI 701 IL + + +I Sbjct: 680 ILTLADTNRI 689 >gi|240124847|ref|ZP_04737733.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|268683428|ref|ZP_06150290.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|268623712|gb|EEZ56112.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] Length = 687 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 212/673 (31%), Positives = 347/673 (51%), Gaps = 60/673 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + R + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGRQ-DVYAYEYVQTGRPLGGLLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + + +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q D + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQK--------------------ATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 Query: 686 QYIKNIILIVINV 698 + + V ++ Sbjct: 670 NRLAGQMNAVADI 682 >gi|325129468|gb|EGC52298.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis OX99.30304] Length = 687 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 210/660 (31%), Positives = 341/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + N T G RF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----IVNVSVLGLQSSNQTLGPRFLSNGEITIENADSYAEQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 218 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q +D + I+QGN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADP-SHIIQGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR +N+P K++ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDNLPNGKVATAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L +V ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 554 RLDDVVAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|325127445|gb|EGC50375.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis N1568] Length = 686 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 209/660 (31%), Positives = 340/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V GA KA++GF R G + I D I Sbjct: 49 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK-IEDLTI 107 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D K+ DVY + + + ++L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 108 VHDGKQ-DVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGS-----STFTFVRPV 161 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + I+++ + + N T GHRF + I +++ D Y + + V+ Sbjct: 162 HGLIVLHGGD-----IVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVV 216 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVE+ V F++ +L +P+E Sbjct: 217 ASFAERKAAIQTALEGQARRLNATVAADEALLDEVTALVEYPVVLEAGFEEHFLAVPQEC 276 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q +D + I+QGN RV+ ARL DA F+K Sbjct: 277 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADP-SHIIQGNERVLRARLSDAEFFYK 335 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 336 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 373 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + A A +RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 374 HIAKALGAGAAAAERAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 433 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 434 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 493 Query: 519 NKIDI-PLSQFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D F RL + L + D D++ A+L + Sbjct: 494 YGLDVNELIQTAFDSFPKGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 552 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L +K + E+ ++ L + EK Sbjct: 553 RLDDLTAKLQAVAAFKQLPEAAALAAANKRVQNLL---KKADAELG-AVNESLLQQDEEK 608 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 609 ALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 668 >gi|219670261|ref|YP_002460696.1| glycyl-tRNA synthetase subunit beta [Desulfitobacterium hafniense DCB-2] gi|254781846|sp|B8FUJ0|SYGB_DESHD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219540521|gb|ACL22260.1| glycyl-tRNA synthetase, beta subunit [Desulfitobacterium hafniense DCB-2] Length = 690 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 207/713 (29%), Positives = 341/713 (47%), Gaps = 73/713 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI +EEIPA+ L +E + YQ+++ Y TP R + ++GL+ Sbjct: 4 DFLLEIGTEEIPAKFAPGVLNQLREQAQKYCQELRLDYQDLKVYTTPRRFAVLIQGLAEK 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V A KA GF R G++ D +++ VY Sbjct: 64 QTDFTAEVKGPAVKAAYDAEGNPTKAAQGFARGQGVEP-KDLFVQELNGVSYVYARKFEL 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L + I + +PK MRW+ F + RP++ I+ + +E + Sbjct: 123 GQPTLQ-LLPKLCTDLITGLHFPKPMRWADLE-----FRFARPIRWIVALFGSE-----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + G + GHR P+ + S Y + + +A V++DPE RR ++ H L Sbjct: 172 IPFEFVGLASGKASRGHRTLG-GPVTLDSPADYEKQMLQAFVMVDPEQRRQSVWEQIHAL 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ VG ++ +D DLL+E+ ++E+ +G Y+ LPE +I +K +Q+ F R + Sbjct: 231 AAKVGGDVEKDDDLLDEVTHIIEYPTALLGEVAPNYMHLPEPVITTPMKEHQRYFPVRDK 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N D A V+ GN +V+ ARLEDA +++ DQ Sbjct: 291 EGKLLPYFITVRN--GDDYALAKVKAGNEKVLKARLEDAAFYYREDQKT----------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LV 411 PL + + +LD V +H K+G+ +RV RIR L + IA + + LV Sbjct: 338 ---------PLAELVEKLD--KVTYHEKLGSVRQRVERIRTLARGIAARLGMESEKQDLV 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +R +L+KADL T +V +FPELQG +G +YA + E C I EH +PR + +P + Sbjct: 387 ERTALLAKADLVTLMVYDFPELQGIMGADYARMVGEKPEVCTGILEHYQPRFAGDELPQS 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 VS+ADKLD ++ + I +P+GS+DPYALRR G++ IILE DI L Q I Sbjct: 447 YTGQIVSVADKLDAIVGAFGIGIQPTGSQDPYALRRQAQGVVGIILEAGWDISLEQLIAA 506 Query: 530 -----EDQNLIL------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +Q + L FF RL+ L ++ R+D ++A+L ++ I Sbjct: 507 SYVNFAEQGISLLPLADLQSALQDFFQQRLRFVLQEQGARYDTLDAVLAQGSNQ---ITR 563 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + + + +F+ ++ + L + +K + + P+ L+ E L A + Sbjct: 564 AARKAQVLAAKRETTEFVPYSQAYIRCLNLSKKAQTQ---PLDPKNLIDPTEIALAAALV 620 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ Y + L + IE F+ V++ V+D ++ RL+LL Sbjct: 621 QRQEAFAALIEKGDYAEAYALASELIPMIEALFNAVMIMVEDEILKQARLALL 673 >gi|315038509|ref|YP_004032077.1| glycyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1112] gi|312276642|gb|ADQ59282.1| glycyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1112] gi|327183705|gb|AEA32152.1| glycyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1118] Length = 687 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 211/719 (29%), Positives = 349/719 (48%), Gaps = 90/719 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFATPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + ++ K Sbjct: 121 KEGKKATDILLGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSDVVPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y L++ V+ + E R++ I+N + Sbjct: 175 ILD-----ITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQMNE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVKENHWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRN-GNKDYLDNVISGNEKVLVARLDDAQFFYDEDR------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 335 -------KYPLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLAKRWDLPENVVKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P GPL Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 I-------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + DQ + F DR+K YL + ++D+++A+L + Sbjct: 503 LPEIINMLNGVTPAKLPKGDADQEIADFIRDRVKQYLQKNNFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL +K + +++I+ +EK LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRIDNIL---KKAKFKGNVKIAESLFDDNSEKELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLL 685 + + ++ + DL + I+ +FD ++ D +V++NRL+ L Sbjct: 620 GVENL----------QKVESLADLYQGFVQLQPVIDQYFDANMIMAKDEKVKNNRLAQL 668 >gi|163791425|ref|ZP_02185834.1| glycyl-tRNA synthetase, beta subunit [Carnobacterium sp. AT7] gi|159873289|gb|EDP67384.1| glycyl-tRNA synthetase, beta subunit [Carnobacterium sp. AT7] Length = 694 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 213/734 (29%), Positives = 348/734 (47%), Gaps = 79/734 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI EEIPA + +++ L + LKE + + + + TP RL + +K ++ Sbjct: 4 NLLLEIGLEEIPAHIVTPSSQQLVQKITAFLKENRLEHGEVIPFSTPRRLAVIVKDIAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G KA GF R G T D K VY+ Sbjct: 64 QEDVQESVKGPAQKIAQDAEGNWSKAAIGFARGQG-ATTDDIYFKSIKDVDYVYVDKFIS 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + ++L + V I + +P SM W+ H+ F +IRP + +L +++ Sbjct: 123 GKT-VNEILVGLDKV-ITSLTFPVSMHWAD-HT----FKYIRPFHWLTAML-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I +L +I N + GHRF H + Y LE V+ D R+ I+N L Sbjct: 171 IPFELLDIQTANTSRGHRFLG-HDVTFADALAYEETLESVFVIADSTKRKQMIVNQIEEL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + D++LLEE+ L+E+ F GSFD+KYL LPEE++ ++K +Q+ F R Sbjct: 230 VKANQWSVSMDEELLEEVNNLIEYPTAFYGSFDQKYLNLPEEVLITSMKDHQRYFGVRDS 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG + FI V N A + + +GN +V+ ARL+D F++ DQ Sbjct: 290 EGAVLPYFISVRNGNA-NHIETVARGNEKVLTARLDDGQFFFEEDQK------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL----- 410 L ++ +++ + V FH KIG+ E+++R++ IAQLI V L Sbjct: 336 ---LTIAACVER------LKQVTFHEKIGSIYEKMNRVQA----IAQLIGKQVGLNETEL 382 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+ Q E + AI EH P + Sbjct: 383 TDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALTQGETPAVAAAIREHYMPVSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+++++F+A+ P+GS DPYALRR T GI+RII + P+ Sbjct: 443 PKTSVGAVLAIADKLESVLSFFAVGMTPTGSNDPYALRRQTYGIVRIIESKNWNFPMESL 502 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E ++ F R++ L IRHD+I+A L ++LL Sbjct: 503 KEAILSTSVIAQSALFEGYKSSTAEVVDFIKARIRQLLLAESIRHDVIDAALNSRQEDLL 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +V+ + +N S + + + R+ + E + L + P +E+ LY Sbjct: 563 KLVEAGRIINSHLSDTIFKPTIEALTRVVNLANKGEAMLDQDQLSVDPALFETNSEQELY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 I+++++++ Q + IE FF++ +V D++ VR+NRL+LL I Sbjct: 623 EAF----VEIEKTVNNENSKQSYTSFEQLQPLIEAFFNENMVMADNQAVRNNRLALLMKI 678 Query: 689 KNIILIVINVQKIV 702 + +L +V K+V Sbjct: 679 SSFVLSFASVDKLV 692 >gi|319947574|ref|ZP_08021804.1| glycyl-tRNA synthetase beta subunit [Streptococcus australis ATCC 700641] gi|319746262|gb|EFV98525.1| glycyl-tRNA synthetase beta subunit [Streptococcus australis ATCC 700641] Length = 678 Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 209/698 (29%), Positives = 355/698 (50%), Gaps = 79/698 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ ++F +IRP+ +++ +L ++ +DLD +I Sbjct: 132 G-VPEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALDLDFLDIQS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ LK + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQK------------LK--------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++Q +L F + R + D+ +A+L N + D+++ +AK + + Sbjct: 517 DNQAEVLNFIKARVDKMMGRTAK-DIKDAVLAGSN---FVVADMLEAAEALSEAAKTDGY 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRY 647 + + + + + EK + ++++ S L E EK L I + + + K Sbjct: 573 KAAVESLSRAFNLAEKADASVAVDAS----LFENDQEKALAKAIEEL--ELAGAASDKLA 626 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FFD +V +D V++NRL+LL Sbjct: 627 Q-----LFALSPVIDAFFDNTMVMAEDEAVKNNRLALL 659 >gi|312867828|ref|ZP_07728033.1| glycine--tRNA ligase, beta subunit [Streptococcus parasanguinis F0405] gi|311096583|gb|EFQ54822.1| glycine--tRNA ligase, beta subunit [Streptococcus parasanguinis F0405] Length = 678 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 352/696 (50%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSNLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W+ + F +IRP+ + L +L+ ++A +DLD +I Sbjct: 132 GI-PEVLASMTFPVSMHWAN-----NTFEYIRPVHT-LTVLLGDEA----LDLDFLDIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGQLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ LK + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQK------------LK--------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L EN + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGENAAVATAIREHYLPDSADGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------------- 529 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++Q +L F + R + D+ EA+L N + D+++ +AK + + Sbjct: 517 DNQAEVLNFIKARVDKMMGRTPK-DIKEAVLAGSN---FVVADMLEAAEALSEAAKTDGY 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + + + + + EK + ++++ + L E ++ + + S K Sbjct: 573 KAAVESLSRAFNLAEKADASVAVDAN----LFENDQEKALAQAAESLELTGSASDKLAQ- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FFD +V +D V++NRL+LL Sbjct: 628 ----LFALSPVIDAFFDNTMVMAEDEAVKNNRLALL 659 >gi|282858171|ref|ZP_06267366.1| glycyl-tRNA synthetase, beta subunit [Pyramidobacter piscolens W5455] gi|282584093|gb|EFB89466.1| glycyl-tRNA synthetase, beta subunit [Pyramidobacter piscolens W5455] Length = 685 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 212/725 (29%), Positives = 347/725 (47%), Gaps = 70/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D +LEI +EEIP+R A D++ + + + + TP RL L ++ ++ Sbjct: 4 DLILEIGTEEIPSRFMPSALRDIAQYAEEEFAAQRLGHGRIEVMGTPRRLVLLVRSVAER 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKG-DVYLAVLR 114 + EE GP G +A +GF RS GL Q++ G D AV+ Sbjct: 64 QADLSEEHKGPTWKSAFDGTGTPTRAAEGFARSKGLAV---EQLESRNVNGVDYAFAVIN 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++ I ++ +PK+M W S + RP++ LC++ A+ Sbjct: 121 HKGGAADALLPDMMKRIISRIVFPKNMYWYD-----STVRFARPIRWFLCLIGAD----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECR----RNAILN 230 +++ +L + G T GHRF ++V+S D Y+ + + V++D + R R AI Sbjct: 171 VVEFELNGMKSGRTTCGHRFMGAPSVEVESSDDYLTVMYDNWVIVDQKKREEKMRAAIAG 230 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 L AV L D L++E + LVE+ F GSFD+KYL +PEE++ ++K NQK F Sbjct: 231 IEKELDGAVEL----DPSLVQENLYLVEYPVPFYGSFDRKYLEIPEEVLTTSMKDNQKYF 286 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L CF+ VSN + + +GN RV+ ARLEDA FWK D Sbjct: 287 AVHDHSGKLMPCFVGVSNNLVPNM-ELVREGNERVLRARLEDAAFFWKED---------- 335 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DV 408 L +PL R+ D+ +V++ K+G+ ++ + + +KI L+ DV Sbjct: 336 ----------LKRPLSARVE--DLKNVIYQEKLGSVYDKTMEMVKISRKICDLLGNKDDV 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV+RA LSKADL T +V EF ELQG +G+EYA+ E+ AI E P + Sbjct: 384 KLVERAAYLSKADLVTGMVGEFSELQGIMGREYALKNGEDPRVAKAIAEQYMPTAAGNEL 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII---LENKIDIPL 525 P++ I V +A++ ++ + + +P+ S+DPY LRRA I I+ + L Sbjct: 444 PSDVIGAVVGIAERAFNMVGAYKLGFQPTRSQDPYGLRRAIRCINEILWGLRLDLDLEAL 503 Query: 526 SQFIED---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 FI +L+ F R + L +++ H+LIE L L + L+ Sbjct: 504 LAFIAQDLEVGGEALSSLLDFIRQRTLIQLKEKEYGHELIELALSVTGSRPLQTLYLLGA 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 E K + SA R+ ILA K +S + P + AEK LYA +++ Sbjct: 564 FAEVKQEDWFTKLVNSAVRVKNILA----KAEGVSSSVDPSLCVKAAEKDLYAAVNEAEK 619 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ ++ ++ + ++L + + FFD V+V +D VR NRL+LL + +N+ + V Sbjct: 620 PVEAALRKNDWNGLMNVLAQLSPAVSAFFDDVMVMDEDAAVRANRLALLSHCQNLFMRVG 679 Query: 697 NVQKI 701 ++ K+ Sbjct: 680 DLSKV 684 >gi|306825538|ref|ZP_07458877.1| glycyl-tRNA synthetase beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431899|gb|EFM34876.1| glycyl-tRNA synthetase beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 678 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 212/699 (30%), Positives = 352/699 (50%), Gaps = 81/699 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E+++ Sbjct: 75 AKKIALDGDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQPVENIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLG-QETKIQSALSYEEDLRAQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D + L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQIAVLLAEKAGLSVDETIDLA-RAASIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L E + AI EH P +P +KI +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSADGALPESKIGAILAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYTLKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ ++ ++K E F Sbjct: 516 YGNKAEVMDFIKARVDKMMGSTPKDIKEAVLASSN---FVVADMLEAVSALVEASKEENF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF---GTHIQESMDHKR 646 S + + + + EK E S + E EK L + GT Q+ Sbjct: 573 KSSVESLSRAFNLSEKA--EGSETVDSALFENEEEKALAEAVESLVLSGTASQQL----- 625 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + L ++ I+ FF+ +V DD+++R NRL++L Sbjct: 626 -----EQLFALSPIIDAFFENTMVMTDDQDIRQNRLAIL 659 >gi|320106526|ref|YP_004182116.1| glycyl-tRNA synthetase subunit beta [Terriglobus saanensis SP1PR4] gi|319925047|gb|ADV82122.1| glycyl-tRNA synthetase, beta subunit [Terriglobus saanensis SP1PR4] Length = 697 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 205/716 (28%), Positives = 335/716 (46%), Gaps = 64/716 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKG 58 M +FL EI EE+PARM A +L+ + LL E ++ ++ + TP RL + ++G Sbjct: 1 MAEFLFEIGLEEVPARMLASAEAELARRTMDLLGRERLLDGDVSFESFSTPRRLAVLVRG 60 Query: 59 LSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDP------KKGDVYLAV 112 + P P+ EE +GP K DG + + D KG+ A Sbjct: 61 VRPQQPDVTEEIVGPSTKIAYK--DGVPTAAAEAFAKKAGVSLDALKTVTNAKGEYLGAD 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + R DV+ ++P I + W K+M W ++RPL+ +L +L Sbjct: 119 VHRAGRSASDVIVELLPKEIASIYWAKTMYWRAGKPE----RFVRPLQWLLALL-----D 169 Query: 173 EKIIDLDLKEIPCGNITYGHR-FHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +KI+ + GN T GHR H P+ ++ Y LE A VL E RR I Sbjct: 170 DKIVPVTWAGKTAGNTTRGHRVLHGAEPVVIEHPGQYRERLEAAKVLPHVEDRRYKIRKA 229 Query: 232 A-HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 H + + ED L++ + L EW V +G F+++YL LPEE++ ++ +QK F Sbjct: 230 LDHVMRTVPETRWREDHALVDAVTHLTEWPTVLIGKFEEEYLALPEEVLVTVMRDHQKYF 289 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSS 349 + G LA F+ V N QA + G I++ GN RV+ AR DA FW DQ Sbjct: 290 AVEDKSGKLAPYFLTVLNTQADEAGEHIIRHGNERVLRARFNDARFFWDYDQKIT----- 344 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-----I 404 L R+ +L +V F +G+ ++ R+R L + + I Sbjct: 345 ---------------LADRVEKLR--NVTFQKDLGSYFDKTERVRALAASLEAIAADRKI 387 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D +D A +L+K DL +E+V+EF ELQG +G YA Q + AI + KP Sbjct: 388 PVDTKALDEAALLAKTDLTSELVKEFTELQGIVGGLYARAQGHSEIAAIAIYDQYKPTSM 447 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 ++++P + I +S+ADK DT+ +A+ +P+GSKDP+ALRRA GI+R++ E K+ I Sbjct: 448 VDDLPRSTEGILLSIADKADTIGGMFALGLEPTGSKDPFALRRAANGIVRMLGEAKLPIT 507 Query: 525 LSQFI--------EDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDLIK 575 LS+ + FF +R++ YL + + +D+++A+L ++ + D + Sbjct: 508 LSEIATLATTDPETCSKVKGFFAERVEFYLREAKGQAYDVVKAVLAAGAED---VSDTLA 564 Query: 576 HLNEFFSSAKGEKFL---LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ E FL S KR+ IL+ K ++L E++L Sbjct: 565 RAEAVTAARGSEDFLAIAASFKRMANILSQARAKGDSAPFAAGKEFLTEPTERKLAEEAG 624 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + Y Q + + ++ ++ FFD V+V +D ++R RL LLQ + Sbjct: 625 RLAAWVDGLRRKQEYEQALEAIATLRPHVDAFFDSVMVMAEDEKIRRARLGLLQRV 680 >gi|237810904|ref|YP_002895355.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei MSHR346] gi|254181748|ref|ZP_04888345.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1655] gi|184212286|gb|EDU09329.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1655] gi|237504911|gb|ACQ97229.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei MSHR346] Length = 699 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 209/683 (30%), Positives = 336/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ--TIS 95 +Y TP RL + ++ + +PE+ + E++ P GA + L + G +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPERQVREKVLPVSVALDAQGAPSAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKAEAFFVNYAAPGATLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I G+ T GHRF + + ++ + Y L E+ Sbjct: 169 VRPVHRLTVL-----HGDRIVPVAAFGIDAGDTTLGHRFLSDGLVAIRHANAYADTLREK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 VL RR I A+A G ++V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVLAHFAQRRETIRTQLE--ANANGDQVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL +R+ L +VV+H K+G+Q RV R+ Sbjct: 341 FFFEQDKK--------------------KPLAERVPLL--ANVVYHNKLGSQLARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD + RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 TLAGEIAPAIGADATVAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDVAIA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CSEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + I FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVWLLRTAYERFAAVPGVAESTDAIHAFFIDRLRGLLRERGYTAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L L IV + + EF A+ E + KRI IL +K + + P Sbjct: 559 LSLNPTRLDDIVARLNAVREFTRLAEAEALAAANKRISNIL---KKSESGANGAVQPALF 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L +++ +Q ++ + Y L ++ P++ FFD V+VN DD +R Sbjct: 616 VEAAEKALAEQLAEVTPRVQSQLEARAYTGALTALAALRAPVDAFFDGVMVNADDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|320547918|ref|ZP_08042201.1| glycyl-tRNA synthetase beta subunit [Streptococcus equinus ATCC 9812] gi|320447458|gb|EFW88218.1| glycyl-tRNA synthetase beta subunit [Streptococcus equinus ATCC 9812] Length = 679 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 211/705 (29%), Positives = 351/705 (49%), Gaps = 92/705 (13%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLKEKRLAFEGIQTFSTPRRLAVRVLGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGL-TTDDIEFRE--VKGEEYVYVTKHETGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 DI-PEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H ++ S D Y DL + V+ D + R++ I+N + A + + Sbjct: 181 GRVSRGHRFLG-HETEIASADSYEEDLRKVFVIADAKERQDMIVNQIKAIEKAENVRVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDLDGNLMPNFIS 299 Query: 306 VSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 V N G +++GN +V+ ARLED FW+ DQ LK + L Sbjct: 300 VRN-----GNEKHIENVIKGNEKVLVARLEDGEFFWREDQK-------LKIADL------ 341 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRAIVLS 418 +A+LD +V FH KIG+ E +SR +V+ +A+ A + RA + Sbjct: 342 -------VAKLD--NVTFHEKIGSLSEHMSRSKVIATYLAEKAGASAEESKALARAAEIY 392 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF ELQG +G++YA+L E+ + AI EH P N+P K+ ++ Sbjct: 393 KFDLLTSMVGEFDELQGIMGEKYALLAGEDAAVAIAIREHYLPNSAEGNLPETKVGALLA 452 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I+ NL Sbjct: 453 LADKLDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELID--NLYALS 510 Query: 539 HDRLKLYLH----------------DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 D L Y H + + D+ EA+L N + ++++ + Sbjct: 511 FDSLT-YEHKAEVMDFIRARVEKMMSKSVSKDIKEAVLASSN---FVVAEMLEAADALVE 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQE 640 ++K E + + + + ++ + EK ++++ S L E EK L +D ++ Sbjct: 567 ASKAEGYKAAVESLSRVFNLAEKAQEGVAVDAS----LFENDEEKALAQAAADL--NLAG 620 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 S K L + I+ FFD +V VD+ V++NRL++L Sbjct: 621 SASDKLAQ-----LFVLSSVIDKFFDNTMVMVDNEAVKNNRLAIL 660 >gi|300768135|ref|ZP_07078040.1| glycyl-tRNA synthetase beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494199|gb|EFK29362.1| glycyl-tRNA synthetase beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 694 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 205/730 (28%), Positives = 355/730 (48%), Gaps = 73/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLEI EE+PA + + L ++ LK+ + +++++ + TP RL + + GL+ Sbjct: 5 YLLEIGLEEMPAHVVTPSVLQLKERMVKFLKDARLDFEDVKTFSTPRRLTVQVLGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +E GP G KA GF + G T D + KD K Sbjct: 65 ADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGAST--DDIVFKDVKGTPYVFVQTFTA 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +VL + I K+ +P M+WST +F +IRP++ I+ +L ++++ Sbjct: 123 GKTAAEVLAAGIEDVITKMNFPTMMKWST-----YSFKYIRPIRWIVSLL-----NDEVV 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + ++ G ++ GHRF H +++ + Y DL V+ D R+ I LA Sbjct: 173 PVQILDVAAGRVSRGHRFLG-HDVEIATAADYEADLASVQVIADAAKRKATIREQIAALA 231 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + ++ ++DLLEE+ LVE+ F G FD KYL +P+E++ +++ +Q+ F E Sbjct: 232 NERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYVTDAE 291 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L F+ V N +D + GN +V+ ARLEDA F+ DQ + S++E Sbjct: 292 DNLLPHFVSVRNGN-TDHLENVALGNQKVLTARLEDAAFFYHEDQQH-----SIQEYV-- 343 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDR 413 +R+ + V FH KIGT E++ R+ V+ +A L + + + R Sbjct: 344 ----------ERLKK-----VSFHDKIGTMYEKMQRVMVISDFLADRFGLTETEKNQLHR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G +YAVL+ E+ + AI EH P ++P +K+ Sbjct: 389 AAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLPKSKV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 +++ADK+D++ +F+A+ PSGS DP+ALRR GI+RI+ E D P+ Q D Sbjct: 449 GAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLEADIQ 508 Query: 532 ---------QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 NL F DR+K + ++R IR+D+I+ +++ ++ + Sbjct: 509 KELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIIDTVIKGSRQDIREMFKA 568 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 LN + + + + R+ +I A + K L + P EAE+ LY + + Sbjct: 569 ADVLNAHQDDPQFKDTIEAFTRLLRITA--KAKLAAGDLTVDPSLFENEAEQHLYDAVLE 626 Query: 634 FGTHIQESMDHK-RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 +M + R+ + L I + +F+Q +V D +VRDN L L I +I Sbjct: 627 LQKQFTPAMSMEDRFKALAALRPLIVD----YFEQTMVMSKDEKVRDNHLKQLLTIAQMI 682 Query: 693 LIVINVQKIV 702 ++ ++ +++ Sbjct: 683 NVMGDLNQLI 692 >gi|146309830|ref|YP_001174904.1| glycyl-tRNA synthetase subunit beta [Enterobacter sp. 638] gi|166980039|sp|A4W573|SYGB_ENT38 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145316706|gb|ABP58853.1| glycyl-tRNA synthetase beta chain [Enterobacter sp. 638] Length = 689 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 206/718 (28%), Positives = 333/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L G+ + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANVTAELDNAGLTHGKIEWFAAPRRLALKVANLAASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 ADREVEKRGPAISQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L ++ ++ K+P PK MRW S ++RP+ ++ +L + +I Sbjct: 124 GESAEALLPNMIATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDTVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYELRKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYAN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 DGKLLPNFIFVANIESKDP-IQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL V+F ++GT ++ RI L IA+ I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLSLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + D D I+A+L +K ++ F Sbjct: 511 YGDKLTNAKVVDEVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + ++ ++ L E L + ++ Sbjct: 571 RTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALALQVVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + E I+ FF++V+VNV+D+++R NRLS+L+ ++ + L V ++ Sbjct: 628 FFAEGRYQEALVELAELREVIDAFFEKVMVNVEDKDLRINRLSMLEKLRELFLRVADI 685 >gi|192359481|ref|YP_001980580.1| glycyl-tRNA synthetase subunit beta [Cellvibrio japonicus Ueda107] gi|190685646|gb|ACE83324.1| glycyl-tRNA synthetase, beta subunit [Cellvibrio japonicus Ueda107] Length = 692 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 207/727 (28%), Positives = 349/727 (48%), Gaps = 69/727 (9%) Query: 3 DFLLEIYSEEIPAR----MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 DFL+E+ +EE+P + + + AE + L L + + +++ Y P RL L ++ Sbjct: 4 DFLVELGTEELPPKNLKNLMNAFAESIQADLTAL----ELSFTSVKAYAAPRRLALLVEN 59 Query: 59 LSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ SP K GP + G KA F G+ S + + D K + Sbjct: 60 LASESPSKELVVWGPPAAIAFDKEGQPTKAALAFAEKNGI-AASALKAESDGKVEKLVAR 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++ +E +L+ +V A+ K+P K M+W + ++RP+ L +L D Sbjct: 119 LAQDGQKTVE-LLEKVVGDALAKLPIAKRMKWGSKRE-----EFVRPVH-WLVMLFGSD- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ + + G T GHRFH PI++ + Y L+ ++ R+AI+ D Sbjct: 171 ---VVSASVLGLTAGRTTRGHRFHYNQPIELANASDYASVLKNTGYVVADFAERSAIIKD 227 Query: 232 -AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A +G V D LL+E+ LVEW G F++++L +P E + ++K +QK F Sbjct: 228 QVEAEAKNIGGVAVIDPALLDEVTALVEWPVALTGQFEERFLAVPAEALIASMKEHQKYF 287 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L N FI V+N+Q+ D I+ GN RV+ RL DA F++ D+ L+SL Sbjct: 288 HVVDANGKLKNYFITVANLQSKDP-TQIIDGNERVIRPRLSDAAFFFETDKKT--TLASL 344 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 +E RL +VF A++GT ++ R+ L + IA + AD A Sbjct: 345 RE------------------RLKT--IVFQAQLGTIYQKTERVAKLAQFIAGKLKADEAS 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L K+DL T +V EF ++QG G YA+ EN A+ E PR + +P Sbjct: 385 AVRAAELCKSDLVTNMVGEFDDMQGIAGFYYALNDGENAEVAAAMNEQYMPRFAGDQLPA 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 ++LAD+LDT+ + I ++PSGSKDP+ALRRA++ ++R+++E + + L + + Sbjct: 445 TATGAIIALADRLDTISGIFGIGQQPSGSKDPFALRRASIAVLRLLVEKNLALDLRELLT 504 Query: 530 ----EDQNLIL----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + NL + + DR + D I ++ +A+ + L I + Sbjct: 505 FAKAQHNNLTVGEELVDQVLGYMLDRFRAMFEDAQIPAEVFQAVNAKQLSQPLDINQRVL 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +NEF + + + KR+ ILA K+N ++S ++P L EAEK L + Sbjct: 565 AVNEFSKLPQAQALAAANKRVSNILA---KQNADVSAAVNPALLQEEAEKNLAQAVGAKA 621 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + Y Q L + ++ FFD V+V DD ++ NRL+LLQ ++ + L V Sbjct: 622 AVVAPLFASREYTQALAALADLQPVVDAFFDNVMVMADDPALQQNRLALLQQLRGLFLEV 681 Query: 696 INVQKIV 702 ++ +V Sbjct: 682 ADISYLV 688 >gi|126172269|ref|YP_001048418.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS155] gi|166227924|sp|A3CYI6|SYGB_SHEB5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|125995474|gb|ABN59549.1| Glycine--tRNA ligase [Shewanella baltica OS155] Length = 689 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 211/699 (30%), Positives = 333/699 (47%), Gaps = 61/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANLTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKNLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLTDLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 293 DAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 334 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KPR + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPRFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L +Q Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLITKAQA 509 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q LL + E ++ FF+ V+V DD ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALK 665 >gi|312875593|ref|ZP_07735594.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2053A-b] gi|311088847|gb|EFQ47290.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2053A-b] Length = 689 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 216/731 (29%), Positives = 359/731 (49%), Gaps = 78/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKEIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E KI Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKI 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 176 LD-----IVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL + +L V FH KIG+ E++ R++ +G+ I + I+ +++A D Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKPIGEYIGKKINLSSSELADFD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT K Sbjct: 387 RAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++D Sbjct: 447 IGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDI 506 Query: 533 NLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F +R+K L + +D+I+ +L N+ I+ Sbjct: 507 IALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L E +K +K + S R+ IL +K + + +I+P +EK LY I+ Sbjct: 567 IADILQENHDDSKFKKVVESLTRVANIL---KKADFSEAGQINPDLFENNSEKALYDKIN 623 Query: 633 DFGTHIQESMDHKR-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +S+D K Y + L I E +FD ++ + V+ NRLS L+ I + Sbjct: 624 ---LLLDKSLDVKTLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|227115350|ref|ZP_03829006.1| glycyl-tRNA synthetase subunit beta [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 689 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 205/718 (28%), Positives = 331/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + ++ + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGDVSWFAAPRRLALKVARLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERLTTD--KGEWLLYRAHAK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L E++I Sbjct: 124 GEQAQTLLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL-----GEELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I GHRF + + + Y + L E V+ D + R+ I DA Sbjct: 174 PGQVLGIDSARTLRGHRFMGEAEFTIDNAEQYPQILLERGKVVADYDARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 SGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWVAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSSAVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E+ Sbjct: 451 ALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D I+A+L +K ++ F Sbjct: 511 YGDKLSNAKVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ ILA K ++ ++ L AE L + + Sbjct: 571 RSLDAAAALAAANKRVSNILA---KSTDTLNESVNAAVLKDAAEITLATHLVVLRDKLTP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V ++ Sbjct: 628 LFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQVADI 685 >gi|21905215|gb|AAM80078.1| putative glycyl-tRNA synthetase beta subunit [Streptococcus pyogenes MGAS315] Length = 650 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 202/686 (29%), Positives = 342/686 (49%), Gaps = 90/686 (13%) Query: 32 LLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKAIDG 84 L E + +++++ + TP RL + + GL+ + E+ GP G KA G Sbjct: 4 FLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGPAKKIALDADGNFSKAAQG 63 Query: 85 FLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIEDVLKTIVPVAIQKVPWPKS 140 F+R GL T + I+ KG+ Y+ V + KP + +VL + V + + +P S Sbjct: 64 FVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAK---EVLLGVTEV-LSAMTFPVS 116 Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 M W+ ++F +IRP+ ++ +L ++ ++LD +I G ++ GHRF Sbjct: 117 MHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHSGRVSRGHRFLGTETT 166 Query: 201 KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWV 260 + S D Y DL V+ D + R+ I+ + +A G+++ D DLL E++ LVE+ Sbjct: 167 -ITSADSYEADLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDIDADLLNEVLNLVEFP 225 Query: 261 QVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV--SNIQASDGGAAI 318 FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L F+ V N QA + + Sbjct: 226 TAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGHLMPNFVSVRNGNDQAIEN---V 282 Query: 319 VQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 ++GN +V+ ARLED FW+ DQ + +L +A+L +V Sbjct: 283 IKGNEKVLVARLEDGEFFWREDQKLQIADL---------------------VAKL--TNV 319 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLCTEIVREFPELQ 434 FH KIG+ E + R RV+ +A+ L +V VDRA + K DL T +V EF ELQ Sbjct: 320 TFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLLTGMVGEFDELQ 379 Query: 435 GKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINE 494 G +G++YA L E+ + AI EH P +P K+ ++LADKLDTL++F+++ Sbjct: 380 GIMGEKYARLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADKLDTLLSFFSVGL 439 Query: 495 KPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------------QNLILFFHD 540 PSGS DPYALRRAT GI+RI+ IP+ + ++ +++ F Sbjct: 440 IPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTYANKADVMNFIRA 499 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 R+ + + + D+ EA+L + + +++ ++ E + + + + + Sbjct: 500 RVD-KMMGKAVPKDIREAVLES---STFVVPEMLAAAEALVKASHTENYKPAVESLSRAF 555 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 + EK + S+ + P E E L+A I ++ Q+ + + P Sbjct: 556 NLAEKAD--ASVHVDPSLFENEQENTLFAAIQGL------TLAGSAAQQLEQVF--VLSP 605 Query: 661 -IEIFFDQVLVNVDDREVRDNRLSLL 685 I FFD +V +D+ +++NRL++L Sbjct: 606 VINDFFDNTMVMAEDQALKNNRLAIL 631 >gi|126451572|ref|YP_001064998.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 1106a] gi|242317286|ref|ZP_04816302.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106b] gi|126225214|gb|ABN88754.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106a] gi|242140525|gb|EES26927.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106b] Length = 699 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 209/683 (30%), Positives = 335/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ--TIS 95 +Y TP RL + ++ + +PE+ + E++ P GA + L + G +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPERQVREKVLPVSVALDAQGAPSAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKAEAFFVNYAAPGATLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I G+ T GHRF + + ++ + Y L E+ Sbjct: 169 VRPVHRLTVL-----HGDRIVPVAAFGIDAGDTTLGHRFLSDGLVAIRHANAYADTLREK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 VL RR I A+A G +V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVLAHFAQRRETIRTQLE--ANANGDRVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL +R+ L +VV+H K+G+Q RV R+ Sbjct: 341 FFFEQDKK--------------------KPLAERVPLL--ANVVYHNKLGSQLARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD + RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 TLAGEIAPAIGADATVAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDVAIA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CSEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + I FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVWLLRTAYERFAAVPGVAESTDAIHAFFIDRLRGLLRERGYTAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L L IV + + EF A+ E + KRI IL +K + + P Sbjct: 559 LSLNPTRLGDIVARLNAVREFTRLAEAEALAAANKRISNIL---KKSESGANGAVQPALF 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L +++ +Q ++ + Y L ++ P++ FFD V+VN DD +R Sbjct: 616 VEAAEKALAEQLAEVTPRVQSQLEARAYTGALTALAALRAPVDAFFDGVMVNADDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|255659369|ref|ZP_05404778.1| glycyl-tRNA synthetase, beta subunit [Mitsuokella multacida DSM 20544] gi|260848454|gb|EEX68461.1| glycyl-tRNA synthetase, beta subunit [Mitsuokella multacida DSM 20544] Length = 680 Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 218/736 (29%), Positives = 345/736 (46%), Gaps = 97/736 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EE+PA + L KE + ++ +R TP R L ++GL+ Sbjct: 4 DLLFEIGTEEVPAHVMPGTLAQLKENAEKAFKENRIAFKAVRTLGTPRRTALIVEGLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKK-----GDVYL 110 + E GP V G KA GF R + DPK G VY Sbjct: 64 QEDVASENRGPSVKIAFDAEGNPTKAAQGFARGQHV----------DPKDLVVKDGYVY- 112 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 A + + + +L+T++P + + +P +MRW F +IRP++ + + A+ Sbjct: 113 AEVHEEGQPTAKILETLLPELVCGLSFPNNMRWGNLD-----FKFIRPIRWFVALYGAD- 166 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I +L + G + GHRF + ++ Y + EE +++D + R+ I Sbjct: 167 ----VIPFELANVKSGRTSRGHRFLSQGDFEIADAKSYEKACEENFIIVDQDKRKQMIRE 222 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +A A G + +DLLEE++ LVE+ G F++KYL LP E + ++ +Q+ F Sbjct: 223 QIEAVAKANGGQAEITEDLLEEVLYLVEYPTALCGKFEEKYLQLPPEAVITPMRDHQRYF 282 Query: 291 VTRTREGVLANCFILVSNIQASDGGA----AIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 +T EG L FI V N GG + GN RV+ ARL DA F Sbjct: 283 PVKTAEGKLLPLFITVRN-----GGKEYLETVQHGNERVLRARLADAQFF---------- 327 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 F+ D K L++ +L VVF +GT E+ R+ L IA I A Sbjct: 328 ----------FDEDRKKTLEEHREKLKT--VVFQQGLGTMYEKTERLEKLADFIADAIGA 375 Query: 407 DVAL---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 D RA +LSKADL T +V EF ELQG +G+EYA L E AI+EH KPR Sbjct: 376 DEKAHKHARRAAILSKADLVTGMVTEFTELQGIMGREYAKLDGECEKVAIAIDEHYKPRF 435 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 ++ P VSLADK+DT++ +++ + P+GS+DP+ALRR LG++ +I+E K + Sbjct: 436 AGDSQPQTTAGRIVSLADKIDTIVGTFSLGKIPTGSQDPFALRRQALGLVNMIIEAKYHL 495 Query: 524 PLSQF---------IED--------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 LS IED Q++ F RLK L IR+D+++A+L + D+ Sbjct: 496 SLSAIVAKAMDLYGIEDEKARAKMQQDVADFIRLRLKNVLE--SIRYDVVDAVL-ADVDD 552 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + + K + ++ +S + + R+ + E S E+S +AE+ Sbjct: 553 IYAVALRAKAVADYVASTDAAAGIQAFVRVANLAKKAE------SAEVSADLFQTDAERN 606 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+A ++ + Y + L ++ PI+ FFD V+V D ++++NRL LL+ Sbjct: 607 LFAAYE----KASAAVASESYAEAITALAALAAPIDTFFDDVMVMDKDEKIKNNRLGLLK 662 Query: 687 YIKNIILIVINVQKIV 702 I ++ + + KIV Sbjct: 663 SIDQLVSRIADFTKIV 678 >gi|317165546|gb|ADV09087.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae TCDC-NG08107] Length = 687 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 210/660 (31%), Positives = 339/660 (51%), Gaps = 60/660 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQI 99 Y +P RL + +K + ++ + GP V G KA++GF R G + I D I Sbjct: 50 YASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGTPTKALEGFARGAGAK-IEDLTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 D ++ DVY + + + +L+ I+ A++K+P PK MRW + S F+++RP+ Sbjct: 109 IHDGRQ-DVYAYEYVQTGKPLGGLLENIINQAVKKLPIPKVMRWGS-----STFTFVRPV 162 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVL 218 ++ + + ++++ + + GN T GHRF + I +++ D Y + + V+ Sbjct: 163 HGLIVLHGGD-----VVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVV 217 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ AI A + + D+ LL+E+ LVEW V F++ +L +P+E Sbjct: 218 ASFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQEC 277 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT++ NQK F + G L N F+LVSN+Q ++ + I++GN RV+ ARL DA F+K Sbjct: 278 LILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQ-TENPSHIIRGNERVLRARLSDAEFFYK 336 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +DQ L+ R+ +L +VV+H KIG+Q ER+ R++ + Sbjct: 337 QDQ--------------------KATLESRLPKL--ANVVYHNKIGSQAERIERLQSIAA 374 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 IA+ + AD A RA L+KADL TE+V EFPELQG +GK YA L E +AIE+H Sbjct: 375 HIAKALGADAAAAGRAARLAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQH 434 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P +KI+ V+LADKL+TL+ W I P+G KDPYALRRA LGI+R++++ Sbjct: 435 YQPRFAGDKLPESKIAAAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQ 494 Query: 519 NKIDI-PLSQFIED---QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +D+ L Q D Q L+ F RL + L + D D++ A+L + Sbjct: 495 YGLDVNELIQTAFDSFPQGLLNEKTPSETADFMQARLAVLLQN-DYPQDIVAAVLAKQPR 553 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L + ++ + F + + KR+ +L KK ++ L + EK Sbjct: 554 RLDDLTAKLQAVAVFKQLPEAAALAAANKRVQNLL----KKADAALGAVNESLLQQDEEK 609 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA I ++ + L S+ ++ FFD V+V +D V+ NRL+LL Sbjct: 610 ALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLL 669 >gi|254556822|ref|YP_003063239.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum JDM1] gi|308180763|ref|YP_003924891.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045749|gb|ACT62542.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum JDM1] gi|308046254|gb|ADN98797.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum subsp. plantarum ST-III] Length = 694 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 204/730 (27%), Positives = 354/730 (48%), Gaps = 73/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLEI EE+PA + + L ++ LK+ + +++++ + TP RL + + GL+ Sbjct: 5 YLLEIGLEEMPAHVVTPSVLQLKERMVKFLKDARLDFEDVKTFSTPRRLTVQVLGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +E GP G KA GF + G T D + KD K Sbjct: 65 ADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGAST--DDIVFKDVKGTPYVFVQTFTA 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +VL + I K+ +P M+WST +F +IRP++ I+ +L ++++ Sbjct: 123 GKTAAEVLAAGIKDVITKMNFPTMMKWST-----YSFKYIRPIRWIVSLL-----DDEVV 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + ++ G ++ GHRF H +++ + Y DL V+ D R+ I LA Sbjct: 173 PVQILDVAAGRVSRGHRFLG-HDVEIATAADYEADLASVQVIADAAKRKATIREQIAALA 231 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + ++ ++DLLEE+ LVE+ F G FD KYL +P+E++ +++ +Q+ F E Sbjct: 232 NERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYVTDAE 291 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L F+ V N +D + GN +V+ ARLEDA F+ DQ + S++E Sbjct: 292 DNLLPHFVSVRNGN-TDHLENVALGNQKVLTARLEDAAFFYHEDQQH-----SIQEYV-- 343 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDR 413 +R+ + V FH KIGT E++ R+ V+ +A L + + + R Sbjct: 344 ----------ERLKK-----VSFHDKIGTMYEKMQRVMVISDFLADRFGLTETEKNQLHR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G +YAVL+ E+ + AI EH P ++P +K+ Sbjct: 389 AAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLPKSKV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 +++ADK+D++ +F+A+ PSGS DP+ALRR GI+RI+ E D P+ Q D Sbjct: 449 GAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLEADIQ 508 Query: 532 ---------QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 NL F DR+K + ++R IR+D+++ +++ ++ + Sbjct: 509 KELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIREMFKA 568 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 LN + + + + R+ +I A + K L + P EAE+ LY + + Sbjct: 569 ADVLNAHQDDPQFKDTIEAFTRLLRITA--KAKLAAGDLTVDPSLFENEAEQHLYDAVLE 626 Query: 634 FGTHIQESMD-HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 +M R+ + L I + +F+Q +V D +VRDN L L I +I Sbjct: 627 LQKQFTPAMSMEDRFKALAALRPLIVD----YFEQTMVMSKDEKVRDNHLKQLLTIAQMI 682 Query: 693 LIVINVQKIV 702 ++ ++ +++ Sbjct: 683 NVMGDLNQLI 692 >gi|315612872|ref|ZP_07887783.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis ATCC 49296] gi|315314982|gb|EFU63023.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis ATCC 49296] Length = 678 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 212/699 (30%), Positives = 352/699 (50%), Gaps = 81/699 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENHLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVGV-LKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 DRVSRGHRFLG-QETKIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A G +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNAEHLGN-VIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I +L +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSADGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-QNL---ILF 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I +++ I+ NL L Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMNELIDSLYNLKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + + K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLASSN---FVVADMLEAASALVEAGKKEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF---GTHIQESMDHKR 646 S + + + + EK E + + P E EK L + GT Q+ Sbjct: 573 KSSVESLSRAFNLAEKA--EGTDTVDPALFENEEEKALAEAVESLVLSGTASQQL----- 625 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + L ++ I+ FF+ +V D++++R NRL++L Sbjct: 626 -----EQLFALSPVIDAFFENTMVMTDNQDIRQNRLAIL 659 >gi|291615654|ref|YP_003518396.1| GlyS [Pantoea ananatis LMG 20103] gi|291150684|gb|ADD75268.1| GlyS [Pantoea ananatis LMG 20103] Length = 689 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 209/724 (28%), Positives = 341/724 (47%), Gaps = 73/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L + + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAEAFAAQVTAELDAANLNHGEVSWFAAPRRLALKIASLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP V G KA +G+ R G+ ++ D + VY A ++ Sbjct: 66 PDREVEKRGPAVAAAFDAEGNATKAAEGWARGNGITVEQAERLSTDKGEWLVYRAQVKG- 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW S ++RP+ ++ +L +++I Sbjct: 125 -EAAQALLPGMVATALSKLPVPKLMRWGD-----SDVQFVRPVHTVTLLL-----GDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + I + GHRF I +++ D Y LE+ V+ D + R+ I DA Sbjct: 174 PATILGIKSDRVIRGHRFMGESEITLENADQYPDVLEKRGQVIADYQVRKAMIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 234 ARRLGGVADLSDSLLEEVTSLVEWPVVLTATFEEKFLKVPSEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++SD I+ GN +VV RL DA F Sbjct: 294 GGNLLPNFIFVTNIESSDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F+ D K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV RA Sbjct: 334 -FDTDRKKRLEDHLPRLET--VLFQKELGSLRDKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSSPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPEN-DNLLTIVDLI 574 ++I F R + + + D ++A+L RP + D + V Sbjct: 511 YGSKLSNANAVNDVIDFMLGRFRSWYQEEGHSIDTLQAVLARRPTRPADFDARMKAVSHF 570 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+E + A KR+ ILA K ++ + L E +L ++ Sbjct: 571 RTLDEAAALAAAN------KRVSNILA---KSTEPLNDSVQASLLKENEEIQLATFVTAL 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + +Q RY L + E ++ FFD+V+VN +D VR NRL+LL ++ + L Sbjct: 622 SSKLQPYFAEGRYQDALIELAQLREAVDNFFDKVMVNAEDEAVRINRLTLLSKLRELFLQ 681 Query: 695 VINV 698 V ++ Sbjct: 682 VADI 685 >gi|325956925|ref|YP_004292337.1| glycyl-tRNA synthetase subunit beta [Lactobacillus acidophilus 30SC] gi|325333490|gb|ADZ07398.1| glycyl-tRNA synthetase subunit beta [Lactobacillus acidophilus 30SC] Length = 687 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 211/719 (29%), Positives = 348/719 (48%), Gaps = 90/719 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFATPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + + K Sbjct: 121 KEGKKATDILLGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGGDVVPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y L++ V+ + E R++ I+N + Sbjct: 175 ILD-----ITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQMNE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVKENHWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRN-GNKDYLDNVISGNEKVLVARLDDAQFFYDEDR------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 335 -------KYPLSHFVDRLK--NVSFHDKIGSVAEKMQRVRMIGDYLAKRWDLPENVVKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P GPL Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 I-------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + DQ + F DR+K YL + ++D+++A+L + Sbjct: 503 LPEIINMLNGVTPAKLPKGDADQEIADFIRDRVKQYLQKNNFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL +K + +++I+ +EK LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRIDNIL---KKAKFKGNVKIAESLFDDNSEKELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLL 685 + + ++ + DL + I+ +FD ++ D +V++NRL+ L Sbjct: 620 GVENL----------QKVESLADLYQGFVQLQPVIDQYFDANMIMAKDEKVKNNRLAQL 668 >gi|186475174|ref|YP_001856644.1| glycyl-tRNA synthetase subunit beta [Burkholderia phymatum STM815] gi|184191633|gb|ACC69598.1| glycyl-tRNA synthetase, beta subunit [Burkholderia phymatum STM815] Length = 699 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 213/684 (31%), Positives = 339/684 (49%), Gaps = 63/684 (9%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ--TIS 95 +Y TP RL + LK + +PEK + E++ P G + L + G +++ Sbjct: 52 RYATPRRLAVTLKNVRNVAPEKHVREKVLPVSVALDANGQPTPPLAKKLAALGFPDFSVN 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + + L+ + + K+P PK M + S + Sbjct: 112 DLERAND-GKAEAFFLRYAAPGATLAEGLQAALDETLAKLPIPKVMTYQRPDG--SNVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I + T GHRF + +++Q DHY L + Sbjct: 169 VRPVHRLTVL-----HDKEIVPVTAFGIDADDTTLGHRFLSEGFVQIQHADHYAETLVHK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+ + R+ AI H LA A G ++V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GKVVPNFADRKEAIRT--HLLAQANGDQVVMPESLLDEVTSLVEWPVVYACEFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDANGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ +PL R+ +L +VV+H K+G+ +RV R+ Sbjct: 341 FFFEQDKK--------------------RPLADRVPQL--ANVVYHNKLGSALQRVERVE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L IA +I ADVAL R LSKADL T++V EFPELQG +G YA E A Sbjct: 379 ALAGAIAAMIGADVALAKRGAHLSKADLLTDMVGEFPELQGTMGTYYARHDGEPEEVALA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +P+ V+LADKL+TL+ W I +P+G KDP+ALRR LG++R Sbjct: 439 CSEHYQPRFSGDALPSTATGTVVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPL--------SQFI-------EDQNLILFFHDRLKLYLHDRDIRHDLIEAI 559 I++E ++ I L +QF Q + F DRL+ L +R ++A+ Sbjct: 499 ILVEKQLPIDLVELLRAANAQFTNVPNVTDSTQAIYEFCIDRLRGQLRERGYSAGEVDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L IV ++ + EF + A+ + KRI IL KK+ S L Sbjct: 559 LALNPTRFDDIVARLEAVREFAALAEAASLAAANKRISNIL----KKSEAASANGVQITL 614 Query: 620 LLE-AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 L+E AEK L+A + +Q + Y L ++ EP++ FF+ V+VN +D +R Sbjct: 615 LIEAAEKALHAQLEQVAPRVQSQLAEGEYTGALSALAALREPVDTFFNDVMVNAEDPALR 674 Query: 679 DNRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ ++ Sbjct: 675 ANRLALLGALHQQMNCVADISRLA 698 >gi|307705200|ref|ZP_07642070.1| glycyl-tRNA synthetase beta chain [Streptococcus mitis SK597] gi|307621222|gb|EFO00289.1| glycyl-tRNA synthetase beta chain [Streptococcus mitis SK597] Length = 678 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 211/699 (30%), Positives = 351/699 (50%), Gaps = 75/699 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLG-QETKIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVHIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQL-IDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL + A L +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQIAVLLAEKADLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L E + AI EH P +P K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYALLAGETPAVATAIREHYMPTSAEGELPETKVGAILAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALTFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + ++K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEASKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E++ + P E EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA-EEVAT-VDPALFENEEEKTLAEAVESLVLSGTASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L ++ I+ FF+ +V + VR NRL++L ++ Sbjct: 628 ----LFALSPVIDAFFENTMVMAESEAVRQNRLAILSHL 662 >gi|167892900|ref|ZP_02480302.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 7894] Length = 699 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 209/683 (30%), Positives = 335/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ--TIS 95 +Y TP RL + ++ + +PE+ + ++ P GA + L + G +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPERQVRGKVLPVSVALDAQGAPSAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKAEAFFVNYAAPGATLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I G+ T GHRF + + ++ + Y L E+ Sbjct: 169 VRPVHRLTVL-----HGDRIVPVAAFGIDAGDTTLGHRFLSDGLVAIRHANAYADTLREK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 VL RR I A+A G ++V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVLAHFAQRRETIRTQLE--ANANGDQVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL +R+ L +VV+H K+G+Q RV R+ Sbjct: 341 FFFEQDKK--------------------KPLAERVPLL--ANVVYHNKLGSQLARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD + RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 TLAGEIAPAIGADATVAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDVAIA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CSEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + I FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVWLLRTAYERFAAVPGVAESTDAIHAFFIDRLRGLLRERGYTAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L L IV + + EF A+ E + KRI IL +K + + P Sbjct: 559 LSLNPTRLDDIVARLNAVREFTRLAEAEALAAANKRISNIL---KKSESGANGAVQPALF 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L ++D +Q ++ + Y L ++ P++ FFD V+VN DD +R Sbjct: 616 VEAAEKALAEQLADVTPRVQSQLEARAYTGALTALAALRAPVDAFFDGVMVNADDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|120596839|ref|YP_961413.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. W3-18-1] gi|166227929|sp|A1RDW4|SYGB_SHESW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120556932|gb|ABM22859.1| Glycine--tRNA ligase [Shewanella sp. W3-18-1] Length = 689 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 212/703 (30%), Positives = 335/703 (47%), Gaps = 69/703 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 293 DAGKLLPNFIFVANIESKDP-AQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 334 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----- 529 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 530 ----------EDQNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPEN-DNLLTIVDLIKH 576 ++ F R + + D+ I D+I A+L RP + + ++ + H Sbjct: 510 LHGTHLSNVNASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 577 LNEFFSSAKGEKFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 F S + L +A KR+ ILA K + I L AE+ L A +++ Sbjct: 570 ----FRSLEASGALAAANKRVSNILA---KVEGALPTTIDASLLTEAAEQALAAKLNELQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + + Y Q LL + E ++ FF+ V+V DD ++ Sbjct: 623 PQLAPLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALK 665 >gi|89895829|ref|YP_519316.1| hypothetical protein DSY3083 [Desulfitobacterium hafniense Y51] gi|123397647|sp|Q24SX0|SYGB_DESHY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|89335277|dbj|BAE84872.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 690 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 207/713 (29%), Positives = 341/713 (47%), Gaps = 73/713 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI +EEIPA+ L +E + YQ+++ Y TP R + ++GL+ Sbjct: 4 DFLLEIGTEEIPAKFAPGVLNQLREQAQKHCQELRLDYQDLKVYTTPRRFAVLIQGLAEK 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V A KA GF R G++ D +++ VY Sbjct: 64 QTDFTAEVKGPAVKAAYDAEGNPTKAAQGFARGQGVEP-KDLFVQELNGVSYVYARKFEL 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L + I + +PK MRW+ F + RP++ I+ + +E + Sbjct: 123 GQPTLQ-LLPKLCTDLITGLHFPKPMRWADLE-----FRFARPIRWIVALFGSE-----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + G + GHR P+ + S Y + + +A V++DPE RR ++ H L Sbjct: 172 IPFEFVGLASGKASRGHRTLG-GPVTLDSPADYEKQMLQAFVMVDPEQRRQSVWEQIHAL 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ VG ++ +D DLL+E+ ++E+ +G Y+ LPE +I +K +Q+ F R + Sbjct: 231 AAKVGGDVEKDDDLLDEVTHIIEYPTALLGEVAPNYMHLPEPVITTPMKEHQRYFPVRDK 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V N D A V+ GN +V+ ARLEDA +++ DQ Sbjct: 291 EGKLLPYFITVRN--GDDHALAKVKAGNEKVLKARLEDAAFYYREDQKT----------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LV 411 PL + + +LD V +H K+G+ +RV RIR L + IA + + LV Sbjct: 338 ---------PLAELVEKLD--KVTYHEKLGSVRQRVERIRTLARGIAARLGMESKKQDLV 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +R +L+KADL T +V +FPELQG +G +YA + E C I EH +PR + +P + Sbjct: 387 ERTALLAKADLVTLMVYDFPELQGIMGADYARMVGEKPEVCTGILEHYQPRFAGDELPQS 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 VS+ADKLD ++ + I +P+GS+DPYALRR G++ IILE DI L Q I Sbjct: 447 YTGQIVSVADKLDAIVGAFGIGIQPTGSQDPYALRRQAQGVVGIILEAGWDISLEQLIAA 506 Query: 530 -----EDQNLIL------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +Q + L FF RL+ L ++ R+D ++A+L ++ I Sbjct: 507 SYVNFAEQGISLLPLADLQSALQDFFQQRLRFVLQEQGARYDTLDAVLAQGSNQ---ITR 563 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + + + +F+ ++ + L + +K + + P+ L+ E L A + Sbjct: 564 AARKAQVLAAKRETTEFVPYSQAYIRCLNLSKKAQTQ---PLDPKNLIDPTEIALAAALV 620 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ Y + L + IE F+ V++ V+D ++ RL+LL Sbjct: 621 QRQEAFAALIEKGDYAEAYALASELIPMIEALFNAVMIMVEDEILKQARLALL 673 >gi|146291117|ref|YP_001181541.1| glycyl-tRNA synthetase subunit beta [Shewanella putrefaciens CN-32] gi|166227927|sp|A4Y1A9|SYGB_SHEPC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145562807|gb|ABP73742.1| Glycine--tRNA ligase [Shewanella putrefaciens CN-32] Length = 689 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 211/703 (30%), Positives = 335/703 (47%), Gaps = 69/703 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 293 NAGKLLPNFIFVANIESKDP-AQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 334 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----- 529 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 530 ----------EDQNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPEN-DNLLTIVDLIKH 576 ++ F R + + D+ I D+I A+L RP + + ++ + H Sbjct: 510 LHGTHLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 577 LNEFFSSAKGEKFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 F S + L +A KR+ ILA K + I L AE+ L A +++ Sbjct: 570 ----FRSLEASGALAAANKRVSNILA---KVEGALPTTIDASLLTEAAEQALAAKLNELQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + + Y Q LL + E ++ FF+ V+V DD ++ Sbjct: 623 PQLAPLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALK 665 >gi|300871578|ref|YP_003786451.1| glycyl tRNA synthetase subunit beta [Brachyspira pilosicoli 95/1000] gi|300689279|gb|ADK31950.1| glycyl tRNA synthetase beta subunit [Brachyspira pilosicoli 95/1000] Length = 695 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 208/747 (27%), Positives = 364/747 (48%), Gaps = 98/747 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI EEIPA + A+ I+ LK G+ ++++ Y TP RL + ++ + Sbjct: 1 MKDLLIEILVEEIPADFAYPASMSFKKIMEDTLKNNGISFKSIIAYTTPRRLSVLVEEVE 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKK-------GD 107 S ++I E GP + G+ KA +GFL+S + I + K+D K G Sbjct: 61 EKSKDEIVESRGPLLESAIKDGSLTKAGEGFLKSHNIDNIKNIDEKEDFNKAYIKEVGGK 120 Query: 108 VYLAVLRK-----PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSI 162 YL V ++ K+L E+VL+ IV K+ + K MRW F+++RP++++ Sbjct: 121 KYLFVKKEKKGVDTKKLFEEVLEDIV----SKIDFKKKMRWGNKD-----FAFVRPIRNV 171 Query: 163 LCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPE 222 L + E +I + I N GHR +P ++ + Y + L E V++ E Sbjct: 172 LALFGNE-----VIKTTVAGIETNNKVTGHRLLSPEFKEINNPKDYEKTLAEKHVIVSRE 226 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 R I+ ++ +G E V K + E ++ LVE + FD K+L +P+E++ Sbjct: 227 KRLENIVAQLEKIEKELGFEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLTSE 286 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + +QK F ++G L N F++ +N + I+ GN RV+ ARL D ++ D Sbjct: 287 MIEHQKYFPLCKKDGSLTNIFVITANQPKT---PQIIAGNIRVLTARLSDGRFLYQED-- 341 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 + K +D+ RL ML +F ++G+ ++V R+ + + + Sbjct: 342 ------------------IRKGMDEMNERLQML--MFRKELGSVADKVKRLEKNSELLIK 381 Query: 403 LI--DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 L+ D D + +AI K+DL + +V FPELQG +G +A N N AI E + Sbjct: 382 LLGYDKDKENILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKSMNLNDDVALAINEQYR 441 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +N+P+N +++ DK+D ++ + + + P+GS+DP ALRR LGI+ I++++K Sbjct: 442 PLFATDNIPSNDTGKAIAILDKMDNIVAGFYVADIPTGSQDPNALRRQALGIVNILIKSK 501 Query: 521 IDIPLSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + L + IED ++ FF R + +D D D + +L Sbjct: 502 KHVNLKKLIEDSINSMPKDARVNKSNDLLNDIFEFFKSRFE---NDIDFAKDSVAGVLST 558 Query: 563 ENDNL------LTIVDLIKHLN-EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 D++ + +D + N E FS+ LL KR+ ++ K +E++L+ S Sbjct: 559 GIDDMYDAYLKIEAIDAFRKKNEELFSN-----LLLVFKRVKNMI----KSAKEVNLDES 609 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 L EAEK LY + + + + M+ + Y + LL S+ EP++ FF ++VNVDD Sbjct: 610 --LLKEEAEKSLYNIYKEKLNEVNKLMEKREYEKTFALLASLYEPLDKFFKDIMVNVDDE 667 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKIV 702 ++++NR++LL + I +++ +V Sbjct: 668 KIKNNRIALLSSVDKIFKNMLDFSSLV 694 >gi|226311657|ref|YP_002771551.1| glycyl-tRNA synthetase beta chain [Brevibacillus brevis NBRC 100599] gi|226094605|dbj|BAH43047.1| glycyl-tRNA synthetase beta chain [Brevibacillus brevis NBRC 100599] Length = 689 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 205/729 (28%), Positives = 353/729 (48%), Gaps = 75/729 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ EE+PAR +AA + L E V + + TP R L + GL+ Sbjct: 5 DLLVEVGLEEMPARFVAQAAAQFKEKVEKWLTAERVPFDQITALETPRRFALLINGLAEK 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ +E GP G KA GF RS ++ D K+ + A + Sbjct: 65 QPDRNDEAKGPARKIAQDEAGNWSKAALGFARSNNVE--PDQLYYKEVNGIEYVHARKSE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L + V I + +PK+MRW ++RP++ ++ + +++ Sbjct: 123 AGKPTTELLPQLAEV-ITGMSFPKNMRWGARE-----LKYVRPIRWLVALF-----GDEL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 IDL++ + G ++ GHRF + + Y+ L E V++ P+ RR I+ HRL Sbjct: 172 IDLEIAGVKSGRVSRGHRFLGTE-VTLNHPSEYVSKLAEQYVMVKPDERRATIVEQIHRL 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G + D+ LL+E++ LVE+ G+F++++L +P E++ +++ +Q+ F Sbjct: 231 EKENGWTIPMDEGLLDEVVHLVEYPTALYGTFEQEFLSIPREVLVTSMREHQRYFPVENA 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N F+ V N S + +GN +V+ ARL DA F+ DQ LS ES L Sbjct: 291 QGQLLNHFVTVRNGD-SRALENVAKGNEKVLRARLSDARFFYVEDQK----LSI--ESCL 343 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVD 412 K RL+ +V+H ++GT G++V R+R +IA + + VD Sbjct: 344 K--------------RLET--IVYHEELGTIGDKVRRVRKTAAQIASKLGVSAEETKQVD 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R ++K DL T +V EFPELQG +G++YA E+ + EH PR + +P + Sbjct: 388 RIAEIAKFDLVTNMVGEFPELQGIMGEDYARKAGESDVVASGVFEHYLPRFAGDKMPASA 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---- 528 VSLADK+DT++ ++I P+GS+DPY LRR GI+ I++E I L+ Sbjct: 448 QGAIVSLADKMDTIVGCFSIGIVPTGSQDPYGLRRMAAGIVTILVERDWQISLADLWDAA 507 Query: 529 -------------IED--QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ED ++L+ FF RLK L D +R+D+I+A+L +L + ++ Sbjct: 508 MEGYVAQGVNKRAAEDVKKDLVDFFALRLKNVLQDHGVRYDVIDAVLAA---DLTLVPEV 564 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + + + E+F L ++ ++ + +K + ++S + E+ LY Sbjct: 565 LAKAKALMGAVQTEEFKLIVEQFNRVNNLAQKAEAD---QVSEALFAEDVERALYQAFQA 621 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ D ++ + L ++ +PI FFD+V+V +D+ VR NRL LL + ++ Sbjct: 622 VQKDVEGLKDQEK---VLATLSTLRQPINAFFDKVMVMAEDQAVRANRLGLLLQLSRVLY 678 Query: 694 IVINVQKIV 702 + KIV Sbjct: 679 RYADFSKIV 687 >gi|292490092|ref|YP_003532987.1| glycyl-tRNA synthetase subunit beta [Erwinia amylovora CFBP1430] gi|292901099|ref|YP_003540468.1| glycine-tRNA synthetase subunit beta [Erwinia amylovora ATCC 49946] gi|291200947|emb|CBJ48086.1| glycine-tRNA synthetase, beta subunit [Erwinia amylovora ATCC 49946] gi|291555534|emb|CBA24085.1| Glycyl-tRNA synthetase, beta subunit [Erwinia amylovora CFBP1430] gi|312174286|emb|CBX82539.1| Glycyl-tRNA synthetase, beta subunit [Erwinia amylovora ATCC BAA-2158] Length = 689 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 202/718 (28%), Positives = 334/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L L G+ + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANLTAELDAAGLAHGEVSWFAAPRRLALKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ + R Sbjct: 66 PDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLMYRARVT 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++ ++ K+P PK MRW S ++RP+ ++ +L +++I Sbjct: 124 GERTQALLPAMIANSLTKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL-----GDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 ++ + + GHRF + D Y + L E V D R+ I DA Sbjct: 174 PANILGVDSARVIRGHRFMGEPAFTIDHADQYPQILLERGKVQADYAARKATIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 234 AAKIGGVADLNDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D + L+ + RL+ V+F ++GT + RI+ L +A I ADV RA Sbjct: 334 -FNSDRKRRLEDNLPRLET--VLFQKELGTLRAKTDRIQALSGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDVLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLSEEAVRL 510 Query: 533 ------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + + D ++A+L +K ++ F Sbjct: 511 YGNKLSNAKAVDEVIDFMLGRFRAWYQEEGHSVDTLQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K ++ + L E +L ++ + +Q Sbjct: 571 RTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALSSKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + E ++ FFD+V+VN +++EVR NRL+LL ++ + L V ++ Sbjct: 628 FFAEGRYQEALIELAQLREAVDNFFDKVMVNAEEKEVRINRLTLLAKLRELFLQVADI 685 >gi|322374599|ref|ZP_08049113.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C300] gi|321280099|gb|EFX57138.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C300] Length = 678 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 211/699 (30%), Positives = 350/699 (50%), Gaps = 81/699 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLG-QETKIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDSKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLM--ISELVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 V FH KIG+ E R +I +L +K +D V L RA + K D Sbjct: 347 ----------HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTAAEGELPESKVGAILAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYSLKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + ++K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLASSN---FVVADMLEAASALVEASKKEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF---GTHIQESMDHKR 646 S + + + + EK E + + P E EK L + GT Q+ Sbjct: 573 KSSVESLSRAFNLAEKA--EGTDTVDPALFENEEEKALAEAVESLVLSGTASQQL----- 625 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 626 -----EQLFALSPVIDAFFENTMVMAEDQTVRQNRLAIL 659 >gi|115379224|ref|ZP_01466340.1| glycyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|310822232|ref|YP_003954590.1| glycyl-tRNA synthetase subunit beta [Stigmatella aurantiaca DW4/3-1] gi|115363756|gb|EAU62875.1| glycyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|309395304|gb|ADO72763.1| Glycyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 703 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 205/730 (28%), Positives = 351/730 (48%), Gaps = 69/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLE+ +EEIPA A EDL I+ L E + + +R Y TP RL +++K ++ Sbjct: 4 DLLLEVGAEEIPASFIGPALEDLQRIITTRLAEGRLKHGEVRTYGTPRRLAVWVKDVADA 63 Query: 63 SPEKIEERLGPRVGA-----GKKAIDGFLRSTGLQ-TISDCQIKKDPKKGDVYLAVLRKP 116 + E+LGP A GK + + L+ +S+ + PK G+ A +++ Sbjct: 64 GEDVTSEKLGPSAKAAFDKEGKPTVAATKFAESLKIPVSELGRTQTPK-GEYLSARVQEK 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++ A+ + + KSMRW ++ RP++ I+ +L + ++ Sbjct: 123 GRPAAELLPEVLHAAVHGINFRKSMRWGDVD-----LAFARPVQWIVALLGGD-----VL 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + ++ G T+GHRF +P I++ Y LE+A V+ D RR +L +A Sbjct: 173 PVVFGDVKSGRTTHGHRFLSPGAIELARPADYEAVLEKAHVVPDIAKRRAMLLQKVRAVA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G +L+ED+ L++++ LVE +G+FD ++L LP E++ +K++Q+ F + Sbjct: 233 QGTGGQLLEDEALVDQVTNLVELPSPVVGTFDARHLDLPSEVLVQEMKSHQRYFSLTDAQ 292 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI VSN D ++ +G RV+ +RL D F Sbjct: 293 GKLLPKFIAVSNTPVKDETLSL-RGYERVLRSRLADGRFF-------------------- 331 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 F+ D PL+ R+ +L VV+ ++G+ E+V R R L +A+ + + RA Sbjct: 332 FDEDRKAPLEGRVEKLSR--VVWQGQLGSYAEKVERFRTLAVWLAEQTGKNEHSTTIQRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+KADL T +V EFPELQG +G+EYA E + AI EH PR + +P+ Sbjct: 390 ATLAKADLVTGMVGEFPELQGVMGREYARAGGEPEAVALAIFEHYLPRNANDALPSQDPG 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + LAD+LD+L +AI + P+G+ DP+ LRRA L II I+ LS + + Sbjct: 450 ALIGLADRLDSLCGIFAIGKAPTGAADPFGLRRACLAIINIVFGRGYRFSLSAAVGEALR 509 Query: 532 -------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ FF RLK L + R D++EA+L D+L+ Sbjct: 510 LLSPKIANVKRKAGEPEPREQILEFFRGRLKA-LWSENYRTDVVEAVLAVGFDDLVAARK 568 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL-EISPQYLLLEAEKRLYAVI 631 ++ L+ A ++ KR+ I+ EK+ ++++ + +P L E EK L++ Sbjct: 569 RLEALSGIVGRADFTPLAVAFKRVVNIV---EKQGKDVARGQTNPDKLRDEPEKNLHSAF 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + + + + + ++ FFD+V V +D E+R+NR+ L I + Sbjct: 626 TQARGKVAQYVQADDFSSALKEITGLKPAVDTFFDKVTVMAEDPELRENRVRFLTEIGAL 685 Query: 692 ILIVINVQKI 701 V + KI Sbjct: 686 FNQVADFSKI 695 >gi|76811609|ref|YP_332294.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 1710b] gi|134279466|ref|ZP_01766178.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 305] gi|167901385|ref|ZP_02488590.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei NCTC 13177] gi|254196673|ref|ZP_04903097.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei S13] gi|254261736|ref|ZP_04952790.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710a] gi|76581062|gb|ABA50537.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710b] gi|134248666|gb|EBA48748.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 305] gi|169653416|gb|EDS86109.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei S13] gi|254220425|gb|EET09809.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710a] Length = 699 Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 209/683 (30%), Positives = 335/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ--TIS 95 +Y TP RL + ++ + +PE+ + E++ P GA + L + G +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPERQVREKVLPVSVALDAQGAPSAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKAEAFFVNYAAPGATLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I G+ T GHRF + + ++ + Y L E+ Sbjct: 169 VRPVHRLTVL-----HGDRIVPVAAFGIDAGDTTLGHRFLSDGLVAIRHANAYADTLREK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 VL RR I A+A G +V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVLAHFAQRRETIRTQLE--ANANGDRVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL +R+ L +VV+H K+G+Q RV R+ Sbjct: 341 FFFEQDKK--------------------KPLAERVPLL--ANVVYHNKLGSQLARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD + RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 TLAGEIAPAIGADATVAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDVAIA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CSEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + I FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVWLLRTAYERFAAVPGVAESTDAIHAFFIDRLRGLLRERGYTAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L L IV + + EF A+ E + KRI IL +K + + P Sbjct: 559 LSLNPTRLDDIVARLNAVREFTRLAEAEALAAANKRISNIL---KKSESGANGAVQPALF 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L +++ +Q ++ + Y L ++ P++ FFD V+VN DD +R Sbjct: 616 VEAAEKALAEQLAEVTPRVQSQLEARAYTGALTALAALRAPVDAFFDGVMVNADDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|309388941|gb|ADO76821.1| glycyl-tRNA synthetase, beta subunit [Halanaerobium praevalens DSM 2228] Length = 687 Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 222/734 (30%), Positives = 359/734 (48%), Gaps = 86/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + + E+ +EE+PA + ED + + + Y+ + Y TP RL L ++ L+ Sbjct: 4 NLIFEVGTEEMPAASMQRFREDYLQTAATIFENNNLEYEEINVYSTPRRLVLAIEALAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G +A +GF + GL+ +SD KKD G +Y + K Sbjct: 64 QTDNKEIVRGPAVNIAFDADGNPTRAGEGFAKGQGLE-VSDL-TKKD---GYLYAEKITK 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L I+ I+ VP PK+MRW + +IRP+K +L + +E Sbjct: 119 GQN-TANILAGILTQLIKNVPLPKAMRWGSVK-----MEFIRPIKWLLALFGSEK----- 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+L+L I N + GHRF + ++++ D Y LE A V++ + R I +L Sbjct: 168 IELELAGIKSSNYSIGHRFLSEGHLEIKEADAYFSTLENASVIVKQKQREEKIRKQIEKL 227 Query: 236 ---ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ASA L++D LL E+I L+E+ F GSFD YL LP E++ ++ +Q+ F Sbjct: 228 DLSASA----LIKD-SLLTEVIDLIEFPTAFKGSFDSSYLKLPAEVLITAMEKHQRYFPV 282 Query: 293 RTREGVLANCFILVSNIQASDGGA----AIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 +++G L + FI V DGG+ ++ GN V+ RL+DA F+ DQ Sbjct: 283 VSQKGELKSEFIGVR-----DGGSDFIKEVISGNEMVLKGRLDDAQFFFAEDQ------- 330 Query: 349 SLKESALKFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 K+ + R + + D+VF IG+ E+V ++ + +A + Sbjct: 331 -------KYGF---------LNRTENIKDIVFQKDIGSVYEKVQKLEKITANLADTLAYT 374 Query: 408 VALVDRAIVLSKA---DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 A +K DL TE+V EF LQG +GKEYA+L E AI EH PR Sbjct: 375 AETKKMAKKAAKLAKNDLATEMVNEFSNLQGLMGKEYALLAGEAAETATAIFEHYLPRFA 434 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P K +++A+KL L + + +N PSGS+DP+ALRR G++RIILENK++I Sbjct: 435 GDKLPETKSGTILAMAEKLFNLSSHFLLNNIPSGSQDPFALRRQATGLVRIILENKLEIN 494 Query: 525 LSQFIEDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + Q I I+ F RL+ L + +IR+D+I A+++ N NL Sbjct: 495 IEQLIHSSMKIVAINLEQIDSTAAKLKEFILQRLENLLAEENIRYDIINAVIKVNNHNLF 554 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + L E F + + F+ + + ++ I EK E LE L+ EK+LY Sbjct: 555 DLYQRAHKLME-FRNEDSKLFVDLVRGLVRVKNISEKA--ENKLEFDAGLLVENEEKKLY 611 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T I+E +Y + LL + I+ F D V+V VDD+++++NRL+LL I Sbjct: 612 KDLKTRKTKIKELFSSAKYKKGLYLLVELKPAIDQFLDNVMVMVDDQKIKNNRLALLGSI 671 Query: 689 KNIILIVINVQKIV 702 ++ VI++++I Sbjct: 672 TPLVAKVIDIEEIA 685 >gi|188535522|ref|YP_001909319.1| glycyl-tRNA synthetase subunit beta [Erwinia tasmaniensis Et1/99] gi|238689720|sp|B2VCH1|SYGB_ERWT9 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|188030564|emb|CAO98459.1| Glycyl-tRNA synthetase beta chain [Erwinia tasmaniensis Et1/99] Length = 689 Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 203/718 (28%), Positives = 333/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L L G+ + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANLTAELDAAGLAHGEVSWFAAPRRLALKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ + R Sbjct: 66 PDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLMYRARVT 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++ ++ K+P PK MRW S ++RP+ ++ +L +++I Sbjct: 124 GERTQVLLPAMIATSLAKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL-----GDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 ++ I I GHRF + D Y + L E V D R+ I DA Sbjct: 174 PANILGIDSARIIRGHRFMGEPEFTIDHADQYPQILLERGKVQADYAARKAIIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F + Sbjct: 234 AAKIGGVADLSDSLLEEVTSLVEWPVVLTATFEEKFLAVPAEALVYTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D + L+ + RL+ V+F ++GT + RI+ L +A I ADV RA Sbjct: 334 -FNSDRKRRLEDNLPRLET--VLFQKELGTLRAKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 533 ------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R + + + D ++A+L +K ++ F Sbjct: 511 YGSKLSNAKAVDEVVDFMLGRFRTWYQEEGHSVDTLQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K ++ + L E +L ++ + +Q Sbjct: 571 RTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALSSKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + E ++ FFD+V+VN +++EVR NRL+LL ++ + L V ++ Sbjct: 628 FFAEGRYQDALIELAQLREAVDNFFDKVMVNAEEKEVRINRLTLLAKLRELFLQVADI 685 >gi|322391031|ref|ZP_08064535.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 903] gi|321142261|gb|EFX37735.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 903] Length = 704 Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 210/697 (30%), Positives = 354/697 (50%), Gaps = 77/697 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 41 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 100 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + ++VL Sbjct: 101 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKPAKEVLA 157 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ + F +IRP+ +++ +L ++ +DLD +I Sbjct: 158 G-VPEVLASLTFPVSMHWAN-----NTFEYIRPVHTLIVLL-----GDEALDLDFLDIHS 206 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 207 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEADQGVQVQI 265 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 266 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGQLKPNFIS 325 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ LK DL L Sbjct: 326 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQK------------LKIE-DLVAKL 371 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 372 AH---------VTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEEKAAVARAAEIYKFDL 422 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 423 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 482 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF----F 538 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ + F + Sbjct: 483 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYALSFDSLSY 542 Query: 539 HDRLKL--YLHDRDIR------HDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +++++ ++ R + D+ +A+L N + D+++ +AK + + Sbjct: 543 DNQVEVLNFIKARVDKMMGRTPKDIKDAVLAGSN---FVVADMLEAAEALSEAAKTDGYK 599 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + EK + ++++ S L E EK L I D + S K Sbjct: 600 AAVESLSRAFNLAEKADASVAVDAS----LFENDQEKALAKAIEDL--ELTGSASDKLAQ 653 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FFD +V +D V++NRL+LL Sbjct: 654 -----LFALSPVIDAFFDNTMVMAEDEAVKNNRLALL 685 >gi|300705117|ref|YP_003746720.1| glycine tRNA synthetase subunit beta [Ralstonia solanacearum CFBP2957] gi|299072781|emb|CBJ44136.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum CFBP2957] Length = 697 Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 212/701 (30%), Positives = 349/701 (49%), Gaps = 70/701 (9%) Query: 31 GLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERL----------GPRVGAGK 79 GLL EEG + + TP RL + G+ +P++ + E++ G Sbjct: 37 GLL-EEGA---QVEGFATPRRLAAAIAGVRRTAPDRELREKVLPVNIAFDAEGKPAAPLL 92 Query: 80 KAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWP 138 K + +S G+++I+ +++ P K + ++ D L+ + I +P P Sbjct: 93 KKLAALAKSVGVESIAPETLERAPDGKAESLFYRYTARGAVLADGLQAALTQTIAGLPIP 152 Query: 139 KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 K M + + ++RP ++ +L E +++ L GN+T GHRF + Sbjct: 153 KVMTYQRPSG--DSVQFVRPAHRLIALLDDEVIPARVLGLQ-----SGNVTLGHRFLSAG 205 Query: 199 PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLV 257 I + Y L+ + V+ R+ AI A L +A +V + LL+E+ LV Sbjct: 206 EIVIPHATAYAGTLKSQGKVIAGYAERKEAI--RAELLKAAGADTVVMPEALLDEVNALV 263 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAA 317 EW ++ F++++L +P+E + LT++TNQK F +G L N F++VSN+ A+D A Sbjct: 264 EWPVIYPCHFEEQFLEVPQECLILTMQTNQKYFALTDAQGHLRNRFLIVSNL-ATDTPQA 322 Query: 318 IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 I++GN RVV RL DA F++ D+ KPL R+ L V Sbjct: 323 IIEGNERVVRPRLADARFFFEHDKK--------------------KPLADRVPLLSR--V 360 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 V+H KIGTQ ERVSR++ + ++A + ADVA RA +L+KADL T++V EFPELQG + Sbjct: 361 VYHNKIGTQLERVSRLQAIAGQLADKLGADVAHASRAALLAKADLLTDMVGEFPELQGTM 420 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA E A EH +PR + +P V+LADKL+TL+ W I P+ Sbjct: 421 GTYYARHDGEAADVALACSEHYQPRFAGDALPGTATGTVVALADKLETLVGIWGIGLAPT 480 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLIL-FFHDRL 542 G KDP+ALRR LGI+R+++E + + +++ +E D I F +DRL Sbjct: 481 GEKDPFALRRHALGILRMLIEKPLALGIAEVLEVAAASFEGIAAVKPDPAAITDFLYDRL 540 Query: 543 KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 + YL D+ + +EA++ L IV ++ + F + + E + KRI IL Sbjct: 541 RSYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAALPQAEALAAANKRITNIL-- 598 Query: 603 EEKKNREISL-EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 K +I++ + PQ L +AE+ L+ ++ H+ ++ + L + E + Sbjct: 599 ---KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFARGDFTTALKTLAGLREAV 655 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 656 DSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696 >gi|319424423|gb|ADV52497.1| glycyl-tRNA synthetase, beta subunit [Shewanella putrefaciens 200] Length = 689 Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 211/703 (30%), Positives = 335/703 (47%), Gaps = 69/703 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 293 DAGKLLPNFIFVANIESKDP-AQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 334 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----- 529 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 530 ----------EDQNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPEN-DNLLTIVDLIKH 576 ++ F R + + D+ I D+I A+L RP + + ++ + H Sbjct: 510 LHGTHLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 577 LNEFFSSAKGEKFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 F S + L +A KR+ ILA K + I L AE+ L A +++ Sbjct: 570 ----FRSLEASGALAAANKRVSNILA---KVEGALPTTIDASLLTEAAEQALAAKLNELQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + + Y Q LL + E ++ FF+ V+V DD ++ Sbjct: 623 PQLAPLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALK 665 >gi|254507339|ref|ZP_05119475.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus 16] gi|219549799|gb|EED26788.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus 16] Length = 688 Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 205/699 (29%), Positives = 331/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGADLAHEGVKWYAAPRRLALKVSALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 QADKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVEQADRLVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQATSEIVVELAAKALGNLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++S + Y LEE V+ D E R+ IL D+ + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILADSQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGTADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 NNKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ IDADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIDADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPSTGIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 449 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAKSQS 507 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + D+ D+I+A+L +K ++ Sbjct: 508 LFGDKLTNANVADDVIEFMLGRFNAWYKDQGFSVDIIQAVLANRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLAGLREPVDAFFDNVMVMADDEALK 663 >gi|254515956|ref|ZP_05128016.1| glycyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR5-3] gi|219675678|gb|EED32044.1| glycyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR5-3] Length = 694 Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 202/721 (28%), Positives = 346/721 (47%), Gaps = 59/721 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 LLEI EE+P+ + L ++ L E+G+ + + P RL + + L Sbjct: 6 LLLEIGCEELPSSSLEQLGIALHANVVAKLAEKGLSHGASHWFAAPRRLAVLVDDLVDQG 65 Query: 64 PEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ +E LGP V K +A +GF G+ + D ++ PK + + Sbjct: 66 ADETKEALGPPVAQAKDADGNWTRAAEGFAAKQGV-SADDLELVDTPKGQRLGFKQVVSG 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E L +V AI +P K MRW ++RP+ I+ + E ++ Sbjct: 125 AQTRE-CLGELVNEAIADLPIAKRMRWGAARR-----EFVRPVHWIVLMYGDEHGFGNVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GNI+ GHRFHAP PI+++S Y + A V+ D + R + I A Sbjct: 179 G-----ISSGNISKGHRFHAPDPIEIKSAKEYPSLMRNAWVIADFQERSHLIREQVDAAA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +A+G + + D DLL E+ LVEW GSFD +L +P E + +++++QK F Sbjct: 234 AALGGQALIDTDLLGEVASLVEWPVALAGSFDTAFLEVPAEALISSMQSHQKYFPVVDAS 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L F+ VSNI++ D G ++ GN RV+ RL DA F+++D+ + Sbjct: 294 GTLMPNFVTVSNIESRDPGQ-VIGGNERVIRPRLADAAFFFEQDRQH------------- 339 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L R++RL VVF ++G+ ++ R++ L ++A L AD +RA Sbjct: 340 -------SLASRVSRLGA--VVFQKQLGSLLDKTQRVQRLAGELAALTGADKTQAERAAE 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L KADL +++V EF ++QG G YA E+ + DAI +H P +P +++ Sbjct: 391 LCKADLVSDMVLEFADMQGIAGAYYARNDGEDSAVADAIAQHYWPTQAGSELPRGDVAVA 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQF 528 V+LAD+LDTL+ + I + P+GSKDP+ALRRA++ ++RI++E ++ + L + F Sbjct: 451 VALADRLDTLLGIFGIGQPPTGSKDPFALRRASIAVLRIMIEKQLTLDLRDCLAIAKAGF 510 Query: 529 IED-------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 E + + + DRL +I ++ A+ + ++ + F Sbjct: 511 AEGVISDEAPEAVFNYMLDRLPALYESDNIPIEVFRAVRGSGSSRPSDFDRRVRAVQAFG 570 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + E + KR+ ILA E +R+ LE+S L E L I+ + + Sbjct: 571 QRPEAEALAAANKRVSNILAKAE--DRDQGLEVSAHLLKEPQETALSEAIAAAASDNVNA 628 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + Y L ++ EP++ FFD V+VN +D ++ NRL+LL ++ + + ++ ++ Sbjct: 629 LANADYASALSRLATLREPVDAFFDGVMVNAEDPALKANRLALLAQLREQFMHIADISQL 688 Query: 702 V 702 Sbjct: 689 A 689 >gi|50119046|ref|YP_048213.1| glycyl-tRNA synthetase subunit beta [Pectobacterium atrosepticum SCRI1043] gi|81827262|sp|Q6DB17|SYGB_ERWCT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|49609572|emb|CAG73005.1| glycine-tRNA synthetase, beta subunit [Pectobacterium atrosepticum SCRI1043] Length = 689 Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 205/718 (28%), Positives = 331/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + ++ + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGDVSWFAAPRRLALKVARLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERLTTD--KGEWLLYRAHAK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L E++I Sbjct: 124 GEQAQALLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTLLL-----GEELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I GHRF + + + Y + L E V+ D + R+ I DA Sbjct: 174 PGQVLGIHSARTIRGHRFMGEAEFTIDNAEQYPQILLERGKVVADYDARKAKIKADAEDA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 SGNLLPHFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWVASQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSSAVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E+ Sbjct: 451 ALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + + D I+A+L +K ++ F Sbjct: 511 YGTKLTNTKAVDEVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ ILA K +++ ++ L AE L + + Sbjct: 571 RSLDAAAALAAANKRVSNILA---KSTDKLNESVNAAVLKDAAEITLATHLVVLRDKLTP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V ++ Sbjct: 628 LFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQVADI 685 >gi|19746599|ref|NP_607735.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS8232] gi|25009327|sp|Q8NZW7|SYGB_STRP8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|19748816|gb|AAL98234.1| putative glycyl-tRNA synthetase (beta subunit) [Streptococcus pyogenes MGAS8232] Length = 679 Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 204/706 (28%), Positives = 348/706 (49%), Gaps = 94/706 (13%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIED 122 G KA GF+R GL T + I+ KG+ Y+ V + KP + + Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAK---E 128 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD + Sbjct: 129 VLLGVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLD 177 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G ++ GHRF + S D Y DL V+ D + R+ I+ L G++ Sbjct: 178 IHSGRVSRGHRFLGTE-TTITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQ 236 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L Sbjct: 237 VDIDEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPN 296 Query: 303 FILV--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNL 359 F+ V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 297 FVSVRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL------------ 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIV 416 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA Sbjct: 342 ---------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQ 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 + K DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ Sbjct: 391 IYKFDLLTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAV 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 ++LADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 451 LALADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLS 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 N I D++ +DIR ++E+ + + +++ Sbjct: 511 FDSLTYANKADVMNFIRARVDKMMGKAAPKDIREAVLES-------STFVVPEMLAAAEA 563 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ E + + + + + + EK + S+++ P E E L+A I Sbjct: 564 LVKASHTENYKPAVESLSRAFNLAEKAD--ASVQVDPSLFENEQENTLFAAIQGL----- 616 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ Q+ + + ++ I FFD +V +D+ +++NRL++L Sbjct: 617 -TLAGSAAQQL-EQVFALSPVINDFFDNTMVMAEDQALKNNRLAIL 660 >gi|28378607|ref|NP_785499.1| glycine--tRNA ligase, beta chain [Lactobacillus plantarum WCFS1] gi|38258517|sp|Q88VS3|SYGB_LACPL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28271443|emb|CAD64348.1| glycine--tRNA ligase, beta chain [Lactobacillus plantarum WCFS1] Length = 694 Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 204/730 (27%), Positives = 354/730 (48%), Gaps = 73/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLEI EE+PA + + L +I LK+ + +++++ + TP RL + + GL+ Sbjct: 5 YLLEIGLEEMPAHVVTPSVLQLKERMIKFLKDARLDFEDVKTFSTPRRLTVQVLGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +E GP G KA GF + G T D + KD K Sbjct: 65 ADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGAST--DDIVFKDVKGTPYVFVQTFTA 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +VL + I K+ +P M+WST +F +IRP++ I+ +L ++++ Sbjct: 123 GKTAAEVLTGGIKDVITKMNFPTMMKWST-----YSFKYIRPIRWIVSLL-----DDEVV 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + ++ G ++ GHRF H +++ + Y DL V+ D R+ I LA Sbjct: 173 PVQILDVAAGRVSRGHRFLG-HDVEIATAADYEADLASVQVVADAAKRKATIREQIAALA 231 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + ++ ++DLLEE+ LVE+ F G FD KYL +P+E++ +++ +Q+ F E Sbjct: 232 NERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFYVTDAE 291 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L F+ V N +D + GN +V+ ARLEDA F+ DQ + S++E Sbjct: 292 DNLLPHFVSVRNGN-TDHLENVALGNQKVLTARLEDAAFFYHEDQQH-----SIQEYV-- 343 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDR 413 +R+ + V FH KIGT E++ R+ ++ +A L + + + R Sbjct: 344 ----------ERLKK-----VSFHDKIGTMYEKMQRVMIISDFLADRFGLTETEKNQLHR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G +YAVL+ E+ + AI EH P ++P +K+ Sbjct: 389 AAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDLPKSKV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 +++ADK+D++ +F+A+ PSGS DP+ALRR GI+RI+ E D P+ Q D Sbjct: 449 GAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQLEADIQ 508 Query: 532 ---------QNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 NL F DR+K + ++R IR+D+++ +++ ++ + Sbjct: 509 KELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIREMFKA 568 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 LN + + + + R+ +I A + K L + P EAE+ LY + + Sbjct: 569 ADVLNAHQDDPQFKDTIEAFTRLLRITA--KAKLAADDLTVDPSLFENEAEQHLYDAVLE 626 Query: 634 FGTHIQESMD-HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 +M R+ + L I + +F+Q +V D +VRDN L L I +I Sbjct: 627 LQKQFTPAMSMEDRFKALAALRPLIVD----YFEQTMVMSKDEKVRDNHLKQLLTIAQMI 682 Query: 693 LIVINVQKIV 702 ++ ++ +++ Sbjct: 683 NVMGDLNQLI 692 >gi|148980110|ref|ZP_01815890.1| glycyl-tRNA synthetase subunit beta [Vibrionales bacterium SWAT-3] gi|145961411|gb|EDK26717.1| glycyl-tRNA synthetase subunit beta [Vibrionales bacterium SWAT-3] Length = 688 Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 203/699 (29%), Positives = 332/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGANLAHEGVKWYAAPRRLALKVAALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 QEDKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVEQADRLVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K++ ++ A+ + Sbjct: 122 KGQATSEIVVDLAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGAD-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASGRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AGAAVGGITELEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ LD +F ++GT ++ RI L IA+ IDADV RA Sbjct: 333 --FNTDRKRPLIDRLPELDQ--AIFQKQLGTIKDKTDRITELAGYIAEQIDADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPSTGIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 449 SAVAMADKLDTIVGIFGIGQATKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAKAKE 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++I F R + + D D+I+A+L +K ++ Sbjct: 508 LLGDKLTNDNVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLANRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ +I L +AEK L ++ ++ Sbjct: 568 FRELEAAEALAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAENVAVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L ++ EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLAALREPVDAFFDNVMVMADDEALK 663 >gi|227431616|ref|ZP_03913652.1| glycine--tRNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352608|gb|EEJ42798.1| glycine--tRNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 685 Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 214/733 (29%), Positives = 356/733 (48%), Gaps = 81/733 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + + Y TP RL + L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTSSENQLIERTRNFLAEHRLTVGAINPYSTPRRLAVELTDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G T D + + D Y+ + Sbjct: 61 EESESLSEEKRGPSIERAKDANGEWTKAATGFARGQG-ATPDDFETR------DGYVWLT 113 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + +D+L I + ++ + M+W+ +AF ++RP++ ++ + Sbjct: 114 KHTEGVPAKDILVKIGAEVVSEMKFSTYMKWAN-----NAFLYVRPIRWLVALF-----D 163 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D + ++ G +T GHRF + +++ S D Y+ LE A V+++ E R+NAI + Sbjct: 164 KEVVDFHVLDVQTGRVTRGHRFLSNEHVEISSADDYVSTLESASVVVNAEVRKNAIRSQL 223 Query: 233 HRLASAVGLELVEDKD----LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +A L D D LLEE+ +VE F G+FDKKYL +P+E++ +++ +Q+ Sbjct: 224 TAIAKQNNWSLELDTDAAQNLLEEVNNIVELPTAFAGTFDKKYLEIPDEVLITSMREHQR 283 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L F+ V N + ++ GN +V+ ARLEDA F+K DQ Sbjct: 284 FFFVTNHDGKLLPHFLSVRNGN-QEHLDNVIAGNEKVLVARLEDAEFFYKEDQ------- 335 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD- 407 +K + M ++ L VFH KIGT E + R VL + +AQ ++ D Sbjct: 336 -------------TKTIADYMEKVKKL--VFHEKIGTVYEHMQRTGVLAQALAQSLNFDE 380 Query: 408 --VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 ++ V RA + K DL T +V EF ELQG +G+ YA L EN + AI+EH P Sbjct: 381 QQLSNVSRAAEIYKFDLMTGMVGEFDELQGIMGEHYAKLFGENPAVAAAIKEHYMPTSAT 440 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP- 524 + + I +++ADKLD ++ F+A + PSGS DPY LRRA GI+R + E I Sbjct: 441 GKIAESDIGAVLAVADKLDAIVTFFAADLTPSGSNDPYGLRRAATGIVRTLQEKNWHIAL 500 Query: 525 ---LSQFIEDQN---------LILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIV 571 L+QF + Q ++ F DR++ D +R DL+ A + R N +++ ++ Sbjct: 501 KPVLTQFAQSQGEVAAADITAVLEFILDRVRKLTLDDGVRQDLVSAGVSRSGNTDVVYLI 560 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D I L + S R+ + LA+++ N + P +AEK LY Sbjct: 561 DRINVLAAHSKDNDFRDVIESLTRVDR-LAVKQLTND----SVDPSLFENDAEKELYQAT 615 Query: 632 SDFG-TH-IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +H ++E D ++ L + PI +F+ +VN ++ V++NR + L I Sbjct: 616 YALNLSHLVKEGAD-----EVYTTLAGLQSPISTYFEATMVNTENAAVKNNRYAQLNVIH 670 Query: 690 NIILIVINVQKIV 702 +I + ++++IV Sbjct: 671 RLISELGDLEQIV 683 >gi|152998563|ref|YP_001364244.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS185] gi|166227925|sp|A6WH92|SYGB_SHEB8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|151363181|gb|ABS06181.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS185] Length = 689 Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 209/699 (29%), Positives = 332/699 (47%), Gaps = 61/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGQASFELAHADHYLADLKEKGKVIADYEVRKTLIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGKADIEDSLLEEVASLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 293 EAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 334 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L +Q Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAQA 509 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINANLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q LL + E ++ FF+ V+V DD ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALK 665 >gi|300725252|ref|YP_003714581.1| glycine tRNA synthetase subunit beta [Xenorhabdus nematophila ATCC 19061] gi|297631798|emb|CBJ92519.1| glycine tRNA synthetase, beta subunit [Xenorhabdus nematophila ATCC 19061] Length = 694 Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 216/731 (29%), Positives = 345/731 (47%), Gaps = 87/731 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFEAELNNANLGHGEVSWFAAPRRLALKVANLAAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERMVTD--KGEWLLYRAQVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +D+L +V ++ K+P PK MRW + ++RP+ ++ +L ++ Sbjct: 124 GREAKDLLAEMVSSSLGKLPIPKLMRWGDKET-----QFVRPVHTVTMLL-----GRDVV 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 D ++ I I GHRF +++ + Y L+E V+ D E R+ I DA R Sbjct: 174 DGEILGIKSDRIIRGHRFMGEAEFTIENAEQYPAILQERGRVIADYEARKAIIKRDAERA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AAQLGGVADLSDNLLEEVASLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++SD I+ GN +VV RL DA F Sbjct: 294 SGKLMANFIFVTNIESSDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 334 -FNTDRKQRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALAGWIAEQIGADVEHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +V EF + QG +G YA E A+ E +PR +++P+ +S Sbjct: 391 LLSKCDLMANMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYQPRFSGDDLPSTGVSC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLQTLAEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPEN----DNLLTIVDLI 574 +++ F R + + + D I+A+L RP D + V Sbjct: 511 YGDKLTNEKAVDDVVEFMLGRFRAWYQELGYSVDTIQAVLARRPTQPADFDARMKAVTHF 570 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+E S A KR+ ILA E+K L S Q +L+A + + Sbjct: 571 RTLDEAVSLAAAN------KRVSNILAKSEEK-----LNDSVQASVLKAAEEI-----QL 614 Query: 635 GTH---IQESMD----HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 TH ++E + Y L S+ E ++ FFD V+V +D +VR NRL+LL Sbjct: 615 ATHLVVLKEKLTPLFAESNYQDALVELVSLREVVDAFFDNVMVMDEDSQVRINRLTLLSE 674 Query: 688 IKNIILIVINV 698 ++++ L V ++ Sbjct: 675 LRDLFLRVADI 685 >gi|227498772|ref|ZP_03928914.1| metal-dependent phosphohydrolase [Acidaminococcus sp. D21] gi|226904226|gb|EEH90144.1| metal-dependent phosphohydrolase [Acidaminococcus sp. D21] Length = 686 Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 208/729 (28%), Positives = 346/729 (47%), Gaps = 72/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EE+PA+ ++ + LKE + ++ + Y TP R+ +G++ Sbjct: 1 MATLLYEIGTEEMPAQYMPGILKNYKELAETKLKEARIPFEKVSVYGTPRRMAFVAEGIA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP + G KA+ GF R G++ + +K D Y+ + Sbjct: 61 DRQEDMTAESKGPSLKIAFDADGNPTKAVQGFARGQGVEVSA-------LEKRDGYVYAI 113 Query: 114 RKPKRLIEDVL-KTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K VL ++ + + +PK+MRW+ F ++RP ++ +L +E Sbjct: 114 KHTKGGETKVLLPALLDDILHSLSFPKTMRWADYD-----FGFVRPFHWMVALLDSE--- 165 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I ++ ++ GN+T GHRF I + S + Y++ LEE +++D E RR I Sbjct: 166 --VIPVEANDVKSGNVTRGHRFLGSQTITIPSAEAYVKTLEENFIIVDVEKRRALIREQI 223 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L G +DLL+E+ LVE+ GS D KYL LP+E + ++ +Q+ F Sbjct: 224 EALGKKAGGHTAISEDLLDEVTYLVEYPTALCGSIDDKYLKLPKEAVITPMRDHQRYFPV 283 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI V N S+ + GN RV+ ARL+DA+ F++ D+ +L + +E Sbjct: 284 LDDSGKLLPYFITVRNGN-SEHLDIVTHGNERVLRARLDDAVFFFENDRKK--SLEAHRE 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL 410 + + DV F +G E+ R+ L + + + AD Sbjct: 341 A--------------------LHDVAFQRGMGNMYEKTERLEALTSCLLKESGVAADEKA 380 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA LSKADL T +V EF ELQG +G+EYA+L E + AI E PR + +P Sbjct: 381 LVRAARLSKADLVTGMVTEFTELQGTMGREYALLDGEGDTVSTAIGEQYMPRFAGDELPQ 440 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +++ADKLD + ++ E P+GS+DPYALRR LGI+ I+ + I L+ I+ Sbjct: 441 TNEGRLLAIADKLDNITATFSRGEAPTGSQDPYALRRQALGILNIVTDGNIHFALTSAIK 500 Query: 531 DQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDL 573 + +++ FF R K + DR +R+D+++A+L E D+L Sbjct: 501 ETLSRLPKTNQSEDKLVADIVEFFAQRSKNMMLDRGVRYDIVDAVLGAEGRDDLCDAFAA 560 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L + + K + L + R+ I KK+R + +S L +AEK L+ + Sbjct: 561 ADALTAYLGTDKAPETLQAFTRVENIT----KKSR-VDAPVSEALLREDAEKALFEAVEK 615 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + + + + S+ PI FFD V+V D V+ NRL+LL I+++I Sbjct: 616 AAENVHGMLLSRDFAGVLTACDSLSAPINHFFDDVMVMDKDEAVKQNRLALLTKIRSLIG 675 Query: 694 IVINVQKIV 702 V +V +V Sbjct: 676 CVGDVSLLV 684 >gi|260891272|ref|ZP_05902535.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia hofstadii F0254] gi|260858948|gb|EEX73448.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia hofstadii F0254] Length = 678 Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 219/732 (29%), Positives = 367/732 (50%), Gaps = 91/732 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI EE+PAR +A +DL I+ LK E + + + + TP R+ +K L+ Sbjct: 2 NFLFEIGLEELPARYVDQAEKDLKKIIENELKAERIKFSGIESFSTPRRVTAIIKDLAEK 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + ++ +GP V G KA +GF++S G TI D +I ++ K + + Sbjct: 62 QDDLDKKSVGPSVEIAYKEGQLTKAGEGFVKSQG-ATIDDIKIVENEKGKYISIEKFIAG 120 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K E +L I+ AI+K+ + KSM+W+ F ++RP+K + + D E I+ Sbjct: 121 KNTRE-ILPEILKNAIKKIEFEKSMKWAD-----RTFRFVRPIKWFVTLF---DNGE-IL 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + GN T G R+ A I++ + Y + + E V++D E RR IL Sbjct: 171 PFEFEGLKGGNKTRGMRYFASQDIEINNPLDYEKIMLENFVIVDGEKRREEILKSIRENG 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G + +K LL+E++ +VE+ G F K YL LPE++I +T++T+Q+ F + ++ Sbjct: 231 EKDGDTAIINKYLLDEVVNVVEYPYAIKGEFSKDYLKLPEDIITITLETHQRYFPVKDKD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN--LPNLSSLKESA 354 G L+N FI++ N A + + +GN +VV RL DA F+ D N N+ LKE Sbjct: 291 GKLSNKFIVIRN--APEYSETVKKGNEKVVEPRLADAKFFFDEDLKNKFADNVEKLKE-- 346 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD-- 412 V F +GT E+V R +KIA+ + +++ L D Sbjct: 347 ----------------------VTFQKDMGTIFEKVKR----SEKIAEYLISELNLNDKK 380 Query: 413 ----RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 R + L+KADL + ++ +EF +LQG +G YA Q E+ I EH PR + Sbjct: 381 KNIIRTVDLAKADLVSNVIGEKEFTKLQGFMGSVYAEKQGEDKDVALGIFEHYLPRYQGD 440 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +PT +ADK+DT+I +A+ KP+ SKDPYALRRAT GII++ L +K+ Sbjct: 441 ELPTTVEGAIAGIADKMDTIIGCFAVGLKPTSSKDPYALRRATQGIIQVTLNSKLSFDYK 500 Query: 527 QFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + IE +++ FF R+ L ++ + DLI + E++ Sbjct: 501 KLIEKAYEIFSADKKVLEKDVVKDVTEFFKQRIINVLSEK-YQKDLINYEINLESN---- 555 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSA---KRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 +V+L K L+E ++ E F + KR+ I+ E+ +N L I LE EK Sbjct: 556 VVELDKKLSELLKLSQTENFEILINLLKRVKNIVKDEKNEN----LNIDSTLFELEEEKT 611 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+ + + ES+++ + + L + I FFD V++NVD++++++NR++LL+ Sbjct: 612 LHNLANQL-----ESIENTDFSNYIETLLNNASTINQFFDNVIINVDNKKLKENRIALLK 666 Query: 687 YIKNIILIVINV 698 ++ I +IN+ Sbjct: 667 KLEISIDKMINI 678 >gi|56476157|ref|YP_157746.1| glycyl-tRNA synthetase beta chain [Aromatoleum aromaticum EbN1] gi|81821186|sp|Q5P766|SYGB_AZOSE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56312200|emb|CAI06845.1| glycyl-tRNA synthetase beta chain [Aromatoleum aromaticum EbN1] Length = 696 Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 213/727 (29%), Positives = 362/727 (49%), Gaps = 70/727 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + + E + + LK ++ ++ R + P RL + + + Sbjct: 8 LVELLTEELPPKALPRLGETFAAKVFEGLKARDLVAEDRGFRCFAAPRRLAVTVPTVRAA 67 Query: 63 SPEK-IEERLGP------RVGAGKKAIDGFLRSTGL--QTISDCQIKKDPKKGDVYLAVL 113 +P + + E++ P G A+ L++ G+ + ++ + + D K ++ L Sbjct: 68 APSREVTEKIMPVQVALDAEGRPTPALLKKLQAKGIAPEAVASFERRVDGKAEALFYTHL 127 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +P ++DVL IV A++ +P PK MRW + ++RP+ + + A Sbjct: 128 -EPGAALDDVLAAIVQEAVKALPIPKLMRWGAGDA-----QFVRPVHKLAMLHGARVVPG 181 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 +++DLD G +T GHRF + I++ + + Y L E V+ D RR+ I Sbjct: 182 RVLDLD-----AGRVTMGHRFMSRGEIELATAEAYEPTLLAEGKVIPDFAERRSNIERQL 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A G L E DLL+E+ LVE V++G F+ ++L +P+E + LT++ NQK F Sbjct: 237 VATAQEQGASLGEYADLLDEVAALVEHPTVYVGEFELEFLAVPQECLILTMRANQKYFPL 296 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L N F++VSN++ +D + IV GN RVV RL DA F+++D+ + Sbjct: 297 FDAAGKLLNRFLIVSNMRLADP-SNIVAGNQRVVRPRLSDARFFFEQDRKHT-------- 347 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 LD R+ RL VV+H K+G+Q ERV R+ L +IA + DVA Sbjct: 348 ------------LDSRLPRL--APVVYHNKLGSQLERVERLERLAGRIADRLHGDVAAAS 393 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+KADL T++V EFPELQG +G+ YA+ E DA++ H +PR + +P Sbjct: 394 RAARLAKADLVTDMVGEFPELQGIMGRYYALNDGEGEVVADAVQSHYQPRFAGDTLPAGN 453 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 + V+LADKLDTL+ F+ I + P+G KDP+ LRRA LG++RI++E + + L+ + D Sbjct: 454 TACAVALADKLDTLVGFFGIGQLPTGDKDPFGLRRAALGVLRILIETPLPLDLAALVGDA 513 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 L+ F +RL+ L + D+++A+L + + + Sbjct: 514 AEGFAPGLLTAADFESQLLDFMFERLRNLLREAGHAVDVVDAVLALHPTRIDLVPAKLDA 573 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL--EAEKRLYAVISDF 634 + F + E + KRI IL E + E P LL +AEK L+ + + Sbjct: 574 VRVFRGLPEAEALAAANKRIVNILKKAEDELPE------PDVALLQEQAEKALFHAVVEV 627 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++ Y L + ++ FFD V+V V++ R NRL+LL+ + ++ Sbjct: 628 APLVHSHVANEDYTDALCALAGLRAAVDTFFDDVMVMVEEPLTRRNRLALLRQLAGLMNQ 687 Query: 695 VINVQKI 701 V ++ ++ Sbjct: 688 VADLSRL 694 >gi|288555749|ref|YP_003427684.1| glycyl-tRNA synthetase subunit beta [Bacillus pseudofirmus OF4] gi|288546909|gb|ADC50792.1| glycyl-tRNA synthetase subunit beta [Bacillus pseudofirmus OF4] Length = 693 Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 215/731 (29%), Positives = 352/731 (48%), Gaps = 75/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ EE+PAR + L + LKEE + + + + TP RL +Y+ GL Sbjct: 5 DFLFELGLEELPARFVTDSMNQLKNKVSDWLKEERLDFDAIEAFSTPRRLAIYITGLKEK 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ E GP G KA GF R G+ T D K+ VY Sbjct: 65 QPDVEAEAKGPAKKIAQDEEGNWSKAALGFARGQGV-TADDLFFKELKGVEYVYAKTFTA 123 Query: 116 PKRLIE--DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K+ +E LK+IV + +PK+MRW+ + RP++ ++ + E Sbjct: 124 GKKTVELLPALKSIV----TSMHFPKNMRWNQYD-----LRFARPIQWMVALY-----GE 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +II ++ ++ N T GHRF +K+ + Y L V+ PE R+ AI N Sbjct: 170 EIIPFEITDVKTSNATRGHRFLGEE-VKLDTPADYETALLGQYVIARPEERKRAIRNQIE 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + G + D+DLLEE+ LVE+ G++D +L +P+E++ +++ +Q+ F Sbjct: 229 SMTEGNGWVIPIDEDLLEEVTNLVEYPTALSGTYDDAFLEIPKEVLITSMREHQRYFPVE 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L F+ V N + +GN +V+ ARL DA F+ DQ Sbjct: 289 DTEGKLLPHFVTVRNGDHQHL-ENVAKGNEKVLRARLSDAAFFYAEDQK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 LK ++ + RL+ ++V+H +G+ ++V R+R I++L+ D + Sbjct: 337 -LK--------IEDALGRLE--NIVYHEDLGSIADKVRRVRKGVTSISKLVALDSNEQEV 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DR ++K DL T++V EFPELQG++G+ YA L E + I+EH P+ + P+ Sbjct: 386 ADRIAEIAKFDLVTQMVYEFPELQGRMGEVYAGLIGEPVEVTVGIKEHYMPKFAGDKSPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 K S VSLADKLDT++ +AI P+GS+DPYALRR GI+++I + D+ + + + Sbjct: 446 TKASTVVSLADKLDTIVTCFAIGLIPTGSQDPYALRRQAAGIVQMIADYDFDVEIDELVA 505 Query: 530 ----------------ED--QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED + ++ FF R+K L ++ IR+D+I+A+L E ++ T + Sbjct: 506 ASLDVSEERGLLKRDREDITKEVMEFFSLRIKNALQEKGIRYDVIDAVLTSEAIHVSTTI 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L + S +K + + R+ I K E ++EI P+ E EK LY Sbjct: 566 KKAELLMDQVSQPAFKKTVEALSRVTNI-----AKKAETAVEIKPELFEKEEEKELYRHY 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +Q ++ + + L SI I +FD ++V +D +V+ NRL+ + + + Sbjct: 621 ESAQKEVQIALANGDASRAFKSLQSIEPSIHAYFDHIMVMAEDEKVKRNRLAQMLELSAV 680 Query: 692 ILIVINVQKIV 702 I N Q IV Sbjct: 681 IRAFANFQSIV 691 >gi|58337480|ref|YP_194065.1| glycyl-tRNA synthetase subunit beta [Lactobacillus acidophilus NCFM] gi|227904116|ref|ZP_04021921.1| glycyl-tRNA synthetase beta chain [Lactobacillus acidophilus ATCC 4796] gi|81311456|sp|Q5FJU0|SYGB_LACAC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|58254797|gb|AAV43034.1| glycyl-tRNA synthetase beta chain [Lactobacillus acidophilus NCFM] gi|227868135|gb|EEJ75556.1| glycyl-tRNA synthetase beta chain [Lactobacillus acidophilus ATCC 4796] Length = 687 Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 219/736 (29%), Positives = 352/736 (47%), Gaps = 90/736 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ L+ LKE G+ +++++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVPRSVSQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + E K Sbjct: 121 KEGKKASDILLGMSEI-IKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGNEVIPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 175 ILD-----ITAGRKTEGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQMDE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVKENHWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRN-GNKDYLDNVISGNEKVLVARLDDAQFFYDEDR------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + RL DV FH KIG+ E+V R+R++G +A+ L + V Sbjct: 335 -------KYPLSHFVDRLK--DVSFHDKIGSMAEKVQRVRMIGDYLAKRWNLPENVVKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P GPL Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + DQ + F DR+K YL ++D+I+A+L + Sbjct: 503 LPEIISLLNGVTPARLPKSDVDQEIADFIRDRVKQYLQKNKFKYDIIDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL +K + ++E+ +EK LY Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRIDNIL---KKAKFKGNVEVDESLFEDNSEKELYV 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + ++QE + DL + I+ +FD ++ + +V++NRL+ L Sbjct: 620 GVQ----NLQE------IESLADLYQGFVQLQPVIDQYFDVNMIMDKNEKVKNNRLAQLY 669 Query: 687 YIKNIILIVINVQKIV 702 + + + N+ K+V Sbjct: 670 AVSELADRLGNLSKLV 685 >gi|320354068|ref|YP_004195407.1| glycyl-tRNA synthetase beta chain [Desulfobulbus propionicus DSM 2032] gi|320122570|gb|ADW18116.1| glycyl-tRNA synthetase beta chain [Desulfobulbus propionicus DSM 2032] Length = 694 Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 214/737 (29%), Positives = 353/737 (47%), Gaps = 85/737 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L EI +EEIPA A + L+ L+ + ++ +R + TP RL L + L Sbjct: 1 MSELLFEIGTEEIPAGYIQPALDALAAGTAKKLRSLDLAFEGIRTFGTPRRLTLTIDRLQ 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTG-----LQTISDCQIKKDPKKGDV 108 ++ +E +GP AG KA GF RS G LQ ++ KG+ Sbjct: 61 SRQADRRQEHIGPSKKAGFDAEGKLTKAAIGFARSKGCEPEALQVVTTA-------KGEY 113 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + V + +L ++ ++++ +PKSMRW+ + ++ RP++ I+ + Sbjct: 114 LMVVEDVQGQATSALLPVLLESLVRELVFPKSMRWADYN-----MAFARPIQWIVALYDG 168 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + + L+++ + CG T GHRF AP +V +D Y+ L E VL+DP RR + Sbjct: 169 QG-----VPLEIEGVGCGRTTRGHRFMAPAEFEVGGIDEYLTKLAEHFVLVDPVQRRAKV 223 Query: 229 LNDAHRL----ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 + + R A + + + LL+ + LVE+ G F++K+L LPEE + +++ Sbjct: 224 IEEIQRAVREGAGNPDAQPILHEGLLDTVTNLVEYPYGVCGHFERKFLQLPEETLVTSMR 283 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 +QK F +EG L F+ V+N + D A G+ RV+ ARLED L F Sbjct: 284 EHQKYFPVTDKEGKLLPLFVAVNNTRIEDVALA-ASGHERVLRARLEDGLFF-------- 334 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGT---QGERVSRIRV-LGKKI 400 F+ D +PL R A L +VF K+GT + ER++R+ V L KI Sbjct: 335 ------------FHEDRKRPLADRCAELS--GIVFQNKLGTMAAKSERITRLAVALAGKI 380 Query: 401 AQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 A ++ D RA L+KADL T +V EFP LQG +G+ YA+ E AIEEH Sbjct: 381 APELEHDAI---RAARLAKADLLTAMVGEFPTLQGIMGRVYALHDGEKAEVAQAIEEHYL 437 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P + + V +AD++DTL+ +AI EKP+G+KD + LRR +G+I +I Sbjct: 438 PLRAGGELPQSLLGALVGIADRMDTLVGCFAIGEKPTGNKDAFGLRRQAIGLINVIKGCN 497 Query: 521 IDIPLSQF----------IEDQN------LILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + + L + + QN ++ F R + + +L+EA Sbjct: 498 LSLSLGEVAAAALQGYEGVVAQNPEVLDEVLSFIRLRFENEQIAAGLPQELVEAATSVGC 557 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 DN + + I L++ + S KRI I+ KKN+ + I+ L AE Sbjct: 558 DNPVDCLRRIAALDQIRTQESFRVLAGSFKRIRNIV----KKNKATA--INTDLLTEPAE 611 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + L+A ++ ++ + Y + + EP++ FFD+V+V +D VR NRL+L Sbjct: 612 QELFAALNRVREKAWPMIEQREYQPALLEMLEMKEPVDRFFDKVMVMAEDEAVRQNRLNL 671 Query: 685 LQYIKNIILIVINVQKI 701 L + ++L V ++ ++ Sbjct: 672 LTALGELVLRVGDISRM 688 >gi|78357076|ref|YP_388525.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552273|sp|Q30ZR6|SYGB_DESDG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|78219481|gb|ABB38830.1| glycyl-tRNA synthetase beta chain [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 696 Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 216/722 (29%), Positives = 337/722 (46%), Gaps = 75/722 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F++EI +EE+PAR ++++ L V + + TP RL L ++ + Sbjct: 1 MSVFVMEIGTEELPARFLSGLEQEIASRFEAALAAANVEFGTLNVQSTPRRLALTIENID 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 E E GP V G KA +GF R+ G + + D KG+ YLAV Sbjct: 61 AVQREAEEVVSGPPVRIAFDAQGRPTKAAEGFARTQGAELDELFTLTTD--KGE-YLAVR 117 Query: 114 RKPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K R ++++L + P I +P+PK M+W + F++ RPL+ +L + +E Sbjct: 118 KKTGGRPVQEILSEVAPEIIAALPFPKKMKWGSGD-----FTFGRPLRWVLALFDSE--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY---IRDLEEAMVLLDPECRRNAIL 229 ++ + I GN T GHR H P P +V D Y +RD + V L RR + Sbjct: 170 --VVSFTVAGIVSGNETCGHRVHGPGPFEVSGADAYAGTVRD--KCHVTLCAADRRRVTV 225 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA+ G ++ LL+E+ GL E +G FD +L LP E++ +++++QK Sbjct: 226 EGGDALAAQAGGRILWKDSLLDEVQGLCEHPVPCLGDFDPSFLELPAEVLLTSMESHQKS 285 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L F+ V N+ + A + +G RV+ ARLEDA FWK Sbjct: 286 FGVAAADGSLMPHFLTVLNMTPQNS-ALVKKGWERVLRARLEDARFFWK----------- 333 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 DL+ D +A+LD +V+F A +G+ G++ R+ L + +A + D+ Sbjct: 334 ---------ADLASDFDSWLAKLD--NVIFLAPLGSMGDKTRRLERLCRWLAAAVAPDIQ 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA LSKADL +E+V EF LQG +G YA + E+ A+ E P GP V Sbjct: 383 EQAARAGRLSKADLVSEMVYEFDSLQGIMGGIYARRKGEDEIVAQAVSEQYLPAGPESPV 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK DTL + ++ P+G+ DPYALRR LGI RI+LE + + + Sbjct: 443 PDSLCGALLSIADKADTLAGCFGLSMIPTGAADPYALRRCALGIARIMLEKGLRFDVREL 502 Query: 529 IE------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + L FF RLK + L+EA L D++ Sbjct: 503 FRYAQEGYGERQWKLKPEQAAEKLHEFFVLRLKNLFVSQGHETLLVEAALHAGADDVWAA 562 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY----LLLEAEKR 626 ++ L+ F SA+ + +L+ KR I+ K+ +E + Y EAEK Sbjct: 563 GARLEALDRFSKSAEFGQAVLTFKRAANII---RKQGQEEDGGLDGCYDASLFEDEAEKA 619 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L + D + YH + LL + ++ FFD V+V +D +R NRL+LLQ Sbjct: 620 LAGALEDIAPDFEARWAADDYHALFGLLGVLRPAVDAFFDSVMVMCEDPHIRRNRLNLLQ 679 Query: 687 YI 688 + Sbjct: 680 SL 681 >gi|120552981|ref|YP_957332.1| glycyl-tRNA synthetase subunit beta [Marinobacter aquaeolei VT8] gi|166227917|sp|A1TWM6|SYGB_MARAV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120322830|gb|ABM17145.1| glycyl-tRNA synthetase beta chain [Marinobacter aquaeolei VT8] Length = 693 Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 198/698 (28%), Positives = 343/698 (49%), Gaps = 60/698 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + ++ + ++ L+E GV + + + P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALKPLSDAFTQGIVKGLEEAGVAFGAVESFAAPRRLAVRIRDLADA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K E+ GP V G +A+ GF S G+ ++ D VY V K Sbjct: 65 QPDKSVEKRGPAVKAAFDDSGNPTRALTGFATSLGITPDQLDTMETDKGAWLVYRTV-EK 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K +E ++ +V ++ +P PK MRW + ++RP+ ++ + K+ Sbjct: 124 GKPTVE-LMPDLVEKSLAALPIPKRMRWGAWKT-----EFVRPVHWLILLY-----GNKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQS-LDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + + GN T GHRFH P + V + D+ + +E VL D RR I Sbjct: 173 IEAPVMNLKPGNKTRGHRFHCPKELIVPTPADYEVVLKQEGYVLADFAERREQIRAGVAA 232 Query: 235 LASA-VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G + V D+DLL+E+ L EW MG F+ ++L +P E + ++K +QK F Sbjct: 233 LAEKEAGGKAVIDEDLLDEVTALNEWPVPLMGRFEDRFLEVPAEALISSMKEHQKYFHVV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + FI V+N+++ D + ++ GN +V+ RL DA F++ D +++ Sbjct: 293 DASDNMLPLFITVANLESKDP-SQVISGNEKVIRPRLSDAAFFYETD----------RKT 341 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L+ ++ KP +VF K+G+ ++ R+ L KKIA+ I++D AL +R Sbjct: 342 RLEDRIESLKP------------IVFQDKLGSIYDKSVRVAALAKKIAEAINSDPALAER 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL TE+V EF +LQG +G+ YA E+ A+ E PR +++PT Sbjct: 390 AAMLAKTDLVTEMVLEFTDLQGIMGQYYAANDGEHEDVAKALNEQYMPRFAGDDLPTTLT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--D 531 V++AD++D+L+ + IN+ PSG++DP+ALRRA+LG++RII+E ++ + L E + Sbjct: 450 GCAVAIADRIDSLVGLFGINQPPSGTRDPFALRRASLGVLRIIIERQLPLDLQTVCEWAE 509 Query: 532 QNLIL------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 QN + + DR + + ++ I ++ A+ L +K + Sbjct: 510 QNFTVLTENNTASTVVDYMLDRFRAHYDEQGICAEVYLAVHARRPTRPLDFDRRVKAVEA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ IL ++ I + L AEK L A + + + Sbjct: 570 FRQLPEAQALAGANKRVSNILT--KQGGDSIGETVDTALLQDAAEKTLAAKVEEQAQQVL 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + Y L S+ EP++ FFD+V+V DD V Sbjct: 628 PMFEQGDYASALTSLASLREPVDTFFDEVMVMADDDAV 665 >gi|68249510|ref|YP_248622.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 86-028NP] gi|81336063|sp|Q4QLY5|SYGB_HAEI8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|68057709|gb|AAX87962.1| Glycyl-tRNA synthetase beta chain [Haemophilus influenzae 86-028NP] Length = 722 Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 214/755 (28%), Positives = 347/755 (45%), Gaps = 100/755 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRTKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 KGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L ++ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F+K Sbjct: 293 KDGRLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFFFK---------------- 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 DL + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 336 ----TDLKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ I Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLNDIISKAFD 509 Query: 532 --------------------------QNLILFFH--------------------DRLKLY 545 + + FF R + + Sbjct: 510 LYKELDNERLRNAPIAKTRGGFSEYPEGYVSFFTRGDDLVPKQKILDEVVDFMLGRFRAW 569 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 D I D+I+A+L ++ ++ F + E + KR+ ILA Sbjct: 570 YQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKAGA 629 Query: 606 KNREISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 EI+L + P AEK L + T +Q + Y + D L ++ P++ Sbjct: 630 AIGEINLTACVEP------AEKALAEAVLALRTEVQPLIAQGDYTAVLDKLANLRAPVDS 683 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 684 FFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADI 718 >gi|167835498|ref|ZP_02462381.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis MSMB43] Length = 699 Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 207/683 (30%), Positives = 335/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGLQ----TIS 95 +Y TP RL + ++ + +PEK + E++ P A GK + + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPEKQVREKVLPVSVALDAEGKPSAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKAEAFFVNYAAPGATLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I G+ T GHRF + + +Q Y L E+ Sbjct: 169 VRPVHRLTVLR-----DDRIVPVTAFGIDAGDTTLGHRFLSDGLVAIQHASAYADTLREK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 VL R+ AI A+A G ++V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVLAHFAGRKEAIRTQLE--ANANGDQVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI + + I++GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNI-GTKTPSEIIEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL +R+ L +VV+H K+G+Q RV R+ Sbjct: 341 FFFEQDKK--------------------KPLAERVPLL--ANVVYHNKLGSQLARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD + RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 TLAGEIAPAIGADATVAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDVAIA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +P +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CSEHYRPRFSGDALPATPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + I FF DRL+ L +R ++A+ Sbjct: 499 LLLEKQLPLDLVWLLRTAYERFAAVPGVAESTDAIYAFFVDRLRGLLRERGYTAGEVDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L L IV + + EF A+ E + KRI IL +K + + P Sbjct: 559 LSLNPTRLDDIVARLDAVREFTRLAEAEALAAANKRISNIL---KKSESSANGAVQPALF 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L ++D +Q ++ + Y L ++ P++ FFD V+VN +D +R Sbjct: 616 VEAAEKALAEQLADVTPRVQSQLEARAYTGALSALAALRAPVDAFFDGVMVNAEDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|260664402|ref|ZP_05865254.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii SJ-7A-US] gi|260561467|gb|EEX27439.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii SJ-7A-US] Length = 688 Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 216/731 (29%), Positives = 356/731 (48%), Gaps = 79/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF+R G+ T I + KG Y V ++ Sbjct: 64 QADIDEVKKGPAKKIALDSEGNFTKAAQGFVRGQGMTT---DDIYFEDLKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K +L D+L + + I+ + +P MRW + F ++RP+ ++ + +E K Sbjct: 121 KAGKLATDILLGMSDI-IKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSEVVPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF I S D Y L+ V+ D R+ I+N + Sbjct: 175 ILD-----ITAGRKTMGHRFLGDSVILANS-DDYEEALKSQFVIADAAERKTMIVNQIDQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 229 LVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 QDGKLINHFISVRN-GNKEFLENVISGNEKVLVARLDDAKFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ L D + Sbjct: 335 -------KYPLSHFVSRLD--KVSFHDKIGSMAEKLIRVRIIGEYLAKKFGLSDEVIKNF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT+ Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-EN---KIDIPLSQ 527 ++ +S+ADK D +I F+A P+ S D YALRR GI+RI+L EN ID L + Sbjct: 446 EVGALLSVADKFDNIITFFAAGMIPTSSNDLYALRRYAYGIVRILLNENWSLAIDKALPK 505 Query: 528 FI----------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + ED+ + LF DR+K +L + ++D+I+A+L + I+ Sbjct: 506 MVELLDGKTKAKMPKTSQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQKDPSRIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S + + + S RI IL + K + + +E LY Sbjct: 566 AAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELY--- 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +++D+ ++ + S+ + I+ +F+ ++ D V++NRL+ L I + Sbjct: 620 --LASQNLQAIDN--LTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINEL 675 Query: 692 ILIVINVQKIV 702 + + K+V Sbjct: 676 ATRLGALSKLV 686 >gi|270293041|ref|ZP_06199252.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M143] gi|270279020|gb|EFA24866.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M143] Length = 678 Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 209/699 (29%), Positives = 351/699 (50%), Gaps = 81/699 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMATFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQPVESIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLG-QETKIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEQGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + DL + L Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLVIS-------------DLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 + V FH KIG+ E R +I +L +K +D V L RA + K D Sbjct: 346 NH---------VTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAILAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYDLKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + ++K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLASLN---FVVADMLEAASALVEASKQEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF---GTHIQESMDHKR 646 S + + + + EK E + + P E EK L + GT Q+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGTDTVDPALFENEEEKALAEAVESLVLSGTAGQQL----- 625 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + L ++ I+ FF+ +V +D++VR NRL++L Sbjct: 626 -----EQLFALSPIIDAFFENTMVMAEDQDVRQNRLAIL 659 >gi|289168228|ref|YP_003446497.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis B6] gi|288907795|emb|CBJ22635.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis B6] Length = 678 Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 210/703 (29%), Positives = 355/703 (50%), Gaps = 83/703 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKE-TKIQSALSYEEDLRSQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 +V FH KIG+ E R +I +L + A L + + RA + K DL Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF----F 538 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F + Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALTFDSLTY 516 Query: 539 HDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 ++ ++ ++ R D+ EA+L N + ++++ + ++K E F Sbjct: 517 ENKTEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVAEMLEAASALVEASKEEDFK 573 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDF---GTHIQESMDHK 645 S + + + + EK +++ S L E EK L V+ GT Q+ ++H Sbjct: 574 PSVESLSRAFNLAEKAEGVATVDSS----LFENDQEKALAEVVESLVLSGTANQQ-LNH- 627 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L ++ I+ FF+ +V +D VR NRL++L ++ Sbjct: 628 --------LFALSPVIDAFFENTMVMAEDEAVRQNRLAILSHL 662 >gi|160873138|ref|YP_001552454.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS195] gi|189082273|sp|A9KU83|SYGB_SHEB9 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160858660|gb|ABX47194.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS195] gi|315265363|gb|ADT92216.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS678] Length = 689 Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 209/699 (29%), Positives = 331/699 (47%), Gaps = 61/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAIKVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLAVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 293 DAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 334 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L +Q Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANAAEEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q LL + E ++ FF+ V+V DD ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALK 665 >gi|217971228|ref|YP_002355979.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS223] gi|254781861|sp|B8E3Q5|SYGB_SHEB2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|217496363|gb|ACK44556.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS223] Length = 689 Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 209/699 (29%), Positives = 331/699 (47%), Gaps = 61/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELSKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLAVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 293 DAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 334 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L +Q Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAQA 509 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q LL + E ++ FF+ V+V DD ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALK 665 >gi|121998011|ref|YP_001002798.1| glycine--tRNA ligase [Halorhodospira halophila SL1] gi|121589416|gb|ABM61996.1| glycyl-tRNA synthetase beta chain [Halorhodospira halophila SL1] Length = 696 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 211/727 (29%), Positives = 338/727 (46%), Gaps = 68/727 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+P + + L L+E+ + ++ + TP RL + +G+ Sbjct: 7 LLIEIGTEELPPKALQRLMIAFRNDLASALEEQRLQPVGVQAFATPRRLAVRFEGVDTRQ 66 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ ERLGP+V G KA +GF RS G+ + ++ D V+ V +P Sbjct: 67 ADEQIERLGPKVEAAYDAAGQATKAAEGFARSCGVDVDALDSVETDKGPRLVWRGV--QP 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 E +L +V A+ ++P PK MRW + ++RP+ + +L E++I Sbjct: 125 GEATETILPGLVEAALGRLPIPKRMRWGSGE-----VEFVRPVHWTVALL-----GEQVI 174 Query: 177 DLDLKEIPCGNITYGHRFHAP--HPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 + IP G ITYGHRFH I++ Y R LEE V+ D RR + Sbjct: 175 PGTILGIPTGRITYGHRFHGRGRRGIEIPEPGAYERLLEEQGHVVADFVERRRRVETGVR 234 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A G V ++ L +E+ GLVEW G FD+++L +PEE + +++ +Q+CF R Sbjct: 235 QEAERAGGVPVGEEALFDEVTGLVEWPVALSGDFDQRFLKIPEEALISSMQGHQRCFPVR 294 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI V+NI++ D + GN RV+ RL DA FW++D+ Sbjct: 295 GTDGQLLARFITVANIESQDP-QQVRHGNERVIRPRLADAEFFWQQDRR----------- 342 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L L + L+Q + VVFH +G R RI L + + I ADV R Sbjct: 343 -----LALGERLEQ------LRQVVFHRSLGDLHARSQRISRLAGLVTERIGADVEAARR 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL TE+V EFPELQG +G YA E + AI H +P + +P Sbjct: 392 AGLLAKCDLVTEMVDEFPELQGIMGGHYARADGEGDAVAAAIAAHYRPAYAGDALPETPE 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 VS+AD++DTL+ +A + PS KDP+ LRRA +G++R ++E D+ L +F++ Sbjct: 452 GQAVSIADRIDTLVGIFAADGAPSADKDPFGLRRAAIGLLRCLIEGGHDLSLREFLDTAA 511 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + + F H+RL+ Y +R ++ EA+ + L + Sbjct: 512 GMIADECGVSTEGIAEQVAAFCHERLRGYYAERGYAAEVFEAVAAVAPSSPLDFHRRLVA 571 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEE--KKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F ++ + + KRI IL E + R ++E + + L S Sbjct: 572 CSTFRERSEAQTLGEANKRIGNILRRAEVDPQTRPEAVEADGEAAERALAEALREAWSVA 631 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 G I D Y L + P++ FF V+V +D VR RL LL +++ Sbjct: 632 GPRI----DRGEYDAALTALAELHGPVDRFFTDVMVMAEDEAVRQRRLELLGAVRHAFRA 687 Query: 695 VINVQKI 701 V ++ + Sbjct: 688 VADLSHL 694 >gi|284801845|ref|YP_003413710.1| hypothetical protein LM5578_1600 [Listeria monocytogenes 08-5578] gi|284994987|ref|YP_003416755.1| hypothetical protein LM5923_1552 [Listeria monocytogenes 08-5923] gi|284057407|gb|ADB68348.1| hypothetical protein LM5578_1600 [Listeria monocytogenes 08-5578] gi|284060454|gb|ADB71393.1| hypothetical protein LM5923_1552 [Listeria monocytogenes 08-5923] Length = 688 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 209/722 (28%), Positives = 348/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAQYVSSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEAMAEE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q + + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDEEGNWSKAALGFAKS---QKVDPADLTFRDIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSALLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVATSNTSRGHRFLGKSATIKQPSD-YPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++E L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEDELLPHFVTVRNGNHENLNT-VARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEVI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE A+ E F + + + +++ I K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNE---HAEAEWFRPTIEALSRVVKI--AKKYEDGVEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIERLKAFADLRTT----IDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|47095409|ref|ZP_00233019.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|254898376|ref|ZP_05258300.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes J0161] gi|254912132|ref|ZP_05262144.1| glycyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936460|ref|ZP_05268157.1| glycyl-tRNA synthetase [Listeria monocytogenes F6900] gi|47016230|gb|EAL07153.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|258609052|gb|EEW21660.1| glycyl-tRNA synthetase [Listeria monocytogenes F6900] gi|293590103|gb|EFF98437.1| glycyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 688 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 209/722 (28%), Positives = 348/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEAMAEE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q + + KG Y+ + Sbjct: 64 QANRVEESKGPAKKIALDEEGNWSKAALGFAKS---QKVDPADLTFRDIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSALLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVATSNTSRGHRFLGKSATIKQPSD-YPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++E L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEDELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEVI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE A+ E F + + + +++ I K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNE---HAEAEWFRPTIEALSRVVKI--AKKYEDGVEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIERLKAFADLRTT----IDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|251783139|ref|YP_002997442.1| glycyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391769|dbj|BAH82228.1| glycyl-tRNA synthetase beta chain [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 679 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 207/700 (29%), Positives = 349/700 (49%), Gaps = 82/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + ++N++ + TP RL + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFENIQTFSTPRRLAARVIGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + + ++VL Sbjct: 75 AKKIALDTDGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + + +P SM W+ ++F +IRP+ ++ +L E +I Sbjct: 132 GVAEV-LTAMTFPVSMHWAK-----NSFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGKE-TTITSADSYEDDLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L FI Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFIS 299 Query: 306 V--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNLDLS 362 V N QA D +++GN +V+ ARLED FW+ DQ + +L Sbjct: 300 VRNGNDQAIDN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL--------------- 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 +A+L +V FH KIG+ E + R RV+ +A+ L + A VDRA + K Sbjct: 342 ------VAKL--ANVTFHEKIGSLTEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++L Sbjct: 394 FDLLTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAEGALPETKVGAVLAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 454 ADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDS 513 Query: 532 ------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +++ F R+ + + + D+ EA+L + + +++ +++ Sbjct: 514 LTYANKADVMSFIRARVD-KMMGKAVPKDIREAVLES---STFVVPEMLAAAEALVNASH 569 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + + + + + + EK + S+ + P + E+ L+A I S++ Sbjct: 570 KENYKPAVESLSRAFNLAEKAD--ASVRVDPSLFENDHEQALFAAIQSL------SLEGS 621 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +Q+ + + ++ I FFD +V DD+ +++NRL+LL Sbjct: 622 AENQV-EQVFALSPEINDFFDNTMVMADDQAIKNNRLALL 660 >gi|158521723|ref|YP_001529593.1| glycyl-tRNA synthetase, beta subunit [Desulfococcus oleovorans Hxd3] gi|158510549|gb|ABW67516.1| glycyl-tRNA synthetase, beta subunit [Desulfococcus oleovorans Hxd3] Length = 702 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 206/724 (28%), Positives = 343/724 (47%), Gaps = 79/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI +EE+PA A L+ L+ L E V R + TP RL + ++ ++ Sbjct: 6 LLFEIGTEELPAGYIEPALAALANTLVRKLTEARVACGTARTFGTPRRLAVIIEDVAGKQ 65 Query: 64 PEKIEERLGPRVGAGKK-------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E GP G A F G+ + ++ + KG+ YLA + Sbjct: 66 ETVTTELTGPPRSVGMDENGRFTLAAKKFAEKAGVALKAVKVVRTE--KGE-YLAARKVE 122 Query: 117 KR-LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K L +LKT++P I +P+PK+M+W+ + ++ RP+ S+ +L + + Sbjct: 123 KGVLTSRILKTVLPQVITSLPFPKTMKWADRNE-----TFARPVHSLTVLL-----GKSV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L I GH F P P+ + D Y+ + VL+D R+ A+ + + Sbjct: 173 VRLSWAGISSNRNCMGHSFMHPAPVSISHPDAYVEQMRRHFVLVDTAERKAAVRREIGQA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+G EL+ D++L++ + LVE+ G FD+K+L LP+E++ +++++QK F + Sbjct: 233 AIALGGELLPDEELVDVVTNLVEYPVASAGRFDEKFLALPKEVLITSMRSHQKYFAVTDK 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L CF+ V+N + SD + G+ RV+ ARLEDA+ F+++D Sbjct: 293 KKNLMPCFVAVNNTKVSDIDV-VTTGHQRVLRARLEDAMFFYQKD--------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID----ADVALV 411 L PLDQR+ D+ VVF A++GT E+ RI LG +A D A V Sbjct: 337 -----LQAPLDQRVP--DLARVVFQARLGTLLEKTQRIEQLGLMLAGQADPGNTATGQTV 389 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L KADL T V EFP+LQG +G+ +A E + AIEEH +P ++P + Sbjct: 390 VRAATLCKADLVTHTVIEFPKLQGVMGRVFARASGEPEAVARAIEEHYQPLYAGADLPES 449 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +++ADK+D++ +A+ PSG+ DPYALRR +G+I+I+L + I LS+ I+ Sbjct: 450 LAGALLAVADKIDSICGCFAVGLVPSGASDPYALRRQGIGLIQILLSHNIGASLSRIIQA 509 Query: 532 Q-----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL------L 568 + LF R+ L D + D+ A+L D++ Sbjct: 510 AMAPFASVSTEPVQAAADGVSLFLRGRMAQMLVDDGVPRDVATAVLNASADHVPDAWKRS 569 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + +K L +F E + KR+ I I++ +EI+ E++ AE L Sbjct: 570 RALAAVKPLPDF------EPIAAAFKRVANI--IKKADPKEIAGEVNSDLFEAPAESTLL 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + +++ + Y + + + ++ FFD+VLV D R NRL+LL + Sbjct: 622 DACQAVKIKMDDALARQDYSRALTEIADLRSVVDTFFDEVLVMAKDSGRRRNRLALLSRV 681 Query: 689 KNII 692 ++ Sbjct: 682 NSLF 685 >gi|256828796|ref|YP_003157524.1| glycyl-tRNA synthetase subunit beta [Desulfomicrobium baculatum DSM 4028] gi|256577972|gb|ACU89108.1| glycyl-tRNA synthetase, beta subunit [Desulfomicrobium baculatum DSM 4028] Length = 693 Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 220/731 (30%), Positives = 348/731 (47%), Gaps = 70/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI EE+PAR +L+ LL E G+ Y + TP RL + + GLS Sbjct: 1 MRHFVLEIGVEEMPARFLPLLDRELADRFSALLSEAGLAYGRVATASTPRRLVVDITGLS 60 Query: 61 PHSPEKIEERL--GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + +K EE + GP G KA GF +S Q + QI + YLA Sbjct: 61 --AVQKTEEIVVSGPPARIAFDADGNPTKAGLGFAKS---QNVEFDQIYVEKTDKGEYLA 115 Query: 112 VLRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + + R ++L + + +PK M+W RP++ IL +L Sbjct: 116 LKKTVGGRTAGEILAETCMAILPNLTFPKKMQWMGKECTFG-----RPVRWILAML---- 166 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAIL 229 ++I+ + N T GHR P P V D Y R L ++ V+L R+ AI Sbjct: 167 -DDQIVPFAFAGLTASNQTRGHRVMGPGPFTVPHADEYARILNDQGKVILHAADRKQAIR 225 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + RLA+ +G + + LL+++ LVE + +G F +K+L LP E++ +++T+QK Sbjct: 226 AEGDRLAAEMGGSVEWLESLLDQVANLVETPRAMLGGFHEKFLELPAEVLLTSMETHQKS 285 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F R +G L F+ +NI++ + A + +G RV+ ARLEDA FW+ Sbjct: 286 FGLRGADGKLLPYFLTAANIESREP-ALVRKGWERVLRARLEDARFFWE----------- 333 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 D + D + +LD V+F +GT G++ R+ L IA + ++ Sbjct: 334 ---------ADCAATFDHWLDKLD--KVIFIGPLGTMGDKTRRLEKLAAFIASRVAPELG 382 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA LSKADL +E+V EF +LQGK+G YA Q E+ + +A+ E P G + Sbjct: 383 ESMRRAGRLSKADLVSEMVYEFDDLQGKMGGIYARRQGESQTVAEALYEQYLPAGQDSPL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-- 526 P++K +SLADKLD L + + P+G+ DPYALRR LG+ RIILE + + + Sbjct: 443 PSSKAGAILSLADKLDNLAGCFGLGMMPTGAADPYALRRNALGVCRIILEMGLQVDIEVL 502 Query: 527 -------------QFIED---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 +F ED + L+ FF RL+ Y + + I +IEA + P ++ Sbjct: 503 LREAQKGYAGVTWKFGEDEALEKLMDFFGQRLRAYWNGQGIPTLVIEAAMAPGFTDIHDT 562 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ L EF E +L+ KR I I ++ ++++S + L ++AEK +A Sbjct: 563 WLRVRALAEFSREDDFEASVLTFKRAANI--IRKQADQDLSGAVREDLLEVDAEKSFWAT 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + E Y Q+ L + ++ FFD V+V DD +R NRL+LL + N Sbjct: 621 LQGIEPVWAELAATADYAQMLSRLRVLRPAVDGFFDGVMVMCDDLALRTNRLNLLYRLVN 680 Query: 691 IILIVINVQKI 701 + V + K Sbjct: 681 TLGRVADFGKF 691 >gi|254827746|ref|ZP_05232433.1| glycyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254829783|ref|ZP_05234438.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes 10403S] gi|258600125|gb|EEW13450.1| glycyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] Length = 688 Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 209/722 (28%), Positives = 348/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAQYVSSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEAMAEE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q + + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDEEGNWSKAALGFAKS---QKVDPADLTFRDIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSALLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVATSNTSRGHRFLGKSATIKQPSD-YPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++E L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEDELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEVI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LNE A+ E F + + + +++ I K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNE---HAEAEWFRPTIEALSRVVKI--AKKYEDGVEVDPALFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDYAGLTIIERLKAFADLRTT----IDAYFDNTLVMSDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|306826894|ref|ZP_07460194.1| glycyl-tRNA synthetase beta subunit [Streptococcus pyogenes ATCC 10782] gi|304430912|gb|EFM33921.1| glycyl-tRNA synthetase beta subunit [Streptococcus pyogenes ATCC 10782] Length = 679 Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 204/706 (28%), Positives = 348/706 (49%), Gaps = 94/706 (13%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ E E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTELTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIED 122 G KA GF+R GL T + I+ KG+ Y+ V + KP + + Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAK---E 128 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD Sbjct: 129 VLLGVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLN 177 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G ++ GHRF + S D Y DL V++D + R+ I+ L G++ Sbjct: 178 IHSGRVSRGHRFLGTE-TTITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQ 236 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D++LL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L Sbjct: 237 VDIDENLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPN 296 Query: 303 FILV--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNL 359 F+ V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 297 FVSVRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL------------ 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIV 416 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA Sbjct: 342 ---------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQ 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 + K DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ Sbjct: 391 IYKFDLLTGMVGEFDELQGIMGEKYALLAGEDAAVARAIREHYLPDAAGGALPETKVGAV 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 ++LADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 451 LALADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLS 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 N I D++ +DIR ++E+ + + +++ Sbjct: 511 FDSLTYANKADVMNFIRARVDKMMGKAAPKDIREAVLES-------STFVVPEMLAAAEA 563 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ E + + + + + + EK + S+++ P E E L+A I Sbjct: 564 LVKASHTENYKPAVESLSRAFNLAEKAD--ASVQVDPSLFENEQENTLFAAIQGL----- 616 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ Q+ + + ++ I FFD +V +D+ +++NRL++L Sbjct: 617 -TLAGSAAQQL-EQVFALSPVINDFFDNTMVMAEDQALKNNRLAIL 660 >gi|295693060|ref|YP_003601670.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus ST1] gi|295031166|emb|CBL50645.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus ST1] Length = 687 Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 212/736 (28%), Positives = 353/736 (47%), Gaps = 90/736 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDQDGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + ++ K Sbjct: 121 KEGKKASDILLGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSDVIPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y L++ V+ D + R++ I+ + Sbjct: 175 ILD-----ITAGRKTQGHRFLG-DSVVLANADDYEDALKDQFVIADADERKDMIVRQMNE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVKKNNWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLKIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ETGKLINHFIAVRN-GNKDYLDNVISGNEKVLVARLDDAQFFYDEDR------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 335 -------KYPLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLAKRWDLPENVVKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P GPL Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 I-------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + DQ + F DR+K YL D ++D+I+A+L + Sbjct: 503 LPEIISMLNGVTPAKLPKSDADQEIADFVRDRVKQYLQKNDFKYDIIDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL +K + + + +EK LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRIDNIL---KKAKFKSNTAVDESLFDDNSEKELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + + + + DL + I+ +F+ ++ D +V++NRL+ L Sbjct: 620 GVQNL----------QDIESLADLYQGFVQLQPVIDQYFETNMIMAKDEKVKNNRLAQLY 669 Query: 687 YIKNIILIVINVQKIV 702 + + + ++ K+V Sbjct: 670 AVNELADRLGDLSKLV 685 >gi|227878691|ref|ZP_03996605.1| glycyl-tRNA synthetase beta subunit [Lactobacillus crispatus JV-V01] gi|256843285|ref|ZP_05548773.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 125-2-CHN] gi|256850358|ref|ZP_05555786.1| glycyl-tRNA synthetase subunit beta [Lactobacillus crispatus MV-1A-US] gi|262046494|ref|ZP_06019456.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] gi|293380132|ref|ZP_06626219.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 214-1] gi|312978176|ref|ZP_07789920.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus CTV-05] gi|227861706|gb|EEJ69311.1| glycyl-tRNA synthetase beta subunit [Lactobacillus crispatus JV-V01] gi|256614705|gb|EEU19906.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 125-2-CHN] gi|256712755|gb|EEU27748.1| glycyl-tRNA synthetase subunit beta [Lactobacillus crispatus MV-1A-US] gi|260573365|gb|EEX29923.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] gi|290923302|gb|EFE00218.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 214-1] gi|310894894|gb|EFQ43964.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus CTV-05] Length = 687 Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 212/736 (28%), Positives = 353/736 (47%), Gaps = 90/736 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDQDGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + ++ K Sbjct: 121 KEGKKASDILLGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSDVIPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y L++ V+ D + R++ I+ + Sbjct: 175 ILD-----ITAGRKTQGHRFLG-DSVVLANADDYEDALKDQFVIADADERKDMIVRQMNE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVKKNNWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLKIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ETGKLINHFIAVRN-GNKDYLDNVISGNEKVLVARLDDAQFFYDEDR------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 335 -------KYPLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLAKRWDLPENVVKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P GPL Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 I-------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + DQ + F DR+K YL D ++D+I+A+L + Sbjct: 503 LPEIISMLNGVTPAKLPKSDADQEIADFIRDRVKQYLQKNDFKYDIIDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL +K + + + +EK LYA Sbjct: 563 ILAAATVLQLHHDDEEFKPVVESLTRIDNIL---KKAKFKSNTAVDESLFDDNSEKELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + + + + DL + I+ +F+ ++ D +V++NRL+ L Sbjct: 620 GVQNL----------QDIESLADLYQGFVQLQPVIDQYFETNMIMAKDEKVKNNRLAQLY 669 Query: 687 YIKNIILIVINVQKIV 702 + + + ++ K+V Sbjct: 670 AVNELADRLGDLSKLV 685 >gi|288904608|ref|YP_003429829.1| glycyl-tRNA synthetase (beta subunit) [Streptococcus gallolyticus UCN34] gi|288731333|emb|CBI12884.1| glycyl-tRNA synthetase (beta subunit) [Streptococcus gallolyticus UCN34] Length = 679 Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 206/701 (29%), Positives = 352/701 (50%), Gaps = 84/701 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGL-TTDDIEFRE--VKGEEYVYVTKHEAGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 DI-PEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H ++ S D Y DL + V+ D + R++ I+N + A +++ Sbjct: 181 GRVSRGHRFLG-HETEIASADSYEEDLRKVFVIADAKERQDMIVNQIKDIEKAQNVQVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ LK + L Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQK-------LKIADL---------- 341 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 342 ---VAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRL 542 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I+ NL D L Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELID--NLYALSFDSL 514 Query: 543 KLYLH----------------DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Y H + + D+ EA+L N + ++++ + ++K Sbjct: 515 T-YEHKAEVMDFIRARVEKMMSKSVSKDIKEAVLAGSN---FVVAEMLEAADALVEASKA 570 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDH 644 + + + + ++ + EK +++++ S L E EK L ++ ++ S Sbjct: 571 ADYKAAVESLSRVFNLAEKAPADVTVDAS----LFENNEEKALAQAAAEL--NLSGSASD 624 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 K L ++ I+ FFD +V VD+ V++NRL++L Sbjct: 625 KLAQ-----LFALSPVIDKFFDNTMVMVDNEAVKNNRLAIL 660 >gi|259910253|ref|YP_002650609.1| glycyl-tRNA synthetase subunit beta [Erwinia pyrifoliae Ep1/96] gi|224965875|emb|CAX57408.1| Glycyl-tRNA synthetase beta subunit [Erwinia pyrifoliae Ep1/96] gi|283480370|emb|CAY76286.1| glyS [Erwinia pyrifoliae DSM 12163] Length = 689 Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 204/718 (28%), Positives = 330/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L L G+ + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANLTAELDAAGLPHGEVSWFAAPRRLALKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ + R Sbjct: 66 PDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLMYRARVT 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++ ++ K+P PK MRW S ++RP+ ++ +L E I+ Sbjct: 124 GERTQVLLPAMIATSLAKLPIPKLMRWGA-----SEVQFVRPVHTVTLLLGDELVPANIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D GHRF + D Y + L E V + E R+ I DA Sbjct: 179 GID-----SARTLRGHRFMGEPAFTIDHADQYPQILLERGKVQANYEVRKAIIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 234 AAKIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D + L+ + RL+ V+F ++GT + RI+ L +A I ADV RA Sbjct: 334 -FNSDRKRRLEDNLPRLET--VLFQKELGTLRAKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + + D ++A+L +K ++ F Sbjct: 511 YGNKLSNAKAVDEVIDFMLGRFRTWYQEEGHSVDTLQAVLARRPTRPADFDARMKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K ++ + L E +L ++ + +Q Sbjct: 571 RTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALSSKLQP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + E ++ FFD+V+VN +D++VR NRL+LL ++ + L V ++ Sbjct: 628 FFAEGRYQDALIELAQLRETVDNFFDKVMVNAEDKKVRINRLTLLAKLRELFLQVADI 685 >gi|238926230|ref|ZP_04657990.1| glycine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238885910|gb|EEQ49548.1| glycine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 682 Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 217/733 (29%), Positives = 335/733 (45%), Gaps = 89/733 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA + EDL+ + +LKE + + +R TP R L + GL+ Sbjct: 4 DLLLEIGTEEIPAHVMPHLLEDLAQLAETMLKEHRLSCEKVRTLGTPRRAALIVTGLAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G KA GF R G+ + Q + G VY +V Sbjct: 64 QEDVNTETRGPSVAIAFDSDGNPTKAGAGFARGQGVDPSALIQ-----RDGYVYASVHES 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 E +L +++P ++ +P P SMRW F +IRP++ + + E I Sbjct: 119 GAATAE-LLTSLLPDLVRAIPLPNSMRWGDLD-----FRFIRPIRWFVALYGTE-----I 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + GN + GHR AP + S Y E+A +++DPE RR I Sbjct: 168 VPFALAGVTSGNHSRGHRTLAPADFVITSAADYEAACEKAYIIVDPERRRAMICEQIAET 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N GG + GN RV+ ARL DA F+ D+ SL Sbjct: 288 DGSLLPVFITVRN-----GGKEHLDIVAHGNERVLRARLADAQFFFDEDRRK-----SLA 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI------D 405 E R + VVF +G+ E+ R+ L I + + D Sbjct: 338 EH-----------------REKLKTVVFQQGLGSMYEKTERLMALTTAIVEEMAEGDAAD 380 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 A +A RA LSKADL T +V EF ELQG +G+EYA+L E+ + AI+E PR Sbjct: 381 AVLAGAQRAAKLSKADLVTGMVTEFTELQGIMGREYAMLDGEDPAVARAIDEQYMPRFAG 440 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P + +S ADK+D ++ ++ P+GS+DP+ALRR LG++ +++E K + L Sbjct: 441 DELPQTPLGFALSAADKVDNIVGTFSQGRIPTGSQDPFALRRQALGLVLMLIEQKSTMLL 500 Query: 526 SQFIED------------QNLILFFHD----RLKLYLHDRDIRHDLIEAILRPENDNLLT 569 S +++ Q + ++ D RLK L +R +R+D+ EA+L + D + Sbjct: 501 SDLVDEACDLYDLDVSLCQKMQVYVADFIRLRLKNVLTERGVRYDVQEAVLE-DVDFVAD 559 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + ++ +S + + S R+ I + P E E L + Sbjct: 560 VPVRAAYVERLLASDGADALVQSFVRVGNI------ARGVTGGAVDPALFQAEEEGALLS 613 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 E D + ++ + I FFD V+V D +++NRLSLL+ I Sbjct: 614 AYQTAAAARAEGEDTLPAER------ALGKAINAFFDAVMVMDKDVRIKENRLSLLKMID 667 Query: 690 NIILIVINVQKIV 702 + +L + KIV Sbjct: 668 DYLLETADYSKIV 680 >gi|297621503|ref|YP_003709640.1| glycyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297376804|gb|ADI38634.1| glycyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 1010 Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 203/731 (27%), Positives = 356/731 (48%), Gaps = 74/731 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI SEE+PA +L +I LL +E + Y+ + Y TP RL + ++ L Sbjct: 319 FLLEIGSEELPAAFVPIGLRNLESAIIELLNKENLSYEKLNVYGTPRRLSVVVENLQLTI 378 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPK------KGDVYL 110 E +EER GP + G K A GFL+S G + + I+ D + KG YL Sbjct: 379 SEAVEERRGPPLDRAFNEDGTLKPAGAGFLKSIGKELLDRTAIENDEEIEIREVKGSAYL 438 Query: 111 -AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A ++ P + +L +P I + +PK M+W S+ RPL+ I+ ++ E Sbjct: 439 FAKVKTPGKSAARILADSLPSIILNLEFPKKMKWGDLE-----ISYARPLQWIVAMIGTE 493 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 ++ + ++ GN + GHR P P ++ + Y+ L E +L DP R+ I+ Sbjct: 494 -----VVPFIVGDLISGNASRGHRQLDPDPFEILNPQSYLETLREHRILADPAERKQEII 548 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + L + +GL ++E ++ +++ LVEW V G+FD+ +L +P+E++ + +QK Sbjct: 549 KQLNTLENQLGLHVIERDAVIPQVLNLVEWPMVAKGNFDENFLKIPQEVLISEMVEHQKY 608 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L F++ N ++ +++GN +V++ARL D + +++D Sbjct: 609 FPVADENGKLKPQFVITCNTLPTEN---MIRGNQKVLSARLSDGVFLYEKD--------- 656 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADV 408 L P + +L V + + +G+ E+V R+ + + + + + + Sbjct: 657 -----------LGVPFESFNEKLKA--VTYLSGLGSIYEKVLRLEGHVEVLQEHLQISSL 703 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA L K DL +++V EFPELQG IG+ YA+ E AIEEH P+G + Sbjct: 704 KNVHRAARLCKCDLVSDMVFEFPELQGTIGRYYALAHGEKPEVAQAIEEHWMPKGENAPL 763 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 PT++ + LA+K+D L++ ++ KP+ SKDPYALRR L IIR+++ K +PL Sbjct: 764 PTSETGSVLCLAEKIDNLLSCFSAGLKPTSSKDPYALRRQVLSIIRLVIAKKFRLPLKNI 823 Query: 529 IE--------------DQ---NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ DQ ++ FF +R+K + D +EA + D++ Sbjct: 824 LDKCTRNFDPMHLSSKDQVIKEVMDFFTNRIKSIFQEYGFTKDEVEASIACGFDDIYDTF 883 Query: 572 DLIKHLNEF-FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ L+EF SS + K KR LA ++ LL +AEK L Sbjct: 884 CRVQALHEFRASSEEFPKLYEVYKRAKGQLA------NHSAVAFDKGLLLKDAEKELDKT 937 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +E++ H+ Y Q L+ + + F++V + +D ++++NR++LLQ + + Sbjct: 938 LDSTKEKFEEALSHQHYAQAYQLIAQMQPSLARLFNEVRILDEDEKIKENRIALLQRVFS 997 Query: 691 IILIVINVQKI 701 + +++ KI Sbjct: 998 LFEQLLDFSKI 1008 >gi|161936376|ref|YP_140919.2| glycyl-tRNA synthetase subunit beta [Streptococcus thermophilus CNRZ1066] Length = 678 Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 206/700 (29%), Positives = 349/700 (49%), Gaps = 77/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL TI D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGL-TIDDIEFRE--VKGEEYVYVTKHEAGKSAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 132 GI-PEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ LK + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQK------------LK--------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + D+++ +AK + Sbjct: 517 DNQAEVIRFIKARVDKMMG--STPKDIKEAVLSGSN---FVVADMLEAAEALSEAAKTDG 571 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + + EK + ++++ S L E ++ + + S K Sbjct: 572 YKAAVESLSRAFNLAEKADTSVAVDAS----LFENDQEKALAQAAESLELTGSASDKLAQ 627 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L + I+ FFD +V DD V++NRL+LL + Sbjct: 628 -----LFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSAL 662 >gi|282850265|ref|ZP_06259644.1| glycyl-tRNA synthetase, beta subunit [Veillonella parvula ATCC 17745] gi|282579758|gb|EFB85162.1| glycyl-tRNA synthetase, beta subunit [Veillonella parvula ATCC 17745] Length = 683 Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 217/733 (29%), Positives = 349/733 (47%), Gaps = 88/733 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL+ Sbjct: 4 DLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGLADT 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQT----ISDCQIKKDPKKGDVYLA 111 S E E GP G KA GF R GL + D I + K V Sbjct: 64 SAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVADLVVEDGYIYAETKTAGV--- 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + D++ ++P I + +PKSM W + ++RP++ + +L Sbjct: 121 ----PAK---DIVTDMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWFVALL----- 163 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 164 DEEVIPVEFATVKSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQ 223 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 224 LHDMAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFP 283 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +EG L F+ V N SD +VQ GN RV+ ARL+DA F Sbjct: 284 LVDQEGKLLPMFLTVRN--GSDYSIEVVQAGNERVLRARLDDAKFF-------------- 327 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDA 406 FN D KPL R L +VF +G ++ R+ RV G++ DA Sbjct: 328 ------FNEDRKKPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDA 379 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V L +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + Sbjct: 380 AVVL-ERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESEEVAEAIFEQYLPRFAGD 438 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 439 VLPQTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLR 498 Query: 527 QFI-----------EDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 E Q+ +L FF RLK DR++ H +I+ +L ++N L++ Sbjct: 499 PIFKASMELLNVPAEKQDELLDQVEEFFTLRLKNIFLDREVPHHVIDLLL---SNNELSV 555 Query: 571 VDLIKHLNEFFSSAKGEKFLL--SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 D +N ++ E L + R++ ++ K+ E + ++ L +AEK L+ Sbjct: 556 ADAEGLVNALLANRIDENVELVQAYTRMYNLV-----KDVEYT-GVNSDLLKEDAEKALF 609 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + + Y + + ++ I FF+ V+V D ++ NRL L++ Sbjct: 610 EAATKASEASSAAWEAGDYDAVVAVPATLVPAINKFFEDVMVMDKDEAIKANRLQLVRLA 669 Query: 689 KNIILIVINVQKI 701 +++ I+ ++ + Sbjct: 670 YSVMAIIGDISAL 682 >gi|332686711|ref|YP_004456485.1| glycyl-tRNA synthetase beta chain [Melissococcus plutonius ATCC 35311] gi|332370720|dbj|BAK21676.1| glycyl-tRNA synthetase beta chain [Melissococcus plutonius ATCC 35311] Length = 693 Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 212/720 (29%), Positives = 347/720 (48%), Gaps = 86/720 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EEIPA + + L ++ L E+ + Y+ ++ + TP RL +Y+ + Sbjct: 4 DLLLEIGLEEIPANLVTPSRLQLEERIVQFLNEQRLTYETIQTFSTPRRLAVYVSEIPDE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF G++T D I ++ G Y + + Sbjct: 64 QEDIYEEVKGPAKKIALDNEGNWTKAAQGFAIGQGVET--DAIIFRELM-GIEYAYITKY 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + T + I + +P +M WS +IRP+ I + E++ Sbjct: 121 IKGQAAVNVLTGLKEIILSMTFPVTMCWSNYD-----LDYIRPIHWITALF-----GEQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + NI+ GHR I Q+ D Y L E V+ DP+ R+ I + Sbjct: 171 IPFSILNVQTNNISQGHRSLGDQIIIRQASD-YQTKLSEQFVIADPKERKRIIQQQMEEI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + L+ D+ LLEE+ LVE+ F+G+F +KYL +P+E++ ++K +Q+ F Sbjct: 230 SQKNNWHLIYDEALLEEVTNLVEYPTAFVGNFSEKYLAIPKEILITSMKDHQRYFEVYNH 289 Query: 296 EGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V N G ++QGN +V+ ARLEDA F+ D+ Sbjct: 290 EGDLLPHFISVRN-----GDQVHLKNVIQGNEKVLVARLEDAEFFYNEDKK--------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDAD 407 L ++ +++ + V FH KIGT E++ R+ +++GKK+ L + Sbjct: 336 -------LSITTCVNK------LKQVTFHDKIGTIYEKMQRVCLISQIIGKKVG-LTKTE 381 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + + RA + K DL T +V EFPELQG +G++YA+L E + AI EH P Sbjct: 382 LLDLKRASEIYKFDLVTNVVNEFPELQGIMGEKYALLHGEKPNVAQAIREHYLPISSEGE 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +PT+ I +++ADKLD++ +F+A + PSGS DPYALRR T GIIRI+ ENK + P+ Q Sbjct: 442 LPTSIIGSVLAVADKLDSVFSFFAKDMIPSGSNDPYALRRQTYGIIRIVAENKWEFPIIQ 501 Query: 528 F-----------------IEDQNL--ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + D N+ + F R++ L RHD+I+A++ E +LL Sbjct: 502 LQKEIYAAINAKESFGIKLNDDNMQVVDFIKGRIRQLLSSEHFRHDIIDAVISSEQQDLL 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN---REISLEISPQYLLLEAEK 625 ++ K L + + + F S + + +++ + EK +E L + + +E+ Sbjct: 562 KLLTTAKTLRKHLAD---DDFKASIEALTRVINLAEKGKELMKEPILTVELELFENNSEE 618 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +LY + + E + Y D L ++ IE +FDQ +V +D+ +++NRL L Sbjct: 619 KLYEAVQKISANFDEQTIDENY----DALMNLRILIENYFDQTMVMTEDKAIKNNRLKQL 674 >gi|260771056|ref|ZP_05879984.1| glycyl-tRNA synthetase beta chain [Vibrio furnissii CIP 102972] gi|260613945|gb|EEX39136.1| glycyl-tRNA synthetase beta chain [Vibrio furnissii CIP 102972] Length = 688 Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 208/699 (29%), Positives = 328/699 (46%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L G+ + + Y TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFTAELNNAGIAHDGVTWYATPRRLALKVANLAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L + Sbjct: 64 QPDKVVEKRGPAVSVAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K+ L IL + + Sbjct: 122 KGQDTAAVVVDMAAKALAHLPIAKPMRWGDKET-----QFIRPVKT-LTILFGD----TL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ID ++ + G I GHRF + S Y L E V+ D E R+ I++ A + Sbjct: 172 IDGEILGVKSGRIIRGHRFMGEPEFTIDSAAQYPAILLERGKVIADYETRKAMIIDGAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DL+EE+ LVE+ V F++K+L +P E + T+K +QK F Sbjct: 232 AAAELGGIADLEDDLVEEVTSLVEFPVVLTAKFEEKFLKVPAEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ANKHLLPNFIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL L R+ +L+ +F K+GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDLKSKLVDRLPQLET--AIFQQKLGTIKDKTDRITELAGYIAEQIGADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR +++PTN +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDSLPTNGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 449 AAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +Q++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDRLSNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARHPTKPADFDRRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRDLDAAEALAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEAVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQQALSQLAGLREPVDAFFDNVMVMADDEALK 663 >gi|227326603|ref|ZP_03830627.1| glycyl-tRNA synthetase subunit beta [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 689 Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 203/718 (28%), Positives = 330/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + ++ + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGDVSWFAAPRRLALKVARLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 PDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERLTTD--KGEWLLYRAHAK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L E++I Sbjct: 124 GEQAQALLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL-----GEELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I GHRF + + + Y + L E V+ D + R+ I DA Sbjct: 174 PGQVLGIDSARTIRGHRFMGEAEFTIDNAEQYPQILLERGKVVADYDARKAKIKADAEEA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 SGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++G+ ++ RI+ L +A I A+V RA Sbjct: 334 -FNTDRKKRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWVAGQIGANVDHAKRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P++ ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPSSAVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E+ Sbjct: 451 ALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++I F R + + + D I+A+L +K ++ F Sbjct: 511 YGDKLSNAKVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ IL K ++ ++ L AE L + + Sbjct: 571 RSLDAAAALAAANKRVSNILT---KSTDTLNESVNAAVLKDAAEITLATHLVVLRDKLTP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V ++ Sbjct: 628 LFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQVADI 685 >gi|116627393|ref|YP_820012.1| glycyl-tRNA synthetase subunit beta [Streptococcus thermophilus LMD-9] gi|122268006|sp|Q03LV6|SYGB_STRTD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116100670|gb|ABJ65816.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus thermophilus LMD-9] gi|312277908|gb|ADQ62565.1| Glycyl-tRNA synthetase beta subunit [Streptococcus thermophilus ND03] Length = 678 Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 205/700 (29%), Positives = 352/700 (50%), Gaps = 77/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKSAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 132 GI-PEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ LK + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQK------------LK--------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + D+++ +AK + Sbjct: 517 DNQAEVIRFIKARVDKMMG--STPKDIKEAVLSGSN---FVVADMLEAAEALSEAAKTDG 571 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + + EK + ++++ S L +++ A +++ + S K Sbjct: 572 YKAAVESLSRAFNLAEKADTSVAVDAS---LFENDQEKALAQVAE-SLELTGSASDKLAQ 627 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L + I+ FFD +V DD V++NRL+LL + Sbjct: 628 -----LFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSAL 662 >gi|284049109|ref|YP_003399448.1| glycyl-tRNA synthetase, beta subunit [Acidaminococcus fermentans DSM 20731] gi|283953330|gb|ADB48133.1| glycyl-tRNA synthetase, beta subunit [Acidaminococcus fermentans DSM 20731] Length = 686 Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 208/732 (28%), Positives = 340/732 (46%), Gaps = 78/732 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L EI +EE+PA+ ++ + L E + + ++ Y TP R+ +G++ Sbjct: 1 MANLLYEIGTEEMPAQYMPGILKEYRELAGKKLAEARIPFSTVKVYGTPRRMAFLAEGVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP + G +A GF R G+ Q K G VY Sbjct: 61 EKQEDSNVESKGPSLKIAFDKDGNATRAAQGFARGQGVDVKDLVQ-----KDGYVYAVKH 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + K+ I D+L I+ + + +PK+MRW+ F ++RP + ++ +L + Sbjct: 116 LEGKKTI-DLLPAILDDILHSLNFPKTMRWADYD-----FGFVRPFRWMVALL-----DD 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I ++ ++ G GHRF + H I + Y + +E+ V++D + RR I Sbjct: 165 QMIPVEANDVKSGREARGHRFLSNHLITIPDAAAYEKTMEDNFVMVDVDKRRETIRKQIE 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA A G + DLLEE+ LVE+ G D KYL LP+ I ++ +Q+ F Sbjct: 225 DLAVAEGGKAAISPDLLEEVTFLVEYPTALCGHIDDKYLRLPDCAIITPMRDHQRYFPMF 284 Query: 294 TREGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 ++G L FI V N GG + GN RV+ ARL+DA+ F Sbjct: 285 DKDGKLMPKFITVRN-----GGKEHLDIVTHGNERVLRARLDDAVFF------------- 326 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI--AQLIDAD 407 F+ D K L Q R + +V F +G ++ R++ L + A ++AD Sbjct: 327 -------FDNDRKKSLAQH--REGLHEVAFQHGLGNMYDKTERLQKLCDVLVKATGLEAD 377 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V+RA +LSKADL T +V EF ELQG +GKEYA+L NE AI E PR + Sbjct: 378 AKAVERAALLSKADLVTGMVTEFTELQGTMGKEYALLDNEGEKVAQAIGEQYMPRFAGDE 437 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADKLD ++ ++ P+GS+DPYALRR LGI+ I+ + + PL Sbjct: 438 LPQSNEGRILAVADKLDNIVATFSRGMAPTGSQDPYALRRQALGILNIVADGDVHFPLRA 497 Query: 528 F-----------IEDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTI 570 +E++ +L FF R K L D+ +R+D+++A+L P D+L I Sbjct: 498 VLAETLKNLPVEVENEARLLDEVADFFAQRAKNMLLDKGVRYDVVDAVLAAPGLDDLADI 557 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 L+ + + K + + R+ I KN + + AEK LY Sbjct: 558 FVRADALSAYLETEKAADSIQAFTRVENI-----SKNNVVEAPVDAALFQDAAEKALYEA 612 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++Y + + P+ FFD V+V D +V++NRL+LL +K Sbjct: 613 VEKVAAASAPLAADRKYADLLAANDELAAPVNAFFDAVMVMDKDEKVKNNRLALLNQVKK 672 Query: 691 IILIVINVQKIV 702 + V ++ ++V Sbjct: 673 QVNQVADLSQLV 684 >gi|306830602|ref|ZP_07463768.1| glycyl-tRNA synthetase beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304427249|gb|EFM30355.1| glycyl-tRNA synthetase beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 679 Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 206/701 (29%), Positives = 351/701 (50%), Gaps = 84/701 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGL-TTDDIEFRE--VKGEEYVYVTKHEAGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 DI-PEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H ++ S D Y DL V+ D + R++ I+N + A +++ Sbjct: 181 GRVSRGHRFLG-HETEIASADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKAQNVQVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ LK + L Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQK-------LKIADL---------- 341 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 342 ---VAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRL 542 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I+ NL D L Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELID--NLYALSFDSL 514 Query: 543 KLYLH----------------DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Y H + + D+ EA+L N + ++++ + ++K Sbjct: 515 T-YEHKAEVMDFIRARVEKMMSKSVSKDIKEAVLAGSN---FVVAEMLEAADALVEASKA 570 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDH 644 + + + + ++ + EK +++++ S L E EK L ++ ++ S Sbjct: 571 ADYKAAVESLSRVFNLAEKAPADVTVDAS----LFENDEEKALAQAAAEL--NLSGSASD 624 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 K L ++ I+ FFD +V VD+ V++NRL++L Sbjct: 625 KLAQ-----LFALSPVIDKFFDNTMVMVDNEAVKNNRLAIL 660 >gi|94989012|ref|YP_597113.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS9429] gi|229558578|sp|Q1JKK0|SYGB_STRPC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94542520|gb|ABF32569.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS9429] Length = 679 Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 205/706 (29%), Positives = 350/706 (49%), Gaps = 94/706 (13%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIED 122 G KA GF+R GL T + I+ KG+ Y+ V + KP + + Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAK---E 128 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD + Sbjct: 129 VLLGVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLD 177 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G ++ GHRF + S D Y DL V++D + R+ I+ L G++ Sbjct: 178 IHSGRVSRGHRFLGTE-TTITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQ 236 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D+DLL E++ LVE+ FMG+F+ KYL +PEE++ ++K +Q+ FV R + G L Sbjct: 237 VDIDEDLLNEVLNLVEFPTAFMGNFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPN 296 Query: 303 FILV--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNL 359 F+ V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 297 FVSVRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL------------ 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIV 416 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA Sbjct: 342 ---------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQ 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 + K DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ + Sbjct: 391 IYKFDLLTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGVV 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 ++LADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 451 LALADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLS 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 N I D++ +DIR EAIL + + +++ Sbjct: 511 FDSLTYTNKADVMNFIRARVDKMMGKAAPKDIR----EAILAS---STFVVPEMLAVAEA 563 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ E + + + + + + EK + S+++ P E E L+A I Sbjct: 564 LVKASHTENYKPAVESLSRAFNLAEKAD--ASVQVDPSLFENEQENTLFAAIQGL----- 616 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ Q+ + + ++ I FFD +V +D+ +++NR+++L Sbjct: 617 -TLAGSAAQQL-EQVFALSPVINDFFDNTMVMAEDQALKNNRVAIL 660 >gi|46907686|ref|YP_014075.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes serotype 4b str. F2365] gi|47093465|ref|ZP_00231228.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|226224059|ref|YP_002758166.1| glycyl-tRNA synthetase beta chain [Listeria monocytogenes Clip81459] gi|254824483|ref|ZP_05229484.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J1-194] gi|255521273|ref|ZP_05388510.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J1-175] gi|300765601|ref|ZP_07075580.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes FSL N1-017] gi|67461979|sp|Q71ZL2|SYGB_LISMF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|259511927|sp|C1KVA5|SYGB_LISMC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|46880955|gb|AAT04252.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes serotype 4b str. F2365] gi|47018141|gb|EAL08911.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|225876521|emb|CAS05230.1| Putative glycyl-tRNA synthetase beta chain [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293593721|gb|EFG01482.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J1-194] gi|300513702|gb|EFK40770.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes FSL N1-017] gi|328465501|gb|EGF36730.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes 1816] Length = 688 Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 206/722 (28%), Positives = 351/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEMAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q ++ + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDDEGNWSKAALGFAKS---QKVAPEDLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLGKTATINQPSD-YPNALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVV 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ A E F + + + +++ I +K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNK---HADAEWFRPTIEALTRVVNISKK--YEDGVEVDPSLFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDFAGLKIVDRLKAFADLRTT----IDAYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|323127883|gb|ADX25180.1| glycyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 679 Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 208/700 (29%), Positives = 349/700 (49%), Gaps = 82/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + ++N++ + TP RL + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFENIQIFSTPRRLAARVIGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + + ++VL Sbjct: 75 AKKIALDTDGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + + +P SM W+ ++F +IRP+ ++ +L E +I Sbjct: 132 GVAEV-LTAMTFPVSMHWAK-----NSFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGKE-TTITSADSYEDDLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L FI Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFIS 299 Query: 306 V--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNLDLS 362 V N QA D +V+GN +V+ ARLED FW+ DQ + +L Sbjct: 300 VRNGNDQAIDN---VVKGNEKVLVARLEDGEFFWREDQKLQIADL--------------- 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 +A+L +V FH KIG+ E + R RV+ +A+ L + A VDRA + K Sbjct: 342 ------VAKL--ANVTFHEKIGSLTEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++L Sbjct: 394 FDLLTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAEGALPETKVGAVLAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 454 ADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDS 513 Query: 532 ------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +++ F R+ + + + D+ EA+L + + +++ +++ Sbjct: 514 LTYANKADVMSFIRARVD-KMMGKAVPKDIREAVLES---STFVVPEMLAAAEALVNASH 569 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + + + + + + EK + S+ + P + E+ L+A I S++ Sbjct: 570 KENYKPAVESLSRAFNLAEKAD--ASVRVDPSLFENDHEQALFAAIQSL------SLEGS 621 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +Q+ + + ++ I FFD +V DD+ +++NRL+LL Sbjct: 622 TENQV-EQVFALSPVINDFFDNTMVMADDQAIKNNRLALL 660 >gi|330831645|ref|YP_004394597.1| glycyl-tRNA synthetase subunit beta [Aeromonas veronii B565] gi|328806781|gb|AEB51980.1| Glycyl-tRNA synthetase beta subunit [Aeromonas veronii B565] Length = 689 Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 202/698 (28%), Positives = 325/698 (46%), Gaps = 61/698 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI + E+P + AE + L + + + ++ + +P RL L + L+ Sbjct: 6 FLVEIGTAELPPKALRSLAEAFADNFKAELTKADLAFGDVEWFASPRRLALKVSELAGEQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 66 PSKSVEKRGPAVAQAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHTAKVE 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +D+L +V A+ K+P PK MRW ++RP+ ++ +L + I+ Sbjct: 124 GRPAKDLLGELVSQALAKLPIPKMMRWGD-----KTIQFVRPVFTVTLLLDGDLVPAHIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 +D GHRF + + Y + L+E MV+ D R+ I D Sbjct: 179 GID-----SARTIRGHRFMGESEFTIDNASQYPQILQERGMVIADFMARKAKIKADVEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+A G D LLEE+ LVEW V +F++K+L +P E + T+K +QK F + Sbjct: 234 AAAFGGVADLDDALLEEVTALVEWPVVLTANFEEKFLAVPAEALVHTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D + I+ GN +VV RL DA F Sbjct: 294 SGKLLPKFIFVTNIESKDP-SQIISGNEKVVRPRLSDAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F DL + L R+ RL+ V+F ++GT +V RI + IA+ I ADVA RA Sbjct: 334 -FKTDLKQTLASRLPRLET--VLFQQQLGTVKAKVERIETVAGFIAERIGADVAQAKRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E+ + A+ E PR + +P+ ++ Sbjct: 391 LLSKCDLMTNMVGEFTDTQGVMGMHYARHDGEDEAVAVALNEQYMPRFAGDALPSGLVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+LADK DTL + I P G KDP+ALRRA +G +RI+ E ++D+ L + +E+ Sbjct: 451 AVALADKFDTLAGIFGIGMLPKGDKDPFALRRAAIGALRIMTEKQLDLDLVELVEEAVRV 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +++ F R + D I D++ A+L L +K ++ F Sbjct: 511 YGDKLTNKTVVTDVVDFMLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K E+ + P+ L+ AEK L +++ + Sbjct: 571 RTLDAALALAAANKRVSNILA---KVEGELPTAVKPELLVDAAEKALATQVAELQAELAP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 Y L ++ EP++ FF++V+V DD ++ Sbjct: 628 LFAAGDYQAALTRLAALREPVDTFFNEVMVMADDEALK 665 >gi|304412716|ref|ZP_07394319.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS183] gi|307305819|ref|ZP_07585565.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica BA175] gi|304348926|gb|EFM13341.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS183] gi|306911312|gb|EFN41738.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica BA175] Length = 689 Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 209/699 (29%), Positives = 331/699 (47%), Gaps = 61/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELAKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELVHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 293 DAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 334 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L +Q Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAQA 509 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q LL + E ++ FF+ V+V DD ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALK 665 >gi|55738463|gb|AAV62104.1| glycyl-tRNA synthetase beta subunit [Streptococcus thermophilus CNRZ1066] Length = 714 Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 206/700 (29%), Positives = 349/700 (49%), Gaps = 77/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 51 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 110 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL TI D + ++ KG+ Y+ V + + + ++VL Sbjct: 111 SKKIALDADGNFSKAAQGFVRGKGL-TIDDIEFRE--VKGEEYVYVTKHEAGKSAKEVLA 167 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 168 GI-PEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 216 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 217 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 275 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 276 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 335 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ LK + Sbjct: 336 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQK------------LK--------I 374 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 375 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 432 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 433 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 492 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 493 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 552 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + D+++ +AK + Sbjct: 553 DNQAEVIRFIKARVDKMMG--STPKDIKEAVLSGSN---FVVADMLEAAEALSEAAKTDG 607 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + + EK + ++++ S L E ++ + + S K Sbjct: 608 YKAAVESLSRAFNLAEKADTSVAVDAS----LFENDQEKALAQAAESLELTGSASDKLAQ 663 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L + I+ FFD +V DD V++NRL+LL + Sbjct: 664 -----LFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSAL 698 >gi|306832846|ref|ZP_07465980.1| glycyl-tRNA synthetase beta subunit [Streptococcus bovis ATCC 700338] gi|304424985|gb|EFM28117.1| glycyl-tRNA synthetase beta subunit [Streptococcus bovis ATCC 700338] Length = 679 Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 206/701 (29%), Positives = 351/701 (50%), Gaps = 84/701 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVSGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGL-TTDDIEFRE--VKGEEYVYVTKHEAGKAAKEVLI 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 DI-PEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H ++ S D Y DL V+ D + R++ I+N + +++ Sbjct: 181 GRVSRGHRFLG-HETEIASADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKVQNVQVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ LK + L Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQK-------LKIADL---------- 341 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 342 ---VAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRL 542 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I+ NL D L Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELID--NLYALSFDSL 514 Query: 543 KLYLH----------------DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Y H + + D+ EA+L N + ++I+ + ++K Sbjct: 515 T-YEHKAEVMDFIRARVEKMMSKSVSKDIKEAVLAGSN---FVVAEMIEAADALVEASKA 570 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDH 644 + + + + ++ + EK +++++ S L E EK L ++ ++ S + Sbjct: 571 ADYKAAVESLSRVFNLAEKTPADVTVDAS----LFENDEEKALAQAAAEL--NLSGSAND 624 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 K L ++ I+ FFD +V VD+ V++NRL++L Sbjct: 625 KLAQ-----LFALSPVIDKFFDNTMVMVDNEAVKNNRLAIL 660 >gi|257095241|ref|YP_003168882.1| glycyl-tRNA synthetase subunit beta [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047765|gb|ACV36953.1| glycyl-tRNA synthetase, beta subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 690 Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 212/695 (30%), Positives = 342/695 (49%), Gaps = 68/695 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + +E + + L + + Y TP RL + + ++ Sbjct: 6 LIELRTEELPPKSLKLLSEAFADTVFSALAAQQFTADDSVCTPYATPRRLAMTITHVAAR 65 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++I ER GP V +G +A++GF+R+ G+ D K K + ++A K Sbjct: 66 QPDRILERKGPAVASGVDGEGRPTRALEGFMRAAGVTF--DQLHKTSDGKAEYFVARQAK 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + L IV A++K+P PK MRW S ++RP+ ++ + I Sbjct: 124 AGEPLAAHLAEIVAQALKKLPIPKVMRWGD-----SEHQFVRPVHGLILL-----HGTSI 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ + G T GHRF A I V + Y L V+ RR AI Sbjct: 174 VPGEVLGLASGRSTLGHRFLASGDIVVDNPAAYAPSLLAGKVIASFADRRAAIAEQLAAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LL+E+ LVEW V++G F+ +YL +P+E + LT++ NQK F Sbjct: 234 AGKLGARINPADGLLDEVTALVEWPAVYVGGFEAEYLDVPQECLILTMQQNQKYFPLLDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F++VSN+Q D A+I+QGN RVV RL DA F+ +D+ N Sbjct: 294 AGKLLNKFLIVSNMQVDDP-ASIIQGNERVVRPRLADARFFYDQDRKN------------ 340 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 R+ RL VV+H K+G+ G+R R+ + + IA+ + AD L +RA Sbjct: 341 --------GFATRVVRLG--SVVYHNKLGSLGDRAQRLGRVARSIAEKLHADANLAERAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 + SK DL T++V EFPELQG +G+ Y + + DAIE+H +PR + +P I+ Sbjct: 391 LFSKIDLLTDMVGEFPELQGIMGRYYLLHEGGLPVVADAIEQHYRPRFAGDALPAGNIAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 +LADKLD L+ F+ I + P+G KDP+ LRRA LG++RI++E + + L++ I+ Sbjct: 451 AAALADKLDALVGFFGIGQPPTGDKDPFGLRRAALGVLRILMETPLPLDLAELIDEAKST 510 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 D+ L+ F DRL+ L D D++EA+L + + + ++ Sbjct: 511 LIQQGVQLEAVDEPLLTFMLDRLRGMLRDAGHSVDVVEAVLAQRPTRIDLVPARLAAVSG 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTH 637 F + + + KRI IL +K E E P LLE AEK L+ + Sbjct: 571 FQALPEALALAAANKRIGNIL----RKTEEAFPE--PDIALLEEDAEKDLFQRVLLIAPL 624 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 ++ + ++ Y ++ S+ ++ FFD+V+VNV Sbjct: 625 VRSHVANEDYADALKVVASVRPEVDRFFDEVMVNV 659 >gi|319943023|ref|ZP_08017306.1| glycyl-tRNA synthetase beta subunit [Lautropia mirabilis ATCC 51599] gi|319743565|gb|EFV95969.1| glycyl-tRNA synthetase beta subunit [Lautropia mirabilis ATCC 51599] Length = 737 Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 325/696 (46%), Gaps = 93/696 (13%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQ 98 Y TP RL + L G+ + + + GP V G A+ + G + +S Sbjct: 55 YATPRRLAVRLPGVRAQADAREIQIKGPSVAVGLDAQGQPTMALIKWAEKQGAE-VSALT 113 Query: 99 IKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRP 158 D K+ DV+ +P ++ DV+ I+ + ++P PK M + ++ S++RP Sbjct: 114 RGHDGKQ-DVFYWSSTQPGAVLADVIGEIIVETLAQLPIPKFMTYQLADG-LTTVSFVRP 171 Query: 159 LKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMV 217 ++ + + ++ + + IT GHRF + PI +++ D Y R L E+ V Sbjct: 172 AHRLVVL-----HGDTVLPCTILGLAADRITDGHRFLSSGPITLENADSYARQLREQGHV 226 Query: 218 LLDPECRRNAILND-AHRLASAVGLELVEDKD------LLEEIIGLVEWVQVFMGSFDKK 270 + + RR I N+ AH G+ V D++ LL+E+ LVEW V+ G FD Sbjct: 227 EPEYQARRVMIANELAHSSQQNGGILAVNDEEQQQVTALLDEVAALVEWPAVYTGQFDPA 286 Query: 271 YLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARL 330 +L +P+E + L+++TNQ+ F G L N F++VSN++ D + I+ GN RVV RL Sbjct: 287 FLAVPQECLILSMRTNQRYFPLFETNGKLKNQFLIVSNMRIDDP-SGIIDGNERVVRPRL 345 Query: 331 EDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERV 390 DA F F+ D + L R+ +L VV+HA++GTQ ER Sbjct: 346 ADAQFF--------------------FDQDRRETLASRLPQL--AQVVYHARLGTQAERS 383 Query: 391 SRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENIS 450 RIR L +A A VA +RA L+K DL T +V EFPELQG +G+ YA E+ + Sbjct: 384 ERIRRLAAALAPATGASVADAERAAQLAKTDLLTGMVGEFPELQGTMGRYYARHDGESEA 443 Query: 451 CCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATL 510 DAI EH +PR + +P + + ++LADKL+TL W I ++P+G KDP+ALRR L Sbjct: 444 VADAIAEHYQPRFAGDALPASPTGLALALADKLETLAGIWGIGQRPTGDKDPFALRRHAL 503 Query: 511 GIIRIILENKIDIPLSQFIEDQ-------------------------------------- 532 G++RI++E K+ + L +E Sbjct: 504 GVVRILIEGKLTLSLPALLEQAFSVFDKLPAPAAADTEPSDKAAATGKKGRKEAVPQPFT 563 Query: 533 ----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 L F DRL+ YL DR IEA+L D L + + L F E Sbjct: 564 ADVPGLSAFVADRLRSYLRDRGFAGTDIEAVLATGLDRLDLLEARLAALAAFRRLPAFES 623 Query: 589 FLLSAKRIFQIL---AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 + KRI IL A E + + S + P L AE+ L + +Q + + Sbjct: 624 LTAANKRIGNILRKSAGEGAADDKAS--VDPALLKEAAERDLNDALVKLQPQVQAHLQQQ 681 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + L ++ P++ FF+QV+VN +D +R NR Sbjct: 682 DFTAALQALAALQAPVDAFFEQVMVNAEDPALRRNR 717 >gi|71909147|ref|YP_286734.1| glycyl-tRNA synthetase, beta subunit [Dechloromonas aromatica RCB] gi|123774244|sp|Q47A67|SYGB_DECAR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71848768|gb|AAZ48264.1| glycyl-tRNA synthetase beta chain [Dechloromonas aromatica RCB] Length = 712 Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 212/741 (28%), Positives = 356/741 (48%), Gaps = 77/741 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K E S L LK G+ ++ Y +P RL ++ ++ Sbjct: 5 NLLVELFVEELPPKALKKLGEAFSAALANSLKNAGLAPATASITAYASPRRLAAHVTDVA 64 Query: 61 PHSPEK-IEERLGP-RVG--AGKKAIDGFLRS-TGLQTISDCQI-------KKDPKKGDV 108 + +K + ++L P VG A A L+ GL +D +++ K DV Sbjct: 65 AVAADKPVAQKLMPVAVGLDAAGNATPALLKKLAGLGIDADAAASVVASLRRENDGKADV 124 Query: 109 -YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 + L K L E + K I A+ +P PK M + S+ +++RP ++ + Sbjct: 125 LFFDSLAKGATLAEGLQKAI-EAALAALPIPKVMTYQLQDG-WSSVNFVRPAHGLVALHG 182 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 + ++ L+ G T+GHRF A P+ + D Y L ++ R Sbjct: 183 GDVVPVAVLGLN-----AGRETHGHRFEATVDPVVFANADEYASKLATDGAVIASFAERR 237 Query: 227 A-----ILNDAHRLASAVGLEL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 A + A + A G L ++D+ LL+E+ LVE V +G F++++L +P+E + Sbjct: 238 AEIARQLEGAAAKAGQATGAALRPIDDEALLDEVTALVERPNVLIGQFEQEFLAVPQECL 297 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 LT+K NQK F G L N F++VSNI D +A++ GN RVV RL DA F+ + Sbjct: 298 ILTMKANQKYFPLLDATGKLTNKFLVVSNISPEDA-SAVIGGNERVVRPRLADAKFFFDQ 356 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K L+ R+ + + VV+H K+GTQGER+ R+ + + Sbjct: 357 DRK--------------------KSLESRV--IGLSKVVYHNKLGTQGERMQRVAAIARA 394 Query: 400 IAQLIDAD-VAL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 I + + + +AL ++A VL+KADL T++V EFPELQG +G+ YA+ DA+E+ Sbjct: 395 IGESLGGEALALHAEQAAVLAKADLLTDMVGEFPELQGTMGRYYALHDGLAAEIADAVED 454 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H KPR + +P + V+LADKL+TL+ + I + P+G +DP+ALRR LG+IR++ Sbjct: 455 HYKPRFAGDTLPRGIVGTVVALADKLETLVGMFGIGQIPTGDRDPFALRRHALGVIRMLA 514 Query: 518 ENKIDIPLSQFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 EN + +PL ++ + L F +DRL L ++ ++A++ Sbjct: 515 ENNLALPLDHLLQTAAAPFASVDGFKAAEAPLADFIYDRLAGSLREQGYTAQEVDAVVSQ 574 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 L I + + F + + KR+ IL K E ++E LL+ Sbjct: 575 RPQRLGDIPKRLAAVRAFSGLPESAALAAANKRVGNIL-----KKVENAVEAVVDNALLK 629 Query: 623 --AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 AE L+ + + + Y + L ++ P++ FFD V+VN +D +R N Sbjct: 630 EAAEIALHDALVEVVPQADAAFVTGDYSESLQALAALRAPVDAFFDDVMVNAEDPALRAN 689 Query: 681 RLSLLQYIKNIILIVINVQKI 701 RL LL + + V ++ K+ Sbjct: 690 RLGLLAKLHAAMNQVADISKL 710 >gi|170017337|ref|YP_001728256.1| glycyl-tRNA synthetase, beta subunit [Leuconostoc citreum KM20] gi|238688968|sp|B1MZ60|SYGB_LEUCK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169804194|gb|ACA82812.1| Glycyl-tRNA synthetase, beta subunit [Leuconostoc citreum KM20] Length = 686 Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 219/737 (29%), Positives = 349/737 (47%), Gaps = 88/737 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L + +++ + TP RL L L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTSSESQLVARTKEFLAAHRLTVGDIKPFSTPRRLALQLCDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP V G KA GF R G + ++ D Y+ + Sbjct: 61 EESEALSEEKRGPSVERAKDENGEWSKAAQGFARGQG-------ATPEAFEERDGYVWLT 113 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L I + ++ + M+W+ HS F ++RP++ ++ +L Sbjct: 114 KHTTGVPANQILSQIGEEVVSQMKFTTYMKWAN-HS----FLYVRPIRWLVALL-----D 163 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I+ ++ +I G +T GHRF + + + Y L+ A VL D E R+ I + Sbjct: 164 EQVINFNVLDIATGRVTRGHRFLSTEHVTISDAQAYEETLQSAYVLADAENRKAQIKSQL 223 Query: 233 HRLAS----AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +A+ + L+ +DLLEE+ +VEW F GSFD+KYL +P+E++ +++ +Q+ Sbjct: 224 ETIANRNHWVLSLDNAPAQDLLEEVNNIVEWPTAFSGSFDQKYLEVPDEVLITSMREHQR 283 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNL 344 F R G L F+ V N G A ++ GN +V+ ARLEDA F++ DQ Sbjct: 284 FFYVRDTTGKLLPHFLSVRN-----GDTAHLDNVIAGNEKVLVARLEDAEFFYREDQQ-- 336 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K + MA++ L VFH KIGT E + R+ +L +K+A + Sbjct: 337 ------------------KKIADYMAKVKTL--VFHEKIGTVYEHMQRVGLLAEKLADAL 376 Query: 405 DADVAL---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 D D + RA + K DL T +V EF ELQG +G+ YA L EN AI EH P Sbjct: 377 DFDDDKKTDLARAAEIYKFDLMTGMVGEFDELQGVMGEHYARLFGENERVATAIREHYMP 436 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 N+ + + +++ADKLD ++ F+A N PSGS DPY LRRA G++R + Sbjct: 437 TSANGNIAKSDVGAVLAIADKLDAIVTFFAANLIPSGSNDPYGLRRAATGVVRTLTTKHW 496 Query: 522 DIP----LSQFIEDQNLIL----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 I L++F+ + F DR++ D DIR D++ A DN Sbjct: 497 HIALQPVLAEFMAATGTVTASADLMAVLSFVVDRVRKLALDDDIRQDIVSA----GTDNF 552 Query: 568 LT--IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 T IV L + + A F + ++ + EK +SL ++PQ E EK Sbjct: 553 ATADIVYLTDRIQVLANHAHDNNFREVISALTRVARLAEKT--PVSLNVNPQLFENETEK 610 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 LYA S+ E+ + +Q L ++ PI +FD +VNVD+ ++++NR + L Sbjct: 611 ALYAATSELQLVALEANGAEALYQA---LAALQMPISAYFDATMVNVDNEQIKNNRYAQL 667 Query: 686 QYIKNIILIVINVQKIV 702 I +I + N++ IV Sbjct: 668 NIINQLIAGLGNLEDIV 684 >gi|171778117|ref|ZP_02919374.1| hypothetical protein STRINF_00209 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283099|gb|EDT48523.1| hypothetical protein STRINF_00209 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 679 Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 203/699 (29%), Positives = 349/699 (49%), Gaps = 80/699 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLKEKRLAFEGIQTFSTPRRLAVRVLGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDAEGNFTKAAQGFVRGKGL-TTDDIEFRE--VKGEEYVYVTKHEAGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 DI-PEILSVMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H ++ + D Y DL + V+ D + R++ I+N + A + + Sbjct: 181 GRVSRGHRFLG-HETEITTADSYEEDLRKVFVIADAKERQDMIVNQIKAIEKAQNVRVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDLDGNLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N + +++GN +V+ ARLED FW+ DQ LK + L Sbjct: 300 VRNGN-ENHIENVIKGNEKVLVARLEDGEFFWREDQ-------KLKIADL---------- 341 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 342 ---VAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEENKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRL 542 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + ++ NL D L Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELVD--NLYALSFDSL 514 Query: 543 KLYLH----------------DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Y H ++ + D+ EA+L N + ++++ + ++K Sbjct: 515 T-YEHKAEVMDFIRARVEKMMNKSVSKDIKEAVLAGSN---FVVAEMLEAADALVEASKA 570 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + + + + ++ + EK ++ + + EK L +D ++ S K Sbjct: 571 EGYKAAVESLSRVFNLAEKAQAGVA--VDANLFENDEEKALAQAAADL--NLTGSASDKL 626 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FFD +V VD+ V++NRL++L Sbjct: 627 AQ-----LFALSSVIDKFFDNTMVMVDNEAVKNNRLAIL 660 >gi|237743228|ref|ZP_04573709.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 7_1] gi|229433524|gb|EEO43736.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 7_1] Length = 686 Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 208/726 (28%), Positives = 358/726 (49%), Gaps = 87/726 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A DL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALADLKTNFERKLKNNRIKFDGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Y+A R Sbjct: 62 QEDLDELSIGPSRERAYKNGALTKAGEGFLKAHRIEEEQIEIIKND--KGE-YIAFKRFS 118 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E +L I+ + + +PKSMRWS + + RP++ L + +K+ Sbjct: 119 KGKPTETILPEILKALVLEETFPKSMRWSDKN-----IRFARPIEWFLALY-----GDKV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ I N + GHRF +V S++ Y++ + E V++D RR I Sbjct: 169 VDFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMI------- 220 Query: 236 ASAVGLELVEDKD------LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + L+ED+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ Sbjct: 221 EEMINNSLLEDEKADVDEALLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRY 280 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 281 FPILSKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED--------- 329 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L PLD + +L VVF +GT ++V R + + + + + + Sbjct: 330 -----------LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYM 376 Query: 410 LVD--RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR Sbjct: 377 KEDILRTVKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQG 436 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L Sbjct: 437 DLLPSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISL 496 Query: 526 SQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 ++ + +++ F R+ D R D+I A+L + DN Sbjct: 497 KDLVKVSLDTLEADKVLKADRAKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADN 556 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + T +++++ + E S K + L + KR+ I+ K N++I+ I + + EK Sbjct: 557 ITTALEIVRVITEKLSKDKMQALLQAVKRVANIM----KGNKDIT--IKEKLFKTDIEKT 610 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY G I++S+ K Y + L ++ I+ +FD V+V +D+ VRDNR++ L Sbjct: 611 LYTDSKKVGEEIEKSIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRINQLT 670 Query: 687 YIKNII 692 YI N+ Sbjct: 671 YIMNLF 676 >gi|254932643|ref|ZP_05266002.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes HPB2262] gi|293584202|gb|EFF96234.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes HPB2262] gi|332311899|gb|EGJ24994.1| Glycyl-tRNA synthetase beta subunit [Listeria monocytogenes str. Scott A] Length = 688 Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 206/722 (28%), Positives = 350/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEMAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q ++ + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDDEGNWSKAALGFAKS---QKVAPEDLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLGKTATINQPSD-YPNALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVV 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + Sbjct: 504 SRIVDMERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGNPNMIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ A E F + + + +++ I +K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNK---HADAEWFRPTIEALTRVVNISKK--YEDGVEVDPSLFENEYEQALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKFDFAGLKIVDRLKAFADLRTT----IDAYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|117618734|ref|YP_854662.1| glycyl-tRNA synthetase subunit beta [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166227909|sp|A0KEJ9|SYGB_AERHH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|117560141|gb|ABK37089.1| glycyl-tRNA synthetase, beta subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 689 Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 206/698 (29%), Positives = 327/698 (46%), Gaps = 61/698 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI + E+P + AE + L L + + + ++ + +P RL L + L+ Sbjct: 6 FLVEIGTAELPPKALRSLAEAFADNLKSELTKADLAFGDVEWFASPRRLALKVSELAGEQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 66 PSKSVEKRGPAVAQAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHTAKVE 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +D+L +V A+ K+P PK MRW ++RP+ ++ +L E I+ Sbjct: 124 GRPAKDLLGELVSQALAKLPIPKMMRWGD-----KTIQFVRPVFTVTLLLDGELVPAHIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 +D GHRF + + Y + L+E MV+ D R+ I DA Sbjct: 179 GID-----SARTLRGHRFMGESEFTIDNASQYPQILQERGMVIADFMARKVKIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+A G D LLEE+ LVEW V +F++K+L +P E + T+K +QK F + Sbjct: 234 AAAFGGVADLDDALLEEVTALVEWPVVLTANFEEKFLAVPAEALVHTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D + I+ GN +VV RL DA F Sbjct: 294 NGKLLPKFIFVTNIESKDP-SQIISGNEKVVRPRLSDAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F DL + L R+ RL+ V+F ++GT +V RI + IA+ I ADVA RA Sbjct: 334 -FKTDLKQTLASRLPRLET--VLFQQQLGTVKAKVERIETVAGFIAERIGADVAQAKRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E+ + A+ E PR + +P+ ++ Sbjct: 391 LLSKCDLMTNMVGEFTDTQGVMGMHYARHDGEDEAVAVALNEQYMPRFAGDALPSGLVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+LADK DTL + I P G KDP+ALRRA +G +RI+ E ++D+ L + +E+ Sbjct: 451 AVALADKFDTLAGIFGIGMLPKGDKDPFALRRAAIGALRIMTEKQLDLDLVELVEEAVRV 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +++ F R + D I D++ A+L L +K ++ F Sbjct: 511 YGDKLTNKTVVTDVVDFMLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ ILA K E+ + P+ L+ AEK L +++ + Sbjct: 571 RSLDAALALAAANKRVSNILA---KVEGELPTAVKPELLVDAAEKALATQVAELQAELAP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 Y L ++ EP++ FF++V+V DD ++ Sbjct: 628 LFAAGDYQAALTRLAALREPVDTFFNEVMVMADDEALK 665 >gi|325977583|ref|YP_004287299.1| glycyl-tRNA synthetase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177511|emb|CBZ47555.1| glycyl-tRNA synthetase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 679 Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 206/701 (29%), Positives = 351/701 (50%), Gaps = 84/701 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGL-TTDDIEFRE--VKGEEYVYVTKHEAGKAAKEVLV 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P +M W+ + F +IRP+ ++ +L E +I Sbjct: 132 DI-PEILSAMTFPVNMHWAN-----NTFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H ++ S D Y DL V+ D + R++ I+N + A +++ Sbjct: 181 GRVSRGHRFLG-HETEIVSADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKAQNVQVEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DDELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ LK + L Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQK-------LKIADL---------- 341 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRAIVLSKADL 422 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 342 ---VAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRL 542 LDT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + I+ NL D L Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELID--NLYALSFDSL 514 Query: 543 KLYLH----------------DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Y H + + D+ EA+L N + ++++ + ++K Sbjct: 515 T-YEHKAEVMDFIRARVEKMMSKSVSKDIKEAVLAGSN---FVVAEMLEAADALVEASKA 570 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDH 644 + + + + ++ + EK +++++ S L E EK L ++ ++ S Sbjct: 571 ADYKAAVESLSRVFNLAEKAPADVTVDAS----LFENNEEKALAQAAAEL--NLSGSASD 624 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 K L ++ I+ FFD +V VD+ V++NRL++L Sbjct: 625 KLAQ-----LFALSPVIDKFFDNTMVMVDNEAVKNNRLAIL 660 >gi|149375623|ref|ZP_01893392.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter algicola DG893] gi|149360025|gb|EDM48480.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter algicola DG893] Length = 695 Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 200/711 (28%), Positives = 345/711 (48%), Gaps = 72/711 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + ++ + + L+E G+ + + + P RL + ++ L Sbjct: 5 DFLVELGTEELPPKALKPLSDAFTRGITHGLEEAGIQFGKVEAFAAPRRLAVRVRDLEDA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K E+ GP V G +A+ GF S G+ ++ D VY + + Sbjct: 65 QPDKPVEKRGPAVKAAFDDSGNPTRALTGFATSLGVTPDQLDTLETDKGAWVVYRTIEKG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +++ +V ++ +P PK MRW + ++RP+ + + K+ Sbjct: 125 --RPTVELMPELVDQSLAALPIPKRMRWGAHRT-----EFVRPVHWAILLF-----GNKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ID + + GN T GHRFH P + V + Y L +E V+ D RR I + Sbjct: 173 IDTPIMGLTPGNKTRGHRFHCPKSLIVPTPGDYEVVLRQEGYVIADFAERREQIRDGVTA 232 Query: 235 LASA-VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A G + V D+DLL+E+ L EW MG F++++L +P E + ++K +QK F Sbjct: 233 IAKKEAGGQAVIDEDLLDEVTALNEWPVPLMGRFEERFLEVPAEALISSMKEHQKYFHVV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + +G + FI V+N+++ D ++ GN +V+ RL DA F+ D +++ Sbjct: 293 SADGRMLPLFITVANLESKDP-QQVISGNEKVIRPRLSDAAFFYDTD----------RKT 341 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L+ +D KP +VF K+G+ ++ R+ L KKIA I +D L +R Sbjct: 342 RLEDRIDQLKP------------IVFQDKLGSIYDKSVRVAALAKKIADAIGSDPVLAER 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL TE+V EF +LQG +G+ YA EN A+ E PR +++P Sbjct: 390 AAMLAKTDLVTEMVLEFTDLQGIMGQYYAANDGENEDVASALNEQYMPRFAGDDLPATLT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----I 529 V++AD++D+L+ + IN+ PSG++DP+ LRRA+LG++RII+E ++ + L + Sbjct: 450 GCAVAIADRIDSLVGLFGINQPPSGTRDPFGLRRASLGVLRIIIERELPLDLQTLCEWAV 509 Query: 530 EDQN----------LILFFHDRLKLYLHDRDIRHDLIEAI-----LRP-ENDNLLTIVDL 573 E N ++ + +R + + ++ I ++ A+ RP + D + V+ Sbjct: 510 EQHNSFTEPKVANTVVDYMLERFRAHYEEQGISAEVYLAVHARRPTRPLDFDRRVKAVEA 569 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L E + A KR+ IL ++ I I + L +AE L I Sbjct: 570 FRQLPEALALAGAN------KRVSNILT--KQGGDSIGESIDSELLQDKAEITLADQIRQ 621 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + Y L S+ EP++ FFD+V+V DD VR+NRL++ Sbjct: 622 QADKALPLFEKGDYATALSSLASLREPVDNFFDEVMVMADDEAVRNNRLAM 672 >gi|237806784|ref|YP_002891224.1| glycyl-tRNA synthetase, beta subunit [Tolumonas auensis DSM 9187] gi|259511933|sp|C4L762|SYGB_TOLAT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|237499045|gb|ACQ91638.1| glycyl-tRNA synthetase, beta subunit [Tolumonas auensis DSM 9187] Length = 690 Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 209/720 (29%), Positives = 335/720 (46%), Gaps = 63/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + K A+ + L + G+ +Q ++ + P RL L + L+ Sbjct: 5 NFLIELGTEELPPKALRKLAQAFADNFTAELDKAGLAHQGVQWFAAPRRLALKVAALADK 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA-VLR 114 +K E+ GP V A A G+ +S G++ ++ D + VY A V Sbjct: 65 QADKQVEKRGPAVSAAFDAAGNPTPAAAGWAKSNGIEVAQADRLATDKGEWLVYRANVAG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P +L + A+ +P PK MRW + +IRP+ + LC+L + Sbjct: 125 QP---TTGLLPAMAATALAGLPIPKPMRWGAKRT-----QFIRPVHT-LCMLFGAE---- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY-IRDLEEAMVLLDPECRRNAILNDAH 233 ++D ++ + I GHRF ++ D Y LE+ V D E R+ I A Sbjct: 172 LVDGEILGLRSARIIRGHRFMGEAQFEISHADQYPALLLEKGKVQADYETRKAFIKAGAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G ++ LLEE+ LVEW + +F++K+L +P E + T+K +QK F Sbjct: 232 AAAQQLGGIADIEESLLEEVTSLVEWPVILTATFEEKFLAVPAEALVHTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI VSNI++ D A I+QGN RVV RL DA F Sbjct: 292 DNNGKLLPNFIFVSNIESKDP-AQIIQGNERVVRPRLSDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D L R+ LD V+F ++GT ++ RI + IA I ADV R Sbjct: 334 ---FNTDKKHSLASRLESLDT--VLFQQQLGTLKDKSVRIAEMSAFIAAQIGADVEHATR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA +E A+ E PR +N+P + Sbjct: 389 AGLLSKCDLMTNMVMEFTDTQGVMGMHYARHDHEAEDVAVALNEQYMPRFAGDNLPNGLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + V++ADKLDTL + I + P G KDP+ALRRA +G +RII+E ++D+ L + Sbjct: 449 ACAVAIADKLDTLAGIFGIGQAPKGDKDPFALRRAAIGTLRIIVEKQLDLDLVDVVSKAA 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ F R + + I D+I+A+L +K ++ Sbjct: 509 ELYDGKISNKSVVDEVVDFMLGRFRASYQEAGIAVDVIQAVLARRPTRPADFDARVKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K + ++ + L AE+ L ++ T + Sbjct: 569 HFRTLDAAEALAAANKRVSNILA---KFDGKLKDSVDAALLQDPAEQVLAQQVAAMETKL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L ++ E ++ FFD+V+V DD ++ NRL+LL ++ + L ++ Sbjct: 626 APLFANGEYQLALTELAALREAVDTFFDKVMVMADDEALKLNRLTLLARLQALFLQAADI 685 >gi|315303195|ref|ZP_07873853.1| glycyl-tRNA synthetase, beta subunit [Listeria ivanovii FSL F6-596] gi|313628438|gb|EFR96913.1| glycyl-tRNA synthetase, beta subunit [Listeria ivanovii FSL F6-596] Length = 688 Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 207/723 (28%), Positives = 345/723 (47%), Gaps = 83/723 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + E L + L E + + ++ + TP RL + + ++ Sbjct: 4 DFLLEIGLEEMPAQYVTSSVEQLKKRMTDWLHENQITFSEIKTFSTPRRLTVLVSNMAEE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF RS Q+I+ + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDEEGNWSKAALGFARS---QSINPADLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPVAIQKV----PWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 K +I ++P +QKV +P SM W + +IRP+K ++ + E Sbjct: 118 KKEVIGKKTTALLP-QLQKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMFGTE-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ + N++ GHRF +Q D Y L E V++D R+ AI Sbjct: 170 ---VIPFEITGVVTSNMSRGHRFLGKTATIMQPSD-YQNALLEQFVVVDATARKEAIAGQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ ++ ED DLLEE+ LVE+ V G+F++ YL LPEE++ T+K +Q+ F Sbjct: 226 LKELAALENWQIKEDTDLLEEVTNLVEYPTVLAGNFEEIYLELPEEILITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +++ L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQDDKLLPHFVTVRN-GNHENLETVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 ---------LKMTIDEAVAKLP--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWKEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDIIRLTDIYKFDLVTNVVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TL+ F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSLIAIADKLETLVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLEL 502 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L + IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGAVELPSDDVKKEVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +VD + LN+ S + + R+ I K E +E+ P E E+ L+ Sbjct: 563 LVDRAQILNKHVESEWFRPTIEALTRVVNI-----SKKYEEGVEVDPALFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R L +I + +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKYDYASLTIVERLKAFAGLRTTIDD----YFDNTLVMSDNLELKNNRLALLFELA 673 Query: 690 NII 692 + I Sbjct: 674 SFI 676 >gi|256027636|ref|ZP_05441470.1| glycyl-tRNA synthetase beta chain [Fusobacterium sp. D11] gi|289765594|ref|ZP_06524972.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D11] gi|289717149|gb|EFD81161.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D11] Length = 686 Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 206/726 (28%), Positives = 358/726 (49%), Gaps = 87/726 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A DL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALADLKTNFERKLKNNRIKFDGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ +K D KG+ Y+A R Sbjct: 62 QEDLDELSIGPSRERAYKNGALTKAGEGFLKAHRIEEEQIEIVKND--KGE-YIAFKRFS 118 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E +L I+ + + +PKSMRWS + + RP++ L + +K+ Sbjct: 119 KGKPTETILPKILKALVLEETFPKSMRWSDKN-----IRFARPIEWFLALY-----GDKV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ I N + GHRF +V S++ Y++ + E V++D RR I Sbjct: 169 VDFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMI------- 220 Query: 236 ASAVGLELVEDKD------LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + L+ED+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ Sbjct: 221 EEMINNSLLEDEKADVDEALLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRY 280 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 281 FPILSKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED--------- 329 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L PLD + +L VVF +GT ++V R + + + + + + Sbjct: 330 -----------LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYM 376 Query: 410 LVD--RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR Sbjct: 377 KEDILRTVKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQG 436 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L Sbjct: 437 DLLPSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISL 496 Query: 526 SQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 ++ + +++ F R+ D R D+I A+L + DN Sbjct: 497 KDLVKVSLDTLEADKVLKADRAKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADN 556 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + T +++++ + E S K + L + KR+ I+ K N++++ I + + EK Sbjct: 557 ITTALEIVRVITEKLSKDKMQALLQAVKRVANIM----KGNKDVT--IKEKLFKTDVEKT 610 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY G I++S+ K Y + L ++ I+ +FD V+V +D+ VRDNR++ L Sbjct: 611 LYTDSKRVGEEIEKSIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRINQLT 670 Query: 687 YIKNII 692 YI N+ Sbjct: 671 YIMNLF 676 >gi|218777903|ref|YP_002429221.1| glycyl-tRNA synthetase, beta subunit [Desulfatibacillum alkenivorans AK-01] gi|259511920|sp|B8FKD8|SYGB_DESAA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218759287|gb|ACL01753.1| Glycyl-tRNA synthetase, beta subunit [Desulfatibacillum alkenivorans AK-01] Length = 690 Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 204/721 (28%), Positives = 343/721 (47%), Gaps = 71/721 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLEI SEEIPA A E L+ L L+ + + + Y TP RL + L ++ Sbjct: 1 MQPLLLEIGSEEIPAGYIVPALEALAQALDAKLESARIAHSKPKVYGTPRRLAVILDEVA 60 Query: 61 PHSPEKIEERLGPRV-----GAGKKAIDG--FLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 E +GP G GK + F G+ + + + + +KG A + Sbjct: 61 EKQESVTTEMVGPPKSVAFDGEGKPKVPAVKFAEKAGV-AVEELTFQ-ETEKGVYLCAKI 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +L+ ++P I +P+PKSMRW+ ++ RP+ SIL +L + Sbjct: 119 QDEGKETLGILQEMLPEIISHIPFPKSMRWAALPG-----TFARPVFSILALL-----GD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I + + G T GH F AP I +Q+ Y+ LE+A V+ D RR + Sbjct: 169 QVIPFEWNGVTTGRQTRGHYFMAPEAIDIQTPSEYVNALEKAKVIADIPTRRKMVKEGVD 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +G + +ED++L++ + LVE+ G F+ +L +P++++ ++ +QK F + Sbjct: 229 AIAKELGGDAIEDEELVDIVANLVEFPAPVGGKFETGFLEVPDKVLITAMREHQKYFAIQ 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L CF+ V+N Q D + G+ RV+ ARL DA FW Sbjct: 289 DKDGKLMPCFVAVNNTQCKDP-QLVATGHERVLRARLSDAKFFW---------------- 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--IDADVALV 411 ++D + ++ + RLD V+F K+G+ GE+V+R+ + K +A I+ D Sbjct: 332 ----DVDKKQSMEDWVKRLDR--VLFQKKLGSVGEKVARVEEMAKFLAAAPEINGDPDKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR---GPLENV 468 +A KADL + +V EF +LQG +GK YA L + A+EEH P GPL Sbjct: 386 QKAAHFCKADLVSGLVIEFTKLQGVMGKAYASLAGMDAETASALEEHYLPAYSGGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P K V++ADK+D+L +A+ PSG++DPYALRR +G+IRI+ E + LS Sbjct: 443 PRTKTGDAVAMADKMDSLCGCFAVGLIPSGNRDPYALRRQGIGVIRILQEKGYSLSLSAI 502 Query: 529 IE----------DQNL-------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ DQNL I F DR+ L ++ D+I+A + D++ + Sbjct: 503 VDKGLTLVKDKADQNLAETRDKIISFLADRMAHMLAEQGFSKDVIQAAVAISCDDIPYLW 562 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + + + E + KR+ I+ +K E++P + EK L Sbjct: 563 KRVAAVEKLKTLPDYEALAQTFKRVANIIKQAAEKGTLSDQEVNPALFEKDCEKDLLEAF 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + ++ L + ++ FFD V+V +D +VR+NRL+LL I + Sbjct: 623 TAMEAKVSGLGVDEALLEVAKLRPA----VDAFFDDVMVMAEDMKVRENRLALLAGIAGL 678 Query: 692 I 692 Sbjct: 679 F 679 >gi|296110365|ref|YP_003620746.1| glycyl-tRNA synthetase beta chain [Leuconostoc kimchii IMSNU 11154] gi|295831896|gb|ADG39777.1| glycyl-tRNA synthetase beta chain [Leuconostoc kimchii IMSNU 11154] Length = 686 Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 214/733 (29%), Positives = 357/733 (48%), Gaps = 80/733 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + ++ + TP RL L ++ Sbjct: 1 MSTFLLEIGLEEMPAHLVTSSEAQLIERTKAFLAEHRLSVGEIKPFSTPRRLAFQLVDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G T D + ++G V+L Sbjct: 61 LESESLSEEKRGPAINRAKDEQGGWSKAAQGFARGQG-ATPEDFE----EREGYVWL-TK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P +L I + ++ + M+W+ ++F ++RP++ ++ +L E Sbjct: 115 HTPGEAAATILAKIGDEVVSQMKFTTYMKWAN-----NSFLYVRPIRWLVALL-----DE 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 I+D + E+ G T GHRF + +++ + Y+ L+ A VL+D E R++ I Sbjct: 165 AIVDFSILEVSTGRFTRGHRFLSHEHVEISHANRYVDTLKAAYVLVDAEGRKSEIRRQLE 224 Query: 234 RLASA----VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+ + L++ ++LLEE+ +VEW F GSFD+KYL +P+ ++ +++ +Q+ Sbjct: 225 MIATQNHWLLQLDVDAAQNLLEEVNNIVEWPTAFSGSFDQKYLEVPDAVLMTSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L F+ V N A + + ++ GN +V+ ARLEDA F+ DQ Sbjct: 285 FYVTDQSGALLPNFLSVRNGNAENL-SNVIAGNEKVLVARLEDAEFFYHEDQQ------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DA 406 K + MA++ L VFH KIGT E + R+ L +A + D+ Sbjct: 337 -------------KTIADSMAKVKKL--VFHEKIGTVYEHMQRVGKLAADLAASLNFDDS 381 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A + RA + K DL T +V EF ELQG +G+ YA L EN + AI+EH P Sbjct: 382 KKADLARASEIYKFDLMTGMVGEFDELQGIMGEHYAKLFGENAAVAVAIKEHYMPTSAHG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK------ 520 +V T + +++ADKLD +I F++ N P+GS DPY LRRA GI+R LENK Sbjct: 442 DVATTDVGAVLAIADKLDAIITFFSANLMPTGSNDPYGLRRAATGIVR-TLENKKWHVAL 500 Query: 521 ---IDIPLSQFIE-DQN-----LILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTI 570 +D+ ++ E QN ++ F DR++ DR IR D++ A + +++ I Sbjct: 501 KPVLDVFVTNTGEVTQNADLTAVLAFIFDRVRKIALDRGIRQDIVSAGTALVGSTDVVYI 560 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL-EAEKRLYA 629 D + L + + + S R+ + LA+ ++IS ++ + L +AE +LYA Sbjct: 561 ADRTQVLAKHADDVNFREVIESLTRVSR-LAV-----KQISHDLVDENLFENDAESKLYA 614 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 E + +Q L ++ PI +FD+ +VNVD++ +++NR + L I Sbjct: 615 ASKAIDLQDVEGQGGEAVYQA---LAALQMPIANYFDETMVNVDNQTIKNNRYAQLNLIH 671 Query: 690 NIILIVINVQKIV 702 + + + ++ IV Sbjct: 672 RLAVGLGDLSNIV 684 >gi|94991012|ref|YP_599112.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10270] gi|229558579|sp|Q1JFJ1|SYGB_STRPD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94544520|gb|ABF34568.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10270] Length = 679 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 206/706 (29%), Positives = 349/706 (49%), Gaps = 94/706 (13%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIED 122 G KA GF+R GL T + I+ KG+ Y+ V + KP + + Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAK---E 128 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD + Sbjct: 129 VLLGVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLD 177 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G ++ GHRF + S D Y DL V++D + R+ I+ L G++ Sbjct: 178 IHSGCVSRGHRFLGTE-TTITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQ 236 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D++LL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L Sbjct: 237 VDIDENLLNEVLNLVEFPTAFMGSFEAKYLDIPEEVLVTSMKNHQRYFVVRDQAGHLMPN 296 Query: 303 FILV--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNL 359 F+ V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 297 FVSVRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL------------ 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIV 416 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA Sbjct: 342 ---------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQ 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 + K DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ Sbjct: 391 IYKFDLLTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAV 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 ++LADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 451 LALADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLS 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 N I D++ +DIR EAIL + + +++ Sbjct: 511 FDSLTYTNKADVMNFIRARVDKMMGKAAPKDIR----EAILAS---STFVVPEMLAVAEA 563 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ E + + + + + + EK + S+++ P E E L+A I Sbjct: 564 LVKASHTENYKPAVESLSRAFNLAEKA--DASVQVDPSLFENEQENTLFAAIQGL----- 616 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ Q+ + + ++ I FFD +V +D+ +++NRL++L Sbjct: 617 -TLAGSAAQQL-EQVFALSPVINDFFDNTMVMAEDQALKNNRLAIL 660 >gi|161507648|ref|YP_001577602.1| glycyl-tRNA synthetase subunit beta [Lactobacillus helveticus DPC 4571] gi|172048290|sp|A8YVM4|SYGB_LACH4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160348637|gb|ABX27311.1| Glycyl-tRNA synthetase beta chain [Lactobacillus helveticus DPC 4571] gi|328465880|gb|EGF37063.1| glycyl-tRNA synthetase subunit beta [Lactobacillus helveticus MTCC 5463] Length = 687 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 213/736 (28%), Positives = 352/736 (47%), Gaps = 90/736 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EEIPA + ++ + L+ LKE G+ +++++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEIPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKITQDADGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + ++ K Sbjct: 121 KEGKKASDILLGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSDVIPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y L++ V+ + E R++ I+N + Sbjct: 175 ILD-----ITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQMNE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVKKNHWQIKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N D I+ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRN-GNKDYLDNIISGNEKVLVARLDDAQFFYDEDR------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 335 -------KYPLSHFVDRLK--NVSFHDKIGSMAEKIQRVRMIGDYLAKRWDLPENVVTDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P GPL Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSVADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 I-------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + +Q + F DR+K YL ++D+++A+L + Sbjct: 503 LPEIINMLGGVTPAKLPKGDSEQEIADFIRDRVKQYLQKNKFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL +K +++ + +E LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRINNIL---KKAKFNGKVDVDESLFVDNSETELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSIC--EP-IEIFFDQVLVNVDDREVRDNRLSLLQ 686 + + + + DL +P I+ +F+ ++ D V++NRL+ L Sbjct: 620 RVQNL----------QNIESLADLYQGFVHLQPVIDQYFEANMIMDKDENVKNNRLAQLY 669 Query: 687 YIKNIILIVINVQKIV 702 + + + ++ K+V Sbjct: 670 AVSELADRLGDLSKLV 685 >gi|256823752|ref|YP_003147715.1| glycyl-tRNA synthetase subunit beta [Kangiella koreensis DSM 16069] gi|256797291|gb|ACV27947.1| glycyl-tRNA synthetase, beta subunit [Kangiella koreensis DSM 16069] Length = 690 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 199/724 (27%), Positives = 351/724 (48%), Gaps = 71/724 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L E+ +EE+P + ++ L L+ + ++ Y P RL L ++ L+ Sbjct: 5 DLLFELGTEELPPKALKTLSDALRDNFAANLQSNDFTFDSIENYAAPRRLALTIRNLADS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K ERLGP V G+ K A GF +S G++ +I+ D KG+ + + Sbjct: 65 QPDKNVERLGPAVAGAFNDDGSAKPAAVGFAKSCGVEVDQLDRIETD--KGERLGYTIAQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++++ ++ A++K+P PK MRW +IRP+ + + +++ Sbjct: 123 KGQPLSELIEDMLNSALKKLPIPKPMRWGDRSE-----QFIRPVHWAVLLF-----GDQV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + + N + GHRF +P + S D Y+ L A V D E R+ I Sbjct: 173 LNATVLGVKTSNQSRGHRFMSPDWVTFNSADDYLSKLLTAKVNADYEQRKEQIRGQVKAE 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G D+ LL+E+ LVEW G FD ++L +P E + ++ +QK F + Sbjct: 233 ADKLGGVAQIDESLLDEVASLVEWPVALTGKFDTEFLAVPAECLISSMAEHQKYFHVFDK 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI VSNI+ S+ ++++GN +V+ RL DA+ F++ D K+ +L Sbjct: 293 DGKLMPNFITVSNIE-SNRPQSVIEGNEKVIRPRLADAMFFFETD----------KKVSL 341 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + + D + VVF ++G+ ++ R+ L K IA I A +RA Sbjct: 342 ESHQD------------HLQKVVFQKQLGSILDKSIRVAHLAKYIAPKIGAIPEDAERAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF LQG +G YA EN + A+ E P+ + + N + Sbjct: 390 LLSKCDLATNMVGEFDNLQGIMGTYYARHDGENENVAIAMTEQYLPKFSGDELAKNSVGQ 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-- 533 +++AD++D+L+ + + + P GSKDP+ALRRA +G++R I+EN++++ +++ + N Sbjct: 450 CLAIADRVDSLVGIFGVGQGPKGSKDPFALRRAAIGLLRTIVENRLELDINELLSKANQL 509 Query: 534 -----------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 L+ F +RL+ D+ + + I A++ L IK Sbjct: 510 ISERIDKANFYSHKQEALLDFLFERLRALYLDQGVSSNTISAVMALRPTQPLDFDARIKA 569 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + E + KR+ ILA K + E+ I L E+ L I+D Sbjct: 570 VQFFQTLPEAESLSAANKRVKNILA---KADIEVPDAIDSGLLQEAEEQALAKTITDAEA 626 Query: 637 HIQ--ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + S K H L S+ + ++ FFD+V+VN DD V+ NRL++L+ ++++ Sbjct: 627 KLSAMNSYQDKLQH-----LASLRDDVDAFFDKVMVNADDAAVKANRLAMLKKLQDLFGS 681 Query: 695 VINV 698 V ++ Sbjct: 682 VADI 685 >gi|94992904|ref|YP_601003.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS2096] gi|94546412|gb|ABF36459.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS2096] Length = 650 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 201/688 (29%), Positives = 343/688 (49%), Gaps = 94/688 (13%) Query: 32 LLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKAIDG 84 L E + +++++ + TP RL + + GL+ + E+ GP G KA G Sbjct: 4 FLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGPAKKIALDADGNFSKAAQG 63 Query: 85 FLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIEDVLKTIVPVAIQKVPWPKS 140 F+R GL T + I+ KG+ Y+ V + KP + +VL + V + + +P S Sbjct: 64 FVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAK---EVLLGVTEV-LSAMTFPVS 116 Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 M W+ ++F +IRP+ ++ +L ++ ++LD +I G ++ GHRF Sbjct: 117 MHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHSGRVSRGHRFLGTETT 166 Query: 201 KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWV 260 + S D Y DL V++D + R+ I+ L G+++ D+DLL E++ LVE+ Sbjct: 167 -ITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDIDEDLLNEVLNLVEFP 225 Query: 261 QVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV--SNIQASDGGAAI 318 FMG+F+ KYL +PEE++ ++K +Q+ FV R + G L F+ V N QA + + Sbjct: 226 TAFMGNFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVSVRNGNDQAIEN---V 282 Query: 319 VQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 ++GN +V+ ARLED FW+ DQ + +L +A+L +V Sbjct: 283 IKGNEKVLVARLEDGEFFWREDQKLQIADL---------------------VAKL--TNV 319 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLCTEIVREFPELQ 434 FH KIG+ E + R RV+ +A+ L +V VDRA + K DL T +V EF ELQ Sbjct: 320 TFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLLTGMVGEFDELQ 379 Query: 435 GKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINE 494 G +G++YA+L E+ + AI EH P +P K+ + ++LADKLDTL++F+++ Sbjct: 380 GIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGVVLALADKLDTLLSFFSVGL 439 Query: 495 KPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-----------------QNLILF 537 PSGS DPYALRRAT GI+RI+ IP+ + ++ N I Sbjct: 440 IPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTYTNKADVMNFIRA 499 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 D++ +DIR EAIL + + +++ ++ E + + + + Sbjct: 500 RVDKMMGKAAPKDIR----EAILAS---STFVVPEMLAVAEALVKASHTENYKPAVESLS 552 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 + + EK + S+++ P E E L+A I ++ Q+ + + ++ Sbjct: 553 RAFNLAEKA--DASVQVDPSLFENEQENTLFAAIQGL------TLAGSAAQQL-EQVFAL 603 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLL 685 I FFD +V +D+ +++NR+++L Sbjct: 604 SPVINDFFDNTMVMAEDQALKNNRVAIL 631 >gi|307709292|ref|ZP_07645750.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK564] gi|307619875|gb|EFN98993.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK564] Length = 678 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 206/698 (29%), Positives = 347/698 (49%), Gaps = 73/698 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKE-TKIQSALSYEEDLRRQFVIADPREREQMIVDQIKEIEAKHGVSIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLDVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 +V FH KIG+ E R +I +L + A L + + RA + K DL Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF----F 538 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F + Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDTFGWHIAMDELIDSLYALKFDSLTY 516 Query: 539 HDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 ++ ++ ++ R D+ EA+L N + D+++ + ++K E F Sbjct: 517 ENKSEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEASKKEDFK 573 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 S + + + + EK E + E EK L + S K+ Sbjct: 574 PSVESLSRAFNLAEKA--EGVATVDSALFENEEEKTLAEAVESLVLSGTASQQLKQ---- 627 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L ++ I+ FF+ +V ++ VR NRL++L ++ Sbjct: 628 ---LFALSPVIDAFFENTMVMAENEAVRQNRLAILSHL 662 >gi|313623739|gb|EFR93881.1| glycyl-tRNA synthetase, beta subunit [Listeria innocua FSL J1-023] Length = 688 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 207/722 (28%), Positives = 350/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEMAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q ++ + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDDEGNWSKAALGFAKS---QKVAPEDLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTVLLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLGKTATIKQPSD-YPHALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A + + D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ A E F + + + +++ I K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNK---HADAEWFRPTIEALTRVVKI--SKKYEDGVEVDPNLFENEYEQELFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYAGLTIVDRLKAFADLRTT----IDGYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|197286684|ref|YP_002152556.1| glycyl-tRNA synthetase subunit beta [Proteus mirabilis HI4320] gi|238693195|sp|B4EZ95|SYGB_PROMH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|194684171|emb|CAR45626.1| glycyl-tRNA synthetase beta subunit [Proteus mirabilis HI4320] Length = 690 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 201/725 (27%), Positives = 344/725 (47%), Gaps = 74/725 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + ++ + P RL + + ++ Sbjct: 6 FLVEIGTEELPPKALRSLAESFATHFTAELDNANITHGDVSWFAAPRRLAIKVANMAKSQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++I E+ GP + G KA +G+ R G+ ++ D + Y A ++ Sbjct: 66 ADRIVEKRGPAIAQAFDAEGKPTKAAEGWARGNGITVDQAERLSTDKGEWLFYRAEVKG- 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L + +I Sbjct: 125 -EAVNQLLAGMVSNALAKLPIPKLMRWGDKET-----HFVRPVHTVTLLL-----GDTLI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 D ++ + I GHRF + + D Y L E V+ D E R++ IL+DA Sbjct: 174 DGEILGVQSARIIRGHRFMGEAEFTIDNADQYPEILYERGKVIADYENRKSIILHDARLA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G L+EE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 234 AEKLGGVADLSDSLVEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 +G L FI VSNI++SD I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 QGALLPHFIFVSNIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F +G+ ++ RI+ L IA+ + ADV Sbjct: 352 --------------------------VLFQKNLGSLRDKTDRIQALAGFIAEKMGADVNK 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E+ A++E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALKEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++A+K+DTL + I + P G KDP+ALRRA LG++RII+E + + + + + Sbjct: 446 NPVASAVAIAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEQDLPLDIEELTQ 505 Query: 531 -----------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +QN++ F R + + + D I+A+L +K Sbjct: 506 EAARLYGDKLTNQNVVSDVVEFMLGRFRAWYQELGYSIDTIQAVLARRPTQPADFNARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA--EKRLYAVISD 633 + F + + + KR+ ILA K+ ++ L +L+A E +L A +S Sbjct: 566 AVTYFRTLEEAAALAEANKRVSNILA----KSADVKLNDKVLASVLKAPEEVQLAANLSV 621 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + ++Y + L S+ + + FFD+V+V D E+R NRL++L ++ + L Sbjct: 622 LQDKLAPLFAERKYQEALVELASLRDVVNNFFDKVMVMDKDEEIRVNRLTMLHELRELFL 681 Query: 694 IVINV 698 V ++ Sbjct: 682 KVADI 686 >gi|317485411|ref|ZP_07944290.1| glycyl-tRNA synthetase beta subunit [Bilophila wadsworthia 3_1_6] gi|316923370|gb|EFV44577.1| glycyl-tRNA synthetase beta subunit [Bilophila wadsworthia 3_1_6] Length = 695 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 201/719 (27%), Positives = 342/719 (47%), Gaps = 70/719 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+P+R ++L+ LKE G + + TP R + ++GL Sbjct: 1 MSTFVLEIGTEELPSRFLSNVEKELADRFTAGLKEAGYTFSLLDTCATPRRSVVIVEGLE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E +GP G KA GF ++ G+ + + + + KG+ YL+ + Sbjct: 61 DTQPVREELVMGPPARIAFDAEGNPTKAAQGFAKTLGIDVSALGRTQTE--KGE-YLSGM 117 Query: 114 RKPKRLIE-DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K + DVL + P I +P+ K MRW F++ RP++ +L +L Sbjct: 118 KKTGGVPTLDVLAGLCPAIIAALPFAKRMRWGDGE-----FAFARPIRWVLALL-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 + ++ ++ ++ G +T GHR P P +++ Y+ + +E V L RR I+++ Sbjct: 168 DVVVPFEVGKVASGRVTQGHRVLGPGPFTIKTAGDYVPTIVKEGAVQLKAAERRAYIVSE 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +R+A AV +++ LL+E+ GLVE +G FD +L LP E++ +++ +QK F Sbjct: 228 GNRIAEAVNGKIIWIDGLLDEVQGLVECPVPLLGDFDPSFLELPREVLLTSMQEHQKSFG 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L F+ V N+ D + + +G RV+ ARLED FWK Sbjct: 288 VEDASGNLMPHFLTVLNLHPKDL-SLVKKGWERVLRARLEDGRFFWK------------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 DL D+ + LD V F A +G+ GE+ RI L + +A+ + D Sbjct: 334 -------TDLEATFDEWLEALDA--VTFLAPLGSMGEKTRRISALCRWLAEKVQQDPEQA 384 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL + +V EF LQG +G YA + E + A+ E P GP VP Sbjct: 385 ARAGRLSKADLVSAMVGEFDTLQGIMGGIYARKKGETEAVAAALAEQYLPSGPDSPVPAT 444 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 ++ +S+ADK+DTL+ + + P+G+ DPYALRR LGI RI+LE + + E+ Sbjct: 445 ELGSILSIADKVDTLVGCFGLGMIPTGAADPYALRRCALGITRIMLERGYRFDVKELFEE 504 Query: 532 QNLIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + FF R+K Y + L+EA+ + DN+ L Sbjct: 505 AQRLYGDRKWKLAPAEAIAKLNDFFIARVKNYFLTQGKETLLVEAVTAVDPDNVWA---L 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY---LLLE-AEKRLYA 629 + L S ++ + F +A+ ++ I K+ E +++ + LL E AE L Sbjct: 562 GRRLGALESMSRQDDFPQAAQTFKRVANIIRKQGHEAGVDLQGTWKRELLQEPAEMALAE 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + + + + + +L ++ ++ FD+V+V +D +R NRL++L+ + Sbjct: 622 ALEKMFAAFEAAWANDDFEALFSMLAALRPAVDELFDKVMVMCEDPALRANRLNMLKAL 680 >gi|189485253|ref|YP_001956194.1| glysiyl-tRNA synthetase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287212|dbj|BAG13733.1| glysiyl-tRNA synthetase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 704 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 203/718 (28%), Positives = 347/718 (48%), Gaps = 64/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI +EEIP+ A + + + G+ + ++ Y TP RL L ++ L S Sbjct: 10 LLEIGAEEIPSSYIEPALKQIEDYALKAFNTSGLKHGVLKTYATPRRLVLIVENLEEKSD 69 Query: 65 EKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIK-----KDPKKGDVYLAVLRKPKRL 119 +K EE LGP + A K A + R+ + + I K +KGD V + Sbjct: 70 DKTEEVLGPSLNAAKDAHGKYTRAAVGFALKNGVIPEKLAVKTTEKGDYLFFVKKIKGEK 129 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 E +L I P I+ + +PK M W S F + RP+++I+ + +K+I Sbjct: 130 TEKLLVAIFPEIIKNISFPKIMIWEE-----SGFKFARPVRNIVALY-----GKKVIKFK 179 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + ++ N T G + IK+ + Y+ ++ V++D RR I A + Sbjct: 180 IADVNSSNWTVGLHTYDNSRIKIDLPEKYLLAMKNKSVIVDQNERREEIKRSIKYAAENI 239 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G ++ D++L++++ LVE+ + +F++KYL LP+E++ + ++ +QK F G Sbjct: 240 G-SVIPDEELVDKVNYLVEYPSAVLCAFNRKYLDLPQEILTVCMRKSQKSFAINDENGKF 298 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FI V N S +G +VVAARL DA F+ D Sbjct: 299 SNYFISVKN-GVSKYQETAKEGYEKVVAARLADAEFFYSND------------------- 338 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDRAIVL 417 L K L + +L +VFH +IGT E++ RI+ + + D D + ++RA++L Sbjct: 339 -LKKGLGINIEKLK--GIVFHKEIGTVYEKIERIKQIATLFNEEFDMRIDGSALERAVML 395 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V E+PELQG +G+ YA+ EN ++E+H P +P + ++ + Sbjct: 396 SKVDLTSEMVFEYPELQGVMGRIYALKSGENADVASSVEQHYWPLVTSGKLPLHPMASLL 455 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN--KIDIP-----LSQFIE 530 SLADK+DTL F++I +PSGS DPY ++RA G +++ + K D+ + +F+ Sbjct: 456 SLADKIDTLTAFFSIGLEPSGSADPYGVKRAGTGFVKVAMNELPKCDLTGVVGRVFEFLP 515 Query: 531 D------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + + LI FF R++ D ++A++ N L + ++ Sbjct: 516 ENVKNNPKSKDACERLIKFFWQRIENIFESEGYNSDEVKAVINAVGINKLKYIGSLRTKL 575 Query: 579 EFFSSAKGE---KFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 E +A E F+++ KRI I++ +K+N IS ++ L AEK LY Sbjct: 576 EALRNADREGDFSFVVAIFKRINNIISQAKKQNIGISGVVNEDLLAENAEKALYTAAKKA 635 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I+ + Y ++ + I I+ FF++V+V +D ++ NR+SLL YIKN+ Sbjct: 636 KAEIENCVSANEYGRVFGKVSEIKPAIDSFFEKVMVMAEDETIKLNRVSLLSYIKNMF 693 >gi|24371614|ref|NP_715656.1| glycyl-tRNA synthetase subunit beta [Shewanella oneidensis MR-1] gi|81845949|sp|Q8EKS6|SYGB_SHEON RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24345367|gb|AAN53101.1|AE015453_3 glycyl-tRNA synthetase, beta subunit [Shewanella oneidensis MR-1] Length = 688 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 209/695 (30%), Positives = 331/695 (47%), Gaps = 62/695 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL L + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLALNITELAIA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D + VY A + Sbjct: 65 QADKIVEKRGPAVSSAFDAGGKPTKAAEGWARGNGITVDQAERLVTDKGEWLVYNAKVEG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 125 VE--TKSLVAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNIRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDALLEEVTSLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 292 DAGKLLPNFIFVANIESKDP-AQIISGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 333 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----- 529 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 530 ----------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGANLSNANASEEVLEFLMARFRAWYQDKGINVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + KR+ ILA K E+ ++ L AE+ L A +++ + Sbjct: 569 FRGLEASSALAAANKRVSNILA---KVEGELPSSVNVALLSEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 + Y Q LL S+ E ++ FF+ V+V DD Sbjct: 626 PLFANADYQQALTLLASLRESVDQFFEDVMVMADD 660 >gi|260495294|ref|ZP_05815421.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_33] gi|260197072|gb|EEW94592.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_33] Length = 686 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 208/726 (28%), Positives = 359/726 (49%), Gaps = 87/726 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A DL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALADLKTNFERKLKNNRIKFDGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ +K D KG+ Y+A R Sbjct: 62 QEDLDELSIGPSRERAYKNGALTKAGEGFLKAHRIEEEQIEIVKND--KGE-YIAFKRFS 118 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E +L I+ + + +PKSMRWS + + RP++ L + +K+ Sbjct: 119 KGKPTETILPEILKALVLEETFPKSMRWSDKN-----IRFARPIEWFLALY-----GDKV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ I N + GHRF +V S++ Y++ + E V++D RR I + L Sbjct: 169 VDFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINNL 227 Query: 236 ASAVGLELVEDKD------LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 L+ED+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ Sbjct: 228 -------LLEDEKADVDEALLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRY 280 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 281 FPILSKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED--------- 329 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L PLD + +L VVF +GT ++V R + + + + + + Sbjct: 330 -----------LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYM 376 Query: 410 LVD--RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR Sbjct: 377 KEDILRTVKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQG 436 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L Sbjct: 437 DLLPSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISL 496 Query: 526 SQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 ++ + +++ F R+ D R D+I A+L + DN Sbjct: 497 KDLVKVSLDTLEADKVLKADRAKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADN 556 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + T +++++ + E S K + L + KR+ I+ K N++I+ I + + EK Sbjct: 557 ITTALEIVRVITEKLSKDKMQALLQAVKRVANIM----KGNKDIT--IKEKLFKTDIEKT 610 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY G I++S+ K Y + L ++ I+ +FD V+V +D+ VRDNR++ L Sbjct: 611 LYTDSKKVGEEIEKSIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRINQLT 670 Query: 687 YIKNII 692 YI N+ Sbjct: 671 YIMNLF 676 >gi|30249172|ref|NP_841242.1| glycyl-tRNA synthetase, beta subunit [Nitrosomonas europaea ATCC 19718] gi|81838735|sp|Q82VB0|SYGB_NITEU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|30180491|emb|CAD85097.1| Glycyl-tRNA synthetase, beta subunit [Nitrosomonas europaea ATCC 19718] Length = 715 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 203/703 (28%), Positives = 339/703 (48%), Gaps = 84/703 (11%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEE-RLGPRV------GAGKKAIDGFLRSTGLQTISDCQ 98 + +P RL ++L + +P+++ +L P G A+ L + G++ + Sbjct: 50 FASPRRLAVHLTAIPAQAPDQVVALKLMPITVGLDAQGQPTPALHKKLAALGMENVDASA 109 Query: 99 IKK-DPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPIS 151 +K+ K ++ L+ L+ + AI+++P K M W H Sbjct: 110 LKRVQESKAEMLFLEQNVTGILLAAGLQKAMEDAIRQLPVSKVMTYQLDDGWENVH---- 165 Query: 152 AFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIR 210 ++RP+ ++ + +KII + + GN T GHRF + + D Y Sbjct: 166 ---FVRPVHGLIAL-----HGQKIIPVSAFGLTAGNTTRGHRFEVKQTELIIDHADRYAS 217 Query: 211 DLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDK 269 LE E V+ + RR+ I ASAV L + D+ LL+E+ LVE+ + MG+F Sbjct: 218 LLETEGAVIPGFDRRRSWIREGLEAAASAVQLRCISDEVLLDEVTALVEYPNILMGAFPT 277 Query: 270 KYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAAR 329 +L +P+E + T+K NQK F +G L N F++V+NI +D G I+ GN RV+ +R Sbjct: 278 DFLEVPQECLISTMKINQKYFPLLDTDGKLTNQFLIVANITPADPGQ-IISGNERVIRSR 336 Query: 330 LEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGER 389 L DA F F+ D + L R+ LD V++H ++G+QGER Sbjct: 337 LADAKFF--------------------FDHDRKRTLASRLPDLD--KVIYHHQLGSQGER 374 Query: 390 VSRIRVLGKKIAQLIDAD--VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE 447 ++ L + I +L+ D D+A +L+KADL T++V EFPELQG +G+ YA + Sbjct: 375 TRYVQTLARIIGRLLGDDNLAGQADQAAMLAKADLLTDMVGEFPELQGIMGRYYARFEGM 434 Query: 448 NISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRR 507 + + AIE+H KPR + +P + I V+LADKL+TLI+ ++I + P+G KDPYALRR Sbjct: 435 DETIAFAIEDHYKPRFAGDVLPRSMAGICVALADKLETLISLFSIGQLPTGDKDPYALRR 494 Query: 508 ATLGIIRIILENKIDIPLSQFIEDQNLIL----------------------------FFH 539 LG+IRI++E + I L I +L FF+ Sbjct: 495 HALGVIRILIEKNLPIGLDVLISRAADVLQDEMIGKQDSGPGHARPVTPQLVGQLQDFFY 554 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRL L D+ +EA+L L I + + F + + + KR+ I Sbjct: 555 DRLAASLRDQGYTAQEVEAVLNLRPSLLCEIPRRLAAVRAFAALPEAASLAAANKRVGNI 614 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 L +K + ++ I L AE LY +S+ + +++ + Y +L ++ Sbjct: 615 L---KKSECDATVAIDEACLQASAEITLYRALSEIESDARQAFQNGDYVTALQILAALKA 671 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 P++ FFDQV+VN ++ +R NRL+LL ++ + V ++ ++ Sbjct: 672 PVDAFFDQVMVNDENEALRRNRLALLMALQATMNRVADISRLA 714 >gi|331266701|ref|YP_004326331.1| glycyl-tRNA synthetase beta subunit [Streptococcus oralis Uo5] gi|326683373|emb|CBZ00991.1| glycyl-tRNA synthetase beta subunit [Streptococcus oralis Uo5] Length = 678 Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 209/699 (29%), Positives = 349/699 (49%), Gaps = 81/699 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKTAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E+++ Sbjct: 75 AKKIALDGDGNFTKAAQGFVRGKGL-TVEDIKFRE--IKGEEYVYVTKEEVGQPVENIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL V++DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLG-QETKIQSALSYEEDLRAQFVIVDPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + DL + L Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLVIS-------------DLVEKL 345 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 + V FH KIG+ E R +I +L +K +D V L RA + K D Sbjct: 346 NH---------VTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYALLAGEIPAVAAAIREHYMPTAAEGELPESKVGAILAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + ++K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLASSN---FVVADMLEVASALVEASKKEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF---GTHIQESMDHKR 646 S + + + + EK E S + E EK L + GT Q+ Sbjct: 573 KSSVESLSRAFNLAEKA--EGSDAVDSALFENEEEKALAEAVESLVLSGTASQQL----- 625 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 626 -----EQLFALSPVIDAFFENTMVMAEDQTVRQNRLAIL 659 >gi|71904089|ref|YP_280892.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS6180] gi|123747755|sp|Q48RX3|SYGB_STRPM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71803184|gb|AAX72537.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS6180] Length = 679 Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 205/706 (29%), Positives = 349/706 (49%), Gaps = 94/706 (13%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIED 122 G KA GF+R GL T + I+ KG+ Y+ V + KP + + Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAK---E 128 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD + Sbjct: 129 VLLGVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLD 177 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G ++ GHRF + S D Y DL V++D + R+ I+ L G++ Sbjct: 178 IHSGRVSRGHRFLGTE-TTITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQ 236 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D+DLL E++ LVE+ FMG+F+ KYL +PEE++ ++K +Q+ FV R + G L Sbjct: 237 VDIDEDLLNEVLNLVEFPTAFMGNFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPN 296 Query: 303 FILV--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNL 359 F+ V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 297 FVSVRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL------------ 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIV 416 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA Sbjct: 342 ---------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQ 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 + K DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ Sbjct: 391 IYKFDLLTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAV 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 ++LADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 451 LALADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLS 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 N I D++ +DIR EAIL + + +++ Sbjct: 511 FDSLTYTNKADVMNFIRARVDKMMGKAAPKDIR----EAILAS---STFVVPEMLAVAEA 563 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ E + + + + + + EK + S+++ P E E L+A I Sbjct: 564 LVKASHTENYKPAVESLSRAFNLAEKAD--ASVQVDPSLFENEQENTLFAAIQGL----- 616 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ Q+ + + ++ I FFD +V +D+ +++NR+++L Sbjct: 617 -TLAGSAAQQL-EQVFALSPVINDFFDNTMVMAEDQALKNNRVAIL 660 >gi|56807942|ref|ZP_00365761.1| COG0751: Glycyl-tRNA synthetase, beta subunit [Streptococcus pyogenes M49 591] Length = 679 Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 204/706 (28%), Positives = 346/706 (49%), Gaps = 94/706 (13%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAEQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIED 122 G KA GF+R GL T + I+ KG Y+ V + KP + + Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGVEYVYVTKHEAGKPAK---E 128 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD + Sbjct: 129 VLLGVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLD 177 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G ++ GHRF + S D Y DL V+ D + R+ I+ L G++ Sbjct: 178 IHSGRVSRGHRFLGTE-TTITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQ 236 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L Sbjct: 237 VDIDEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPN 296 Query: 303 FILV--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNL 359 F+ V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 297 FVSVRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL------------ 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIV 416 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA Sbjct: 342 ---------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQ 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 + K DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ Sbjct: 391 IYKFDLLTGMVGEFDELQGIMGEKYALLAGEDAAVARAIREHYLPDAAGGALPETKVGAV 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 ++LADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 451 LALADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLS 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 N I D++ +DIR ++E+ + + +++ Sbjct: 511 FDSLTYANKADVMNFIRARVDKMMGKAAPKDIREAVLES-------STFVVPEMLAAAEA 563 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ E + + + + + + EK + S+++ P E E L A I Sbjct: 564 LVKASHTENYKPAVESLSRAFNLAEKAD--ASVQVDPSLFENEQENTLSAAIQGL----- 616 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ Q+ + + ++ I FFD +V +D+ +++NRL++L Sbjct: 617 -TLAGSAAQQL-EQVFALSPVINDFFDNTMVMAEDQALKNNRLAIL 660 >gi|15675548|ref|NP_269722.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes M1 GAS] gi|71911197|ref|YP_282747.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS5005] gi|25009338|sp|Q99YI4|SYGB_STRP1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|13622750|gb|AAK34443.1| putative glycyl-tRNA synthetase (beta subunit) [Streptococcus pyogenes M1 GAS] gi|71853979|gb|AAZ52002.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS5005] Length = 679 Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 204/703 (29%), Positives = 346/703 (49%), Gaps = 88/703 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 GVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTE-TTITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 V--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNLDLS 362 V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 300 VRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL--------------- 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA + K Sbjct: 342 ------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++L Sbjct: 394 FDLLTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 A KLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 454 AAKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDS 513 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 N I D++ +DIR EAIL + + +++ Sbjct: 514 LTYANKADVMNFIRARVDKMMGKAAPKDIR----EAILAS---STFVVPEMLAAAEALVK 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 ++ E + + + + + + EK + S+++ P E E L+A I ++ Sbjct: 567 ASHTENYKPAVESLSRAFNLAEKAD--ASVQVDPSLFENEQENTLFAAIQGL------TL 618 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 Q+ + + ++ I FFD +V D+ +++NRL++L Sbjct: 619 AGSAAQQL-EQVFALSPVINDFFDNTMVMAGDQALKNNRLAIL 660 >gi|241895548|ref|ZP_04782844.1| glycine--tRNA ligase [Weissella paramesenteroides ATCC 33313] gi|241871126|gb|EER74877.1| glycine--tRNA ligase [Weissella paramesenteroides ATCC 33313] Length = 700 Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 214/731 (29%), Positives = 351/731 (48%), Gaps = 94/731 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI EE+PA + A L +KE + Y +++ + TP RL + + ++ Sbjct: 7 MANFLLEIGLEEMPAHLVTPAINQLVERAATFMKENRLQYGDIKPFSTPRRLAILISEVA 66 Query: 61 PHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + +E GP + G KA GF R G+ T D K+ +Y+ Sbjct: 67 DKADDLTQEVKGPAKKAAFDKEGNYSKAAQGFARGQGV-TTDDITFKEFKGNEYIYVTKF 125 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K IE VL V I + + +M+W+ H+ F ++RP++ I+ +L + Sbjct: 126 EAGKPAIE-VLSGFKEV-IMSMTFTTTMKWAR-HT----FEYVRPIRWIVALL-----DD 173 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ ++ ++ G T GHRF I + Y+ DLE+ V D R+ I++ Sbjct: 174 MVVPFNVVDVDSGRETRGHRFLG-QSINIAQASDYVNDLEKVYVQADASVRKANIVSQID 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +LA+ + +D DLLEE+ +VE+ F+G FD +YL LPEE++ +++ +Q+ F Sbjct: 233 KLAAENNWHVEKDADLLEEVNNIVEYPTAFVGRFDSEYLDLPEEVLITSMREHQRFFHVI 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L F+ V N S+ ++ GN +V+ ARLEDA F+ DQ N Sbjct: 293 DDSGALLPYFVSVRNGN-SEHLDNVIAGNEKVLIARLEDAKFFYHEDQKN---------- 341 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVV-FHAKIGTQGERVSRIRVL----GKKIAQLIDADV 408 ++D D L VV FHAK+G+ R + L G++I+ D + Sbjct: 342 ----DIDFYN---------DKLQVVSFHAKLGSVANHTKRAQALAAIIGQQISLTSDQQM 388 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L RA + K DL T +V EF ELQG +G++YA+L E+ + AI EH P + Sbjct: 389 QLA-RAAEIYKFDLMTGMVGEFDELQGIMGEKYALLFGEDPAVAQAIREHYMPISADGAL 447 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK----IDIP 524 P + + ++LADKLD+L++F+A PSGS DPYALRRA G++ I+ N IDI Sbjct: 448 PESVLGKVLALADKLDSLLSFFAGGMMPSGSNDPYALRRAASGVVNILHANDWHLPIDII 507 Query: 525 LSQFIED----------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 LS+ +++ ++I F DR+ + IR+D+I A+ Sbjct: 508 LSELVDEVLADDGHFGLPEEAANNLKSVINDVITFLTDRVVKAMQTEKIRYDVINAVTTG 567 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 + L + N + + + F + + +++ + K E + ++P + Sbjct: 568 K---LTDTTQMFTSANALLAHSNDQTFREGVESLTRVMRLTSKNPTEAT--VNPALFEND 622 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI--CEP-IEIFFDQVLVNVDDREVRD 679 AEK+LY S+ + ES+ DL+ S+ +P I +FDQ +V V+D V+ Sbjct: 623 AEKQLY---SETSLLVNESL------TTDDLVSSLLGLQPAIAAYFDQTMVMVEDEAVKQ 673 Query: 680 NRLSLLQYIKN 690 NRL+ LQ + N Sbjct: 674 NRLATLQIVSN 684 >gi|307702019|ref|ZP_07639027.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis NCTC 12261] gi|307616664|gb|EFN95853.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis NCTC 12261] Length = 678 Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 206/700 (29%), Positives = 351/700 (50%), Gaps = 77/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQADLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ + F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAN-----NTFEYIRPVHTLTVLL-----DEEEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 DRVSRGHRFLG-QETKIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIETEHGVHIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A D +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-DHLENVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 +V FH KIG+ E R +I +L + A L + + RA + K DL Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF----F 538 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F + Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALTFDSLTY 516 Query: 539 HDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 ++ ++ ++ R D+ EA+L N + D+++ + ++K E F Sbjct: 517 ENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEASKEEDFK 573 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYH 648 S + + + + +K ++++ + L E EK L + S K+ Sbjct: 574 PSVESLSRAFNLADKAEGVVAVDSA----LFENDQEKALAEAVESLVLSGTASQQLKQ-- 627 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L ++ I+ FF+ +V +D+ VR NRL++L ++ Sbjct: 628 -----LFALSPVIDSFFENTMVMAEDQAVRQNRLAILSHL 662 >gi|303228981|ref|ZP_07315791.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-134-V-Col7a] gi|302516395|gb|EFL58327.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-134-V-Col7a] Length = 683 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 219/738 (29%), Positives = 347/738 (47%), Gaps = 98/738 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 4 DLLFEIGAEEIPAGFMPNILGQLKTLAETKLNDAHLPFESIATYGTPRRLALIVKGLGDT 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQT----ISDCQIKKDPKKGDVYLA 111 S E E GP G KA GF R GL + D I + K V Sbjct: 64 SAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVADLVVEDGYIYAETKTAGV--- 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + D++ ++P I + +PKS+ W + ++RP++ ++ +L Sbjct: 121 ----PAK---DIVTDMLPQLITGLNFPKSLHWGNLDA-----KFVRPVRWLVALL----- 163 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 164 DEEVIPVEFATVKSGNVTRGHRFLGADEISIKNAASYVDTLKENFVMVDQDARRELISKQ 223 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 224 LHDIAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFP 283 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L F+ V N SD +VQ GN RV+ ARL+DA F Sbjct: 284 LVDQDGKLLPMFLTVRN--GSDHSIEVVQAGNERVLRARLDDAKFF-------------- 327 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI----DA 406 FN D KPL R L +VF +G ++ R+ LG+ ++ DA Sbjct: 328 ------FNEDRKKPLIDRQDGL--TKIVFQEGLGNLADKTERLLTLGRVFSEECELHEDA 379 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V L +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + Sbjct: 380 RVVL-ERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRYAGD 438 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 439 VLPQTEAGKVLSIIDKIDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLR 498 Query: 527 QFI-EDQNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 I E NL+ F RLK DR++ H +I+ +L ++N L++ Sbjct: 499 PIIVESMNLLNVPADKQDELLGQVEEFITLRLKNIFLDREVPHHVIDLLL---SNNELSV 555 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY-------LLLEA 623 D A+G L A RI + + + + R +L Y L EA Sbjct: 556 AD-----------AEGLVKALLANRIDENVELVQAFTRMYNLVKDVTYTGVDESLLKEEA 604 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E+ LY + + ++ D Y + + ++ I FF+ V+V D ++ NRL Sbjct: 605 ERALYEMATKASEASIDAWDKNDYDAVVAVPATLVPAINKFFEDVMVMDKDEAIKANRLQ 664 Query: 684 LLQYIKNIILIVINVQKI 701 L++ +++ I+ ++ + Sbjct: 665 LVRLAYSVMAIIGDISAL 682 >gi|209559814|ref|YP_002286286.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes NZ131] gi|238064855|sp|B5XMM9|SYGB_STRPZ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|209541015|gb|ACI61591.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes NZ131] Length = 679 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 204/706 (28%), Positives = 346/706 (49%), Gaps = 94/706 (13%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIED 122 G KA GF+R GL T + I+ KG Y+ V + KP + + Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGVEYVYVTKHEAGKPAK---E 128 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL + V + + +P SM W+ ++F +IRP+ ++ +L ++ ++LD + Sbjct: 129 VLLGVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLL-----NDEALELDFLD 177 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G ++ GHRF + S D Y DL V+ D + R+ I+ L G++ Sbjct: 178 IHSGRVSRGHRFLGTE-TTITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQ 236 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L Sbjct: 237 VDIDEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPN 296 Query: 303 FILV--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNL 359 F+ V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 297 FVSVRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL------------ 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIV 416 +A+L +V FH KIG+ E + R RV+ +A+ L +V VDRA Sbjct: 342 ---------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQ 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 + K DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ Sbjct: 391 IYKFDLLTGMVGEFDELQGIMGEKYALLAGEDAAVARAIREHYLPDAAGGALPETKVGAV 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 ++LADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 451 LALADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLS 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 N I D++ +DIR ++E+ + + +++ Sbjct: 511 FDSLTYANKADVMNFIRARVDKMMGKAAPKDIREAVLES-------STFVVPEMLAAAEA 563 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ E + + + + + + EK + S+++ P E E L A I Sbjct: 564 LVKASHTENYKPAVESLSRAFNLAEKAD--ASVQVDPSLFENEQENTLSAAIQGL----- 616 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ++ Q+ + + ++ I FFD +V +D+ +++NRL++L Sbjct: 617 -TLAGSAAQQL-EQVFALSPVINDFFDNTMVMAEDQALKNNRLAIL 660 >gi|161611293|ref|YP_139030.2| glycyl-tRNA synthetase subunit beta [Streptococcus thermophilus LMG 18311] Length = 678 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 204/700 (29%), Positives = 349/700 (49%), Gaps = 77/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKSAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 132 GI-PEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ + + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIANSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ LK + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQK------------LK--------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + D+++ +AK + Sbjct: 517 DNQAEVIRFIKARVDKMMG--STPKDIKEAVLSGSN---FVVADMLEAAEALSEAAKTDG 571 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + + EK + ++++ S L E ++ + + S K Sbjct: 572 YKAAVESLSRAFNLAEKADTSVAVDAS----LFENDQEKALAQAAESLELTGSASDKLAQ 627 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L + I+ FFD +V DD V++NRL+LL + Sbjct: 628 -----LFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSAL 662 >gi|323524767|ref|YP_004226920.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. CCGE1001] gi|323381769|gb|ADX53860.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1001] Length = 700 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 206/686 (30%), Positives = 337/686 (49%), Gaps = 60/686 (8%) Query: 42 NMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ-- 92 + +Y TP RL + +K + +PE+ + E++ P + G + L + G Sbjct: 49 SFERYATPRRLAVTVKNVRAVAPERQVREKVLPVSVALDKDGQPTAPLAKKLAALGFPDF 108 Query: 93 TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 ++SD + +D K + + P + + L+ + + K+P PK M + S Sbjct: 109 SVSDLERAQD-GKAEAFFLRYAAPGATLAEGLQGALDETLAKLPIPKVMTYQRPDG--SN 165 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 ++RP + + E ++ + I + T GHRF + +++Q D Y+ L Sbjct: 166 VQFVRPAHRLTAL-----HGEHVVPVSALGIDADDTTLGHRFLSEGFVQIQHADSYVDTL 220 Query: 213 -EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKY 271 + V+ + R+ I H LA A G ++V + LL+E+ LVEW V+ F+ ++ Sbjct: 221 MHKGRVVPNFADRKETIRT--HLLAHADGDQVVMPEALLDEVTSLVEWPVVYSCRFEAEF 278 Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 L +P+E + LT++TNQK F G L + F++VSNI+ + G I++GN RVV RL Sbjct: 279 LQVPQECLILTMQTNQKYFALTDANGKLRSRFLIVSNIETATPGD-IIEGNERVVRPRLA 337 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F+++D+ KPL R+ L +VV+H K+G+ +RV Sbjct: 338 DAKFFFEQDKK--------------------KPLADRVPLL--ANVVYHNKLGSALQRVE 375 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R+ L IA L ADVAL RA L+KADL T++V EFPELQG +G YA E Sbjct: 376 RLESLAGAIAALTGADVALAKRAARLAKADLITDMVGEFPELQGTMGTYYARHDGEPEEV 435 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A EH +PR + +P V+LADKL+TL+ W I +P+G KDP+ALRR LG Sbjct: 436 ALACSEHYQPRFSGDALPATATGTVVALADKLETLVGIWGIGLQPTGEKDPFALRRHALG 495 Query: 512 IIRIILENKIDIPL--------SQFI-------EDQNLILFFHDRLKLYLHDRDIRHDLI 556 ++RI++E ++ + +QF Q + F DRL+ L +R I Sbjct: 496 VLRILVEKQLPVDFVELLRTAHAQFAALPNVTDSTQAIYEFSMDRLRGLLRERGHAPGEI 555 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L L IV + + EF + + + KRI IL ++ + S + P Sbjct: 556 DAVLALNPTRLDDIVARLDAVREFAALPEAASLAAANKRISNIL--KKSEGATASGGVQP 613 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 L+ AEK L+A + +Q + + Y L ++ EP++ FF+ V+VN +D Sbjct: 614 ALLVEAAEKALFAQLEQVAPRVQSQLAARDYTGALTALAALREPVDTFFNDVMVNAEDPA 673 Query: 677 VRDNRLSLLQYIKNIILIVINVQKIV 702 +R NRL+LL + + V ++ ++ Sbjct: 674 LRANRLALLGALHQQMNCVADISRLA 699 >gi|238019251|ref|ZP_04599677.1| hypothetical protein VEIDISOL_01115 [Veillonella dispar ATCC 17748] gi|237863950|gb|EEP65240.1| hypothetical protein VEIDISOL_01115 [Veillonella dispar ATCC 17748] Length = 683 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 215/733 (29%), Positives = 347/733 (47%), Gaps = 88/733 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL+ Sbjct: 4 DLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGLADT 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQT----ISDCQIKKDPKKGDVYLA 111 S E E GP G KA GF R GL + D I + K V Sbjct: 64 SAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVADLVVEDGYIYAETKTAGV--- 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 121 ----PAK---DIVSEMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWLVALL----- 163 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 164 DEEVIPVEFATVKSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQ 223 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 224 LHDIAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFP 283 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L F+ V N SD +VQ GN RV+ ARL+DA F Sbjct: 284 LVDQNGKLLPMFLTVRN--GSDHSIEVVQAGNERVLRARLDDAKFF-------------- 327 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDA 406 FN D KPL R L +VF +G ++ R+ RV G++ DA Sbjct: 328 ------FNEDRKKPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDA 379 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V L +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + Sbjct: 380 AVVL-ERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESEEVAEAIFEQYLPRFAGD 438 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 439 VLPQTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLR 498 Query: 527 QFIEDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + +L FF RLK DR++ H +I+ +L ++N L++ Sbjct: 499 PIFKASMELLNVAADKQDELLGQVEEFFTLRLKNIFLDREVPHHVIDLLL---SNNELSV 555 Query: 571 VDLIKHLNEFFSSAKGEKFLL--SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 D +N ++ E L + R++ ++ K+ E + ++ L +AEK L+ Sbjct: 556 ADAEGLVNALLANRIDENVELVQAYTRMYNLV-----KDLEYT-GVNSDLLKEDAEKALF 609 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 S + + Y + + ++ I FF+ V+V D ++ NRL L++ Sbjct: 610 EAASKASEASLAAWEANDYAAVVAVPATLVPAINKFFEDVMVMDKDEAIKSNRLQLVRLA 669 Query: 689 KNIILIVINVQKI 701 +++ I+ ++ + Sbjct: 670 YSVMAIIGDISAL 682 >gi|256617037|ref|ZP_05473883.1| glycyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256596564|gb|EEU15740.1| glycyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] Length = 694 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 217/735 (29%), Positives = 369/735 (50%), Gaps = 89/735 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D+ S+++ Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNEDKK-----STIEA 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 341 CVEKLK-----------------NVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLS 683 K LY ++D M + Y + +L P I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVNDLSEAFATRMIAENYEALVNL-----RPLIDAYFNETMVMVEDEKVKQNRLK 673 Query: 684 LLQYIKNIILIVINV 698 L I + L + ++ Sbjct: 674 QLMQIAKMALSIASL 688 >gi|55736573|gb|AAV60215.1| glycyl-tRNA synthetase beta subunit [Streptococcus thermophilus LMG 18311] Length = 714 Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 204/700 (29%), Positives = 349/700 (49%), Gaps = 77/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 51 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 110 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + ++VL Sbjct: 111 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKSAKEVLA 167 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W+ ++F +IRP+ +++ +L ++ ++LD I Sbjct: 168 GI-PEVLASLTFPVSMHWAN-----NSFEYIRPVHTLIVLL-----GDEALELDFLGIKS 216 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ + + R N I + + G+++ Sbjct: 217 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIANSKERENMIREQIKAIEAEQGVQVQI 275 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI Sbjct: 276 EEGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFIS 335 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ LK + Sbjct: 336 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQK------------LK--------I 374 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K DL Sbjct: 375 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDL 432 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 433 LTGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADK 492 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 493 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 552 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + D+++ +AK + Sbjct: 553 DNQAEVIRFIKARVDKMMG--STPKDIKEAVLSGSN---FVVADMLEAAEALSEAAKTDG 607 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + + EK + ++++ S L E ++ + + S K Sbjct: 608 YKAAVESLSRAFNLAEKADTSVAVDAS----LFENDQEKALAQAAESLELTGSASDKLAQ 663 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L + I+ FFD +V DD V++NRL+LL + Sbjct: 664 -----LFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSAL 698 >gi|315178617|gb|ADT85531.1| glycyl-tRNA synthetase, beta chain [Vibrio furnissii NCTC 11218] Length = 688 Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 207/699 (29%), Positives = 328/699 (46%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L G+ + + Y TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFTAELNNAGIAHDGVTWYATPRRLALKVANLAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L + Sbjct: 64 QPDKVVEKRGPAVSVAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K+ L IL + + Sbjct: 122 KGQDTAAVVVDMAAKALAHLPIAKPMRWGDKET-----QFIRPVKT-LTILFGD----TL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ID ++ + I GHRF + S Y L E V+ D E R+ I++ A + Sbjct: 172 IDGEILGVKSDRIIRGHRFMGEPEFTIDSAAQYPAILLERGKVIADYETRKAMIIDGAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DL+EE+ LVE+ V F++K+L +P E + T+K +QK F Sbjct: 232 AAAELGGIADLEDDLVEEVTSLVEFPVVLTAKFEEKFLKVPAEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ADKHLLPNFIFVSNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL L R+ +L+ +F K+GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDLKSKLVDRLPQLET--AIFQQKLGTIKDKTDRITELAGYIAEQIGADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR +++PTN +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDSLPTNGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 449 AAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +Q++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDRLSNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARHPTKPADFDRRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRDLDAAEALAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEAVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQQALSQLAGLREPVDAFFDNVMVMADDEALK 663 >gi|183597049|ref|ZP_02958542.1| hypothetical protein PROSTU_00285 [Providencia stuartii ATCC 25827] gi|188023709|gb|EDU61749.1| hypothetical protein PROSTU_00285 [Providencia stuartii ATCC 25827] Length = 689 Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 202/723 (27%), Positives = 337/723 (46%), Gaps = 71/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + P RL L + L+ S Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDSADIAHGEVSWFAAPRRLALKVAALADSS 65 Query: 64 PEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + A KA +G+ R G+ ++K D KG+ L + Sbjct: 66 PDREVEKRGPAISAAFGADGQPTKAAEGWARGCGISVDQAERLKTD--KGEWLLYRAQVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L +V ++ K+P PK MRW + ++RP+ ++ +L ++ ++ Sbjct: 124 GVAVSELLVDMVSRSLAKLPIPKLMRWGDKET-----HFVRPVHTVTLLLGSD-----VV 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 D ++ I G GHRF + D Y L E V+ D E R+ I DA + Sbjct: 174 DGEVLGIKSGRTIRGHRFMGESEFTIDHADQYPAILRERGKVIADYEERKAVIKADAEKA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ALALGGKADLTDSLLEEVASLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 G L FI V+NI++SD I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 AGNLMPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++GT ++ R+ L +A I ADV Sbjct: 352 --------------------------VLFQQQLGTLRDKTDRLEALSGWVAAKIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ Sbjct: 386 ATRAGLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + E Sbjct: 446 TDVSAALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + + D I+A+L + +K Sbjct: 506 EAVRLYGDKLTNKNVVNDVVEFMLGRFRSWYQELGYSIDTIQAVLARRPTSPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + E + KR+ IL+ K N +++ ++ L E +L + Sbjct: 566 AVTHFRTLEDAEALAAANKRVSNILS---KSNEKLADKVLASVLKAPQEVKLATHLVVLQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + Y L S+ E ++ FF V+V +D VR NRL+LL ++++ L V Sbjct: 623 EKLEPMFAERNYQDALVELASLREVVDAFFADVMVMDEDEAVRINRLTLLSQLRDLFLKV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|323466386|gb|ADX70073.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus helveticus H10] Length = 687 Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 213/736 (28%), Positives = 351/736 (47%), Gaps = 90/736 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EEIPA + ++ + L+ LKE G+ +++++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEIPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + ++ K Sbjct: 121 KEGKKASDILLGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSDVIPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y L++ V+ + E R++ I+N + Sbjct: 175 ILD-----ITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQMNE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVKKNHWQIKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N D I+ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRN-GNKDYLDNIISGNEKVLVARLDDAQFFYDEDR------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL + RL +V FH KIG+ E++ R+R++G + + D +V Sbjct: 335 -------KYPLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLVKRWDLPENVVTDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P GPL Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSVADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 I-------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + +Q + F DR+K YL ++DL++A+L + Sbjct: 503 LPEIINMLGGVTPAKLPKGDSEQEIADFIRDRVKQYLQKNKFKYDLVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL +K +++ + +E LYA Sbjct: 563 ILAAANVLQLHHDDEEFKPVVESLTRINNIL---KKAKFNGKVDVDESLFVDNSETELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSIC--EP-IEIFFDQVLVNVDDREVRDNRLSLLQ 686 + + + + DL +P I+ +F+ ++ D V++NRL+ L Sbjct: 620 GVQNL----------QNIESLADLYQGFVHLQPVIDQYFEANMIMDKDENVKNNRLAQLY 669 Query: 687 YIKNIILIVINVQKIV 702 + + + ++ K+V Sbjct: 670 AVSELADRLGDLSKLV 685 >gi|227355124|ref|ZP_03839535.1| glycyl-tRNA synthetase beta subunit [Proteus mirabilis ATCC 29906] gi|227164911|gb|EEI49758.1| glycyl-tRNA synthetase beta subunit [Proteus mirabilis ATCC 29906] Length = 690 Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 199/725 (27%), Positives = 343/725 (47%), Gaps = 74/725 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + ++ + P RL + + ++ Sbjct: 6 FLVEIGTEELPPKALRSLAESFATHFTAELDNANITHGDVSWFAAPRRLAIKVANMAKSQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++I E+ GP + G KA +G+ R G+ ++ D + Y A ++ Sbjct: 66 ADRIVEKRGPAIAQAFDAEGKPTKAAEGWARGNGITVDQAERLSTDKGEWLFYRAEVKG- 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L + +I Sbjct: 125 -EAVNQLLAGMVSNALAKLPIPKLMRWGDKET-----HFVRPVHTVTLLL-----GDTLI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 D ++ + I GHRF + + D Y L E V+ D E R++ IL+DA Sbjct: 174 DGEILGVQSDRIIRGHRFMGEAEFTIDNADQYPEILYERGKVIADYENRKSIILHDARLA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G L+EE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 234 AEKLGGVADLSDSLVEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 +G L FI VSNI++SD I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 QGALLPHFIFVSNIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F +G+ ++ RI+ L IA+ + ADV Sbjct: 352 --------------------------VLFQKDLGSLRDKTDRIQALAGFIAEKMGADVNK 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E+ A++E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALKEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++A+K+DTL + I + P G KDP+ALRRA LG++RII+E + + + + + Sbjct: 446 NPVASAVAIAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEQDLPLDIEELTQ 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + + D I+A+L +K Sbjct: 506 EAARLYGDKLTNKNVVSDVVEFMLGRFRAWYQELGYSIDTIQAVLARRPTQPADFNARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA--EKRLYAVISD 633 + F + + + KR+ ILA K+ ++ L +L+A E +L A +S Sbjct: 566 AVTYFRTLEEAAALAEANKRVSNILA----KSADVKLNDKVLASVLKAPEEVQLAANLSV 621 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + ++Y + L S+ + + FFD+V+V D E+R NRL++L ++ + L Sbjct: 622 LQDKLAPLFAERKYQEALVELASLRDVVNNFFDKVMVMDKDEEIRVNRLTMLHELRELFL 681 Query: 694 IVINV 698 V ++ Sbjct: 682 KVADI 686 >gi|16800563|ref|NP_470831.1| glycyl-tRNA synthetase subunit beta [Listeria innocua Clip11262] gi|25009313|sp|Q92BQ2|SYGB_LISIN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|16413968|emb|CAC96726.1| glyS [Listeria innocua Clip11262] Length = 688 Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 207/722 (28%), Positives = 349/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEMAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q ++ + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDDEGNWSKAALGFAKS---QKVAPEDLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLGKTATINQPSD-YPHALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A + + D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMERVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGVLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ A E F + + + +++ I K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNK---HADAEWFRPTIEALTRVVKI--SKKYEDGVEVDPNLFENEYEQELFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYAGLTIVDRLKAFADLRTT----IDGYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|257125160|ref|YP_003163274.1| glycyl-tRNA synthetase subunit beta [Leptotrichia buccalis C-1013-b] gi|257049099|gb|ACV38283.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia buccalis C-1013-b] Length = 678 Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 219/732 (29%), Positives = 368/732 (50%), Gaps = 91/732 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI EE+PA+ KA +DL I+ LK E + + + + TP R+ +K L+ Sbjct: 2 NFLFEIGLEELPAQYVDKAEKDLKKIIENELKAERIKFSGIESFSTPRRVTAIIKDLAEK 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + ++ +GP V G KA +GF++S G T D +I ++ K + + Sbjct: 62 QDDLDKKSVGPSVEIAYKDGQLTKAGEGFVKSQG-ATADDIKIIENEKGKYISIEKFIAG 120 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K E +L I+ AI+K+ + KSM+W+ F ++RP+K + + D E I+ Sbjct: 121 KNTRE-ILPEILKNAIKKIEFEKSMKWAD-----RTFRFVRPIKWFVTLF---DNGE-IL 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + GN T G R+ A I++ + Y + L E V++D E RR IL Sbjct: 171 PFEFEGLKGGNKTRGMRYFASQDIEINNPLDYEKILLENFVIVDGEKRREEILKSIRENG 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G + +K LL+E++ +VE+ G F K YL LPE++I +T++T+Q+ F + ++ Sbjct: 231 ENDGDTAIINKYLLDEVVNVVEYPYAIKGEFSKDYLELPEDIITITLETHQRYFPVKDKD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN--LPNLSSLKESA 354 G L+N FI++ N A + + +GN +VV RL DA F+ D N N+ LKE Sbjct: 291 GKLSNKFIVIRN--APEYSETVKKGNEKVVEPRLADAKFFFDEDLKNKFADNVEKLKE-- 346 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD-- 412 V F +GT E+V R +KIA+ + +++ L D Sbjct: 347 ----------------------VTFQKDMGTIFEKVKR----SEKIAEYLISELNLTDKK 380 Query: 413 ----RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 R + L+KADL + ++ +EF +LQG +G YA Q E+ I EH PR + Sbjct: 381 ENIIRTVDLAKADLVSNVIGEKEFTKLQGFMGSVYAEKQGEDKDVALGIFEHYLPRYQGD 440 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +PT +ADK+DT+I +++ KP+ SKDPYALRRAT GII+++L +K+ Sbjct: 441 ELPTTVEGAIAGIADKMDTIIGCFSVGLKPTSSKDPYALRRATQGIIQVVLNSKLSFNYK 500 Query: 527 QFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + IE +++ FF R+ L ++ + DLI + E++ Sbjct: 501 KLIEKAYEIFSADKKVLEKDVVKDVTEFFKQRIINVLSEK-YKKDLINYEINLESN---- 555 Query: 570 IVDLIKHLNEFFSSAKGEKF--LLS-AKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 +V+L K L+E ++ E F L++ KR+ I+ K + I+ ++ + + EK Sbjct: 556 VVELDKKLSELLKLSQTENFEILINLLKRVKNIV----KDEKNITTDVIFELFESKEEKA 611 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L DF + ESM++ + + L + + I FFD V++NVD+ ++R NR++LL+ Sbjct: 612 LL----DFANKL-ESMENNEFSNYIEELLNNADTINQFFDNVIINVDNGKLRTNRIALLK 666 Query: 687 YIKNIILIVINV 698 ++ I +IN+ Sbjct: 667 KLELSIDKMINI 678 >gi|239817704|ref|YP_002946614.1| glycyl-tRNA synthetase, subunit beta [Variovorax paradoxus S110] gi|239804281|gb|ACS21348.1| glycyl-tRNA synthetase, beta subunit [Variovorax paradoxus S110] Length = 712 Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 220/738 (29%), Positives = 355/738 (48%), Gaps = 71/738 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L L +G+ + Y +P RL +L ++ Sbjct: 7 NLLVELFVEELPPKALKKLGDAFAGVLRDQLVAQGLAEPASVLTAYASPRRLAAHLTHVA 66 Query: 61 PHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKK--DPKKGDVYLA 111 + +K + ++L P G A+ L + G + +K+ D K ++ Sbjct: 67 ERAADKAVSQKLMPVAVGLDASGQPTPALLKRLAALGADASAVPGLKRAMDGKAEALFYE 126 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW---STTHSPI-SAFSWIRPLKSILCILV 167 K L E + K + AI K+P PK M + S P S+ S++RP ++ + Sbjct: 127 STAKGATLAEGLQKALAE-AIAKLPIPKVMSYQLESGCELPGWSSVSFVRPAHGLVAL-- 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRR 225 + ++ ++ + G T+GHRF A P+ ++ + Y ++ E V+ E RR Sbjct: 184 ---HGDAVVPVEALGLQAGRETHGHRFEAAVDPVVLRDANSYALQMQDEGAVIASFEARR 240 Query: 226 NAILNDAHRLASAVGLEL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I A VG + D LL+E+ LVE V + SF++++L +P+E + LT+ Sbjct: 241 TEIARQLAAAAVRVGGAAVPIHDDALLDEVTALVERPNVLVCSFEREFLEVPQECLILTM 300 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F L N F++VSNI D +A+V GN RVV RL DA F+ DQ+ Sbjct: 301 KANQKYFPLLDASNRLTNKFLVVSNISPEDA-SAVVGGNERVVRPRLADAKFFF--DQDR 357 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 +L+S ES K VV+H K+GTQGERV R+ + + IA+ Sbjct: 358 KKSLASRVESLGK--------------------VVYHNKLGTQGERVERVMRIARGIAEK 397 Query: 404 ID--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + A VA +A L+KADL T++V EFPELQG +G+ YA+ DAIE+H KP Sbjct: 398 LGGAALVAHAVQAAQLAKADLVTDMVGEFPELQGTMGRYYALHDGLAAEVADAIEDHYKP 457 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P N + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E + Sbjct: 458 RFAGDELPRNSVGLVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLIEKDL 517 Query: 522 DIPLSQFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + L ++D L F DRL L ++ ++A+L P Sbjct: 518 PLKLDALLQDAAAQFKDIDGFDTGKATAELQDFILDRLAGSLREQGASAQEVDAVLAPRP 577 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L + L+ + F + + KRI IL KK E +S L AE Sbjct: 578 QRLGEVPKLLAAVRAFAALPAAAALAAANKRIGNIL----KKAPEADAHVSELLLKEPAE 633 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K L+A +++ D Y L ++ EP++ FFD V+VN + ++R NRL L Sbjct: 634 KALHAAMAEVVPAANAQFDAGDYTASLQTLAALREPVDAFFDGVMVNAEQADLRLNRLGL 693 Query: 685 LQYIKNIILIVINVQKIV 702 L + + V ++++ Sbjct: 694 LMSLHAAMNRVAQLERLA 711 >gi|91774999|ref|YP_544755.1| glycine--tRNA ligase [Methylobacillus flagellatus KT] gi|122985601|sp|Q1H3M3|SYGB_METFK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91708986|gb|ABE48914.1| glycyl-tRNA synthetase beta chain [Methylobacillus flagellatus KT] Length = 708 Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 219/754 (29%), Positives = 375/754 (49%), Gaps = 99/754 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM---------------RQ 45 M + L+E++ EE+P KA +++ I + ++ Q++ + Sbjct: 1 MSNLLVELFVEELPP----KALQNIGISFADQIYHS-LVTQDLIEPPSELDAANPSPWKW 55 Query: 46 YWTPHRLFLYLKGLSPHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQ 98 + +P R+ ++++ ++ +P+K + ++L P G A+ L + G + Q Sbjct: 56 FASPRRIAVWIRNVTQKAPDKQLAQKLMPASVGLDADGNATPALLKKLAALGADESAVSQ 115 Query: 99 IKKDPKKGDVYLAVLRKPKR--LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWI 156 +K++ G + +L + R + + L+ + AI K+P PK M + S +++ Sbjct: 116 LKRE-HDGKAEVLLLDRTVRGATLAEGLQKALDEAIAKLPIPKVMTYQLEDG-WSNVNFV 173 Query: 157 RPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEE- 214 RP ++ + E ++ + + GN T GHRF A PI +++ D Y L++ Sbjct: 174 RPAHGLVALHGNE-----VVPIRALGLTAGNRTQGHRFEATQSPIVLRNADSYAEQLQQD 228 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+ + RR+ I A + L +ED+ LLEE+ LVE V +G F++ +L + Sbjct: 229 GAVIPGFKERRDEIARQLEAAAGKLKLRPIEDEALLEEVTALVERPNVLVGQFEQAFLAV 288 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT+K NQK F +G L N F++VSNI +D +A+V GN RVV RL DA Sbjct: 289 PQECLILTMKANQKYFPLLDAQGRLTNKFLIVSNISPADP-SAVVGGNERVVRPRLADAK 347 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ K L+ R+ L VV+H K+G+QGER++R+ Sbjct: 348 FFFEQDRK--------------------KTLESRIPGLS--KVVYHNKLGSQGERIARV- 384 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKA--------DLCTEIVREFPELQGKIGKEYAVLQN 446 +IA L+ AL D+ + + DL T++V EFPELQG +G+ YA Q+ Sbjct: 385 ---SEIANLVG--TALGDQTLAAQASQAAQLAKADLVTDMVGEFPELQGIMGRYYA--QH 437 Query: 447 ENIS--CCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYA 504 E +S AIE+H +PR + +P NK+ + V+LADKL+TL ++I EKP+G KDP+A Sbjct: 438 EGLSDDIAYAIEDHYRPRFSGDALPRNKVGMIVALADKLETLAGLFSIGEKPTGEKDPFA 497 Query: 505 LRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH----------------DRLKLYLHD 548 LRR +GI+RI+ E + +PL+ +E Q L +F H DRL L D Sbjct: 498 LRRHAIGILRILTEGGLSLPLNTLLE-QTLSVFQHEFDHDTALQAVEEFIFDRLSGSLRD 556 Query: 549 RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR 608 + ++A+L + L I ++ + F S + + KR+ IL +K + Sbjct: 557 QGYSVQEVDAVLAMKPQLLGDITKRLEAVRAFASLPEAASLAAANKRVGNIL---KKSDS 613 Query: 609 EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 I I+P L +AEK L ++ Q++ Y L ++ P++ FFD V Sbjct: 614 AIEAAINPALLQEDAEKTLAQALAQVQPQAQQAFAAGDYTGSLKALAALKAPVDAFFDHV 673 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +VN +D ++ NRL+LL + + V ++ ++ Sbjct: 674 MVNAEDPALKTNRLALLATLHQAMNQVADLSRLA 707 >gi|313618900|gb|EFR90764.1| glycyl-tRNA synthetase, beta subunit [Listeria innocua FSL S4-378] Length = 688 Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 207/722 (28%), Positives = 349/722 (48%), Gaps = 81/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEMAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q ++ + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDDEGNWSKAALGFAKS---QKVAPEDLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLGKTATINQPSD-YPHALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A + + D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGVLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ A E F + + + +++ I K E +E+ P E E+ L+ Sbjct: 564 IDRAQILNK---HADAEWFRPTIEALTRVVKI--SKKYEDGVEVDPNLFENEYEQELFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R DL + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYAGLTIVDRLKAFADLRTT----IDGYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 II 692 I Sbjct: 675 FI 676 >gi|15607085|ref|NP_214467.1| glycyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5] gi|11387164|sp|O67898|SYGB_AQUAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|2984350|gb|AAC07870.1| glycyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5] Length = 664 Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 218/722 (30%), Positives = 358/722 (49%), Gaps = 87/722 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+PA + + A + L + LL + ++ Y TP RL LY K Sbjct: 4 ELLIEIGTEELPAGVINPALDYLKDKINSLLNA-----RQVKTYGTPRRLTLYFKDFENE 58 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 EK E GP G KA++GFL+ +KKD KG+ Y+A++RK Sbjct: 59 RKEKKEVIWGPPKNVAYDEKGNPTKALEGFLKKNNASLEEVKVLKKD--KGE-YVAIVRK 115 Query: 116 --PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K IE + + + + VP+PK MRW+++ ++ RP++ IL + + Sbjct: 116 VIEKSPIEKLQEEFEEILLS-VPFPKRMRWTSSKR----ITFSRPVRWILALFNGQ---- 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ L E+ N TYGHRF + + + + Y + L+E V+ D R+ IL Sbjct: 167 -VLKLRFGELESSNKTYGHRFLSKGEVTINNPADYEKTLKEHYVIPDFNERKEIILRALE 225 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + VG + + L+EE+ LVE+ +G FD+KYL LP L+ T+ + + F Sbjct: 226 KSSQEVGGKPSYPEGLVEEVTNLVEYPFPVLGKFDEKYLELPP-LVITTVAAHHQRFFCF 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N F+ +SN + ++ I +G +V+ ARLEDAL F++ D Sbjct: 285 EKDGKLLNYFLGISNNKPNE---KIKEGYEKVLRARLEDALFFYRED------------- 328 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L K L + L V+FH K+G+ E+ R+ + +K+ L+ + V Sbjct: 329 -------LKKDLKSLIPELK--KVLFHPKVGSMYEKEERMEKIAQKLCPLLKCEWEKVKE 379 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ LSK DL TE+V+E ELQG +G YA Q + A+ E PR + VP Sbjct: 380 AVWLSKVDLLTEMVKELDELQGYMGYVYAKAQGYDEEVAKALWEQYFPRSLEDKVPETTT 439 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 +SL+DK+D L +F+ E P GS DPY LRR+ GII+I+ +D+ L F E Sbjct: 440 GTILSLSDKIDNLYSFFKAGEIPKGSSDPYGLRRSAFGIIKIVDVKNLDLNLEDFKEIYG 499 Query: 531 ----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE---FFSS 583 L+ F RL YL D + D++ A+L N+ + ++ K +N + + Sbjct: 500 EFKQYPKLVEFLKQRLISYLEDYPV--DIVRAVL-----NVYSPMEPYKVINSVRVLYEA 552 Query: 584 AKGEKF---LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 +K +F + +AKR+ +I+ + K + E+ + L EAE+ LY +++F Sbjct: 553 SKSPEFPSVVEAAKRVIRIIPKDWK-----NYEVDEKLLSEEAERELYQKLTEF------ 601 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++K +LL + E I+ FFD V V +D ++R+NR+SLL+ ++N+ + + Sbjct: 602 --ENKELKSPLELL-PLKEYIDKFFDNVKVMAEDEKIRNNRISLLKRVENLFRTFGDFNE 658 Query: 701 IV 702 IV Sbjct: 659 IV 660 >gi|300310051|ref|YP_003774143.1| glycyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] gi|300072836|gb|ADJ62235.1| glycyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] Length = 706 Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 199/732 (27%), Positives = 355/732 (48%), Gaps = 64/732 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWT--PHRLFLYLKGLSP 61 L+E+ +EE+P + K + + + L+ G + + P RL + + + Sbjct: 5 LLVELVTEELPPKALAKLGDAFATGIFNGLQSRGYLDADATATAYATPRRLAVSITQVCA 64 Query: 62 HSPEK-IEERLGPRVGA----GK------KAIDGFLRSTGLQTISDCQIKK--DPKKGDV 108 SP+K I E++ P A G+ K + STG I+ Q+++ D K Sbjct: 65 ASPDKSIREKVLPVSVALDAEGRPSAPLVKKLAALAASTGATVITPDQLERAQDGKAESF 124 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFS--WIRPLKSILCIL 166 + K L L+ + ++ K+P PK M + + + ++RP ++ +L Sbjct: 125 FYTYTAKGSALAVG-LQAALDESLSKLPIPKVMSYQRQFGRAAGETVHFVRPAHYLVALL 183 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRR 225 ++ ++ + G T GHRF + +++ + D Y+ L ++ V+ RR Sbjct: 184 -----GNDVVPINTLGLDAGRTTLGHRFLSAGALQIAAPDAYVESLAQQGNVIASFTERR 238 Query: 226 NAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 I A LA A +++ + LL+E+ LVEW V+ F+ ++L +P+E + LT++T Sbjct: 239 EKI--RAALLAKAGADQVLMPEALLDEVTALVEWPVVYECKFEDEFLAVPQECLILTMQT 296 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 NQK F G L + F++VSN++ + I+ GN RVV RL DA F+++D+ Sbjct: 297 NQKYFALTDANGRLRSRFLIVSNLETAHP-EHIIGGNERVVRPRLSDAKFFFEQDKK--- 352 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 K L +R+ +L +VV+H K+G Q +R R++ L KIA L+ Sbjct: 353 -----------------KTLAERVPQL--ANVVYHNKLGNQLQRTERVQALAGKIASLLG 393 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 DV L +R +L+KADL T++V EFPELQG +G YA E A EH +PR Sbjct: 394 GDVKLAERGALLAKADLLTDMVGEFPELQGIMGTYYARHDGEADEVALAASEHYQPRFAG 453 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +PT V+LADKL+TL+ W I +P+G KDP+ALRR LG++R+++E ++ + L Sbjct: 454 DALPTTATGTAVALADKLETLVGIWGIGLQPTGDKDPFALRRHALGVLRMLVEKRLPLSL 513 Query: 526 SQFIEDQNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + ++ + F +DRL+ L +R + +EA++ + + L + Sbjct: 514 TALLDAATGLFAGNANFKDPRADVQAFIYDRLRGLLRERGFAQNEVEAVVAQQPEVLDNV 573 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 V+ ++ + F + + E + KRI IL E + + L AE+ L+A Sbjct: 574 VERLQAVQAFAALPEAEALAAANKRITNILKKIEGVAIDAHGAVQESLLQEAAEQGLFAA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++ + + L + + ++ FF+ V+VN +D ++R NR +LL + Sbjct: 634 MQTTRPQVEAAYAKGDFAGALKALAQLRQNVDAFFNDVMVNAEDEQLRKNRQALLAALHG 693 Query: 691 IILIVINVQKIV 702 ++ V ++ K+ Sbjct: 694 MLNQVADISKLA 705 >gi|313892678|ref|ZP_07826261.1| glycine--tRNA ligase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313442769|gb|EFR61178.1| glycine--tRNA ligase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 683 Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 215/733 (29%), Positives = 347/733 (47%), Gaps = 88/733 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL+ Sbjct: 4 DLLFEIGAEEIPAGFMPNILGQLKQLAGTKLNDAHLPFESIETYGTPRRLALIVKGLADA 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQT----ISDCQIKKDPKKGDVYLA 111 S E E GP G KA GF R GL + D I + K V Sbjct: 64 SAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVADLVVEDGYIYAETKTAGV--- 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 121 ----PAK---DIVSEMLPQLITGLNFPKSMHWGDLDA-----KFVRPVRWLVALL----- 163 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 164 DEEVIPVEFATVQSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQ 223 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 224 LHDMAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFP 283 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L F+ V N SD +VQ GN RV+ ARL+DA F Sbjct: 284 LVGQDGKLLPMFLTVRN--GSDHSIEVVQAGNERVLRARLDDAKFF-------------- 327 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDA 406 FN D KPL R L +VF +G ++ R+ RV G++ DA Sbjct: 328 ------FNEDRKKPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDA 379 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V L +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + Sbjct: 380 AVVL-ERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRFAGD 438 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 439 VLPQTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLR 498 Query: 527 QFIEDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + +L FF RLK DR++ H +I+ +L ++N L++ Sbjct: 499 PIFKASMELLNVDADKQEELLNQVEEFFTLRLKNIFLDREVPHHVIDLLL---SNNELSV 555 Query: 571 VDLIKHLNEFFSSAKGEKFLL--SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 D +N ++ E L + R++ ++ K+ E + ++ L +AEK L+ Sbjct: 556 ADAEGLVNSLLANRIDENVELVQAYTRMYNLV-----KDVEYT-GVNSDLLKEDAEKALF 609 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 S + + Y + + + I FF+ V+V D ++ NRL L++ Sbjct: 610 EAASKASEASLAAWEAGDYAAVVAVPAILVPTINQFFEDVMVMDKDEAIKANRLQLVRLA 669 Query: 689 KNIILIVINVQKI 701 +++ I+ ++ + Sbjct: 670 YSVMAIIGDISAL 682 >gi|15903371|ref|NP_358921.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae R6] gi|116516232|ref|YP_816770.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae D39] gi|148984818|ref|ZP_01818071.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP3-BS71] gi|73919753|sp|Q8DP66|SYGB_STRR6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|122278344|sp|Q04JM8|SYGB_STRP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|15458973|gb|AAL00132.1| Glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae R6] gi|116076808|gb|ABJ54528.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae D39] gi|147922840|gb|EDK73956.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP3-BS71] gi|301800324|emb|CBW32950.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae OXC141] Length = 678 Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 347/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ ++ + G+ + Sbjct: 181 GRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|116872889|ref|YP_849670.1| glycyl-tRNA synthetase beta chain [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458471|sp|A0AIQ9|SYGB_LISW6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116741767|emb|CAK20891.1| glycyl-tRNA synthetase beta chain [Listeria welshimeri serovar 6b str. SLCC5334] Length = 688 Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 206/715 (28%), Positives = 344/715 (48%), Gaps = 81/715 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + L E + ++ ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAQYVTSSVAQLEKRVSDWLNENQITFEKIKTYSTPRRLTVLVEAMAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF RS Q + + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDDEGNWSKAALGFARS---QKVEPADLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ E R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLGKTATIKQPSD-YPNALLEQFVVVNAEERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L S ++ ED+DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELESMENWQIKEDEDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++ L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSKDEELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIAIAIREHYLPSSAEGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----L 525 + +++ADKL+TL+ F+ +N P+GS DP+ LRR+ G +RII N DIP L Sbjct: 444 QTDLGSIIAIADKLETLVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLELL 503 Query: 526 SQFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 S+ ++ + + F +RL++ L + IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGAVELPSDDVKKEVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNTIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 VD + LN+ S + + R+ I K E ++E+ P + E+ L+ Sbjct: 564 VDRAQILNKHVESDWFRPTVEALTRVMNI-----SKKHEGNVEVDPSLFENKYEQALFDE 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 I R L +I + +FD LV ++ E+++NRL+LL Sbjct: 619 IEKLKYDYANLTIVDRLRAFAALRTTIDD----YFDNTLVMSENIELKNNRLALL 669 >gi|149002871|ref|ZP_01827797.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] gi|237649565|ref|ZP_04523817.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae CCRI 1974] gi|237821555|ref|ZP_04597400.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae CCRI 1974M2] gi|147759165|gb|EDK66159.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] Length = 678 Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 347/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ ++ + G+ + Sbjct: 181 GRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVKTLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|326803489|ref|YP_004321307.1| glycine--tRNA ligase, beta subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326651577|gb|AEA01760.1| glycine--tRNA ligase, beta subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 697 Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 213/733 (29%), Positives = 350/733 (47%), Gaps = 79/733 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +L+EI EE+PA+ +E + L E + Y ++ + TP R + +K L+ Sbjct: 6 YLIEIGLEEMPAQYVRSISEQFQERVENFLDENRLSYGSIETFATPRRFAVLVKELADRQ 65 Query: 64 PEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 EE GP G KA GF R GL TI D K+ + YL V + Sbjct: 66 STFEEEAKGPAKRIAQDEAGNWTKAAMGFARGKGL-TIDDIYFKELKGEDYAYLTVRSEG 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 ++E VL I + ++ +P SM W + F +IRP+ I+ +L E +I Sbjct: 125 LNVVE-VLADI-KNCVSEMNFPVSMHWDS-----HEFRYIRPVHWIVSLLDKE-----VI 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 ++ + GN++ GHRF +++ Y LE+A V++D + R+ I LA Sbjct: 173 PFNVLAVEAGNLSRGHRFLHNESVEISHASLYEESLEKAAVIVDQDKRKQMIKEQIEALA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++ D+DLLEE+ +VE+ F+G FD+KYL LP ++ +++ +Q+ F +E Sbjct: 233 KENNYQVPLDQDLLEEVTQIVEYPTAFVGDFDEKYLSLPAPVLITSMREHQRYFAVEDQE 292 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI + N D + GN +V+ ARLEDA+ F + DQ + + Sbjct: 293 GKLLPHFIALRN-GNHDHIETVKNGNEKVLVARLEDAMFFLEEDQKHTID---------- 341 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI-----------AQLID 405 D ++ L DV FHA+IG+ +++ R + + QL Sbjct: 342 ---DFAQKL---------TDVTFHAEIGSMKQKMERTGKIAHYLYENWAMHEVFAGQLAT 389 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +DR + K DL T+IV EF ELQG IG+ YA E+ AI EH P G Sbjct: 390 DFTQEIDRTSAIYKFDLVTQIVDEFSELQGIIGEIYAKKAGEDPQVATAIREHYLPSGNA 449 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +P + + + +++DKL+++I+F+AI + PSGS DP+ALRR +GI+ I+ + + Sbjct: 450 SELPQSPLGLLFAISDKLESIISFFAIGKIPSGSNDPFALRRQMIGILAILEAEHLPLEW 509 Query: 526 SQFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 Q ++D Q +I F DRLK L D++IR D+ +A + ++L Sbjct: 510 HQALKDIFDQVYDFDQNKQVELSQAIIQFLSDRLKNNLADKEIRFDISQAAREAKYIDVL 569 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 TI+ + LN + + + +RI I+ ++ E+ L ++ +E LY Sbjct: 570 TIIQSAELLNAHKEDEDYKDNVEAWQRINNIILKVSQEEVELPL-VNEDLFESNSESDLY 628 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +SD + E ++ + Y +I L I + FF+ +V D++++R+NRL+LL I Sbjct: 629 QAVSDL--RLDEGVE-EAYEEITALTPIITQ----FFEDNMVFTDNQDIRNNRLALLSLI 681 Query: 689 KNIILIVINVQKI 701 I NVQ + Sbjct: 682 DQAITKHYNVQAL 694 >gi|307706944|ref|ZP_07643743.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK321] gi|307617658|gb|EFN96826.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK321] Length = 678 Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 204/698 (29%), Positives = 348/698 (49%), Gaps = 73/698 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAVQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ + ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYITKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIETEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 +V FH KIG+ E R +I +L + A L + + RA + K DL Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF----F 538 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F + Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 539 HDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 ++ ++ ++ R D+ E++L N + D+++ + ++K E F Sbjct: 517 ENKAEVMDFIKARVDKMMGSTPKDIKESVLAGSN---FVVADMLEAASALVEASKEEDFK 573 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 S + + + + EK E + E EK L + S K+ Sbjct: 574 PSVESLSRAFNLAEKA--EGVATVDSALFENEEEKALAEAVESLVLSGTASQQLKQ---- 627 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L ++ I+ FF+ +V ++ VR NRL++L ++ Sbjct: 628 ---LFALSPVIDAFFENTMVMAENEAVRQNRLAILSHL 662 >gi|296161021|ref|ZP_06843832.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. Ch1-1] gi|295888720|gb|EFG68527.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. Ch1-1] Length = 699 Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 210/686 (30%), Positives = 340/686 (49%), Gaps = 61/686 (8%) Query: 42 NMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ-- 92 + +Y TP RL + +K + +PEK + E++ P + G + L + G Sbjct: 49 SFERYATPRRLAVTIKNVRAVAPEKHVREKVLPVSVALDKDGQPTAPLAKKLAALGFPDF 108 Query: 93 TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 +++D + +D K + + P + + L++ + + K+P PK M + + Sbjct: 109 SVNDLERAQD-GKAEAFFLRYAAPGATLAEGLQSALDETLAKLPIPKVMTYQRPDG--TN 165 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 ++RP + + E+I+ + I + T GHRF + +++Q D Y L Sbjct: 166 VQFVRPAHRLTAL-----HGEQIVPVSALGIDADDTTLGHRFLSEGFVQIQHADSYAETL 220 Query: 213 -EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKY 271 + V+ + R+ I H LA A G ++V + LL+E+ LVEW V+ F+ ++ Sbjct: 221 LHKGRVVANFSDRKETIRT--HLLAQANGDQVVMPESLLDEVTSLVEWPVVYACRFEDEF 278 Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 L +P+E + LT++TNQK F G L + F++VSNI+ S G IV+GN RVV RL Sbjct: 279 LQVPQECLILTMQTNQKYFALTDANGKLRSRFLIVSNIETSTPGD-IVEGNERVVRPRLA 337 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F+++D+ K L R+ L +VV+H K+G+ +RV Sbjct: 338 DAKFFFEQDKK--------------------KTLADRVPLL--ANVVYHNKLGSALQRVE 375 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R+ L IA+LI ADVAL RA L+KADL T++V EFPELQG +G YA E Sbjct: 376 RVEALAGAIAELIGADVALAKRAARLAKADLITDMVGEFPELQGTMGTYYARHDGEPEEV 435 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A EH +PR + +PT V+LADKL+TL+ W I +P+G KDP+ALRR LG Sbjct: 436 ALACSEHYQPRFSGDALPTTTTGTVVALADKLETLVGIWGIGLQPTGEKDPFALRRHALG 495 Query: 512 IIRIILENKIDIPL--------SQFIEDQNLI-------LFFHDRLKLYLHDRDIRHDLI 556 ++RI++E ++ + +QF N++ F DRL+ L +R I Sbjct: 496 VLRILVEKQLPVDFVELLRTAYAQFAAVPNVVDSTQAIYEFSMDRLRGLLRERGYAPGEI 555 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L L IV + + EF S A+ + KRI IL +K + + Sbjct: 556 DAVLALNPTRLDDIVARLDAVREFASLAEAASLAAANKRISNIL---KKSEGAATGGVQV 612 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 L+ AEK L+A + +Q + + Y L ++ EP++ FF+ V+VN +D Sbjct: 613 ALLVEAAEKALHAQLEQVAPRVQSQLAARDYTGALTALAALREPVDTFFNDVMVNAEDPA 672 Query: 677 VRDNRLSLLQYIKNIILIVINVQKIV 702 +R NRL+LL + + V ++ ++ Sbjct: 673 LRANRLALLGALHQQMNCVADISRLA 698 >gi|325849593|ref|ZP_08170831.1| glycine--tRNA ligase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480074|gb|EGC83151.1| glycine--tRNA ligase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 561 Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 183/595 (30%), Positives = 303/595 (50%), Gaps = 67/595 (11%) Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 ++ + +P+SMRW + + RP++ L +L ++I+D D + I N T G Sbjct: 9 VKSLNFPRSMRWGG-----RSIRFARPIRYFLSLL-----DDEILDFDAEGIKVSNTTKG 58 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HR I V +D Y+ L+E V+L + RR IL +R A +G + ++D+DLLE Sbjct: 59 HRVLGKSEIVVDKIDSYLDLLKENFVILSYKERREIILRGLNRYAKEIGGKFLKDEDLLE 118 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E+I +VE+ V MG D +YL LP+E+I +K +Q+ F L F+LV N Sbjct: 119 EVINIVEYPTVLMGELDHEYLKLPKEVIITPMKDHQRYFPIVDDNENLMPYFLLVRN--- 175 Query: 312 SDGGAA--IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRM 369 D A ++ GN +V+ ARLEDA F+ D N K L++ + Sbjct: 176 GDDYAKENVISGNKKVLTARLEDAKFFYDIDNN--------------------KKLEEYV 215 Query: 370 ARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---RAIVLSKADLCTEI 426 +LD L F +G+ ++ R+ L K + + D RA LSKADL T++ Sbjct: 216 DQLDRL--TFFEGLGSMKQKTERLISLSKNYLEEFKLGEDVSDNLLRAAYLSKADLVTKM 273 Query: 427 VREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 V EF ELQG +G+ YA ENI +AIEE KPR +++P + I +S+ADK+DT+ Sbjct: 274 VIEFTELQGTMGRIYATNSGENIQVANAIEEAYKPRSSEDSLPKSVAGIVLSIADKIDTI 333 Query: 487 INFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------------- 531 + I + +GS+DP+ LRR+ +G+I II + KID+ + ++D Sbjct: 334 TGHYIIEDYVTGSQDPFGLRRSAIGVINIIADKKIDVDIKDLVKDSLFVYTEKNELSFDY 393 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + + FF DRLK ++D+ R+DL+ A+L N+L++++ +K L EF E Sbjct: 394 NQTLEKITEFFIDRLKNMMNDKGYRYDLVNAVLNTGESNVLSVIEKVKALEEFVGQDDSE 453 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + L RI + S++++ + L EK+ Y I++ + ++ + K Y Sbjct: 454 EILNYFTRINNFTKDFD------SIDVNVEKLDEGLEKQYYDCINNLES--EKYLGQKLY 505 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + + + S + + D ++ VDD E+++NRL+LL + I V N++ +V Sbjct: 506 QKALEEIASTRQIGNEYLDNTMIMVDDEEIKNNRLALLNKLAKDISRVFNIKDLV 560 >gi|260101318|ref|ZP_05751555.1| glycyl-tRNA synthetase [Lactobacillus helveticus DSM 20075] gi|260084903|gb|EEW69023.1| glycyl-tRNA synthetase [Lactobacillus helveticus DSM 20075] Length = 687 Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 212/736 (28%), Positives = 351/736 (47%), Gaps = 90/736 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EEIPA + ++ + L+ LKE G+ +++++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEIPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKITQDADGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ + ++ K Sbjct: 121 KEGKKASDILLGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSDVIPVK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+D I G T GHRF + + + D Y L++ V+ + E R++ I+N + Sbjct: 175 ILD-----ITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQMNE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVKKNHWQIKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N D I+ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRN-GNKDYLDNIISGNEKVLVARLDDAQFFYDEDR------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL + L +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 335 -------KYPLSHFVDPLK--NVSFHDKIGSMAEKIQRVRMIGDYLAKRWDLPENVVTDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLENV 468 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P GPL Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPL--- 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 443 PETTVGSLLSVADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEV 502 Query: 529 I-------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + +Q + F DR+K YL ++D+++A+L + Sbjct: 503 LPEIINMLGGVTPAKLPKGDSEQEIADFIRDRVKQYLQKNKFKYDIVDAVLASSQQDPSQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ L + + + S RI IL +K +++ + +E LYA Sbjct: 563 ILAAANVLQPHHDDEEFKPVVESLTRINNIL---KKAKFNGKVDVDESLFVDNSETELYA 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSIC--EP-IEIFFDQVLVNVDDREVRDNRLSLLQ 686 + + + + DL +P I+ +F+ ++ D V++NRL+ L Sbjct: 620 RVQNL----------QNIESLADLYQGFVHLQPVIDQYFEANMIMDKDENVKNNRLAQLY 669 Query: 687 YIKNIILIVINVQKIV 702 + + + ++ K+V Sbjct: 670 AVSELADRLGDLSKLV 685 >gi|303231466|ref|ZP_07318197.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-049-V-Sch6] gi|302513903|gb|EFL55914.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-049-V-Sch6] Length = 683 Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 219/738 (29%), Positives = 347/738 (47%), Gaps = 98/738 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL+ Sbjct: 4 DLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGLADT 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQT----ISDCQIKKDPKKGDVYLA 111 S E E GP G KA GF R GL + D I + K V Sbjct: 64 SAEISERHKGPSASIAYDAEGNATKAAIGFARGKGLDVADLVVEDGYIYAETKTAGV--- 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 121 ----PAK---DIVTDMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWLVALL----- 163 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 164 DEEVIPVEFATVKSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQ 223 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 224 LHDIAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFP 283 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L F+ V N SD +VQ GN RV+ ARL+DA F Sbjct: 284 LVDQDGKLLPMFLTVRN--GSDHSIEVVQAGNERVLRARLDDAKFF-------------- 327 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI----DA 406 FN D KPL R L +VF +G ++ R+ LG ++ DA Sbjct: 328 ------FNEDRKKPLIDRQDGL--TKIVFQEGLGNLADKTERLLTLGHVFSEECELHEDA 379 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V L +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + Sbjct: 380 RVVL-ERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRFAGD 438 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 439 VLPQTEAGKVLSIIDKIDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLNSEWNISLR 498 Query: 527 QFI-EDQNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 I E NL+ F RLK DR++ H +I+ +L ++N L++ Sbjct: 499 PIIVESMNLLNVPADKQDELLGQVEEFITLRLKNIFLDREVPHHVIDLLL---SNNELSV 555 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY-------LLLEA 623 D A+G L A RI + + + + R +L Y L +A Sbjct: 556 AD-----------AEGLVKALLANRIDENVELVQAFTRMYNLVKDVTYTGVDKSLLKEDA 604 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E+ LY + + ++ D Y + + ++ I FF+ V+V D ++ NRL Sbjct: 605 ERALYEMATKASEASIDAWDKNDYDAVVAVPATLVPGINKFFEDVMVMDKDEAIKANRLQ 664 Query: 684 LLQYIKNIILIVINVQKI 701 L++ +++ I+ ++ + Sbjct: 665 LVRLAYSVMAIIGDISAL 682 >gi|182684433|ref|YP_001836180.1| glycyl-tRNA synthetase beta subunit [Streptococcus pneumoniae CGSP14] gi|238691171|sp|B2IQU1|SYGB_STRPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|182629767|gb|ACB90715.1| glycyl-tRNA synthetase beta subunit [Streptococcus pneumoniae CGSP14] Length = 678 Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 346/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLG-QETKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKTIEAERGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|90961888|ref|YP_535804.1| glycyl-tRNA synthetase beta chain [Lactobacillus salivarius UCC118] gi|122448989|sp|Q1WTP1|SYGB_LACS1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|90821082|gb|ABD99721.1| Glycyl-tRNA synthetase beta chain [Lactobacillus salivarius UCC118] Length = 693 Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 214/718 (29%), Positives = 346/718 (48%), Gaps = 78/718 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL+ Sbjct: 5 FLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 + EE GP G KA GF+R G+ T+ D K+ KG Y+ V + Sbjct: 65 ADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGV-TVDDIFFKE--LKGTEYVYVKKFI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + +VL + VA+ + +P MRW + F ++RP+K ++ +L +++ Sbjct: 122 PGKPVSEVLTGMKDVAMD-LKFPTMMRWGSND-----FEYVRPIKWLVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ +I G T GHRF + V S D Y+ LE V+ D R+ I L Sbjct: 171 VPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQIDDL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F + Sbjct: 230 ATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFYVTDK 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L F+ V N D +V GN +V+ ARLEDA F++ DQ + Sbjct: 290 DGNLLPNFVSVRN-GNKDYLENVVAGNEKVLTARLEDAKFFYEEDQQH------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 + + RL V+FH KIGT E++ R+ +L K + L + ++ +D Sbjct: 337 --------TIADYVERLKK--VMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETELKDLD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P +P + Sbjct: 387 RASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGELPQSN 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------ 526 + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 447 VGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLLHEAI 506 Query: 527 --QFIEDQNLI-------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + E ++L F DRL L R D+++A++ + + + Sbjct: 507 NYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPFIQAL 566 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L++ ++ + + R+ ++ KK E + L E + V+ Sbjct: 567 QAAQVLSKHAEDDNFKEVIEALTRVTRLA----KKAPEFGSDAVIDSTLFENDTE--KVL 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +D ++ ++ +L S+ + I +FD ++ DD +V++NR LLQ +K Sbjct: 621 ADEFAKVEAGYGDAEMNEKFTILSSLKDSITAYFDATMIMADDEKVKNNR--LLQLVK 676 >gi|261344460|ref|ZP_05972104.1| glycyl-tRNA synthetase, beta subunit [Providencia rustigianii DSM 4541] gi|282567368|gb|EFB72903.1| glycyl-tRNA synthetase, beta subunit [Providencia rustigianii DSM 4541] Length = 689 Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 197/723 (27%), Positives = 338/723 (46%), Gaps = 71/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDGADISHGAVTWFAAPRRLALKVANLAAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 PDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAQMK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L +V ++ K+P PK MRW+ + ++RP+ ++ +L ++ ++ Sbjct: 124 GQAVSELLIDMVSRSLSKLPIPKLMRWADKET-----QFVRPVHTVTLLLGSD-----VV 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + ++ I G GHRF + + D Y L E V+ D E R+ I D+ + Sbjct: 174 EGEILGIKSGRTIRGHRFMGEAEFTIDNADQYPEILRERGKVIADYETRKATIKADSEKA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQALGGKADLTESLLEEVTSLVEWPVVLTAKFEEKFLDVPSEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 G L FI V+NI++SD I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 AGKLMPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++GT ++ R+ L IA I ADV Sbjct: 352 --------------------------VLFQQQLGTLRDKTDRLEALSGWIASKIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ Sbjct: 386 ATRAGLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + + Sbjct: 446 TDVSAALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTQ 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLTNKNVVDDVVEFMLGRFRSWYQELGYSIDAIQAVLARRPTQPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F S + + + KR+ IL+ K + +++ + L E +L + Sbjct: 566 AVTHFRSLDEAQALAAANKRVSNILS---KSDEKLADSVLASVLKTPEEVKLATHLVVLQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + Y + L S+ E ++ FF V+V +D VR+NRL+LL ++ + L V Sbjct: 623 DKLAPMFAERNYQEALVELASLREVVDEFFANVMVMDEDPAVRNNRLTLLSQLRELFLKV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|258647017|ref|ZP_05734486.1| glycyl-tRNA synthetase, beta subunit [Dialister invisus DSM 15470] gi|260404458|gb|EEW98005.1| glycyl-tRNA synthetase, beta subunit [Dialister invisus DSM 15470] Length = 683 Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 203/710 (28%), Positives = 343/710 (48%), Gaps = 74/710 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EE+PA M E + + L E + ++ + Y TP RL + + + Sbjct: 4 NLLLEIGTEEMPANMMSGIVEQMHALAGAKLNEARIAFEKVDVYATPRRLAVIVTAAADA 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ++ GP + G KA +GF R G+ K+G+ A + Sbjct: 64 QPDEEVKKRGPSIRAAYDENGNMTKAAEGFARGQGISAADLI------KEGEYTWAQVVN 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +++E++L + I + + +SMRW + +IRP++ I+ + A E + Sbjct: 118 KGKMVEEILPALFTSLITGLNFTRSMRWGDEEA-----RFIRPVRWIVAL-----AGEAV 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ + G ++ GHRF ++++S + Y + +A V+ D + RR I + Sbjct: 168 VPMEFAHVRSGRMSRGHRFLCKEEVEIKSPETYKETMRKAFVIADQDERRALITAGLQKT 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G ++ + DLLEEI LVE+ G D+++L LP + ++ +Q+ + R Sbjct: 228 AKELGGQVWHNADLLEEINYLVEYPTPLYGRIDEEFLDLPVPAVVTPMRDHQRYYPVRKE 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L F+ V N D VQ GN RV+ ARL+DA F+ D+ +L +E+ Sbjct: 288 DGSLMPYFLTVRN--GGDRAIRNVQIGNERVLRARLDDAKFFFDGDRRK--SLEGHREAL 343 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 + N + +GT ++ R+ L + I + D + A V Sbjct: 344 SRIN--------------------YQEGMGTMLDKSDRLVKLVEAIGEDWNFTDTEKADV 383 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSK+DL T +V EF ELQG++GKEYA+L E AI E PR + +P + Sbjct: 384 RRAAYLSKSDLATGMVTEFTELQGEMGKEYALLDGEKPKVAAAIFEQYMPRFAGDVLPKS 443 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID--------- 522 I +SL+DKLD L + P+GS+DP+ALRR T+G + I+ + +I Sbjct: 444 SIGRALSLSDKLDNLAATFLRGLIPTGSQDPFALRRQTIGAVHILTDGEIHWDVRKGVKM 503 Query: 523 ----IPLSQFIEDQ---NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +P +Q +D + FF R+K L D + +D+++A+L D++ I +K Sbjct: 504 ALALLPGTQEEKDTAADKVEDFFRQRIKAILLDEGVDYDIVDAVLTGAVDDVYAI--FLK 561 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + S KGE + A + +++ I + K ++EI P+ L EAEK LYA + G Sbjct: 562 AHSMMDSHVKGELEMRQA--VTRLVNITKGKT---AVEIRPELLTEEAEKNLYAALEKAG 616 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + + Y L ++ PI F D V+V V++ VR+NR+SLL Sbjct: 617 EEVTSAYNAYDYGSALPALKTLTVPINQFLDSVMVMVEEEAVRNNRISLL 666 >gi|301301336|ref|ZP_07207480.1| glycine--tRNA ligase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851064|gb|EFK78804.1| glycine--tRNA ligase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 693 Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 214/718 (29%), Positives = 346/718 (48%), Gaps = 78/718 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL+ Sbjct: 5 FLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 + EE GP G KA GF+R G+ T+ D K+ KG Y+ V + Sbjct: 65 ADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGV-TVDDIFFKE--LKGTEYVYVKKFI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + +VL + VA+ + +P MRW + F ++RP+K ++ +L +++ Sbjct: 122 PGKPVSEVLTGMKDVAMD-LKFPTMMRWGSND-----FEYVRPIKWLVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ +I G T GHRF + V S D Y+ LE V+ D R+ I L Sbjct: 171 VPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQIDDL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F + Sbjct: 230 ATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFYVTDK 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L F+ V N D +V GN +V+ ARLEDA F++ DQ + Sbjct: 290 DGNLLPNFVSVRN-GNKDYLENVVAGNEKVLTARLEDAKFFYEEDQQH------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 + + RL V+FH KIGT E++ R+ +L K + L + ++ +D Sbjct: 337 --------TIADYVERLKK--VMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETELKDLD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P +P + Sbjct: 387 RASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGELPQSN 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------ 526 + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 447 VGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLLHEAI 506 Query: 527 --QFIEDQNLI-------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + E ++L F DRL L R D+++A++ + + + Sbjct: 507 NYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPFIQAL 566 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L++ ++ + + R+ ++ KK E + L E + V+ Sbjct: 567 QAAQVLSKHAEDDNFKEVIEALTRVTRLA----KKAPEFGSDAVIDSTLFENDTE--KVL 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +D ++ ++ +L S+ + I +FD ++ DD +V++NR LLQ +K Sbjct: 621 ADEFAKVEAGYGDAEMNEKFAILSSLKDSITAYFDATMIMADDEKVKNNR--LLQLVK 676 >gi|256956684|ref|ZP_05560855.1| glycyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256947180|gb|EEU63812.1| glycyl-tRNA synthetase [Enterococcus faecalis DS5] gi|315035616|gb|EFT47548.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0027] Length = 694 Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 216/729 (29%), Positives = 365/729 (50%), Gaps = 87/729 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + ES + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSESFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIIL 693 L I + L Sbjct: 675 LMQIAKMAL 683 >gi|227890915|ref|ZP_04008720.1| glycyl-tRNA synthetase beta chain [Lactobacillus salivarius ATCC 11741] gi|227867324|gb|EEJ74745.1| glycyl-tRNA synthetase beta chain [Lactobacillus salivarius ATCC 11741] Length = 693 Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 214/718 (29%), Positives = 346/718 (48%), Gaps = 78/718 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL+ Sbjct: 5 FLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 + EE GP G KA GF+R G+ T+ D K+ KG Y+ V + Sbjct: 65 ADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGV-TVDDIFFKE--LKGTEYVYVKKFI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + +VL + VA+ + +P MRW + F ++RP+K ++ +L +++ Sbjct: 122 PGKPVSEVLTGMKDVAMD-LKFPTMMRWGSND-----FEYVRPIKWLVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ +I G T GHRF + V S D Y+ LE V+ D R+ I L Sbjct: 171 VPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQIDAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F + Sbjct: 230 ATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFYVTDK 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L F+ V N D +V GN +V+ ARLEDA F++ DQ + Sbjct: 290 DGNLLPNFVSVRN-GNKDYLENVVAGNEKVLTARLEDAKFFYEEDQQH------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 + + RL V+FH KIGT E++ R+ +L K + L + ++ +D Sbjct: 337 --------TIADYVERLKK--VMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETELKDLD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P +P + Sbjct: 387 RASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGELPQSN 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------ 526 + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 447 VGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLLHEAI 506 Query: 527 --QFIEDQNLI-------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + E ++L F DRL L R D+++A++ + + + Sbjct: 507 NYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPFIQAL 566 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L++ ++ + + R+ ++ KK E + L E + V+ Sbjct: 567 QAAQVLSKHAEDDNFKEVIEALTRVTRLA----KKAPEFGSDAVIDSTLFENDTE--KVL 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +D ++ ++ +L S+ + I +FD ++ DD +V++NR LLQ +K Sbjct: 621 ADEFAKVKAGYGDAEMNEKFAILSSLKDSITAYFDATMIMADDEKVKNNR--LLQLVK 676 >gi|91791377|ref|YP_561028.1| glycyl-tRNA synthetase subunit beta [Shewanella denitrificans OS217] gi|123061408|sp|Q12TC1|SYGB_SHEDO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91713379|gb|ABE53305.1| Glycine--tRNA ligase [Shewanella denitrificans OS217] Length = 694 Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 217/708 (30%), Positives = 335/708 (47%), Gaps = 74/708 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + A+ L + + + Y P RL L + GL+ Sbjct: 5 NLLIEIGTEELPPKSLRTLADSFLANFSDELVKADLPFTAATWYAAPRRLALSITGLAVA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLVHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++ + A+ K+P PK MRW + +IRP+ ++ +L +E + Sbjct: 123 VGVQTNSLIAAMAQRALDKLPIPKPMRWGANST-----QFIRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I +L I I GHRF ++ D+Y+ L E+ VL D + R+ I DA Sbjct: 173 IGGELLGIKSDRIIRGHRFMGQASFQLDHADNYLSALKEQGKVLADYQLRKAIIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G +DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADIQEDLLEEVASLVEWPIVLTASFEEKFLNVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 293 KSGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALV 411 FN D L R++ L+ VVF ++GT R RI L IA ++ + + V Sbjct: 334 --FNTDKKHSLASRLSSLET--VVFQKQLGTLKARAERISQLAGFIATELNNNNLASSSV 389 Query: 412 D--RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 D RA +LSKADL T +V EF + QG +G YA L E + AIEE KP+ + VP Sbjct: 390 DAARAGLLSKADLMTNMVMEFTDTQGTMGMHYARLDGETEAVAIAIEEQYKPKFSGDTVP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T +S V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RII+ENK+ + L I Sbjct: 450 TASVSCAVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRIIVENKLPLDLVDLI 509 Query: 530 ---------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPEN-DNLLTIV 571 ++++ F R + + D+ I+ D+I A+L RP + + V Sbjct: 510 AKAQALHGTNLTNGNTSEDVLEFLMARFRSWYQDKGIQVDVILAVLARRPTRPADFDSRV 569 Query: 572 DLIKHLNEFFSSAKGEKFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + + H F + L +A KR+ ILA K E+ ++P L AEK L Sbjct: 570 NAVSH----FRGLEASTALAAANKRVSNILA---KVEGELPANVTPSLLTETAEKALAEQ 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 ++ + Y Q LL + E ++ FF+ V+V DD ++ Sbjct: 623 LASLQPKLAPLFATGDYQQALTLLAELRESVDQFFEDVMVMADDEALK 670 >gi|149019423|ref|ZP_01834785.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP23-BS72] gi|147931293|gb|EDK82272.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP23-BS72] Length = 678 Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 210/696 (30%), Positives = 346/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEIPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+A+ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFAVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMNFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|124268564|ref|YP_001022568.1| glycine--tRNA ligase [Methylibium petroleiphilum PM1] gi|124261339|gb|ABM96333.1| Glycine--tRNA ligase [Methylibium petroleiphilum PM1] Length = 705 Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 212/736 (28%), Positives = 347/736 (47%), Gaps = 73/736 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K E + L LK +G+ ++ + +P RL ++ + Sbjct: 6 NLLVELFVEELPPKALKKLGESFAQTLAESLKAQGLATEHSATTPFASPRRLAAHISAVL 65 Query: 61 PHSPEK-IEERLGP-RVG--AGKKAIDGFLR-----STGLQTISDCQIKKDPKKGDVYLA 111 P +P+K + ++L P VG A + L+ + + + D K ++ Sbjct: 66 PAAPDKAVSQKLMPVSVGLTADGQPTPALLKKLAALGADASALPRLECRPDGKAEALFFD 125 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFS---WIRPLKSILCILVA 168 L P ++ L+ + A+ K+P PK M + + ++ ++RP ++ + A Sbjct: 126 SL-VPGAMLAAGLQKALLEALAKLPIPKLMSYQLETGELPGWASVQFVRPAHGLVALHGA 184 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRN 226 + + L+ + T+GHRF A P+ +Q DHY + L+ + V+ R Sbjct: 185 DLVSVAALGLESR-----RETHGHRFEAQMDPVVLQHADHYAQQLQDQGAVIASFAARHG 239 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I AS GL ++D LL+E+ LVE V +G F++ +L +P+E + LT+K N Sbjct: 240 EIARQLQAAASKEGLVPIDDPALLDEVTALVERPNVLLGQFEESFLAVPQECLILTMKAN 299 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L + F++VSNI D +A+V GN RVV RL DA F+ +D+ Sbjct: 300 QKYFPLLDATGRLTHKFLIVSNISPEDP-SAVVGGNERVVRPRLADAKFFFDQDRR---- 354 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L+ R++ LD VV+H K+GTQGERV R+R + + I + Sbjct: 355 ----------------KTLEDRVSGLDR--VVYHGKLGTQGERVERVRAIARAIGSQLGG 396 Query: 407 DVALVDRAIV--LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + L+KADL T++V EFPELQG +G+ YA AIE+H +PR Sbjct: 397 EALAAKADQAARLAKADLLTDMVGEFPELQGTMGRYYAQHDGLGDDIAFAIEDHYRPRFA 456 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN----- 519 + +P N++ V+LADKL+TL+ + I + P+G KDP+ALRR LG+IR++ E Sbjct: 457 GDELPRNEVGTVVALADKLETLVGLFGIGQLPTGDKDPFALRRHALGVIRMLTEKALPLE 516 Query: 520 -----KIDIP-LSQFIEDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 K +P I D + L F DRL L ++ R ++A+L L + Sbjct: 517 VDALLKTALPAFGALIADPSSALAEFIFDRLAGSLREQGYRAQEVDAVLSLRPQRLGEVA 576 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQIL-----AIEEKKNREISLEISPQYLLLEAEKR 626 + + F + + + KR+ IL A+E K + + E + L Sbjct: 577 QRLAAVRAFAALPEAPALAAANKRVGNILKKVDGAVEPKVDAALLKEPAEAALAQALAAV 636 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 A + F DH Q L ++ P++ FFD V+VN DD +R NRL LL Sbjct: 637 KPAADAAFARG-----DHAASLQS---LAALKAPVDAFFDGVMVNADDPALRANRLGLLA 688 Query: 687 YIKNIILIVINVQKIV 702 + + V ++ K+ Sbjct: 689 TLHAAMNRVADLSKLA 704 >gi|322376926|ref|ZP_08051419.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M334] gi|321282733|gb|EFX59740.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M334] Length = 678 Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 205/698 (29%), Positives = 349/698 (50%), Gaps = 73/698 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + L+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMTAFLKENRLSFEAIQTFSTPRRLAVRVTDLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKE-TKIQSALSYEEDLRAQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-EHLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 +V FH KIG+ E R +I +L + A L + + RA + K DL Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF----F 538 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F + Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFNSLTY 516 Query: 539 HDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 ++ ++ ++ R D+ EA+L N + D+++ + ++K E F Sbjct: 517 ENKAEVMDFIKARVDKMMGSTPKDIKEAVLVGSN---FVVADMLEAASALVEASKEENFK 573 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 S + + + + EK E + + EK L + T + ++ Q Sbjct: 574 PSVESLSRAFNLAEKA--EGVATVDSALFENDHEKSLAEAVD---TLVLSGTASQQLKQ- 627 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L ++ I+ FF+ +V +D+ VR NRL++L ++ Sbjct: 628 ---LFALSPVIDAFFENTMVMAEDQAVRQNRLAILSHL 662 >gi|297617793|ref|YP_003702952.1| glycyl-tRNA synthetase subunit beta [Syntrophothermus lipocalidus DSM 12680] gi|297145630|gb|ADI02387.1| glycyl-tRNA synthetase, beta subunit [Syntrophothermus lipocalidus DSM 12680] Length = 688 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 208/702 (29%), Positives = 338/702 (48%), Gaps = 75/702 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D + EI +EEIPA A D+ + L + + ++R TP RL LY+ L+ + Sbjct: 4 DLVFEIGTEEIPAAYMPNAIRDMEALAREKLSGANLSFGSLRTMGTPRRLVLYVYDLAEN 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++E GP+ G A GF R+ G+ T+ +++ + D AV ++ Sbjct: 64 QAGWLKEVRGPKREQAFDAEGRPTSAALGFARAQGV-TVESLEVR-EMSGVDYVFAVKKE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +VL ++ + + +PK+MRW+ S F + RP++ +L +L E + Sbjct: 122 SGKKTVEVLPGVLREIVVDLGFPKAMRWA-----YSEFRFARPIRWMLALLGNE-----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ + N+T+GHRF + PI V +Y +E+A V++D E RR I Sbjct: 172 IPVQIENVEASNVTFGHRFLSERPITVNEAANYFELMEKAFVVVDHERRRQMIWEQILNT 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G D++LLEE+ L+E+ F G F +YL LP E++ T+ +Q+ F + Sbjct: 232 AEQAGGYPYNDEELLEEVNFLLEYPTAFYGKFSPEYLVLPTEVLTTTMIEHQRYFPVFSD 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + + GN RV+ ARLEDAL F++ D Sbjct: 292 DGKLLPGFIGVRNGDEYNL-EEVKAGNERVLRARLEDALFFYREDTK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL----- 410 +PL ++ L +VV+ A++GT +V R+ + IA I + L Sbjct: 338 -------QPLASKVELLK--NVVYQARLGTVWSKVERL----QDIAVFIGKETGLGRETT 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L KADL T +V EFPELQG +G+ YA+ E+ +AI EH PR + +P Sbjct: 385 IRRAAYLCKADLETNMVYEFPELQGIMGRYYALASGEDPEVAEAILEHYLPRFAGDRLPE 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 I VSLA+KLD L+ + IN KPSGS+DPYALRR LG++ IIL+ + + L + I Sbjct: 445 TPAGIAVSLAEKLDNLVGCFCINIKPSGSQDPYALRRQALGLVNIILKRGLRLDLEKAIR 504 Query: 530 ----------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 E +L F RL+ L D I +D+++A+L ++L + Sbjct: 505 FVYQGFAPIKPDLSCEETVGEVLDFVLQRLRGILSDSGISYDVLDAVLAVPQGDVLEVRK 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L EF S E ++ R + + ++ NR++ + L EAE+R+Y ++ Sbjct: 565 RAEALQEFKQSEYFEDGMVVFNRCYNL--AKKWDNRDVDEVL----LETEAERRVYQWLA 618 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 + E + Y + L ++ FD V++ +D Sbjct: 619 QTEPLLNELKERGEYGEYLITLSKGRAGVDELFDAVMIMAED 660 >gi|290581046|ref|YP_003485438.1| putative glycyl-tRNA synthetase subunit beta [Streptococcus mutans NN2025] gi|254997945|dbj|BAH88546.1| putative glycyl-tRNA synthetase beta subunit [Streptococcus mutans NN2025] Length = 679 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 217/720 (30%), Positives = 358/720 (49%), Gaps = 100/720 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L+ + ++ + + TP RL + + L+ Sbjct: 4 NLLVELGLEEMPAYIVKPSIKQLRQKMGQFLETNRLSFEKIEMFSTPRRLAIRVVHLADQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + E+ GP G KA GF+R GL T + I+ KG+ Y+ V + Sbjct: 64 QSDYSEDFKGPAKKIALDADGHFTKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKN 120 Query: 115 ---KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 KP + +VL ++ V +Q + +P +M W+ H+ F +IRP+ +++ +L Sbjct: 121 EAGKPAK---EVLGGLIDV-LQSLTFPVNMHWAN-HT----FEYIRPVHTLVVLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ IDL+ +I G I+ GHRF ++ S Y DL V+ D + R + I+ Sbjct: 167 DDEAIDLNFLDIKSGRISRGHRFLG-QETQIASAASYETDLRAEFVIADAKEREDMIIEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ++ + + D+ LL E++ LVE+ FMGSFD+KYL LPEE++ ++KT+Q+ FV Sbjct: 226 IRKIEKTYNVSVEIDEALLSEVLNLVEYPTAFMGSFDEKYLELPEEVLVTSMKTHQRYFV 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 R + G L FI V N G +V+GN +V+ ARLED FW+ DQ Sbjct: 286 VRDQTGKLLPNFISVRN-----GNEQFIENVVKGNEKVLLARLEDGEFFWREDQ------ 334 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ- 402 R+ D+++ V FH +IG+ E + R + + +A+ Sbjct: 335 --------------------RLQIADLVEKLKLVTFHERIGSLYEHMMRTKQIAAYLAEQ 374 Query: 403 --LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 L D + A ++RA + K DL T +V EF ELQG +G++YA L E+ + AI EH Sbjct: 375 ADLTDQEKAEIERAASIYKFDLLTGMVGEFDELQGIMGEKYATLAGESQAVATAIREHYL 434 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P +K+ +++ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ + Sbjct: 435 PISSDGQLPDSKVGAILAVADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDKFG 494 Query: 521 IDIPLSQFIED-----------QN---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 +IPL + + + QN ++ F R++ + D+ + D+ EA+L D+ Sbjct: 495 WEIPLDRLVANLYQFDFDSLTYQNQADVLAFIRGRVEKMI-DKSVPKDIREAVL----DS 549 Query: 567 LLTIVDL-IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 IV L ++ A + F S + + ++ + EK N ++ S E E+ Sbjct: 550 STHIVRLEVEAAAALAEKADEDHFKASIESLSRVFNLAEKSNHNEMVDTS--IFENEYEQ 607 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+ + + H E M D L + I+ FFD +V VDD V+ NRL+LL Sbjct: 608 ELFDAVEEL--HFTEDMTDNV-----DRLFVLSPIIDAFFDNTMVMVDDEAVKKNRLNLL 660 >gi|254797100|ref|YP_003081938.1| glycyl-tRNA synthetase, beta subunit [Neorickettsia risticii str. Illinois] gi|254590340|gb|ACT69702.1| glycyl-tRNA synthetase, beta subunit [Neorickettsia risticii str. Illinois] Length = 696 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 213/731 (29%), Positives = 347/731 (47%), Gaps = 88/731 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLEI SEEIPA +Q A + + K+ V + + + R+ + + ++ Sbjct: 1 MPKFLLEILSEEIPAALQSYAQKSFFDLFSSATKDLSV--GKIEVFTSCRRIAVLIDDVN 58 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 K ++ GP VG+ ++ F S G + S+ IK K + Y A + I Sbjct: 59 SDPVNKKVDKKGPSVGSDLSVVERFATSMG-TSASNLYIKSIGNK-EYYFAPVVGKVLCI 116 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++V++ ++ WP+SMRW + +WIRP+KSI+C+L + +I + Sbjct: 117 DEVMRQRTEDILRSFSWPRSMRWGNY-----SLNWIRPIKSIVCML-----GKSVIPVQF 166 Query: 181 KEIPCGNITYG-HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 G +T G H A IK+ S + Y L + V+L R N I +L + Sbjct: 167 HHYTAGAVTIGAHVDPALKKIKITSAEEYKSLLMKGGVVLSQFERENLIKAQISQLEAEH 226 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G + ++LL E++G+ E V MGSF + +L L E ++ I ++QK F ++ G L Sbjct: 227 GFSVCVTEELLSEVVGITESPNVLMGSFPQSFLDLHECIVETVIVSHQKVFPV-SKNGRL 285 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F++VS+I ++ A ++G RV+ ARL DA A + Sbjct: 286 LNKFVVVSSISSN----APIRGYERVITARLADA--------------------ASMVLI 321 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLS 418 D PL + +L L +FH K+G+ E+V R+R L K IA + +A + V+ A L+ Sbjct: 322 DSKTPLCELGPKLKQL--IFHKKLGSFREKVQRVRALAKFIAFWVPNASIIKVEEAAELA 379 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNE-NISCCDAIEEHLKPRGPLENVPTNKISITV 477 K DL T VR+FP+L G +G Y L E ++ DA+ +H P + P +++T+ Sbjct: 380 KLDLLTTFVRDFPKLAGFVGSHYLNLGGETDVEIIDAVRDHYLPVDAADVCPNAPVTVTL 439 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------- 529 +LADK+DTL+ ++ EK + ++DP +RRA +G++RII+ENK+D+PL F+ Sbjct: 440 ALADKIDTLVGLISVKEKVTSTRDPLGIRRAAIGVLRIIIENKLDVPLQVFLMKAIDLYP 499 Query: 530 -----------------EDQ------NLIL-FFHDRLKLYLHDRDIRHDLIEA----ILR 561 E Q N L FF +RLK L + + A I R Sbjct: 500 SSLFFSLIKKIGASSDEEKQRKDDVVNFTLSFFSERLKALLLKSGVSQAVFAAVSGGITR 559 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 P L + + ++E+ A G +F+ KR+ IL + + + S + L+L Sbjct: 560 P-----LVLTEKCIAISEWLKQADGAEFVQLHKRMMGIL---KGFSGSAKAKFSKKVLVL 611 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 E L F + ++ + + + +PI +F D VLVNV+D E+R NR Sbjct: 612 PEEVSLVQEFEVFQSLFCNALKERNFEMAFSRCADLLKPITVFMDSVLVNVEDPELRKNR 671 Query: 682 LSLLQYIKNII 692 + LL I + Sbjct: 672 IGLLLSISETL 682 >gi|292670216|ref|ZP_06603642.1| glycyl-tRNA synthetase [Selenomonas noxia ATCC 43541] gi|292648168|gb|EFF66140.1| glycyl-tRNA synthetase [Selenomonas noxia ATCC 43541] Length = 683 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 212/735 (28%), Positives = 341/735 (46%), Gaps = 92/735 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA + DL + L+++ + Y+N+R TP R L + GL+ Sbjct: 4 DLLLEIGTEEIPAHVMPHLLSDLKRLAGEQLRDQRLSYENLRTIGTPRRAALIVTGLAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G KA +GF R G+ + Q + G VY +V K Sbjct: 64 QEDVSTETRGPSVAIAFDAAGNPTKAGEGFARGQGIDPSALIQ-----RDGYVYASVHEK 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L ++P I+ +P P SMRW F +IRP++ ++ + E Sbjct: 119 GAETAR-LLTELLPELIRSIPLPNSMRWGDLD-----FRFIRPIRWLVALYGTE-----T 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + GN++ GHR AP + S Y E A +++DPE RR I Sbjct: 168 VPFMLANVTSGNMSRGHRTLAPADFIIPSPADYEAACERAHIIVDPERRRAMICEQIAET 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ G+F+++YL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGAFEERYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGA----AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N GG + GN RV+ ARL DA F+ D+ SL Sbjct: 288 DGSLLPVFITVRN-----GGKEHLDVVAHGNERVLRARLADAQFFFDEDRRK-----SLA 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 E K VVF +G+ E+ R+ L I + I D A+ Sbjct: 338 EHREKLKT-----------------VVFQQGLGSMYEKTERLMGLVTAIVEEIAPDDAVY 380 Query: 412 D-------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + RA LSKADL T +V EF ELQG +G+EYA+L E + AI+E PR Sbjct: 381 EVMSSDARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGEKPAVARAIDEQYMPRFA 440 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + +S+ADK+D ++ ++ + P+GS+DP+ALRR LG++ +++E + + Sbjct: 441 GDELPQTPLGFALSVADKIDNIVGTFSRGKIPTGSQDPFALRRQALGLVLMLIEQESGLL 500 Query: 525 LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 LS +++ ++ F RLK L +R +R+D+ EA+L + D + Sbjct: 501 LSDLVDEACDLYALDEDKREKMQADVADFIRLRLKNVLTERGVRYDVQEAVL-ADVDFVA 559 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL-EISPQYLLLEAEKRL 627 + ++ + + S R+ I + E+ + L + + + LL A Sbjct: 560 NVPVRAAYVERLLKENGADALVQSFVRVGNIARMAERTTLDTDLFQAAEEGALLSA---- 615 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y + ++++ +R S+ + I+ FFD V+V D ++ NRL+LL+ Sbjct: 616 YENAAAARAGGEDTLAAER---------SLAQAIDAFFDAVMVMDKDARIKINRLTLLKT 666 Query: 688 IKNIILIVINVQKIV 702 I + +L + KIV Sbjct: 667 IDDYLLETADYSKIV 681 >gi|315144753|gb|EFT88769.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2141] Length = 694 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 216/735 (29%), Positives = 365/735 (49%), Gaps = 89/735 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTLSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 ISFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLS 683 K LY ++D + Y + +L P I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVNDLSEAFATRTIAENYEALVNL-----RPLIDAYFNETMVMVEDEKVKQNRLK 673 Query: 684 LLQYIKNIILIVINV 698 L I + L + ++ Sbjct: 674 QLMQIAKMALSIASL 688 >gi|19703422|ref|NP_602984.1| glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25009299|sp|Q8RH44|SYGB_FUSNN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|19713496|gb|AAL94283.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 686 Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 210/729 (28%), Positives = 357/729 (48%), Gaps = 93/729 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKSNFEKKLKNNRIKFDGVRTYGTPRRLVLVADEVAGM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Y+A R Sbjct: 62 QEDLDELSIGPSRERAYKDGALTKAGEGFLKAHRIEEEQIEIIKND--KGE-YIAFKRFL 118 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E +L I+ + + + KSMRWST + RP++ L + K+ Sbjct: 119 KGKPTEAILPEILKALVLEETFQKSMRWST-----KTIRFARPIEWFLALYGG-----KV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID +++ I N + GHRF +V S+++Y++ + E V++D RR I Sbjct: 169 IDFEIEGIKSSNKSKGHRFFGKE-FEVSSVENYLKKIRENNVIIDISERRKMI------- 220 Query: 236 ASAVGLELVED------KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + L+ED K LL+E+ LVE +G+F +++L +P+E++ +++K +Q+ Sbjct: 221 EEMINNSLLEDEKADVDKALLDEVTNLVEHPFAIVGTFSEEFLEVPQEVLIISMKVHQRY 280 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F ++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 281 FPILNKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED--------- 329 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR-----VLGKKIAQLI 404 L PLD + +L VVF +GT +V R ++GK + Sbjct: 330 -----------LKIPLDNNVEKLKT--VVFQKDLGTIYNKVKRCEKIAEFLVGKLKYNYM 376 Query: 405 DADVALVDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D+ R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR Sbjct: 377 KEDIL---RTVKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPR 433 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +D Sbjct: 434 FQGDLLPSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLD 493 Query: 523 IPLSQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 I L ++ + +++ F R+ D R D+I A+L + Sbjct: 494 ISLKDLVKVSLDALEEDKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILAVLDKD 553 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +DN+ T ++++K + E S K + L KR+ I+ K N++++ I + + Sbjct: 554 SDNITTALEIVKVITEKLSKDKMQALLQVVKRVSNIM----KGNKDVT--IKEKLFKTDI 607 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK LYA + +++++ K Y + L ++ I+ +F+ V+V +D+ VRDNR+ Sbjct: 608 EKTLYAESKKVESEVEQAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIG 667 Query: 684 LLQYIKNII 692 L YI N+ Sbjct: 668 QLTYIMNLF 676 >gi|269798037|ref|YP_003311937.1| glycyl-tRNA synthetase subunit beta [Veillonella parvula DSM 2008] gi|269094666|gb|ACZ24657.1| glycyl-tRNA synthetase, beta subunit [Veillonella parvula DSM 2008] Length = 683 Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 214/732 (29%), Positives = 348/732 (47%), Gaps = 86/732 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL+ Sbjct: 4 DLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGLADT 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQT----ISDCQIKKDPKKGDVYLA 111 S E E GP G KA GF R GL + D I + K V Sbjct: 64 SAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVADLVVEDGYIYAETKTAGV--- 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 121 ----PAK---DIVTEMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWLVALL----- 163 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E +I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 164 DEDVIPVEFATVQSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQ 223 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 224 LHDMAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFP 283 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L F+ V N SD +VQ GN RV+ ARL+DA F Sbjct: 284 LVDQDGKLLPMFLTVRN--GSDHSIEVVQAGNERVLRARLDDAKFF-------------- 327 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 FN D KPL R L +VF +G ++ R+ LG+ + L + Sbjct: 328 ------FNEDRKKPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDT 379 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V +++RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + Sbjct: 380 VVVLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRFAGDV 439 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 440 LPQTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRP 499 Query: 528 FI-----------EDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E Q +L FF RLK DR++ H +I+ +L ++N L++ Sbjct: 500 IFKASMELLNVPAEKQEELLGQVEEFFTLRLKNIFLDREVPHHVIDLLL---SNNELSVA 556 Query: 572 DLIKHLNEFFSSAKGEKFLL--SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 D +N ++ E L + R++ ++ K+ E + ++ L +AEK L+ Sbjct: 557 DAEGLVNALLANRIDENVELVQAYTRMYNLV-----KDVEYT-GVNSDLLKEDAEKELFE 610 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 S + + Y + + ++ I FF+ V+V D ++ NRL L++ Sbjct: 611 AASKASEASSAAWEAGDYDAVVAVPATLVPAINKFFEDVMVMDKDEAIKANRLQLVRLAY 670 Query: 690 NIILIVINVQKI 701 +++ I+ ++ + Sbjct: 671 SVMAIIGDISSL 682 >gi|290473327|ref|YP_003466193.1| glycine tRNA synthetase subunit beta [Xenorhabdus bovienii SS-2004] gi|289172626|emb|CBJ79395.1| glycine tRNA synthetase, beta subunit [Xenorhabdus bovienii SS-2004] Length = 689 Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 211/724 (29%), Positives = 340/724 (46%), Gaps = 73/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + LK + + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFEAELKNANLGHGEISWFAAPRRLALKVANLAVAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERMVTD--KGEWLLYRAQVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +++L +V ++ K+P PK MRW + ++RP+ ++ +L ++ +I Sbjct: 124 GREAKELLADMVSSSLGKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSD-----VI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 D ++ I I GHRF + + + Y L+E V+ D R+ I DA + Sbjct: 174 DGEILGIKSDRIIRGHRFMGEAEFAIDNAEQYPTILQERGRVIADYYARKALIKRDAEQA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 234 AMQLGGVADLTDSLLEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 294 SGKLMANFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 340 -------QRLEDNLLRLET--VLFQKQLGTLRDKTDRIQALAGWIAEKIGADVTHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ +S Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYQPRFSGDELPSTAVSC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L E+ Sbjct: 451 AVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLQTLAEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPEN----DNLLTIVDLI 574 +++ F R + + ++ D I+A+L RP D + V Sbjct: 511 YGDKLTNENVVDDVVEFMLGRFRTWYQEQGYSVDAIQAVLARRPTQPADFDARMKAVTHF 570 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+E S A KR+ ILA E+K + L L E +L + Sbjct: 571 RTLDEAVSLAAAN------KRVSNILAKSEEKLNDCVL---ASVLKAAEEIQLATHLVVL 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y L S+ E ++ FFD V+V +D++VR NRL+LL ++ + L Sbjct: 622 KDKLAPLFAEGNYQDALVELASLREVVDAFFDNVMVMDEDQQVRINRLTLLSELRELFLR 681 Query: 695 VINV 698 V ++ Sbjct: 682 VADI 685 >gi|257416645|ref|ZP_05593639.1| glycyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257421951|ref|ZP_05598941.1| glycyl-tRNA synthetase subunit beta [Enterococcus faecalis X98] gi|257158473|gb|EEU88433.1| glycyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|257163775|gb|EEU93735.1| glycyl-tRNA synthetase subunit beta [Enterococcus faecalis X98] gi|315155340|gb|EFT99356.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0043] Length = 694 Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 216/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + E+ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLEVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|256763100|ref|ZP_05503680.1| glycyl-tRNA synthetase [Enterococcus faecalis T3] gi|256684351|gb|EEU24046.1| glycyl-tRNA synthetase [Enterococcus faecalis T3] gi|315173670|gb|EFU17687.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1346] Length = 694 Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 368/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|312899836|ref|ZP_07759155.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0470] gi|311293086|gb|EFQ71642.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0470] Length = 694 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 368/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKSWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|257082015|ref|ZP_05576376.1| glycyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256990045|gb|EEU77347.1| glycyl-tRNA synthetase [Enterococcus faecalis E1Sol] Length = 694 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 368/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDN-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|37222167|gb|AAP70370.1| GlyS [uncultured bacterium] Length = 692 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 205/723 (28%), Positives = 348/723 (48%), Gaps = 61/723 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + + LK + + ++ + P RL + ++ L+ Sbjct: 4 DFLVELGTEELPPKALKNLMTSFAETIEANLKAAELSFTAIKPFAAPRRLAVLVENLASE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +P K GP + G KA F G+ S+ + + D K + + + Sbjct: 64 TPAKELVVWGPPAAIAFDKEGQPTKAALAFAEKNGIAA-SELKAESDGKAEKLVARITTE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ + D+L+ +V A+ K+P K M+W ++RP+ L +L D + Sbjct: 123 GKKTV-DLLEAVVTDALAKLPIAKRMKWGAKRE-----EFVRPVH-WLVMLFGSD----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ + + G T GHRFH + I + Y L+ V+ D R I Sbjct: 172 INASVLGLTAGRTTRGHRFHYNNTIDLAKAGDYASVLKNTGFVVADFTERGATIKQQVEA 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG V D +LL+E+ LVEW G F++++L +P E + ++K +QK F Sbjct: 232 EAKKVGGVAVIDANLLDEVTSLVEWPVALTGKFEERFLAVPSEALIASMKEHQKYFHVVD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V+NIQ+ D + I+ GN RV+ RL DA F++ D+ L+SL+E Sbjct: 292 TNGKLKNNFITVANIQSKDP-SQIIDGNERVIRPRLSDAAFFFETDKKT--TLASLRE-- 346 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 RL +VF A++GT ++ R+ L K IA ++AD A +RA Sbjct: 347 ----------------RLKT--IVFQAQLGTIYDKTERVAGLAKLIAGKLNADAASAERA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L K+DL T +V EF ++QG G YAV EN A+ E PR + +P Sbjct: 389 AQLCKSDLVTNMVGEFDDMQGIAGYYYAVNDGENAEVAAAMNEQYMPRFAGDQLPATTTG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---QFIED 531 ++LAD+LDT+ + I ++P+GSKDP+ALRRA++ ++RI++E + + L F ++ Sbjct: 449 AIIALADRLDTISGIFGIGQQPTGSKDPFALRRASIAVLRILVEKNLALDLRDLLTFAKN 508 Query: 532 QN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 Q+ ++ + +R + + D +I ++ +++ + L I + +NE Sbjct: 509 QHKNLTVGDELVEQVLAYMLERFRAFFEDANIPAEVFQSVTAKQLSQPLDINQRVLAVNE 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K+N S E++ L +AEK L +S + Sbjct: 569 FSKLPQALALAAANKRVSNILA---KQNAAPSTEVNAALLQEDAEKILAQAVSAKAAVVA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L + +P++ FFD V+V DD ++ NRL+LLQ ++ + L V ++ Sbjct: 626 PLFAAREYTKALAALADLQQPVDAFFDSVMVMSDDPALQQNRLALLQQLRGLFLEVADIS 685 Query: 700 KIV 702 +V Sbjct: 686 YLV 688 >gi|229549421|ref|ZP_04438146.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis ATCC 29200] gi|255972125|ref|ZP_05422711.1| glycyl-tRNA synthetase [Enterococcus faecalis T1] gi|300860883|ref|ZP_07106970.1| glycine--tRNA ligase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|307277160|ref|ZP_07558264.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2134] gi|312953486|ref|ZP_07772326.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0102] gi|229305658|gb|EEN71654.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis ATCC 29200] gi|255963143|gb|EET95619.1| glycyl-tRNA synthetase [Enterococcus faecalis T1] gi|295113460|emb|CBL32097.1| glycyl-tRNA synthetase beta chain [Enterococcus sp. 7L76] gi|300849922|gb|EFK77672.1| glycine--tRNA ligase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|306506090|gb|EFM75256.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2134] gi|310628695|gb|EFQ11978.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0102] gi|315146682|gb|EFT90698.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4244] gi|315152153|gb|EFT96169.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0031] gi|315159084|gb|EFU03101.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0312] Length = 694 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 368/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|42519243|ref|NP_965173.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] gi|81832210|sp|Q74IZ2|SYGB_LACJO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|41583531|gb|AAS09139.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] Length = 690 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 212/734 (28%), Positives = 356/734 (48%), Gaps = 83/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF+R G+ T I + KG Y V ++ Sbjct: 64 QEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 121 KEGKKASDILMGMSDI-VKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLGDSVV-LANADDYEEALKSQYVIANADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFISVRN-GNSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + D ++ Sbjct: 335 -------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDTEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L EN + AI+E P ++P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGENENVSVAIKESYMPTSAEGDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ + Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLPE 505 Query: 530 -----------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E +N I F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N +I +E+ LYA + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRNAN---DIDESLFQDVSEEELYAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++E+ D I DL E I +F+ ++ D +V++NRL+ L + Sbjct: 623 N----ALEENTD----LSIADLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKV 674 Query: 689 KNIILIVINVQKIV 702 N+ + ++ K+V Sbjct: 675 NNLADRMGDLSKLV 688 >gi|307290542|ref|ZP_07570454.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0411] gi|306498397|gb|EFM67902.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0411] Length = 694 Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 216/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+KI L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKIG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|258626089|ref|ZP_05720940.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM603] gi|258581615|gb|EEW06513.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM603] Length = 688 Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 206/720 (28%), Positives = 340/720 (47%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + I GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVKSDRIVRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAKQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DANKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLTRNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|168486171|ref|ZP_02710679.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1087-00] gi|183570718|gb|EDT91246.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1087-00] Length = 678 Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 347/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMVAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y +L + V+ DP R I++ ++ + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEENLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|296328736|ref|ZP_06871250.1| glycyl-tRNA synthetase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154071|gb|EFG94875.1| glycyl-tRNA synthetase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 686 Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 210/729 (28%), Positives = 356/729 (48%), Gaps = 93/729 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKSNFEKKLKNNRIKFDGVRTYGTPRRLVLVADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Y+A R Sbjct: 62 QEDLDELSIGPSRERAYKDGALTKAGEGFLKAHRIEEEQIEIIKND--KGE-YIAFKRFL 118 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E +L I+ + + + KSMRWST + RP++ L + K+ Sbjct: 119 KGKPTEAILPEILKALVLEETFQKSMRWST-----KTIRFARPIEWFLALYGG-----KV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID +++ I N + GHRF +V S+++Y++ + E V++D RR I Sbjct: 169 IDFEIEGIKSSNKSKGHRFFGKE-FEVSSVENYLKKIRENNVIIDISERRKMI------- 220 Query: 236 ASAVGLELVED------KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + L+ED K LL+E+ LVE +G+F +++L +P+E++ +++K +Q+ Sbjct: 221 EEMINNSLLEDEKADVDKALLDEVTNLVEHPFAIVGTFSEEFLEVPQEVLIISMKVHQRY 280 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F ++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 281 FPILNKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED--------- 329 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR-----VLGKKIAQLI 404 L PLD + +L VVF +GT +V R ++GK + Sbjct: 330 -----------LKIPLDNNVEKLKT--VVFQKDLGTIYNKVKRCEKIAEFLVGKLKYNYM 376 Query: 405 DADVALVDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D+ R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR Sbjct: 377 KEDIL---RTVKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPR 433 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +D Sbjct: 434 FQGDLLPSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLD 493 Query: 523 IPLSQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 I L ++ + +++ F R+ D R D I A+L + Sbjct: 494 ISLKDLVKVSLDALEEDKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDAILAVLDKD 553 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +DN+ T ++++K + E S K + L KR+ I+ K N++++ I + + Sbjct: 554 SDNITTALEIVKVITEKLSKDKMQALLQVVKRVSNIM----KGNKDVT--IKEKLFKTDI 607 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK LYA + +++++ K Y + L ++ I+ +F+ V+V +D+ VRDNR+ Sbjct: 608 EKTLYAESKKVESEVEQAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIG 667 Query: 684 LLQYIKNII 692 L YI N+ Sbjct: 668 QLTYIMNLF 676 >gi|237756328|ref|ZP_04584880.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] gi|237691514|gb|EEP60570.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] Length = 678 Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 209/719 (29%), Positives = 359/719 (49%), Gaps = 60/719 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY---QNMRQYWTPHRLFLYLK 57 M +LLEI EE+P + E L + K+ IY +N++ Y TP RL + +K Sbjct: 1 MKSYLLEIGCEELPPKAILTYKEFLKEYVSQTFKD-FFIYNSPENIKIYVTPRRLAVLIK 59 Query: 58 GLSPHSPEKIEERLGPRVGAGKKAID--GFLRSTGLQTISDCQI------KKDPKKGDVY 109 L + +GP K AID G L I K +KG+ Sbjct: 60 NLKERQDNQKITLIGP---PYKVAIDSEGKFTKAALSFAEKNNIPLEKLEKITTEKGEYL 116 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A + K +E +K P + P KSM+W+ S + + RP++ I+ +L Sbjct: 117 GATIEKEGESLESFIKHNTPQLFNQFPQLKSMKWND-----SDYRFPRPIRWIVSLL--- 168 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLD-HYIRDLEE----AMVLLDPECR 224 +K+ID ++ + TY HRF + + D ++ D EE ++ + E R Sbjct: 169 --DDKVIDFEVASVKADRFTYLHRFMTKPIGRGERKDINHANDYEEITKLGYIIANFEDR 226 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 +++I A + ++ED +L++EI L E+ +G +YL LP+E I +T+ Sbjct: 227 KHSIKTQYEGFARQLNASIIEDDELIDEITCLTEFPVGIVGDLSPEYLTLPKEAI-ITVC 285 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + + ++ ++G L F+ SN D + G +V+ ARLEDAL F+K D Sbjct: 286 KHHQRYLNFEKDGKLIPKFLAFSNNAVKDRDV-VKNGYEKVLRARLEDALFFYKED---- 340 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 L K LD + +L + FH K+G+ ++V R L K+A LI Sbjct: 341 ----------------LKKKLDDNIEKLK--GIQFHEKLGSMYDKVLRNLELALKLADLI 382 Query: 405 D-ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 DV + RA++LSKADL TE+V+EF ELQG +G Y+ Q E +I EH P+ Sbjct: 383 GYKDVEKIKRAVMLSKADLLTEMVKEFDELQGIMGMYYSQKQGEEEEISRSIYEHYLPKT 442 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +N+P + ++LADKLDT+I+F I E P S DP+ +RR +GI+R+++E +ID+ Sbjct: 443 AEDNIPETNLGTLLALADKLDTVISFIKIGELPKPSADPFGIRRNAIGIVRLLVEKEIDL 502 Query: 524 PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L + I+D++++ F RL+ YL + + D+I A+L ++ N+ +K L++ + Sbjct: 503 DLRKVIDDESILDFILSRLESYLQSKGYKTDIINAVLSLKDGNIYRNYLKVKALSQLRNL 562 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 E ++ KR+ I+ E+ ++ + + + L+ E EK LY + ++ ++ Sbjct: 563 PDYENVIMVFKRVGNIIP-EDFRSSNVDVNL----LVSEPEKELYKKFIEIKDKFKQFIE 617 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +K Y + L+ + I+ FFD V++ V+D ++++NRLSLL+ I ++ + + K++ Sbjct: 618 NKDYDKALGLMLELKPYIDRFFDNVMIMVEDEKLKNNRLSLLKEINDLFRNIADFTKLI 676 >gi|255019756|ref|ZP_05291833.1| Glycyl-tRNA synthetase beta chain [Acidithiobacillus caldus ATCC 51756] gi|254970824|gb|EET28309.1| Glycyl-tRNA synthetase beta chain [Acidithiobacillus caldus ATCC 51756] Length = 695 Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 214/721 (29%), Positives = 330/721 (45%), Gaps = 65/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA+ Q + + I GLL E G+ + + + P RL L ++ L+ Sbjct: 6 DLLLEIGCEELPAQEQPRLLQAAPEIFQGLLDEAGIAFGVVHGFVGPRRLALLVEDLALE 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E R GP + G A GF RS G+ + ++ D KG V + Sbjct: 66 TQAREEWRRGPSLDRAFTADGQPSAAALGFARSCGVAPDALEELATD--KGPVLAFRVVT 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L I +Q +P K MRW S RP++ ++ L ++ + Sbjct: 124 PAQSSARLLPGIAQRWLQTLPLRKRMRWGERDDRFS-----RPVRWLVLRLGSQVLPWQS 178 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 L+ G + GHR H P + + L Y L EA V D RR IL + L Sbjct: 179 FGLE-----AGAASRGHRVHHPEAVPLPVLRDYPTLLREAKVRADWHERRQHILRELSCL 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + D L +EI GL EW GSFD YL +PE ++R + +Q+ R Sbjct: 234 AEKLGAQALLDDALADEITGLNEWPVALAGSFDPDYLRVPEAVLRTVMVQHQRYVPLRGG 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G LA ++ ++NI + D +V+GN RV+ ARL DA FW +D+ Sbjct: 294 DGRLAPHYLFIANIASRDP-QVVVRGNDRVLRARLADAAFFWDQDRR------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L R+ LD L +F +G+ E+ R+ L + +A D A Sbjct: 340 -------RSLASRLPELDAL--LFQDGLGSMAEKSHRLEALARSLAVAFGLDPRAAAHAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L KADL T +V EFPELQG +G YA E+ + AI E +P G + +P + + Sbjct: 391 RLCKADLLTGMVGEFPELQGIMGGHYARHDGEDEAIATAIAEQYRPAGRDDPLPESPLGR 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 ++LADK DTL F+AI + PSG +DP+ LRRA LGI+RI LE + L Q + Sbjct: 451 ILALADKADTLWGFFAIGQIPSGDRDPFGLRRAALGILRIALEGS-GLSLRQLLRAAADG 509 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F +RL++ L D D I+A+L D+ + ++ L Sbjct: 510 YGASLHLADPEAVTESAWAFVQERLRVLLRDEGFAADQIQAVLAVAGDDPIAARRRLESL 569 Query: 578 NEFFSSAKGEKFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 EF + L + KRI +L E+ + + +P L AE L+ S Sbjct: 570 AEFLRLHESADALAALIKRINNLLRKEDLGSLP---QCNPDRLQEPAEIALWREYSALQE 626 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + DLL + ++ FF ++LV +D +R NRL+LL I+ L + Sbjct: 627 ALIPLLAAGDFAASLDLLAGLRSAVDRFFQEILVLCEDARLRANRLALLAQIQKSFLQIA 686 Query: 697 N 697 + Sbjct: 687 D 687 >gi|332073812|gb|EGI84290.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA41301] Length = 678 Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 346/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ ++ + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLI 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|296134526|ref|YP_003641768.1| glycyl-tRNA synthetase, beta subunit [Thiomonas intermedia K12] gi|295794648|gb|ADG29438.1| glycyl-tRNA synthetase, beta subunit [Thiomonas intermedia K12] Length = 721 Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 186/609 (30%), Positives = 309/609 (50%), Gaps = 54/609 (8%) Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + L+ + AI K+P PK M + + ++RP ++ + A+ + Sbjct: 144 PGASLAEGLQKALAEAIAKLPIPKVMAYQLEDG-WTTVKFVRPAHGLVALHGAD-----V 197 Query: 176 IDLDLKEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 + + + G T+GHRF A PI +++ D Y L E+ V+ + RR I Sbjct: 198 VPVQALGLTAGRETHGHRFEAQADPIVLRNADSYADQLREQGAVIASFDARRAEIAAQLQ 257 Query: 234 RLA--SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + GL ++D LL+E+ LVE V + FD +L +P+E + LT+K NQK F Sbjct: 258 ATARQAGPGLHPIDDAALLDEVTALVERPNVLLCQFDPAFLAVPQECLILTMKANQKYFP 317 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L + F++VSNI +D +A+++GN RVV RL DA F+++D+ Sbjct: 318 LLDAAGKLTHRFLVVSNISPADP-SAVIEGNERVVRPRLADAQFFFEQDRK--------- 367 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VA 409 K L+ R+ LD VV+HAK+G+QGER+ R++ L IA+ I V Sbjct: 368 -----------KRLEDRVPGLD--KVVYHAKLGSQGERMRRVQALAGGIARQISPSFPVE 414 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +RA +L+K DL T++V EFPELQG +G+ YA E+ +AIE+H KPR + +P Sbjct: 415 QAERAALLAKTDLLTDMVGEFPELQGFMGRYYAAHDGEDAWVAEAIEDHYKPRFSGDVLP 474 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LADK +TL+ + I E+P+G KDP+ALRR LGI+R+++E I LS+++ Sbjct: 475 RSDVGFALALADKTETLVGLFGIGERPTGDKDPFALRRHALGILRMLMERGQGIELSRYL 534 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 E+ ++ F +DRL L ++ ++A+L L + + Sbjct: 535 ENAVPVFSGVAGFSDPSADVQTFLYDRLANLLREQGWTAQEVDAVLALSPQILADVPRRL 594 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISD 633 + + F + + + KR+ IL E LL+E AE L ++ Sbjct: 595 EAVRAFAALPEAAALAAANKRVGNILRKSEGAKHGSGFNAD---LLVEPAEIALSQALNA 651 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q+ Y +L ++ EP++ FFDQV+VN +D +R NRL+LL ++ + Sbjct: 652 VAPQVQQLYAAGDYTAALKMLAALKEPVDTFFDQVMVNAEDPALRVNRLALLARLQEAMN 711 Query: 694 IVINVQKIV 702 V ++ ++ Sbjct: 712 QVADLSRLA 720 >gi|46580306|ref|YP_011114.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio vulgaris str. Hildenborough] gi|81830422|sp|Q72AU3|SYGB_DESVH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|46449723|gb|AAS96373.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris str. Hildenborough] gi|311233711|gb|ADP86565.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris RCH1] Length = 696 Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 219/719 (30%), Positives = 343/719 (47%), Gaps = 69/719 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+PAR +L+ L + G+ +R TP R + + ++ Sbjct: 1 MSQFVLEIGTEELPARFLPALERELAERFTRALADAGIECDPVRVMSTPRRAVVRMDAVN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E E GP G KA +GF R+ G++ ++ D KG+ Y+AV Sbjct: 61 PVQSESEEVVTGPPARIAFTPEGGLTKAAEGFARTQGVEVADIFRLTTD--KGE-YIAVR 117 Query: 114 R--KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R I D+L+ I P I +P+PK MRW + F++ RP++ +L + Sbjct: 118 KHMGGARSI-DLLRDICPAIIGALPFPKRMRWGSGD-----FTYARPMRWLLALF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILN 230 E ++D ++ + GNITYGHR H P+ V Y R + E+ V E RRNA++ Sbjct: 167 DESVVDFEVGGVRSGNITYGHRIHGAGPLTVARAGDYERVIREQGGVTPVGEERRNAVVK 226 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + LA A G +++ LL+E+ GLVE +G+ D +L LP E++ +++++QK F Sbjct: 227 GGNALAVAAGGKVIWKDSLLDEVQGLVEHPVPCLGNIDPSFLELPREVLLTSMESHQKSF 286 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 EG L F+ V N+ DG + +G RV+ ARLEDA FWK Sbjct: 287 GVEDAEGRLMPHFLTVLNLTPLDG-DLVRKGWERVLRARLEDARFFWK------------ 333 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 DL+ D +A LD +V+F +G+ G++ R+ L +A + D A Sbjct: 334 --------TDLASSFDAWLASLD--NVIFLGPLGSMGDKTRRLEQLCAWLAAEVGFDDAT 383 Query: 411 VD-RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSK DL + +V EF LQG +G YA E + AI E P GP VP Sbjct: 384 AAARAGRLSKGDLVSGMVGEFDTLQGIMGGIYARRMGEAEAVAAAIAEQYLPAGPDSPVP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 ++ +S+ADK DTL + + P+G+ DPYALRR LGI RIILE+ + + + Sbjct: 444 SSMCGALLSIADKADTLAGCFGLGMIPTGAADPYALRRCVLGIARIILEHGLQLDVRGLF 503 Query: 530 ----------------EDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED + L FF RL+ L+EA+L D++ + Sbjct: 504 AKAFALYGERAWKLAPEDALVKLDEFFMARLRNLFIANGYETLLVEAVLAAGCDDVRSAG 563 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL--EAEKRLYA 629 ++ L F +L+ KR I+ ++ + +++L+ + + LL +AE++L A Sbjct: 564 ARLEALAAFSRRDDFASAVLTFKRAANIIR-KQGGDSDVALDGAWKADLLVEDAERQLAA 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + Y + LL + ++ FF+ V+V DD +R NRL+LLQ + Sbjct: 623 SLEAMFPRFDGLWAEGDYPALFGLLGELRPVVDGFFEGVMVMSDDAALRTNRLNLLQAL 681 >gi|260774575|ref|ZP_05883488.1| glycyl-tRNA synthetase beta chain [Vibrio metschnikovii CIP 69.14] gi|260610481|gb|EEX35687.1| glycyl-tRNA synthetase beta chain [Vibrio metschnikovii CIP 69.14] Length = 688 Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 205/719 (28%), Positives = 337/719 (46%), Gaps = 62/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + + ++ + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFSTELAAAELTHDGIKWFATPRRLALKVANLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K + +G+ L Sbjct: 64 QADKVLEKRGPAVSVAFDAQGNPTKAAQGWARGNGITVEQADRLKTE--QGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ +P K MRW + +IRP+K++ +L +++ Sbjct: 122 KGQAAKAIVVELAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILL-----GDEL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ID ++ + GHRF + S Y LE+ V+ D E R+ I+ A + Sbjct: 172 IDGEILGVASARTIRGHRFMGEKEFTIDSAQQYPDILEQRGKVIADYETRKATIIAGAQQ 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG D DL+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQVGGIAELDDDLVEEVTALVEWPVVLTAKFEEKFLNVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI V+NI++ + +++GN +VV RL DA F Sbjct: 292 ANKQLLPNFIFVTNIESKEP-RHVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL L R+ +L+ +F K+GT ++ RI L IA+ I ADVA RA Sbjct: 333 --FNTDLKSKLIDRLPQLET--AIFQQKLGTIKDKTDRITELAGYIAEQIGADVAQAKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E + A+ E PR + +PT+ +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEPEAVALAMNEQYMPRFAGDQLPTDGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 +++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E + L + Sbjct: 449 SALAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYKLDLVDLVAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDRLTNQAVEHDVIEFMLGRFRAWYQDEGFSVDVIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K ++ E+ L AEK L ++ ++ Sbjct: 568 FRELEAAEALAAANKRVGNILA---KFAGQLPAEVDLALLQEPAEKALGQDVAVMSEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y Q L S+ EP++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 625 PVFASGDYQQALSQLASLREPVDAFFDNVMVMADDEALKQNRLTLLNDLRNLFLQIADI 683 >gi|303255015|ref|ZP_07341092.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS455] gi|303259074|ref|ZP_07345053.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP-BS293] gi|303261754|ref|ZP_07347701.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS292] gi|303264427|ref|ZP_07350347.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS397] gi|303266741|ref|ZP_07352623.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS457] gi|303269166|ref|ZP_07354944.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS458] gi|301802205|emb|CBW34951.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae INV200] gi|302598022|gb|EFL65091.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS455] gi|302637334|gb|EFL67822.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS292] gi|302640017|gb|EFL70473.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP-BS293] gi|302641290|gb|EFL71659.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS458] gi|302643730|gb|EFL73995.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS457] gi|302646239|gb|EFL76466.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS397] Length = 678 Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 346/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEIPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMNFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|22127958|ref|NP_671381.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis KIM 10] gi|45443705|ref|NP_995244.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|51598201|ref|YP_072392.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis IP 32953] gi|108809003|ref|YP_652919.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Antiqua] gi|108813877|ref|YP_649644.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Nepal516] gi|145597347|ref|YP_001161422.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Pestoides F] gi|150260990|ref|ZP_01917718.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis CA88-4125] gi|153949017|ref|YP_001403073.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis IP 31758] gi|162420121|ref|YP_001608092.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Angola] gi|165926203|ref|ZP_02222035.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165936828|ref|ZP_02225394.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166009645|ref|ZP_02230543.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213303|ref|ZP_02239338.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167398625|ref|ZP_02304149.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420827|ref|ZP_02312580.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425595|ref|ZP_02317348.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467917|ref|ZP_02332621.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis FV-1] gi|170022285|ref|YP_001718790.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis YPIII] gi|186897425|ref|YP_001874537.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis PB1/+] gi|218931052|ref|YP_002348927.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis CO92] gi|229839779|ref|ZP_04459938.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841863|ref|ZP_04462019.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229896741|ref|ZP_04511905.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Pestoides A] gi|229904400|ref|ZP_04519511.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Nepal516] gi|270488339|ref|ZP_06205413.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis KIM D27] gi|294505601|ref|YP_003569663.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Z176003] gi|25009332|sp|Q8Z9W7|SYGB_YERPE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81825680|sp|Q663V8|SYGB_YERPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|122979893|sp|Q1CD86|SYGB_YERPN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123372145|sp|Q1C3J8|SYGB_YERPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166227933|sp|A4TGN7|SYGB_YERPP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166980042|sp|A7FP95|SYGB_YERP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238687308|sp|A9R4F9|SYGB_YERPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238688395|sp|B1JH07|SYGB_YERPY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238691425|sp|B2K7F8|SYGB_YERPB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|21961101|gb|AAM87632.1|AE014010_8 glycine tRNA synthetase, beta subunit [Yersinia pestis KIM 10] gi|45438575|gb|AAS64121.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis biovar Microtus str. 91001] gi|51591483|emb|CAH23154.1| glycyl-tRNA synthetase beta subunit [Yersinia pseudotuberculosis IP 32953] gi|108777525|gb|ABG20044.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Nepal516] gi|108780916|gb|ABG14974.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Antiqua] gi|115349663|emb|CAL22643.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis CO92] gi|145209043|gb|ABP38450.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Pestoides F] gi|149290398|gb|EDM40475.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis CA88-4125] gi|152960512|gb|ABS47973.1| glycyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis IP 31758] gi|162352936|gb|ABX86884.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis Angola] gi|165915070|gb|EDR33681.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922063|gb|EDR39240.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165991567|gb|EDR43868.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205601|gb|EDR50081.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960956|gb|EDR56977.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051129|gb|EDR62537.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055609|gb|EDR65402.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169748819|gb|ACA66337.1| glycyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis YPIII] gi|186700451|gb|ACC91080.1| glycyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis PB1/+] gi|229678518|gb|EEO74623.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Nepal516] gi|229691202|gb|EEO83255.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229696145|gb|EEO86192.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700280|gb|EEO88315.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Pestoides A] gi|262363765|gb|ACY60486.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis D106004] gi|262367701|gb|ACY64258.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis D182038] gi|270336843|gb|EFA47620.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis KIM D27] gi|294356060|gb|ADE66401.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Z176003] gi|320017401|gb|ADW00973.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 689 Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 205/719 (28%), Positives = 333/719 (46%), Gaps = 63/719 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNANLSHGEVSWYAAPRRLAVKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA-VLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A V + Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTDKGEWLLYRAHVKGQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L+ L +V A+ K+P PK MRW + ++RP+ ++ +L E + Sbjct: 126 PAQLL---LAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGTE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + S D Y + L E V+ D E R++ I DA + Sbjct: 173 IPGTVLGINSDRVIRGHRFMGEAEFTIDSADQYPQILLERGKVIADYELRKSIIKRDAEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQQIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 TAGHLMPHFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLSLDLQTLTEEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNAKVVDDVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVHASILKEPAELKLATHLVVLRDQLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYKEALVELAALRETVDEFFESVMVMAEDDAVRVNRLTLLSKLRELFLQVADI 685 >gi|238754024|ref|ZP_04615383.1| Glycyl-tRNA synthetase beta subunit [Yersinia ruckeri ATCC 29473] gi|238707776|gb|EEQ00135.1| Glycyl-tRNA synthetase beta subunit [Yersinia ruckeri ATCC 29473] Length = 689 Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 202/724 (27%), Positives = 336/724 (46%), Gaps = 73/724 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + + L + + ++ + P RL + + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANITAELDSANLSHGDVSWFAAPRRLAVKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA-VLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ + Sbjct: 66 ADREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVDQAERLATDKGEWLLYRAHIIGQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L+ L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 126 SAQLL---LAGMVSTALSKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + S + Y + L E V+ D E R++ I DA Sbjct: 173 IPGTVLGIHSNRVIRGHRFMGEAEFTIDSAEQYPQILLERGKVIADYELRKSIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSS 349 G L FI V+NI++ D I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 293 AAGNLMPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET 351 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 V+F ++GT ++ RI+ L +A+ I ADV Sbjct: 352 ---------------------------VLFQQQLGTLRDKTDRIQALAGWVAEQIGADVN 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +N+P Sbjct: 385 HATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDNLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +N ++ +++ADK+DTL + I + P G KDP+ALRRA+LG++RII+E + + L Sbjct: 445 SNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRASLGVLRIIVEKNLPLDLQTLT 504 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 E+ ++ F R + + + D I+A+L + Sbjct: 505 EEAVRLYGSKLTNGKVVDEVVEFMLGRFRAWYQEEGHSVDTIQAVLARRPTKPADFDARV 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++ F + + KR+ ILA K ++ ++ L AE +L + Sbjct: 565 KAVSHFRTLDAAAALAAANKRVSNILA---KSTDTLNDRVNAAVLKDSAELQLATHLVVL 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + RY + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L Sbjct: 622 RDQLTPLFAEGRYQEALVELATLRENVDAFFDNVMVMAEDDAVRINRLTLLSKLRELFLQ 681 Query: 695 VINV 698 V ++ Sbjct: 682 VADI 685 >gi|24378935|ref|NP_720890.1| glycyl-tRNA synthetase subunit beta [Streptococcus mutans UA159] gi|81844378|sp|Q8CWY5|SYGB_STRMU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24376820|gb|AAN58196.1|AE014890_9 putative glycyl-tRNA synthetase (beta subunit) [Streptococcus mutans UA159] Length = 679 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 216/720 (30%), Positives = 357/720 (49%), Gaps = 100/720 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ EE+PA + + + L + L+ + ++ + + TP RL + + L+ Sbjct: 4 NLLVELGLEEMPAYVVKPSIKQLRQKMGQFLETNRLSFEKIEMFSTPRRLAIRVVHLADQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + E+ GP G KA GF+R GL T + I+ KG+ Y+ V + Sbjct: 64 QSDYSEDFKGPAKKIALDADGHFTKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKN 120 Query: 115 ---KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 KP + +VL ++ V +Q + +P +M W+ H+ F +IRP+ +++ +L Sbjct: 121 EAGKPAK---EVLGGLIDV-LQSLTFPVNMHWAN-HT----FEYIRPVHTLVVLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ +DL+ +I G I+ GHRF ++ S Y DL V+ D + R + I+ Sbjct: 167 DDEALDLNFLDIKSGRISRGHRFLG-QETQIASAASYETDLRAEFVIADAKEREDMIIEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + + D+ LL E++ LVE+ FMGSFD+KYL LPEE++ ++KT+Q+ FV Sbjct: 226 IREIEKTYNVSVEIDEALLSEVLNLVEYPTAFMGSFDEKYLELPEEVLVTSMKTHQRYFV 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 R + G L FI V N G +V+GN +V+ ARLED FW+ DQ Sbjct: 286 VRDQTGKLLPNFISVRN-----GNEQFIENVVKGNEKVLLARLEDGEFFWREDQ------ 334 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLD----VVFHAKIGTQGERVSRIRVLGKKIAQ- 402 R+ D+++ V FH KIG+ E + R + + +A+ Sbjct: 335 --------------------RLQIADLVEKLKLVTFHEKIGSLYEHMMRTKQIAAYLAEQ 374 Query: 403 --LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 L D + A ++RA + K DL T +V EF ELQG +G++YA L E+ + A+ EH Sbjct: 375 ADLTDQEKAEIERAASIYKFDLLTGMVGEFDELQGIMGEKYATLAGESQAVATAVREHYL 434 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P +K+ +++ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ + Sbjct: 435 PISSDGQLPDSKVGAILAVADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDKFG 494 Query: 521 IDIPLSQFIED-----------QN---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 +IPL + + + QN ++ F R++ + D+ + D+ EA+L D+ Sbjct: 495 WEIPLDRLVANLYQFDFDSLTYQNQADVLAFIRGRVEKMI-DKSVPKDIREAVL----DS 549 Query: 567 LLTIVDL-IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 IV L ++ A + F S + + ++ + EK N ++ S E E+ Sbjct: 550 STHIVRLEVEAAAALAEKADEDHFKASIESLSRVFNLAEKSNHNEMVDTS--IFENEYEQ 607 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+ + + H E M D L + I+ FFD +V VDD V+ NRL+LL Sbjct: 608 ELFDAVEEL--HFTEDMTDNV-----DRLFVLSPIIDAFFDNTMVMVDDEAVKKNRLNLL 660 >gi|126668181|ref|ZP_01739142.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter sp. ELB17] gi|126627330|gb|EAZ97966.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter sp. ELB17] Length = 694 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 195/700 (27%), Positives = 341/700 (48%), Gaps = 65/700 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + + ++ + ++ L+ G+ + + + P RL L ++ L+ Sbjct: 7 DFLVELGTEELPPKALKQLSDAFTQGIVSGLQAAGIEFGAVEPFAAPRRLALRIRDLAHA 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K E+ GP V G +A+ GF S G+ ++ D V+ V + Sbjct: 67 QPDKPVEKRGPAVKTAFDDAGNPTRALTGFATSLGVTPDELDTLETDKGAWLVFRTV--E 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +++ ++ ++ +P PK MRW + ++RP+ ++ + + Sbjct: 125 QGRTTAELMPELIEQSLAALPIPKRMRWGAHRT-----EFVRPVHWLVMLY-----GSTV 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQS-LDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ID + + GN T GHRFH P + + + D+ + +E VL D RR I + Sbjct: 175 IDHPIMGLKPGNKTRGHRFHCPKSLIIPTPADYEVVLRQEGYVLADFAQRREQIRKGVNA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA V D+ LL+E+ L EW MG F++++L +P E + ++K +QK F Sbjct: 235 LALQQNCVAVIDEALLDEVTALNEWPVPLMGRFEERFLQVPAEALISSMKEHQKYFHLVD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + FI V+N+++ D + ++ GN +V+ RL DA F++ D+ Sbjct: 295 DNGQMQPFFITVANLESKDP-SQVIAGNEKVIRPRLSDAAFFYETDRK------------ 341 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K LDQR+ RL +VF K+G+ ++ R+ L KIAQ I +D AL +RA Sbjct: 342 --------KRLDQRIDRLK--PIVFQDKLGSVYDKSVRVAALAGKIAQAIGSDPALAERA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL TE+V EF +LQG +G+ YA E+ A+ E PR +N+PT Sbjct: 392 AMLAKTDLVTEMVLEFTDLQGIMGQYYATNDGEHADVASALNEQYMPRFAKDNLPTTLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------S 526 V++AD+LD+L+ + IN+ PSG++DP+ALRRA LG++RII+E ++ + L Sbjct: 452 CAVAIADRLDSLVGLFGINQPPSGTRDPFALRRAALGVLRIIIERQLPLDLQTCCDWAAQ 511 Query: 527 QFIE------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 QF + +++ + +R + Y ++ I ++ A+ L +K + F Sbjct: 512 QFTDLPAENPATSVVDYMLERFRAYYDEQGISAEVYLAVHARRPTRPLDFDRRVKAVEAF 571 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA + +++ S LL +A + A + T Sbjct: 572 RQLPEAGALAAANKRVSNILAKQSDSTVHDTVDAS---LLQDAAELALAEQVEHQTDTVL 628 Query: 641 SMDHKRYHQIGDLLHSIC---EPIEIFFDQVLVNVDDREV 677 + K + LHS+ +P++ +FD+V+V DD V Sbjct: 629 PLFEKGDYTAA--LHSLADLHQPVDRYFDEVMVMADDEAV 666 >gi|15613934|ref|NP_242237.1| glycyl-tRNA synthetase subunit beta [Bacillus halodurans C-125] gi|11387198|sp|Q9KD48|SYGB_BACHD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|10173987|dbj|BAB05090.1| glycyl-tRNA synthetase beta chain [Bacillus halodurans C-125] Length = 693 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 205/735 (27%), Positives = 351/735 (47%), Gaps = 83/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PAR + L+ + LKE+ + ++ + + TP RL + + GL+ Sbjct: 5 DFLLEIGLEELPARFVSDGEKQLADKVESFLKEQRISFEQISSFSTPRRLAVLVIGLAEK 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF R G+ ++ D I++ KG Y+ Sbjct: 65 QADVEEESRGPAKKIALDESGNWTKAAQGFARGQGV-SVDDLYIQE--VKGTEYIFA--- 118 Query: 116 PKRLIEDVLKTIVPVA---IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K + +++P I + +PK+MRW T + + RP++ ++ + Sbjct: 119 KKFVAGQETASLLPELKELITSLHFPKNMRWHTY-----SLRYARPIQWLVALY-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ + G T GHRF + + + Y L + V+ D E R+ AI + Sbjct: 169 QEVIPFEITGVAAGLETAGHRFLGEN-VTIDEPTLYKEKLLQQYVMADSEERKKAIRHQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + + D+DLL+E+ LVE+ G FD+ +L LP E++ +++ +Q+ F Sbjct: 228 QSIMEEKDWVIPIDEDLLDEVTNLVEYPTALFGRFDEAFLSLPNEVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + + G L F+ + N IV+GN +V+ ARL DA F+ DQ Sbjct: 288 KNQAGELLPYFVTIRNGDHRHL-ENIVKGNEKVLRARLSDAAFFYGEDQ----------- 335 Query: 353 SALKFNLD-LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 K N+D +K LDQ +V+H ++G+ G+++ R++VL IA+ + + Sbjct: 336 ---KLNIDEANKRLDQ---------IVYHEELGSIGDKIKRVKVLAASIAEKLGVTSQTL 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++R + K DL T++V EFPELQG++G+ YA + E I EH PR + Sbjct: 384 QAINRVAEICKFDLVTQMVGEFPELQGRMGEVYAEIAGEPPEVAKGIVEHYLPRFAGDQS 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-------- 520 P++ VSLADKLDT+ + I P+GS+DPYALRR G+++I+L+++ Sbjct: 444 PSSVQGTVVSLADKLDTIAACFGIGLIPTGSQDPYALRRQAAGVVQILLDHELDLDVDEL 503 Query: 521 -------------IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +P S+ + + L FF R+K L D +R+DL +A+L N+ Sbjct: 504 LLETVEQLQEKELLTVPESEVV--KQLREFFALRVKTKLQDEGVRYDLTDAVLASGISNV 561 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + K L ++ + ++ + R+ I EK ++ I+P E E+ L Sbjct: 562 PVVFKKAKLLVSKVNTPEFKELVEGLSRVTNIAGKAEK-----NVAINPDLFEKEEERVL 616 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y +Q ++ L EPI +F+ V+V VD++ +++NRL+L+ Sbjct: 617 YEAYVQTKDLVQGALASGDVSAAYAALEQTIEPIHQYFEHVMVMVDEQVIKENRLALMHA 676 Query: 688 IKNIILIVINVQKIV 702 +I N Q+IV Sbjct: 677 FAGVIGSYANFQEIV 691 >gi|301794498|emb|CBW36937.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae INV104] Length = 678 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 346/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSELFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|315161676|gb|EFU05693.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0645] Length = 694 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 216/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEVKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D L+Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEALNQDVEKYGVLLKEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|312864172|ref|ZP_07724406.1| glycine--tRNA ligase, beta subunit [Streptococcus vestibularis F0396] gi|322517253|ref|ZP_08070132.1| glycyl-tRNA synthetase beta subunit [Streptococcus vestibularis ATCC 49124] gi|311100173|gb|EFQ58382.1| glycine--tRNA ligase, beta subunit [Streptococcus vestibularis F0396] gi|322124159|gb|EFX95693.1| glycyl-tRNA synthetase beta subunit [Streptococcus vestibularis ATCC 49124] Length = 678 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 211/703 (30%), Positives = 353/703 (50%), Gaps = 87/703 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDNNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIED 122 G KA GF+R GL T+ D + ++ KG+ Y+ V + KP + + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKPAK---E 128 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL VP + + +P SM W+ + F +IRP+ +++ +L ++ ++LD + Sbjct: 129 VLAG-VPEVLSSLTFPVSMHWAN-----NTFEYIRPVHTLVVLL-----GDEALNLDFLD 177 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G ++ GHRF H +++ + D Y DL V+ D + R N I + S G++ Sbjct: 178 IKSGRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIESEQGVQ 236 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L Sbjct: 237 VQIEEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPN 296 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 FI V N A + +++GN +V+ ARLED FW+ DQ LK Sbjct: 297 FISVRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQK------------LK------ 337 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 ++ +A+L +V FH KIG+ E ++R V+ +A+ L + A V RA + K Sbjct: 338 --IEDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEERAAVARAAEIYK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++L Sbjct: 394 FDLLTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 454 ADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYALSFDS 513 Query: 532 ------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +I F R+ + D+ EA+L N + D+++ + ++AK Sbjct: 514 LSYDNQAEVINFIKARVDKMMG--RTSKDIKEAVLAGSN---FVVADMLEVADALSAAAK 568 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMD 643 + + + + + + + EK + ++++ S L E EK L I + + S Sbjct: 569 ADGYKAAVESLSRAFNLAEKADDSVAVDAS----LFENNQEKVLSKAIEEL--ELTGSAS 622 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 K L ++ I+ FFD +V +D V++NRL+LL Sbjct: 623 DKLAQ-----LFALSPVIDAFFDNTMVMAEDEAVKNNRLALLS 660 >gi|258622965|ref|ZP_05717980.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM573] gi|258584748|gb|EEW09482.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM573] Length = 688 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 339/720 (47%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVTNLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTIRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAKQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DANKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|227519875|ref|ZP_03949924.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0104] gi|229545173|ref|ZP_04433898.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1322] gi|256853767|ref|ZP_05559132.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T8] gi|256963574|ref|ZP_05567745.1| glycyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257079639|ref|ZP_05574000.1| glycyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294780919|ref|ZP_06746273.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis PC1.1] gi|307270837|ref|ZP_07552124.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4248] gi|307271513|ref|ZP_07552785.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0855] gi|312905129|ref|ZP_07764250.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0635] gi|227072669|gb|EEI10632.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0104] gi|229309718|gb|EEN75705.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1322] gi|256710710|gb|EEU25753.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T8] gi|256954070|gb|EEU70702.1| glycyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256987669|gb|EEU74971.1| glycyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294452045|gb|EFG20493.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis PC1.1] gi|306511785|gb|EFM80783.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0855] gi|306512750|gb|EFM81395.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4248] gi|310631519|gb|EFQ14802.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0635] gi|315030215|gb|EFT42147.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4000] Length = 694 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|268592254|ref|ZP_06126475.1| glycyl-tRNA synthetase, beta subunit [Providencia rettgeri DSM 1131] gi|291312029|gb|EFE52482.1| glycyl-tRNA synthetase, beta subunit [Providencia rettgeri DSM 1131] Length = 689 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 200/723 (27%), Positives = 337/723 (46%), Gaps = 71/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDGADIAHGAVTWFAAPRRLALKVADLAASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 PDREIEKRGPAISQAFGPDGQPTKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAQMK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L +V A+ K+P PK MRW+ + ++RP+ ++ +L ++ +I Sbjct: 124 GQAVSELLADMVSRALAKLPIPKLMRWADKDT-----QFVRPVHTVTLLLGSD-----VI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 D ++ I G GHRF + + + Y L E V+ D R+ I DA + Sbjct: 174 DGEILGIKSGRTIRGHRFMGESEFTIDNAEQYPAILRERGKVMADYAERKAVIKADAEKA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+G + LLEE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 234 AQALGGQADLTDSLLEEVTSLVEWPVVLTAKFEEKFLDVPSEALVYTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 G L FI V+NI++SD I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 TGKLMPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++GT ++ R+ L IA I ADV Sbjct: 352 --------------------------VLFQKQLGTLRDKTDRLEALAGWIANKIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ Sbjct: 386 ATRAGLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFSGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + E Sbjct: 446 TDVSAALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + + D I+A+L +K Sbjct: 506 EAARLYGDKLTNKNVVNDVVEFMLGRFRSWYQELGYSIDTIQAVLARHPTQPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F S + + + KR+ IL+ E+K ++ + L E +L + Sbjct: 566 AVTHFRSLEEAQALAAANKRVSNILSKSEEK---LADNVLASVLKTPEEVKLATHVVVLQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + Y + L S+ + ++ FF V+V +D+ VR NRL+LL ++ + L V Sbjct: 623 DKLAPMFAERNYQEALVELASLRDIVDEFFANVMVMDEDQAVRINRLTLLSQLRELFLKV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|261405620|ref|YP_003241861.1| glycyl-tRNA synthetase subunit beta [Paenibacillus sp. Y412MC10] gi|261282083|gb|ACX64054.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus sp. Y412MC10] Length = 691 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 215/729 (29%), Positives = 356/729 (48%), Gaps = 99/729 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI EE+PAR A E L L+ L+ + + + + TP RL ++++ ++ Sbjct: 4 DLLFEIGLEEVPARFLRAAMEQLQDKLVKWLETSRIAHGEVTAFATPRRLAVWVQNVADK 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKK-------GDV 108 + EE GP G KA GF +S G+ DP+ G Sbjct: 64 QEDVSEEVKGPSRKIALDDSGQWSKAALGFAKSQGV----------DPESFTFKELGGVE 113 Query: 109 YLAVLRKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 Y+ V + + + +L + + + +PK+MRW F ++RP+K ++ +L Sbjct: 114 YIYVTKNSVGVDTKSILSEGLLGILTSMTFPKNMRWGAHE-----FKFVRPIKWMVAMLG 168 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 +E +DL++ + GN+T GHRF + + Y L E V++D R+ Sbjct: 169 SE-----TVDLEITGVKAGNVTRGHRFLGGEAV-IPEASAYRDVLREQHVIVDVNERQEM 222 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I++ LA + DLLEE++ LVE V GSFD +L +P+E++ +++ +Q Sbjct: 223 IVSQIQALAQEKDWNIAIKDDLLEEVLFLVETPTVLYGSFDSSFLHIPQEVLITSMREHQ 282 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGA--AIVQGNSRVVAARLEDALHFWKRDQNNLP 345 + F ++G L F+ +++ D + I +GN +V+ ARL DA F++ DQ Sbjct: 283 RYFPVLDKQGQLLPYFV---TVRSGDSRSLDVIARGNEKVLRARLSDAKFFYEEDQK--- 336 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI-AQL- 403 L+ LSK + +VFH ++GT G++V RIR + ++ A+L Sbjct: 337 ---------LQIKDALSK----------LESIVFHEELGTIGDKVRRIRRISDQLSAKLN 377 Query: 404 IDADVA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 + AD A V RA + K DL T++V EFPELQG +G++YA E A+ EH +PR Sbjct: 378 VSADAADSVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEHVAKAVFEHYQPR 437 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 ++VP+ + VS+ADK+DT++ ++I P+GS+DPYALRR GI++IILE+K+ Sbjct: 438 FAGDSVPSTTVGSIVSIADKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQIILEHKLP 497 Query: 523 IPLSQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + LS ++L FF R+K L + D R+D+++A++ Sbjct: 498 VTLSDVFGVALEVHENIRVLKRSTDEIRKDLKEFFGLRVKKLLSE-DQRYDVVDAVITAG 556 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+++++V L S + K + + LA + K ++ + Sbjct: 557 FDHVVSVVSRGHALMNAVESVQDFKTTVESFNRVSNLAAKAGK-----AAVNAELFTESE 611 Query: 624 EKRLY----AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 E +LY A+ +D+ +Q + D +R LL + EPI FFD V+V +D VR Sbjct: 612 ENKLYEAWNAIRADYHAALQ-AADGERSLS---LLSGLREPITGFFDSVMVMAEDEAVRA 667 Query: 680 NRLSLLQYI 688 NRL+LL I Sbjct: 668 NRLALLSGI 676 >gi|148997465|ref|ZP_01825070.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP11-BS70] gi|307068124|ref|YP_003877090.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae AP200] gi|147756520|gb|EDK63561.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP11-BS70] gi|306409661|gb|ADM85088.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae AP200] Length = 678 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 346/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQL-IDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL + A L +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKASLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|330881826|gb|EGH15975.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 560 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 181/591 (30%), Positives = 286/591 (48%), Gaps = 51/591 (8%) Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L TIV ++ +P K MRW ++RP + ++ + ++++D + Sbjct: 2 LLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVDCTILA 51 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 52 QSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELATQQEGT 111 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F EG L Sbjct: 112 AIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEGKLLPR 171 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 FI V+NI++ D A IV GN +VV RL DA F+K+D+ K+ FN L Sbjct: 172 FITVANIESKDP-AQIVTGNEKVVRPRLTDAEFFFKQDK---------KQKLETFNDRLK 221 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 +VVF A++G+ ++ R+ L IA I D RA +LSK DL Sbjct: 222 -------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLLSKCDL 268 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 +E+V EFPE+QG G YA E A+ E PRG +PT V++ADK Sbjct: 269 SSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAVAIADK 328 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 329 LDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFGAKIKP 388 Query: 531 ---DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + ++ F DRL+ D + + ++ + + L ++ + F + Sbjct: 389 AGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRKLPQAA 448 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 KR+ +L+ K I+ + P+Y E LY+ I +Q ++Y Sbjct: 449 ALAAVNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMAAERQY 505 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 506 SESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 556 >gi|168575932|ref|ZP_02721847.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae MLV-016] gi|194398749|ref|YP_002038109.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae G54] gi|238690835|sp|B5E642|SYGB_STRP4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|183578380|gb|EDT98908.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae MLV-016] gi|194358416|gb|ACF56864.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae G54] gi|332199520|gb|EGJ13595.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA41317] Length = 678 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 345/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|225857101|ref|YP_002738612.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae P1031] gi|254781867|sp|C1CLH4|SYGB_STRZP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225724579|gb|ACO20431.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae P1031] Length = 678 Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 345/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEYF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|91781832|ref|YP_557038.1| glycyl-tRNA synthetase subunit beta [Burkholderia xenovorans LB400] gi|91685786|gb|ABE28986.1| glycyl-tRNA synthetase beta chain [Burkholderia xenovorans LB400] Length = 699 Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 206/686 (30%), Positives = 338/686 (49%), Gaps = 61/686 (8%) Query: 42 NMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ-- 92 + +Y TP RL + +K + +PEK + E++ P + G + L + G Sbjct: 49 SFERYATPRRLAVTIKNVRAVAPEKHVREKVLPVSVALDKDGQPTAPLAKKLAALGFPDF 108 Query: 93 TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 +++D + +D K + + P + + L++ + + ++P PK M + + Sbjct: 109 SVNDLERAQD-GKAEAFFLRYAAPGATLAEGLQSALDETLARLPIPKVMTYQRPDG--TN 165 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 ++RP ++ + E+I+ + I + T GHRF + +++Q D Y L Sbjct: 166 VQFVRPAHRLIAL-----HGEQIVPVSALGIDADDTTLGHRFLSEGFVQIQHADSYAETL 220 Query: 213 -EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKY 271 + V+ + R+ I H LA A G ++V + LL+E+ LVEW V+ F+ ++ Sbjct: 221 LHKGRVVANFSDRKETIRT--HLLAQANGDQVVMPESLLDEVTSLVEWPVVYACRFEDEF 278 Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 L +P+E + LT++TNQK F G L + F++VSNI+ S G IV+GN RVV RL Sbjct: 279 LQVPQECLILTMQTNQKYFALTDANGKLRSRFLIVSNIETSTPGD-IVEGNERVVRPRLA 337 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F+++D+ K L R+ L +VV+H K+G+ +RV Sbjct: 338 DAKFFFEQDKK--------------------KTLADRVPLL--ANVVYHNKLGSALQRVE 375 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R+ L IA LI ADVAL RA L+KADL T++V EFPELQG +G YA E Sbjct: 376 RVEALAGAIAGLIGADVALAKRAARLAKADLITDMVGEFPELQGTMGTYYARHDGEPEEV 435 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A EH +PR + +P V+LADKL+TL+ W I +P+G KDP+ALRR LG Sbjct: 436 ALACSEHYQPRFSGDALPATATGTVVALADKLETLVGIWGIGLQPTGEKDPFALRRHALG 495 Query: 512 IIRIILENKIDIPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLI 556 ++RI++E ++ + + + + Q + F DRL+ L +R I Sbjct: 496 VLRILVEKQLPVDFVELLRNAYAQFAAVPNVVDSTQAIYEFSMDRLRGLLRERGYAPGEI 555 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L L IV + + EF S A+ + KRI IL +K + + Sbjct: 556 DAVLALNPTRLDDIVARLDAVREFASLAEAASLAAANKRISNIL---KKSEGAATGGVQV 612 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 L+ AEK L+A + +Q + + Y L ++ EP++ FF+ V+VN +D Sbjct: 613 TLLVEAAEKALHAQLEQVAPRVQSQLAARDYTGALTALAALREPVDTFFNDVMVNAEDPA 672 Query: 677 VRDNRLSLLQYIKNIILIVINVQKIV 702 +R NRL+LL + + V ++ ++ Sbjct: 673 LRANRLALLGALHQQMNCVADISRLA 698 >gi|149011706|ref|ZP_01832902.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP19-BS75] gi|147764137|gb|EDK71069.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP19-BS75] Length = 678 Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 347/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + T I ++ Q Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVE---TLILSGPASQQLKQ 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|148992641|ref|ZP_01822309.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP9-BS68] gi|168489636|ref|ZP_02713835.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP195] gi|147928658|gb|EDK79672.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP9-BS68] gi|183571932|gb|EDT92460.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP195] gi|332072269|gb|EGI82752.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA17570] Length = 678 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 346/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSELFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|284008981|emb|CBA75885.1| glycyl-tRNA synthetase beta subunit [Arsenophonus nasoniae] Length = 688 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 206/726 (28%), Positives = 351/726 (48%), Gaps = 77/726 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + Y +P RL L + L+ + Sbjct: 5 FLVEIGTEELPPKALRLLAESFAANFKHQLTQAELPHGEVLWYASPRRLALKVTDLAAYQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ Sbjct: 65 ADREVEKRGPAISQAFDASGKPTKAAEGWARGCGISVEQVERLVTD--KGEWLFYRATNE 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + +L +V A+ ++P PK MRW + ++RP+ +++ +L ++++ Sbjct: 123 GQAAQVLLGDMVVNALSQLPIPKLMRWGDKET-----QFVRPVHTVIMLL-----GDQLL 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + ++ + G + GHRF + + S + Y L E V+ D E R+ I + A+++ Sbjct: 173 EGEVLGVQSGRMIRGHRFMGEAELTIDSAEQYPAILRERGKVIADYEERKALIKHQANKV 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K++QK F + Sbjct: 233 AQQLGGTAELSDSLLEEVTSLVEWPVVLNAKFEQKFLSVPAEALVHTMKSDQKYFPVYDK 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++S+ IV GN +V+ RL DA F Sbjct: 293 VGNLMANFIFVANIESSEP-QQIVAGNEKVIRPRLADAEFF------------------- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F D K L++ + RL+ V+F ++ + ++ R+ VL IA I ADV RA Sbjct: 333 -FKTDCKKRLEEHLPRLET--VLFQKQLDSLRDKTDRLEVLAGWIAAKIGADVNHATRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E AI+E +PR + +PTN +++ Sbjct: 390 LLSKCDLMTNMVFEFTDTQGVMGMHYARRDGEAEEVALAIKEQYQPRFAGDQLPTNPVAV 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-------SQF 528 ++LADK+DTL+ + I + P G KDP+ALRRA LG++RII+E D+ L +Q Sbjct: 450 ALALADKMDTLVGIFGIGQPPKGDKDPFALRRAALGVLRIIVEKGYDLDLLALTQQTAQL 509 Query: 529 IEDQ--------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 D+ +++ F R + + ++ R D I+A+L +K + F Sbjct: 510 YGDKLTNKNVIDDVVEFMLGRFRAWYQEQGYRIDTIQAVLARRPTKPADFDARVKAVTHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEI--SPQYLLLEA-----EKRLYAVIS 632 + E KR+ IL +EK N ++ + +P+ + L A + +L + + Sbjct: 570 RTLEAAEALAAVNKRVANILTKSDEKLNDNVAASVLKAPEEVTLAAHLVVLQDKLAPLFA 629 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 D +Y L S+ E I+ FFD V+V D++VR NRL+LL ++++ Sbjct: 630 D-----------GKYQGALIELASLREVIDAFFDNVMVMDTDQKVRINRLTLLSQLRDLF 678 Query: 693 LIVINV 698 L V ++ Sbjct: 679 LQVADI 684 >gi|217967701|ref|YP_002353207.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus turgidum DSM 6724] gi|226737050|sp|B8E0E8|SYGB_DICTD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|217336800|gb|ACK42593.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus turgidum DSM 6724] Length = 689 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 203/729 (27%), Positives = 357/729 (48%), Gaps = 74/729 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI +EE+PA A + + + + + + +++++ + TP RL +Y+K LS Sbjct: 4 NFLLEIGTEEMPAHFLDPAIKQIYDFSLNYFENQKISFEDIKTWATPRRLVVYIKNLSEK 63 Query: 63 SPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP G K F G ++ IK+ P+ ++L +++ Sbjct: 64 QESQEEEIRGPAAHVGYKNGVWTEVAKRFAEQYG-ASLEALYIKETPRGKYIFLKRIKEG 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +E +L ++ + +PK M+W F + RP++ I+ + +E+ K Sbjct: 123 VNTLE-ILPDYAVSLLKNIRFPKMMKWGNVD-----FYFGRPIRWIVALYGSEEVK---- 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 ++ + + RF PI+++ D YI ++E V++D R+N IL +A Sbjct: 173 -FEVAGVKSSRYSRPPRFLPQTPIEIKDADSYIDLMKENYVIVDQNERKNEILRHIKEIA 231 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++ L L D+DLLEE+ LVE+ +G FD KYL LPE ++ +T++ Q+ F R +E Sbjct: 232 NSNSLTLSYDEDLLEEVTYLVEYPTALLGQFDSKYLTLPEIVLIVTMEKKQRYFPLRDKE 291 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N FI++ N + ++QGN +V+ ARL DA ++ Sbjct: 292 GNLINKFIVIRN-GTENYKEVVIQGNEKVLKARLADAEYY-------------------- 330 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDR 413 +N D+ PL++ +L ++F ++GT ++V R+R+L ++IA +++ +++R Sbjct: 331 YNEDIRCPLEKYSEKLS--GIIFQEQLGTIKDKVERVRILVREIANILELSTEEKEILER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ L KADL T +V E+PEL G +G YA + E I E++ PR + +P N + Sbjct: 389 AVDLYKADLGTLMVSEYPELHGIMGSIYAKISGEREPIPQIIGEYIYPRTLEDQIPKNPL 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI---------- 523 S + +AD++D+L ++A++ P+GS+DP LRR + G++R++LE + Sbjct: 449 STVLGIADRVDSLTGYFALDLFPTGSEDPIGLRRISGGLLRLLLETDFKLNLRNLFMKSF 508 Query: 524 ---------PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 P+SQ + +LF RL+ L D+ +D++EA++ D L + + Sbjct: 509 EVYKFSDKCPISQI---EKGMLFIGQRLRNLLLDK-YPNDIVEAVMEVGYDELWKLKRRV 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + EF EK + R+++IL + EI+ EK LY Sbjct: 565 DFIREFKEKDPYEKLKRALNRLYRILPKDFSPK-----EINENLFNSPFEKELYRDYVKI 619 Query: 635 GTHIQESMDHKRYHQI--GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I + + Y + D L + IE FFD VLV + E + NRLSLL IK++ Sbjct: 620 NKEISKEILKGNYKVLLGYDFLKEFSDHIESFFDHVLVMSPNEEEKLNRLSLLFAIKSLF 679 Query: 693 LIVINVQKI 701 V++ K+ Sbjct: 680 WEVLDWSKL 688 >gi|257084566|ref|ZP_05578927.1| glycyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|307287714|ref|ZP_07567757.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0109] gi|256992596|gb|EEU79898.1| glycyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|306501452|gb|EFM70755.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0109] gi|315164813|gb|EFU08830.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1302] Length = 694 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|171056906|ref|YP_001789255.1| glycyl-tRNA synthetase subunit beta [Leptothrix cholodnii SP-6] gi|238689122|sp|B1Y7P2|SYGB_LEPCP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170774351|gb|ACB32490.1| glycyl-tRNA synthetase, beta subunit [Leptothrix cholodnii SP-6] Length = 713 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 212/731 (29%), Positives = 351/731 (48%), Gaps = 72/731 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 P+ L+E++ EE+P + K E + L LK G+ + + + +P RL +++ G+ Sbjct: 4 PNLLVELFVEELPPKALKKLGESFAGTLAASLKAGGLAGADAVVTPFASPRRLAVHVTGV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLA 111 + + +K + +L P G A+ L + G +K+ P K + Sbjct: 64 AAKAADKSVLHKLMPVAVALDAAGNATPALLKKLAALGADASVVPSLKRQPDGKAEALFL 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + L+ + A+ K+P PK M + ++ +++RP ++ + Sbjct: 124 DSQVAGATLAEGLQKALDDALAKLPIPKVMGYQLADG-WTSVNFVRPAHGLVAL-----H 177 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 + ++ + + G T+GHRF A P ++++ D Y LE E V+ E RR I+ Sbjct: 178 GDDVVPVATLGLVAGRSTHGHRFEAAVPTVELRHADSYAEQLETEGAVIAGFEARRAEIV 237 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A+A GL+ ++D LL+E+ LVE V + F+ ++L +P+E + LT+K NQK Sbjct: 238 RQLDAAAAAQGLKPIDDDALLDEVTALVERPNVLVCQFEPEFLAVPQECLILTMKANQKY 297 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L + F++VSNI+ D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 FPLLDAAGKLTHKFLIVSNIRPDDA-SAVIGGNERVVRPRLADAKFFFDQDRK------- 349 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ------- 402 K L+ R+ L VV+H K+GTQGER R+R +G I Sbjct: 350 -------------KTLESRVPGLAR--VVYHGKLGTQGERAERVRAIGHAIVNQLRMATI 394 Query: 403 --LIDA--DVALVD----RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 +DA + A++D +A +L+K DL T++V EFPELQG +G YA + A Sbjct: 395 PYTVDAQDEFAVLDSKVQQAALLAKTDLLTDMVGEFPELQGIMGGYYARHEGLRDGVAIA 454 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 IE+H KPR + +P N ++LADKL+TL+ + I + P+G +DP+ALRR LG+IR Sbjct: 455 IEDHYKPRFAGDALPRNHTGTVLALADKLETLVGLFGIGQLPTGDRDPFALRRHALGVIR 514 Query: 515 IILENK--IDIP---------LSQFIEDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILR 561 I++E +D+P + IED L L F DRL + L D+ ++A+L Sbjct: 515 ILVEKNLPLDLPALLNGAVPAFGELIEDPRLALFDFMRDRLAVNLRDQGYSAQEVDAVLA 574 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 E L + + + F + + + KRI IL +K + I L Sbjct: 575 LEPARLGDVPKRLAAVRAFAALPEAAALAAANKRIGNIL---KKAEGTVEARIDAALLAE 631 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 AE++L A ++ Y L ++ P++ FFD V+VN +D +R NR Sbjct: 632 PAEQQLAAALAQVQPGADALFAQGEYAASLQALAALKAPVDAFFDDVMVNAEDPALRANR 691 Query: 682 LSLLQYIKNII 692 L LL + + Sbjct: 692 LGLLATLHGAM 702 >gi|315170296|gb|EFU14313.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1342] Length = 694 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PKTAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|149191882|ref|ZP_01870116.1| glycyl-tRNA synthetase subunit beta [Vibrio shilonii AK1] gi|148834274|gb|EDL51277.1| glycyl-tRNA synthetase subunit beta [Vibrio shilonii AK1] Length = 688 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 202/699 (28%), Positives = 332/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK+ + ++ ++ Y P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFESELKDADLAHEGVKWYAAPRRLALKVSALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 QADKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVDQAERLVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQATSEIIVELAAKALANLPIAKPMRWGDKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++S + Y LEE V+ D + R+ IL D+ + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYDARKAIILADSQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ IDADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIDADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPSTGIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN + L+ I Sbjct: 449 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYSLDLTDLIAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++++ F R + D D+I+A+L +K ++ Sbjct: 508 LFGDKLTNANVEEDVLEFMLGRFNAWYKDEGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ +I L +AEK L + ++ Sbjct: 568 FRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKVLAENVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|262172786|ref|ZP_06040464.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus MB-451] gi|261893862|gb|EEY39848.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus MB-451] Length = 688 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 206/720 (28%), Positives = 339/720 (47%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGRE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + I GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVKSDRIVRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAKQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNTNVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|227524442|ref|ZP_03954491.1| glycine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] gi|227088401|gb|EEI23713.1| glycine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] Length = 693 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 210/732 (28%), Positives = 352/732 (48%), Gaps = 77/732 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI EEIPA + + L LK++ + + ++ + TP RL LY+ GL+ Sbjct: 4 NFLLEIGLEEIPAHVVTPSINQLKKRASDYLKDQRITFDQIKTFSTPRRLTLYITGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ + GP G KA GF R G T D K+ KG Y+ V + Sbjct: 64 QPDIDKSVKGPAKKIAQDTDGNWTKAAIGFSRGQG-ATTDDITFKE--VKGTDYVFVEKH 120 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +++VL + V I + +P M+W+ +F ++RP+K ++ +L +K Sbjct: 121 IAGKSVDEVLTGMKDV-ITAMTFPTMMKWAKY-----SFEYVRPIKWLVALL-----NDK 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + ++ +T GHRF +++ + D Y L + V+ D + R+ I+ H+ Sbjct: 170 VIPFTILDVSTDRVTSGHRFLGKD-VELANADEYEEKLTQQFVIADAKKRKELIVKQIHK 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ D DLLEE+ LVEW F G F++KYL +P+E++ ++K +Q+ F Sbjct: 229 IAEDNDWQINLDPDLLEEVNNLVEWPTAFAGKFNEKYLKIPDEVLVTSMKDHQRFFYVTD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V N D ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 289 GNGTLLPHFISVRNGNDYDI-QNVIAGNEKVLTARLEDAMFFYEEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV----LGKKIAQLIDADVAL 410 K + + + RL V FH KI T E++ R++V LGK+ D ++ Sbjct: 335 -------KKTIAEDVERLKK--VSFHDKISTMFEKMQRVQVISNYLGKQFG-FSDKELED 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 385 EQRAAEIYKFDLVTGMVGEFAELQGVMGEKYALLNGEAPAVAKAISEHYMPISANGALPA 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + + ++++DKLD+++ F+A PSGS DPYALRR GI+RI+ + K + L Sbjct: 445 SNVGALLAVSDKLDSILTFFAAGMIPSGSNDPYALRRQATGIVRIVADKKWNFDLIDTLK 504 Query: 529 ----IEDQNLIL--------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ++D+ + F DR+K YL D IR+D+ +A+ ++L Sbjct: 505 AIINLQDEKQVAPKLDQAGQITAVSDFIKDRIKQYLDDLGIRYDISDAVTSGSQTDILFN 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + + L E + + S R+ +I K+ ++ ++ S E+EK L Sbjct: 565 ISSGQVLQEQKDDDAFKSIIESLTRVLRISKKGHFKDNDLVVDGS--LFENESEKVLNQE 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ E + + D L + + I +FD +V D ++RDN L L + + Sbjct: 623 VASAAEGYYEISAKEDF----DRLSGLKDAINAYFDATMVMDKDEKLRDNHLRQLTLLSH 678 Query: 691 IILIVINVQKIV 702 +IL + ++ K+V Sbjct: 679 LILHLGDLDKLV 690 >gi|168493376|ref|ZP_02717519.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC3059-06] gi|183576507|gb|EDT97035.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC3059-06] Length = 678 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 346/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQL-IDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL + A L +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKASLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|254713029|ref|ZP_05174840.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] Length = 268 Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 134/268 (50%), Positives = 170/268 (63%), Gaps = 1/268 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSF 267 GLELVED LLEE+ GLVEW V MG F Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEF 268 >gi|315032900|gb|EFT44832.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0017] Length = 694 Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|254302499|ref|ZP_04969857.1| glycine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322691|gb|EDK87941.1| glycine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 686 Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 207/735 (28%), Positives = 363/735 (49%), Gaps = 87/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKNNFERKLKNNRIKFSGVRTYGTPRRLVLVADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Y+A R Sbjct: 62 QEDLDELNIGPSRERAYKDGALTKAGEGFLKAHRIEEEQIEIIKND--KGE-YIAFKRFS 118 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E +L I+ + + + KSMRWS + RP++ L + K+ Sbjct: 119 KGKPTETILPEILKALVLEETFQKSMRWSD-----KTIRFARPIEWFLALYGG-----KV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ I N + GHRF +V S++ Y++ ++E V+++ RR I + Sbjct: 169 VDFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIKENNVIINISERRKMI----EEM 223 Query: 236 ASAVGLELVE---DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 S LE + D+ LL+E+ LVE+ +G+F +++L +P+E++ +++K +Q+ F Sbjct: 224 ISKSLLEDEKADVDEGLLDEVTNLVEYPFAIVGNFSEEFLEVPQEVLIISMKVHQRYFPI 283 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 284 LNKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED------------ 329 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR-----VLGKKIAQLIDAD 407 L PLD + +L VVF +GT ++V R ++GK + D Sbjct: 330 --------LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVGKLKYNYMKED 379 Query: 408 VALVDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 + R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR Sbjct: 380 IL---RTVKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQG 436 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L Sbjct: 437 DLLPSGIEGIIAGISDRIDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANLDISL 496 Query: 526 SQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 ++ + +++ F R+ D R D+I A+L + DN Sbjct: 497 KDLVKVSLDALEADKVLKTDRVKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADN 556 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + T +++++ + E S K + L + KR+F I+ K +++++ I + + EK Sbjct: 557 ITTALEIVRVITEKLSKDKMQALLQAVKRVFNIM----KGSKDVT--IKEKLFKTDIEKT 610 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY G ++++ K Y + L ++ I+ +F+ V+V +D+ VRDNR+ L Sbjct: 611 LYTESKKVGEEAEKAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIGQLT 670 Query: 687 YIKNIILIVINVQKI 701 YI N+ + ++ K+ Sbjct: 671 YIMNLFGKIASLNKL 685 >gi|311696630|gb|ADP99503.1| glycyl-tRNA synthetase beta subunit [marine bacterium HP15] Length = 693 Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 197/698 (28%), Positives = 340/698 (48%), Gaps = 60/698 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + ++ + + L+E G+ + + + P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALKPLSDAFTQGIARGLEEAGIEFGKVEAFAAPRRLAVRIRDLADS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K E+ GP V G +A+ GF S G+ ++ D VY V + Sbjct: 65 QPDKSVEKRGPAVKAAFDDAGNPTRALTGFATSLGVTPDQLDTLETDKGAWVVYRTV-EQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K +E ++ +V ++ +P PK MRW + ++RP+ ++ + K+ Sbjct: 124 GKPTVE-LMPELVEQSLAGLPIPKRMRWGAHRT-----EFVRPVHWVVMLF-----GNKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ + + GN T GHRFH P + V + Y L +E V+ D RR I Sbjct: 173 IEAPIMGLTPGNKTRGHRFHCPKSLIVPTPSDYEVVLKQEGYVIADFAERREQIRAGVTE 232 Query: 235 LASA-VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G + V D+DLL+E+ L EW MG F++++L +P E + ++K +QK F Sbjct: 233 LAEKEAGGKAVIDEDLLDEVTALNEWPVPLMGRFEERFLEVPAEALISSMKEHQKYFHVV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G + FI V+NI++ D + +V GN +V+ RL DA F++ D +++ Sbjct: 293 AADGEMLPLFITVANIESKDP-SQVVSGNEKVIRPRLSDAAFFYETD----------RKT 341 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L+ +D KP +VF K+G+ ++ R+ L KKIA I +D AL +R Sbjct: 342 KLEDRIDALKP------------IVFQEKLGSIYDKSVRVAALAKKIADAIGSDPALAER 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL TE+V EF +LQG +G+ YA E A+ E PR +++PT Sbjct: 390 AAMLAKTDLVTEMVLEFTDLQGIMGQYYAANDGEPEDVAKALNEQYMPRFAGDDLPTTLT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 +++AD+LD+L+ + IN+ PSG++DP+ALRRA+LG++RII+E ++ + L E Sbjct: 450 GCAIAIADRLDSLVGLFGINQPPSGTRDPFALRRASLGVLRIIIERELPLDLQTCCEWAE 509 Query: 531 -------DQN----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN ++ + +R + + ++ I ++ A+ L +K + Sbjct: 510 ENFSVLTEQNTASTVVDYMLERFRAHYDEQGIGAEVYLAVHARRPTRPLDFDRRVKAVEA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ IL ++ I + L AEK L + + Sbjct: 570 FRQLPEAQALAGANKRVSNILT--KQGGDSIGETVDASLLQDSAEKALAEQVDQQAAKVL 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 ++ Y L S+ P++ FFD+V+V DD V Sbjct: 628 PLFENGDYASALSSLASLRAPVDNFFDEVMVMADDEAV 665 >gi|256961299|ref|ZP_05565470.1| glycyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|293383583|ref|ZP_06629493.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis R712] gi|293387304|ref|ZP_06631860.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis S613] gi|312909479|ref|ZP_07768334.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 516] gi|256951795|gb|EEU68427.1| glycyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|291079095|gb|EFE16459.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis R712] gi|291083202|gb|EFE20165.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis S613] gi|311290152|gb|EFQ68708.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 516] Length = 694 Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QVDVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|304415609|ref|ZP_07396219.1| glycine tRNA synthetase beta subunit [Candidatus Regiella insecticola LSR1] gi|304282541|gb|EFL91094.1| glycine tRNA synthetase beta subunit [Candidatus Regiella insecticola LSR1] Length = 690 Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 209/721 (28%), Positives = 341/721 (47%), Gaps = 67/721 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + A+ + I L + + + N++ + TP RL L + LS Sbjct: 7 FLVEIGTEELPPKALRSLAQSFADHFITELNDAHLSHGNLKWFATPRRLALQVTDLSTTQ 66 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++I E+ GP + G KA + + G+ +++ + KG+ L + Sbjct: 67 ADRIIEKRGPAITQAYDALGKATKAAESWACGCGITLDQAERLRTE--KGEWLLYRAQIK 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L E +I Sbjct: 125 GQSATSLLPRLVNTALSKLPIPKLMRWGDKST-----QFVRPVHTVTLLLGNE-----LI 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 L + + GHRF + + + + Y + L V+ D E R+ I + + Sbjct: 175 PGTLLGVDSARLIRGHRFMGEATLTLDNAEQYRQILLTRGSVIADYETRKAQIKSQIEQT 234 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G D+DLLEE+ LVEW V SF+KK+L +P E + T+K +QK F + Sbjct: 235 AQTLGGIADIDEDLLEEVTSLVEWPVVLTASFEKKFLLVPAEALVHTMKADQKYFPVYDQ 294 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L++ FI V+NI AS I+ GN +V+ RL DA F Sbjct: 295 VGQLSSNFIFVANI-ASKDPQQIIAGNEKVIRPRLADAEFF------------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D KPL + RL+ V+F ++GT ++ RI L IA+ I AD+ RA Sbjct: 335 -FNTDRQKPLLDYLPRLE--SVLFQQQLGTLRDKTDRISALSGWIAEQIGADIPHAIRAG 391 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF E QG +G YA E+ A+ E PR + +P+ +S Sbjct: 392 LLSKCDLMTNMVFEFTETQGMMGMHYARHDGEDEQVALALYEQYLPRFSGDLLPSKPVSC 451 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL---------- 525 +++ADK+DTL+ + I + P G KDP+ALRRA LG++RII NK+ + L Sbjct: 452 ALAIADKIDTLVGIFGIGQPPKGDKDPFALRRAALGVLRIITLNKLPLDLQTLSQQAERL 511 Query: 526 --SQFIEDQN---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 S+ I + ++ F R + + + D I+A+L IK ++ F Sbjct: 512 YGSKLINKKGVNEVVEFMLGRFRAWYQEEGHSVDTIQAVLACHPTKPADFDARIKAVSHF 571 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEK---KNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + + KR+ ILA + ++SL P L L + +SD Sbjct: 572 RTLDAAVALTAANKRVSNILAKSTDILPDDVDVSLLTDPAELTLATD---LIALSD---Q 625 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ RY + L ++ E ++ FFD V+V V+D +R NRL+LL ++ + L + + Sbjct: 626 LEPLFASGRYQEALSKLAALREVVDRFFDNVMVMVEDNSMRINRLTLLNKLRALFLKIAD 685 Query: 698 V 698 + Sbjct: 686 I 686 >gi|261213255|ref|ZP_05927537.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC341] gi|262402073|ref|ZP_06078637.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC586] gi|260837529|gb|EEX64232.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC341] gi|262351719|gb|EEZ00851.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC586] Length = 688 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 339/720 (47%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTIRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|315150154|gb|EFT94170.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0012] Length = 694 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTLSRIQLEEKVIEFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|15640052|ref|NP_229679.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587243|ref|ZP_01677016.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 2740-80] gi|147674732|ref|YP_001218392.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae O395] gi|153817571|ref|ZP_01970238.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae NCTC 8457] gi|153821948|ref|ZP_01974615.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae B33] gi|227080257|ref|YP_002808808.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae M66-2] gi|229508305|ref|ZP_04397809.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae BX 330286] gi|229508856|ref|ZP_04398347.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae B33] gi|229517127|ref|ZP_04406573.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC9] gi|229606579|ref|YP_002877227.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae MJ-1236] gi|254851584|ref|ZP_05240934.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae MO10] gi|255746798|ref|ZP_05420744.1| glycyl-tRNA synthetase beta chain [Vibrio cholera CIRS 101] gi|262167108|ref|ZP_06034823.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC27] gi|298501204|ref|ZP_07011003.1| glycyl-tRNA synthetase, beta subunit [Vibrio cholerae MAK 757] gi|11387203|sp|Q9KVW8|SYGB_VIBCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|172047498|sp|A5F487|SYGB_VIBC3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781870|sp|C3LP93|SYGB_VIBCM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|9654412|gb|AAF93198.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548489|gb|EAX58545.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 2740-80] gi|126511839|gb|EAZ74433.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae NCTC 8457] gi|126520568|gb|EAZ77791.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae B33] gi|146316615|gb|ABQ21154.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae O395] gi|227008145|gb|ACP04357.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae M66-2] gi|227011977|gb|ACP08187.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae O395] gi|229346190|gb|EEO11162.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC9] gi|229354131|gb|EEO19063.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae B33] gi|229354578|gb|EEO19500.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae BX 330286] gi|229369234|gb|ACQ59657.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae MJ-1236] gi|254847289|gb|EET25703.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae MO10] gi|255735555|gb|EET90954.1| glycyl-tRNA synthetase beta chain [Vibrio cholera CIRS 101] gi|262024494|gb|EEY43180.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC27] gi|297540076|gb|EFH76138.1| glycyl-tRNA synthetase, beta subunit [Vibrio cholerae MAK 757] Length = 688 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|168483914|ref|ZP_02708866.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|172042754|gb|EDT50800.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|332200037|gb|EGJ14110.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA47368] Length = 678 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 345/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + G+ + Sbjct: 181 GRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEVKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEIPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMNFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|121727896|ref|ZP_01680955.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V52] gi|121629840|gb|EAX62255.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V52] Length = 688 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLLGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|29376901|ref|NP_816055.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis V583] gi|227553938|ref|ZP_03983985.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis HH22] gi|255975192|ref|ZP_05425778.1| glycyl-tRNA synthetase [Enterococcus faecalis T2] gi|257087438|ref|ZP_05581799.1| glycyl-tRNA synthetase [Enterococcus faecalis D6] gi|307285811|ref|ZP_07565945.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0860] gi|81838860|sp|Q831U3|SYGB_ENTFA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|29344366|gb|AAO82125.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis V583] gi|227176924|gb|EEI57896.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis HH22] gi|255968064|gb|EET98686.1| glycyl-tRNA synthetase [Enterococcus faecalis T2] gi|256995468|gb|EEU82770.1| glycyl-tRNA synthetase [Enterococcus faecalis D6] gi|306502572|gb|EFM71839.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0860] gi|315025406|gb|EFT37338.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2137] gi|315574361|gb|EFU86552.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0309B] gi|315580164|gb|EFU92355.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0309A] Length = 694 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|169832877|ref|YP_001694890.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae Hungary19A-6] gi|238688367|sp|B1ICQ5|SYGB_STRPI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|168995379|gb|ACA35991.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae Hungary19A-6] Length = 678 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 347/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + T I ++ Q Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVE---TLILSGPASQQLKQ 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|332200920|gb|EGJ14991.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA47901] Length = 678 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 345/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPVVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSELFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|225860757|ref|YP_002742266.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae Taiwan19F-14] gi|298254994|ref|ZP_06978580.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502571|ref|YP_003724511.1| glycyl-tRNA synthetase, subunit beta [Streptococcus pneumoniae TCH8431/19A] gi|254781868|sp|C1CQP4|SYGB_STRZT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225728048|gb|ACO23899.1| glycyl-tRNA synthetase beta chain (Glycine--tRNA ligasebeta chain) (GlyRS) [Streptococcus pneumoniae Taiwan19F-14] gi|298238166|gb|ADI69297.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae TCH8431/19A] gi|327389660|gb|EGE88005.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA04375] Length = 678 Score = 266 bits (681), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 345/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVHIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|297624434|ref|YP_003705868.1| glycyl-tRNA synthetase subunit beta [Truepera radiovictrix DSM 17093] gi|297165614|gb|ADI15325.1| glycyl-tRNA synthetase, beta subunit [Truepera radiovictrix DSM 17093] Length = 710 Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 208/737 (28%), Positives = 345/737 (46%), Gaps = 92/737 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EE+P+ + E L ++ L+ G+ Y+ ++ + TP RL + + GL+ Sbjct: 1 MATLLFEIGTEELPSWYVTQGREALELLTRERLEAAGLAYEGLKGFATPRRLAVQVAGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 SP + + GP GA KA GF R+ G+ S+ +++ K V+ Sbjct: 61 DTSPVRELLQRGPAASAAFDASGAPTKAAVGFARANGVDP-SELFVQETEKGAYVFFRK- 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R D+L ++ ++ +P P+ MRW +P ++RP+ ++ +L +DA Sbjct: 119 RVGGEAARDLLPPLLAALVRDLPAPRKMRWGEVETP-----FLRPVAWLVALL--DDA-- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + G T GHRF P+ ++ + Y LE A V+ DPE RR A L A Sbjct: 170 -VLPVTAAGVTAGRTTRGHRFLREAPVALEHAEAYEGALERAAVIADPEKRRAATLRAAC 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A GLELV D +LL+E+ L+E +GSFD++YL LP+E++ T+ +Q+ F TR Sbjct: 229 EAAQQGGLELVCDPELLDEVANLIEIPVAILGSFDERYLSLPDEVLATTMIHHQRFFPTR 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G LA F+ VSN D A + +G + RL DA FW+ D++ SL + Sbjct: 289 RPGGSLAPSFVGVSNNDVPD-KAVVRRGYEGALNPRLFDASFFWEADRSR-----SLSQH 342 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 A + + FH +GT ++V+R V +A+L+ + + A Sbjct: 343 AWGLS-----------------GIGFHKGLGTVADKVARTHVAATALAKLVGLEEPERAA 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP---RGPLEN 467 ++ A+ + KADL T++V E PEL+G IG+ YA+ + +E ++P GPL Sbjct: 386 LEGALPVFKADLSTQMVGELPELEGVIGRAYALAEGYPPEVAAVLEHGVRPVKAGGPL-- 443 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P+++ ++LAD+LD L+ F+A+ ++PSGS DP+ LRR L + RI+ +PL + Sbjct: 444 -PSSRAGAVLALADRLDKLLGFFALKQRPSGSADPFGLRRDALAVARILNAQGWRVPLGE 502 Query: 528 FIEDQNLIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 F+ L F DR+ L +R L A++ + ++T Sbjct: 503 FVRTAAAGLAEAKKPPLTDEVIAEVEAFIWDRVTGLLEAEGVRPALARAVIA-DGPPVIT 561 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 L + + + L KR + K+ E + +I+P+ E LY Sbjct: 562 AARRAHLLRALSADPEFAQLLQLYKRAANL----AKQGAEDA-DINPKRFSSPYEAPLYD 616 Query: 630 VISDFGTHIQESMDHKR------------YHQIGDLLH-----SICEPIEIFFDQVLVNV 672 I + E + R +G L ++ +P++ F D VLV V Sbjct: 617 AIPPAKAALGELLAAVRSRLAPWDLGEGPAQGVGPLTGLAAVLALKKPLDAFLDNVLVMV 676 Query: 673 DDREVRDNRLSLLQYIK 689 +D VR NRL+LL + Sbjct: 677 EDEAVRRNRLALLGEVS 693 >gi|315166399|gb|EFU10416.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1341] Length = 694 Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 367/734 (50%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEVKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEDEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQ 674 Query: 685 LQYIKNIILIVINV 698 L I + L + ++ Sbjct: 675 LMQIAKMALSIASL 688 >gi|327482932|gb|AEA77339.1| Glycyl-tRNA synthetase beta chain [Vibrio cholerae LMA3894-4] Length = 688 Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|149007254|ref|ZP_01830912.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|307126956|ref|YP_003878987.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae 670-6B] gi|147761058|gb|EDK68026.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|306484018|gb|ADM90887.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae 670-6B] gi|332074227|gb|EGI84704.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA17545] Length = 678 Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 345/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|120602312|ref|YP_966712.1| glycine--tRNA ligase [Desulfovibrio vulgaris DP4] gi|226737049|sp|A1VCW9|SYGB_DESVV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120562541|gb|ABM28285.1| glycyl-tRNA synthetase beta chain [Desulfovibrio vulgaris DP4] Length = 696 Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 218/719 (30%), Positives = 342/719 (47%), Gaps = 69/719 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+PAR +L+ L + G+ + TP R + + ++ Sbjct: 1 MSQFVLEIGTEELPARFLPALERELAERFTRALADAGIECDPVCVMSTPRRAVVRMDAVN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E E GP G KA +GF R+ G++ ++ D KG+ Y+AV Sbjct: 61 PVQSESEEVVTGPPARIAFTPEGGLTKAAEGFARTQGVEVADIFRLTTD--KGE-YIAVR 117 Query: 114 R--KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R I D+L+ I P I +P+PK MRW + F++ RP++ +L + Sbjct: 118 KHMGGARSI-DLLRDICPAIIGALPFPKRMRWGSGD-----FTYARPMRWLLALF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILN 230 E ++D ++ + GNITYGHR H P+ V Y R + E+ V E RRNA++ Sbjct: 167 DESVVDFEVGGVRSGNITYGHRIHGAGPLTVAHAGDYERVIREQGGVTPVGEERRNAVVT 226 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + LA+A G +++ LL+E+ GLVE +G+ D +L LP E++ +++++QK F Sbjct: 227 GGNTLATAAGGKVIWKDSLLDEVQGLVEHPVPCLGNIDPSFLELPREVLLTSMESHQKSF 286 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 EG L F+ V N+ DG + +G RV+ ARLEDA FWK Sbjct: 287 GVEDAEGRLMPHFLTVLNLTPLDG-DLVRKGWERVLRARLEDARFFWK------------ 333 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 DL+ D +A LD +V+F +G+ G++ R+ L +A + D A Sbjct: 334 --------TDLASSFDAWLASLD--NVIFLGPLGSMGDKTRRLEQLCAWLASEVGFDDAT 383 Query: 411 VD-RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSK DL + +V EF LQG +G YA E + AI E P GP VP Sbjct: 384 AAARAGRLSKGDLVSGMVGEFDTLQGIMGGIYARRMGEAEAVAAAIAEQYLPAGPDSPVP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 ++ +S+ADK DTL + + P+G+ DPYALRR LGI RIILE+ + + + Sbjct: 444 SSMCGALLSIADKADTLAGCFGLGMIPTGAADPYALRRCVLGIARIILEHGLQLDVRGLF 503 Query: 530 ----------------EDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED + L FF RL+ L+EA+L D++ + Sbjct: 504 AKAFALYGERAWKLAPEDALVKLDEFFMARLRNLFIANGYETLLVEAVLAAGCDDVRSAG 563 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL--EAEKRLYA 629 ++ L F +L+ KR I+ ++ + +++L+ + + LL +AE+ L A Sbjct: 564 ARLEALAAFSRRDDFASAVLTFKRAANIIR-KQGGDSDVALDGAWKADLLVEDAERHLAA 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + Y + LL + ++ FF+ V+V DD +R NRL+LLQ + Sbjct: 623 SLEAMFPRFDGLWAEGDYPALFGLLGELRPVVDGFFEGVMVMSDDAALRTNRLNLLQAL 681 >gi|227510291|ref|ZP_03940340.1| glycine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189943|gb|EEI70010.1| glycine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 693 Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 209/732 (28%), Positives = 351/732 (47%), Gaps = 77/732 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI EEIPA + + L LK++ + + ++ + TP RL LY+ GL+ Sbjct: 4 NFLLEIGLEEIPAHVVTPSINQLKKRASDYLKDQRITFDQIKTFSTPRRLTLYITGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ + GP G KA GF R G T D K+ KG Y+ V + Sbjct: 64 QPDIDKSVKGPAKKIAQDTDGNWTKAAIGFSRGQG-ATTDDITFKE--VKGTDYVFVEKH 120 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +++VL + V I + +P M+W+ +F ++RP+K ++ +L +K Sbjct: 121 IAGKSVDEVLTGMKDV-ITAMTFPTMMKWANY-----SFEYVRPIKWLVALL-----NDK 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + ++ +T GHRF +++ + D Y L + V+ D + R+ I+ H+ Sbjct: 170 VIPFSILDVSTDRVTSGHRFLGKD-VELANADEYEEKLTQQFVIADAKKRKELIVKQIHK 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ D DLLEE+ LVEW F G F+ KYL +P+E++ ++K +Q+ F Sbjct: 229 IAEDNDWQINLDPDLLEEVNNLVEWPTAFAGKFNDKYLKIPDEVLITSMKDHQRFFYVTN 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V N D ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 289 GDGTLLPHFISVRNGNDYDI-QNVIAGNEKVLTARLEDAMFFYEEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV----LGKKIAQLIDADVAL 410 K + + + RL V FH KI T E++ R++V LGK+ D ++ Sbjct: 335 -------KKTIAEDVERLKK--VSFHDKISTMFEKMQRVQVISNYLGKQFG-FSDKELED 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 385 EQRAAEIYKFDLVTGMVGEFAELQGVMGEKYALLNGEAPAVAKAISEHYMPISANGALPA 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + + ++++DKLD+++ F+A PSGS DPYALRR GI+RI+ + + L Sbjct: 445 SNVGALLAVSDKLDSILTFFAAGMIPSGSNDPYALRRQATGIVRIVADKNWNFDLIDTLK 504 Query: 529 ----IEDQNLIL--------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ++D+ + F DR+K YL D IR+D+ +A+ ++L Sbjct: 505 AIINLQDKKQVAPKLDQAGQITAVSDFIKDRIKQYLDDLGIRYDISDAVTSGSQTDILFN 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + + L E + + S R+ +I K+ ++ ++ S E+EK L Sbjct: 565 ISSGQVLQEQKDDDAFKSIIESLTRVLRISKKGHFKDNDLVVDGS--LFENESEKVLNQK 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ E + + D L + + I +FD +V D ++RDN L L + + Sbjct: 623 VASAAEGYYEISAKEDF----DRLSGLKDAINAYFDATMVMDKDEKLRDNHLRQLTLLSH 678 Query: 691 IILIVINVQKIV 702 +IL + ++ K+V Sbjct: 679 LILHLGDLDKLV 690 >gi|83719744|ref|YP_441141.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis E264] gi|167617966|ref|ZP_02386597.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis Bt4] gi|257140197|ref|ZP_05588459.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis E264] gi|83653569|gb|ABC37632.1| glycyl-tRNA synthetase, beta subunit [Burkholderia thailandensis E264] Length = 699 Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 204/683 (29%), Positives = 335/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGLQ----TIS 95 +Y TP RL + ++ + +PE+ + E++ P A GK + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPERQVREKVLPVSVALDAQGKPTAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + + L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKAEAFFVNYASPGATLAEGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I G+ T GHRF + + +Q + Y L ++ Sbjct: 169 VRPVHRLSAL-----HDDRIVPVCAFGIDAGDTTLGHRFLSDGLVAIQHANAYADTLRDK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 VL R+ AI A A+A G ++V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVLAHFAGRKEAI--RAQLEANAGGDQVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPDE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL R+ L +VV+H K+G+Q R+ R+ Sbjct: 341 FFFEQDKK--------------------KPLADRVPLL--ANVVYHNKLGSQLARIERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD + RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 TLAGEIAPAIGADATVAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEAEDVAIA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CSEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + I FF +RL+ L +R ++A+ Sbjct: 499 LLLEKQLPLDLVWLLRTTYERFAAVPDVAESTDAIHAFFVERLRGLLRERGYTAGEVDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L L IV + + EF A+ E + KRI IL +K + + P Sbjct: 559 LSLNPTRLDDIVARLDAVREFTRLAEAEALAAANKRISNIL---KKSESGANGAVQPALF 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L +++ +Q ++ + Y L ++ P++ FFD V+VN +D +R Sbjct: 616 VEAAEKALAEQLAEVTPRVQSQLEARAYTGALSALAALRAPVDAFFDGVMVNAEDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|260774987|ref|ZP_05883887.1| glycyl-tRNA synthetase beta chain [Vibrio coralliilyticus ATCC BAA-450] gi|260609077|gb|EEX35236.1| glycyl-tRNA synthetase beta chain [Vibrio coralliilyticus ATCC BAA-450] Length = 688 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 205/699 (29%), Positives = 331/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGADLAHEGVKWYAAPRRLALKVTALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 QADKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVEQADRLVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQATSEIVVDLAAKALGNLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++S + Y LEE V+ D E R+ IL D+ + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILADSQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ IDADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIDADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDELPSTGIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 449 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDHLTNDNVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLANRPTKPSDFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ +I L +AEK L + ++ Sbjct: 568 FRELEAAEALAAANKRVGNILA---KFDGELAADIDLSLLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQQALSKLADLREPVDSFFDNVMVMADDEALK 663 >gi|329572238|gb|EGG53898.1| glycine--tRNA ligase, beta subunit [Enterococcus faecalis TX1467] Length = 694 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 216/735 (29%), Positives = 363/735 (49%), Gaps = 89/735 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTCPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLS 683 K LY ++D + Y + +L P I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVNDLSEAFATRTIAENYEALVNL-----RPLIDAYFNETMVMVEDEKVKQNRLK 673 Query: 684 LLQYIKNIILIVINV 698 L I + L + ++ Sbjct: 674 QLMQIAKMALSIASL 688 >gi|238750267|ref|ZP_04611769.1| Glycyl-tRNA synthetase beta subunit [Yersinia rohdei ATCC 43380] gi|238711500|gb|EEQ03716.1| Glycyl-tRNA synthetase beta subunit [Yersinia rohdei ATCC 43380] Length = 689 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 203/718 (28%), Positives = 330/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVIWYAAPRRLAVKVLNLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDEAERLVTDKGEWLLYRAHVKGQ 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E ++ Sbjct: 126 SAQL--LLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSELIPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 179 GID-----SDRVIRGHRFMGEAEFTLDNADQYPQVLMERGKVIADYELRKAIIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDT 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGNLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN DL K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDLKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + D D I+A+L +K + F Sbjct: 511 YGSKLTNAKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K +++ + L AE +L + ++ Sbjct: 571 RTLDAAATLAAANKRVSNILA---KSTDKLNDHVHASVLKEPAELKLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 VFAAGQYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADI 685 >gi|114045521|ref|YP_736071.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. MR-7] gi|122945101|sp|Q0I0U1|SYGB_SHESR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|113886963|gb|ABI41014.1| glycyl-tRNA synthetase, beta subunit [Shewanella sp. MR-7] Length = 688 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 213/699 (30%), Positives = 337/699 (48%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAAWYAAPRRLAINVTELAIA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D + VY A + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVDQAERLVTDKGEWLVYNAKVEG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 125 VE--TKSLIAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNVRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDDLLEEVTSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 292 EAGKLLPNFIFVANIESKDP-AQIIAGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 333 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L +Q Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIDVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K E+ I+ L AE+ L A +++ + Sbjct: 569 FRSLEASSALAAANKRVSNILA---KVEGELPTAINSALLAEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q LL S+ E ++ FF+ V+V DD ++ Sbjct: 626 PLFANADYQQALTLLSSLRESVDQFFEDVMVMADDEALK 664 >gi|254291119|ref|ZP_04961916.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae AM-19226] gi|150422964|gb|EDN14914.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae AM-19226] Length = 688 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASSRTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|262166791|ref|ZP_06034528.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus VM223] gi|262026507|gb|EEY45175.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus VM223] Length = 688 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 339/720 (47%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAKQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLNVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 STAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|153212966|ref|ZP_01948560.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 1587] gi|124116192|gb|EAY35012.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 1587] Length = 688 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVASLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFIIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAKEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|229530194|ref|ZP_04419583.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae 12129(1)] gi|229332327|gb|EEN97814.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae 12129(1)] Length = 688 Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 204/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I AD+ R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADMEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|322830761|ref|YP_004210788.1| glycyl-tRNA synthetase, subunit beta [Rahnella sp. Y9602] gi|321165962|gb|ADW71661.1| glycyl-tRNA synthetase, beta subunit [Rahnella sp. Y9602] Length = 689 Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 204/719 (28%), Positives = 337/719 (46%), Gaps = 63/719 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L L + + +++ + P RL L + GL Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANLTAELDAANLPHGDVKWFAAPRRLALKVSGLHESQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP V G KA +G+ R G+ ++ D + VY A ++ Sbjct: 66 ADREVEKRGPAVAQAFDAEGKPSKAAEGWARGCGITVDQADRLVTDKGEWLVYRAHVKGE 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++ ++ K+P PK MRW S ++RP+ ++ +L E KI+ Sbjct: 126 S--AQQLLPAMIATSLSKLPIPKLMRWGD-----SDVQFVRPVHTVTLLLGDELIPAKIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D GHRF + + D Y + L E V+ D E R+ I DA + Sbjct: 179 GID-----SARTLRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKALIKRDAEKA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AKEIGGIADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA+ I A+V RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALSGWIAEKIGANVENAKRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEQEEVAVALNEQYQPRFAGDELPASLVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +++ F R + + + D I+A+L +K ++ F Sbjct: 511 YGDKLTNEKVVDDVVDFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVSYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISDFGTHIQ 639 + + + KR+ ILA K+ ++ L+ +L E AE +L + ++ Sbjct: 571 RTLDEAATLAAANKRVSNILA----KSTDVLLDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E ++ FFD V+V ++ VR NRL+LL ++ + L V ++ Sbjct: 627 PLFAAGQYKEALVELAALRETVDTFFDTVMVMDENEAVRINRLTLLSKLRELFLQVADI 685 >gi|23099403|ref|NP_692869.1| glycine-tRNA ligase beta chain [Oceanobacillus iheyensis HTE831] gi|81846059|sp|Q8EPY2|SYGB_OCEIH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|22777632|dbj|BAC13904.1| glycine-tRNA ligase beta chain [Oceanobacillus iheyensis HTE831] Length = 692 Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 216/729 (29%), Positives = 357/729 (48%), Gaps = 76/729 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI EE+PAR A L L+E + +N+ Y TP RL +++K ++ Sbjct: 4 DVLIEIGLEELPARFIDDAELQLYTKTKQWLEENRISSENVISYSTPRRLAVFVKNMAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E+ GP + G KA GF + GL T D +++ KG Y+ V + Sbjct: 64 QSSIEEDVKGPALKIAKDEDGNWTKAAQGFTKGQGL-TTDDIVVRE--VKGISYIYVTKH 120 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R I+++L + I+ + + K+MRW + + RP++ ++ ++ E Sbjct: 121 IEGRPIQELLPEFKSI-IESITFGKNMRWGS-----ETIRYARPIRWLVAMMGNE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ + N+TYGHRF + +Q Y + L++ V++ + R I+ + Sbjct: 170 VIPFEIAHVATNNVTYGHRFLGEE-VTIQEPAEYEKTLKDNYVIVKAKDRETLIVEQLSK 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L G E+ D++LLEE+ LVE+ F+G F++ YL +P E++ ++K +Q+ F Sbjct: 229 LEREHGFEIPVDQELLEEVRNLVEFPTAFVGKFEEAYLEIPPEVLITSMKEHQRYFPVH- 287 Query: 295 REGVLANCFILVSNIQASDGG--AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++GVL F+ V N D + +GN +V+ ARL DA F+ D L + Sbjct: 288 KKGVLQPYFVGVRN---GDNYHIETVAKGNEKVLRARLADAEFFYNED---------LHQ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVA 409 S F L+K VVF K+GT ++V R++ + +I++ L D Sbjct: 336 SIDFFQEKLTK-------------VVFQEKLGTYSDKVERMKQIADRISEKLSLESDDRK 382 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +++RA +SK DL T +V EF ELQG IG++YA EN + AI+EH +P+ +++P Sbjct: 383 IIERAAEISKFDLMTSMVNEFTELQGIIGEKYANHFGENSATSQAIKEHYQPKHAKDDLP 442 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--------LENKI 521 I VS+ADKLDT+ A+ P+GS+DPY LRR I+RI+ +E I Sbjct: 443 QTVIGSVVSVADKLDTIAGCIAVGLVPTGSQDPYGLRRQASAILRILHNEKWNLTVEELI 502 Query: 522 DIPLSQFIE---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 DI L F + ++ LI FF R + D+ + D+I A+ + N+ + Sbjct: 503 DIALDVFQKSNVTIMEKTNEELIEFFRLRAVYLMKDKGLEVDVIHAVTDQKLGNVFVSFE 562 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K L++ E F + + ++L + K E + I L E+EK LY Sbjct: 563 KAKELSD---KRNDETFKPIQEALVRVLNLSNKV--ETNELIREDKLETESEKILYTRYL 617 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 D ++ + H Q L + PI FFD +V DD E+R+NRL+L+Q + ++I Sbjct: 618 DIKETYEKQLLHNETKQALATLAQLAAPIHAFFDNNMVMADDLEIRNNRLALIQALTSLI 677 Query: 693 LIVINVQKI 701 L +++KI Sbjct: 678 LPYADLRKI 686 >gi|257090597|ref|ZP_05584958.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis CH188] gi|256999409|gb|EEU85929.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis CH188] gi|315579043|gb|EFU91234.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0630] Length = 694 Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 216/735 (29%), Positives = 363/735 (49%), Gaps = 89/735 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVECPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------L 517 P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII L Sbjct: 443 PETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQL 502 Query: 518 ENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 503 QTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL- 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEAE 624 L N S + + F S + + +++ + KK +E+ + I P +AE Sbjct: 562 --SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLS 683 K LY ++D + Y + +L P I+ +F++ +V V+D +V+ NRL Sbjct: 619 KELYQAVNDLSEAFATRTIAENYEALVNL-----RPLIDAYFNETMVMVEDEKVKQNRLK 673 Query: 684 LLQYIKNIILIVINV 698 L I + L + ++ Sbjct: 674 QLMQIAKMALSIASL 688 >gi|153826405|ref|ZP_01979072.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-2] gi|149739791|gb|EDM53986.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-2] Length = 688 Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 206/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + +V Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADV 683 >gi|117918475|ref|YP_867667.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. ANA-3] gi|166227928|sp|A0KR42|SYGB_SHESA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|117610807|gb|ABK46261.1| glycyl-tRNA synthetase, beta subunit [Shewanella sp. ANA-3] Length = 688 Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 213/699 (30%), Positives = 337/699 (48%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D + VY A + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVDQAERLVTDKGEWLVYNAKVEG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 125 VE--TKSLIAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNVRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDDLLEEVTSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 292 DAGKLLPNFIFVANIESKDP-AQIIAGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 333 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L +Q Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIEVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K E+ I+ L AE+ L A +++ + Sbjct: 569 FRSLEASSALAAANKRVSNILA---KVEGELPTTINSALLAEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q LL S+ E ++ FF+ V+V DD ++ Sbjct: 626 PLFANADYQQALTLLASLRESVDQFFEDVMVMADDEALK 664 >gi|167579892|ref|ZP_02372766.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis TXDOH] Length = 699 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 204/683 (29%), Positives = 335/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGLQ----TIS 95 +Y TP RL + ++ + +PE+ + E++ P A GK + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPERQVREKVLPVSVALDAQGKPTAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + D K + + P + + L+ + + K+P PK M + + + Sbjct: 112 DLERAHD-GKAEAFFVNYASPGATLAEGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++I+ + I G+ T GHRF + + +Q + Y L ++ Sbjct: 169 VRPVHRLSAL-----HDDRIVPVCAFGIDAGDTTLGHRFLSDGLVAIQHANAYADTLRDK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 VL R+ AI A A+A G ++V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVLAHFAGRKEAI--RAQLEANADGDQVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETKTPDE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL R+ L +VV+H K+G+Q R+ R+ Sbjct: 341 FFFEQDKK--------------------KPLADRVPLL--ANVVYHNKLGSQLARIERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD + RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 TLAGEIAPAIGADATVAIRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEDIAIA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CSEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLI-LFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + I FF +RL+ L +R ++A+ Sbjct: 499 LLLEKQLPLDLVWLLRTTYERFAAVPDVAESTDAIHAFFVERLRGLLRERGYTAGEVDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L L IV + + EF A+ E + KRI IL +K + + P Sbjct: 559 LSLNPTRLDDIVARLDAVREFTRLAEAEALAAANKRISNIL---KKSESGANGAVQPALF 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L +++ +Q ++ + Y L ++ P++ FFD V+VN +D +R Sbjct: 616 VEAAEKALAEQLAEVTPRVQSQLEARAYTGALSALAALRAPVDAFFDGVMVNAEDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|253576086|ref|ZP_04853418.1| glycyl-tRNA synthetase beta subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251844429|gb|EES72445.1| glycyl-tRNA synthetase beta subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 693 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 210/734 (28%), Positives = 354/734 (48%), Gaps = 80/734 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI EE+PAR A E L + L+E + + + Y TP RL + +K ++ Sbjct: 4 DLLFEIGLEEMPARFIRAAMEQLKERTVKWLEESVIQHGAVEAYATPRRLAVLVKDVAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + EE GP G KA GF RS G S Q G Y+ V + Sbjct: 64 QEDVHEEVKGPSRKIALDENGQWSKAALGFARSQG---ASPEQFTFREVGGTEYVYVSKS 120 Query: 115 ----KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + L+ + L I +Q + +PK+MRW F ++RP++ ++ + Sbjct: 121 RIGVETSSLLAEGLLGI----LQAMNFPKNMRWGNYD-----FKFVRPIRWLVALF---- 167 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 + +I+L++ + N+T GHRF + ++ Y+ L V+ D R+ I N Sbjct: 168 -GKDVIELEIAGVKSDNVTRGHRFLGTETV-IEEPAAYVETLRSQHVIADVNERQALIQN 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA G + +DLLEE++ LVE V G+F++ +L +P+E++ +++ +Q+ F Sbjct: 226 QIEALAKEKGWHIAVKEDLLEEVLFLVETPTVLYGTFEESFLNIPQEVLITSMREHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L F+ V N + I +GN +V+ ARL DA F++ DQ Sbjct: 286 PVLNAQGNLLPYFVTVRNGNNTSLDV-IARGNEKVLRARLSDAKFFYEEDQK-------- 336 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L LSK + +VFH ++GT G++V RIR +K++ ++ D Sbjct: 337 ----LAIKDALSK----------LESIVFHEELGTIGDKVRRIRRNTEKLSAMLRTDTGT 382 Query: 411 VDRAIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + A + K DL T++V EFPELQG +G++YA E I EH +PR + Sbjct: 383 AEAAARTAEICKFDLVTQMVYEFPELQGVMGEDYARKAGEPEVVAKGIFEHYQPRFADDA 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS- 526 VP + + VS+ADK+DT++ ++I P+GS+DPY LRR GI++II+E+K+ + L+ Sbjct: 443 VPASTVGSIVSIADKIDTIVGCFSIGIIPTGSQDPYGLRRQAAGIVQIIVEHKLSVSLTD 502 Query: 527 ----------QF-----IEDQ---NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 QF ED+ +L+ FF R++ L D ++R+D+++A+L D+++ Sbjct: 503 IFKLALETHQQFRGLKRSEDEIMKDLMDFFGLRVRKTLSDENLRYDVVDAVLSAGYDDVV 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + V K L E + E+F + + ++ + K E ++ L AE+ LY Sbjct: 563 STVARGKALMEAVDTK--EEFKATVESFGRVSNLAAKATGE---KVRSDLLSEPAEQALY 617 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +E++ + +L+ + + I +FFD V+V +D +R NRL+LL I Sbjct: 618 EAWRSISDKYRETLASRDAAGALELIGGLKDAITVFFDAVMVMAEDDAIRTNRLALLAAI 677 Query: 689 KNIILIVINVQKIV 702 + + K+V Sbjct: 678 DEDLKAFADFGKLV 691 >gi|88608720|ref|YP_506631.1| glycyl-tRNA synthetase, beta subunit [Neorickettsia sennetsu str. Miyayama] gi|88600889|gb|ABD46357.1| glycyl-tRNA synthetase, beta subunit [Neorickettsia sennetsu str. Miyayama] Length = 696 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 208/731 (28%), Positives = 340/731 (46%), Gaps = 88/731 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI SEE+P +Q A + + K+ V + + + R+ + + + Sbjct: 1 MHKFLLEILSEEMPVALQSYAQKSFFDLFSSATKDLSV--GKIEVFTSCRRIAVLIDDVK 58 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + ++ GP VG+ ++ F S G T +D +K K + Y A + I Sbjct: 59 SDLVNQKVDKKGPSVGSDLSVVERFATSMGAST-ADLYLKSIGNK-EYYFAPVAGKVLHI 116 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D+++ ++ WP+SMRW + +WIRP+KSI+C+L + II + Sbjct: 117 DDIMRQRTEAILRSFSWPRSMRWGNY-----SLNWIRPIKSIVCML-----GKSIIPVQF 166 Query: 181 KEIPCGNITYGHRFH-APHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 G IT G A IK+ S + Y L + V+L R N I +L + Sbjct: 167 HHYTAGAITVGPYVDPALQKIKITSAEEYQSILMKGGVILSQIERENLIKEQISQLEAEH 226 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G + ++LL E++G+ E V +GSF + +L L E +I I ++QK F ++ G L Sbjct: 227 GFSVCVTEELLNEVVGITESPNVLLGSFPQSFLELHERIIETVIVSHQKVFPV-SKNGKL 285 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F+ VS+I G A ++G RV+ ARL DA D N Sbjct: 286 LNKFVFVSSI----AGDAPIRGYERVITARLADAASMVLIDSKN---------------- 325 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLS 418 PL + +L L +FH K+G+ E+V R+R L K IA + +A + V+ A L+ Sbjct: 326 ----PLRELSPKLKQL--IFHKKLGSFSEKVQRVRALAKFIAFWVPNASIIKVEEAAKLA 379 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNE-NISCCDAIEEHLKPRGPLENVPTNKISITV 477 K DL T VR+FP+L G +G L E ++ DA+ +H P + PT +++T+ Sbjct: 380 KLDLLTTFVRDFPKLAGFMGSHCLSLCGETDVEIIDAVRDHYLPVDAADICPTAPVTVTL 439 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------- 529 +LADK+DTL+ ++ EK + ++DP +RRA +G++RII+ENK+D+PL F+ Sbjct: 440 ALADKIDTLVGLISVKEKVTSTRDPLGIRRAAIGVLRIIIENKLDVPLQVFLMKAIDLYP 499 Query: 530 -----------------EDQ------NLIL-FFHDRLKLYLHDRDIRHDLI----EAILR 561 E Q N L FF +RLK L + + + R Sbjct: 500 SSLFFSLIKKIGASSDEEKQRKDDVVNFTLSFFSERLKALLFKSGVSQAVFASVSSGVTR 559 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 P L + + ++E+ A+G +F+ KR+ IL + + + S + L+L Sbjct: 560 P-----LVLTEKCIAISEWLKQAEGAEFMRLHKRMMGIL---KGFSGSAKAKFSKKVLVL 611 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 E L F + ++ + + + +PI +F D VLVNV+D E++ NR Sbjct: 612 PEEVSLVQEFEGFQSLFCNAIKERNFEMAFSRCADLLKPITVFMDSVLVNVEDPELKKNR 671 Query: 682 LSLLQYIKNII 692 + LL I + Sbjct: 672 IGLLLSISETL 682 >gi|323481396|gb|ADX80835.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis 62] Length = 694 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 218/737 (29%), Positives = 364/737 (49%), Gaps = 93/737 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QADIEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEVKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTSLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 K L + +V FH KIG+ E++ R+ + IAQ+I V L + Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVAL----IAQIIGLKVGLSE 379 Query: 413 -------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P Sbjct: 380 EELEDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSE 439 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--------- 516 +P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII Sbjct: 440 GELPETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPL 499 Query: 517 --LENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 L+ ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E Sbjct: 500 VQLQTEVDEAVNQDVEKYGVLLKEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQA 559 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLL 621 +L L N S + + F S + + +++ + KK +E+ + I P Sbjct: 560 DL---SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFEN 615 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 +AEK LY ++D + E+ + + + L ++ I+ +F++ +V V+D +V+ NR Sbjct: 616 KAEKELYQAVND----LSEAFATRTIAENYEALVNLRPLIDAYFNETMVMVEDEKVKQNR 671 Query: 682 LSLLQYIKNIILIVINV 698 L L I + L + ++ Sbjct: 672 LKQLMQIAKMALSIASL 688 >gi|311087596|gb|ADP67675.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 682 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 215/706 (30%), Positives = 344/706 (48%), Gaps = 72/706 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 7 LIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDID---- 62 Query: 65 EKIEERL------GPRVGAGKKAIDGFLRSTGLQTISDC------QIKKDPKKGDVYLAV 112 I ER GP + DGFL + + C I+ +KG+ Sbjct: 63 --ITERFVEIKKRGPSIINSYDK-DGFLTEAATRWLKHCGININQAIRLKNEKGEWLFYK 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 RK + IE ++ I A++ + KSMRW + S RP+++I+ +L Sbjct: 120 TRKKQENIESLIPKITESALKNISIKKSMRWGQDNQKFS-----RPIRNIVILL-----D 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 +K+I D+ I N+ H IK++ Y + L E+ ++ D R+ I+ D Sbjct: 170 KKVIPGDVFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIED 229 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 230 IENIAKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFP 289 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 290 IYNSEKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDR---------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV Sbjct: 339 ----------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDS 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P Sbjct: 387 IRAALLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCT 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 447 PIGCGLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKK 506 Query: 531 ---------DQNLIL------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++LIL FF RL + + +I+++L ++ L+ I I+ Sbjct: 507 SLSLYNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQ 566 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F Sbjct: 567 AISFFKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFD 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + + K+Y+ I + S PI FF +V + D ++R NR Sbjct: 624 NYTKNLFLEKKYNDILIKIKSFENPIYNFFKKVKIYHSDSKIRLNR 669 >gi|322436213|ref|YP_004218425.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9] gi|321163940|gb|ADW69645.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9] Length = 693 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 202/709 (28%), Positives = 338/709 (47%), Gaps = 54/709 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKG 58 M DFL EI EE+PARM +A +L +GLL+ E ++ + + Y TP RL + +KG Sbjct: 1 MADFLFEIGLEEVPARMIAQAEAELLKRTVGLLERERLVAGAVEAKSYSTPRRLAVVVKG 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE LGP G A F + G++ +S ++ + KG+ A Sbjct: 61 VLARQEDVSEEVLGPATKIAFKDGQPGPAAVAFAKKNGVE-VSALRVVTN-AKGEYVAAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K R VL +P I + W K+M W ++RP++ ++ +L Sbjct: 119 SVKAGRSAAAVLAEELPKEIAGIYWAKNMYWRAGRPE----RFVRPVRWLVALL-----G 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ + G +TYGHR + Y+ +L +A V++D E RR+ I Sbjct: 170 DEIVPVSFGGYEAGRVTYGHRVLFGDAAIAVTPASYVEELAKASVMVDVEGRRHVIRKAL 229 Query: 233 HRLA-SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ++ +A G ED L++++ + EW V +G F+K+YL LPEE++ ++ +Q F Sbjct: 230 DKVCRTAEGTRWREDHGLVDKMTHMTEWPSVILGGFEKEYLALPEEVLVTVMRDHQNYFA 289 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + +G LA F+ V N A + G A+++ GN RV+ AR DA FW+ DQ Sbjct: 290 VESADGKLAPHFLAVLNTVADETGQAVIRHGNERVLRARFNDARFFWEFDQR-------- 341 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVA 409 PL++R+A L+ +V F +G+ + R+ L +A + D+ Sbjct: 342 ------------VPLEERVALLE--NVTFQKDLGSYAAKSVRVGALALSLAATVPGVDLE 387 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + A L+K DL TE+V+EF ELQG++G YA Q + C+AI + +P + +P Sbjct: 388 ALKAAARLAKTDLTTELVKEFTELQGEVGGLYAEAQGVAQAACNAIYDQYRPVSTEDRIP 447 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +++ADK DT+ + + +P+GSKDP+ALRRA GI++I+ E + + Q + Sbjct: 448 RTVEGQLLAMADKADTIAGMFGLGLEPTGSKDPFALRRAANGIVKILGEGATGLGIGQVV 507 Query: 530 E---DQNLIL------FFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 NL+L FF +RL+ YL + + +D++ A+L D++ V + + Sbjct: 508 RAAVGDNLVLVRKLEVFFAERLEFYLREAKGQAYDVVAAVLGAGADDVRDAVARAEAVTA 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 S + KR+ ILA +K + L AE L ++ + Sbjct: 568 VRGSEDFAAVSAAFKRMKNILAQAAEKGIAPGTAVDISLLKDGAELALAEKAAEVKPEVA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 Y +L+ ++ + FF+ V+V D VR NRL+LL + Sbjct: 628 ALRGAHEYRGALELIATLRPQVNAFFEAVMVMDPDEAVRANRLALLGKV 676 >gi|168492544|ref|ZP_02716687.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC0288-04] gi|183573302|gb|EDT93830.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC0288-04] Length = 678 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 346/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+ S Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIHSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + T I ++ Q Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVE---TLILSGPASQQLKQ 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|294338462|emb|CAZ86788.1| glycine tRNA synthetase, beta subunit glyS [Thiomonas sp. 3As] Length = 721 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 185/609 (30%), Positives = 308/609 (50%), Gaps = 54/609 (8%) Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + L+ + AI K+P PK M + + ++RP ++ + A+ + Sbjct: 144 PGATLAEGLQKALAEAIAKLPIPKVMAYQLEDG-WTTVKFVRPAHGLVALHGAD-----V 197 Query: 176 IDLDLKEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 + + + G T+GHRF A PI ++ D Y L E+ V+ + RR I Sbjct: 198 VPVQALGLTAGRETHGHRFEAQADPIVLRDADSYADQLREQGAVIASFDARRAEIAAQLQ 257 Query: 234 RLAS--AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A GL ++D LL+E+ LVE V + FD +L +P+E + LT+K NQK F Sbjct: 258 AAARQAGPGLHPIDDAALLDEVTALVERPNVLLCQFDPAFLAVPQECLILTMKANQKYFP 317 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L + F++VSNI +D +A+++GN RVV RL DA F+++D+ Sbjct: 318 LLDAAGKLTHRFLVVSNISPADP-SAVIEGNERVVRPRLADAQFFFEQDRK--------- 367 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VA 409 K L+ R+ LD VV+HA++G+QGER+ R++ L IA+ I V Sbjct: 368 -----------KRLEDRVPGLD--KVVYHARLGSQGERMRRVQALAGGIARQIPPSFPVE 414 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +RA +L+K DL T++V EFPELQG +G+ YA E+ +AIE+H KPR +++P Sbjct: 415 QAERAALLAKTDLLTDMVGEFPELQGIMGRYYAAHDGEDARVAEAIEDHYKPRFSGDDLP 474 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LADK +TL+ + I E+P+G KDP+ALRR TLGI+R+++E I LS+++ Sbjct: 475 RSDVGFALALADKTETLVGLFGIGERPTGDKDPFALRRHTLGILRMLMERGQGIELSRYL 534 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 E+ ++ F +DRL L ++ ++A+L L + + Sbjct: 535 ENAVPVFSGVAGFSDPSADVQTFLYDRLANLLREQGWTAQEVDAVLALSPQILANVPRRL 594 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRLYAVISD 633 + + F + + + KR+ IL E LL+E AE L ++ Sbjct: 595 EAVRAFAALPEAAALAAANKRVGNILRKSEGAKDGSGFNAD---LLVEPAEIALSQALNA 651 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q+ Y +L ++ P++ FFDQV+VN +D +R NRL+LL ++ + Sbjct: 652 VAPQVQQFYAAGDYTAALKMLAALKVPVDTFFDQVMVNAEDPALRANRLALLARLQEAMN 711 Query: 694 IVINVQKIV 702 V ++ ++ Sbjct: 712 QVADLSRLA 720 >gi|153802495|ref|ZP_01957081.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-3] gi|124121965|gb|EAY40708.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-3] Length = 688 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DSSKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|323697788|ref|ZP_08109700.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. ND132] gi|323457720|gb|EGB13585.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio desulfuricans ND132] Length = 702 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 218/727 (29%), Positives = 352/727 (48%), Gaps = 83/727 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F+LEI +EE+PAR K A +L L E V ++ Y TP R+ ++ L+ Sbjct: 1 MAEFILEIGTEEMPARFVPKLAAELEEAFAKGLTESMVENGGVKCYATPRRITAHVPSLA 60 Query: 61 PHSPEKIEERLGPRV-----GAGK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP V G G KA GF ++ G+ D + + KG+ YLA Sbjct: 61 LAQLSQEETVTGPPVRIAYDGDGNLTKAGQGFAKTQGVA--EDALFRMETDKGE-YLAAK 117 Query: 114 RK--PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R I D+L + I+ + +PK M W F++ RP++ +L +L A+ Sbjct: 118 KTVGGGRTI-DILPALCVKCIESLSFPKRMHWGDYD-----FTFGRPVRWLLALLDAD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY---IRDLEEAMVLLDPECRRNAI 228 +++ L+ + G T GHR P P V S Y +RD + V++DP RR I Sbjct: 170 ---VVEFTLENLTSGRETRGHRVMGPGPFSVASSADYFSVVRD--QCKVVIDPVERRETI 224 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + +RLA A+G +V + LL+E+ LVE+ + +G D YL LP E++ +++++QK Sbjct: 225 VAEGNRLAQALGGSIVWNDGLLDEVANLVEYPKPLIGDIDPLYLALPREVLLTSMQSHQK 284 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L F+ N++ D A + +G RV+ ARLEDA FW+ D Sbjct: 285 SFGLEGADGRLLPHFLTTLNLEPLDV-ALVKKGWERVLKARLEDARFFWEAD-------- 335 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 ++F+ L K + VVF +G+ G++ RI L +K+A+ +DA Sbjct: 336 ----CEVEFDTWLEK----------LEHVVFLGPLGSVGDKSRRIETLCRKLAETLDASQ 381 Query: 409 ALV-------DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 +++ RA L+KADL +E+V EF LQGK+G YA I E P Sbjct: 382 SILPGEIEQYARAGRLAKADLVSEMVIEFDSLQGKMGGIYAERAGLGEIVSKGIYEQYLP 441 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 GP VP++ VS+ADK DT+ + + + P+G+ DPYALRR LGI RII+E+ + Sbjct: 442 AGPDTPVPSSLSGALVSMADKADTMAGCFGLGKVPTGANDPYALRRCALGISRIIMEHDL 501 Query: 522 DIPLSQFIE-------------DQN-----LILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 D+ L F++ +QN L+ FF RL+ + +++A L Sbjct: 502 DLDLEAFLKAAQKAYSGVKWKVEQNEALDKLLDFFAQRLRALFTGQGFDTRVVDAALGAG 561 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY----L 619 +++ T+ + L EF A E+ +L+ KR I+ K+ E ++ Y Sbjct: 562 FNDIRTLKARLDALAEFSRGADFERSVLTFKRAANII---RKQGDEAGEPLTGSYDADLF 618 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 E E A + + + +++ + + LL + ++ FFD V+V D +VR Sbjct: 619 EDEHETAFGAKLDELAPRFDDLWENRDFGGLFGLLGELRPAVDGFFDHVMVMCDAPDVRL 678 Query: 680 NRLSLLQ 686 NRL+LL+ Sbjct: 679 NRLNLLK 685 >gi|226327616|ref|ZP_03803134.1| hypothetical protein PROPEN_01487 [Proteus penneri ATCC 35198] gi|225204142|gb|EEG86496.1| hypothetical protein PROPEN_01487 [Proteus penneri ATCC 35198] Length = 690 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 194/723 (26%), Positives = 338/723 (46%), Gaps = 70/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + ++ + P RL + + ++ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNANITHGDVSWFAAPRRLAIKVANMAKSQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + Y A ++ Sbjct: 66 ADRTIEKRGPAIAQAFDAEGKPTKAAEGWARGNGITVDQAERLSTDKGEWLFYRAEVKG- 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L + +I Sbjct: 125 -EAVNQLLIGMVSTALSKLPIPKLMRWGDKET-----HFVRPVHTVTLLL-----GDTVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 D ++ I + GHRF + + D Y L E V+ D E R++ IL+DA Sbjct: 174 DGEILGIQSDRVIRGHRFMGEAEFTIDNADQYPEILYERGKVIADYETRKSIILHDARLA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G L+EE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 234 AEKLGGIADLSDSLVEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 +G L FI V+NI++SD I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 QGGLLPNFIFVTNIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F +GT ++ RI+ L IA + DV Sbjct: 352 --------------------------VLFQKDLGTLRDKTDRIQALAGFIAGKMGTDVNK 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A++E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVALKEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++A+K+DTL + I + P G KDP+ALRRA+LG++RII+E + + + + + Sbjct: 446 NPVASALAIAEKMDTLAGIFGIGQHPKGDKDPFALRRASLGVLRIIVEQDLPLDIEELTQ 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + + D I+A+L +K Sbjct: 506 EAVRLYGEKLTNKNVVSDVVEFMLGRFRSWYQELGYSIDTIQAVLARRPTQPADFNARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ ILA + N +++ + L E +L A +S Sbjct: 566 AVTYFRTLEEAAALAEANKRVSNILA--KSANVKLNDTVLASVLKAPEEVQLAANLSVLQ 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + ++Y + L S+ + + FFD+V+V +D VR NRL++L ++ + L V Sbjct: 624 DKLAPLFAERKYQEALVELASLRDVVNNFFDKVMVMDEDEAVRINRLTMLSQLRELFLKV 683 Query: 696 INV 698 ++ Sbjct: 684 ADI 686 >gi|270264147|ref|ZP_06192414.1| glycyl-tRNA synthetase, beta subunit [Serratia odorifera 4Rx13] gi|270041796|gb|EFA14893.1| glycyl-tRNA synthetase, beta subunit [Serratia odorifera 4Rx13] Length = 689 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 204/718 (28%), Positives = 326/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDSANLEHGEVSWFAAPRRLALKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + +L +V A+ K+P PK MRW S ++RP+ ++ +L AE +I Sbjct: 124 GQSAQALLAGMVSTALSKLPIPKLMRWGD-----SEVQFVRPVHTVTLLLGAE-----LI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 174 PGTVLGIESARTLRGHRFMGEAEFTIDNADQYPQILLERGKVIADYEARKALIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQQIGGKADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPESLVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 ++++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 SLAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R + + + D I+A+L +K + F Sbjct: 511 YGSKLSNAKAVDEVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVTHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 571 RTLEEAAALAAANKRVSNILA---KSTDTLNDRVHAAVLKEAAEIQLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y L ++ EP++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 VFAAGDYQDALVQLAALREPVDAFFDNVMVMAEDDAVRVNRLTLLSKLRELFLQVADI 685 >gi|329667247|gb|AEB93195.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii DPC 6026] Length = 690 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 210/734 (28%), Positives = 352/734 (47%), Gaps = 83/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF+R G+ T I + KG Y V ++ Sbjct: 64 QEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 121 KEGKKASDILMGMSDI-VKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLGDSVV-LANADDYEEALKSQYVIANADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFISVRN-GNSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + D ++ Sbjct: 335 -------KYPLTHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDTEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P +P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGEDENVSVAIKESYMPTSAEGELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ + Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLPE 505 Query: 530 -----------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E +N I F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N +I +E+ LYA + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRNAN---DIDESLFQDVSEEELYAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + S I DL E I +F+ ++ D +V++NRL+ L + Sbjct: 623 NALEANTDLS--------IADLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKV 674 Query: 689 KNIILIVINVQKIV 702 N+ + ++ K+V Sbjct: 675 NNLADRMGDLSKLV 688 >gi|297581946|ref|ZP_06943866.1| glycyl-tRNA synthetase [Vibrio cholerae RC385] gi|297533813|gb|EFH72654.1| glycyl-tRNA synthetase [Vibrio cholerae RC385] Length = 693 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 206/725 (28%), Positives = 341/725 (47%), Gaps = 69/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLAN-----CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 + + AN FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 SHKMGDANKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF------------ 337 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 --------FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADV 387 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +L+K DL T +V EF + QG +G YA E A+ E PR + + Sbjct: 388 EKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDEL 447 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L Sbjct: 448 PSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDL 506 Query: 529 IE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 I +Q +I F R + D D+I+A+L Sbjct: 507 IAKAKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 567 VKAVSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEI 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L Sbjct: 624 MAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFL 683 Query: 694 IVINV 698 + ++ Sbjct: 684 QIADI 688 >gi|157368319|ref|YP_001476308.1| glycyl-tRNA synthetase subunit beta [Serratia proteamaculans 568] gi|166980041|sp|A8G7U0|SYGB_SERP5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157320083|gb|ABV39180.1| glycyl-tRNA synthetase, beta subunit [Serratia proteamaculans 568] Length = 689 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 203/718 (28%), Positives = 325/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAEAFAANFTAELDSANLEHGEVSWFAAPRRLALKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + +L +V ++ K+P PK MRW S ++RP+ ++ +L AE ++ Sbjct: 124 GQSAQALLAGMVSNSLAKLPIPKLMRWGD-----SDVQFVRPVHTVTMLLGAELIPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 179 GID-----SARTVRGHRFMGEAEFTIDNADQYPQILLERGKVIADYETRKAMIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 ASTIGGKADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPESLVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 ++++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 SLAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLTLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R + + + D I+A+L +K + F Sbjct: 511 YGSKLTNAKVVDEVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVTHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 571 RTLEAAAALAAANKRVSNILA---KSTDTLNDRVHASVLKEAAEIQLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y L + EP++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 YFAAGNYQDALVELADLREPVDAFFDNVMVMAEDEAVRVNRLTLLSKLRELFLQVADI 685 >gi|320529362|ref|ZP_08030450.1| glycyl-tRNA synthetase, beta subunit [Selenomonas artemidis F0399] gi|320138328|gb|EFW30222.1| glycyl-tRNA synthetase, beta subunit [Selenomonas artemidis F0399] Length = 687 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 213/735 (28%), Positives = 332/735 (45%), Gaps = 88/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA ++ + +L E+ + Y +R TP R+ L + G + Sbjct: 4 DLLLEIGTEEIPAHAMPNLLREMKRLAGEMLTEQRISYDEIRTLGTPRRMALIVTGAAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP + G KA GF R G + I++D G VY AV Sbjct: 64 QADVNTETRGPAISIAFDADGNPTKAGAGFAR--GQHVAPEDLIRRD---GYVYAAVHET 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 E +LK ++P I+ +P P SMRW F +IRP++ I+ + + + Sbjct: 119 GAPTAE-ILKELLPALIRAIPLPNSMRWGDLD-----FRFIRPIRWIVALYGTD-----V 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L E+ GN + GHR AP + S Y E A +++DP RR I Sbjct: 168 VPFTLAEVTSGNRSRGHRTLAPEDFTITSAADYETACEAAYIIVDPVRRRAMISEQIADA 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGA----AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N GG + GN RV+ ARL DA F+ D+ +L Sbjct: 288 DGSLLPVFITVRN-----GGREHLDVVAHGNERVLRARLADAQFFFDEDRKK-----TLA 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---- 407 E K + VVF +G+ E+ R+ L + + + A Sbjct: 338 EHREKLHT-----------------VVFQQGLGSMYEKTERLAQLAASVVEDMTAGDDAA 380 Query: 408 ----VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 A RA LSKADL T +V EF ELQG +G+EYA+L E AI+E PR Sbjct: 381 YETMAADARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGEKPEVARAIDEQYMPRF 440 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P + + +S+ADK+D ++ ++ + P+GS+DP+ LRR LG++ +++ ++ I Sbjct: 441 AGDALPESDLGFALSVADKIDNIVGTFSRGKIPTGSQDPFGLRRQALGLVNMLILHESGI 500 Query: 524 PLSQFIEDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 LS I++ ++ F RLK L +R +RHD+ EA+L + D + Sbjct: 501 LLSDLIDEACDLYDLDDAARSKMQGDVAEFIRLRLKNVLTERGVRHDVQEAVL-SDVDAV 559 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + ++ + + S R+ I + +L + + L A Sbjct: 560 ADVPGRAAYVERLLEESDAAALVQSFVRVGNIARSAPTGAVDPALFAADEERALLAAYEA 619 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 A + G E++ +R + I+ FFD V+V D V+ NRLSLL+ Sbjct: 620 AAELRAAGGDTAETIAAERRLAVA---------IDAFFDAVMVMDKDARVKTNRLSLLKS 670 Query: 688 IKNIILIVINVQKIV 702 I N +L + + KIV Sbjct: 671 IDNDLLEIADFSKIV 685 >gi|254225550|ref|ZP_04919159.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V51] gi|125621870|gb|EAZ50195.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V51] Length = 688 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 205/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANLADS 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAIALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|209519016|ref|ZP_03267824.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. H160] gi|209500528|gb|EEA00576.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. H160] Length = 699 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 211/686 (30%), Positives = 332/686 (48%), Gaps = 61/686 (8%) Query: 42 NMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ-- 92 + +Y TP RL + + + +PEK + E++ P + G + L + G Sbjct: 49 SFERYATPRRLAVTIHNVRAVAPEKHVREKVLPVSVALDKDGQPTAPLAKKLAALGFPDF 108 Query: 93 TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 T++D + +D K + + P + D L+ + + K+P P M + S+ Sbjct: 109 TVNDLERAQD-GKAEAFFLRYAAPGATLADGLQAALDETLPKLPIPTPMTYQRPDG--SS 165 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 ++RP + + E+II + + I + T GHRF + +++Q Y L Sbjct: 166 VQFVRPAHRLTAL-----HGEEIIPVSVLGIDADDTTLGHRFLSEGFVQIQHAQSYAETL 220 Query: 213 EE-AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKY 271 E V+ R+ AI + LA A ++V + LLEE+ LVEW V+ F+ ++ Sbjct: 221 EHRGRVIASFAKRKEAI--RSQLLAHAGEDKVVMPEALLEEVTSLVEWPVVYECRFEDEF 278 Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 L +P+E + LT++TNQK F G L + F++VSNI+ + IV+GN RVV RL Sbjct: 279 LQVPQECLILTMQTNQKYFALTDANGKLRSRFLIVSNIETATP-VEIVEGNERVVRPRLA 337 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F F D+ KPL +R+ L +VV+H K+G+ +RV Sbjct: 338 DAKFF--------------------FTQDMKKPLAERVPLL--ANVVYHNKLGSALQRVE 375 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R+ L IA L DVAL RA L+KADL T++V EFPELQG +G YA E Sbjct: 376 RLEGLAGAIAALTGGDVALATRAARLAKADLITDMVGEFPELQGTMGTYYARHDGEQEEV 435 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A EH +PR + +PT V+LADKL+TL+ W I +P+G KDP+ALRR LG Sbjct: 436 ALACSEHYQPRFSGDALPTTATGTIVALADKLETLVGIWGIGLQPTGEKDPFALRRHALG 495 Query: 512 IIRIILENKIDIPL--------SQFIEDQN-------LILFFHDRLKLYLHDRDIRHDLI 556 ++RI++E ++++ +QF N + F DRL+ L +R I Sbjct: 496 VLRILVEKQLNVDFVELLRVAYAQFAGVPNVADSTDAIYEFSMDRLRGLLRERGYAAGEI 555 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L L IV + + EF S A+ E + KRI IL +K + + P Sbjct: 556 DAVLALNPTRLDDIVARLDAVREFASLAEAESLAAANKRISNIL---KKSEGVTNGGVQP 612 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 AEK L A + +Q + + Y L ++ EP++ FF+ V+VN +D Sbjct: 613 ALFTEAAEKALNAQLEQVTPRVQSQLAVRDYTGALTALAALREPVDTFFNDVMVNAEDPA 672 Query: 677 VRDNRLSLLQYIKNIILIVINVQKIV 702 +R NRL+LL + + V ++ ++ Sbjct: 673 LRANRLALLGALHQQMNCVADISRLA 698 >gi|238793179|ref|ZP_04636807.1| Glycyl-tRNA synthetase beta subunit [Yersinia intermedia ATCC 29909] gi|238727552|gb|EEQ19078.1| Glycyl-tRNA synthetase beta subunit [Yersinia intermedia ATCC 29909] Length = 689 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 202/718 (28%), Positives = 329/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVVWYAAPRRLAVKVTDLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTDKGEWLLYRAHVKGQ 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E ++ Sbjct: 126 SAQL--LLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSELIPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D + GHRF + S D Y + L E V+ D E R++ I DA Sbjct: 179 GID-----SDRVIRGHRFMGEAEFTIDSADQYPQILLERGKVIADYELRKSIIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQKIGGIADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 294 AGSLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 -------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + D D I+A+L +K + F Sbjct: 511 YGSKLTNGNVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 571 RTLDAAATLAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 VFAAGNYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADI 685 >gi|15901324|ref|NP_345928.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae TIGR4] gi|111658115|ref|ZP_01408814.1| hypothetical protein SpneT_02000723 [Streptococcus pneumoniae TIGR4] gi|221232199|ref|YP_002511352.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae ATCC 700669] gi|225854916|ref|YP_002736428.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae JJA] gi|25009336|sp|Q97PW6|SYGB_STRPN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781864|sp|B8ZL20|SYGB_STRPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781866|sp|C1CF57|SYGB_STRZJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|14972964|gb|AAK75568.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae TIGR4] gi|220674660|emb|CAR69229.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae ATCC 700669] gi|225723313|gb|ACO19166.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae JJA] Length = 678 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 209/696 (30%), Positives = 348/696 (50%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLG-QETKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQL-IDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL + A L +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKASLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + T I ++ Q Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVE---TLILSGPASQQLKQ 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|256112922|ref|ZP_05453835.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|265994362|ref|ZP_06106919.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|262765475|gb|EEZ11264.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 269 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 133/266 (50%), Positives = 169/266 (63%), Gaps = 1/266 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 4 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 63 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 64 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 123 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 124 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 183 Query: 181 KEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 184 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 243 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMG 265 GLELVED LLEE+ GLVEW V MG Sbjct: 244 GLELVEDDGLLEEVSGLVEWPVVLMG 269 >gi|268319375|ref|YP_003293031.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii FI9785] gi|262397750|emb|CAX66764.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii FI9785] Length = 690 Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 211/734 (28%), Positives = 355/734 (48%), Gaps = 83/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF+R G+ T I + KG Y V ++ Sbjct: 64 QEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 121 KEGKKASDILMGMSDI-VKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLGDSVV-LANADDYEEALKSQYVIANADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFISVRN-GNSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + D ++ Sbjct: 335 -------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDIEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P +P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGEDENVSVAIKESYMPTSAEGELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ + Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLPE 505 Query: 530 -----------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E +N I F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSDKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N +I +E+ LYA + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRNAN---DIDENLFQDVSEEELYAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++E+ D I DL E I +F+ ++ D +V++NRL+ L + Sbjct: 623 N----ALEENTD----LSIADLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKV 674 Query: 689 KNIILIVINVQKIV 702 N+ + ++ K+V Sbjct: 675 NNLADRMGDLSKLV 688 >gi|289523166|ref|ZP_06440020.1| glycyl-tRNA synthetase, beta subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503709|gb|EFD24873.1| glycyl-tRNA synthetase, beta subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 691 Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 206/710 (29%), Positives = 351/710 (49%), Gaps = 68/710 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI +EEIPAR A E++ I ++E + Y M + TP R+ L L+GL+ Sbjct: 5 NLLFEIGTEEIPARFMPWALEEIKKIADDEFQKERLSYDVMESFGTPRRIALLLRGLAEK 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-LAVLR 114 + IEE GP +A GF +S G+ S +K+ G Y AV+R Sbjct: 65 QEDLIEEIKGPLWSQAFDDYSNPTRAAIGFAKSRGVPVES---LKRQEINGQFYAFAVIR 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R +L +++ ++++ +PK+M W F ++RP++ +LC+ ++ Sbjct: 122 QEGRETLSILPSLLERLVRRLVFPKNMYWMD-----PGFKFVRPIRWLLCLY-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L + NI+ GHRF +++ S D Y+ L + V++D R+ IL+ Sbjct: 172 VVPVKLGNLVGKNISRGHRFLGSSNVEINSADEYLEKLYDNYVIVDHAKRKEKILSGIRA 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++ + DL++E + LVE+ FMG+F++++L LPEE++ + +QK F + Sbjct: 232 IERENHVKAMLPPDLVDENVFLVEYPFPFMGTFEERFLSLPEEVLITVMIHHQKYFPLKD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI VSN A+D + +GN RV+ ARL DA+ F Sbjct: 292 DSGKLQPAFIGVSNNMATDMDV-VKEGNERVLRARLSDAVFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVA-LV 411 +N DL KPL R+ L ++V+ +GT ++V R++ + + + + +VA LV Sbjct: 333 --YNEDLKKPLAARVNELQ--NIVYQESLGTLLDKVVRVKDIALHLCKELGYGKEVADLV 388 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA LSKADL T +V EFPEL+G IG+EYA E+ A+ E P + +P + Sbjct: 389 ERAAFLSKADLVTNMVYEFPELRGVIGREYAKANGEHERVARALHEQYLPAFVGDVLPKD 448 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 I + +AD++D +++ ++ P+GS+DPYALRR + +I+ ++D+ L +E Sbjct: 449 VIGAIIGVADRIDNIVSCGKMDLLPTGSQDPYALRRTARCLNELIIGLEMDVDLGSLVEK 508 Query: 532 QNLIL------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +IL F RL + L ++ HD+ L L + L + L Sbjct: 509 AAVILKCEENIGQKVMDFLKQRLYVQLREKGFSHDVATLSLAVIGQRPLQALKLAEKLES 568 Query: 580 FFSSAKGEKFLLSAKRIFQIL----AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + ++ +A R+ IL A++ K + + Y E EK LY IS Sbjct: 569 VRNEEWFQRLATAAVRVRNILAKASALDTGKGK-----VDESYFQSEVEKELYHKISVIA 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +++++ + +I + L + I FF++VLV DD +R NRL+LL Sbjct: 624 PVLRDALKSFDWDRIINSLLELEPIISRFFEEVLVMADDPLLRMNRLALL 673 >gi|157163964|ref|YP_001467077.1| glycyl-tRNA synthetase subunit beta [Campylobacter concisus 13826] gi|112800407|gb|EAT97751.1| glycyl-tRNA synthetase, beta subunit [Campylobacter concisus 13826] Length = 672 Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 204/726 (28%), Positives = 369/726 (50%), Gaps = 81/726 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLEI EE+PA + +++ +L E+ I + Y+TP RL + + Sbjct: 1 MKELLLEIGVEELPAIPFLRELPNINAKWQAVL-EKYNIKSEFKFYYTPRRLVFFHEKFP 59 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ + +G + GA KA F G IS+ ++K G L + Sbjct: 60 LAQPDSVASFVGAPKQVALKDGAFTKAALSFANKCG---ISESELKFKEIDGKEVLYYEK 116 Query: 115 KPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + K + ++ +V ++ + + KSMRW F +IRP++S LC+L E Sbjct: 117 EVKGEPVAKIMGDMVEEFLKSLSFGKSMRWGNGE-----FEFIRPIRSFLCLLGDE---- 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I + + N TY HR + IK+ ++ Y + ++L+ + R IL++ Sbjct: 168 -VIKFNKFGVESSNSTYPHRSISYDMIKISNIKEYFEGSKSRGIVLEADEREKIILDEFE 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +++ GL++ DKDLL E++ + E+ +GSF++++L +P E+I ++K NQ+ F Sbjct: 227 KISQKSGLKIEIDKDLLAEVVAITEYPTALLGSFEEEFLEVPSEVIITSMKENQRYFPV- 285 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G LAN F++VSN D + I++GN +V+ ARL DA+ FW+ D Sbjct: 286 FKDGKLANGFVVVSNAITKDY-SLIIKGNEKVLRARLSDAMFFWQSD------------- 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA----QLIDADV- 408 L + ++ + ++G+ E+ R + KK+A +L+ + Sbjct: 332 -----------LAHEFGPEKLKNITYLKELGSIYEKELRELKVAKKLASNYGELLKKEAG 380 Query: 409 ---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 A ++RA++LSKADL T++V EF ELQG +G YA +NE+ + AI+E P G Sbjct: 381 EYEAKLERAVMLSKADLTTQMVYEFTELQGVMGAYYAKAKNEDENVVLAIKEQYLPDGEE 440 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 P+ S V+L++KLDTL+ ++I + PSG+KDPYALRRA G+I+I+L + + + Sbjct: 441 AQCPSKVFSSVVALSNKLDTLMGLFSIGKIPSGTKDPYALRRAANGVIKIVLAHSLKFDV 500 Query: 526 SQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +ED + LI F DRL + D +++A ++ ++L + +I+ Sbjct: 501 KEILEDIAKEYKKFDVEVLINFILDRLYTFF---DANASIVKACIKSGEKDILELTKMIE 557 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + S + + KR+ I+ K+ + S+ ++ ++AEK L +D Sbjct: 558 ALAKISSEPNFRENFSTFKRLANII-----KDDKFSM-VNESLFEIDAEKAL----NDAF 607 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +S+ Y L ++ I+ FFD+V++NV++ +VR+NR++++ I + IL V Sbjct: 608 KAVDKSL---AYEPRLKALFALKPQIDEFFDKVMINVENEKVRNNRVAIIGQIYSEILKV 664 Query: 696 INVQKI 701 ++++I Sbjct: 665 ADIKEI 670 >gi|113968354|ref|YP_732147.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. MR-4] gi|122944262|sp|Q0HPC7|SYGB_SHESM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|113883038|gb|ABI37090.1| glycyl-tRNA synthetase, beta subunit [Shewanella sp. MR-4] Length = 688 Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 213/699 (30%), Positives = 337/699 (48%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLAINVTELAIA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D + VY A + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVDQAERLVTDKGEWLVYNAKVEG 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 125 VE--TKSLIAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L+E V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNVRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDDLLEEVTSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F Sbjct: 292 EAGKLLPNFIFVANIESKDP-AQIIAGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 333 --FNTDKKHTLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------SQF 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L +Q Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 529 IEDQNL---------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + NL + F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIDVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K E+ I+ L AE+ L A +++ + Sbjct: 569 FRSLEASSALAAANKRVSNILA---KVEGELPTAINSALLAEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y Q LL S+ E ++ FF+ V+V DD ++ Sbjct: 626 PLFANADYQQALTLLSSLRESVDQFFEDVMVMADDEALK 664 >gi|227513298|ref|ZP_03943347.1| glycine--tRNA ligase [Lactobacillus buchneri ATCC 11577] gi|227083499|gb|EEI18811.1| glycine--tRNA ligase [Lactobacillus buchneri ATCC 11577] Length = 693 Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 209/732 (28%), Positives = 351/732 (47%), Gaps = 77/732 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI EEIPA + + L LK++ + + ++ + TP RL LY+ GL+ Sbjct: 4 NFLLEIGLEEIPAHVVTPSINQLKKRASDYLKDQRITFDQIKTFSTPRRLTLYITGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ + GP G KA GF R G T D K+ KG Y+ V + Sbjct: 64 QPDIDKSVKGPAKKIAQDTDGNWTKAAIGFSRGQG-ATTDDITFKE--VKGTDYVFVEKH 120 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +++VL + V I + +P M+W+ +F ++RP+K ++ +L +K Sbjct: 121 IAGKSVDEVLTGMKDV-ITAMTFPTMMKWANY-----SFEYVRPIKWLVALL-----NDK 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + ++ + GHRF +++ + D Y L + V+ D + R+ I+ H+ Sbjct: 170 VIPFTILDVSTDRVISGHRFLGKD-VELANADEYEEKLTQQFVIADAKKRKELIVKQIHK 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ D DLLEE+ LVEW F G F++KYL +P+E++ ++K +Q+ F Sbjct: 229 IAEDNDWQINLDPDLLEEVNNLVEWPTAFAGKFNEKYLKIPDEVLVTSMKDHQRFFYVTD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V N D ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 289 GNGTLLPHFISVRNGNDYDI-QNVIAGNEKVLTARLEDAMFFYEEDQ------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV----LGKKIAQLIDADVAL 410 K + + + RL V FH KI T E++ R++V LGK+ D ++ Sbjct: 335 -------KKTIAEDVERLKK--VSFHDKISTMFEKMQRVQVISNYLGKQFG-FSDKELED 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 385 EQRAAEIYKFDLVTGMVGEFAELQGVMGEKYALLNGEAPAVAKAISEHYMPISANGALPA 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + + ++++DKLD+++ F+A PSGS DPYALRR GI+RI+ + K + L Sbjct: 445 SNVGALLAVSDKLDSILTFFAAGMIPSGSNDPYALRRQATGIVRIVADKKWNFDLIDTLK 504 Query: 529 ----IEDQNLIL--------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ++D+ + F DR+K YL D IR+D+ +A+ ++L Sbjct: 505 AIINLQDEKQVAPKLDQAGQITAVSDFIKDRIKQYLDDLGIRYDISDAVTSGSQTDILFN 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + + L E + + S R+ +I K+ ++ ++ S E+EK L Sbjct: 565 ISSGQVLQEQKDDDAFKSIIESLTRVLRISKKGHFKDNDLVVDGS--LFENESEKVLNQE 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ E + + D L + + I +FD +V D ++RDN L L + + Sbjct: 623 VASAAEGYYEISAKEDF----DRLSGLKDAINAYFDATMVMDKDEKLRDNHLRQLTLLSH 678 Query: 691 IILIVINVQKIV 702 +IL + ++ K+V Sbjct: 679 LILHLGDLDKLV 690 >gi|121603358|ref|YP_980687.1| glycine--tRNA ligase [Polaromonas naphthalenivorans CJ2] gi|229558568|sp|A1VJD8|SYGB_POLNA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120592327|gb|ABM35766.1| glycyl-tRNA synthetase beta chain [Polaromonas naphthalenivorans CJ2] Length = 711 Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 211/740 (28%), Positives = 353/740 (47%), Gaps = 74/740 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L LK G+ + Y +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALKKLGDAFAGVLAEQLKALGLATAESVVTAYASPRRLAAHISHVW 64 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTG------LQTISDCQIKKDPKKGD 107 + +K ++++L P G A+ L++ G + ++ + D K Sbjct: 65 LKADDKAVQQKLMPVSVGLDSAGHATPALLKRLQALGADLSDPVAAVAALKRAPDGKAEA 124 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSIL 163 ++ L L + L+ + AI K+P PK M + ++ +++RP ++ Sbjct: 125 LFYNSLVTGATL-DTGLQKALEEAIAKLPIPKVMSYQLETDCELPGWTSVNFVRPAHGLV 183 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPE 222 + + K++ L GN T GHRF A P+ + D Y LE ++ Sbjct: 184 ALHGSTVVPVKVLGLK-----AGNSTRGHRFEAAVDPVVLADADSYAVTLEIDGAVIASF 238 Query: 223 CRRNAILNDAHRLASAV-----GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEE 277 +R A + A +LA A G++ +ED LL+E+ LVE V + F+K++L +P+E Sbjct: 239 AQRKAEI--ARQLAEAAAELGGGVQPIEDDALLDEVTALVERPNVLVCEFEKEFLDVPQE 296 Query: 278 LIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFW 337 + LT+K NQK F G L N F++VSNI D + ++ GN RVV RL DA F+ Sbjct: 297 CLILTMKANQKYFPLLDAAGKLTNKFLVVSNISPEDA-SFVIGGNERVVRPRLADAKFFF 355 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 DQ+ L+S E K VV+H K+GTQGER R+ + Sbjct: 356 --DQDRKRTLASRVEGLGK--------------------VVYHNKLGTQGERTERVAEIA 393 Query: 398 KKIAQLIDADVALVDRAIV--LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 KIAQL++ D L+KADL T++V EFPELQG +G+ YA+ + AI Sbjct: 394 VKIAQLLEGDALAGKAGKAAWLAKADLLTDMVGEFPELQGTMGRYYALHDGHSAEIAAAI 453 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 E+H KPR + +P N + + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR+ Sbjct: 454 EDHYKPRFAGDELPRNPVGVVVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRM 513 Query: 516 ILENKIDIPLSQFIEDQ-------------NLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 ++E + + L + L+ F +DRL L ++ +++++ Sbjct: 514 LVEKDLPLDLGALVGGAAPVFGDKITDATPALLDFIYDRLSGSLREQGYSAQEVDSVVSQ 573 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 + L + + + F + + + KRI IL +K+ E+ +S L Sbjct: 574 KPQRLGDVPKRLAAVRAFAALPEAPALAAANKRIGNIL---KKEALEVDPHVSELLLREA 630 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AE LYA + D D Y L ++ P++ FFD V+VN ++ ++R NR Sbjct: 631 AEIALYAAMRDVVPTANAQFDTGDYTASLQTLAALRAPVDAFFDGVMVNAEELDLRLNRQ 690 Query: 683 SLLQYIKNIILIVINVQKIV 702 LL+ + N + V ++ ++V Sbjct: 691 GLLKSLHNAMNRVADLSRLV 710 >gi|229515941|ref|ZP_04405398.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TMA 21] gi|229347041|gb|EEO12003.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TMA 21] Length = 693 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 206/725 (28%), Positives = 341/725 (47%), Gaps = 69/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLAN-----CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 + + AN FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 SHKMGDANKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF------------ 337 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 --------FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADV 387 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +L+K DL T +V EF + QG +G YA E A+ E PR + + Sbjct: 388 EKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDEL 447 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L Sbjct: 448 PSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDL 506 Query: 529 IE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 I +Q +I F R + D D+I+A+L Sbjct: 507 IAKAKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 567 VKAVSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEI 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L Sbjct: 624 MAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFL 683 Query: 694 IVINV 698 + ++ Sbjct: 684 QIADI 688 >gi|229524922|ref|ZP_04414327.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae bv. albensis VL426] gi|229338503|gb|EEO03520.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae bv. albensis VL426] Length = 688 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 204/720 (28%), Positives = 339/720 (47%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVASLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTLRGHRFMGEAEFTLESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+++L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQSVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + E+ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|229520192|ref|ZP_04409619.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TM 11079-80] gi|229342786|gb|EEO07777.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TM 11079-80] Length = 693 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 206/725 (28%), Positives = 341/725 (47%), Gaps = 69/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANLTES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLAN-----CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 + + AN FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 SHKMGDANKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF------------ 337 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 338 --------FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADV 387 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +L+K DL T +V EF + QG +G YA E A+ E PR + + Sbjct: 388 EKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDEL 447 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L Sbjct: 448 PSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDL 506 Query: 529 IE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 I +Q +I F R + D D+I+A+L Sbjct: 507 IAKAKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K ++ F + + E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 567 VKAVSHFRALEEAEALAAANKRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEI 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L Sbjct: 624 MAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFL 683 Query: 694 IVINV 698 + ++ Sbjct: 684 QIADI 688 >gi|227890106|ref|ZP_04007911.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii ATCC 33200] gi|227849550|gb|EEJ59636.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii ATCC 33200] Length = 690 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 211/734 (28%), Positives = 355/734 (48%), Gaps = 83/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF+R G+ T I + KG Y V ++ Sbjct: 64 QEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 121 KEGKKASDILMGMSDI-VKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLDSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLGDSVV-LANADDYEEALKSQYVIANADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFISVRN-GNSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + D ++ Sbjct: 335 -------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDIEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P +P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGEDENVSVAIKESYMPTSAEGELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ + Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLPE 505 Query: 530 -----------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E +N I F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSDKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N +I +E+ LYA + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRNAN---DIDENLFQDVSEEELYAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++E+ D I DL E I +F+ ++ D +V++NRL+ L + Sbjct: 623 N----ALEENTD----LSIADLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKV 674 Query: 689 KNIILIVINVQKIV 702 N+ + ++ K+V Sbjct: 675 NNLADRMGDLSKLV 688 >gi|298230969|ref|ZP_06964650.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae str. Canada MDR_19F] Length = 646 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 205/678 (30%), Positives = 338/678 (49%), Gaps = 75/678 (11%) Query: 32 LLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKAIDG 84 LKE + ++ ++ + TP RL + + GLS + E+ GP G KA G Sbjct: 1 FLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGPAKKIALDSDGNFTKAAQG 60 Query: 85 FLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRW 143 F+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ +V V ++ + +P SM W Sbjct: 61 FVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQSVEAIVPGVVDV-LKSLTFPVSMHW 116 Query: 144 STTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQ 203 + ++F +IRP+ ++ +L E+ DLD +I ++ GHRF K+Q Sbjct: 117 AG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGSRVSRGHRFLGKE-TKIQ 165 Query: 204 SLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVF 263 S Y DL + V+ DP R I++ + + G+ + D DLL E++ LVE+ F Sbjct: 166 SALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVHIEIDADLLNEVLNLVEYPTAF 225 Query: 264 MGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNS 323 MGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V N A + +++GN Sbjct: 226 MGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISVRNGNA-ERLKNVIKGNE 284 Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 +V+ ARLED FW+ DQ + +S L E K N +V FH KI Sbjct: 285 KVLVARLEDGEFFWREDQKLV--ISDLVE---KLN-----------------NVTFHEKI 322 Query: 384 GTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGK 439 G+ E R +I VL +K +D V L RA + K DL T +V EF ELQG +G+ Sbjct: 323 GSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFDLLTGMVGEFDELQGIMGE 381 Query: 440 EYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGS 499 +Y +L E + AI EH P +P +K+ +++ADKLDT+++F+++ PSGS Sbjct: 382 KYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKLDTILSFFSVGLIPSGS 441 Query: 500 KDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF----FHDRLKL--YLHDR---- 549 DPYALRRAT G++RI+ I + + I+ + F + ++ ++ ++ R Sbjct: 442 NDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYENKAEVMDFIKARVDKM 501 Query: 550 --DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN 607 D+ EA+L N + D+++ + +K E F S + + + + EK Sbjct: 502 MGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDFKPSVESLSRAFNLAEKA- 557 Query: 608 REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 E + + EK L + S K+ L ++ I+ FF+ Sbjct: 558 -EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ-------LFALSPVIDAFFEN 609 Query: 668 VLVNVDDREVRDNRLSLL 685 +V +D+ VR NRL++L Sbjct: 610 TMVMAEDQAVRQNRLAIL 627 >gi|114331843|ref|YP_748065.1| glycine--tRNA ligase [Nitrosomonas eutropha C91] gi|122313421|sp|Q0AEY2|SYGB_NITEC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114308857|gb|ABI60100.1| glycyl-tRNA synthetase beta chain [Nitrosomonas eutropha C91] Length = 715 Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 207/679 (30%), Positives = 328/679 (48%), Gaps = 87/679 (12%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEE-RLGPRV------GAGKKAIDGFLRSTGLQTISDCQ 98 + +P RL ++L +S +P++I +L P G A+ L + G++ ++ Sbjct: 50 FASPRRLAVHLTAISVQAPDQIVTLKLMPVAVGLDAQGQPTPALHKKLAALGVENVAVSA 109 Query: 99 IKKDPKKGDVYLAVLRKPKR--LIEDVLKTIVPVAIQKVPWPKSMR------WSTTHSPI 150 +K+ ++G + L + L+ L+ V AI+++P K M W H Sbjct: 110 LKR-VQEGKAEMLFLEQSVTGILLAAGLQKAVDEAIRQLPVAKMMTYQLDDGWENVH--- 165 Query: 151 SAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYI 209 +IRP ++ + ++I+ + GN T GHRF A + + DHY Sbjct: 166 ----FIRPAHGLIAL-----HGQQIVPISALGFAAGNTTRGHRFEAKQAELVIDHADHYE 216 Query: 210 RDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFD 268 LE E V+ + RR+ I A L+ +ED LL+E+ LVE V MG+F Sbjct: 217 YILETEGTVIPGFDRRRSRIREGLETATRAAQLQCIEDAALLDEVTALVERPNVLMGTFS 276 Query: 269 KKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAA 328 +L +P+E + T+K NQK F +G L N F++VSNI +D G I+ GN RV+ + Sbjct: 277 ADFLEVPQECLISTMKINQKYFPLLDADGKLTNRFLIVSNITPADPGQ-IIAGNERVIRS 335 Query: 329 RLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGE 388 RL DA F F+ D + L R+ LD V++H ++G+QGE Sbjct: 336 RLADAKFF--------------------FDHDRKRTLASRLPDLD--KVIYHHQLGSQGE 373 Query: 389 RVSRIRVLGKKIAQLID-ADV-ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQN 446 R +R L + I QL+D D+ A ++A +L+KADL T++V EFPELQG +G+ YA + Sbjct: 374 RTRYVRALAQIIGQLLDNGDLPAQANQAAMLAKADLLTDMVGEFPELQGIMGRYYAQREG 433 Query: 447 ENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALR 506 + + AIE+H KPR + +P + I V+LADKL+TLI+ ++I + P+G KDPYALR Sbjct: 434 VDETIAFAIEDHYKPRFAGDALPRSMTGICVALADKLETLISLFSIGQFPTGDKDPYALR 493 Query: 507 RATLGIIRIILENKIDIPLSQFIEDQNLIL----------------------------FF 538 R LG+IRI++E + I L I +L FF Sbjct: 494 RHALGVIRILIEKDLPIGLDVLISRAAGVLRDEISGEQGPESSHARPVTPQLTEQLQDFF 553 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 +DRL L D+ +E++L L I + + F + + + KR+ Sbjct: 554 YDRLASSLRDQGYTVQEVESVLNLRPSLLCEIPRRLAAVRAFTALPEAASLAAANKRVSN 613 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 IL +K + ++ I L AE LY +S+ + + + Y +L ++ Sbjct: 614 IL---KKSEFDATVSIDKACLQAPAEIALYRALSEIESDARHAFQKGDYVTALQMLAALK 670 Query: 659 EPIEIFFDQVLVNVDDREV 677 PI+ FFDQV+VN D+ EV Sbjct: 671 APIDAFFDQVMVN-DENEV 688 >gi|323496933|ref|ZP_08101961.1| glycyl-tRNA synthetase subunit beta [Vibrio sinaloensis DSM 21326] gi|323318007|gb|EGA70990.1| glycyl-tRNA synthetase subunit beta [Vibrio sinaloensis DSM 21326] Length = 688 Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 203/699 (29%), Positives = 328/699 (46%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGASLAHEGVKWYAAPRRLALKVAALAEG 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 64 QEDKVVEKRGPAVSVAFDADGNATKAAQGWARSNGITVEQADRLVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K++ ++ A+ + Sbjct: 122 KGQATSEIVVDLAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGAD-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D+ + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILADSQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ IDADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIDADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ IS Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDELPSTGIS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN + L+ I Sbjct: 449 SAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYSLDLTDLIAKAQS 507 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + D D+I+A+L +K ++ Sbjct: 508 LFGDKLTNANVANDVIDFMLGRFNAWYKDEGYSVDIIQAVLANRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ +I L +AEK L + ++ Sbjct: 568 FRELEAAEALAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|37524312|ref|NP_927656.1| glycyl-tRNA synthetase subunit beta [Photorhabdus luminescens subsp. laumondii TTO1] gi|81833305|sp|Q7MB99|SYGB_PHOLL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|36783735|emb|CAE12589.1| glycyl-tRNA synthetase beta chain (glycine--TRNA ligase beta chain) (GlyRS) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 689 Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 206/731 (28%), Positives = 342/731 (46%), Gaps = 87/731 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + Y + + TP RL L + L Sbjct: 6 FLVEIGTEELPPKALRSLAEAFAANFAAELDNANLAYGEISWFATPRRLALKVANLDEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A+++ Sbjct: 66 ADREVEKRGPAIAQAFDTEGKPTKAAEGWARGCGITAAQAERLVTDKGEWLLYRALVKG- 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++++L +V A+ K+P PK MRWS + + RP+ ++ + +++I Sbjct: 125 -RSVKELLAAMVNSALNKLPIPKLMRWSDKETQFA-----RPVHTVTMLF-----GDELI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + ++ I + GHRF + + + Y L++ VL D R+ I D + Sbjct: 174 EGEILGIKSARVIRGHRFMGESEFAIDNAEQYPEILQQRGRVLADYTTRKVLIKQDVEQA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AIKLGGVADISDSLLEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 G L FI V+NI +SD I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 AGKLMANFIFVANIDSSDP-QQIIDGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 352 --------------------------VLFQKQLGTLRDKTDRIQALAGWIAEKIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E K+ + L E Sbjct: 446 TGVSCALAIADKMDTLAGIFGIGQHPRGDKDPFALRRAALGALRIIVEKKLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + ++ R D I+A+L +K Sbjct: 506 EAVRLYGDKLTNAKVTDDVVEFMLGRFRAWYQEQGYRVDTIQAVLARRPTQPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISL-------EISPQYLLLEAEKRL 627 + F + + + KR+ ILA EE N ++ + E+ L+ + +L Sbjct: 566 AVTHFRTLDEAAALAAANKRVSNILAKSEETLNEKVDVSTLKAPEEVKLATHLIVLQDKL 625 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + ++ H QE++ L S+ E ++ FFD V+V +D +VR NRL+LL Sbjct: 626 APLFAE--GHYQEALVE---------LASLREVVDAFFDNVMVMDEDLQVRVNRLTLLSE 674 Query: 688 IKNIILIVINV 698 ++++ L V ++ Sbjct: 675 LRDLFLRVADI 685 >gi|148990283|ref|ZP_01821494.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP6-BS73] gi|147924422|gb|EDK75512.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP6-BS73] Length = 678 Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 206/696 (29%), Positives = 345/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFRGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEVGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL +K +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|225620191|ref|YP_002721448.1| glycyl-tRNA synthetase subunit beta [Brachyspira hyodysenteriae WA1] gi|225215010|gb|ACN83744.1| glycyl-tRNA synthetase, beta subunit [Brachyspira hyodysenteriae WA1] Length = 697 Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 205/749 (27%), Positives = 356/749 (47%), Gaps = 100/749 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI EEIPA + A+ I+ LK G+ + + Y TP RL + + + Sbjct: 1 MKDLLIEILVEEIPADFAYPASVSFKKIIENTLKNNGINFSTVNSYTTPRRLAVLAENIE 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPK---------K 105 S +++ E GP + GA KA +GFL+S + S I ++ Sbjct: 61 EKSKDEVIEFRGPLFESAFKDGAPTKAGEGFLKSHNIDANSIKNIDENESFDKPYIKEVN 120 Query: 106 GDVYLAVLRK-----PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLK 160 G Y+ V ++ K+L E+ L++IV + + K MRW F+++RP++ Sbjct: 121 GKKYIFVKKEKKGIETKKLFEEKLESIV----SSIDFKKKMRWGNKD-----FAFVRPIR 171 Query: 161 SILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLD 220 ++L + E II + I N GHR +P ++ + Y + L E V++ Sbjct: 172 NVLALFGNE-----IIKTSVAGIETNNKVTGHRLLSPEFKEINNPKDYEKTLAEKHVVVS 226 Query: 221 PECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 E R I+N + G E V K + E ++ LVE + FD K+L +P+E++ Sbjct: 227 REKRLENIINQLENIEKEHGYEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLT 286 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 + +QK F ++G L N F++ +N + I+ GN RV+ ARL D ++ D Sbjct: 287 SEMIEHQKYFPLCKKDGTLTNLFVITANQPKT---PQIIAGNIRVLTARLSDGRFLYQED 343 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + K +D+ RL+ML +F ++G+ ++V R+ + + Sbjct: 344 --------------------IRKGMDEMNERLEML--MFRKELGSVADKVKRLEKNSELL 381 Query: 401 AQLI--DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 +L+ + D + +AI K+DL + +V FPELQG +G +A N N AI E Sbjct: 382 IKLLGYEKDKENILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKSMNLNDDVALAINEQ 441 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +P + +P+N +++ DK+D + + + + P+GS+DP ALRR LGII I+ + Sbjct: 442 YRPLFAADEIPSNDTGKAIAILDKMDNIAAGFYVGDIPTGSQDPNALRRQALGIINILTK 501 Query: 519 NKIDIPLSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL 560 +K I L + IED +++ FF R + +D D D + +L Sbjct: 502 SKKHINLKKLIEDAINSMPKDARNNKSEDLVKDIFEFFKSRFE---NDIDFAKDSVAGVL 558 Query: 561 RPENDNL------LTIVDLIKHLN-EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 D++ + +D + N E FS+ LL KRI ++ K ++++L+ Sbjct: 559 STGIDDMYDAYLKIEAIDAFRKKNEELFSN-----LLLVFKRIKNMI----KSAKDVNLD 609 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 S L EAEK LY + + + M+++ Y + LL S+ EP++ FF ++VNVD Sbjct: 610 ES--LLKEEAEKSLYNTYKEKLNEVNKLMENREYEKTFALLASLYEPLDKFFKDIMVNVD 667 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKIV 702 D ++++NR++LL + I +++ +V Sbjct: 668 DEKIKNNRIALLSSVDKIFKNMLDFSSLV 696 >gi|303327126|ref|ZP_07357568.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. 3_1_syn3] gi|302863114|gb|EFL86046.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. 3_1_syn3] Length = 698 Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 216/727 (29%), Positives = 335/727 (46%), Gaps = 79/727 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI SEE+P+R +L L E G+ Y +R TP R + ++ L+ Sbjct: 1 MATFVLEIGSEELPSRFLAPEEAELRARFSTALDEAGLEYGAVRVMSTPRRAVVLVEDLN 60 Query: 61 PHSPEKIEERLGP--RV-----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P EK E GP RV GA KA++GF R+ GL +++D + + +KG+ Sbjct: 61 PVQREKEEVIPGPPARVAYGPDGAPTKALEGFARTHGL-SVADV-FRLETEKGEYVAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R + +L I P I +P+ K MRW A ++ RP+ IL +L E Sbjct: 119 RTGGAAAKALLAGICPAVITSLPFAKRMRWGAY-----ALAYARPIHWILALL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDA 232 +++ DL + G T GHR H P V D Y+ + V LDP RR I+ Sbjct: 169 EVVPFDLGPVASGRETRGHRVHGSGPFSVAHADAYLEVAADSCAVTLDPARRRAVIVEGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+ G ++ + LL+E+ GL E + FD YL +P E++ +++++QK F Sbjct: 229 DAQAARAGGRVLWNDGLLDEVQGLAEHPVPLLADFDPAYLEVPREVLLTSMESHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ D + G RV+ ARL+DA FW+ D Sbjct: 289 EGPDGKLMPHFLTVLNLSPEDM-EVVKHGWERVLRARLDDARFFWRAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRI----RVLGKKIAQLIDAD 407 L+ N DL L+ LD V+F +G+ G++ R+ R L ++ A + AD Sbjct: 336 --LRENFDLW---------LEKLDHVIFIGALGSMGDKTRRLEALCRWLAERCAPRLGAD 384 Query: 408 V-ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + A RA LSKADL T +V EF LQG +G YAV + E + DA++E P GP Sbjct: 385 LTAEAARAGRLSKADLVTGLVGEFDTLQGIMGGIYAVQKGEAQAVADALKEQYLPAGPDS 444 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + + +S+ADK DTL+ + +N P+G+ DP LRR LGIIRI+L+ +D+ + Sbjct: 445 PLPQSPVGALLSMADKADTLVGCFGLNMIPTGAADPNGLRRCALGIIRILLDFGLDLDVR 504 Query: 527 QFIEDQ------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + L+ FF RL+ Y R L++A L + Sbjct: 505 ELFAKARELYGTRQWKLPPDEALDKLMEFFAARLRNYFLSRGQDTLLVDAALNAGAAQVP 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY----LLLEA- 623 + L F + + + KR+ I+ ++ + E P+Y LL EA Sbjct: 565 DSGARLAALAAFSREPGYAEAVQTFKRVANIV------RKQAAAETLPEYWDAALLREAP 618 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L + + + L + ++ FFD V+V +D +R NRL+ Sbjct: 619 EKDLAETLETLLPRLDAFRASGDHDAALATLREVRPAVDAFFDGVMVMCEDAALRRNRLA 678 Query: 684 LLQYIKN 690 +LQ + + Sbjct: 679 MLQALGS 685 >gi|123444319|ref|YP_001008285.1| glycyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166227932|sp|A1JT50|SYGB_YERE8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|122091280|emb|CAL14166.1| glycyl-tRNA synthetase beta subunit [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 689 Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 203/718 (28%), Positives = 331/718 (46%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + Y + Y P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELNNANLPYGEVIWYAAPRRLALKVTNLSATQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTDKGEWLLYRAHVKGQ 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E ++ Sbjct: 126 SAQL--LLAGMVNTALSKLPIPKLMRWGDKDT-----QFVRPVHTVTMLLGSEVIPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 +D I GHRF + + D Y + L+E V+ D E R+ I DA Sbjct: 179 GID-----SDRIIRGHRFMGEPEFTLDNADQYPQVLQERGKVIADYELRKAIIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDT 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 294 AGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 -------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + D D I+A+L +K + F Sbjct: 511 YGSKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K +++ + L AE +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSTDKLNDHVRASVLKEPAELKLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 VFAAGQYQEALVELAALRETVDEFFESVMVMDEDDAVRVNRLTLLSKLRELFLQVADI 685 >gi|139473280|ref|YP_001127995.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes str. Manfredo] gi|229558581|sp|A2RD24|SYGB_STRPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|134271526|emb|CAM29749.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes str. Manfredo] Length = 679 Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 206/704 (29%), Positives = 342/704 (48%), Gaps = 90/704 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + + +P SM W+ ++F +IRP+ ++ +L E +I Sbjct: 132 GVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGKE-TTITSADSYEDDLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFVS 299 Query: 306 V--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNLDLS 362 V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 300 VRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL--------------- 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 +A+L +V FH KIG+ E + R RV+ +A+ L + A VDRA + K Sbjct: 342 ------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++L Sbjct: 394 FDLLTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAGGALPETKVGAVLAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 454 ADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDS 513 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 N I D++ +DIR EAIL + + +++ Sbjct: 514 LTYTNKADVMNFIRARVDKMMGKAAPKDIR----EAILAS---STFVVPEMLAVAEALVK 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 ++ E + + + + + + EK + S+ + P E E L+A I ++ Sbjct: 567 ASHTENYKPAVESLSRAFNLAEKAD--ASVHVDPSLFENEQENTLFAAIQGL------TL 618 Query: 643 DHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLSLL 685 Q+ + + P I FFD +V +D+ +++NRL++L Sbjct: 619 AGSAAQQLEQVF--VLSPVINDFFDNTMVMAEDQALKNNRLAIL 660 >gi|94986743|ref|YP_594676.1| glycyl-tRNA synthetase, beta subunit [Lawsonia intracellularis PHE/MN1-00] gi|226737057|sp|Q1MRM1|SYGB_LAWIP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94730992|emb|CAJ54355.1| Glycyl-tRNA synthetase, beta subunit [Lawsonia intracellularis PHE/MN1-00] Length = 695 Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 222/716 (31%), Positives = 345/716 (48%), Gaps = 78/716 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+PAR + +L + + L+ G + Y TP RL + +KGL Sbjct: 1 MATFILEIGTEELPARFLLELQSELGVRFLDSLQSMGYRPTEVSDYSTPRRLVVCIKGLD 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E +GP + G KA +GF ++ G+ S QI D +G+ + Sbjct: 61 MIQPHCEEVVIGPPINIAFDKDGNPTKAAEGFAKNLGITIGSLSQISTD--RGEYISGLK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K ++VL + P I +P PK MRW + F++IRP++ I+ +L ++ Sbjct: 119 VKGGIPTKEVLARLCPEIITALPLPKRMRWGN-----NPFTFIRPIRWIMALLDSD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKV-QSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I+ +L I T G R + I+V S D+Y+ E V+LDP R+++IL Sbjct: 170 -IVPFELAGIHSNRNTVGLRNNNVPFIEVPSSTDYYMLLKEVGNVILDPNSRKDSILQLG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ A +G + ++ LL E+IGLVE +G+ + +L LP E++ +I+T+QK F Sbjct: 229 NKEAQLIGGVVNWNERLLNEVIGLVEHPYPLLGTINSVFLNLPREVLLTSIETHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ D A + QG RV+ ARLEDA FW Sbjct: 289 LDSQGNLLPYFLTVLNMTPPDL-ALVKQGWERVLQARLEDARFFW--------------- 332 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 N D++ D+ +L L +F +G+ ++ R+ +L + IA+ I A Sbjct: 333 -----NEDINSSFDEWQEKLTHL--IFLDPLGSIAQKEHRVSLLCEWIAKYIPTSNAEEA 385 Query: 413 R-AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 R A LSK DL +++V EFPELQG +G YA + E+ S AI E P GP +VP Sbjct: 386 RKAGSLSKVDLVSKMVEEFPELQGVMGGIYARHKGESESIATAIAEQYLPSGPDTDVPVT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +S+ADK+DTL+ + P+G+ DPY LRR LGIIRI++E + I L Q Sbjct: 446 DLGAILSIADKIDTLVGCFGCGIIPTGTADPYGLRRCALGIIRILIEKEYPINLHQLYTR 505 Query: 530 --------------ED--QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ED Q L F RLK Y ++EAI+ + L +I D Sbjct: 506 AQDNFVNVSWKLAPEDVLQKLHEFIIARLKNYFLALGYDTLVVEAIVSTQTSQLWSIKD- 564 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS----PQYLLLEAEK---- 625 L+ F ++ E F + I +++ I +K+++E + ++ P AEK Sbjct: 565 --RLDSFILLSQHEDFSQLVQTIKRVINIIKKQDKETEIVLTGHWNPSLFKDTAEKVLAE 622 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 +L ++ F QES + +L + I FFDQV++ +D EVR NR Sbjct: 623 KLMIAVNKFN---QESQTASL--PVFMMLLKLQPAINTFFDQVMIMSNDIEVRRNR 673 >gi|170691404|ref|ZP_02882569.1| glycyl-tRNA synthetase, beta subunit [Burkholderia graminis C4D1M] gi|170143609|gb|EDT11772.1| glycyl-tRNA synthetase, beta subunit [Burkholderia graminis C4D1M] Length = 700 Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 216/713 (30%), Positives = 351/713 (49%), Gaps = 62/713 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE ++ L G EG + + +Y TP RL + +K + +PEK + E++ P Sbjct: 24 ARLGDAFAEGIAERLAGRDLIEGQL--SFERYATPRRLAVTVKNVRTVAPEKHVREKVLP 81 Query: 74 ------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 + G + L + G +ISD + +D K + + P + + L+ Sbjct: 82 VSVALDKDGQPTAPLAKKLAALGFPDFSISDLERAQD-GKAEAFFLRYAAPGATLAEGLQ 140 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + + K+P PK M + S ++RP + + ++++ + I Sbjct: 141 AALDETLSKLPIPKVMTYQRPDG--SNVQFVRPAHRLTAL-----HGDQVVPVSALGIDA 193 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 + T GHRF + +++Q D Y L + V+ + R+ I H LA A G ++V Sbjct: 194 DDTTLGHRFLSEGFVQIQHADSYADTLMHKGRVVPNFADRKETIRT--HLLAHADGDQVV 251 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F+ Sbjct: 252 MPESLLDEVTSLVEWPVVYACRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRSRFL 311 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 +VSNI+ + G I++GN RVV RL DA F+++D+ KP Sbjct: 312 IVSNIETATPGD-IIEGNERVVRPRLADAKFFFEQDKK--------------------KP 350 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L R+ L +VV+H K+G+ +R+ R+ L IA LI ADVAL RA L+KADL T Sbjct: 351 LADRVPLL--ANVVYHNKLGSALQRMERVEALAGAIAALIGADVALAKRAARLAKADLIT 408 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E A EH +PR + +P V+LADKL+ Sbjct: 409 DMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPGTATGTVVALADKLE 468 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------SQFI------- 529 TL+ W I +P+G KDP+ALRR LG++RI++E ++ + +QF Sbjct: 469 TLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLAVDFVELLRTAYAQFAAVPNVAD 528 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 Q + F DRL+ L +R I+A+L L IV + + EF + + Sbjct: 529 STQAIYDFSMDRLRGLLRERGHAPGEIDAVLALNPTRLDDIVARLDAVREFAALPEAASL 588 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KRI IL ++ +N S + P L+ AEK L+A + +Q + + Y Sbjct: 589 AAANKRISNIL--KKSENASASGGVQPALLVEAAEKALHAQLEQVAPRVQSQLAARDYTG 646 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 647 ALTALAALREPVDTFFNDVMVNAEDPSLRANRLALLGALHQQMNCVADISRLA 699 >gi|225848493|ref|YP_002728656.1| glycyl-tRNA synthetase subunit beta [Sulfurihydrogenibium azorense Az-Fu1] gi|225643863|gb|ACN98913.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 677 Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 212/720 (29%), Positives = 367/720 (50%), Gaps = 63/720 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKE--EGVIYQNMRQYWTPHRLFLYLKG 58 M +LLEI EE+P ++ + L + KE E N++ + TP RL + +K Sbjct: 1 MKTYLLEIGCEELPPKVILTYKDFLKQYVEESFKEFFEYDSPDNIKVFATPRRLAVLIKN 60 Query: 59 LSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P K + LGP + G KA F + + + +I+ + KG+ A Sbjct: 61 LREKQPPKQQVILGPPYKVAVDQEGKFTKAALSFAQKNNIPLENLQKIQNE--KGEYLGA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V+ + + ++ + ++P + P KSM W+ S + + RP++ ++ +L Sbjct: 119 VILQEGKDLKHHIMEVIPTLFKSFPQLKSMVWND-----SGYRFPRPIRWVVSLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRF-HAP----HPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 +++I + + T+ HRF AP ++ + Y + ++ + E R+N Sbjct: 169 DDEVIPFSVAGVNADRYTHLHRFMTAPVGRGEKKQINHSNEYEEITKLGFIIANFEDRKN 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI A ++ +++ED+DLL+EI L E+ +G F +YL LP+E+I K + Sbjct: 229 AIKTQYEGFARSLDAQIIEDQDLLDEITCLTEFPVGIVGDFSPEYLILPDEVIITVCKHH 288 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ ++ ++G L F+ SN+ D I G +V+ ARLEDAL F+K D Sbjct: 289 QR-YLNFKKDGKLIPKFLAFSNVAVKDRDV-IKNGYEKVLKARLEDALFFYKED------ 340 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID- 405 L + L+ + +L + FH K+G+ ++V R L K IA+ I Sbjct: 341 --------------LKQKLEDNVEKLK--GIQFHEKLGSLYDKVIRNLDLAKIIAKEIGY 384 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D ++RA++LSKADL T +V+EF ELQG +G YA+ Q E+ AI EH P+ Sbjct: 385 TDETKIERAVLLSKADLLTNMVKEFDELQGIMGMYYALKQGEDREVAKAIYEHYLPKTAD 444 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +++P + ++LADK+DT+++F++I E P S DP+A+RR +GI+R+++E +IDI L Sbjct: 445 DDLPQTTLGTILALADKIDTVVSFFSIGEIPKASADPFAVRRNAIGIVRLLVEKEIDIDL 504 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 S+ I+D+ ++ F RL+ YL + R D+I A+L ++ NL +K L + + Sbjct: 505 SKIIKDEKVLDFLLGRLESYLQSKGYRTDIINAVLSLKDANLYRNYLKVKALTKIINLPD 564 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY---AVISDFGTHIQESM 642 E + KR+ I+ + +L +P EK+LY +V+ D + ES Sbjct: 565 YESVIQVFKRVGNIIPEGFTGCVDQTLLENP------YEKQLYDKVSVVKDEYLKLIESK 618 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D++ +G L+ + I+ FFD V++ V+D +++ NRLSLL+ I ++ + + KIV Sbjct: 619 DYE--GALGKLIE-LKPYIDKFFDNVMIMVEDEKIKQNRLSLLKQINDLFRYLGDFTKIV 675 >gi|50914778|ref|YP_060750.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10394] gi|73919752|sp|Q5XAJ6|SYGB_STRP6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|50903852|gb|AAT87567.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10394] Length = 679 Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 206/704 (29%), Positives = 342/704 (48%), Gaps = 90/704 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + V + + +P SM W+ ++F +IRP+ ++ +L E +I Sbjct: 132 GVTEV-LSAMTFPVSMHWAN-----NSFEYIRPVHTLTVLLDDEALDLDF-----LDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGKE-TTITSADSYEDDLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFVS 299 Query: 306 V--SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESALKFNLDLS 362 V N QA + +++GN +V+ ARLED FW+ DQ + +L Sbjct: 300 VRNGNDQAIEN---VIKGNEKVLVARLEDGEFFWREDQKLQIADL--------------- 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 +A+L +V FH KIG+ E + R RV+ +A+ L + A VDRA + K Sbjct: 342 ------VAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++L Sbjct: 394 FDLLTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAGGALPETKVGAVLAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 454 ADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDS 513 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 N I D++ +DIR EAIL + + +++ Sbjct: 514 LAYTNKADVMNFIRARVDKMMGKAAPKDIR----EAILAS---STFVVPEMLAVAEALVK 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 ++ E + + + + + + EK + S+ + P E E L+A I ++ Sbjct: 567 ASHTENYKPAVESLSRAFNLAEKAD--ASVHVDPSLFENEQENTLFAAIQGL------TL 618 Query: 643 DHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRLSLL 685 Q+ + + P I FFD +V +D+ +++NRL++L Sbjct: 619 AGSAAQQLEQVF--VLSPVINDFFDNTMVMAEDQALKNNRLAIL 660 >gi|227514582|ref|ZP_03944631.1| glycine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227086993|gb|EEI22305.1| glycine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 692 Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 208/738 (28%), Positives = 356/738 (48%), Gaps = 91/738 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL+ Sbjct: 5 YLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E GP G KA GF R G T+ D + K+ KG Y+ V + Sbjct: 65 PDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQG-ATVDDIEFKE--VKGVEYVYVEKHI 121 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +++VL + V I + +P MRW + ++IRP+ ++ +L +++ Sbjct: 122 QGKPVDEVLAGLNDV-ITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL-----DDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + D+ + G +T GHRF H ++++S Y+ L++ V++D R+ I + + Sbjct: 171 VPFDILNVTAGRLTRGHRFLG-HDVEIKSATDYVAALKDDFVIVDAAERKATIKDQIQAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F R Sbjct: 230 VDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFCVRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N G A +++GN RV+ RLEDA F+ DQ Sbjct: 290 DGKLQPAFISVRN-----GNAVHLDNVIKGNERVLVPRLEDAKFFFDEDQK--------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +DQ + RL +V FH +I + ++++R + L + Q L D ++ Sbjct: 336 -----------MTIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P + Sbjct: 383 ADLARAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 443 PQTTVGAVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDF 502 Query: 529 -------IEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 +E L FF DRLK +RHD+++A+ + Sbjct: 503 QASAKQAVEQATPALGLDYAKNADAVTDFFIDRLKQLFSLEHLRHDIVDAVTDTHVTDPA 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRL 627 IV+ L+ A + + + R+ ++ A K N E +++ P +E +L Sbjct: 563 AIVEAAHVLDAHKDDADLKDQVEALTRVIRLAA---KGNLSEDDVKVDPSLFENPSEGQL 619 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSL 684 +Q +D K + ++ E I ++F++ ++ D V++NRLSL Sbjct: 620 -------DQAVQALIDAKEGRSLDQQFSALLELEPVISLYFEENMIMDKDEAVKNNRLSL 672 Query: 685 LQYIKNIILIVINVQKIV 702 L + + N+ +++ Sbjct: 673 LTILADQTAAFGNLDQLI 690 >gi|56963450|ref|YP_175181.1| glycyl-tRNA synthetase subunit beta [Bacillus clausii KSM-K16] gi|81822137|sp|Q5WHD5|SYGB_BACSK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56909693|dbj|BAD64220.1| glycyl-tRNA synthetase beta chain [Bacillus clausii KSM-K16] Length = 693 Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 216/719 (30%), Positives = 344/719 (47%), Gaps = 73/719 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PAR + L+ + L ++G+ Y + Y TP RL + ++ L+ P+ +E GP Sbjct: 15 PARFVTPSITQLAEKVQAWLDDKGLSYGEIHSYATPRRLAILVENLADRQPDIHDESRGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 + GA KA GF + G++T S +IK V+ +K ++ VL Sbjct: 75 ALKIAKDESGAWTKAALGFAKGQGVET-SQLEIKAVNGTDYVFAKTHKKGEKT--SVLLP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I + +PKSMRW+T + + RP++ L L ED +I + I G Sbjct: 132 ELKELITGLTFPKSMRWNTY-----SLRYARPIQ-WLVALYGED----VIPFSINGIETG 181 Query: 187 NITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 T GHRF A P+ + Y L+ V+ D E R+ AI++ ++ + Sbjct: 182 RNTTGHRFLGADFPL--DNPIEYADALKRQYVIADAEERKAAIVSQLKQMEEEHSWVVPI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+ LLEE+ LVE+ GSFD +L LP+E++ T++ +Q+ F ++G L FI Sbjct: 240 DEALLEEVTQLVEYPTALSGSFDDSFLALPKEVLITTMREHQRYFPVEAKDGRLLPYFIT 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N + + +GN +V+ ARL DA F+ DQ K +L + Sbjct: 300 VRNGN-EEYIENVAKGNEKVLRARLSDAAFFYHEDQ--------------KISLQAAN-- 342 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 A+LD ++VFH IGT GE+V+RI L K +A L + V+RA ++K DL Sbjct: 343 ----AKLD--NIVFHEAIGTMGEKVARIGELSKWLAGEANLGAQERQTVERAAAIAKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EFPELQG++G+EYA E AI E PR + VP + ++LADK Sbjct: 397 VTYMVGEFPELQGRMGQEYAEKAGETPQVAKAIYEQYLPRYAGDKVPETEAGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-------------FI 529 LDT+++ ++I P+GS+DPYALRR GII I+L+ ++ + L F+ Sbjct: 457 LDTVVSCFSIGLIPTGSQDPYALRRQATGIIHILLQTEMPLTLENMAVHALDSIAKKGFM 516 Query: 530 ED------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q LI FF +RLK + + R+D+++A+L ++ T+ + L E Sbjct: 517 TEKVETTKQELISFFANRLKHVMLEAGFRYDIVDAVLAAPLVDVYTMFAKARLLTE---R 573 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 A+ +F + + ++ + +K + + +S E E RL A + + E+ Sbjct: 574 AEDREFKEVTESLSRVTNLAKKAPKGVF--VSENLFENETESRLLAATLEVEFGLAEAWK 631 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K + L I FFD +V D+ R+NRL+LL + I + QKIV Sbjct: 632 VKDAYAAYQALAQCRATINTFFDHTMVMADNEATRNNRLALLDRLAKSIQSYADFQKIV 690 >gi|256846627|ref|ZP_05552083.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_36A2] gi|256717847|gb|EEU31404.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_36A2] Length = 686 Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 202/726 (27%), Positives = 356/726 (49%), Gaps = 87/726 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKTNFERKLKNNRIKFSGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + G KA +GFL++ ++ IK D KG+ Y+A R Sbjct: 62 QEDLDELSIGPSRERAYKNGVLTKAGEGFLKAHRIEEEQIEIIKND--KGE-YIAFKRFS 118 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E +L I+ + + +PKSMRWS + RP++ L + +K+ Sbjct: 119 KGKPTETILPEILKALVLEETFPKSMRWSD-----KTIRFARPIEWFLALY-----GDKV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ I N + GHRF +V S++ Y++ + E V++D RR I Sbjct: 169 VDFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMI------- 220 Query: 236 ASAVGLELVEDKD------LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + L+ED+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ Sbjct: 221 EEMINNSLLEDEKADVDEALLDEVTNLVEHPFAIVGNFSEDFLEVPQEVLIISMKVHQRY 280 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 281 FPVLSKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED--------- 329 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L PLD + +L VVF +GT ++V R + + + + + + Sbjct: 330 -----------LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYM 376 Query: 410 LVD--RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR Sbjct: 377 KEDILRTVKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIKEHYYPRFQG 436 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II++ +DI L Sbjct: 437 DLLPSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIIKANLDISL 496 Query: 526 SQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 ++ + +++ F R+ D R D+I ++L + DN Sbjct: 497 KDLVKVSLDALEADKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADN 556 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + +++++ + E S K + L + KR+F I+ K +++++ I + + EK Sbjct: 557 ITNALEIVRVITEKLSKDKMQALLQTVKRVFNIM----KGSKDVT--IKEKLFKNDIEKT 610 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY +++++ K Y + L ++ I+ +FD V+V +D+ VRDNR+ L Sbjct: 611 LYTESKKVEEEVEKAIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRIGQLT 670 Query: 687 YIKNII 692 YI N+ Sbjct: 671 YIMNLF 676 >gi|153830859|ref|ZP_01983526.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 623-39] gi|148873669|gb|EDL71804.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 623-39] Length = 688 Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 204/720 (28%), Positives = 338/720 (46%), Gaps = 64/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L+ Sbjct: 4 EFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVTNLAES 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 QPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFKEQV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + V+ + A+ +P K MRW + +IRP+K++ + +E + Sbjct: 122 QGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE-----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + GHRF ++S + Y LEE V+ D R+ I+ + + Sbjct: 172 IQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEGSQQ 231 Query: 235 LASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + +ED L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAQQLGGIADLEDA-LVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + IV+GN +VV RL DA F Sbjct: 291 DASKKLLPNFIFVSNIESKEP-RHIVEGNEKVVRPRLADAEFF----------------- 332 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN D +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV R Sbjct: 333 ---FNTDRKRPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFSGDELPSRGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAKAK 506 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +Q +I F R + D D+I+A+L +K ++ Sbjct: 507 SLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KR+ ILA K + ++ EI L +AEK L + + Sbjct: 567 HFRALEEAEALAAANKRVGNILA---KYDGKLGEEIDLALLQEDAEKALAEAVEIMAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 683 >gi|238757318|ref|ZP_04618504.1| Glycyl-tRNA synthetase beta subunit [Yersinia aldovae ATCC 35236] gi|238704357|gb|EEP96888.1| Glycyl-tRNA synthetase beta subunit [Yersinia aldovae ATCC 35236] Length = 689 Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 203/718 (28%), Positives = 328/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDSANLPHGEVVWYAAPRRLALKVINLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 ADREVEKRGPAIAQAFDTEGKPSKAAEGWARGCGITVDQAERLVTDKGEWLLYRAHVKGQ 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E ++ Sbjct: 126 SAQL--LLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSEVIPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D I GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 179 GID-----SDRIIRGHRFMGEAEFTIDNADQYPQILLERGKVIADYELRKTIIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQQIGGIADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 294 AGNLMPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ + RL+ V+F ++GT + RI+ L +A I ADV RA Sbjct: 340 -------KRLEDNLPRLET--VLFQQQLGTLRHKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + D D I+A+L +K + F Sbjct: 511 YGSKLTNSKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSTDTLNDHVRASVLKEPAELKLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 VFAAGQYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADI 685 >gi|148265692|ref|YP_001232398.1| glycyl-tRNA synthetase subunit beta [Geobacter uraniireducens Rf4] gi|189082268|sp|A5G7Q7|SYGB_GEOUR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146399192|gb|ABQ27825.1| glycyl-tRNA synthetase beta chain [Geobacter uraniireducens Rf4] Length = 688 Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 203/726 (27%), Positives = 337/726 (46%), Gaps = 68/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LEI +EEIPA KA ++ ++ L + + ++ TP RL L + ++ Sbjct: 4 ELFLEIGTEEIPAGFLPKAMAEMEGLIRKELDNARIAFGEVKAMATPRRLALVVSQVAGQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + +GP G +A +GF R G++ + + + KG+ Y+AV +K Sbjct: 64 QADAEITAMGPAKKVAFNEDGTPTRAGEGFARGQGVEPSALSIVVTE--KGE-YVAVTKK 120 Query: 116 PKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L I+P I + + KSMRW + RP+ I+ + Sbjct: 121 ETGVPTVGLLGEILPRLINNISFKKSMRWGDLD-----VRFARPVHWIVALF-----DGI 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I G ++ GHRF A V+ HY+ + E V+ DP R+ I + HR Sbjct: 171 VVPFSFGNIESGTMSRGHRFMANTSFPVRDFTHYLDECERHFVIPDPAKRKEIIRREIHR 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A A G L+ D+ LLE++ LVE+ G+F ++L +P E++ +++ +Q+ F Sbjct: 231 VAKAAGGRLLPDEGLLEQVTYLVEYPSAVHGTFSAEFLVVPREVLITSMREHQRYFSLVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++N D + +V+GN RV+ ARL DA F+ D+ Sbjct: 291 DNGKLLPGFITINNTLTEDP-SVVVKGNERVLRARLSDARFFFDEDKK------------ 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDR 413 PL+ R+ L V++ AK+GT E++ R R L + +A+ + + V + Sbjct: 338 --------VPLENRVESLK--SVLYQAKLGTSYEKMERFRALAEGVAEELQPGLKEKVSQ 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL T +V EFPE+QG +G+EYA LQ + +AI EH P +P + I Sbjct: 388 AATLCKADLVTGMVGEFPEVQGIMGREYAFLQGIDPGVANAIAEHYLPTQAGGELPASDI 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 VS+ADKLDT+ +++ P+GS DPYALRRA LGII II+ + L+ + Sbjct: 448 GAFVSIADKLDTICGCFSVGLIPTGSADPYALRRAALGIINIIVAKGYALQLTTLVSKAL 507 Query: 533 ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ FF R + DR D+++A++ D+L+ I+ Sbjct: 508 ARLEGKLTRKKEEVFGDVMDFFQGRFVNLMTDR-FPADVVDAVVAVSFDDLVDTAAKIEA 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L F E ++ KR+ I+ L+ +AE L+ Sbjct: 567 LAVFKKRPDFEPLAVAFKRVCNIVKGPVVVVGVNELDFEE-----DAEGTLHRAYHSVAG 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y + ++ ++ FFD V+V +D VR+NRL+LLQ IK + + Sbjct: 622 TVAAKVAERDYLAALTQIATLKGAVDDFFDNVMVMAEDERVRNNRLALLQEIKGLFRDIA 681 Query: 697 NVQKIV 702 + KI Sbjct: 682 DFAKIT 687 >gi|300361840|ref|ZP_07058017.1| glycyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] gi|300354459|gb|EFJ70330.1| glycyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] Length = 690 Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 209/734 (28%), Positives = 355/734 (48%), Gaps = 83/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSRSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ +L +E Sbjct: 121 KEGKKASDILMGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ D + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLGDSVV-LANADDYEEALKSQYVIADADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRN-GNSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + + ++ Sbjct: 335 -------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNISETEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P ++P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLTGEDENVSVAIKESYMPTSAEGDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ + Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPVKDVLPE 505 Query: 530 -----------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E +N I F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N + ++ +E+ L A + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---AAKVDESLFQDVSEEELNAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++E+ D I DL E I +F+ ++ D +V++NRL+ L + Sbjct: 623 N----ALEENTD----LSIADLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKV 674 Query: 689 KNIILIVINVQKIV 702 N+ + ++ K+V Sbjct: 675 NNLADRMGDLSKLV 688 >gi|312143994|ref|YP_003995440.1| glycyl-tRNA synthetase, beta subunit [Halanaerobium sp. 'sapolanicus'] gi|311904645|gb|ADQ15086.1| glycyl-tRNA synthetase, beta subunit [Halanaerobium sp. 'sapolanicus'] Length = 689 Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 215/727 (29%), Positives = 361/727 (49%), Gaps = 73/727 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + + EI +EE+PA K D + + Y+ + Y TP RL L +K L+ Sbjct: 7 NLIFEIGTEEMPAESMKKFRIDYLECAKEIFANNNLEYEAINVYSTPRRLVLSIKNLAEK 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E GP V G KA GF R G++ ++D ++KD G +Y + K Sbjct: 67 QKDKRESVRGPAVNIAYDENGEATKAGQGFARGQGVE-VADL-VEKD---GYLYAEKVEK 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K +D+L I+ ++KVP PK+MRW + +IRP+K +L + E+ Sbjct: 122 GK-ASKDILADILKSIVKKVPLPKAMRWGSVK-----MEFIRPIKWLLALF-----GEEK 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 IDL++ ++ + GHRF + +K++ D Y L++ +++ RR I + +L Sbjct: 171 IDLEIADVNSEVFSLGHRFLSEGKVKIKHADTYFNILQDNYIIVKEGTRRKIIKDQIEKL 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + G ++++ LL+E++ LVE+ F G F ++YL LP+E++ ++ +Q+ F + Sbjct: 231 -NLSGKAVIKES-LLDEVVDLVEYPTAFKGQFSEEYLELPDEVLITAMEKHQRYFPVKAN 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN-NLPNLSSLKESA 354 G L FI V + SD A ++ GN V+ RL+DA F+ DQ N S Sbjct: 289 -GELKAEFIGVRD-GGSDYLAEVIAGNEMVLKGRLDDAQFFFAEDQKYGFINRSE----- 341 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 D+ D+VF +G+ ++V ++ + ++A ++ ++A Sbjct: 342 ------------------DIKDIVFQQDLGSVNDKVQKLEEITSELADKLNYRADKKEKA 383 Query: 415 I---VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 + LSK DL TE+V EF LQG +G+EYA+L E +AI EH PR +++P Sbjct: 384 VRAAELSKNDLATEMVNEFANLQGIMGREYALLAGEAEETAEAIYEHYLPRYAGDSLPKT 443 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID------IPL 525 +++A+KL L + + + PSGS+DP+ALRR G++RIIL ++ I + Sbjct: 444 DSGKLLAMAEKLFNLSSHFLLGNIPSGSQDPFALRRQATGLLRIILAEELSINILEIIKM 503 Query: 526 SQFIEDQN----------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 S I D N L F RL+ L D +IR+D+I A++ +++ + I + Sbjct: 504 SMKIVDINKSTVNEVSLKLKEFIKQRLENLLSDLEIRYDIINAVIDVNDNDFVDIYQRAE 563 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L E F S + F+ + + + I E N + EI+ L + EK+LY V Sbjct: 564 KLME-FRSQNPQLFVDLVRGLVRAKNISE--NLDSKSEINAGLLTKDEEKQLYEVYQKNQ 620 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 I++ K Y + LL + E I+ F D V+V V+D E++ NRLS+L I +++ V Sbjct: 621 PLIKDHFAKKEYKKGFYLLVELKEDIDKFLDNVMVMVEDEELKKNRLSILSEISDLMREV 680 Query: 696 INVQKIV 702 IN+++I Sbjct: 681 INIEEIA 687 >gi|260662167|ref|ZP_05863063.1| glycyl-tRNA synthetase beta subunit [Lactobacillus fermentum 28-3-CHN] gi|260553550|gb|EEX26442.1| glycyl-tRNA synthetase beta subunit [Lactobacillus fermentum 28-3-CHN] Length = 692 Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 208/738 (28%), Positives = 356/738 (48%), Gaps = 91/738 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL+ Sbjct: 5 YLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E GP G KA GF R G T+ D + K+ KG Y+ V + Sbjct: 65 PDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQG-ATVDDIEFKE--VKGVEYVYVEKHI 121 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +++VL + V I + +P MRW + ++IRP+ ++ +L +++ Sbjct: 122 QGKPVDEVLAGLNDV-ITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL-----DDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + D+ + G +T GHRF H ++++S Y+ L++ V++D R+ I + + Sbjct: 171 VPFDILNVTAGRLTRGHRFLG-HDVEIKSATDYVAALKDDFVIVDAAERKATIKDQIQAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F R Sbjct: 230 VDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFCVRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N G A +++GN RV+ RLEDA F+ DQ Sbjct: 290 DGKLQPAFISVRN-----GNAVHLDNVIKGNERVLVPRLEDAKFFFDEDQK--------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +DQ + RL +V FH +I + ++++R + L + Q L D ++ Sbjct: 336 -----------MTIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P + Sbjct: 383 ADLARAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 443 PQTTVGAVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDF 502 Query: 529 -------IEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 +E L FF DRLK +RHD+++A+ + Sbjct: 503 QASAKQAVEQATPALGLDYAKNADSVTDFFIDRLKQLFSLDHLRHDIVDAVTDTHVTDPA 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRL 627 IV+ L+ A + + + R+ ++ A K N E +++ P +E +L Sbjct: 563 AIVEAAHVLDAHKDDADLKDQVEALTRVIRLAA---KGNLSEDDVKVDPSLFENPSEGQL 619 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSL 684 +Q +D K + ++ E I ++F++ ++ D V++NRLSL Sbjct: 620 -------DQAVQALIDAKEGRSLDQQFSALLELEPVISLYFEENMIMDKDEAVKNNRLSL 672 Query: 685 LQYIKNIILIVINVQKIV 702 L + + N+ +++ Sbjct: 673 LTILADQTAAFGNLDQLI 690 >gi|319796019|ref|YP_004157659.1| glycyL-tRNA synthetase, beta subunit [Variovorax paradoxus EPS] gi|315598482|gb|ADU39548.1| glycyl-tRNA synthetase, beta subunit [Variovorax paradoxus EPS] Length = 711 Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 224/740 (30%), Positives = 358/740 (48%), Gaps = 77/740 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E++ EE+P + K + + +L L +G+ + Y +P RL +L ++ Sbjct: 7 LLVELFVEELPPKALKKLGDAFAGVLRDQLVAQGLAEAGSVLIAYASPRRLAAHLTHVAE 66 Query: 62 HSPEK-IEERLGP-RVG--AGKKAIDGFLRSTGL-----QTISDCQIKKDPKKGDVYLAV 112 + +K + ++L P VG A + L+ G + + D K ++ Sbjct: 67 RAADKAVSQKLMPVAVGLDASGQPTPALLKRLGALGADASAVPGLKRAMDGKAEALFYES 126 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW---STTHSPI-SAFSWIRPLKSILCILVA 168 K L E + K + AI K+P PK M + S P S+ S++RP ++ + Sbjct: 127 TAKGATLAEGLQKALAE-AIAKLPIPKVMSYQLESGCELPGWSSVSFVRPAHGLVAL--H 183 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEE-AMVLLDPECRRN 226 DA I L LK G T+GHRF A P+ ++ + Y L++ V+ E RR Sbjct: 184 GDAVVPIEALGLK---AGRETHGHRFEAAVDPVVLRDANSYALQLQDDGAVIASFEARRA 240 Query: 227 AILNDAHRLASAV-----GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRL 281 I A +LA+A G + D LL+E+ LVE V + SF++++L +P+E + L Sbjct: 241 EI---ARQLAAAAVKVGGGSVPIHDDALLDEVTALVERPNVLVCSFEREFLEVPQECLIL 297 Query: 282 TIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 T+K NQK F L N F++VSNI D +A+++GN RVV RL DA F+ DQ Sbjct: 298 TMKANQKYFPLLDASSKLTNKFLVVSNISPDDA-SAVIEGNERVVRPRLADAKFFF--DQ 354 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA 401 + +L+S ES K VV+H K+GTQGERV R+ + + IA Sbjct: 355 DRKKSLASRVESLGK--------------------VVYHNKLGTQGERVQRVMHIARGIA 394 Query: 402 QLID--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 + + A +A L+KADL T++V EFPELQG +G+ YA+ + + DAIE+H Sbjct: 395 EKLGDAKVAAQATQAAQLAKADLVTDMVGEFPELQGTMGRYYALHDGLDAAVADAIEDHY 454 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 KPR + +P N + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E Sbjct: 455 KPRFAGDELPRNSVGLVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLIEK 514 Query: 520 KIDIPLSQFIEDQ-----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + + L ++D L F DRL L ++ ++A+L P Sbjct: 515 DLALGLDTLLQDAAAQFKDIAGFDSSKATVELRDFILDRLAGSLREQGASAQEVDAVLAP 574 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 L + L+ + F + + KRI IL KK E +S L Sbjct: 575 LPQRLGEVPKLLAAVRAFAALPAAAALAAANKRIGNIL----KKAPEADAHVSELLLQEP 630 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AEK L+A +++ + Y L ++ EP++ FFD V+VN + ++R NRL Sbjct: 631 AEKALHAAMAEVVPAANVQFEAGDYTGSLQTLAALREPVDAFFDGVMVNAEQADLRLNRL 690 Query: 683 SLLQYIKNIILIVINVQKIV 702 LL + + V ++++ Sbjct: 691 GLLMSLHTAMNRVAQLERLA 710 >gi|312797215|ref|YP_004030137.1| glycyl-tRNA synthetase beta chain [Burkholderia rhizoxinica HKI 454] gi|312168990|emb|CBW75993.1| Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) [Burkholderia rhizoxinica HKI 454] Length = 700 Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 200/681 (29%), Positives = 332/681 (48%), Gaps = 60/681 (8%) Query: 46 YWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQ 98 + TP RL + ++ + +P++ + E++ P G + L + G + Q Sbjct: 55 FGTPRRLAVTIRNVRAVAPQRQVREKVLPVSVALDANGQPSAPLAKKLAALGFPDMPLTQ 114 Query: 99 IKKD-PKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIR 157 +++ K + + P +ED L+ + + K+P PK M + + ++R Sbjct: 115 LERAMDGKTEAFFLNYAAPGVTLEDGLQAALDETLAKLPIPKVMTYQRPDG--TNVQFVR 172 Query: 158 PLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AM 216 P ++ + ++I+ + + +T GHRF + + + Y R LE+ Sbjct: 173 PAHRLVAL-----HADRIVPVSALGLDADAVTLGHRFLSEGHVAILHAHDYARTLEQRGK 227 Query: 217 VLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPE 276 V+ + R+ AI A L A ++ + LL+E+ LVEW V+ FD +L +P+ Sbjct: 228 VIASMQARKEAI--RAQLLERAGADHVLMPEALLDEVNALVEWPIVYECRFDDAFLQVPQ 285 Query: 277 ELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHF 336 E + LT++TNQK F G L + F++VSN+Q +D IV GN RVV RL DA F Sbjct: 286 ECLILTMQTNQKYFALTDAGGKLRSRFLVVSNVQ-TDTPQQIVLGNERVVRPRLADAKFF 344 Query: 337 WKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL 396 +++DQ K L+QR+ L +VV+H K+G+Q +RV R+ L Sbjct: 345 FEQDQK--------------------KTLEQRVPLL--ANVVYHNKLGSQLQRVERLEAL 382 Query: 397 GKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 IA + D RA L+KADL T++V EFPELQG +G YA E A Sbjct: 383 AAVIAPSVGVDAQRAARAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPDDIALACS 442 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH +PR + +P+ IS V+LADKL+TL+ W I +P+G KDP+ALRR LG++RI+ Sbjct: 443 EHYRPRFAGDALPSTAISTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGVLRIV 502 Query: 517 LENKIDIPL--------SQF-----IEDQNLIL--FFHDRLKLYLHDRDIRHDLIEAILR 561 LE ++ + L +QF + D L FF DRL+ L +R + ++A+L Sbjct: 503 LEKQLPLDLIDLLRHAYAQFAAQPQVADPTSALHGFFIDRLRGLLRERGYDANEVDAVLS 562 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 + I + + EF + + + KRI IL KK+ + + + L+ Sbjct: 563 QNPTRIDDITGRLDAVREFATLPEAASLAAANKRITNIL----KKSDGAAQHVETKLLME 618 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 AE+ L+ + + +Q + + Y L S+ + ++ FF+ V+VN DD +R NR Sbjct: 619 PAERALFEQLHNVTPTVQGRLSSRDYTGALSALASLRDAVDTFFNDVMVNADDAALRANR 678 Query: 682 LSLLQYIKNIILIVINVQKIV 702 L LL + ++ V ++ K+ Sbjct: 679 LGLLARLHELMHCVADISKLA 699 >gi|225859236|ref|YP_002740746.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae 70585] gi|254781863|sp|C1C870|SYGB_STRP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225720159|gb|ACO16013.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae 70585] Length = 678 Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 208/696 (29%), Positives = 345/696 (49%), Gaps = 75/696 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGL-TVEDIEFRE--IKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV V ++ + +P SM W+ ++F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIVDV-LKSLTFPVSMHWAG-----NSFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + + + Sbjct: 181 SRVSRGHRFLGKE-TKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHDVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + +S L E K N Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--ISDLVE---KLN------- 346 Query: 366 DQRMARLDMLDVVFHAKIGTQGE---RVSRIRVLGKKIAQL-IDADVALVDRAIVLSKAD 421 +V FH KIG+ E R +I VL + A L +D V L RA + K D Sbjct: 347 ----------NVTFHEKIGSLREHMIRTGQITVLLAEKADLSVDETVDLA-RAAAIYKFD 395 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++AD Sbjct: 396 LLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIAD 455 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF---- 537 KLDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ + F Sbjct: 456 KLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLT 515 Query: 538 FHDRLKL--YLHDR------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ ++ ++ R D+ EA+L N + D+++ + +K E F Sbjct: 516 YENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSN---FVVADMLEAASALVEVSKEEDF 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 S + + + + EK E + + EK L + S K+ Sbjct: 573 KPSVESLSRAFNLAEKA--EGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQ--- 627 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L ++ I+ FF+ +V +D+ VR NRL++L Sbjct: 628 ----LFALSPVIDAFFENTMVMAEDQAVRQNRLAIL 659 >gi|238783054|ref|ZP_04627081.1| Glycyl-tRNA synthetase beta subunit [Yersinia bercovieri ATCC 43970] gi|238716055|gb|EEQ08040.1| Glycyl-tRNA synthetase beta subunit [Yersinia bercovieri ATCC 43970] Length = 689 Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 205/718 (28%), Positives = 328/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDSANLPHGEVIWYAAPRRLALKVVNLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTDKGEWLLYRAHVKGE 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E ++ Sbjct: 126 SAQL--LLAGMVNAALAKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSELIAGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D I GHRF + + + Y + L E V+ D E R+ I DA Sbjct: 179 GID-----SDRIIRGHRFMGEAEFALDNAEQYPQALLERGKVIADYELRKAIIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDT 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGNLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N I+ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPIAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + D D I+A+L +K + F Sbjct: 511 YGSKLTNAKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSTDTLNDHVRASVLKDPAELKLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E I+ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 IFAAGQYKEALVELAALRETIDEFFDSVMVMAEDDAVRINRLTLLSKLRELFLQVADI 685 >gi|116629753|ref|YP_814925.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri ATCC 33323] gi|282851790|ref|ZP_06261153.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 224-1] gi|311110605|ref|ZP_07712002.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri MV-22] gi|122273309|sp|Q042Y5|SYGB_LACGA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116095335|gb|ABJ60487.1| glycyl-tRNA synthetase beta chain [Lactobacillus gasseri ATCC 33323] gi|282557032|gb|EFB62631.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 224-1] gi|311065759|gb|EFQ46099.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri MV-22] Length = 690 Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 209/734 (28%), Positives = 354/734 (48%), Gaps = 83/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSRSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ +L +E Sbjct: 121 KEGKKASDILMGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ D + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLGDSVV-LANADDYEEALKSQYVIADADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRN-GNSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + +L +V FH KIG+ E ++R+ ++G + + + + ++ Sbjct: 335 -------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVHIIGDYLGKKFNISETEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P ++P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLTGEDENVSVAIKESYMPTSAEGDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ + Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPVKDVLPE 505 Query: 530 -----------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E +N I F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N + ++ +E+ L A + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---AAKVDESLFQDVSEEELNAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++E+ D I DL E I +F+ ++ D +V++NRL+ L + Sbjct: 623 N----ALEENTD----LSIADLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKV 674 Query: 689 KNIILIVINVQKIV 702 N+ + ++ K+V Sbjct: 675 NNLADRMGDLSKLV 688 >gi|221194456|ref|ZP_03567513.1| glycyl-tRNA synthetase, beta subunit [Atopobium rimae ATCC 49626] gi|221185360|gb|EEE17750.1| glycyl-tRNA synthetase, beta subunit [Atopobium rimae ATCC 49626] Length = 697 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 221/734 (30%), Positives = 338/734 (46%), Gaps = 87/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI +EE+P+ KA +++ L E G+ + R TP RL Y+K ++ Sbjct: 6 DFLLEIGTEEMPSAPLLKAVAQYKKLIVSGLDEAGLAHGEARIISTPRRLSAYVKDVALA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E E GP+ G KA GF R G+ S+ + D + A Sbjct: 66 TEEINEVMRGPKCEIAFDAEGNPTKAALGFARKAGMDA-SELTRRVDDDGHEYVFAQRII 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L + I + WP+S RW +TH ++RP++ I +L E + Sbjct: 125 PSVSAIKILSELSERIIPAIDWPRSQRWGSTHE-----RFVRPIRWICALLGTE-----V 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ N T GHR V HY + LE A VL E RR+ IL+ R+ Sbjct: 175 VPVTYADVISSNTTQGHRVLGSGTHVVDESSHYEQVLEAAYVL-SAERRRSVILDGIARI 233 Query: 236 ASA-VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 G + + +L+E+I L EW V +G+FD+++L +P E+I ++ +NQ+ F Sbjct: 234 EEERPGFHVDTPQKVLDEVINLTEWPSVLVGTFDEEFLKVPHEIITESMLSNQRYFPIYD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L F++VSN + ++ GN RVV ARL+DA F++ D LK S Sbjct: 294 ANGELTREFVIVSNGNPA-CSQQVIDGNERVVRARLDDAKFFFEED---------LKHSL 343 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI----DADVAL 410 +F +LS DVVF K+GT ++V RI + +AQ D V Sbjct: 344 DEFTGELS-------------DVVFQEKLGTVLQKVERIEKIAAFLAQADSENDDTVVEH 390 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL ++ V EF QG +G YA E+ DAI EH +PR + +P+ Sbjct: 391 AHRAAHLSKADLVSQAVVEFTSQQGVMGGYYAKAAGESPDVADAIREHYRPRFAGDELPS 450 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------LENKIDI 523 I V+ ADKLDT+ +AI+E P+GS DPYA+RRA +G+I ++ L++ I Sbjct: 451 GPIGRYVAAADKLDTICGLFAIDEPPTGSSDPYAVRRAAIGVIALLRTMPNVRLKDCIRY 510 Query: 524 PLSQFIE----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L + E + + +F RL D I + I+A+ + ++D Sbjct: 511 ALDLYTEQGLQFDTVKVQREVEAYFLGRLVTIARDEKISQEAIDAVAH------INVID- 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRI-----FQILAI---EEKKNREISLEIS-PQYLLLEAE 624 EF + L RI F+ LAI K +ISL + +L +E Sbjct: 564 ---PEEFLRRTRA----LDDARIEDPENFENLAIAYNRASKLGDISLGTDVNESILTASE 616 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + L + ++Q+++ + L + +PI+ FFD VLV DD VR NRL L Sbjct: 617 QALLDACKEGEKNVQDALTDNDFRSATRALGKLRKPIDKFFDDVLVMDDDTTVRGNRLRL 676 Query: 685 LQYIKNIILIVINV 698 L + V ++ Sbjct: 677 LNRFTQVFEHVADI 690 >gi|238853402|ref|ZP_04643781.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 202-4] gi|238833974|gb|EEQ26232.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 202-4] Length = 690 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 209/734 (28%), Positives = 354/734 (48%), Gaps = 83/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVSRSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + E + GP + G KA GF R G+ T I + KG Y V ++ Sbjct: 64 QDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTT---DDIYFEELKGTEYAYVHVQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + D+L + + I+ + +P MRW + F ++RP+ ++ +L +E Sbjct: 121 KEGKKASDILMGMSDI-IKAMTFPTKMRWDSND-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ D + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLGDSVV-LANADDYEEALKSQYVIADADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N S+ ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRN-GNSEYLDNVIAGNEKVLVARLDDAQFFYDEDK------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 PL + +L +V FH KIG+ E ++R+ ++G + + + + ++ Sbjct: 335 -------KYPLAHFVDKLK--NVSFHDKIGSVAEHMARVHIIGDYLGKKFNISETEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P ++P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLTGEDENVSVAIKESYMPTSAEGDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ + Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPVKDVLPE 505 Query: 530 -----------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E +N I F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N + ++ +E+ L A + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---AAKVDESLFQDVSEEELNAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++E+ D I DL E I +F+ ++ D +V++NRL+ L + Sbjct: 623 N----ALEENTD----LSIADLYKGFVELQPVINHYFESNMILDKDEKVKNNRLAQLLKV 674 Query: 689 KNIILIVINVQKIV 702 N+ + ++ K+V Sbjct: 675 NNLADRMGDLSKLV 688 >gi|238787798|ref|ZP_04631595.1| Glycyl-tRNA synthetase beta subunit [Yersinia frederiksenii ATCC 33641] gi|238724141|gb|EEQ15784.1| Glycyl-tRNA synthetase beta subunit [Yersinia frederiksenii ATCC 33641] Length = 689 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 203/718 (28%), Positives = 328/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVIWYAAPRRLALKVINLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVEQAERLVTDKGEWLLYRAHVKGQ 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E ++ Sbjct: 126 SAQL--LLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSELIPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D + GHRF + D Y + L E V+ D E R++ I DA Sbjct: 179 GID-----SDRVIRGHRFMGEAEFTLDHADQYPQVLLERGKVIADYELRKSIIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDT 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + D D I+A+L +K + F Sbjct: 511 YGAKLTNAKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E I+ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 VFAAGQYQEALVELAALRETIDEFFESVMVMAEDDAVRINRLTLLSKLRELFLQVADI 685 >gi|320160283|ref|YP_004173507.1| glycyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319994136|dbj|BAJ62907.1| glycyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 998 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 217/731 (29%), Positives = 339/731 (46%), Gaps = 79/731 (10%) Query: 2 PD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 PD FLLEI +EE+PA A E L + LL E + + ++ TP RL + ++ LS Sbjct: 313 PDLFLLEIGTEELPAADLQSALEQLREKVPALLDELRLSHGEVKVMGTPRRLAVLVENLS 372 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P P++ GP G KA +GF RS GL +S ++++ V V Sbjct: 373 PAQPDRTTVVKGPPAARAFDAQGQPTKAAEGFARSRGLD-VSALKVQEIDGGQYVVAEVF 431 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K + + DVL +P I + + K+MRW+ + AFS RP++ + +L Sbjct: 432 EKGRSAV-DVLSEALPDLIASLRFDKTMRWNASQV---AFS--RPIRWLAALL-----GS 480 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I + + +T G RF+ P + + Y L +LLDPE RR +I Sbjct: 481 TVIPFEYAGLRADRVTRGLRFYQPETFTLNTAAEYQNVLRSQGILLDPEERRASIAEQVQ 540 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 RL + G D+ LL+E+ LVE +G+FD +L LP E++ +K +Q+ F Sbjct: 541 RLMTEAGGVPKLDESLLDEVTQLVEAPTAVLGTFDPAHLKLPAEVLISVMKKHQRYFPVY 600 Query: 294 TREGVLANCFILVSNI--QASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V N Q D + GN++V+ AR DA F + D Sbjct: 601 ASTGELLPYFITVRNGDNQYLD---IVADGNAQVIGARFADASFFIQED----------- 646 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADV 408 LK+ L+ +R+ RL L F K+G+ ++ R+ L K+A L +D+ Sbjct: 647 ---LKYTLE------ERLPRLGTL--TFQYKLGSMLDKSRRVEALVDKLAPFFGLSQSDL 695 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA L KADL T +V E LQG +G+ YA E DAI EH PR + + Sbjct: 696 ATARRAAYLLKADLVTHMVIEMTSLQGIMGRYYAEHSGEPKGVADAIFEHYLPRFAGDAL 755 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI------- 521 P I +S+AD+LDTL +A PSG+KDP+A RRA LG++++++ +I Sbjct: 756 PETLPGILLSVADRLDTLSGLFAAGLAPSGTKDPFAQRRAALGLVQVLISRQIPFDLRQG 815 Query: 522 ------DIPLSQFIEDQNLIL-FFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDL 573 +P++ E QN L F + RL+ +L D R+D+++A++ + N Sbjct: 816 LALAAQGLPITASEESQNACLEFIYGRLRTHLMDDYGFRYDVVDAVMAEQAHNPFGAYRA 875 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + A L + R +I ++++ + P+ + E+ LYA + Sbjct: 876 AQALTAWVQRADWNTILPAYARCVRI-----TRDQKEQFAVQPERFVEVEEQALYAAL-- 928 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEI---FFDQVLVNVDDREVRDNRLSLLQYIKN 690 +Q ++ + D + I + FFD VLV +D VR NRL LLQ I Sbjct: 929 ----LQAEAAPRQPGSVDDFFAAFLPMIPVINRFFDTVLVMAEDAGVRANRLGLLQRIAA 984 Query: 691 IILIVINVQKI 701 + V + K+ Sbjct: 985 LTRGVADFSKL 995 >gi|184155319|ref|YP_001843659.1| glycyl-tRNA synthetase subunit beta [Lactobacillus fermentum IFO 3956] gi|238692973|sp|B2GBZ7|SYGB_LACF3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|183226663|dbj|BAG27179.1| glycyl-tRNA synthase beta subunit [Lactobacillus fermentum IFO 3956] Length = 692 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 208/738 (28%), Positives = 355/738 (48%), Gaps = 91/738 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL+ Sbjct: 5 YLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E GP G KA GF R G T+ D + K+ KG Y+ V + Sbjct: 65 PDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQG-ATVDDIEFKE--VKGVEYVYVEKHI 121 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + + +VL + V I + +P MRW + ++IRP+ ++ +L +++ Sbjct: 122 QGKPVAEVLAGLNDV-ITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL-----DDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + D+ + G +T GHRF H ++++S Y+ L++ V++D R+ I + + Sbjct: 171 VPFDILNVTAGRLTRGHRFLG-HDVEIKSATDYVAALKDDFVIVDAAERKATIKDQIQAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F R Sbjct: 230 VDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFCVRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N G A +++GN RV+ RLEDA F+ DQ Sbjct: 290 DGKLQPAFISVRN-----GNAVHLDNVIKGNERVLVPRLEDAKFFFDEDQK--------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +DQ + RL +V FH +I + ++++R + L + Q L D ++ Sbjct: 336 -----------MTIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P + Sbjct: 383 ADLARAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 443 PQTTVGTVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDF 502 Query: 529 -------IEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 +E L FF DRLK +RHD+++A+ + Sbjct: 503 QASAKQAVEQATPALGLDYAKNADAVTDFFIDRLKQLFSLDHLRHDIVDAVTDTHVTDPA 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRL 627 IV+ L+ A + + + R+ ++ A K N E +++ P +E +L Sbjct: 563 AIVEAAHVLDAHKDDADLKDQVEALTRVIRLAA---KGNLSEDDVKVDPSLFENPSEGQL 619 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSL 684 +Q +D K + ++ E I ++F++ ++ D V++NRLSL Sbjct: 620 -------DQAVQALIDAKEGRSLDQQFSALLELEPVISLYFEENMIMDKDEAVKNNRLSL 672 Query: 685 LQYIKNIILIVINVQKIV 702 L + + N+ +++ Sbjct: 673 LTILADQTAAFGNLDQLI 690 >gi|51245338|ref|YP_065222.1| glycyl-tRNA synthetase, beta subunit [Desulfotalea psychrophila LSv54] gi|50876375|emb|CAG36215.1| probable glycyl-tRNA synthetase, beta subunit [Desulfotalea psychrophila LSv54] Length = 689 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 211/729 (28%), Positives = 347/729 (47%), Gaps = 70/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EE+PA Q + + L I E + + + +P RL + +K L+ Sbjct: 1 MRDLLFEIGTEELPAGFQRPSLQQLKEKFIQKAAELKIEHGAVVTLGSPRRLTIIVKDLA 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +EE LGP A KA GF RS G ++ D Q+ + KG+ YL ++ Sbjct: 61 LKQDDILEELLGPSKKAAFDGDGNPTKAAQGFARSKG-ASVEDLQVV-ETAKGE-YLMLV 117 Query: 114 RKPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R+ K + +L ++ I ++ + KSMRW + + ++ RP++ +L + Sbjct: 118 RELKGQETVALLPKLLEELIGELSFAKSMRWGSYTT-----TFARPIQWLLALF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E ++ L +I + + GHRF A V+ Y L E V++DP RR ++ + Sbjct: 168 EDVVALKHGDIVSAHTSRGHRFMANVDFVVKDAASYEELLLEHNVIVDPAKRRAKVVEEI 227 Query: 233 HR-LASAVGLE--LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 HR LA + +E L D++L++ + LVE+ G F K +L LP+E++ +++ NQK Sbjct: 228 HRALAESTLVEGTLAVDEELVDTVTNLVEYPYGVCGVFAKSFLDLPDEVLTTSMRVNQKY 287 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L N F+ V+N + D +G+ RV+ ARL+DA+ F+ D+ Sbjct: 288 FTIVDDAGALVNGFVAVNNTKVIDS-EVTRKGHQRVLRARLDDAIFFFAGDKKT------ 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-V 408 L+ R+A L +VF K+GT E+ RI L + +A++ID V Sbjct: 341 --------------SLESRVASL--AGIVFQTKLGTMAEKTERIVKLTRSLAEVIDHSLV 384 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA L KADL T++V EF LQG +G YA E AI+EH P+ + Sbjct: 385 ADACRAATLCKADLITDMVGEFTSLQGVMGAAYATNDGEKEGVALAIKEHYMPKRAGAEL 444 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + V LAD+LDT+ + I + P+G+ DP+ LRR TL ++ II E I L + Sbjct: 445 PDTDLGALVGLADRLDTIAGCFGIGQIPTGTADPFGLRRLTLAVLHIISERGYTISLHEM 504 Query: 529 IED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + + +I F RL R +EA+L D+L I Sbjct: 505 VGKALALYGDKVNGGNETVEKIIDFMRGRLANDCVSRGQNAGAVEAVLSLGFDDLGDIHA 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 I+ L E S KRI I+ K N ++E+ +AE+ L+++ Sbjct: 565 RIQALMEVRKEDSFAVLAASFKRIRNII----KNN--TAVEVQTDLFEEDAERNLFSLFQ 618 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 +Q+ + K Y ++ + EP++ FF+ V+V ++ VR NRL+LL + +++ Sbjct: 619 LVAAEMQDLVAKKEYLAALMVMLKMKEPVDAFFESVMVMAENDAVRQNRLNLLTALADLV 678 Query: 693 LIVINVQKI 701 + + ++ K+ Sbjct: 679 MQIGDISKM 687 >gi|307728479|ref|YP_003905703.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. CCGE1003] gi|307583014|gb|ADN56412.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1003] Length = 700 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 206/686 (30%), Positives = 340/686 (49%), Gaps = 60/686 (8%) Query: 42 NMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ-- 92 + +Y TP RL + +K + +PE+ + E++ P + G + L + G Sbjct: 49 SFERYATPRRLAVTVKNVRAVAPERHVREKVLPVSVALDKDGQPTAPLAKKLAALGFPDF 108 Query: 93 TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 ++SD + +D K + + P + + L+ + + K+P PK M + S Sbjct: 109 SVSDLERAQD-GKAEAFFLRYAAPGATLAEGLQAALDETLTKLPIPKVMTYQRPDG--SN 165 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 ++RP + + E+++ + I + T GHRF + +++Q D Y+ L Sbjct: 166 VQFVRPAHRLTAL-----HGERVVPVSALGIDADDTTLGHRFLSEGFVQIQHADAYVDTL 220 Query: 213 -EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKY 271 + V+ + R+ I H LA A G ++V + LL+E+ LVEW + F+ ++ Sbjct: 221 MHKGRVVPNFADRKETIRT--HLLAHADGDQVVMPESLLDEVTSLVEWPVAYSCRFEDEF 278 Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 L +P+E + LT++TNQK F G L + F++VSNI+ + G I++GN RVV RL Sbjct: 279 LQVPQECLILTMQTNQKYFALTDANGKLRSRFLIVSNIETATPGD-IIEGNERVVRPRLA 337 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F+++D+ KPL +R+ L +VV+H K+G+ +RV Sbjct: 338 DAKFFFEQDKK--------------------KPLAERVPLL--ANVVYHNKLGSALQRVE 375 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R+ L IA LI ADVAL RA L+KADL T++V EFPELQG +G YA E Sbjct: 376 RLEGLAGAIAALIGADVALAKRAARLAKADLITDMVGEFPELQGTMGTYYARHDGEPEEV 435 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A EH +PR + +P V+LADKL+TL+ W I +P+G KDP+ALRR LG Sbjct: 436 ALACSEHYQPRFSGDALPATATGTVVALADKLETLVGIWGIGLQPTGEKDPFALRRHALG 495 Query: 512 IIRIILENKIDIPL--------SQFI-------EDQNLILFFHDRLKLYLHDRDIRHDLI 556 ++RI++E ++ + +QF Q + F DRL+ L +R I Sbjct: 496 VLRILVEKQLAVDFVELLRTAHAQFAALPNVTDSTQAIYEFSMDRLRGLLRERGHAPGEI 555 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L E L IV + + EF + + + KRI IL ++ + +S + P Sbjct: 556 DAVLALEPTRLDDIVARLVAVREFAALPEAGSLAAANKRISNIL--KKSDSATVSGGVQP 613 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + AEK L+A + +Q + + Y L ++ EP++ FF+ V+VN +D Sbjct: 614 ALFVEAAEKALHAQLEQVAPRVQSQLAARDYTGALTALAALREPVDTFFNDVMVNAEDPA 673 Query: 677 VRDNRLSLLQYIKNIILIVINVQKIV 702 +R NRL+LL + + V ++ ++ Sbjct: 674 LRANRLALLGALHQQLNCVADISRLA 699 >gi|253987711|ref|YP_003039067.1| glycyl-tRNA synthetase subunit beta [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779161|emb|CAQ82321.1| glycyl-trna synthetase beta chain (glycine--trna ligase beta chain (glyrs) [Photorhabdus asymbiotica] Length = 689 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 203/723 (28%), Positives = 334/723 (46%), Gaps = 71/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + TP RL L + L Sbjct: 6 FLVEIGTEELPPKALRSLAEAFAANFAAELDNANLAHGEVSWFATPRRLALKVANLDEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A+++ Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITAAQAERLVTDKGEWLLYRALVKGL 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 ++++L +V A+ K+P PK MRWS + ++RP+ ++ + E +I Sbjct: 126 S--VKELLAGMVNNALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLFGNE-----LI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRL 235 + D+ I + GHRF + + + Y L++ V+ D R+ I D + Sbjct: 174 EGDILGIKSTRVIRGHRFMGESEFTIDNTEQYPEILQQRGKVMADYVTRKALIKQDVEQA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AVKLGGIADISDSLLEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYDH 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 G L FI V+NI++SD I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 AGKLMANFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 352 --------------------------VLFQKQLGTLRDKTDRIQALAGWIAEKIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 IS +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E K+ + L E Sbjct: 446 TGISCALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKKLPLDLQTLTE 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + ++ D I+A+L +K Sbjct: 506 EAVRLYGDKLTNAKVIDDVVEFMLGRFRAWYQEQGYSIDTIQAVLARRPTQPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ ILA E+ E ++S L E +L + Sbjct: 566 AVTHFRTLDEATALAAANKRVSNILAKSEETLNE---KVSASVLKAPEEVKLATHLVVLQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + Y + L S+ E ++ FFD V+V +D++VR NRL+LL ++ + L V Sbjct: 623 DKLAPLFAEGCYQEALVELASLREVVDAFFDNVMVMDEDQQVRVNRLTLLSELRELFLKV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|81298829|ref|YP_399037.1| glycyl-tRNA synthetase subunit beta [Synechococcus elongatus PCC 7942] gi|81167710|gb|ABB56050.1| glycyl-tRNA synthetase, beta subunit [Synechococcus elongatus PCC 7942] Length = 728 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 193/661 (29%), Positives = 319/661 (48%), Gaps = 93/661 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A L L E + + Y TP RL + ++GL Sbjct: 1 MPAFLLEVGTEELPASFVAAAIAQWQNWLPTRLAEAQLTTTQISVYGTPRRLAVLIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A K A GF R G++ +SD +++ K V++ R Sbjct: 61 DRQPDREEEVKGPPASAAFKDGEPTPAAIGFARKQGVE-VSDFTVRETDKGAFVFVQK-R 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + + DVL+++VP IQ + + MRW + RP++ ++ ++ ++ Sbjct: 119 EVGQPLADVLQSLVPSWIQDLEGKRFMRWGDGD-----LRFSRPIRWLVALI-----DDQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L + ++ GHR P P+ + Y+ LE A VL+DP R+ I Sbjct: 169 VLPLELTSGGSTVQSDRLSRGHRVLHPEPVAIAQASDYLATLEAASVLVDPAQRQAKIEA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +AS VG + +DLL E++ L EW +G F++++L LP E+ + + ++Q+ F Sbjct: 229 QTAAIASKVGGQAELPEDLLAEVVHLTEWPTAVLGQFEERFLSLPAEVSTMVMTSHQRYF 288 Query: 291 ----VTRTREGV-------LANCFILVSNIQASDGGAA--IVQGNSRVVAARLEDALHFW 337 T R+ L CF+ +SN D A+ I GN+RV+ ARL D +F+ Sbjct: 289 PIYQATAQRDPAAIDARSELLPCFVTISN---GDPAASETIAAGNARVIRARLADGEYFY 345 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 + D +PL+ +++L+ V F ++G+ +V RI + Sbjct: 346 RTDSK--------------------QPLESFLSQLEA--VTFQEQLGSVRSKVDRIGAIA 383 Query: 398 KKIAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 ++ + +D LV RA L KADL +++V EFPELQG +G++YA + E + A Sbjct: 384 HRLCDQLSIHSSDRLLVSRAAQLCKADLVSQMVYEFPELQGVMGEKYARVSQEPDAVATA 443 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 I EH P+G + +P V+LAD+LDTL+ + + PSGS DP+ALRRA G++ Sbjct: 444 IREHYLPKGAGDQLPQTLTGRMVALADRLDTLVCIFGLGLLPSGSSDPFALRRAANGVLN 503 Query: 515 IILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHD-RDIRH 553 I+ + ++ + L+ I+ Q L FF RL+ L D + I + Sbjct: 504 ILWDGQLRLDLTALIQGIAADFHHAFPKLAGNAETLIQQLTDFFGQRLRTLLQDEQGIDY 563 Query: 554 DLIEAILRPENDNLL--TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 DL+ A+L + N L I D + LN K L + ++ +++A+ E NR Sbjct: 564 DLVNAVLGDGDANYLLRAIADPLDALNR-------AKLLQTLRQDGRLVALYETVNRATR 616 Query: 612 L 612 L Sbjct: 617 L 617 >gi|322391802|ref|ZP_08065267.1| glycyl-tRNA synthetase beta subunit [Streptococcus peroris ATCC 700780] gi|321145282|gb|EFX40678.1| glycyl-tRNA synthetase beta subunit [Streptococcus peroris ATCC 700780] Length = 678 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 216/706 (30%), Positives = 345/706 (48%), Gaps = 85/706 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y+ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDENRLSYEGIQTFSTPRRLAIRVLGLAEQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR----KPKRLIED 122 G KA GF+R GL T+ D + ++ KG+ Y+ V + KP + + Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGL-TVDDIEFRE--IKGEEYVYVTKHEAGKPAK---E 128 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL T +P + + +P SM W+ + F +IRP+ +++ +L E + Sbjct: 129 VL-TGIPEVLASLSFPVSMHWAN-----NTFEYIRPVHTLIVLLDDEALDLDF-----LD 177 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 I G ++ GHRF H ++++ D Y DL + V+ D R N I + G++ Sbjct: 178 IHSGRVSRGHRFLG-HEVEIRHADSYEEDLRKVYVIADSIERENMIREQIKAIEVEQGVQ 236 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D+ LL E++ LVE+ F+G+FD KYL +PEE++ +++T+Q+ FV R EG L Sbjct: 237 VQVDEGLLNEVLNLVEYPTAFIGNFDPKYLEVPEEVLVTSMETHQRYFVVRDLEGNLKPN 296 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 FI V N A + +++GN +V+ ARLED FW+ DQ LK DL Sbjct: 297 FISVRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQK------------LKIE-DLV 342 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGE---RVSRIRVL-GKKIAQLIDADVALVDRAIVLS 418 L V FH KIG+ E R +I +L +K +D V L RA + Sbjct: 343 AKLSH---------VTFHEKIGSLREHMIRSGQIAILLAEKAGLSVDETVDLA-RAAAIY 392 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF ELQG +G++YA+L EN AI EH P +P +K+ ++ Sbjct: 393 KFDLLTGMVGEFDELQGVMGEKYALLAGENARVAQAIREHYLPDSADGALPESKVGAILA 452 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ + IP+ + I Sbjct: 453 LADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEDFGWKIPMDELIASLYALSFD 512 Query: 530 ----EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 ++Q +L F R+ + D+ EA+L N + D+I+ +A Sbjct: 513 SLTYDNQEEVLNFIKARVDKMMG--STAKDIKEAVLASSN---FVVSDMIEAAEALTEAA 567 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 K E + S + + + + EK E S+++ E EK L + ++ S Sbjct: 568 KTEDYKSSVESLSRAFNLAEKA--EGSVKVDASLFENEQEKELAQEVESL--ELKGSASD 623 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 K L ++ I+ FFD +V +D +V++NRL++L + N Sbjct: 624 KVAQ-----LFALSPVIDAFFDNTMVMAEDVDVKNNRLAILVELVN 664 >gi|238765095|ref|ZP_04626030.1| Glycyl-tRNA synthetase beta subunit [Yersinia kristensenii ATCC 33638] gi|238696712|gb|EEP89494.1| Glycyl-tRNA synthetase beta subunit [Yersinia kristensenii ATCC 33638] Length = 689 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 203/718 (28%), Positives = 328/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDSANLPHGEVIWYAAPRRLALKVINLSASQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLITDKGEWLLYRAHVKGQ 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E ++ Sbjct: 126 SAQL--LLAGMVSTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSEVIPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D I GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 179 GID-----SDRIIRGHRFMGESEFALDNADQYPQVLLERGKVIADYELRKAIIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDT 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + D D I+A+L +K + F Sbjct: 511 YGSKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E ++ FFD V+V ++ VR NRL+LL ++ + L V ++ Sbjct: 628 VFAAGQYQEALVELAALRETVDEFFDSVMVMDENDAVRVNRLTLLSKLRELFLQVADI 685 >gi|89100474|ref|ZP_01173336.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. NRRL B-14911] gi|89084817|gb|EAR63956.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. NRRL B-14911] Length = 690 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 215/735 (29%), Positives = 365/735 (49%), Gaps = 86/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR + L+ + L+E+ V + + + TP RL + +K +S Sbjct: 5 DLLLEIGLEEMPARFVTDSINQLASKVEKWLEEKKVPHGGISAFSTPRRLAVLVKDVSET 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF R G+ + D K+ G Y V Sbjct: 65 QEDIHEEAKGPARKIAQNEAGEWSKAAIGFSRGQGMD-VDDIYFKE--INGIEYAHV--- 118 Query: 116 PKRLIEDV-LKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + I+ +I+P + + +PK+MRW+ ++RP+K I+ + Sbjct: 119 -NKFIKGAETASILPELKDITESLTFPKNMRWADRD-----MRYVRPIKWIMALF----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +I ++ +P N T GHRF +++ Y + L VL++ E R++ I + Sbjct: 168 GQDVIPFEIAGVPASNWTLGHRFLG-EKVELTEPAEYEKSLLGQFVLVNAEERKSGIRSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 RLA + D+DLLEE+ LVE+ G F++++L +PEE++ ++K +Q+ F Sbjct: 227 IERLAEENNWVIPVDEDLLEEVTNLVEYPTALFGKFEEEFLEIPEEVLITSMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++ EG L F+ V N + + +GN +V+ ARL DA F++ DQ Sbjct: 287 VKSAEGKLLPYFVTVRNGD-HNHLEQVAKGNEKVLRARLADAAFFYQEDQK--------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 +D+ L + + +V+H +IGT E+V R+R L ++A+ + + Sbjct: 337 -------MDIESALQK------LGSIVYHEEIGTLAEKVERVRKLANELAESLSLNPEEK 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 VDRA +SK DL +++V EFPELQG +G++YA + E+ + AI EH PR ++ Sbjct: 384 KTVDRAAEISKFDLVSQMVYEFPELQGFMGEKYAAQKGEDAAVAKAINEHYMPRNAEDSA 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++A+KLDT+ +F+AI PSGS+DPYALRR GI++I+ + L + Sbjct: 444 PESNEGAVLAVAEKLDTISSFFAIGMIPSGSQDPYALRRQAAGIVQILAVKGWKLELEEV 503 Query: 529 I----------------EDQ---NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I E+Q L+ FF R+K L +R IR+D+I+A+L + + + Sbjct: 504 IKKSLALVKESGVGKKEEEQVYDELLSFFKLRIKHTLQERSIRYDIIDAVL---SGKIGS 560 Query: 570 IVDLIKHLNEFFSSAKGE-KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK-RL 627 + LIK E ++ KGE F S + + ++L I K +++ Q L E+ L Sbjct: 561 MASLIKRA-EVLNAHKGEDGFKESMEALSRVLNIASKAEHPAAVD---QGLFENKEETEL 616 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y+ + I ++ + Y+ LL S+ I +F+ +V D+ +++NRLS++ Sbjct: 617 YSRFLEVSAKIGNGVEEEEYYM---LLVSMRPEIGAYFENTMVMADNTALKENRLSMMAE 673 Query: 688 IKNIILIVINVQKIV 702 I ++I V +IV Sbjct: 674 IASLIQAFAKVNEIV 688 >gi|145301092|ref|YP_001143933.1| glycyl-tRNA synthetase subunit beta [Aeromonas salmonicida subsp. salmonicida A449] gi|166227910|sp|A4STG3|SYGB_AERS4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|142853864|gb|ABO92185.1| glycine-tRNA synthetase, beta subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 689 Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 204/698 (29%), Positives = 322/698 (46%), Gaps = 61/698 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI + E+P + AE + L + + + ++ + +P RL L + L+ Sbjct: 6 FLVEIGTAELPPKALRSLAEAFADNFKAELTKADLAFGDIEWFASPRRLALKVHALASEQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 66 PSKSVEKRGPAVSQAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHTAKVE 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +D+L +V A+ K+P PK MRW ++RP+ ++ +L E I+ Sbjct: 124 GRPAKDLLGELVASALAKLPIPKMMRWGD-----KTIQFVRPVFTVTLLLDGELVPAHIL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D GHRF + + Y + L E+ V+ D R+ I DA Sbjct: 179 GID-----SARTIRGHRFMGEPEFTIDNASQYPQILLEKGKVVADFMARKAKIKADAEAA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+A G D LLEE+ LVEW V +F++K+L +P E + T+K +QK F + Sbjct: 234 AAAFGGVADLDDALLEEVTALVEWPVVLTANFEEKFLAVPAEALVHTMKGDQKYFPVYDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D + I+ GN +VV RL DA F Sbjct: 294 NGKLLPKFIFVTNIESKDP-SQIISGNEKVVRPRLSDAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 F DL + L R+ RL+ V+F ++GT +V RI + IA+ I A+VA RA Sbjct: 334 -FKTDLKQTLASRLPRLET--VLFQQQLGTVKAKVERIETVAGFIAERIGANVAQAKRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF QG +G YA E+ A+ E PR + +P+ + Sbjct: 391 LLSKCDLMTNMVGEFASTQGVMGMHYARHDGEDEVVAVALNEQYMPRFAGDALPSALEAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+LADKLDTL + I P G KDP+ALRRA +G +RI+ E ++D+ L + +E+ Sbjct: 451 AVALADKLDTLAGIFGIGMLPKGDKDPFALRRAAIGALRIMTEKQLDLDLVELVEEAVRV 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +++ F R + D I D++ A+L L +K ++ F Sbjct: 511 YGDKLTNKTVVTDVVDFMLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVSHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ ILA K E+ + P+ L AEK L +++ + Sbjct: 571 RSLDAALALAAANKRVSNILA---KVEGELPTAVKPELLQDAAEKALATQVAELQAELAP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 Y L ++ EP++ FF++V+V DD ++ Sbjct: 628 LFAAGDYQAALTRLAALREPVDTFFNEVMVMADDEALK 665 >gi|139439748|ref|ZP_01773139.1| Hypothetical protein COLAER_02170 [Collinsella aerofaciens ATCC 25986] gi|133774898|gb|EBA38718.1| Hypothetical protein COLAER_02170 [Collinsella aerofaciens ATCC 25986] Length = 698 Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 218/734 (29%), Positives = 338/734 (46%), Gaps = 78/734 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI +EE+P+ + A + L ++ L E G+ + +R +P RL + ++ Sbjct: 6 DFLFEIGTEEMPSAPLNNAVKQLGTMIAKGLDEAGLAHGEVRVISSPRRLAALVANVATA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E E + GP G KA GF R G+ D ++D + A Sbjct: 66 TDEVHEVKRGPAANIAFDADGNATKAAQGFARKCGVAA-EDLVRREDTDGREYVFAEKNI 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P +L ++ I + WP +S RW H+ +++RP++ I C+L E Sbjct: 125 PSAPATPILTSLCEKTIAGLQWPNYRSQRWGHEHA-----TFVRPVRWICCLL-----GE 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND-A 232 ++ + ++ GN T GHR P V S Y + LE+A VL E RR AIL A Sbjct: 175 DVVPVSFADVTSGNTTRGHRVLGPGDHVVASPAVYEQVLEDAGVL-SAERRREAILAGIA 233 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+ G + K + EE+I L EW V +G+FD+++L +P E+I ++ TNQ+ F Sbjct: 234 EVEAARPGCHVDTPKKVFEEVINLCEWPTVLVGTFDEEFLKVPHEIICESMLTNQRYFPI 293 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L F++VSN + + ++ GN RVV ARL+DA F++ D Sbjct: 294 YDGEGKLTREFVVVSNSK-PENAERVIDGNERVVRARLDDAKFFYEED------------ 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGT---QGERVSRIRVLGKKIAQLIDADVA 409 LK +LD +R+A+ V F K+G+ + ER+ ++ + + A L A Sbjct: 341 --LKISLD---EFRERLAK-----VAFQEKLGSVLAKSERIEQLALAIAREAHLGAHLAA 390 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L KADL + V EF QG +G YA+ EN AI +H +PR + +P Sbjct: 391 DAARAAHLCKADLVSNAVVEFTSQQGVMGGYYAIAMGENDGVAHAIRDHYRPRFAGDELP 450 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE-------NKID 522 V+ ADKLDT+ +AI E P+GS DPYALRRA +GII I+ + + ID Sbjct: 451 EGTAGCIVACADKLDTIAGIFAIGEPPTGSSDPYALRRAAIGIINILRDRLPIDPTSLID 510 Query: 523 IPLSQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L + E Q + FFH RL D + D + A+ + V Sbjct: 511 FALELYSEQGIEFDAAEVAQQVRDFFHGRLVSMARDEKVPADTVAAV---------SAVH 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL-EISPQY---LLLEAEKRLY 628 +I F A ++ + F LA + IS E+ +Y L+ E E L Sbjct: 562 IIAPSVFFARCAALDEARKNDAETFDNLATAYARAAHISKPELGVEYDRSLMGEVELELA 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 T + ++ + Y L ++ PI+ FFD+V+V D ++RDNRL LL Sbjct: 622 DASEAAQTAVDAALAAEDYPAAFAALAALRAPIDRFFDEVMVMDKDEQLRDNRLKLLNRF 681 Query: 689 KNIILIVINVQKIV 702 + + + N+ ++ Sbjct: 682 EAVFSGIANIGELA 695 >gi|225850124|ref|YP_002730358.1| glycyl-tRNA synthetase, beta subunit [Persephonella marina EX-H1] gi|254781858|sp|C0QUJ3|SYGB_PERMH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225644860|gb|ACO03046.1| glycyl-tRNA synthetase, beta subunit [Persephonella marina EX-H1] Length = 705 Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 205/748 (27%), Positives = 349/748 (46%), Gaps = 90/748 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKE--EGVIYQNMRQYWTPHRLFLYLKG 58 M +LLEI EE+P + A L GL + E +N+ + TP R+ L Sbjct: 1 MKKYLLEIGCEELPPKAVDTAISYFKERLEGLFENFFEYRTEENISVFGTPRRIGFILSN 60 Query: 59 LSPHSPEKIEERLGPRVGAGKKAIDGFLRST-GLQTISDCQIKK----DPKKGDVYLAVL 113 L P + + LGP G F ++ + ++ +++ + +KG A L Sbjct: 61 LREKEPSEEKTILGPPAKVGIDEKGNFTKAALAFASKNNIPVEQLKIIENEKGRYIGATL 120 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K + I ++ ++P I K+P+PK MRW+ T F + RP++ I+ +L E Sbjct: 121 IKEGKDIRTFIQEVIPDLITKIPFPKLMRWNET-----GFRFSRPVRWIVSLLDNE---- 171 Query: 174 KIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++ + I T+ HRF K+ +D Y + ++ ++ E R+ A+ Sbjct: 172 -VVSFSIAGIDADRYTHLHRFMTTPTGRGERKKIPDVDSYFQIMKLGFIIPKYEERKEAV 230 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A+++ E V D+DLL+E+ L E+ +G F +YL LP+E+I K +Q+ Sbjct: 231 KTQLTGFANSINAEPVIDEDLLDEVTNLTEFPVGILGDFSPEYLILPKEVIITVCKVHQR 290 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F ++G L F+ SN D + G +V+ ARLEDAL F++ D Sbjct: 291 YF-NFEKDGKLIPKFLAFSNTAVKDR-EKVKSGYEKVLKARLEDALFFYEED-------- 340 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 LK NL+ P + + FH K+G+ ++V R +IA L+ ++ Sbjct: 341 ------LKHNLEDFYP--------QLEGIQFHHKLGSMLDKVKR----NGEIAVLLSREL 382 Query: 409 ALVD-----RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + RA LSK DL TE+V+EF ELQG +G YA+ Q E AI EH P+ Sbjct: 383 NFENLKDLLRANKLSKCDLLTEMVKEFDELQGIMGMHYALKQGEKEEVAKAIYEHYLPKT 442 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P I +SL+DKLDT+I+F +I EKP + DP+ +RR ++GI+RI++E ID+ Sbjct: 443 SDDQLPETDIGTLLSLSDKLDTVISFISIGEKPKATADPFGIRRNSIGIVRILVEKGIDL 502 Query: 524 PLSQFIED-----------------------------QNLILFFHDRLKLYLHDRDIRHD 554 L + ++D ++ F R Y+ D+ D Sbjct: 503 DLKKLLQDISREARKVKILRLADIEKEWEIIFDERTIPEILDFIEGRFIAYMKDKGFDTD 562 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 +I +++ ++ NL IK + E + + + KR+ +I+ E Sbjct: 563 IINSVVSVDSYNLYRNYLKIKSIQELKKNPEFTDIMTVFKRVGRIIP------EEFEEHF 616 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 +P L+ + EK LY ++ + ++ +RY + + L + I+ FFD V+V +D Sbjct: 617 NPDTLVQDEEKELYRKYTEVNKIFSKDVEDRRYTEALNELLKMKPFIDKFFDNVMVMTED 676 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKIV 702 +++R+NRLSL++ I N+ + + KI Sbjct: 677 KKLRENRLSLMKLINNMFRKIADFTKIT 704 >gi|294101759|ref|YP_003553617.1| glycyl-tRNA synthetase, beta subunit [Aminobacterium colombiense DSM 12261] gi|293616739|gb|ADE56893.1| glycyl-tRNA synthetase, beta subunit [Aminobacterium colombiense DSM 12261] Length = 687 Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 203/717 (28%), Positives = 354/717 (49%), Gaps = 72/717 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EEIP+R A E + + + + + Y TP R+ L ++ + + Sbjct: 5 NLLLEIGTEEIPSRFLPDALETIVSYAEKEFETARIKHGRIGAYGTPRRIALTIRDVQEN 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI GP G KA GF +S G+ + D + AV+ + Sbjct: 65 QEDKIMTYKGPTWESAFDANGNPTKAAIGFAKSKGVNYEELTHKEVDGVR--YAFAVISE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++L I+ + ++ +PK+M W P F+ RP++ I+ +L E I Sbjct: 123 QGNPVQNLLPQILTNIMGQIVFPKNMYW---LDPTIKFA--RPIRWIVALLDKE-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + I G T GHRF I V ++ L + V+LD E R+ +++ L Sbjct: 173 VPFTYGGIESGRTTRGHRFMGSRSIDVADASEFMEKLYDNYVILDQEKRKQKMISGITAL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +G ++ D +L++E + LVE+ F GSFDKK+L +PEE++ +++K +QK F R+ Sbjct: 233 EKEIGGKVELDPELVDENLYLVEFPIPFYGSFDKKFLDIPEEVLTISMKKHQKYFPVRSE 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ VSN +A++ G + +GN RV+ ARLEDA FW D Sbjct: 293 NGKLMPFFVGVSNNRATNMGV-VREGNERVLRARLEDAAFFWAED--------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDR 413 L KPL + L +V+ K+G+ +++ + L K + + + + LVDR Sbjct: 337 -----LKKPLAGCIEGLK--SIVYQEKLGSLYDKIKATQKLAKYLCEKLGFLDEAKLVDR 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EFPELQG +G+EYA+ E AI E P+ + VP++ I Sbjct: 390 AALLSKCDLLTNMVYEFPELQGIMGREYALRNGEPERVAKAIYEQYLPKSAGDTVPSDII 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +A+++ ++N + +P+GS+DPYALRRA I II +D+ ++ I Sbjct: 450 GAILGIAERIFVIVNCHKVGLQPTGSQDPYALRRAARCINEIIWGVDLDVDIADLISQAG 509 Query: 532 QNLIL----------FFHDRLKLYLHDRDIRHDLIEAIL-----RP-ENDNLLTIVDLIK 575 QN + FF RL + L ++ HDL+ + +P + + L +V+ +K Sbjct: 510 QNFEVPEKILEQSRSFFEQRLHVQLKEKGYEHDLVTLAISVVGRKPFQALHFLNVVNKVK 569 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + E+F + +A R+ IL+ E+ +++I+ E+ + E L+ +++ Sbjct: 570 N-EEWFVD-----LVTAAVRVRNILSKAEEYSKDIAQELFQK----NVENELFIEMNEMT 619 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++++++ + ++ LL + I FFD V++ +D ++R NRL+LL +I Sbjct: 620 PLVEDALERYDWDELMVLLSRLSPRITAFFDDVMIMDNDLDIRQNRLALLSRCNSIF 676 >gi|312866358|ref|ZP_07726576.1| glycine--tRNA ligase, beta subunit [Streptococcus downei F0415] gi|311098052|gb|EFQ56278.1| glycine--tRNA ligase, beta subunit [Streptococcus downei F0415] Length = 679 Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 195/704 (27%), Positives = 345/704 (49%), Gaps = 90/704 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK+ + + +++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMAAFLKDNRLSFDSIKTFSTPRRLAVRVMGLADKQEDLSEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T D + ++ KG+ Y+ V ++ + + Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGL-TTDDIEFRQ--VKGEEYVYVTKQEAGQPAEAVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 VP + + +P SM W++ ++F +IRP+ ++ +L ++ +++D +I G Sbjct: 132 GVPEVLNSLTFPVSMHWAS-----NSFEYIRPVHTLTVLL-----DDQALNMDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF ++ + D Y DL + V+ D + R+ I+ + + + + D Sbjct: 182 RVSRGHRFLG-QETQICTGDSYEDDLRKEFVIADSQERQGMIVEQIKAVEAEQNVSVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMG FD+KYL +PEE++ ++K +Q+ FV R + G L F+ V Sbjct: 241 PDLLNEVLNLVEYPTAFMGHFDEKYLEVPEEVLVTSMKNHQRYFVVRDQSGQLLPNFVSV 300 Query: 307 SNIQASDGGA----AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 N G +++GN +V+ ARLED FW DQ LK + L Sbjct: 301 RN-----GNEHYLENVIKGNEKVLVARLEDGEFFWHEDQK-------LKIADL------- 341 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSK 419 +A+L V FH KIG+ E ++R ++ +A+ L + +DRA + K Sbjct: 342 ------VAKLSH--VTFHEKIGSLSEHMARTSLIADYLAKTVGLTADETKDLDRAAAIYK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF ELQG +G++YA+L E AI EH P +P K+ ++L Sbjct: 394 FDLLTGMVGEFDELQGIMGEKYALLDGEEAPVATAIREHYLPDSADGVLPQTKVGAVLAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ +P+ Q ++ NL Sbjct: 454 ADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDSFGWAVPMDQLVD--NLYDLSF 511 Query: 540 DRLKLYLHDRD----------------IRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 D L Y H ++ + D+ EA+L + + ++ ++ Sbjct: 512 DSLT-YAHKQEVMDFIAARVDKMMGSGVSKDIREAVLA---GSTFVVPQMLAAAQALQAA 567 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHIQES 641 ++ + + + + + ++ + EK +++ ++P + EK L ++D ++E+ Sbjct: 568 SQADNYKPAVESLSRVFNLAEKAPADVA--VNPSLFENDQEKALAQSLADLQLSDDVKEN 625 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + ++ I+ FFD +V DD +++NRL+LL Sbjct: 626 LTQ---------FFALSPVIDAFFDNTMVMSDDETLKNNRLALL 660 >gi|313896142|ref|ZP_07829696.1| glycine--tRNA ligase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312975567|gb|EFR41028.1| glycine--tRNA ligase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 687 Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 210/735 (28%), Positives = 330/735 (44%), Gaps = 88/735 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA ++ + + E + Y +R TP R+ L + G + Sbjct: 4 DLLLEIGTEEIPAHAMPNLLREMKRLAGEMFTEHRISYDEIRTLGTPRRMALIVTGAAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP + G KA GF R G + I++D G VY AV Sbjct: 64 QADVSTETRGPAISIAFDADGNPTKAGAGFAR--GQHVAPEALIRRD---GYVYAAVHET 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 E +LK ++P I+ +P P SMRW F +IRP++ I+ + + + Sbjct: 119 GAPTAE-ILKELLPALIRAIPLPNSMRWGDLD-----FRFIRPIRWIVALYGTD-----V 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L E+ GN + GHR AP + S Y E A +++DP RR I Sbjct: 168 VPFTLAEVTSGNRSRGHRTLAPEDFTITSAADYETACEAAYIIVDPVRRRAMISEQIADA 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGA----AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N GG + GN RV+ ARL DA F+ D+ SL Sbjct: 288 DGSLLPVFITVRN-----GGREHLDVVAHGNERVLRARLADAQFFFDEDRKK-----SLA 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---- 407 E K + VVF +G+ E+ R+ L + + + A Sbjct: 338 EHREKLHT-----------------VVFQQGLGSMYEKTERLARLAAAVVEDMTAGDDAA 380 Query: 408 ----VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 A RA LSKADL T +V EF ELQG +G+EYA+L E AI+E PR Sbjct: 381 YETMAADARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGEKPEVARAIDEQYMPRF 440 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P + + +S+ADK+D ++ ++ + P+GS+DP+ LRR LG + +++ ++ I Sbjct: 441 AGDALPKSDLGFALSVADKIDNIVGTFSRGKIPTGSQDPFGLRRQALGFVNMLILHESGI 500 Query: 524 PLSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 LS +++ ++ F RLK L +R +R+D+ EA+L + D + Sbjct: 501 LLSDLVDEACDLYDLDDAARSKMQADVAEFIRLRLKNVLTERGVRYDVQEAVL-SDVDAV 559 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + ++ + + S R+ I + +L + + L A Sbjct: 560 ADVPGRAAYVERLLEESDAAALVQSFVRVGNIARSAPTGAVDPALFAADEERALLAAYEA 619 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 A + G E++ +R + I+ FFD V+V D V+ NRLSLL+ Sbjct: 620 AAELRAAGGDTAETIAAERRLAVA---------IDAFFDAVMVMDKDARVKTNRLSLLKS 670 Query: 688 IKNIILIVINVQKIV 702 I + +L + + +KIV Sbjct: 671 IDDGLLEIADFRKIV 685 >gi|78067498|ref|YP_370267.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. 383] gi|77968243|gb|ABB09623.1| glycyl-tRNA synthetase beta chain [Burkholderia sp. 383] Length = 699 Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 215/713 (30%), Positives = 347/713 (48%), Gaps = 63/713 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +PEK + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPEKQVREKVLP 81 Query: 74 RVGA----GKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 A GK + L +I+D + +D K + + + D L+ Sbjct: 82 VSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQD-GKAEAFFINYSAAGATLADGLQ 140 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + + K+P PK M + S ++RP+ + + ++I+ + I Sbjct: 141 AALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRIVPVTAFGIDA 193 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 G+ T GHRF + + +Q Y L ++ V+ RR I + A+ G +V Sbjct: 194 GDTTLGHRFLSDGLVAIQHARAYADTLRDKGHVIAHFVDRRETIRTQLNEHAN--GDTVV 251 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F+ Sbjct: 252 MPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSRFL 311 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 +VSNI+ G I++GN RVV RL DA F+++D+ KP Sbjct: 312 IVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK--------------------KP 350 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L R+ +L +VV+H K+G+ RV R+ L +IA +I AD L RA L+KADL T Sbjct: 351 LADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPVIGADATLAKRAARLAKADLLT 408 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E A EH +PR + +PT +S V+LADKL+ Sbjct: 409 DMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADKLE 468 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------------E 530 T++ W I P+G KDP+ALRR LG++R++LE ++ + L + E Sbjct: 469 TIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLKSLLRTAHARFEGVPGVAE 528 Query: 531 DQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + IL FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 529 STDAILAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRVDDLVARLDAVREFTRLAEAEAL 588 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KRI IL +K S + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 589 AAANKRISNIL---KKSEGGASGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAYTG 645 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 646 ALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|332163498|ref|YP_004300075.1| glycyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607999|emb|CBY29497.1| glycyl-tRNA synthetase beta chain [Yersinia enterocolitica subsp. palearctica Y11] gi|325667728|gb|ADZ44372.1| glycyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861718|emb|CBX71892.1| glycyl-tRNA synthetase beta subunit [Yersinia enterocolitica W22703] Length = 689 Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 200/718 (27%), Positives = 329/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELNSANLPHGEVVWYAAPRRLAVKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTDKGEWLLYRAHVKGQ 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E ++ Sbjct: 126 SAQL--LLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSEVIPGTVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 +D + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 179 GID-----SDRVIRGHRFMGESEFALDNADQYPQVLLERGKVIADYELRKAIIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDT 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGHLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RI++E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRILVEKNLPLDLQTLTEEAVRL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F R + + D D I+A+L +K + F Sbjct: 511 YGSKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTYF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K +++ + L AE +L + ++ Sbjct: 571 RTLDAAAALAAANKRVSNILA---KSTDKLNDHVRASVLKEPAELKLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 VFAAGQYQEALVELAALRETVDEFFESVMVMDEDDAVRVNRLTLLSKLRELFLQVADI 685 >gi|310643034|ref|YP_003947792.1| glycyl-tRNA synthetase beta subunit [Paenibacillus polymyxa SC2] gi|309247984|gb|ADO57551.1| Glycyl-tRNA synthetase beta subunit [Paenibacillus polymyxa SC2] Length = 691 Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 211/736 (28%), Positives = 345/736 (46%), Gaps = 85/736 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI EE+PAR A + L + L + Y + Y TP RL + +K ++ Sbjct: 4 DLLFEIGLEEVPARFIPNAIQQLKERMTAWLDSSRIAYSAVEAYATPRRLAVLVKEVAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF RS G + Q G Y+ + Sbjct: 64 QEDINEEVKGPSRKIALDEAGNWSKAALGFARSQG---VDPEQFTFKELGGVEYIYATKS 120 Query: 116 PKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + DVL + + + +PK MRW++ F ++RP++ ++ + ++ Sbjct: 121 SIGVPTADVLSEGLLHILHAMTFPKFMRWASYD-----FKFVRPIRWLVALFGSD----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I++L++ + GN+T GHRF + V+S Y+ L + V++D E R++ I+ Sbjct: 171 IVNLEIAGVQSGNVTRGHRFLGQEAV-VESPADYVEVLRKQHVIVDIEERQSLIVKQIEA 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ + DLLEE++ LVE V G FD +L +P++++ +++ +Q+ F Sbjct: 230 LAAEKDWTIAVKDDLLEEVLYLVETPTVLFGGFDPAFLNIPKDVLITSMREHQRYFPVLD 289 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 R G L F+ V N S I +GN +V+ ARL DA F++ DQ Sbjct: 290 RTGKLLPYFVTVRN-GGSQSLEVIAKGNEKVLRARLSDAKFFYEEDQK------------ 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVA-LV 411 L+ LSK + +VFH ++GT G++V RIR + +A+ + D V Sbjct: 337 LEIKDALSK----------LESIVFHEELGTVGDKVRRIRRIADALAEKLRVSPDTQESV 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA + K DL T++V EFPELQG +G++YA E A+ EH +PR E VP+ Sbjct: 387 SRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEEVARAVFEHYQPRFAGETVPST 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 VS+ADK+DT+ ++I P+GS+DPYALRR GI++I+L+ K+ LS Sbjct: 447 NAGAIVSIADKIDTITGCFSIGIIPTGSQDPYALRRQAAGIVQILLDRKLSATLSDVF-- 504 Query: 532 QNLILFFH----------DRLKLYLHD-----------RDIRHDLIEAILRPENDNLLTI 570 N+ L H D ++ LH+ +R+D+++A+L D++ ++ Sbjct: 505 -NIALDVHSNFGNMKRSADEIRKELHEFFGLRVKKLLSETLRYDVVDAVLSAGYDDVASV 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL--- 627 V+ L + G+ F + + ++ + K + ++ + EK L Sbjct: 564 VNRGAAL--MTAVLTGDVFKATVESFNRVGNLAAKA---VHKSVNTGEFTEQGEKNLYEA 618 Query: 628 -YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 Y + T +QE Q L SI + FFD V+V +D VR+NRL+LL Sbjct: 619 WYGAYESYCTALQEG----DATQALALASSITPAVTAFFDSVMVMAEDDAVRNNRLALLA 674 Query: 687 YIKNIILIVINVQKIV 702 I + + + K+V Sbjct: 675 AIDSELKRFADFSKLV 690 >gi|188996975|ref|YP_001931226.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|229558585|sp|B2V9P9|SYGB_SULSY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|188932042|gb|ACD66672.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 678 Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 207/720 (28%), Positives = 358/720 (49%), Gaps = 62/720 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY---QNMRQYWTPHRLFLYLK 57 M +LLEI EE+P + E L K+ IY +N++ Y TP RL + +K Sbjct: 1 MKSYLLEIGCEELPPKAILTYKEFLKEYAHQTFKD-FFIYNSPENIKIYATPRRLAVLIK 59 Query: 58 GLSPHSPEKIEERLGPRVGAGKKAID--GFLRSTGLQTISDCQI------KKDPKKGDVY 109 L + +GP K A+D G L I K +KG+ Sbjct: 60 NLKKKQDNQKITLIGP---PYKVAVDSEGKFTKAALSFAEKNNIPLEKLEKITTEKGEYL 116 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A + K +E +K +P + P KSM+W+ S + + RP++ I+ +L Sbjct: 117 GATIEKEGESLELFIKHKIPQLFNQFPQLKSMKWNN-----SDYRFPRPIRWIVSLL--- 168 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLD-HYIRDLEE----AMVLLDPECR 224 +K+I+ ++ + T+ HRF + + D ++ D EE ++ + E R Sbjct: 169 --DDKVIEFEVASVKTDRFTHLHRFMTKPIGRGERKDINHANDYEEITKLGYIIANFEDR 226 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 +++I A + ++ED +L++EI L E+ +G F +YL LP+E+I +T+ Sbjct: 227 KHSIKTQYEGFARQLNASIIEDDELIDEITCLTEFPVGIVGDFSPEYLTLPKEVI-ITVC 285 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + + ++ ++G L F+ SN D + G +V+ ARLEDAL F+K D Sbjct: 286 KHHQRYLNFEKDGKLIPKFLAFSNNAVKDRDI-VKNGYEKVLRARLEDALFFYKED---- 340 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 L K LD + +L + FH K+G+ ++V R L K+A L Sbjct: 341 ----------------LKKKLDDNIEKLK--GIQFHEKLGSMYDKVLRNLELALKLADLT 382 Query: 405 D-ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 D + RA++LSKADL TE+V+EF ELQG +G Y+ Q E +I EH P+ Sbjct: 383 GYKDAEKIKRAVMLSKADLLTEMVKEFDELQGIMGMYYSQKQGEEEEISKSIYEHYLPKT 442 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +N+P + ++LADKLDT+I+F I E P S DP+ +RR +GI+R+++E +ID+ Sbjct: 443 AEDNIPETNLGTLLALADKLDTVISFIKIGELPKPSADPFGIRRNAIGIVRLLVEKEIDL 502 Query: 524 PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L + I+D++++ F RL+ YL + + D+I A+L ++ N+ +K L++ + Sbjct: 503 DLRKVIDDESILDFILSRLESYLQSKGYKTDIINAVLSLKDGNIYRNYLKVKALSQLRNL 562 Query: 584 AKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 E ++ KR+ I+ + K N +++L +S + EK LY + + + Sbjct: 563 PDYENVIMVFKRVGNIIPEDFKFSNVDVNLLVS------QPEKELYKKFIEIKDKFKRFI 616 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++K Y + LL + I+ FFD V++ V+D ++++NRLSLL+ I ++ + + K++ Sbjct: 617 ENKDYDKALGLLLELKPYIDRFFDNVMIMVEDEKLKNNRLSLLKEINDLFRNIADFTKLI 676 >gi|91790040|ref|YP_550992.1| glycine--tRNA ligase [Polaromonas sp. JS666] gi|91699265|gb|ABE46094.1| glycyl-tRNA synthetase beta chain [Polaromonas sp. JS666] Length = 731 Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 210/759 (27%), Positives = 365/759 (48%), Gaps = 94/759 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L+ LK +G+ + + +P RL ++ ++ Sbjct: 7 NLLVELFVEELPPKALKKLGDAFAGVLLEQLKAQGLTTAGSVLTSFASPRRLAAHVTAVA 66 Query: 61 PHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKK--DPKKGDVYLA 111 + +K + ++L P G A+ L++ G ++ +K+ D K ++ Sbjct: 67 VQAADKAVSQKLMPVTVGLDASGQATPALLKKLQALGADALAVAGLKRVPDGKAEALFYN 126 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 L E + K ++ AI K+P PK M + S ++RP ++ + ++ Sbjct: 127 STVIGATLAEGLQKALLE-AIAKLPIPKVMTYQLADG-WSDVKFVRPAHGLVALHGSD-- 182 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ ++ + GNIT+GHRF A P+ +++ D Y L++ ++ R A + Sbjct: 183 ---VVAIEALGLKAGNITHGHRFEAAVDPVVLKNADGYAATLQKDGAVIASFAERKAEI- 238 Query: 231 DAHRLASAV-----GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 A +LA+A G +ED LL+E+ LVE V + F+K++L +P+E + LT+K Sbjct: 239 -ARQLAAAASKVGGGARAIEDDALLDEVTALVERPNVLVCEFEKEFLDVPQECLILTMKA 297 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 NQK F +G L + F++VSNI +D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 NQKYFPLLDAQGKLTHKFLVVSNISPTDA-SAVIGGNERVVRPRLADAKFFFDQDRK--- 353 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR----VLGKKIA 401 K L R+A LD VV+H K+G+QGERV R+ +GKK+ Sbjct: 354 -----------------KTLASRVAGLD--KVVYHNKLGSQGERVIRVSHIAYEIGKKLY 394 Query: 402 QLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 L D+ A L+KADL T++V EFPELQG +G+ YA+ DAIE+H KP Sbjct: 395 PLDDSTAIHAQLAAQLAKADLVTDMVGEFPELQGTMGRYYALNDGLRPDIADAIEDHYKP 454 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI------ 515 R + +P N + + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR+ Sbjct: 455 RFAGDELPRNSVGVIVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRMLTEKDL 514 Query: 516 ------ILENKID----------------IPLSQFIEDQNLIL----------FFHDRLK 543 +L++ +D +P ++ + +++ F +DRL Sbjct: 515 ALDMNALLQSAVDVFGGAVYTEGVSPSAPVPGTKGVLSTGVVMDVQTREKITDFIYDRLA 574 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 L ++ ++A+L L + + + F + + + KR+ IL Sbjct: 575 GSLREQGYSAQEVDAVLALRPQRLGDVAKRLAAVRAFAALPEAPALAAANKRVGNIL--- 631 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 +K + + + P+ L AE+ L + G + Y L ++ P++ Sbjct: 632 KKADGTVEASVRPELLQEAAEQALAEALQSVGPKADAAFTAGDYAASLQGLAALKAPVDA 691 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 FFD V+VN +D +R NRL LL + + V ++ K+ Sbjct: 692 FFDGVMVNAEDPALRANRLGLLATLHQAMNRVADLSKLA 730 >gi|225869964|ref|YP_002745911.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. equi 4047] gi|254781862|sp|C0M9J7|SYGB_STRE4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225699368|emb|CAW92792.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. equi 4047] Length = 679 Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 173/510 (33%), Positives = 270/510 (52%), Gaps = 49/510 (9%) Query: 32 LLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKAIDG 84 LK + Y + + TP RL + + GL+ + E+ GP G KA G Sbjct: 33 FLKANRLSYDAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGPSKKIALDADGQFSKAAQG 92 Query: 85 FLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRW 143 F+R GL T+ D + ++ KG+ Y+ V + + + +DVL VP + + +P SM W Sbjct: 93 FVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKQAKDVLAA-VPEVLASLTFPVSMHW 148 Query: 144 STTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQ 203 + ++F +IRP+ S++ +L ++ ++LD +I G I+ GHRF + Sbjct: 149 AN-----NSFDYIRPVHSLIVLL-----DDEPLELDFLDIHSGRISRGHRFLGEE-TSIT 197 Query: 204 SLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVF 263 S D Y DL V+ + R+ I+ + + +++ D+DLL E++ LVE+ F Sbjct: 198 SADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDIDEDLLNEVLNLVEYPTAF 257 Query: 264 MGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNS 323 MGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V N A +++GN Sbjct: 258 MGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISVRNGNAKHL-QNVIKGNE 316 Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 +V+ ARLED FW+ DQ LS ++ +A+L V FH KI Sbjct: 317 KVLVARLEDGEFFWREDQK------------------LS--IEDLVAKL--AHVTFHEKI 354 Query: 384 GTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKE 440 G+ E + R +V+ +A L +A+ + V RA + K DL T +V EF ELQG +G++ Sbjct: 355 GSVAEHMERTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLLTGMVGEFDELQGIMGEK 414 Query: 441 YAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSK 500 YA+L E + AI EH P +P K+ ++LADKLDTL++F+++ PSGS Sbjct: 415 YALLTGEAAAVATAIREHYLPNSAEGELPETKVGAVLALADKLDTLLSFFSVGLIPSGSN 474 Query: 501 DPYALRRATLGIIRIILENKIDIPLSQFIE 530 DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 475 DPYALRRATQGIVRILEHFGWSIPMDKLID 504 >gi|218441712|ref|YP_002380041.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7424] gi|226737047|sp|B7KD52|SYGB_CYAP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218174440|gb|ACK73173.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7424] Length = 717 Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 207/727 (28%), Positives = 343/727 (47%), Gaps = 83/727 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA +A + L+E+ + + + Y TP RL + +KGL Sbjct: 1 MPSFLLEVGTEELPANFVDEAIAQWQSRIPSSLEEQQLTPEGIEFYGTPRRLAVLIKGLP 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++IEE GP + G KA++GF+R G+ T + +I+ D KG+ Sbjct: 61 AKQSDRIEEVKGPAANVAFKSGKPTKALEGFVRKQGV-TPDEVEIR-DTDKGEFVFVQKN 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L+ +VP I ++ + MRW + RP++ ++ + + Sbjct: 119 ITGRNTTEILQELVPQWITQLEGRRFMRWGD-----GDLRFPRPIRWLVTLW-----DQD 168 Query: 175 IIDLDL----KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+ L+L ++ +TYGHR AP + + Y + L++A V + P RR I Sbjct: 169 ILPLELVNGATQVKSDRLTYGHRILAPESVSIPEASAYQKSLQQAYVEVSPLQRRQTIEQ 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 ++A + V DLL+E++ LVE+ G+F+ +L LP E+I + T+Q+ F Sbjct: 229 QIEKVAKQLKGVAVIPPDLLDEVVNLVEYPSAVAGNFEPDFLNLPTEVITTVMVTHQRYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDG----GAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 + N +L I S+G G I GN RV+ ARL DA F+K Sbjct: 289 PVKATGKTNKNNTLLPYFITISNGDPNKGEIIAAGNERVIRARLADAQFFYK-------- 340 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 D +PL+ + +L+ V F ++GT ++V RI + + IA +D Sbjct: 341 ------------ADCDEPLESYLPQLET--VTFQEQLGTIRDKVDRIMEISQLIADQLDL 386 Query: 407 DV---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 D + ++ +L KADL T++V EFPELQG +G++YA+ E+ + I EH PRG Sbjct: 387 DSGERSEIESTAMLCKADLVTQMVYEFPELQGVMGQKYALASGESPNVALGIFEHYLPRG 446 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P + V LAD++DT+++ + + P+GS DP+ALRRA GII++ ++ I Sbjct: 447 ADDIMPESLTGQVVGLADRIDTIVSIFGLGMIPTGSGDPFALRRAATGIIKVTWYAELPI 506 Query: 524 PLSQFIED----------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEND- 565 + +E ++L FF RL L D I +DL+ A+L END Sbjct: 507 DILDLLEQSSQDFVTAHPDKTSPIESLKSFFIQRLSTLLQDDLHIDYDLVNAVLG-ENDP 565 Query: 566 --------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--IS 615 +LL + D + L ++ K ++ + R ++ E +E+ E I Sbjct: 566 EYTERALRDLLDVRDRAQFLQSIRNNQKIDEIYETVNRSARLAVKGELDTQELDPEKVIR 625 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNV 672 P +E+ Y V+ D + + Y + D L I + FF D VLV Sbjct: 626 PALFEKSSEEHFYKVLIDLVPTTLTAQRERNYQLLVDALGKIAPTVSNFFDGEDSVLVMD 685 Query: 673 DDREVRD 679 ++ EVR+ Sbjct: 686 ENLEVRE 692 >gi|242309038|ref|ZP_04808193.1| glycyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239524462|gb|EEQ64328.1| glycyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 682 Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 220/725 (30%), Positives = 340/725 (46%), Gaps = 76/725 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI ++E+PA ++ L +L+ ++ + Y+TP RL + Sbjct: 5 FLLEIGTQELPAIPLLAEIPNIKQKLSKILQNHRLLC-DFDFYYTPRRLVIIANQFPTSQ 63 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP + G +A F + G+ I KD K ++ PK Sbjct: 64 SPQVLEFFGPPTTIAYKDGNPTQAALSFFKKCGITQEEASTITKDNK--EILYFKKESPK 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +D+L+TI ++ + + K+MRW S+IRP+ ILC+L I Sbjct: 122 APAQDLLQTITKEFLESLNFGKTMRWGDQKE-----SFIRPISWILCLL-----NNTPIS 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L+L + N T+ HR + P +V S+D+Y L+ MV+L+ E RR IL + + S Sbjct: 172 LNLYGVVSQNQTFIHRNISFAPQEVTSIDNYFEILKRGMVILNQEDRRTKILQEIQEIQS 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +++ D++LLEEI+ + E+ G F +++L LP I ++K NQ+ F T E Sbjct: 232 QKNIKVEIDENLLEEIVCITEYPTALFGEFSERFLELPAPCIITSMKVNQRYFATYKGEN 291 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN A D A I+QGN +V+ ARLEDAL F+ D N LK Sbjct: 292 -LYNGFIVVSNSLAQDSNA-IIQGNIKVLRARLEDALFFYHNDLKNGFMPEKLK------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-------DADVAL 410 +V F +G+ ++ R R + K IA L + D+ L Sbjct: 344 ------------------NVTFVEGLGSMWDKTQRERQIIKLIAPLFTKNLEKENQDIGL 385 Query: 411 ----VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D+A + SKADL +E+V EF ELQG +G YA + AI+E P Sbjct: 386 TLEILDQASMFSKADLMSEMVYEFTELQGIMGYYYANALGYDSKVALAIKEQYLPNSEES 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI--- 523 +P+N IS V+LA KLD L ++I++ PSGS+DP+ALRRA +GII+IIL + Sbjct: 446 PLPSNLISAFVALAYKLDNLFALFSIHKIPSGSRDPFALRRAAIGIIKIILHFNLSFDLQ 505 Query: 524 -------PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 PL + + Q L F +R+ D L+ AIL N+L I + Sbjct: 506 KISSLLSPLYKPFDLQQLENFILERMDSMF---DYNPSLLRAILATNEKNILQIYQKLDA 562 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 LN +A + + KR + I ++ N SL I LL E L+ + Sbjct: 563 LNSVLKNADKNLLMQTFKR---VANITKEVNLSSSLAIKQDKLLATEEIELHKAFCLY-- 617 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +E Y + +L + + FFD+VLVN D + R+NR +L+ I L + Sbjct: 618 --EEKSPTLNYQEQLQMLLDLNPLLSRFFDKVLVNAPDEDFRNNRKNLIARIYQAFLNIA 675 Query: 697 NVQKI 701 ++++I Sbjct: 676 DIREI 680 >gi|296273209|ref|YP_003655840.1| glycyl-tRNA synthetase subunit beta [Arcobacter nitrofigilis DSM 7299] gi|296097383|gb|ADG93333.1| glycyl-tRNA synthetase, beta subunit [Arcobacter nitrofigilis DSM 7299] Length = 671 Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 196/675 (29%), Positives = 342/675 (50%), Gaps = 68/675 (10%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQI 99 ++TP RL L+ + + + E+ G V K A GF + ++ + D + Sbjct: 46 FYTPRRLVLWHREFNLTQEDTTVEQYGAPVAIAYKDGKPTGAAIGFAKKCAIE-VDDIKT 104 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 + K +Y K K +D+L ++ I + + KSMRW++ S+IRP+ Sbjct: 105 INNGKDEVLYFKKEEKGKA-SKDLLNEMINEFINALDFGKSMRWASRTD-----SFIRPI 158 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLL 219 +S++ +L E+I++ +L + N ++ HR + P Y L++ V+L Sbjct: 159 RSLIMML-----GEEIVEGELYGVKSSNKSFAHRMVSYEPFSFDFAGDYFCKLDKNGVIL 213 Query: 220 DPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 PE R+ IL+ + S L++ D +LLEEI+ + E+ +GSFD+++L LPEE+I Sbjct: 214 YPEDRKKIILDQMKDIESQNNLKIDIDPELLEEIVAITEYPTALLGSFDEEFLELPEEVI 273 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 ++K +Q+ F +EG L+N FI+VSN + D + IV GN +V+ RL DA+ F+K Sbjct: 274 VTSMKEHQRYFAVY-KEGKLSNNFIVVSNSKTEDF-SFIVAGNEKVLRPRLSDAMFFYKN 331 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D NN L LK ++VF +G+ E+ R + Sbjct: 332 DLNN-----GLSNEGLK-------------------NLVFVDGLGSMYEKCEREVKIASY 367 Query: 400 IAQLID-ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 +A++ + + L+ +A++LSKADL +E+V EF ELQG +G YA NE+ A++E Sbjct: 368 LAEVFEIKEKELLTKAVMLSKADLMSEMVYEFTELQGLMGYYYAKAANEDKLVFTALKEQ 427 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 P G ++P+NK S V+L+ KLD L+ +++ + P+GSKDP+ LRRA GI++I +E Sbjct: 428 YLPDGEDSDLPSNKFSAIVALSYKLDNLMGLFSVGKIPTGSKDPFGLRRAAAGIVKISME 487 Query: 519 NKIDIPLSQFIED----------QNLILFFHDRL-KLYLHDRDIRHDLIEAILRPENDNL 567 +K+++ LS I++ + LI FF++RL K++ D+ +I+A+L ++ Sbjct: 488 HKLEVNLSNIIDNLLDTYSGLKKEKLIEFFNERLFKIF----DVNPSVIKAVLGSGEGDI 543 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I I LN S ++ + KR+ I+ + N +L I + EK L Sbjct: 544 YKISQKICALNPIVLSDDFKESSTTFKRVANIIKDIDVNN---TLNIDESLFEQDEEKDL 600 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y + + + + Y + D L S+ ++ FFD V VN +D ++ NR +L+ Sbjct: 601 YETYT-----LLINKKYNTYEEELDALFSLKPKLDKFFDNVFVNHEDENIKTNRKNLIGL 655 Query: 688 IKNIILIVINVQKIV 702 + + ++++I Sbjct: 656 VYQAFRNIADIKEIT 670 >gi|238798356|ref|ZP_04641839.1| Glycyl-tRNA synthetase beta subunit [Yersinia mollaretii ATCC 43969] gi|238717814|gb|EEQ09647.1| Glycyl-tRNA synthetase beta subunit [Yersinia mollaretii ATCC 43969] Length = 682 Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 201/716 (28%), Positives = 326/716 (45%), Gaps = 61/716 (8%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 +EI +EE+P + AE + L + + + Y P RL + + LS + Sbjct: 1 MEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVVWYAAPRRLAVKVAHLSAAQAD 60 Query: 66 KIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 61 REVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTDKGEWLLYRAHVKGESA 120 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E ++ + Sbjct: 121 QL--LLAGMVNAALSKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSELISGTVLGI 173 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLAS 237 D I GHRF + + D Y + L E V+ D E R+ I DA A Sbjct: 174 D-----SDRIIRGHRFMGEAEFALDNADQYPQLLLERGKVIADYELRKTIIKRDAELAAQ 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F G Sbjct: 229 KMGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDTAG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D I+ GN +VV RL DA F F Sbjct: 289 HLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF--------------------F 327 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N D K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA +L Sbjct: 328 NTDRKKRLEDNLPRLE--SVLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAGLL 385 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ + Sbjct: 386 SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACAL 445 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 ++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 446 AIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRLYG 505 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +I F R + + D D I+A+L +K + F + Sbjct: 506 SKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTYFRT 565 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + KR+ ILA K ++ + L AE +L + ++ Sbjct: 566 LDAAATLAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLEPVF 622 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 623 AAGQYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADI 678 >gi|323142367|ref|ZP_08077199.1| glycine--tRNA ligase, beta subunit [Phascolarctobacterium sp. YIT 12067] gi|322413251|gb|EFY04138.1| glycine--tRNA ligase, beta subunit [Phascolarctobacterium sp. YIT 12067] Length = 723 Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 214/770 (27%), Positives = 342/770 (44%), Gaps = 116/770 (15%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EEIPA+ L + + E + ++ ++ Y TP R+ G++ Sbjct: 1 MEKLLFEIGTEEIPAKFMPAILAQLKDLTEKKMTELRIPFEAVKTYGTPRRMTFIASGVA 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E GP GA KA GF R G+ +K+ + D AV Sbjct: 61 EAQEDSTVEAKGPSAKIAFVSGAPSKAAIGFARGQGVD------VKELVVRDDYVYAVKH 114 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++D+L ++ + + +PK+MRW+ F ++RP++ ++ + ++ Sbjct: 115 LAGQPVKDLLPGLLTDILTSLNFPKNMRWADHE-----FKFVRPIRWLVALF-----GDE 164 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHP----------------------------------- 199 +I +++ + G + GHRF P Sbjct: 165 VIPVEITGVKSGKFSRGHRFLRPSALDNAKAHESIGDAAKALFDTVKSKAKNAVASAAIG 224 Query: 200 ----IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 +++ D Y + + + V++D RR I LA A G ++DLLEE+ Sbjct: 225 TIGAVEIPDADSYEKVMYDNYVMVDQNARRELIRQQVTDLAIAEGGHAEINEDLLEEVNY 284 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGG 315 LVEW G F++K+L LP+E I ++ +Q+ F +G L N FI V N GG Sbjct: 285 LVEWPTALCGKFEEKFLALPKECIITPMREHQRYFPVLAEDGSLLNKFITVRN-----GG 339 Query: 316 AA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 + GN RV+ ARL DA F FN D + L R+ + Sbjct: 340 KEHLEIVAHGNERVLRARLSDAEFF--------------------FNEDRKQTLADRLEK 379 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDRAIVLSKADLCTEIVRE 429 L V F +G ++ R+ +A I+A D ++R +L K DL T +V E Sbjct: 380 LKT--VSFQEGLGNMNDKSKRLVQAVDMLAMAINAKVDKEKLERTALLCKCDLVTGMVIE 437 Query: 430 FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINF 489 F ELQG +G+EYA L E I EH PR + +PT I +ADKLD + Sbjct: 438 FTELQGVMGREYAKLDGEAPEVALGIYEHYLPRFAGDELPTTDIGRLTGIADKLDNICAT 497 Query: 490 WAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-----------EDQNLIL-- 536 ++ P+GS+DPYALRR LGII I+L+ + L + I ED ++ Sbjct: 498 FSRGLAPTGSQDPYALRRQALGIINILLDGNYHVSLYKVIAGALYLLNIPAEDTKKLVPQ 557 Query: 537 ---FFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 F RL+ L D+ IR+D+++A+L + ND+ +V K LN F +SA+ + + Sbjct: 558 IAEFMKQRLRNMLMDQGIRYDVVDAVLADQMNDDFTDLVARAKALNSFVASAEAPALIQA 617 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 A R+ + KK E S I+PQ +EAE L+ + + Y + Sbjct: 618 ATRVANLC----KKIEEES-AINPQLFAVEAEGALHNAAMAASKEVLVAATKYDYAAVMA 672 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + +PI FF+ V+V +D V++NRL+LL +K+I V ++ IV Sbjct: 673 EAVKLVDPINKFFEDVMVMDEDVRVKNNRLALLAAVKDITHAVGDLSVIV 722 >gi|293393757|ref|ZP_06638064.1| glycyl-tRNA synthetase [Serratia odorifera DSM 4582] gi|291423584|gb|EFE96806.1| glycyl-tRNA synthetase [Serratia odorifera DSM 4582] Length = 689 Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 200/718 (27%), Positives = 326/718 (45%), Gaps = 61/718 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFSAELDNANLAHGEVNWFAAPRRLALKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ E+ GP + G KA +G+ R G+ ++K D KG+ L + Sbjct: 66 ADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAQVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L + +I Sbjct: 124 GQSAQQLLAGMVSTALSKLPIPKLMRWGDKTT-----QFVRPVHTVTMLL-----GDALI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + I GHRF +++ D Y + L E V+ D R+ I DA Sbjct: 174 PGTVLGIDSARTVRGHRFMGEAQFTLENADQYPQILLERGKVVADYAARKAIIKRDAELA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 234 AEKIGGKADLSESLLEEVASLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVYDA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALSGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 391 LLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPQSLVAC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 451 ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAARL 510 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +++ F R + + + D I+A+L +K + F Sbjct: 511 YGSKLTNANVVDDVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVTHF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 571 RTLEEAAALAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLEP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L ++ ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 628 FFAEGRYQDALVELAALRATVDEFFESVMVMAEDDAVRVNRLTLLSKLRELFLQVADI 685 >gi|116690722|ref|YP_836345.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia HI2424] gi|116648811|gb|ABK09452.1| glycyl-tRNA synthetase beta chain [Burkholderia cenocepacia HI2424] Length = 699 Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 201/683 (29%), Positives = 334/683 (48%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGL----QTIS 95 +Y TP RL + ++ + +P+K + E++ P A GK + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPDKQVREKVLPVSVALDAEGKPTAPLAKKLAALGHPNASIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + +D K + + + D L+ + A+ K+P PK M + S + Sbjct: 112 DLERAQD-GKAEAFFINYSAAGATLADGLQAALDEALAKLPIPKFMTYQRPDG--SDVKF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++++ + + G+ T GHRF + + +Q Y L ++ Sbjct: 169 VRPVHRLTVL-----HDDRVVPVTAFGVDAGDTTLGHRFLSDGLVAIQHARAYADTLRDK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+ RR I + A+ G +V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVIAHFADRRETIRTQLNEHAN--GDTVVMPESLLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G I++GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDVAGKLRSRFLIVSNIETKTPGE-IIEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL R+ +L +VV+H K+G+ RV R+ Sbjct: 341 FFFEQDKK--------------------KPLADRVPQL--ANVVYHNKLGSALARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD A RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 ALAGEIAPAIGADTAHAKRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEADDVALA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFIEDQN---------------LILFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + + + FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVSLLHTAHARFAGVPGVAESTDAIFAFFMDRLRGLLRERGYSAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L + +V + + EF A+ E + KRI IL +K + + P L Sbjct: 559 LSLNPTRIDDLVARLDAVREFTRLAEAEALAAANKRISNIL---KKSEGGANGAVQPTLL 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L+ ++ H+Q ++ + Y L ++ P++ FF+ V+VN +D +R Sbjct: 616 VEAAEKALHEQLAAVTPHVQSQLEARAYTGALSALAALRVPVDTFFNDVMVNAEDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|259046827|ref|ZP_05737228.1| glycyl-tRNA synthetase, beta subunit [Granulicatella adiacens ATCC 49175] gi|259036450|gb|EEW37705.1| glycyl-tRNA synthetase, beta subunit [Granulicatella adiacens ATCC 49175] Length = 689 Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 202/709 (28%), Positives = 355/709 (50%), Gaps = 74/709 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ ++E L+ + K+E + +++ + TP RL + + GL ++ E GP Sbjct: 15 PAQYVRTSSEQLAKRVEDFFKDENLEFESFEAFATPRRLAVRVNGLVEEQADREEIFKGP 74 Query: 74 RV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PKRLIEDVLKT 126 + GA KA +GF+R GL T D +++ G Y+ V + + ++V+K Sbjct: 75 SLAIAQKDGAWTKAAEGFVRGKGL-TTDDIYVEE--VNGVEYIHVKQHIAGKSTKEVVKN 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V I + +P +MRW+ H+ F ++RP+ I+ L + E+I LD+K G Sbjct: 132 LSSV-ITDMKFPVTMRWAA-HT----FEYLRPIHWIVA-LYGNEVIEEIGVLDVK---AG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 + GHRF +++ + Y + L E V+++ + R+ + LA+ + D Sbjct: 182 RTSRGHRFLGKEAT-IENPESYEKALAEQFVIVNQDERKALVRKQIEELAADNNWIIPID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLLEE+ ++E+ F G+FD+KYL +PE ++ ++K +Q+ FV +E L F+ V Sbjct: 241 EDLLEEVSSILEYPTAFAGTFDEKYLVVPEPVLVTSMKEHQRYFVVYNQEKQLLPFFVSV 300 Query: 307 SNIQASDGG-AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 N +D + +GN +V+ ARLEDAL F++ D L P+ Sbjct: 301 RN--GNDYMIENVAKGNQKVLTARLEDALFFYEED--------------------LKIPM 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALV-DRAIVLSKADL 422 + +L+ L+ FHAKIG+ E++ R+++L +IA+ ++ +DV + RA + K DL Sbjct: 339 TTFLKKLETLN--FHAKIGSMTEKMDRVQLLVGRIAKELNLPSDVVVTAQRAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EFPELQG +G+ YA+ Q E AI EH P +P++ +++ADK Sbjct: 397 VTNMVGEFPELQGIMGEIYALKQGETPEVAQAIREHYMPTSADGELPSSVPGALLAVADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT ++F A P+GS DPYALRR +G+++I+ +I + F + Sbjct: 457 LDTFLSFTAAGMLPTGSNDPYALRRQVMGLVQILAAFDWNIEIEDFTKLLLGLDYAEFLS 516 Query: 531 ------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 ++ ++ F +R+ + RHD+I+AI+ N + ++ + +K + + Sbjct: 517 GKEEEVEEFILSFIRERVAQRIATITKRHDIIDAIV---NSHTSSVPEQLKAAKVLSAVS 573 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + E+F + + +++ I K + S EI L E+E+ L I + + +Q Sbjct: 574 ESEEFKGITEALNRVINISAKAQDDASGEILEDRLETESERTLVKAIKELHSKVQTLTPE 633 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y L ++ I FF++ +V VDD R NRL L + IIL Sbjct: 634 ELYSH----LEAMAPKINDFFNENMVMVDDEATRRNRLRFLGLLSEIIL 678 >gi|225182111|ref|ZP_03735539.1| glycyl-tRNA synthetase, beta subunit [Dethiobacter alkaliphilus AHT 1] gi|225167198|gb|EEG76021.1| glycyl-tRNA synthetase, beta subunit [Dethiobacter alkaliphilus AHT 1] Length = 695 Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 204/725 (28%), Positives = 343/725 (47%), Gaps = 67/725 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EEIPAR A E L L E + + + TP RL L + L+ Sbjct: 7 LLEIGMEEIPARFMEPALEQLEKNARAALTEARLSFGTVSTLGTPRRLTLLVADLADKQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E++ GP G KA GF RS G+ D ++ + AV + Sbjct: 67 DLSEKKKGPAKKAAFDAEGNPTKAAMGFARSQGVSV--DELFTEEISSVEYVFAVKNEAG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L + I+++ +PK M W + + RP++ + + E+ + Sbjct: 125 GETLAILPELCTRLIRELSFPKPMFWFSKE-----IRFARPIRWLAALY-----GEQEVP 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G TYGHRF + P+ + + Y+ +EE V++DP R I+ + A+ Sbjct: 175 FSFAGLTAGRTTYGHRFLSEGPLVLPNASAYLSAMEENSVVVDPAERSKLIVAQVEQAAA 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 A+G D+DLLEE++ LVE+ + +G+F ++L +P+E++ ++ +Q+ F Sbjct: 235 ALGGRSEVDQDLLEEVVNLVEYPKAVVGNFAAEFLEVPQEVLITAMRAHQRYFPVFDEND 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 VL FI +SN + + GN RV+ ARL DA F++ D+ Sbjct: 295 VLLPHFITISNGTRDEYLDNVRAGNERVLRARLADARFFFEEDRK--------------- 339 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRA 414 KPL + LD D+VF +GT ++ R++ L +++A D + R Sbjct: 340 -----KPLADFVTMLD--DIVFMEPLGTMRKKTERLKSLAEELAAEAGYDQSTREAASRG 392 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSKADL T +V EFPELQG +G YA L E+ A+EEH PR ++ + Sbjct: 393 AYLSKADLMTHMVYEFPELQGTMGMHYARLSGESEDVSRAVEEHYAPRFAGDSPAKSAAG 452 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADK+DTL + + PSGS+DPYALRR+ LG++ +LE+++ + L++ Sbjct: 453 AMVAIADKMDTLAACFGLGLIPSGSQDPYALRRSALGVVATMLEHQLTMSLNRLCALALE 512 Query: 531 --DQNLIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 Q++ F R++ ++ +R+D+I+A L E D+L I+ + L Sbjct: 513 GLTQDITRPAAEVVGEMEEFLWQRVRFLFAEKGLRYDVIDASLGAEADDLPGILARAEIL 572 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + + + L R + +++N +S + L+ AEK L+ + Sbjct: 573 QSKLDTPELTRILTPFTRAANLTRDVQEQN------VSVESLVEPAEKELFQAAGEAKDV 626 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + + + L + PI+ FF+ V+V V+D V+ NRL+LLQY+K + L + + Sbjct: 627 VDNAAARGDFAAVFAALSPLYAPIDRFFNDVMVMVEDEAVKLNRLALLQYVKALFLHLGD 686 Query: 698 VQKIV 702 + KIV Sbjct: 687 LSKIV 691 >gi|56751488|ref|YP_172189.1| glycyl-tRNA synthetase subunit beta [Synechococcus elongatus PCC 6301] gi|56686447|dbj|BAD79669.1| glycyl-tRNA synthetase beta chain [Synechococcus elongatus PCC 6301] Length = 728 Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 192/661 (29%), Positives = 318/661 (48%), Gaps = 93/661 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A L L E + + Y TP RL + ++GL Sbjct: 1 MPAFLLEVGTEELPASFVAAAIAQWQNWLPTRLAEAQLTTTQISVYGTPRRLAVLIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A K A GF R G++ +SD +++ K V++ R Sbjct: 61 DRQPDREEEVKGPPASAAFKDGEPTPAAIGFARKQGVE-VSDFTVRETDKGAFVFVQK-R 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + + DVL+++VP Q + + MRW + RP++ ++ ++ ++ Sbjct: 119 EVGQPLADVLQSLVPSWTQDLEGKRFMRWGDGD-----LRFSRPIRWLVALI-----DDQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L + ++ GHR P P+ + Y+ LE A VL+DP R+ I Sbjct: 169 VLPLELTSGGSTVQSDRLSRGHRVLHPEPVAIAQASDYLATLEAASVLVDPAQRQAKIEA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +AS VG + +DLL E++ L EW +G F++++L LP E+ + + ++Q+ F Sbjct: 229 QTAAIASKVGGQAELPEDLLAEVVHLTEWPTAVLGQFEERFLSLPAEVSTMVMTSHQRYF 288 Query: 291 ----VTRTREGV-------LANCFILVSNIQASDGGAA--IVQGNSRVVAARLEDALHFW 337 T R+ L CF+ +SN D A+ I GN+RV+ ARL D +F+ Sbjct: 289 PIYQATAQRDPAAIDARSELLPCFVTISN---GDPAASETIAAGNARVIRARLADGEYFY 345 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 + D +PL+ +++L+ V F ++G+ +V RI + Sbjct: 346 RTDSK--------------------QPLESFLSQLEA--VTFQEQLGSVRSKVDRIGAIA 383 Query: 398 KKIAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 ++ + +D LV RA L KADL +++V EFPELQG +G++YA + E + A Sbjct: 384 HRLCDQLSIHSSDRLLVSRAAQLCKADLVSQMVYEFPELQGVMGEKYARVSQEPDAVATA 443 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 I EH P+G + +P V+LAD+LDTL+ + + PSGS DP+ALRRA G++ Sbjct: 444 IREHYLPKGAGDQLPQTLTGRMVALADRLDTLVCIFGLGLLPSGSSDPFALRRAANGVLN 503 Query: 515 IILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHD-RDIRH 553 I+ + ++ + L+ I+ Q L FF RL+ L D + I + Sbjct: 504 ILWDGQLRLDLTALIQGIAADFHHAFPKLAGNAETLIQQLTDFFGQRLRTLLQDEQGIDY 563 Query: 554 DLIEAILRPENDNLL--TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 DL+ A+L + N L I D + LN K L + ++ +++A+ E NR Sbjct: 564 DLVNAVLGDGDANYLLRAIADPLDALNR-------AKLLQTLRQDGRLVALYETVNRATR 616 Query: 612 L 612 L Sbjct: 617 L 617 >gi|332975857|gb|EGK12735.1| glycyl-tRNA synthetase beta subunit [Desmospora sp. 8437] Length = 696 Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 208/734 (28%), Positives = 358/734 (48%), Gaps = 79/734 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 ++L+EI EEIPAR + L L L+E + + + Y TP RL + ++ ++ Sbjct: 5 NWLVEIGCEEIPARFVESGVQQLREKLTRWLEENRLSFGKVHTYATPRRLAVLVENVADA 64 Query: 63 SPEKIEERLGP--RV-----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + EE GP R+ G+ KA +GF R G IS Q++ KG+ Y+ + Sbjct: 65 QADVEEEVRGPAKRIAVAEDGSWTKAAEGFARKQG---ISPDQLQLREYKGETYVFAHKH 121 Query: 115 -KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + KR + + + V ++ + +PK+MRW + +IRP++ ++C+ E Sbjct: 122 QEGKRTATLIGEELANV-LKGLHFPKAMRWGDRRT-----RFIRPVRWLVCLF-----GE 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ + + GN T+GHRF Q D Y+ L + V+++ E RR I H Sbjct: 171 EVVPVKWAGVTGGNRTFGHRFLGGETEIGQPAD-YVETLHDQKVMVEMEARREEIRQQLH 229 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R+ G + D++LL+E+ LVE GSFD+++L LPE ++ T++ +Q+ F R Sbjct: 230 RMEEQNGWRIPVDEELLDEVTQLVELPTALSGSFDERFLELPEAVLITTMREHQRYFPVR 289 Query: 294 TREGVLANCFILVSNIQASDGGA--AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R+ L F+ V N D A + +GN +V++ARL DA F++ D Sbjct: 290 DRDHHLLPHFVTVRN---GDNRALEQVAKGNEKVLSARLADARFFYEED----------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 LK ++ + +A+LD VV+ +G+ G++ RIR L +++A L + + Sbjct: 336 ---LKLSISTA------VAKLDQ--VVYLEGLGSVGDQARRIRKLVEELADQLGLENPER 384 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + + RA + K DL T +V EFPEL G +G+EYA E+ AI EH PR + + Sbjct: 385 SRLFRAADICKFDLSTHMVDEFPELSGVMGEEYARRAGEDPEVARAIMEHHYPRFAGDRL 444 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-------- 520 P ++ +SLADK+D ++ +++ +P+GS+DPY LRR ++ I+++ Sbjct: 445 PEGRLGSLISLADKMDAVVAAFSLGIQPTGSQDPYGLRRKASAVVHILMDRGWSRLPLSL 504 Query: 521 -IDIPLSQFIED-----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 ID+ L++ D + + FFH RLK L ++ IR+DLI+A+L + + Sbjct: 505 LIDLSLNRLQADGWLQRDREQVKEEISAFFHLRLKGALQEKGIRYDLIDAVLLSDLSSPQ 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +++ + L + + E F + + + + K E L+++ L + AE+ LY Sbjct: 565 LMLEKARVLTDAVAR---EDFKMIVEGFSRASNLAAKGGSE--LQVNRDLLEVWAERELY 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A I + + + + + I FFD VLV +D R NRL+LL+ Sbjct: 620 ASIRSASEDFSAAEKRQDAEGMFAAIAKLAPAIHRFFDDVLVMAEDETTRTNRLALLRET 679 Query: 689 KNIILIVINVQKIV 702 + KIV Sbjct: 680 DRLTKRFAAFNKIV 693 >gi|308069925|ref|YP_003871530.1| glycyl-tRNA synthetase subunit beta [Paenibacillus polymyxa E681] gi|305859204|gb|ADM70992.1| Glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) [Paenibacillus polymyxa E681] Length = 691 Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 211/736 (28%), Positives = 345/736 (46%), Gaps = 85/736 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI EE+PAR A + L + L + Y + Y TP RL + +K ++ Sbjct: 4 DLLFEIGLEEVPARFIPNAIQQLKQRMTAWLDSSRIAYGAVEAYATPRRLAVLVKDVAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF RS G + Q G Y+ + Sbjct: 64 QEDINEEVKGPSRKIALDEAGNWSKAALGFARSQG---VDPEQFTFKELGGVEYIYATKS 120 Query: 116 PKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + DVL + + + +PK MRW++ F ++RP++ ++ + + Sbjct: 121 SIGVPTADVLSEGLLHILHAMTFPKFMRWASYD-----FKFVRPIRWLIALFGGD----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I++L++ + GN+T GHRF + V+S Y+ L + V+++ E R++ I+ Sbjct: 171 IVNLEIAGVQSGNVTRGHRFLGQDAV-VESPADYVEVLRKQHVIVNIEERQSLIVKQIEA 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ + DLLEE++ LVE V G FD +L +P++++ +++ +Q+ F Sbjct: 230 LAAEKDWTIAVKDDLLEEVLYLVETPTVLFGGFDPAFLNIPKDVLITSMREHQRYFPVLD 289 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 R G L F+ V N S I +GN +V+ ARL DA F++ DQ Sbjct: 290 RTGELLPYFVTVRN-GGSQSLEVIAKGNEKVLRARLSDAKFFYEEDQK------------ 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVA-LV 411 L+ LSK + +VFH ++GT G++V RIR + +A+ + D V Sbjct: 337 LEIKDALSK----------LESIVFHEELGTVGDKVRRIRRIADALAEKLRVSPDTQESV 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA + K DL T++V EFPELQG +G++YA E A+ EH +PR E VP+ Sbjct: 387 SRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEREEVARAVFEHYQPRFAGETVPST 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 VS+ADK+DT+ ++I P+GS+DPYALRR GI++I+L+ K+ LS Sbjct: 447 NAGAIVSIADKIDTITGCFSIGIIPTGSQDPYALRRQAAGIVQILLDRKLSATLSDVF-- 504 Query: 532 QNLILFFH----------DRLKLYLHD-----------RDIRHDLIEAILRPENDNLLTI 570 N+ L H D ++ LH+ +R+D+++A+L D++ ++ Sbjct: 505 -NIALEVHGNLGNMKRSADEIRKELHEFFGLRVKKLLSETLRYDVVDAVLAAGYDDVASV 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY-- 628 V+ L + GE F + + ++ + K + ++ + EK LY Sbjct: 564 VNRGTALMTAIQT--GEVFKATVESFNRVGNLAAKA---VHKSVNTSEFTEQGEKTLYEA 618 Query: 629 --AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + + +QE D R L SI + FFD V+V +D VR+NRL+LL Sbjct: 619 WHSAYESYSVALQEG-DATRALA---LASSITPAVTAFFDSVMVMAEDDAVRNNRLALLA 674 Query: 687 YIKNIILIVINVQKIV 702 I + + + K+V Sbjct: 675 AIDSELKRFADFSKLV 690 >gi|284107196|ref|ZP_06386337.1| Glycyl-tRNA synthetase beta subunit [Candidatus Poribacteria sp. WGA-A3] gi|283829943|gb|EFC34222.1| Glycyl-tRNA synthetase beta subunit [Candidatus Poribacteria sp. WGA-A3] Length = 698 Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 203/736 (27%), Positives = 339/736 (46%), Gaps = 94/736 (12%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPR-- 74 M A L ++ G L + + + +R + TP R+ + + GL+ ++E LGP Sbjct: 1 MVQPAMTQLGELIDGFLADHRLSHDQIRTFGTPRRVAVLVTGLAAKQTPAVQEALGPSKS 60 Query: 75 -----VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL-IEDVLKTIV 128 G KA GF +S G+ + + + ++ PK VYL +++ K L VL + Sbjct: 61 VAFDAQGHPTKAAQGFAKSQGVD-VGELETRETPK--GVYLCAVKREKGLPASQVLTEHL 117 Query: 129 PVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNI 188 P +Q++ +PK+MRW+ S + RP++ + ++ + + D + G Sbjct: 118 PGLLQQLTFPKTMRWNA-----SGIRYPRPIRWLAAVV-----GSRPLSFDFAGVRSGGH 167 Query: 189 TYGHRF-------HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 ++GHRF A I+++ + Y L V +DP RR A+ +LA +V Sbjct: 168 SWGHRFLSGGKAGAASRGIRIRRPELYEAALARGGVTVDPARRREALAGQLKQLARSVKG 227 Query: 242 ELVE--DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 + + ++LL++ + +E V GSFD+ YL +P+E++ +++ +Q F R+G L Sbjct: 228 RVYQANHEELLDQAVFSLECPNVVCGSFDRMYLAVPQEVLIASMEEHQGFFSVVNRKGEL 287 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 F +N++ + I GN RV+AARL DA +F F+ Sbjct: 288 FPRFFAPTNMELRNM-ELIRVGNERVLAARLADARYF--------------------FDE 326 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-----ALVDRA 414 D L R+ L VVFH ++G+ E+ R L + L DA RA Sbjct: 327 DRKVKLADRVQELH--GVVFHKRLGSLYEKTQRTIDL---VGALADAAGIPEVKESCQRA 381 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSKADL T +V EFP LQG +G+ YA E++ C AI E+ +PR P + +P I Sbjct: 382 AFLSKADLVTGMVGEFPTLQGVMGEHYAAHDGESVEVCQAIGEYYRPRTPDDAIPETTIG 441 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 ++LAD+L+TL F+ PSGS+DP+ LRR G+IRI++E ++I L+ + Sbjct: 442 RLLALADRLETLAAFFYAGMVPSGSEDPFGLRRGAFGVIRIVIEAGLNINLADILSKAER 501 Query: 535 IL-------------------------FFHDRLKLYLHD-RDIRHDLIEAILRPENDNLL 568 ++ F +RL+ Y R D+++++L + Sbjct: 502 LIVEQGVKAGGHPSASLRAGSGPPPRKFLEERLRYYGRTVAGYREDVMDSVLARADGADC 561 Query: 569 TIVDL---IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 + DL + L S E ++ KR +I+ E R + + L E+ Sbjct: 562 DLRDLFLRMDALQAITSQQDFESLIVGFKRAHRIVEKEGWTARTVEASL----LTHPTEQ 617 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+ + + S+D YH L + PI+ FFD VLVN + EVR NRLSLL Sbjct: 618 TLHQAMDTATRGVGHSLDVHDYHGALKYLIGLKSPIDEFFDGVLVNAPEPEVRANRLSLL 677 Query: 686 QYIKNIILIVINVQKI 701 + + ++ ++ +I Sbjct: 678 RQVDDLFATFGDLSQI 693 >gi|260583948|ref|ZP_05851696.1| glycyl-tRNA synthetase, beta subunit [Granulicatella elegans ATCC 700633] gi|260158574|gb|EEW93642.1| glycyl-tRNA synthetase, beta subunit [Granulicatella elegans ATCC 700633] Length = 691 Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 205/711 (28%), Positives = 357/711 (50%), Gaps = 76/711 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ ++E L+ + K+E + ++++ + TP RL + + GL ++IE GP Sbjct: 15 PAQYVRTSSEQLATRVEDFFKQENLAFESVEAFATPRRLAVRVNGLEEEQKDRIEIFKGP 74 Query: 74 RV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTI 127 + GA KA +GF+R GL T D ++ +++ L K K ++V+K + Sbjct: 75 SLAIAQKDGAWTKAAEGFVRGKGL-TTDDIYVETIKDVDYIHVKQLLKGKS-TKEVVKNL 132 Query: 128 VPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGN 187 V I + +P +MRW+ H+ F ++RP+ I+ L E+ E+I LD+K G Sbjct: 133 SSV-ITDMKFPVTMRWAA-HT----FEYLRPIHWIVA-LYGEEVIEEIQVLDVK---AGR 182 Query: 188 ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 ++ GHRF ++ S + Y + L E V+++ + R+ + LA+ + D+ Sbjct: 183 VSRGHRFLGKD-TEIASPEQYEKALAEQFVIVNQDERKALVRKQIEELAAKNAWIVPIDE 241 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 +LLEE+ ++E+ F G+FD+KYL +PE ++ ++K +Q+ FV +G L FI Sbjct: 242 ELLEEVSSILEYPTAFAGTFDEKYLVVPEPVLVTSMKEHQRYFVVYNAKGKLQPYFI--- 298 Query: 308 NIQASDGGAAIVQ----GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSK 363 A +G +++ GN +V+ ARLEDAL F++ D+ Sbjct: 299 --SARNGNDYMIENVAKGNQKVLTARLEDALFFYEEDKK--------------------V 336 Query: 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKA 420 P+ + +L+ L+ FHAKIG+ E+++R+++L +IA ++ DV RA + K Sbjct: 337 PMTAFLKKLETLN--FHAKIGSMTEKMNRVQLLVGRIASELNLDAKDVETAQRAAEIYKF 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T +V EFPELQG +G+ Y+ E AI EH P +P++ +++A Sbjct: 395 DLVTNMVGEFPELQGIMGEIYSKNYGETPEVARAIREHYMPISADAELPSSVPGALLAIA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--LENKIDI----------PLSQF 528 DKLDT ++F A P+GS DPYALRR +G+++I+ E +DI + F Sbjct: 455 DKLDTFLSFTAAGMLPTGSNDPYALRRQVMGLVQILEAFEWHLDIDDFAKTLLALDYASF 514 Query: 529 IED-----QNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + D Q IL F +RL + RHD+IEA+L ++++ + + L + + Sbjct: 515 LVDKKEDVQAFILGFIRERLAQRMTSISKRHDVIEAVLNSNSNSVPEKMQAVAVLEKEVT 574 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 +++ + + R+ I A + R S E S + E+E++L I+ + Sbjct: 575 TSEIKDITEALNRVINISAKGFDEARHSS-EYSLDKVETESERQLVESIATLRKDFENYS 633 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++ SI I FF++ +V VD+ E+R NRL L+ + +IL Sbjct: 634 AEEKFAAFA----SITPKIHEFFNENMVMVDNEEIRTNRLRFLRELALMIL 680 >gi|302335666|ref|YP_003800873.1| glycyl-tRNA synthetase beta chain [Olsenella uli DSM 7084] gi|301319506|gb|ADK67993.1| glycyl-tRNA synthetase beta chain [Olsenella uli DSM 7084] Length = 698 Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 207/734 (28%), Positives = 335/734 (45%), Gaps = 80/734 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ EE+P+ A L+ + L + G+ + + + TP RL + + ++ Sbjct: 6 DFLLEVGCEEMPSAPLASAQAQLARLSASALTDAGLAHGAIECHSTPRRLSVLVHDVAMA 65 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E E R GP G KA GF R GL ++ D D A Sbjct: 66 TEEVHEVRRGPATGIAFDAEGRPTKAAQGFARKMGLGA-EQLVVRGDGDGKDYVFAETSI 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P R + +L I + WP +S RW + H+ +++RP++ I +L + Sbjct: 125 PSRPAQPILSAAAKRLIASLEWPNYRSQRWGSEHA-----TFVRPVRWICALL-----GD 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I + ++ N T GHR + + Y L A V+L+ E RR AIL Sbjct: 175 EVIPVSFADVTSSNATRGHRVLGAGEHAIANPSAYRETLRSAGVMLEDE-RREAILAGVA 233 Query: 234 RLASAVGLELVED-KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+ G V+ + +L+E++ L EW + +G FD+++L +P E+I ++ +NQ+ F Sbjct: 234 RIEEERGGAHVDTPRRVLDEVVNLCEWPTLLVGRFDEEFLAVPHEIICESMLSNQRYFPI 293 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L F++VSN + +V GN RVV ARL+DA F Sbjct: 294 YDASGALTREFVVVSNADPAVS-PTVVAGNERVVRARLDDAKFF---------------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVA- 409 ++ DL PLD + RLD V F ++GT ++V R+ L ++A+ +VA Sbjct: 337 ----YDEDLKVPLDDFVERLDR--VTFQERLGTMRQKVERMESLSAEVARGAGQGEEVAR 390 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L RA L+KADL ++ V EF QG +G YA E AI EH +PR + +P Sbjct: 391 LARRAAHLAKADLVSQAVVEFTNQQGVMGGYYAKAAGEPAEVASAIREHYRPRFAGDALP 450 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII-----------RIILE 518 + V++ADKLDT+ +AI+E P+GS DP+A RRA +GII R ++ Sbjct: 451 EGVVGKAVAIADKLDTICGMFAIDEPPTGSSDPFAQRRAAIGIIAMARAMPTLSLRPLIG 510 Query: 519 NKIDIPLSQFIE------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +D Q + + + LFF RL D + D IEA+ + + ++D Sbjct: 511 AALDAYARQGLAFDAGDVAEKVALFFAGRLATIARDDGVSPDTIEAV------SSVGVID 564 Query: 573 LIKHLNEFFSSAKG-EKFLLSAKRIFQILAIEEKKNREIS----LEISPQYLLLEAEKRL 627 +EF A + A +F LA + + + L+ +AE+ L Sbjct: 565 ----PDEFLHRAHALDGARADAPEVFDDLATAYARAAHLGDARLGTTVDEALMGQAEREL 620 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 ++++S+ + + L + EPI+ FFD VLV +D +R+NRL LL Sbjct: 621 LHACERGAGNVEKSLSMRDFDGACRALAELKEPIDHFFDDVLVMDEDTVLRENRLRLLNK 680 Query: 688 IKNIILIVINVQKI 701 ++ V ++ + Sbjct: 681 FASVFSGVADIGAL 694 >gi|311087031|gb|ADP67111.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 690 Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 212/699 (30%), Positives = 339/699 (48%), Gaps = 72/699 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 7 LIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDID---- 62 Query: 65 EKIEERL------GPRVGAGKKAIDGFLRSTGLQTISDC------QIKKDPKKGDVYLAV 112 I ER GP + DGFL + + C I+ +KG+ Sbjct: 63 --ITERFVEIKKRGPSIINSYDK-DGFLTEAATRWLKHCGININQAIRLKNEKGEWLFYK 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 RK + IE ++ I A++ + KSMRW + S RP+++I+ +L Sbjct: 120 TRKKQENIESLIPKITESALKNISIKKSMRWGQDNQKFS-----RPIRNIVILL-----D 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 +K+I D+ I N+ H IK++ Y + L E+ ++ D R+ I+ D Sbjct: 170 KKVIPGDIFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIED 229 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 230 IENIAKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFP 289 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 290 IYNSEKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDR---------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV Sbjct: 339 ----------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDS 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P Sbjct: 387 IRAALLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCT 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 447 PIGCGLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKK 506 Query: 531 ---------DQNLIL------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++LIL FF RL + + +I+++L ++ L+ I I+ Sbjct: 507 SLSLYNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQ 566 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F Sbjct: 567 AISFFKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFD 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 + + K+Y+ I + S PI FF +V + D Sbjct: 624 NYTKNLFLEKKYNDILIKIKSFENPIYNFFKKVKIYHSD 662 >gi|107023637|ref|YP_621964.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia AU 1054] gi|105893826|gb|ABF76991.1| glycyl-tRNA synthetase beta chain [Burkholderia cenocepacia AU 1054] Length = 699 Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 201/683 (29%), Positives = 333/683 (48%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGL----QTIS 95 +Y TP RL + ++ + +P+K + E++ P A GK + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPDKQVREKVLPVSVALDAEGKPTAPLAKKLAALGHPNASIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + +D K + + + D L+ + A+ K+P PK M + S + Sbjct: 112 DLERAQD-GKAEAFFINYSAAGATLADGLQAALDEALAKLPIPKFMTYQRPDG--SDVKF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++++ + + G+ T GHRF + + +Q Y L ++ Sbjct: 169 VRPVHRLTVL-----HDDRVVPVTAFGVDAGDTTLGHRFLSDGLVAIQHARAYADTLRDK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+ RR I + A+ G +V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVIAHFADRRETIRTQLNEHAN--GDTVVMPESLLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G I++GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDVAGKLRSRFLIVSNIETKTPGE-IIEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL R+ +L +VV+H K+G+ RV R+ Sbjct: 341 FFFEQDKK--------------------KPLADRVPQL--ANVVYHNKLGSALARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD A RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 ALAGEIAPAIGADTAHAKRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEADDVALA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFIEDQN---------------LILFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + + + FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVSLLHTAHARFAGVPGVAESTDAIFAFFMDRLRGLLRERGYSAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L + +V + + EF A+ E + KRI IL +K + + P L Sbjct: 559 LSLNPTRIDDLVARLDAVREFTRLAEAEALAAANKRISNIL---KKSEGGANGAVQPTLL 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L+ ++ H+Q ++ + Y L ++ P++ FF+ V+VN D +R Sbjct: 616 VEAAEKALHEQLAAVTPHVQSQLEARAYTGALSALAALRVPVDTFFNDVMVNAGDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|303233269|ref|ZP_07319941.1| glycine--tRNA ligase, beta subunit [Atopobium vaginae PB189-T1-4] gi|302480659|gb|EFL43747.1| glycine--tRNA ligase, beta subunit [Atopobium vaginae PB189-T1-4] Length = 701 Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 217/711 (30%), Positives = 341/711 (47%), Gaps = 82/711 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +F+LEI +EE+P+ A + L+ I+ LK G+ Y ++ + +P RL + + GL+ Sbjct: 10 EFVLEIGAEEMPSAPLICATKQLAQIMERELKACGLAYDSLEAHNSPRRLVVLVHGLAAA 69 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LR 114 + EK + GP V G KA GF R G + KK K G Y+ + Sbjct: 70 TQEKHTTKRGPAVSIAYDAQGNLTKAGLGFARKAG--ATPEQLSKKQDKDGKEYIWCDIF 127 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P D+L I+ I K+ WP +S RW T S++RP++ I C L+ +D Sbjct: 128 TPSLRAHDLLGDIITNCITKLEWPNYRSQRWGATTE-----SFVRPVRWI-CALLNDD-- 179 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I ++ N T GHR AP V S Y+ L +A V+L+ E RR IL+D Sbjct: 180 --VIPCTFADVTSSNYTLGHRVLAPGKHVVSSASAYLDVLHDAHVMLEDE-RRQRILDDV 236 Query: 233 HRLASA-VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A G+ + + +E++ L EW V +G FD ++L +P E+I ++ TNQ+ F Sbjct: 237 AAYEKAHPGMHVDMPRGTFDEVVNLTEWPHVVIGEFDHQFLAIPHEIICESMLTNQRYFP 296 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F++VSN + + ++ GN RVV ARL DA F+ D Sbjct: 297 IYDADGALTCFFVIVSNAK-PEMDTHVIDGNERVVRARLSDAQFFYTED----------- 344 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 LK L+ PL +R V F K+G+ ++ R+R L + IA+ + D AL Sbjct: 345 ---LKAPLESYVPLLKR--------VTFQEKLGSVFQKAVRMRDLAQTIAEACNFDAALT 393 Query: 412 D---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA L+KADL T+ V EF QG +G +A E+ AI+EH PR ++V Sbjct: 394 EHCARAAYLAKADLVTQTVVEFTSQQGVMGAYFAEACEEDPDVVAAIKEHYHPRFSGDSV 453 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE---------- 518 + VSLADKLDT+ +AIN+ P+GS DP+ALRR+ LG I I+ E Sbjct: 454 AQSTCGKVVSLADKLDTICGMFAINQPPTGSSDPFALRRSALGCIAILKELPRISLLSLI 513 Query: 519 ----NKIDIPLSQFIED---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + D+ + D + FF RL D I +++ AI + ++I+ Sbjct: 514 SSSLARYDMQGTSCDTDATIHEISQFFLGRLGSLAKDEHISPEVVMAI------SAISII 567 Query: 572 DLIKHLNEFFSSAKG-EKFLLSAKRIFQILAIEEKKN---REISLEISPQY-LLLEAEKR 626 D EFF+ A E+ +F+ LAI + RE +L + +L E++ Sbjct: 568 D----PQEFFARAHALEQVQQQQADVFEDLAIAYGRADHIREAALGTTVDVDMLAPTEQK 623 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 LY + ++++++ ++ Y L ++ PI+ FFD + V +D +V Sbjct: 624 LYNACLEGQDNVEKALSNRDYVVAASALAALRLPIDEFFDDIRVMDEDTKV 674 >gi|296125974|ref|YP_003633226.1| glycyl-tRNA synthetase, beta subunit [Brachyspira murdochii DSM 12563] gi|296017790|gb|ADG71027.1| glycyl-tRNA synthetase, beta subunit [Brachyspira murdochii DSM 12563] Length = 697 Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 200/742 (26%), Positives = 356/742 (47%), Gaps = 86/742 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI EEIPA + A+ I+ LK GV ++++ Y TP RL + + + Sbjct: 1 MKDLLIEILVEEIPADFAYPASISFKKIMEETLKSNGVNFKSVTAYTTPRRLSILAEDVE 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTG-----LQTISDCQIKKDPK----K 105 S +++ E GP + G KA +GFL+S ++ I + + P Sbjct: 61 EKSKDEVVEFRGPLFESALKDGVLTKAGEGFLKSHNIDAGLMKNIDENEAFNRPYIKEVN 120 Query: 106 GDVYLAVLRK-----PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLK 160 G YL V + K+L E+VL+ IV K+ + K MRW+ F+++RP++ Sbjct: 121 GKKYLFVKEEKKGVETKKLFEEVLEDIV----SKIDFKKKMRWADKD-----FAFVRPIR 171 Query: 161 SILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLD 220 ++L + E II + I N GHR +P ++ + Y + L E V++ Sbjct: 172 NVLALFGDE-----IIKTSVAGIETNNKITGHRLLSPEFTEIHNPKDYEKVLLEKHVVVS 226 Query: 221 PECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 E R I++ + G E V K + E ++ LVE + FD K+L +P+E++ Sbjct: 227 REKRLENIISQLENIEKEFGFEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLT 286 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 + +QK F ++G L N F++ +N + I+ GN RV+ ARL D ++ D Sbjct: 287 SEMIEHQKYFPLCKKDGSLTNVFVITANQPKT---PQIIAGNIRVLTARLSDGRFLYQED 343 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + K +D+ RL+ML +F ++G+ ++V R+ + + Sbjct: 344 --------------------IRKGMDEMNERLEML--MFRKELGSVADKVKRLEKNSELL 381 Query: 401 AQLI--DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 +L+ + D + +AI K+DL + +V FPELQG +G +A N N AI E Sbjct: 382 IKLLGYEKDKDNILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKAMNLNDDIALAINEQ 441 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +P + +P+N +++ DK+D + + + + P+GS+DP ALRR LGII I+++ Sbjct: 442 YRPLFAADEIPSNDTGKAIAILDKMDNIAAGFYVGDIPTGSQDPNALRRQALGIINILIK 501 Query: 519 NKIDIPLSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL 560 +K + L + IED +++ FF R + +D D D + +L Sbjct: 502 SKKHVNLKKLIEDAINSMPKDARNNKSEDLIKDIFEFFKSRFE---NDIDFAKDSVAGVL 558 Query: 561 RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 D++ I+ ++EF K E + +F+ + K ++++L+ L Sbjct: 559 STGIDDMYDAYLKIEAIDEF--RKKNEALFSNLLTVFKRIKNMIKSAKDVNLD--EALLK 614 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 EAEK LY + + + M+++ Y + LL S+ EP++ FF ++VNV+D ++++N Sbjct: 615 EEAEKSLYNTYKEKLNEVNKLMENREYEKTFSLLASLYEPLDKFFKDIMVNVEDEKIKNN 674 Query: 681 RLSLLQYIKNIILIVINVQKIV 702 R++LL + I +++ +V Sbjct: 675 RIALLSSVDKIFKNMLDFSSLV 696 >gi|302343407|ref|YP_003807936.1| glycyl-tRNA synthetase, subunit beta [Desulfarculus baarsii DSM 2075] gi|301640020|gb|ADK85342.1| glycyl-tRNA synthetase, beta subunit [Desulfarculus baarsii DSM 2075] Length = 695 Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 210/723 (29%), Positives = 336/723 (46%), Gaps = 70/723 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ----NMRQYWTPHRLFLYL 56 M + L EI EE+PAR E ++ + +L EG+ ++ + P RL L+ Sbjct: 1 MAELLFEIGCEEMPARFVAPGIEQMAALGAEMLVREGLCASPDAAQVKAFGAPRRLALWA 60 Query: 57 KGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTG--LQTISDCQIKKDPKKGD 107 + L+ P++ E+ LGP + G KA GF +S G L +++ K P+ G Sbjct: 61 RNLAAIQPDRQEQVLGPPKANAYDQNGEPTKAALGFAKSQGVELTSLTFIDTDKGPRLGY 120 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V R ++ ++L +V + + + KSMRW + F + RP+ + + Sbjct: 121 VKTIAGRPAMAVLPELLVKLV----ESLHFAKSMRWGSEK-----FRFARPIHWFVALF- 170 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 +++ L++ + G+ T GHRF AP I+V+ + Y+ L +A VL+D R A Sbjct: 171 ----DGQVVPLEITGVKSGDQTRGHRFMAPQAIQVRGGEDYLTKLRQAHVLVDRPERIEA 226 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 + A+ G L+ D+ LL E LVE GSFDK++L +P E++ ++ +Q Sbjct: 227 TRQQVAQAAAQAGGRLLADEALLLENADLVEQPTACWGSFDKQFLEVPREVVITAMREHQ 286 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + +G L FI V+N D A + G+ RV+ ARL DA F D+ Sbjct: 287 RYHSLEDDQGRLLPAFIAVNNTTPRDL-AVVANGHQRVLRARLADARFFLDEDRK----- 340 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 +PL + D+ +V +HAK+G+ ++V R+ L +AQ + + Sbjct: 341 ---------------RPLADYLG--DLQNVTYHAKLGSSFDKVQRVIDLAVWLAQRLAPE 383 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V RA L+K DL T +V EFP LQG IG EYA E+ AI EH +P G Sbjct: 384 LVEPTRRAAQLAKCDLVTGMVGEFPSLQGVIGAEYARRDGEDPQVATAIAEHYQPVGADA 443 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P I V LAD++DT+ + + E P+G+ DPYALRRA + ++R+++E + I LS Sbjct: 444 PLPKGMIGALVGLADRIDTICGLFGVGEAPTGAADPYALRRAAIAVLRLLMEKNLTISLS 503 Query: 527 QFI-------------EDQN----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 Q + DQ + FF RL + + D+ +A+L D+ Sbjct: 504 QTLAQALAGLAGRLSAADQTVADEVTKFFAARLAGLMAEAGAPTDVAQAVLAAGLDDPGA 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + K L S KR+ IL +++ + S P + +EAE++L Sbjct: 564 AMARAKALAAVKDSPDFAPLAAGMKRVMNIL--KKEAAQVPSHAPDPALMTIEAERQLRQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + Q Y Q L + PI+ FFD VLV +D+ VR NRL+LL+ + Sbjct: 622 AVLAVADEAQALFASGDYAQFLRRLSELKGPIDAFFDGVLVMDNDQAVRQNRLALLESVA 681 Query: 690 NII 692 + Sbjct: 682 RLF 684 >gi|257784497|ref|YP_003179714.1| glycyl-tRNA synthetase, beta subunit [Atopobium parvulum DSM 20469] gi|257473004|gb|ACV51123.1| glycyl-tRNA synthetase, beta subunit [Atopobium parvulum DSM 20469] Length = 695 Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 220/731 (30%), Positives = 346/731 (47%), Gaps = 83/731 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI SEE+P+ KA + +++ LK+ G+ + ++ TP RL Y+K ++ Sbjct: 6 DFLFEIGSEEMPSAPLQKAIAQFNKLVVSGLKDSGLSFGEVKILSTPRRLTAYVKDVAEA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL-AVLR 114 + E E + GP+ G KA +GF R G+ ++ ++ G Y+ A L Sbjct: 66 TEEISEVKRGPKAEIAFDAEGNPTKAAEGFARKCGVN--ANALTRRVDTDGHEYVFAELN 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P +L + I + WP+S RW + H ++RP++ LC+L + Sbjct: 124 IPSVPATKILSELATSWISALDWPRSQRWGSFHE-----RYVRPVR-WLCVLFGSE---- 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + ++ N T GHR P +V S Y + L++A VLL E R++ IL Sbjct: 174 IVPVTYADVTSSNTTQGHRVLGPGCHEVASPADYEQVLKDAGVLLQ-EQRKDVILAGIKE 232 Query: 235 LASA-VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + +A G + + + EE+I L EW QV +G+FDK++L +P E+I ++ +NQ+ F Sbjct: 233 VEAARPGSHVDMPEKVFEEVINLTEWPQVLVGTFDKEFLNVPSEIITESMLSNQRYFPIY 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI+VSN + ++ GN RVV ARL+DA F Sbjct: 293 DAEGKLTREFIVVSNADPT-CAERVIDGNERVVRARLDDAKFF----------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVAL 410 F DL LD+ RL+ VVF K+GT ++ R+ L +IA L Sbjct: 335 ---FEEDLKHSLDEFAQRLET--VVFQEKLGTVLQKTQRMEALAAEIALDETSSKEKAEL 389 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL ++ V EF QG +G YA E AI EH +PR + +P+ Sbjct: 390 AARAAHLAKADLVSQAVVEFTSQQGVMGGYYAEAAGEKSDVVAAIREHYRPRFAGDELPS 449 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +I V++ADKLDT+ +AINE P+GS DPYA+RRA +G+I ++ ++ L + I Sbjct: 450 GQIGRFVAIADKLDTICGIFAINEPPTGSSDPYAVRRAAIGVIALVRSTS-NLNLKKLIA 508 Query: 531 D-------QNLIL----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 Q L++ +F RL D I D IEA+ + + ++D Sbjct: 509 SSLELYRQQGLVVDESVQSQIEQYFIGRLASIAKDEKISADAIEAV------SAIGVID- 561 Query: 574 IKHLNEFFSSAKG-EKFLLSAKRIFQILAIEEKKNREIS-----LEISPQYLLLEAEKRL 627 +EF A+ ++ + +F+ LA + +S E+ LL E E + Sbjct: 562 ---PDEFLLRARALDEARQNEPELFEDLATAYARAAHLSDTSLGTEVDTA-LLTEPELSV 617 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 A + + ++ Y L + EPI+IFFD+VLV ++ VR NRL LL Sbjct: 618 LAACEEGQKQVASALAGADYAAAVSALSQLREPIDIFFDKVLVMDENDTVRRNRLRLLNK 677 Query: 688 IKNIILIVINV 698 + V ++ Sbjct: 678 FSQVFSNVADI 688 >gi|58617676|ref|YP_196875.1| glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Gardel] gi|58417288|emb|CAI28401.1| Glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Gardel] Length = 710 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 211/742 (28%), Positives = 368/742 (49%), Gaps = 86/742 (11%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEE+PA MQ A + + L + + + +++ + T +R+ + + + Sbjct: 9 MPLELLFECLSEEVPAEMQSSAYFYVDSYIKKELNKNNISFSSVKVFVTSNRISVCVSDI 68 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISD---CQIKKDPKKGDVYLA-VLRK 115 +S + + GPRV + K AIDGFL+ G + +D C++ D D Y A + K Sbjct: 69 INNSLKNAPKVKGPRVSSDKSAIDGFLKKIG-KNFNDLIICKVGND----DFYYADISNK 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + LIE VL +I+ + PW K MRW + WIRP+ ++LCIL K+ Sbjct: 124 NETLIETVLSSIIENMLHNFPWNKKMRWGNGKT-----YWIRPILNLLCILDG-----KV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + +I N + G+++ +V++ D Y+ L+ + V+L E R N I N L Sbjct: 174 LPVKFADIEANNKSRGNKYTHKEFFEVKNFDSYVSQLQTSNVILCQEERLNFIFNQIRNL 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A L + L+ E+ G++E+ V MG DK++ LP+ELI + QK T Sbjct: 234 TEANNLVCENNIKLINELNGILEYPLVIMGHVDKQFSELPKELILSVMHNYQKYLAVFTS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + + FI +S+I +I+QG++ V+ ARL DA K+D KE ++ Sbjct: 294 DKITN--FITISSI----SNDSILQGHNNVLNARLVDASFLIKKD----------KEYSI 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRA 414 + ++ K +VFHAK+G+ E+V+RI L K I+ I + + V+RA Sbjct: 338 DYYIEKLK------------HIVFHAKLGSIFEKVNRIVALSKYISMWIPHSSLIKVERA 385 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL T V+EFPELQG +G YA E ++I + +P + P++ I+ Sbjct: 386 AELSKFDLATLAVKEFPELQGIMGGYYASHFGEISEISESIVSYYEPTNSSKKTPSSPIA 445 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII------------RIILENKID 522 IT+S++DKLDTL+ E+ +GS+DP+++RR + II R+++E + Sbjct: 446 ITLSISDKLDTLVGMVVAGEQVTGSRDPFSMRRMAISIIRVIIENNINIPIRLLIEKSVS 505 Query: 523 IPLSQFIEDQNL--------------------ILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + ++ +E + + + F +R K+ L D IR D+I A+L Sbjct: 506 LYSNRLVERKTIRKIKDVISRTNKKKSIVSYVLEFCSNRFKIMLKDYGIREDVIRAVLDN 565 Query: 563 EN--DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 + +NLL I LN + + G++ + + KR+ I++ + N I + + + Sbjct: 566 DKKFNNLLMIKKEAIVLNSYIDTENGKEIIKAYKRLHNIISKDNVINSII--KCNKKLFS 623 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVN-VDDREVRD 679 E LY ++I++ + +K++++ D L+++ + F D + VN + ++ + Sbjct: 624 TNEEINLYKETIYQKSNIKKLLKNKKFNESLDNLYNLSCYVNNFMDNIKVNDITNKALYK 683 Query: 680 NRLSLLQYIKNIILIVINVQKI 701 NRLSL++ I +V + KI Sbjct: 684 NRLSLIKTTFYIFNLVTDFNKI 705 >gi|237746627|ref|ZP_04577107.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes HOxBLS] gi|229377978|gb|EEO28069.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes HOxBLS] Length = 694 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 200/703 (28%), Positives = 341/703 (48%), Gaps = 74/703 (10%) Query: 37 GVIYQNMRQ------------YWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GK 79 G I +++RQ Y TP RL + + + SP+K I +++ P A GK Sbjct: 28 GTIEKSLRQDDFLTDASKKTVYATPRRLAITITNVRDVSPDKPIRQKVLPVSVALDADGK 87 Query: 80 KAIDGFLRSTGLQT----ISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKV 135 + L IS ++ +D K ++ L L+ V A ++ Sbjct: 88 PTAPLKKKLAALNIPDIDISTLEVARDGKNDCLFYNYTASGIPLAAS-LQKAVEKAAHEL 146 Query: 136 PWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFH 195 P PK M + F +RP+ I+ + E ++ + L + G T+GHRF Sbjct: 147 PVPKMMTYQRPDGETVEF--VRPVHEIVAM-----HGENVVPIALLGLSAGRTTHGHRFL 199 Query: 196 APHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEII 254 + I + + D+Y LE ++ + R++ I A + A G +++ + LL+E+ Sbjct: 200 SQGEIGILAADYYAVTLETRGKIIPGFQARKDRI--RAMLIEKAKGDKVLMPESLLDEVT 257 Query: 255 GLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDG 314 LVEW V+ F++ +L +P+E + LT++TNQK F EG L + F++VSN++ ++ Sbjct: 258 ALVEWPIVYECHFEESFLEVPQECLILTMQTNQKYFALTDAEGRLRSRFLIVSNME-TNT 316 Query: 315 GAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDM 374 I+ GN RV+ RL DA F+++D+ K L++R+ L Sbjct: 317 PQRIISGNERVIRPRLSDARFFFEQDKK--------------------KRLEERLPGL-- 354 Query: 375 LDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQ 434 +VV+H K+GT +R++R+R+L IA + D LVDRA L KADL TE+V EFPELQ Sbjct: 355 ANVVYHNKLGTLAQRMARVRLLAVFIAGKMGIDTQLVDRAARLVKADLLTEMVGEFPELQ 414 Query: 435 GKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINE 494 G +G YA E+ A EH +PR + +P ++LADKL+TL W I Sbjct: 415 GIMGTYYARHDGEHEEVALACTEHYQPRFAGDVLPATPTGTAIALADKLETLAGIWGIGL 474 Query: 495 KPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILFFH 539 +P+G +DP+ALRR LGI+RI++E K+ + L + + + + ++ F Sbjct: 475 QPTGDRDPFALRRHALGILRILIEKKLPLSLRKMLAEAVGILSTNATMTDPTEGVLAFVM 534 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +RL+ L DR I+A+L D ++D ++ + F + + + KRI I Sbjct: 535 ERLRGLLRDRGYSPAEIDAVLAQNPDRFDNLIDRLEAVRAFAAMPESVSLAAANKRITNI 594 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 L KK+ + ++ L ++EK+L+A ++ Y L + + Sbjct: 595 L----KKSDINAGDVHTDILAEDSEKKLFADMTVVKPEADRKFAAGDYTGTLKTLAQLRD 650 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ FF V+V DD +R+NR++LL+ + ++ V ++ K+ Sbjct: 651 DVDAFFTNVMVMTDDTRLRNNRIALLKQLHAMMNQVADISKLA 693 >gi|119487891|ref|ZP_01621388.1| glycyl-tRNA synthetase beta subunit [Lyngbya sp. PCC 8106] gi|119455467|gb|EAW36605.1| glycyl-tRNA synthetase beta subunit [Lyngbya sp. PCC 8106] Length = 717 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 200/731 (27%), Positives = 342/731 (46%), Gaps = 93/731 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA +A + ++ L+E+ + +++ Y TP RL + ++GL Sbjct: 1 MPSFLLEVGTEELPAPFVEQALQQWRRLIPTTLEEQFLQSESIDVYGTPRRLAVVIRGLP 60 Query: 61 PHSPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP A KA GF + G++ + + +I+ +KGD + Sbjct: 61 QQQADRDEEIKGPPASAAFKNDQPTKAAVGFAKKQGVE-LDELEIRPT-EKGDFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R D+L ++P I K+ + MRW + RP++ ++ +L +K Sbjct: 119 IAGRPTADILTELIPQWITKLEGKRFMRWGDGE-----LKFPRPIRWLVVLL-----DDK 168 Query: 175 IIDLDL----KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+ + L ++ I+ GHR P I++ + Y+ L + + +DPE R+ I Sbjct: 169 ILPVTLVSGSDKVESNRISQGHRVLHPEAIEISTATDYLDSLRQGFIEVDPEQRKTTIEA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + + ++G +LL E+I LVEW +G F+ ++L LP E+I+ + T+Q+ F Sbjct: 229 EIKTASKSIGGNAEIPDELLAEVINLVEWPTAVVGKFEDEFLNLPPEVIKTVMVTHQRYF 288 Query: 291 ----VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ + L + FI +SN + I GN RV+ ARL D F+K D Sbjct: 289 PVLETAKSVQSPLKSYFITISNGDPAKSNI-IAAGNERVIRARLADGQFFYKSD------ 341 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID- 405 L +PL+ + L+ V F K+G+ ++V+RI + I+Q + Sbjct: 342 --------------LKQPLEAYLPNLET--VTFQEKLGSVRDKVNRIGQVADLISQQLQV 385 Query: 406 --ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + + R+ +L KADL T++V EFPELQG +G++YA E + AI EH PRG Sbjct: 386 SPTEHTQIQRSALLCKADLVTQMVYEFPELQGIMGEKYARECGEPDAVATAIFEHYLPRG 445 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +++P + V LAD+LDTL++ + + PSGS DP+ALRRA ++ I E + I Sbjct: 446 ATDSLPQTLVGQVVGLADRLDTLVSIFGLGMIPSGSSDPFALRRAANAVVNITWEANLTI 505 Query: 524 PLSQFIED-----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEND 565 L Q +E L FF R++ L D ++I +DL+ A+L E+D Sbjct: 506 NLHQLLEQLVAEFTRNYDKVIPDLLSQLYEFFLQRIRTLLQDEKNIDYDLVNAVLG-EDD 564 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE------------ 613 T + L + + FL + ++ + I E NR L Sbjct: 565 PEYT----ERALKDLLDVRERATFLQTIRQDSSLDQIYETVNRSTRLAKQGDLDTVQLQP 620 Query: 614 ---ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---Q 667 ++P+ +E++ Y + + + + Y Q+ D L I + FFD Sbjct: 621 KKLVNPKLFAKSSEEQFYQALIALVPKTEAAQKTRNYRQLVDALAEIAPTVSTFFDGPES 680 Query: 668 VLVNVDDREVR 678 VLV ++ E++ Sbjct: 681 VLVMDENPEIQ 691 >gi|294784336|ref|ZP_06749627.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_27] gi|294487908|gb|EFG35263.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_27] Length = 686 Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 201/726 (27%), Positives = 355/726 (48%), Gaps = 87/726 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKTNFERKLKNNRIKFSGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + G KA +GFL++ ++ IK D KG+ Y+A R Sbjct: 62 QEDLDELSIGPSRERAYKNGVLTKAGEGFLKAHRIEEEQIEIIKND--KGE-YIAFKRFS 118 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E +L I+ + + +PKSMRWS + RP++ L + +K+ Sbjct: 119 KGKPTETILPEILKALVLEETFPKSMRWSD-----KTIRFARPIEWFLALY-----GDKV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D +++ I N + GHRF +V S++ Y++ + E V++D RR I Sbjct: 169 VDFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMI------- 220 Query: 236 ASAVGLELVEDKD------LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + L+ED+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ Sbjct: 221 EEMINNSLLEDEKADVDEALLDEVTNLVEHPFAIVGNFSEDFLEVPQEVLIISMKVHQRY 280 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 281 FPVLSKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED--------- 329 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L PLD + +L VVF +GT ++V R + + + + + + Sbjct: 330 -----------LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYM 376 Query: 410 LVD--RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR Sbjct: 377 KEDILRTVKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIKEHYYPRFQG 436 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II++ +DI L Sbjct: 437 DLLPSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIIKANLDISL 496 Query: 526 SQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 ++ + +++ F R+ D R D+I ++L + DN Sbjct: 497 KDLVKVSLDALEADKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADN 556 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + +++++ + E S K + L + KR+F I+ K +++++ I + + EK Sbjct: 557 ITNALEIVRVITEKLSKDKMQALLQTVKRVFNIM----KGSKDVT--IKEKLFKNDIEKT 610 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY +++++ K Y + L ++ I+ +FD V+V +D+ VRDNR+ L Sbjct: 611 LYTESKKVEEEVEKAIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRIGQLT 670 Query: 687 YIKNII 692 I N+ Sbjct: 671 CIMNLF 676 >gi|254247265|ref|ZP_04940586.1| Glycyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia PC184] gi|124872041|gb|EAY63757.1| Glycyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia PC184] Length = 699 Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 201/683 (29%), Positives = 334/683 (48%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGL----QTIS 95 +Y TP RL + ++ + +P+K + E++ P A GK + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPDKQVREKVLPVSVALDAEGKPTAPLAKKLAALGHPNASIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + +D K + + + D L+ + A+ K+P PK M + S + Sbjct: 112 DLERAQD-GKAEAFFINYSAAGATLADGLQAALDEALAKLPIPKFMTYQRPDG--SDVKF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++++ + + G+ T GHRF + + +Q Y L ++ Sbjct: 169 VRPVHRLTVL-----HDDRVVPVTAFGVDAGDTTLGHRFLSDGLVAIQHARAYADTLRDK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+ RR I + A+ G +V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVIAHFADRRETIRTQLNEHAN--GDTVVMPESLLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G I++GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDVAGKLRSRFLIVSNIETKTPGE-IIEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL R+ +L +VV+H K+G+ RV R+ Sbjct: 341 FFFEQDKK--------------------KPLADRVPQL--ANVVYHNKLGSALARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD A RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 ALAGEIAPAIGADTAHAKRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEADDVALA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFIEDQN---------------LILFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + + + FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVSLLRTAHARFAGVPGVAESTDAIFAFFMDRLRGLLRERGYSAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L + +V + + EF A+ E + KRI IL +K + + P L Sbjct: 559 LSLNPTRIDDLVARLDAVREFTRLAEAEALAAANKRISNIL---KKSEGGANGAVQPTLL 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L+ ++ H+Q ++ + Y L ++ P++ FF+ V+VN +D +R Sbjct: 616 VEAAEKALHEQLAAVTPHVQSQLEARAYTGALSALAALRAPVDTFFNDVMVNAEDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|170734064|ref|YP_001766011.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia MC0-3] gi|169817306|gb|ACA91889.1| glycyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia MC0-3] Length = 699 Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 201/683 (29%), Positives = 334/683 (48%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGL----QTIS 95 +Y TP RL + ++ + +P+K + E++ P A GK + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPDKQVREKVLPVSVALDAEGKPTAPLAKKLAALGHPNASIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + +D K + + + D L+ + A+ K+P PK M + S + Sbjct: 112 DLERAQD-GKAEAFFINYSAAGATLADGLQAALDEALAKLPIPKFMTYQRPDG--SDVKF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++++ + + G+ T GHRF + + +Q Y L ++ Sbjct: 169 VRPVHRLTVL-----HDDRVVPVTAFGVDAGDTTLGHRFLSDGLVAIQHARAYADTLRDK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+ RR I + A+ G +V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVIAHFADRRETIRTQLNEHAN--GDTVVMPESLLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G I++GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDVAGKLRSRFLIVSNIETKTPGE-IIEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL R+ +L +VV+H K+G+ RV R+ Sbjct: 341 FFFEQDKK--------------------KPLADRVPQL--ANVVYHNKLGSALARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I AD A RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 ALAGEIAPAIGADTAHAKRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEADDVALA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFIEDQN---------------LILFFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + + + FF DRL+ L +R I+A+ Sbjct: 499 LLLEKQLPLDLVSLLRTAHARFAGVPGVAESTDAIFAFFMDRLRGLLRERGYSAGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L + +V + + EF A+ E + KRI IL +K + + P L Sbjct: 559 LSLNPTRIDDLVARLDAVREFTRLAEAEALAAANKRISNIL---KKSEGGANGAVEPTLL 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L+ ++ H+Q ++ + Y L ++ P++ FF+ V+VN +D +R Sbjct: 616 VEAAEKALHEQLAAVTPHVQSQLEARAYTGALSALAALRAPVDTFFNDVMVNAEDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLSALHQQMNCVADISKLA 698 >gi|212711578|ref|ZP_03319706.1| hypothetical protein PROVALCAL_02653 [Providencia alcalifaciens DSM 30120] gi|212685680|gb|EEB45208.1| hypothetical protein PROVALCAL_02653 [Providencia alcalifaciens DSM 30120] Length = 689 Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 195/723 (26%), Positives = 336/723 (46%), Gaps = 71/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L + + + + P RL L ++ L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDSADITHGAVNWFAAPRRLALKVESLAAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 66 PDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAQMK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L +V ++ K+P PK MRW+ + ++RP+ ++ +L ++ I+ Sbjct: 124 GQPVSELLIDMVSRSLAKLPIPKLMRWADKDT-----QFVRPVHTVTLLLGSD-----IV 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRL 235 + ++ I I GHRF + + + Y L V+ D R+ I+ +A + Sbjct: 174 NGEILGIKSDRIIRGHRFMGEAEFTIDNAEQYPEILRTRGKVIADYAERKAIIIANAEKA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+G + L+EE+ LVEW V F+ K+L +P E + T+K +QK F Sbjct: 234 AKALGGKADLTDSLVEEVTSLVEWPVVLTAKFEDKFLEVPAEALVYTMKGDQKYFPVYDD 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLPNLSSL 350 G L FI V+NI++SD I+ GN +VV RL DA F+K D ++NLP L + Sbjct: 294 AGKLMPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLET- 351 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 V+F ++GT ++ R+ L IA I ADV Sbjct: 352 --------------------------VLFQQQLGTLRDKTDRLEALAGWIASKIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ Sbjct: 386 ATRAGLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + + Sbjct: 446 TDVSAALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTQ 505 Query: 531 D---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++++ F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLTNKNVVEDVVEFMLGRFRSWYQELGYSIDTIQAVLARRPTQPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F S + + + KR+ IL+ E+K ++ + L E +L + Sbjct: 566 AVTHFRSLEEAQTLAAANKRVSNILSKSEEK---LADSVLASVLKTPEEVKLATHVVVLQ 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + Y + L S+ E ++ FF V+V +D VR NRL+LL ++ + L V Sbjct: 623 DKLAPMFAERNYQEALVELASLREVVDEFFANVMVMDEDPAVRINRLTLLSQLRELFLKV 682 Query: 696 INV 698 ++ Sbjct: 683 ADI 685 >gi|299139033|ref|ZP_07032210.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8] gi|298599187|gb|EFI55348.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8] Length = 698 Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 190/669 (28%), Positives = 320/669 (47%), Gaps = 62/669 (9%) Query: 43 MRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISD 96 +R Y TP RL + + G+ + E+ GP V G A + F R +G+ +++ Sbjct: 46 IRSYSTPRRLAVLVCGVREQQADITEDVTGPAVKIAFKDGVATPAAEAFARKSGV-AVAE 104 Query: 97 CQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWI 156 + PK G+ A K R +VL + +P I + W K+M W P ++ Sbjct: 105 LRTITTPK-GEYLAATSVKKGRSAAEVLASELPKEIAGIYWAKNMYWR----PGKPERFV 159 Query: 157 RPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHR-FHAPHPIKVQSLDHYIRDLEEA 215 RP+ I+C+L + ++ L G +YGHR + P ++ + + Y+ LE Sbjct: 160 RPVLWIVCLL-----GDAVVPLTFAGRMAGRASYGHRVLSSGEPFEIVAPESYLAQLEGE 214 Query: 216 MVLLDPECRRNAILNDAHRLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+ D E RR I + AV G ED++L++ + L EW V +G F+ YL L Sbjct: 215 YVIADVEARRQTIRKALDHVTRAVEGARWREDEELVDSVTHLTEWPAVLLGGFESAYLEL 274 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIV-QGNSRVVAARLEDA 333 PEE++ ++ +QK F G LA F+ + NI + I+ QGN RV+ AR DA Sbjct: 275 PEEVLVTVMRDHQKYFAVEDAAGKLAPHFLAILNIALDETNEPIIKQGNERVLRARFNDA 334 Query: 334 LHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI 393 FW+ DQ PL +R+ L+ +V F +G+ + R+ Sbjct: 335 RFFWEFDQRT--------------------PLAERVKLLE--NVTFQKDLGSYAAKSERV 372 Query: 394 RVLGKKIAQLIDA-----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN 448 R L ++A++ + D + VD A L+K DL TE+V+EF ELQG IG YA Q + Sbjct: 373 RSLAAQLAKVASSRGATVDASAVDEAAKLAKTDLTTELVKEFTELQGVIGGLYAKAQGVS 432 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRA 508 + DAI + P + +P + + LAD++DT+ +A+ +P+GSKDP+ALRRA Sbjct: 433 ATVADAIYDQYLPASAKDAIPRSFEGALLGLADRIDTITGMFALGMEPTGSKDPFALRRA 492 Query: 509 TLGIIRIILENKIDIPLSQFIE--------DQNLILFFHDRLKLYLHD-RDIRHDLIEAI 559 ++RI+ E+ + + L+ L FF +R++ YL + R +D+++A+ Sbjct: 493 ANSVVRILAESGLPLTLADVFGVAQSEAEVAAKLQAFFAERIEFYLREGRGQAYDVVKAV 552 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFL-LSA--KRIFQILAIEEKKNREISLEISP 616 + ++L D + + GE F+ +SA KR+ IL + K I + Sbjct: 553 VAAGAEDLR---DAVARAEAVTAVRGGEDFIAVSAAFKRMKNILDQAQAKGESIPASVDT 609 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 L +EK L + + ++ ++Y + + S+ + FF++V+V + + Sbjct: 610 GLLSDASEKALESTGGRVASDVEALRAKRQYSEALTQVASLRPVVNEFFERVMVMAPEAD 669 Query: 677 VRDNRLSLL 685 +R NRL+LL Sbjct: 670 IRANRLALL 678 >gi|332638278|ref|ZP_08417141.1| glycyl-tRNA synthetase subunit beta [Weissella cibaria KACC 11862] Length = 694 Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 210/738 (28%), Positives = 342/738 (46%), Gaps = 95/738 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI EE+PA + A L + +E + Y ++ + TP RL + + ++ Sbjct: 1 MANFLLEIGLEEVPAHLVTPAINQLVERAENFMADERLAYGAIKPFSTPRRLAVLISDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + EE GP G KA GF+R GL T D K+ +Y+ Sbjct: 61 EKAEDFQEEVKGPAKKVALDAEGNYSKAAQGFVRGQGL-TTDDITFKEFNGNEYIYVTKF 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K E VL V I+ + + +M+W H+ F ++RP++ ++ +L + Sbjct: 120 EAGKPAAE-VLTGFKQV-IEAMTFSTTMKWGR-HT----FEYVRPIRWMVALL-----DD 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ D+ + G + GHRF H +++ S D Y L V D E R+ I Sbjct: 168 EVVPFDILGVATGRSSRGHRFLG-HDVEIASADQYEEALTSVFVQADAEARKQNIRTQVE 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +AS +V D+DLLEE+ +VE+ F G FD+ YL +P+E++ ++K +Q+ F Sbjct: 227 TIASDNNWTVVVDEDLLEEVNNIVEYPTAFAGGFDEGYLEVPDEVLITSMKEHQRFFHVV 286 Query: 294 TREGVLANCFILVSNIQAS--DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V N A D ++ GN +V+ ARLEDA F+ DQ + + + K Sbjct: 287 DANGALLPHFISVRNGNAEHIDN---VIAGNEKVLVARLEDAKFFYHEDQKHDIDFYNYK 343 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVV-FHAKIGTQGERVSRIRVLGKKIA---QLIDAD 407 L+VV FHAK+G+ R + L IA D Sbjct: 344 -----------------------LEVVSFHAKLGSVAAHTRRAKALAAIIAGRLAFTDDQ 380 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA + K DL T +V EF ELQG +G++YA L E+ + AI EH P Sbjct: 381 QAKLARAGEIYKFDLMTGMVGEFDELQGIMGEKYANLFGEDAAVAQAIREHYMPISADGE 440 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK----IDI 523 +P + + ++LADKLD+L++F+A PSGS DPYALRRA G++ I+ +NK ID Sbjct: 441 LPASDLGKVLALADKLDSLLSFFAGGMVPSGSNDPYALRRAASGVVNILADNKWDLDIDG 500 Query: 524 PLSQFIEDQN----------------------LILFFHDRLKLYLHDRDIRHDLIEAILR 561 LS I D N ++ F DR+ L D +R D+I A+ + Sbjct: 501 ILSDLIADINADAVKFGLPEEVMAELQNNVAAVVNFLTDRVVKALQDEGVRRDIINAVTK 560 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 +N + + + F + + +++ + K + +++++ L Sbjct: 561 ---NNFADTTQMFESAQVLAAHVNDANFREGVEALTRVMRLTTKNATDATVDVA----LF 613 Query: 622 E--AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 E AEK L+ ++ T + D K + LL+ + + +F++ +V V+D V++ Sbjct: 614 ENAAEKALFEAVAPVAT--VDGTDAK----LAALLN-LQPAVAAYFEETMVMVEDEAVKN 666 Query: 680 NRLSLLQYIKNIILIVIN 697 NRL+ L + + V N Sbjct: 667 NRLATLHAVADEATKVAN 684 >gi|254522505|ref|ZP_05134560.1| glycyl-tRNA synthetase, beta subunit [Stenotrophomonas sp. SKA14] gi|219720096|gb|EED38621.1| glycyl-tRNA synthetase, beta subunit [Stenotrophomonas sp. SKA14] Length = 691 Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 200/708 (28%), Positives = 332/708 (46%), Gaps = 61/708 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + R TP RL + L G+ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVVDGLRKRGVALDLGDARPLSTPRRLAVLLPGVGL 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 PE+ E LGP + G KA+ GF G++ K KG+ ++ Sbjct: 67 EQPEQHSEVLGPYLNIALDAEGQPTKALQGFAAKAGIEWT--ALEKTTDNKGERFVHRAV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P +L I+ AI +P PK MRW A+ + RP ++ + + Sbjct: 125 TPGASTASLLPEILREAIAAMPIPKPMRWGD-----HAWGFARPAHWLVLL-----HGDN 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +L + G ++ GHRFH + + Y+ L A VL+DP RR I+ + Sbjct: 175 VVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVLVDPSERRARIVAEVEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ G +D LE+++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 AAAKAGGSARITEDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI++ D A + +G RV+ R DA F+ D L+S+ E Sbjct: 295 DSGTLTEKFIGIANIESKDV-AEVAKGYERVIRPRFADAKFFFDEDLKQ--GLASMGEG- 350 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + V + AK+G+ ++V+R+ L + IA + AD A RA Sbjct: 351 -------------------LKTVTYQAKLGSVADKVARVAALAEVIAPQVGADAAQAKRA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL + +V EFPELQG G+ YAV E++ AI+E +PR +++ + + Sbjct: 392 AELAKNDLQSRMVNEFPELQGIAGRHYAVAGGESVDVALAIDEAYQPRFGGDDIALSALG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +++A+++DTL +A KP+G+KDP+ALRR LG+ R I+E+ ++ L + N Sbjct: 452 KVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRALLASANA 511 Query: 535 IL--------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 L F DRLK Y D+ + A+ + +L + + F Sbjct: 512 GLAARNVQADVGELYDFILDRLKGYYADKGVPATHFNAVAELKPASLYDFDRRLDAIGTF 571 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KRI IL K +I +I L +AE+ L ++ Sbjct: 572 AALPEAEALAAANKRIRNIL---RKAEGDIPAQIDTALLQEDAERALAEAVTAAIDDTGA 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 S+ HK Y + L + ++ FFD V+VN +D +R NRL+LL + Sbjct: 629 SLQHKDYVAVLARLARLRPQVDAFFDGVMVNAEDPALRGNRLALLTML 676 >gi|57238742|ref|YP_179878.1| glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] gi|57160821|emb|CAH57719.1| glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 702 Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 210/757 (27%), Positives = 366/757 (48%), Gaps = 116/757 (15%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEE+PA MQ A + + L + + + +++ + T +R+ + + + Sbjct: 1 MPLELLFECLSEEVPAEMQSSAYFYVDSYIKKELNKNNISFSSVKVFVTSNRISVCVSDI 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISD---CQIKKDPKKGDVYLA-VLRK 115 +S + + GPRV + K A+DGFL+ G + +D C++ D D Y A + K Sbjct: 61 INNSLKNAQRVKGPRVSSDKSAVDGFLKKVG-KNFNDLIICKVGND----DFYYADISNK 115 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + LIE VL +I+ + PW K MRW + WIRP+ ++LCIL K+ Sbjct: 116 NETLIETVLSSIIENMLHNFPWNKKMRWGNGKT-----YWIRPILNLLCILDG-----KV 165 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + +I N + G+++ +V++ D Y+ L+ + V+L E R N I N L Sbjct: 166 LPVKFADIEANNKSRGNKYTHKEFFEVKNFDSYVSQLQNSNVILCQEERLNFIFNQIRNL 225 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A L + L+ E+ G++E+ V MG DK++ LP+ELI + QK T Sbjct: 226 TEANNLVCENNIKLINELNGILEYPLVIMGHVDKQFSELPKELILSVMHNYQKYLAVFTS 285 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + + FI +S+I +I+QG++ V+ ARL DA K+D KE ++ Sbjct: 286 DKITN--FITISSI----SNDSILQGHNNVLNARLVDASFLIKKD----------KEYSI 329 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRA 414 + ++ K +VFHAK+G+ E+V+RI L K I+ I + + V+RA Sbjct: 330 DYYIEKLK------------HIVFHAKLGSIFEKVNRIVALSKYISMWIPHSSLIKVERA 377 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL T V+EFPELQG +G YA E ++I + +P + P++ I+ Sbjct: 378 AELSKFDLATLAVKEFPELQGIMGGYYASHFGEIPEISESIVSYYEPTNSSKKTPSSPIA 437 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII------------RIILENKID 522 IT+S++DKLDTL+ E+ +GS+DP+++RR + II R+++E + Sbjct: 438 ITLSISDKLDTLVGMVVAGEQVTGSRDPFSMRRMAISIIRVIIENNINIPIRLLIEKSVS 497 Query: 523 IPLSQFIEDQNL--------------------ILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + ++ +E + + + F +R K+ L D IR D+I A+L Sbjct: 498 LYSNRLVEGKTIRKIKDVISRTNKKKSIVSYVLEFCSNRFKIMLKDYGIREDVIRAVLDN 557 Query: 563 EN--DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 + +NLL I LN + + G++ + + KR+ I++ + N + Sbjct: 558 DKKFNNLLMIKKEAIVLNSYIDTENGKEIIKAYKRLHNIISKDNVINS-----------I 606 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL---------------LHSICEPIEIFF 665 ++ K+L F T+ + ++ + +Q G++ L+++ + F Sbjct: 607 IKCNKKL------FSTNEEINLCKETIYQKGNIKKLLKNKKFNESLDNLYNLSCYVNNFM 660 Query: 666 DQVLVN-VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D + VN V ++ + NRLSL++ I +V + KI Sbjct: 661 DNIKVNDVTNKALYKNRLSLIKTTFYIFNLVTDFNKI 697 >gi|269122522|ref|YP_003310699.1| glycyl-tRNA synthetase subunit beta [Sebaldella termitidis ATCC 33386] gi|268616400|gb|ACZ10768.1| glycyl-tRNA synthetase, beta subunit [Sebaldella termitidis ATCC 33386] Length = 680 Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 212/716 (29%), Positives = 350/716 (48%), Gaps = 91/716 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PAR + +L ++ LKEE + + +++ + TP RL L ++G++ Sbjct: 2 DFLFEIGVEELPARYVDSSEAELKKLMTESLKEERISFGSVKSFSTPRRLALLIEGMAEK 61 Query: 63 SPEKIEERLGPRVGA----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-K 115 E ++ GP V A GK KA +GFL+ Q + IK + Y++V + Sbjct: 62 QEELHKKSTGPSVEAAYKDGKLTKAGEGFLKG---QNADEADIKIIENEKGKYISVEKFY 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L ++ A++ + + KSM+WS F + RP+K IL +L K+ Sbjct: 119 AGKDTAEILPDLLNKALKGLTFDKSMKWSDKQ-----FRFARPIKWILALL-----DNKV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + I T G R A + + ++ Y LE+ V+ D R+ IL Sbjct: 169 LDFTFEGIKASGKTRGMRNFASQDVVINNITEYESILEKNYVIADHNKRKEKILESIREN 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G +++ + LLEE++ LVE+ G F+K YL LPE++I +T++T+Q+ F + + Sbjct: 229 CENDGDQVIINDYLLEEVLNLVEYPYAIKGEFNKNYLELPEDIITITMETHQRYFPVKDK 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G LAN F+L+ N A A+ +GN +V+ RL DA F+ Sbjct: 289 DGKLANKFVLIRN--APVYSEAVKKGNEKVIEPRLADAKFFYDE---------------- 330 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD--- 412 DL LDQ + +L +VVF +GT E++ R +KIA I +++ L D Sbjct: 331 ----DLKVKLDQNVEKLK--NVVFQKDMGTIYEKIQR----SEKIADYIISELKLDDKKE 380 Query: 413 ---RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 R + L+KADL + ++ +EF +LQG +G+ YA + E S I EH PR + Sbjct: 381 DIKRTVYLAKADLVSNVIGEKEFTKLQGFMGEVYARHEGEKESVAKGIFEHYLPRYFGDI 440 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P +ADK+DT+ +A+ P+ SKDPYALRRA GI+ + L +DI + Sbjct: 441 LPKTIEGAVAGIADKIDTITGCFAVGLIPTSSKDPYALRRAAQGIVSVCLFQNLDIDYDR 500 Query: 528 FIEDQNLIL-------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 I+ I FF RL LY+ ++ DLI ++ E + Sbjct: 501 LIDTTLEIFSENKEIKGKKEEVAAQIKEFFKQRL-LYILSEELDKDLITYVINLET-KIG 558 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP-QYLLLEA--EK 625 T+ D +K L E + K E + KR+ IL RE + +P Q L E E Sbjct: 559 TLKDRVKILEELSKTDKFEILVNLLKRVRNIL-------RENKAQGNPVQEDLFEKAEET 611 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 +L+ D+ ++++++ +R+++I ++L I FFD V+V + E+++NR Sbjct: 612 KLF----DYIKRLEKTVNEERFYEIVNILLENAHIINDFFDNVMVIAEKNEIKNNR 663 >gi|300214614|gb|ADJ79030.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus salivarius CECT 5713] Length = 636 Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 192/589 (32%), Positives = 291/589 (49%), Gaps = 70/589 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL+ Sbjct: 5 FLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 + EE GP G KA GF+R G+ T+ D K+ KG Y+ V + Sbjct: 65 ADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGV-TVDDIFFKE--LKGTEYVYVKKFI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + +VL + VA+ + +P MRW + F ++RP+K ++ +L E + Sbjct: 122 PGKPVAEVLTGMKDVAMD-LKFPTMMRWGSND-----FEYVRPIKWLVALLDNE-----V 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ +I G T GHRF + V S D Y+ LE V+ D R+ I L Sbjct: 171 VPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQIDAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F + Sbjct: 230 ATEKNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFYVTDK 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L F+ V N D ++ GN +V+ ARLEDA F++ DQ + Sbjct: 290 EGNLLPNFVSVRN-GNKDYLENVIAGNEKVLTARLEDAKFFYEEDQQH------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 + + RL V+FH KIGT E++ R+ +L K + L + ++ +D Sbjct: 337 --------TIADYVERLKK--VMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETELKDLD 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P +P + Sbjct: 387 RASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGELPQSN 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------ 526 + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 447 VGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPVLHAAI 506 Query: 527 --QFIEDQNLI-------------LFFHDRLKLYLHDRDIRHDLIEAIL 560 + E ++L F DRL L R D+++A++ Sbjct: 507 NYAYAEREDLYKNTQPIANISETDTFVIDRLAQVLSGNKFRRDILDAVV 555 >gi|15616755|ref|NP_239967.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681510|ref|YP_002467895.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471191|ref|ZP_05635190.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11135203|sp|P57235|SYGB_BUCAI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781844|sp|B8D8T6|SYGB_BUCA5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|25293201|pir||E84945 glycine-tRNA ligase (EC 6.1.1.14) beta chain [imported] - Buchnera sp. (strain APS) gi|10038818|dbj|BAB12853.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624353|gb|ACL30508.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 690 Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 212/699 (30%), Positives = 338/699 (48%), Gaps = 72/699 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 7 LIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDID---- 62 Query: 65 EKIEERL------GPRVGAGKKAIDGFLRSTGLQTISDC------QIKKDPKKGDVYLAV 112 I ER GP + DGFL + + C I+ +KG+ Sbjct: 63 --ITERFVEIKKRGPSIINSYDK-DGFLTEAATRWLKHCGININQAIRLKNEKGEWLFYK 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 RK + IE ++ I A++ + KSMRW + S RP+++I+ +L Sbjct: 120 TRKKQENIESLIPKITESALKNISIKKSMRWGQDNQKFS-----RPIRNIVILL-----D 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 +K+I D+ I N+ H IK++ Y + L E+ ++ D R+ I+ D Sbjct: 170 KKVIPGDVFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIED 229 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 230 IENIAKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFP 289 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 290 IYNSEKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDR---------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV Sbjct: 339 ----------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDS 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P Sbjct: 387 IRAALLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCT 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 447 PIGCGLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKK 506 Query: 531 ---------DQNLIL------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +LIL FF RL + + +I+++L ++ L+ I I+ Sbjct: 507 SLSLYNKKNEDDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQ 566 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F Sbjct: 567 AISFFKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFD 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 + + K+Y+ I + S PI FF +V + D Sbjct: 624 NYTKNLFLEKKYNDILIKIKSFENPIYNFFKKVKIYHSD 662 >gi|58579621|ref|YP_197833.1| glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] gi|58418247|emb|CAI27451.1| Glycyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 710 Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 210/757 (27%), Positives = 366/757 (48%), Gaps = 116/757 (15%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEE+PA MQ A + + L + + + +++ + T +R+ + + + Sbjct: 9 MPLELLFECLSEEVPAEMQSSAYFYVDSYIKKELNKNNISFSSVKVFVTSNRISVCVSDI 68 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISD---CQIKKDPKKGDVYLA-VLRK 115 +S + + GPRV + K A+DGFL+ G + +D C++ D D Y A + K Sbjct: 69 INNSLKNAQRVKGPRVSSDKSAVDGFLKKVG-KNFNDLIICKVGND----DFYYADISNK 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + LIE VL +I+ + PW K MRW + WIRP+ ++LCIL K+ Sbjct: 124 NETLIETVLSSIIENMLHNFPWNKKMRWGNGKT-----YWIRPILNLLCILDG-----KV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + +I N + G+++ +V++ D Y+ L+ + V+L E R N I N L Sbjct: 174 LPVKFADIEANNKSRGNKYTHKEFFEVKNFDSYVSQLQNSNVILCQEERLNFIFNQIRNL 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A L + L+ E+ G++E+ V MG DK++ LP+ELI + QK T Sbjct: 234 TEANNLVCENNIKLINELNGILEYPLVIMGHVDKQFSELPKELILSVMHNYQKYLAVFTS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + + FI +S+I +I+QG++ V+ ARL DA K+D KE ++ Sbjct: 294 DKITN--FITISSI----SNDSILQGHNNVLNARLVDASFLIKKD----------KEYSI 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRA 414 + ++ K +VFHAK+G+ E+V+RI L K I+ I + + V+RA Sbjct: 338 DYYIEKLK------------HIVFHAKLGSIFEKVNRIVALSKYISMWIPHSSLIKVERA 385 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL T V+EFPELQG +G YA E ++I + +P + P++ I+ Sbjct: 386 AELSKFDLATLAVKEFPELQGIMGGYYASHFGEIPEISESIVSYYEPTNSSKKTPSSPIA 445 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII------------RIILENKID 522 IT+S++DKLDTL+ E+ +GS+DP+++RR + II R+++E + Sbjct: 446 ITLSISDKLDTLVGMVVAGEQVTGSRDPFSMRRMAISIIRVIIENNINIPIRLLIEKSVS 505 Query: 523 IPLSQFIEDQNL--------------------ILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + ++ +E + + + F +R K+ L D IR D+I A+L Sbjct: 506 LYSNRLVEGKTIRKIKDVISRTNKKKSIVSYVLEFCSNRFKIMLKDYGIREDVIRAVLDN 565 Query: 563 EN--DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 + +NLL I LN + + G++ + + KR+ I++ + N + Sbjct: 566 DKKFNNLLMIKKEAIVLNSYIDTENGKEIIKAYKRLHNIISKDNVINS-----------I 614 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL---------------LHSICEPIEIFF 665 ++ K+L F T+ + ++ + +Q G++ L+++ + F Sbjct: 615 IKCNKKL------FSTNEEINLCKETIYQKGNIKKLLKNKKFNESLDNLYNLSCYVNNFM 668 Query: 666 DQVLVN-VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D + VN V ++ + NRLSL++ I +V + KI Sbjct: 669 DNIKVNDVTNKALYKNRLSLIKTTFYIFNLVTDFNKI 705 >gi|206559296|ref|YP_002230057.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia J2315] gi|198035334|emb|CAR51209.1| putative glycyl-tRNA synthetase beta chain [Burkholderia cenocepacia J2315] Length = 699 Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 209/713 (29%), Positives = 345/713 (48%), Gaps = 63/713 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +P++ + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPDRQVREKVLP 81 Query: 74 RVGA----GKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 A GK + L +I+D + +D K + + + D L+ Sbjct: 82 VSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQD-GKAEAFFINYSAAGATLADGLQ 140 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + A+ K+P PK M + S ++RP+ + + ++I+ + + Sbjct: 141 AALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRIVPVTAFGVDA 193 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 G+ T GHRF + + +Q Y L ++ V+ RR I + A+ G +V Sbjct: 194 GDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHAN--GDTVV 251 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F+ Sbjct: 252 MPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSRFL 311 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 +VSNI+ G I++GN RVV RL DA F+++D+ KP Sbjct: 312 IVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK--------------------KP 350 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL T Sbjct: 351 LADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADLLT 408 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E A EH +PR + +PT +S V+LADKL+ Sbjct: 409 DMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADKLE 468 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN----------- 533 T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 469 TIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFNGVPGVAE 528 Query: 534 ----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 529 STDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAEAL 588 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 589 AAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAYTG 645 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 646 ALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|145638254|ref|ZP_01793864.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] gi|145272583|gb|EDK12490.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] Length = 639 Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 191/633 (30%), Positives = 306/633 (48%), Gaps = 58/633 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A GK KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWAD-----KTVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLCEKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 293 KDGRLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L R+ RL+ V+F K+GT ++ RI L +IA+ I AD A RA Sbjct: 334 --FKTDLKQKLVDRLPRLET--VLFQQKLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 531 -------DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +QN++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 F + E + KR+ ILA + EI+L Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINL 602 >gi|198284299|ref|YP_002220620.1| glycyl-tRNA synthetase subunit beta [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666492|ref|YP_002426961.1| glycyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|226737046|sp|B7J7P8|SYGB_ACIF2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238689970|sp|B5EMS4|SYGB_ACIF5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|73612130|gb|AAZ78227.1| glycyl-tRNA synthetase beta chain [Acidithiobacillus ferrooxidans] gi|198248820|gb|ACH84413.1| glycyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518705|gb|ACK79291.1| glycyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 694 Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 197/713 (27%), Positives = 327/713 (45%), Gaps = 63/713 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PAR Q + + I+ LL G+ + ++ Y TP RL L++K +S S + R GP Sbjct: 17 PAREQMPLQDAATGIIGQLLDAAGLQFGSIHGYVTPRRLALWIKDVSRQSLPQETLRRGP 76 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 V G A +GF RS G+ D + + +KG V + +L Sbjct: 77 LVARARDAQGKPTAAAEGFARSCGVSL--DDLLTLETEKGPVLAWREVGTAQDSHALLPE 134 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 I + +P K MRW S++RP++ +L +++D + + G Sbjct: 135 IASRLVTSLPLRKRMRWGAGSD-----SFLRPVRWLLL-----RQGGQVLDWKMFGLDAG 184 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++GHR H P +++ + Y L +A V++D RR I LA + + + Sbjct: 185 GESFGHRVHHPQAVRISTPAGYAGSLLQAKVMVDFAERRAHISGKMAALADEMAVTPILP 244 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL+EI GL EW V GSF YL +PEE + + +Q+ R R L ++ Sbjct: 245 EALLDEITGLNEWPVVLAGSFAADYLRVPEEALITVMMQHQRYVPLRGRNERLVPHYLFA 304 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 +N+ + D ++ GN+RV+ ARL DA FW +D+ + Sbjct: 305 ANLHSRDT-QVVIDGNNRVLRARLADAAFFWDQDRQ----------------------IS 341 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEI 426 + R + V+F +G+ ++ R++ L ++ D ++RA L K+DL + + Sbjct: 342 LQTRRAALAGVLFQDGLGSILDKTVRLQELAAALSPQFAVDAGDMNRAAALCKSDLLSGL 401 Query: 427 VREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 V EFPELQG +G YA EN AI +H P G + +P + +++ADKLDTL Sbjct: 402 VGEFPELQGIMGGHYARHDGENNRVATAIAQHYLPSGRDDEIPADAHGQCLAIADKLDTL 461 Query: 487 INFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------------E 530 F+AI + P+G +DP+ALRRA LG++RI+L+ + + L + + E Sbjct: 462 CGFFAIGKVPTGDRDPFALRRAALGVLRIVLDAGVPLNLDEAVTRTLAAYGGAFARNRTE 521 Query: 531 DQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ IL FF DR+++Y + R D I A+L + L ++ L F + Sbjct: 522 IRSAILDFFQDRMRVYFREEGFRADQIAAVLSRQPHEPLDARQRLEALALFQAEHAAADA 581 Query: 590 LLS-AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L + KRI +L K+ I PQY + E L+ + + +RY Sbjct: 582 LAALIKRINNLL---RKEVISGDWPIDPQYFMDPVENTLWDYWQALEQPLHAQLAERRYT 638 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 LL + ++ FFD V+V +D +R NRL+LL ++ L + + ++ Sbjct: 639 AALGLLAGLRPAVDQFFDGVMVLAEDPVLRQNRLALLARLQEAFLRIADFSQL 691 >gi|325526257|gb|EGD03874.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. TJI49] Length = 699 Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 205/683 (30%), Positives = 336/683 (49%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGA----GKKAIDGFLRSTGLQ----TIS 95 +Y TP RL + ++ + +PEK + E++ P A GK + L +I+ Sbjct: 52 RYATPRRLAVVVQNVRAVAPEKQVREKVLPVSVALDAEGKPTAPLAKKLAALGHPNLSIA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + +D K + + + D L+ + + K+P PK M + + + Sbjct: 112 DLERAQD-GKAEAFFVNYSAAGATLADGLQAALDETLAKLPIPKFMTYQRPDG--TDVKF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+ + + ++++ + I G+ T GHRF + + +Q Y L ++ Sbjct: 169 VRPVHRLTVL-----HDDRVVPVTAFGIDAGDTTLGHRFLSDGLVAIQHARAYADTLRDK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+ RR I + A+ G +V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVIAHFGDRRETIRTQLNEHAN--GDTVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ G IV+GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDIAGKLRSRFLIVSNIETKTPGE-IVEGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F+++D+ KPL +R+ L +VV+H K+G+ RV R+ Sbjct: 341 FFFEQDKK--------------------KPLAERVPLL--ANVVYHNKLGSALARVERLE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L +IA I ADVA RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 ALAGEIAPAIGADVAHAKRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPDDVALA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +PT +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CAEHYQPRFSGDALPTTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAI 559 ++LE ++ + L + E + IL FF DRL+ L +R ++A+ Sbjct: 499 LLLEKQLPLDLVSLLRTAYARFAGVPGVAESTDAILAFFMDRLRGLLRERGYSAGEVDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L + +V + + EF A+ E + KRI IL +K + + P L Sbjct: 559 LGLNPTRVDDLVARLDAVREFTRLAEAEALAAANKRISNIL---KKSEGATNGAVQPTLL 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + AEK L+ ++ H+Q ++ + Y L ++ P++ FF+ V+VN +D +R Sbjct: 616 VEAAEKALHEQLAAVTPHVQSQLEARAYTGALSALAALRAPVDTFFNDVMVNAEDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLFALHQQMNCVADISKLA 698 >gi|323340797|ref|ZP_08081049.1| glycyl-tRNA synthetase beta subunit [Lactobacillus ruminis ATCC 25644] gi|323091920|gb|EFZ34540.1| glycyl-tRNA synthetase beta subunit [Lactobacillus ruminis ATCC 25644] Length = 692 Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 214/727 (29%), Positives = 351/727 (48%), Gaps = 89/727 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 ++LLEI EEIPA + + L + LKE + + + Y TP RL L + GL+ Sbjct: 4 NYLLEIGLEEIPAHVVTPSINQLVERMTSFLKENRLSFDKIEAYSTPRRLALKVIGLADK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP + G KA GF R G +S ++ KG Y+ V + Sbjct: 64 QEDIEELAKGPAKKIAYDKDGNWSKAAQGFARGQG---VSVDELFFQELKGVEYVYVKKF 120 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++VL ++ V + ++ +P MRW + F ++RP++ I+ +L E K Sbjct: 121 IAGKSAKEVLTSVKEV-VMEMKFPTMMRWGSND-----FEYVRPIRWIVSLLNDEIVSFK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++DL+ G + GHRF ++V++ D Y L++ MV+ D R+ I++ Sbjct: 175 VLDLE-----TGRKSQGHRFLGKE-VEVRNADAYPECLKQEMVIADARERKEIIMSQIDE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA +V D DLLEE+ LVE+ VF GSFD+KYL +P+ ++ ++K NQ+ F Sbjct: 229 LAKKNSWNIVVDPDLLEEVNNLVEYPTVFAGSFDEKYLSVPDAVLITSMKDNQRYFYVED 288 Query: 295 REGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L F+ V N G A +V GN +V+ ARLEDA F++ DQ Sbjct: 289 SDGKLLPHFVSVRN-----GNDAYLENVVSGNEKVLTARLEDAKFFYEEDQK-------- 335 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV----LGKKIAQLIDA 406 + + + RL V+FH KIGT E++ R+ + LGK + L Sbjct: 336 ------------QTISDYVERLK--KVMFHDKIGTIYEKMERVALIAAYLGKHLG-LSQT 380 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +A + RA ++ K DL T +V EF ELQG +G+ YA L E + A+ E P Sbjct: 381 QLADLKRAAMIYKFDLVTGMVGEFSELQGVMGEIYASLFGETDAVASAMREEYMPTSSEG 440 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN--KIDIP 524 ++P + I +S+ADK D++ F++ PSGS DPYALRR LGI+RI L+ + +P Sbjct: 441 DLPESTIGAVLSIADKADSIQAFFSAGMIPSGSNDPYALRRQALGIVRIALDKGWNLSVP 500 Query: 525 L------SQFIEDQNLIL-------------FFHDRL-KLYLHDRDIRHDLIEAILRPEN 564 L S F E +L F DR+ ++ + D+ D + A L ++ Sbjct: 501 LLHEAIMSAFKERGDLYANIDPEKNYAGVKDFMFDRVAQIIGSNNDVGRDALAAALANKD 560 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + +++++ + L + A + F + + + ++ + +K + E + + +AE Sbjct: 561 NEFVSVLEAAETLTK---HASDDDFKETIEALTRVSRLAKKADFEAA-SVDESLFENDAE 616 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K+ + D ++ Q+ K Y LH + I +FD +V DD +V+ NRLS Sbjct: 617 KKFH----DACSNAQKGYCCKSYEDKYQALHGLKGAISEYFDATMVMADDEKVKHNRLSQ 672 Query: 685 LQYIKNI 691 L + N+ Sbjct: 673 LVLLSNL 679 >gi|219682066|ref|YP_002468450.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254781845|sp|B8D740|SYGB_BUCAT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219621799|gb|ACL29955.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 690 Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 212/699 (30%), Positives = 339/699 (48%), Gaps = 72/699 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 7 LIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDID---- 62 Query: 65 EKIEERL------GPRVGAGKKAIDGFLRSTGLQTISDC------QIKKDPKKGDVYLAV 112 I ER GP + DGFL + + C I+ +KG+ Sbjct: 63 --ITERFVEIKKRGPSIINSYDK-DGFLTEAATRWLKHCGININQAIRLKNEKGEWLFYK 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 RK + IE ++ I A++ + KSMRW + S RP+++I+ +L Sbjct: 120 TRKKQENIESLIPKITESALKNISIKKSMRWGQDNQKFS-----RPIRNIVILL-----D 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 +K+I D+ I N+ H IK++ Y + L E+ ++ D R+ I+ D Sbjct: 170 KKVIPGDVFNITSKNLLQNHLSLKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIED 229 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 230 IENIAKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFP 289 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 290 IYNSEKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDR---------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV Sbjct: 339 ----------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDS 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P Sbjct: 387 IRAALLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCT 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 447 LIGCGLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKK 506 Query: 531 ---------DQNLIL------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++LIL FF RL + + +I+++L ++ L+ I I+ Sbjct: 507 SLSLYNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQ 566 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F Sbjct: 567 AISFFKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFD 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 + + K+Y+ I + S PI FF +V + D Sbjct: 624 NYTKNLFLEKKYNDILIKIKSFENPIYNFFKKVKIYHSD 662 >gi|118594506|ref|ZP_01551853.1| glycyl-tRNA synthetase, beta subunit [Methylophilales bacterium HTCC2181] gi|118440284|gb|EAV46911.1| glycyl-tRNA synthetase, beta subunit [Methylophilales bacterium HTCC2181] Length = 697 Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 210/733 (28%), Positives = 364/733 (49%), Gaps = 76/733 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDL------SIILIGLLKEEGVIYQNMRQYWTPHRLFLYL 56 + L+EI +EE+P Q E SI+ + L+ E + Y+ + +P R+ + + Sbjct: 5 NLLIEIVTEELPPLSQKDLGEAFAKNIAQSILELKLI--ESLEYET---FSSPRRIGVLV 59 Query: 57 KG-LSPHSPEKIEERLGP-RVG--AGKKAIDGFLR-----STGLQTISDCQIKKDPKKGD 107 K L EK + +L P +VG K D ++ GL I + ++ ++ + + Sbjct: 60 KQVLLSGDNEKRKIKLMPAKVGFREENKPSDALIKKLDSMGEGLSAIKNLELVEEKGQFN 119 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 +YL K L E+ L I+ ++ +P K M + + +++RP+K+IL + Sbjct: 120 IYLEKSFDGKSLYEE-LPQIINNSLAHLPIKKLMSYQLNDG-WTTVNFVRPIKNILAVY- 176 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI-KVQSLDHYIRDL-EEAMVLLDPECRR 225 +K++DL+ + TYGHRF + H + + Y + L E V+ R+ Sbjct: 177 ----GDKLVDLECMGLKSVMHTYGHRFESKHDVLAIHDASLYEKVLLTEGRVIASFSKRK 232 Query: 226 NAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I D + + + D LLEE+ LVE + +G F+ +YL +P+E + LT+ Sbjct: 233 EKIKTDLNEAVKKINNKFRAITDDKLLEEVTSLVEMPNILIGEFENQYLEVPQECLILTM 292 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 ++NQK F + L N F++VSNI + I++GN +V+ RL DA F+K+D Sbjct: 293 QSNQKYFPILNDQDELTNYFVIVSNINPKNS-TNIIEGNEKVIRPRLADAEFFYKKD--- 348 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 + + K++ +L + +H K+GTQ +R R+ + K I++ Sbjct: 349 ------MAYTLKKYSENLR-------------SITYHNKLGTQHDRALRVASIMKFISKK 389 Query: 404 IDA-DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 ++ +V + + +KADL +V EFPELQG IG+ YA+ + DAIE+H P+ Sbjct: 390 LNVKNVTNFENLALHAKADLLCLMVGEFPELQGVIGRYYALNEGHANDFADAIEDHYNPK 449 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 +P ++ +++ADK++TL++ ++I EKP+G KDP+ALRR +G+IRI+ E I Sbjct: 450 FSGGKLPREQMGDMLAIADKIETLMSLFSIGEKPTGVKDPFALRRNAIGLIRILAEKNIP 509 Query: 523 IPLSQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPEN-DNLLT 569 + L + ++ L F DRL YL D+ +EA+ P+ DN+L Sbjct: 510 LELDELLKTFYPNSDLKSLNELTAFIQDRLINYLKDKGFTPQQVEAVAGEMPKTLDNILE 569 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + +K FS + L SA KR+ IL N E I P L+ EK L+ Sbjct: 570 RANAVK----LFSQLNQSEDLASANKRVVNILKKYNSNNMET---IDPSLLIENEEKFLF 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +++ I+E + K Y + +L ++ EPI++FF++++VN DD ++ NR +LL + Sbjct: 623 KSLNETSKKIREFVKAKDYDRALSILINLKEPIDLFFEKIMVNADDDAIKKNRHNLLIQL 682 Query: 689 KNIILIVINVQKI 701 + V N+ K+ Sbjct: 683 YKEMNCVANISKL 695 >gi|226939677|ref|YP_002794750.1| glycyl-tRNA synthetase subunit beta [Laribacter hongkongensis HLHK9] gi|226714603|gb|ACO73741.1| GlyS [Laribacter hongkongensis HLHK9] Length = 692 Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 205/702 (29%), Positives = 342/702 (48%), Gaps = 61/702 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN-MRQYW-TPHRLFLYLKG 58 M L+E+++EE+P + + E + ++ L G++ N + W +P RL + + Sbjct: 1 MTTLLVELFTEELPPKALKRLGESFADVIRAELARAGLLEDNAVATAWASPRRLAVSIDH 60 Query: 59 LSPHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYL 110 + +P++ + E++ P G A+ L + G+ + Q ++ P K + + Sbjct: 61 VRATAPDRDVTEKIMPVAVALAADGQPSPALRKKLEARGIALDAVAQFERRPDGKHETFF 120 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + D L V +++K+P PK M W S +++RP+ ++ + +E Sbjct: 121 YTYTAAGARLADELPRAVQESVRKLPIPKVMHWGD-----SDVTFVRPVHKLVALYGSE- 174 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 IID ++ + IT GHRF + I + + Y R LE E V+ + RR I Sbjct: 175 ----IIDCEVLGLFSDRITGGHRFLSEGDISLPDAESYARVLEQEGRVVAGFDDRRERIR 230 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A + + D LL+E+ LVEW V F+ ++L +P+E + LT++ NQK Sbjct: 231 AGLDAAARRLNATIAADDALLDEVTALVEWPVVLEAGFEAEFLKVPQECLILTMQQNQKY 290 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L N F+LVSN++ +D + I++GN RV+ ARL DA F+++DQ Sbjct: 291 FPLLDANGRLMNRFLLVSNLETADP-SHIIKGNERVLRARLSDAKFFFEQDQK------- 342 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 + L+ R+ RL DVV+H ++G+Q ER R+ VL IA+ + AD A Sbjct: 343 -------------QKLEARIPRL--ADVVYHNQLGSQLERTERLAVLAGDIARALGADAA 387 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + +RA L+KADL T++V EFPELQG +G+ YA++ E DAIE H PR +++P Sbjct: 388 IAERAARLAKADLLTDMVGEFPELQGVMGRYYALIDGELPIVADAIEGHYHPRFAGDSLP 447 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI------ 523 I+ V+LADKL+ L W I P+G KDP+ LRR LG++R+++ ++D+ Sbjct: 448 DGDIATAVALADKLEMLTGIWGIGLVPTGDKDPFGLRRQALGVMRMLMNARLDLKALLER 507 Query: 524 -----PLSQFIEDQ--NLILFFHDRLK-LYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 P + D L +F +RLK L D R D ++A+L E + + ++ Sbjct: 508 AVATFPAGKLAADTAPALYVFMLERLKNLLTADAATRADEVDAVLALEPGHFDEVPAVLA 567 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ IL +K E+ + L AE L+ I Sbjct: 568 AVAAFRALPEAAALAAANKRVKNIL---KKVEGELPTGVDAALLTEAAETELWQSIDAVL 624 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 ++ + + Y L + P++ FFD V+V DD V Sbjct: 625 PTVEAAFAARDYATALSRLAVLKVPVDAFFDGVMVMADDAAV 666 >gi|188591265|ref|YP_001795865.1| glycyl-tRNA synthetase subunit beta [Cupriavidus taiwanensis LMG 19424] gi|170938159|emb|CAP63145.1| glycine tRNA synthetase, beta subunit [Cupriavidus taiwanensis LMG 19424] Length = 707 Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 204/719 (28%), Positives = 340/719 (47%), Gaps = 83/719 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + + + + L L E ++ + + TP RL + G+ Sbjct: 9 LLIELFTEELPPKALARLGDAFAQGLFAGLGERDLLEPGATVTPFATPRRLAALVSGVRR 68 Query: 62 HSPEKIEERL------------GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 ++P++ E+R G K + RS G+ I D Q + G Sbjct: 69 NAPDR-EQREKVLPLSVALDANGEPTAPLAKKLAALARSVGVAEI-DWQALERGSDGKAE 126 Query: 110 LAVLRKPKRLIE--DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 R R E L+ + + K+P PK M + S ++RP S++ + Sbjct: 127 AFFYRYTARGAELAAGLQATLEDTVAKLPIPKVMSYQRPDG--STVHFVRPAHSLIALFG 184 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 +E I+ + L + N+T GHRF + I+++ + Y + LE A ++ R Sbjct: 185 SE-----ILPVTLLGLQASNLTQGHRFLSHGAIEIRHANDYAQQLESAGRVVASYAERRE 239 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 + A L A +++ + LL+E+ LVEW V+ F++ +L +P+E + LT++TNQ Sbjct: 240 RMRSA-LLQEAGADQVIMPEALLDEVNSLVEWPVVYACHFEEAFLAVPQECLILTMQTNQ 298 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F +G L N F++VSN+ A++ +I+ GN RVV RL DA F Sbjct: 299 KYFALTDADGHLRNRFLIVSNL-ATETPQSIISGNERVVRPRLADAKFF----------- 346 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA- 406 F+ D K L R+ +L VV+H KIGTQ +RV R++ + +A ++A Sbjct: 347 ---------FDQDRKKTLASRVPQL--ASVVYHNKIGTQLDRVQRLQQIAGHVADALNAA 395 Query: 407 ----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D A R L+KADL T++V EFPELQG +G YA +E A EH +PR Sbjct: 396 GVATDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDEAEDVALACSEHYRPR 455 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P +S V+LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E + Sbjct: 456 FAGDALPAGAVSTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEKPLA 515 Query: 523 I--------------------PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + P + I D F +DR++ YL D+ + +EA++ Sbjct: 516 LSLASLLAQTQQAFAGIAAVKPAPEAILD-----FLYDRVRGYLKDKGYTTNEVEAVVSL 570 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 D L I+ ++ + F + + E + KRI IL +KN E ++P + Sbjct: 571 RPDQLHDILGRMEAVRTFAALPEAEALAAANKRITNIL----RKNTEPVGAVNPALFRED 626 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 AE L+A I ++ + + L + + ++ FF+ V+V +D ++R NR Sbjct: 627 AEGALHAAIERVRPAVEAAFASGDFTTALRDLAQLRDAVDQFFNDVMVMAEDAQLRANR 685 >gi|311086449|gb|ADP66530.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 690 Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 211/699 (30%), Positives = 339/699 (48%), Gaps = 72/699 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 7 LIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDID---- 62 Query: 65 EKIEERL------GPRVGAGKKAIDGFLRSTGLQTISDC------QIKKDPKKGDVYLAV 112 I ER GP + DGFL + + C I+ +KG+ Sbjct: 63 --ITERFVEIKKRGPSIINSYDK-DGFLTEAATRWLKHCGININQAIRLKNEKGEWLFYK 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 RK + IE ++ I A++ + KSMRW + S RP+++I+ +L Sbjct: 120 TRKKQENIESLIPKITESALKNISIKKSMRWGQDNQKFS-----RPIRNIVILL-----D 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 +K+I D+ I N+ H IK++ Y + L E+ ++ D R+ I+ D Sbjct: 170 KKVIPGDVFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIED 229 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 230 IENIAKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFP 289 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 290 IYNSEKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDR---------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L+ R+ L + V+F +G+ E+ RI++L K IA+ ++V Sbjct: 339 ----------KVKLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSNVEDS 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P Sbjct: 387 IRAALLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCT 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 447 PIGCGLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKK 506 Query: 531 ---------DQNLIL------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++LIL FF RL + + +I+++L ++ L+ I I+ Sbjct: 507 SLSLYNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQ 566 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F Sbjct: 567 AISFFKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFD 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 + + K+Y+ I + S PI FF +V + D Sbjct: 624 NYTKNLFLEKKYNDILIKIKSFENPIYNFFKKVKIYHSD 662 >gi|237741059|ref|ZP_04571540.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 4_1_13] gi|229431103|gb|EEO41315.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 4_1_13] Length = 686 Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 200/723 (27%), Positives = 357/723 (49%), Gaps = 81/723 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + ++ Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKSNFERKLKNNRIKFSGVKTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + G KA +GFL++ ++ IK D KG+ Y+A R Sbjct: 62 QEDLDELNIGPSRERAYKNGVLTKAGEGFLKAHRIEEEQIEIIKND--KGE-YIAFKRFS 118 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K + E +L I+ + + +PKSMRWS + RP++ L + +K+ Sbjct: 119 KGKPTETILPEILKALVLEETFPKSMRWSD-----KTIRFARPIEWFLALY-----GDKV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI---LNDA 232 +D +++ I N + GHRF +V S++ Y++ + E V++D RR I +N++ Sbjct: 169 VDFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINNS 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 V + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F Sbjct: 228 LLEDEKVDV----DEALLDEVTNLVEHPFAIVGNFSEDFLEVPQEVLIISMKVHQRYFPV 283 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 284 LSKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED------------ 329 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L PLD + +L VVF +GT ++V R + + + + + + D Sbjct: 330 --------LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKED 379 Query: 413 --RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + + Sbjct: 380 ILRTVKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIKEHYYPRFQGDLL 439 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II++ +DI L Sbjct: 440 PSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIIKANLDISLKDL 499 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ + +++ F R+ D R D+I ++L + DN+ Sbjct: 500 VKVSLDALEADKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADNITN 559 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +++++ + E S K + L + KR+F I+ K +++++ I + + EK LY Sbjct: 560 ALEIVRVITEKLSKDKMQALLQTVKRVFNIM----KGSKDVT--IKEKLFKNDIEKTLYT 613 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +++++ K Y + L ++ I+ +FD V+V +D+ VRDNR+ L I Sbjct: 614 ESKKVEEEVEKAIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRIGQLTCIM 673 Query: 690 NII 692 N+ Sbjct: 674 NLF 676 >gi|254230343|ref|ZP_04923729.1| glycyl-tRNA synthetase, beta subunit [Vibrio sp. Ex25] gi|262392774|ref|YP_003284628.1| glycyl-tRNA synthetase subunit beta [Vibrio sp. Ex25] gi|151937135|gb|EDN56007.1| glycyl-tRNA synthetase, beta subunit [Vibrio sp. Ex25] gi|262336368|gb|ACY50163.1| glycyl-tRNA synthetase beta chain [Vibrio sp. Ex25] Length = 688 Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 205/699 (29%), Positives = 331/699 (47%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKSAELAHEGVKWFAAPRRLALKVAALAES 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 64 QSDKIVEKRGPAVSAAFDAEGNPTKAAQGWARGCGISVDQAERMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIGADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSNGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--------S 526 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L S Sbjct: 449 TAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAKS 507 Query: 527 QFIE-------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F++ +Q++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFVDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ +I L +AEK L + ++ Sbjct: 568 FRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|262038699|ref|ZP_06012059.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia goodfellowii F0264] gi|261747251|gb|EEY34730.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia goodfellowii F0264] Length = 677 Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 209/732 (28%), Positives = 363/732 (49%), Gaps = 92/732 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+P+R +A +L + LK+E + + + + TP R+ + +K +S Sbjct: 2 DFLFEIGLEELPSRYVDEAESNLKKLTENELKDERINFSEVESFSTPRRIAIIVKDISEK 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-- 114 + ++ +GP V G KA +GF++S G + D +I ++ K Y++V + Sbjct: 62 QEDLDKKSVGPSVDIAFKGGELTKAGEGFVKSQGAEK-EDIKIIENEKGK--YISVEKFI 118 Query: 115 ---KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + K ++ D+L IV +K+ + KSM+W +F + RP+K + +L E Sbjct: 119 KGKETKEILPDILSNIV----KKIEFEKSMKWGE-----KSFRFARPIKWFVTLLGNE-- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 I+D + + I N + G R+ A + + + Y + L+E V+ + R+ IL Sbjct: 168 ---ILDFEFEGIKGSNKSRGMRYFASQDVAISNPSEYEKVLKENFVIAKKDKRKEEILKS 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 G + + + LLEE+I LVE+ G ++K YL LPE++ +T++T+Q+ F Sbjct: 225 IKENCENDGEKAIINNYLLEEVINLVEYPYAIKGEYNKDYLKLPEDITTITMETHQRYFP 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R ++G L N FIL+ N A + + +GN +V+ RL DA F Sbjct: 285 VRDKDGKLTNKFILIRN--APEYSETVKKGNEKVIEPRLADAKFF--------------- 327 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 F+ DL + +L +V F +GT +++ R +KIA+ + + L Sbjct: 328 -----FDEDLKHKFSDNVEKLK--EVTFQKDMGTIYDKIKR----SQKIAEYLINETGLQ 376 Query: 412 D------RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + R + L+KADL T ++ +EF +LQG +G YA Q EN + I EH PR Sbjct: 377 EEKENILRTVELAKADLVTNVIAEKEFTKLQGFMGSVYAEKQGENKNVALGIFEHYLPRY 436 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +++PT +ADK+DT+ +++ KP+ SKDPYALRRA GII + L +K+ Sbjct: 437 QGDSLPTTIEGALAGIADKIDTVTGCFSVGLKPTSSKDPYALRRAVQGIIYVTLNSKLKY 496 Query: 524 PLSQFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 + IE +++ FF R+ L ++ +LI + E+ N Sbjct: 497 DYKKLIEKAYEIFAADKKVLEKNVVEDVTEFFKQRIINVLSEK-YSKELINYEVNLES-N 554 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 ++ + + ++ L + + K EK + KRI IL EEK N ++ I+ E EK+ Sbjct: 555 VVNLDEKLEVLLKLSKTEKFEKLINLLKRIKNILK-EEKGN---AVSINENLFSTEEEKK 610 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY+ + E++++K + + L E I FFD+V +N ++ E+++NR+SLL+ Sbjct: 611 LYSFAEEL-----ENVENKGFFICTETLIENEEIINNFFDKVKINDENPEIKNNRISLLK 665 Query: 687 YIKNIILIVINV 698 ++ I +IN+ Sbjct: 666 KLEKISDKIINL 677 >gi|28198746|ref|NP_779060.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa Temecula1] gi|182681438|ref|YP_001829598.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa M23] gi|32130155|sp|Q87D45|SYGB_XYLFT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238691036|sp|B2I4M9|SYGB_XYLF2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28056837|gb|AAO28709.1| glycyl-tRNA synthetase beta chain [Xylella fastidiosa Temecula1] gi|182631548|gb|ACB92324.1| glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa M23] gi|307579888|gb|ADN63857.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa subsp. fastidiosa GB514] Length = 722 Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 204/754 (27%), Positives = 346/754 (45%), Gaps = 96/754 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + ++ L+ G++ + + TP RL + L ++ Sbjct: 7 LLIELGTEELPVNALPNLSRAFFEGVLAGLERRGIVVDHGEAKSLSTPRRLAVLLTAVAV 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP + G KA++GF G+ + +I+ KG+ ++ + Sbjct: 67 EQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRD--TKGERFVHRVV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L I+ AI +P PK MRW + + RP+ L +L +D Sbjct: 125 VPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVH-WLVMLFGQD---- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I+ + Sbjct: 175 VVEAEIMGVKAGRISRGHRFLYDKPVSLSGPQNYIDVLQAAYVLVDPAARRARIVAEIEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 VARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI+++D A + +G RV+ R DA F Sbjct: 295 SLGKLTEKFIGIANIESNDV-AEVAKGYERVIRPRFSDAKFF------------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL + L RL V +HAK+GT ++V+R+ VL + IA I D L R Sbjct: 336 --FNEDLKQGLKAMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDPLLARRV 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + + + Sbjct: 392 ALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIEDAYRPRFSGDEIARSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R I+E++ D+ L ++ Sbjct: 452 KVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTIIESRFDLDLKVLLDQASD 511 Query: 532 ------------------------------------------QNLILFFHDRLKLYLHDR 549 + L F +RL+ Y D+ Sbjct: 512 WVAFATTIEQERHAQESVKQSKKEAAVKHSVPQVSDEKSARIEELYDFIVERLRGYYADK 571 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 I A+ + +L + + F + + E ++ KRI IL + E Sbjct: 572 GIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNIL-----RKAE 626 Query: 610 ISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 I + S L + AE L + T + ++D K Y + L + PI+ FFD+ Sbjct: 627 IKIPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDK 686 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN ++ +R NRL+LLQ + + V ++ + Sbjct: 687 VMVNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|197122957|ref|YP_002134908.1| glycyl-tRNA synthetase subunit beta [Anaeromyxobacter sp. K] gi|254781843|sp|B4UG87|SYGB_ANASK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|196172806|gb|ACG73779.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter sp. K] Length = 701 Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 209/730 (28%), Positives = 343/730 (46%), Gaps = 69/730 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A L L L + + + +R TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPGALRQLEDDLAKALADARLAHGEVRSVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G A GF RS G++ +S + PK V + + Sbjct: 61 PKQTDARTEAFGPPVAQAYDAEGKPTPAATGFARSQGVE-VSALVRAQTPKGERVAVTKV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K +R E VL ++ + + + K+MR S ++ RP++ ++ +L Sbjct: 120 EKGRR-AEQVLPALLERLVGGLRFRKAMR-----SRFDEATFARPVRWMVALLGG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSL-DHYIRDLEEAMVLLDPECRRNAILNDA 232 + + + E+ G +TYGHRF AP I ++ D Y+ L A VL DP RR A+L + Sbjct: 169 RPLKVRHGEVTSGKVTYGHRFLAPKAIALKGTPDDYLAKLRRAHVLADPVERRAALLAEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R ++ ED L+E+++ LVE +G F+K L LP E++ ++ +Q+ F Sbjct: 229 ARAGKEAAGKVREDPALVEQVLYLVEEPTAVVGEFEKSNLELPPEVVISEMRNHQRYFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS + D A G RV+ ARL DA F++ D+ Sbjct: 289 VDGKGRLKNRFVAVSATRVKDPAVA-RHGYERVLRARLADARFFFEEDRK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L +R+ D+ F AK+G++ +R RI + +A+ + D + D Sbjct: 338 ----------RKLHERIE--DLGRRTFQAKLGSELDRAQRIGAVASALARALGKDALVAD 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A L+K DL T +V EFPELQG +G YA L+ DAIE+H KP G E +P Sbjct: 386 LLEASRLAKVDLNTGMVGEFPELQGTMGAHYARLEGLKPEIADAIEDHYKPIGAAEELPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V++AD+L +L+ + EK +G+ DP+ LRRA +GI+RI++ + L+ +E Sbjct: 446 SDLGALVAVADRLHSLVGIIGVGEKATGAADPFGLRRAAIGILRIVIARGYHLSLAAAVE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F R++ +R DL+EA+L +D+ +VD Sbjct: 506 QTLDALSGVKLAAGRALVAEQVLDFLRGRVRAAWTER-FDADLVEAVLAAGSDD---VVD 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E + AK S F+ +A I+EK + + P L AEK L A + Sbjct: 562 ARRRL-EALADAKARPDFGSLAVAFKRVANIQEKAGGSGAAAVDPALLRDAAEKDLLAAL 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + Y + + ++ + FFD VLV +D +R NRL L++ + + Sbjct: 621 EKVEQEVVARRAARDYPAVLRTVATLEPAVARFFDGVLVMAEDPALRANRLGLMRRVAAL 680 Query: 692 ILIVINVQKI 701 + + +KI Sbjct: 681 FSDLADFRKI 690 >gi|71275842|ref|ZP_00652126.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Dixon] gi|71899338|ref|ZP_00681498.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|170730175|ref|YP_001775608.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa M12] gi|238688047|sp|B0U7B2|SYGB_XYLFM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71163420|gb|EAO13138.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Dixon] gi|71730852|gb|EAO32923.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|167964968|gb|ACA11978.1| Glycine--tRNA ligase [Xylella fastidiosa M12] Length = 722 Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 204/754 (27%), Positives = 346/754 (45%), Gaps = 96/754 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + ++ L+ G++ + + TP RL + L ++ Sbjct: 7 LLIELGTEELPVNALPSLSRAFFEGVLAGLERRGIVIDHGEAKSLSTPRRLAVLLTAVAV 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP + G KA++GF G+ + +I+ KG+ ++ + Sbjct: 67 EQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRD--TKGERFVHRVV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L I+ AI +P PK MRW + + RP+ L +L +D Sbjct: 125 VPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVH-WLVMLFGQD---- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I+ + Sbjct: 175 VVEAEIMGVKAGRISRGHRFLYDKPVSLSDPQNYIDVLQAAYVLVDPAARRARIVAEIEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 VARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI+++D A + +G RV+ R DA F Sbjct: 295 SLGKLTEKFIGIANIESNDV-AEVAKGYERVIRPRFSDAKFF------------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL + L RL V +HAK+GT ++V+R+ VL + IA I D L R Sbjct: 336 --FNEDLKQGLKAMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDPLLARRV 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + + + Sbjct: 392 ALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIEDAYRPRFSGDEIARSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R I+E++ D+ L ++ Sbjct: 452 KVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTIIESRFDLDLKVLLDQASD 511 Query: 532 ------------------------------------------QNLILFFHDRLKLYLHDR 549 + L F +RL+ Y D+ Sbjct: 512 WVAFATTIEQERHAQESVKQSKKEAAVKHSLPQVSDEKSARIEELYDFIVERLRGYYADK 571 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 I A+ + +L + + F + + E ++ KRI IL + E Sbjct: 572 GIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNIL-----RKAE 626 Query: 610 ISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 I + S L + AE L + T + ++D K Y + L + PI+ FFD+ Sbjct: 627 IKIPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDK 686 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN ++ +R NRL+LLQ + + V ++ + Sbjct: 687 VMVNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|217969300|ref|YP_002354534.1| glycyl-tRNA synthetase subunit beta [Thauera sp. MZ1T] gi|217506627|gb|ACK53638.1| glycyl-tRNA synthetase, beta subunit [Thauera sp. MZ1T] Length = 695 Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 192/607 (31%), Positives = 306/607 (50%), Gaps = 62/607 (10%) Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + DVL +V AI+ +P PK MRW + +++RP+ + + AE ++ Sbjct: 128 PGAKLADVLSGVVQDAIKALPIPKVMRWGDGDA-----TFVRPVHKLTLLHGAEVVPGRV 182 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 +DLD G + GHRF + + + + D Y L E V+ + RR I Sbjct: 183 LDLD-----SGRTSRGHRFMSRGDLSIATADAYEPTLLAEGKVIPNFAERRADIERQLLA 237 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ G L E DLL+E+ LVE V++G F+ ++L +P+E + LT++ NQK F Sbjct: 238 EAAKQGALLNEYADLLDEVAALVEHPTVYVGEFEAEFLAVPQECLILTMRANQKYFPLFD 297 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N F++VSN+Q +D IV GN+RVV RL DA F+++D+ Sbjct: 298 GAGKLLNRFLIVSNMQVADP-INIVAGNARVVRPRLSDARFFFEQDKK------------ 344 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+ RL VV+H K+G+Q ERV R+ L IA + DVA RA Sbjct: 345 --------QKLEARLPRL--APVVYHNKLGSQLERVERLEALAGAIAAQLHGDVAAAKRA 394 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+KADL T++V EFPELQG +G+ YA+ E DAI+ H +PR + +P ++ Sbjct: 395 ARLAKADLVTDMVGEFPELQGIMGRYYALADGEGEVVADAIQAHYQPRFAGDALPAGNVA 454 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADKLD L+ F+ I P+G KDP+ALRRA LG++RI++E + + L + I+ Sbjct: 455 AAVALADKLDALVGFFGIGMVPTGDKDPFALRRAALGVLRILMEAPLPLELPRLIDTAAA 514 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAI--LRPENDNLLTIVDLIKH 576 L F ++RLK L + +I+A+ LRP +L+ + Sbjct: 515 GFKPGLLTAEGFAAQLQDFMYERLKNLLRETGRDGAVIDAVLALRPARIDLVPAK--LAA 572 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDF 634 + F + + E + KRI IL E E P LL+ AEK L+ + + Sbjct: 573 VEAFRALPEAEALAAANKRIVNILKKAEGAPGE------PDLALLQEAAEKALFRQVVEV 626 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + ++ Y L + ++ FF+ V+V ++ R NR++LL + ++ Sbjct: 627 APLVRSHVANEDYTDALRALAGLRAAVDQFFEDVMVMAEEPLTRANRIALLAQLAGLMNQ 686 Query: 695 VINVQKI 701 V ++ ++ Sbjct: 687 VADISRL 693 >gi|94309391|ref|YP_582601.1| glycyl-tRNA synthetase subunit beta [Cupriavidus metallidurans CH34] gi|93353243|gb|ABF07332.1| glycine tRNA synthetase, beta subunit [Cupriavidus metallidurans CH34] Length = 707 Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 208/738 (28%), Positives = 346/738 (46%), Gaps = 79/738 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + + E + L L ++ + + TP RL + G+ Sbjct: 9 LLIELFTEELPPKALARLGEAFAQGLFDGLGARDLLEAGATVTPFATPRRLGALVSGVRR 68 Query: 62 HSPEK------------IEERLGPRVGAGKKAIDGFLRSTGLQTISDCQI--KKDPKKGD 107 +P++ ++ P GKK + +S G+ I D Q + K D Sbjct: 69 TAPDREQREKVLPLTVALDANGAPTAPLGKK-LAALAKSVGVAEI-DWQTLERASDGKAD 126 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 + + D L+ + + K+P PK M + + ++RP S++ + Sbjct: 127 AFFYRYTARGATLADGLQAALDETLTKLPIPKVMSYQRPDG--TTVHFVRPAHSLIALYG 184 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRN 226 AE I+ + + N+T GHRF + I++ Y LE V+ RR Sbjct: 185 AE-----IVPVSALGLQASNLTQGHRFLSQGTIEIPHAAEYAGLLESRGRVVASYADRRE 239 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I + A A +++ LL+E+ LVEW ++ F++ +L +P+E + LT++TN Sbjct: 240 RIRTALLKEAGAD--KVIMPDSLLDEVNSLVEWPVIYPCHFEEAFLAVPQECLILTMQTN 297 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F EG L N F++VSN+ A+D +I+ GN RVV RL DA F Sbjct: 298 QKYFALTDAEGHLRNRFLIVSNL-ATDTPQSIITGNERVVRPRLADAKFF---------- 346 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 F+ D K L R+ +L +VV+H KIG Q +RV R++ + +A ++A Sbjct: 347 ----------FDQDRKKTLASRVPQL--ANVVYHNKIGNQLDRVQRLQQIAGHLADAMNA 394 Query: 407 DVALVDRAIV-----LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 A VD+A L+KADL T++V EFPELQG +G YA +E A EH +P Sbjct: 395 TGAPVDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDEAEDVALACSEHYRP 454 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P +S V+LADKL+TLI W I +P+G KDP+ALRR LGI+R+++E + Sbjct: 455 RFAGDALPAGNVSTAVALADKLETLIGIWGIGLQPTGEKDPFALRRHALGILRMLIEKPL 514 Query: 522 DIPLSQFI---------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAI--LRPEN 564 +PL+ + + + F DR++ YL D+ + +EA+ LRP+ Sbjct: 515 ALPLNDVLGLTEQAFAGIAAVKPSREAITDFLFDRVRGYLKDKGYTTNEVEAVVSLRPQ- 573 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L I+ ++ + F + + E + KRI IL KK E + AE Sbjct: 574 -QLHDILARMEAVRTFAALPEAEALAAANKRITNIL----KKTDEAIGSVDVSLFQEAAE 628 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ I ++ + + L + + ++ FF+ V+V +D ++R NRL+L Sbjct: 629 GALHEAIERVRPGVEAAFAGGDFTAALRDLAQLRDAVDRFFNDVMVMAEDAKLRANRLAL 688 Query: 685 LQYIKNIILIVINVQKIV 702 L + + V ++ K+ Sbjct: 689 LATLHGLANRVADISKLA 706 >gi|161523777|ref|YP_001578789.1| glycyl-tRNA synthetase subunit beta [Burkholderia multivorans ATCC 17616] gi|189351462|ref|YP_001947090.1| glycyl-tRNA synthetase subunit beta [Burkholderia multivorans ATCC 17616] gi|160341206|gb|ABX14292.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans ATCC 17616] gi|189335484|dbj|BAG44554.1| glycyl-tRNA synthetase beta chain [Burkholderia multivorans ATCC 17616] Length = 699 Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 208/713 (29%), Positives = 343/713 (48%), Gaps = 63/713 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +P++ + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPDRQVREKVLP 81 Query: 74 ------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 G + L + G TI++ + +D K + + + D L+ Sbjct: 82 VSVALDAQGNPTAPLAKKLAALGRPNLTIAELERAQD-GKAEAFFINYSAAGATLADGLQ 140 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 141 AALDETLAKLPIPKVMTYQRPDG--SDVQFVRPVHRLTVL-----HDDRVVPVTAFGIDA 193 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 G+ T GHRF + + +Q Y L ++ V+ R+ I + A+ G +V Sbjct: 194 GDTTLGHRFLSDGLVAIQHASAYAETLRDKGRVIAHFGDRKETIRTQLNEHAN--GDTVV 251 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F+ Sbjct: 252 MPDALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIGGKLRSRFL 311 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 +VSNI+ G IV+GN RVV RL DA F+++D+ KP Sbjct: 312 IVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK--------------------KP 350 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL T Sbjct: 351 LAARVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADLLT 408 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E A EH +PR + +PT +S V+LADKL+ Sbjct: 409 DMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDTLPTTPVSTAVALADKLE 468 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------------- 529 T++ W I P+G KDP+ALRR LG++R+++E ++ + L + Sbjct: 469 TIVGIWGIGLAPTGEKDPFALRRHALGVLRLLIEKQLPLDLVSLLRTAYARFEGVPGVAE 528 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ FF DRL+ L +R ++A+L L +V + + EF A+ E Sbjct: 529 STDAIVAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRLDDLVARLDAVREFTRLAEAEAL 588 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 589 AAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAYTG 645 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 646 ALSALAALRAPVDTFFNDVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|269792671|ref|YP_003317575.1| glycyl-tRNA synthetase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100306|gb|ACZ19293.1| glycyl-tRNA synthetase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 691 Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 211/719 (29%), Positives = 349/719 (48%), Gaps = 77/719 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA E++ + L+ + Y + Y TP RL LY++ L+ Sbjct: 6 DLLFEIGTEEIPASFLAFGLEEVKRLAKEELEAASLRYGAIESYGTPRRLALYVRDLAER 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G K GF +S G++ D +D K AV+R+ Sbjct: 66 QDDVEEEIRGPMWSQAFDPNGHPTKVAVGFAKSRGVEV--DALEMRDVKGVPYAFAVVRR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L I+ + ++ +PK+M WS P F+ RP++ ++ + +++ Sbjct: 124 EGQETSSLLPDILSRILHRLVFPKNMYWS---DPSVRFA--RPIRWLVALW-----GDQV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + + G ++ GHRF ++++S Y+ L V+ P RR +L+ L Sbjct: 174 IPVTVGNVTSGRVSRGHRFLGKRAVEIRSAGEYLDALYGEFVIAHPGKRREKMLSAIASL 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + +G ++ D DL+EE LVE+ F G+FD +L +P+E++ T+K +Q+ F R Sbjct: 234 ENEMGGKVELDPDLVEENCNLVEYPVPFFGTFDASFLEMPQEVLCTTMKKHQRYFPVRDS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G LA CF+ VSN QA+ + +GN RV+ ARL DA FW D+ L+S E AL Sbjct: 294 KGNLAPCFVGVSNNQATL-MQNVREGNERVLRARLSDASFFWDEDRKK--GLASRVE-AL 349 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV----LGKKIAQLIDADVALV 411 K +VV+ K+G+ ++V +R LG+++ ++D + L+ Sbjct: 350 K-------------------NVVYQEKLGSVYDKVQSVRSVALWLGEQLG-MVD-KLNLL 388 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA +LSKADL T +V EFPELQG +G+EYA E A+ E PR +++P+ Sbjct: 389 DRAALLSKADLVTSMVYEFPELQGVMGREYARCSGEAPEVALALYEQYLPRFAGDSLPSQ 448 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 I + +A++ T++ + +P+ S+DP+ LRRA I I+ +D+ + Q Sbjct: 449 PIGAVLGVAERAYTIVAIHHVGLEPTSSQDPHGLRRAARCINEILWGLDLDVAVDQLFLK 508 Query: 532 QNLIL------------FFHDRLKLYLHDRDIRHDLIEAIL-----RP-ENDNLLTIVDL 573 +L FF RL + L +R H L+ + RP + LL +++ Sbjct: 509 VAEVLGADRPVVEKAMEFFRQRLLVQLRERGFSHGLVSLGVDCIWSRPLQALKLLEVLEG 568 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K + F S + +A R+ IL ++ K R S + + LE L AV Sbjct: 569 LKGEDWFGS------LVTAAIRVRNIL-LKAKDERIASEMDGAEGVELELLNELRAVR-- 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + E++ +HQ+ LLH + P+ FFD V+V D EVR RL +L+ + + Sbjct: 620 --PCLDEALGEFDWHQVARLLHRLEGPVRAFFDGVMVMDQDPEVRARRLGILKEAQGLF 676 >gi|28896795|ref|NP_796400.1| glycyl-tRNA synthetase subunit beta [Vibrio parahaemolyticus RIMD 2210633] gi|153839057|ref|ZP_01991724.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|260363493|ref|ZP_05776326.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus K5030] gi|260876552|ref|ZP_05888907.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|260897313|ref|ZP_05905809.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|260901407|ref|ZP_05909802.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|32130158|sp|Q87TP8|SYGB_VIBPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28805003|dbj|BAC58284.1| glycyl-tRNA synthetase, beta chain [Vibrio parahaemolyticus RIMD 2210633] gi|149747440|gb|EDM58394.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|308087818|gb|EFO37513.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|308090379|gb|EFO40074.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|308107205|gb|EFO44745.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|308113553|gb|EFO51093.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus K5030] Length = 688 Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 203/699 (29%), Positives = 328/699 (46%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAALAES 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 64 QSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQADRMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASSRTIRGHRFMGEKEFTIDSAEQYPAILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSNGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 449 TAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +Q++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRELEAAESLAAANKRVGNILA---KFDGELAEEIDLALLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|37678204|ref|NP_932813.1| glycyl-tRNA synthetase subunit beta [Vibrio vulnificus YJ016] gi|61216582|sp|Q7MQI8|SYGB_VIBVY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|37196943|dbj|BAC92784.1| glycyl-tRNA synthetase, beta subunit [Vibrio vulnificus YJ016] Length = 693 Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 208/705 (29%), Positives = 334/705 (47%), Gaps = 69/705 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ H Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTALAEH 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 QADKIVEKRGPAVSAAFDAEGNATKAAQGWARGCGITVDQAERMITD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + D++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTADIVVELAAKALAGLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + + GHRF ++S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IQGEILGVASDRVIRGHRFMGEREFTIESAEQYPAILEERGKVMADYEMRKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G + DL+EE+ LVEW V F++++L +P E + T+K +QK F T Sbjct: 232 AAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFPVYT 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 292 EDKQLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFFFNTDRK------------ 338 Query: 355 LKFNLDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 SK +D RL ML+ +F ++GT ++ RI L IA+ I ADV R Sbjct: 339 -------SKLID----RLPMLENAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR +++P+N + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDDLPSNGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAK 506 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +Q +I F R + + D D+I+A+L Sbjct: 507 SLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 567 VKAVSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKVLAENVEV 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 624 MTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 668 >gi|194367754|ref|YP_002030364.1| glycyl-tRNA synthetase subunit beta [Stenotrophomonas maltophilia R551-3] gi|194350558|gb|ACF53681.1| glycyl-tRNA synthetase, beta subunit [Stenotrophomonas maltophilia R551-3] Length = 691 Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 207/712 (29%), Positives = 333/712 (46%), Gaps = 69/712 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + + R TP RL + L G+ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVVDGLRKRGVALELGDARPLSTPRRLAVLLPGVGL 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 PE+ E LGP + G KA+ GF G+ K KG+ ++ Sbjct: 67 EQPEQHSEVLGPYLNIALDAEGLPTKALQGFAAKAGIDWT--ALEKTSDNKGERFVHRAV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P +L I+ AI +P PK MRW A+ + RP ++ + A Sbjct: 125 TPGASTASLLPEILREAIAAMPIPKPMRWGD-----HAWGFARPAHWLVLLHGA-----N 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +L + G ++ GHRFH + + Y+ L A VL+DP RR I+ + Sbjct: 175 VVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVLVDPSERRARIVAEVEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 AAAKAGGSARITDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI++ D A + +G RV+ R DA F+ D LK+ Sbjct: 295 DSGTLTEKFIGIANIESKDV-AEVAKGYERVIRPRFADAKFFFDED---------LKQGL 344 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L V + AK+G+ ++V+R+ L + IA + AD A RA Sbjct: 345 VSMGDGLKT-------------VTYQAKLGSVADKVARVAALAEVIAPQVGADAAQAKRA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL + +V EFPELQG G+ YAV E AI+E +PR +++ + + Sbjct: 392 AQLAKNDLQSRMVNEFPELQGIAGRHYAVAGGEAEEVALAIDEAYQPRFGGDDIALSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +++A+++DTL +A KP+G+KDP+ALRR LG+ R I+E+ ++ L + N Sbjct: 452 KVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRALLASANA 511 Query: 535 IL--------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 L F DRLK Y D+ + A+ + +L + + F Sbjct: 512 GLAARNVQADVGELYDFILDRLKGYYSDKGVPATHFNAVAELKPTSLYDFDRRLDAIGTF 571 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL----YAVISDFGT 636 + + E + KRI IL K +I +I P L +AE+ L A I D GT Sbjct: 572 AALPEAEALAAANKRIRNIL---RKAEGDIPGQIDPALLQEDAERALAEAVTAAIDDTGT 628 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +Q+ K Y + L + + ++ FFD V+VN DD +R NRL+LL + Sbjct: 629 SLQQ----KDYVAVLARLARLRQQVDAFFDGVMVNADDLALRGNRLALLTML 676 >gi|297516327|ref|ZP_06934713.1| glycyl-tRNA synthetase subunit beta [Escherichia coli OP50] Length = 579 Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 180/594 (30%), Positives = 285/594 (47%), Gaps = 52/594 (8%) Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I + Sbjct: 18 EALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVIPATI 67 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAV 239 I + GHRF + + D Y L E V+ D E R+ I DA A + Sbjct: 68 LGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKI 127 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G L Sbjct: 128 GGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKL 187 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 FI V+NI++ D I+ GN +VV RL DA F FN Sbjct: 188 LPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFF--------------------FNT 226 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +LSK Sbjct: 227 DRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSK 284 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ +++ Sbjct: 285 CDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAI 344 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 345 ADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDK 404 Query: 532 -------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 ++I F R + + D D I+A+L +K ++ F + Sbjct: 405 LTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLD 464 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 465 AAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTE 521 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 522 GRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 575 >gi|37521215|ref|NP_924592.1| glycyl-tRNA synthetase subunit beta [Gloeobacter violaceus PCC 7421] gi|35212211|dbj|BAC89587.1| glycyl-tRNA synthetase beta chain [Gloeobacter violaceus PCC 7421] Length = 724 Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 211/742 (28%), Positives = 338/742 (45%), Gaps = 76/742 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L + L E + + ++ + TP RL + +GL Sbjct: 1 MATFLLEIGTEELPASFVPGALAQLEARVRSALAEAQITAETLKLFGTPRRLAVLAEGLP 60 Query: 61 PHSPEKIEERLGP--RVG--AGKKAI---DGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ EE GP RV AG + +GF R G+ + + ++ +KG+V AV Sbjct: 61 ERQPDREEELKGPPARVAFDAGGRPTAQAEGFARKAGV-AVGELSVRAT-EKGEVVFAVR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R R + +L +P I + P+ MRW+ + RP++ ++ ++ +E Sbjct: 119 RIEGRPVTQLLAEQIPEWITGLEGPRLMRWADGD-----LRFSRPIRWLVALVDSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ +++ + G + GHR P PI++ + Y L A VL DPE RR I Sbjct: 170 -VLPVEMAGVSAGRTSRGHRVLHPEPIELATAADYPAALTAAFVLADPEVRRERIRTGIA 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +G E LLEE+ LVEW G F+ ++L LP +I+ + T+Q+ F Sbjct: 229 AVAEQLGAEAAVPAALLEEVNFLVEWPTAVAGQFESEFLSLPAPVIKTEMITHQRYFPLH 288 Query: 294 TREG---VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI VSN I +GN RV+ ARL D F++ D+ Sbjct: 289 -QPGDPEALIPRFITVSNGDPRYS-ELIARGNGRVIRARLADGRFFFEEDRK-------- 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +PL++ + +L V F +G+ ERV R+ + + L Sbjct: 339 ------------QPLEKFLGKLQ--SVTFQESLGSVAERVERLEAIALWLCGHLGLGGEQ 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 LV R L KADL T++V EFPELQG +G++YA L E C I EH +PR ++ Sbjct: 385 TRLVARTAHLCKADLATQMVYEFPELQGLVGRDYARLDGEEPLVCAGIAEHYQPRNVEDD 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + V +AD+L+TL+ + + PSGS DP+ALRRA L ++RI + ++ L + Sbjct: 445 LPASLTGQVVGIADRLETLVGIFGLGMLPSGSSDPFALRRAALTVVRIGWDTDFELDLVE 504 Query: 528 --------FIEDQ-----------NLILFFHDRLKLYLHDRD-IRHDLIEAILRPENDN- 566 F+ Q L +F RL L +RD + +DL+ A+L + Sbjct: 505 ALGFTVELFVSRQLLKQPADTLLEQLCDWFAQRLYGLLVERDGLDYDLVLAVLGAVDTGY 564 Query: 567 ----LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLE-ISPQYLL 620 L + L L+ ++ K + ++ + K +++LE Q + Sbjct: 565 TRRALANLRALKLRLDTLVAARKSGLLAQIYETAVRVARLAGKAGIGDLTLEHFDAQLVA 624 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 AE L + F + + + Y + L + + FFD V+V V D +R N Sbjct: 625 DPAEAALREAVQKFAATAEAAEAQEDYPALLGALGELAPQVSCFFDAVMVMVPDETLRTN 684 Query: 681 RLSLLQYIKNIILIVINVQKIV 702 RL LL I N +V ++V Sbjct: 685 RLRLLAVIDNNARRCFDVTQVV 706 >gi|15838553|ref|NP_299241.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa 9a5c] gi|11387205|sp|Q9PC26|SYGB_XYLFA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|9107061|gb|AAF84761.1|AE004015_4 glycyl-tRNA synthetase beta chain [Xylella fastidiosa 9a5c] Length = 722 Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 203/754 (26%), Positives = 348/754 (46%), Gaps = 96/754 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + ++ L++ G++ + + TP RL + L ++ Sbjct: 7 LLIELGTEELPVNALPNLSRAFFEGVLAGLEKRGIVVDHGEAKSLSTPRRLAVLLTAVAV 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP + G KA++GF G+ + +I+ KG+ ++ + Sbjct: 67 EQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRD--TKGERFVHRVV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L I+ AI +P PK MRW + + RP+ L +L+ +D Sbjct: 125 VPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVH-WLVMLLGQD---- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I+ + Sbjct: 175 VVEAEIMGVKAGRISRGHRFLYDKPVSLSDPQNYIDVLQAAYVLVDPAARRARIVAEIEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 VARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI+++D A + +G RV+ R DA F Sbjct: 295 SLGKLTEKFIGIANIESNDV-AEVAKGYERVIRPRFSDAKFF------------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL + L RL V +HAK+GT ++V+R+ VL + IA I D L R Sbjct: 336 --FNEDLKQGLKAMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDPLLARRV 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + + + Sbjct: 392 ALLSKNDLQSRMVNEFPELQGIAGHHYALISGELPEVAMAIEDAYRPRFSGDEIARSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R ++E++ D+ L ++ Sbjct: 452 KVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTMIESRFDLDLKVLLDQASD 511 Query: 532 ------------------------------------------QNLILFFHDRLKLYLHDR 549 + L F +RL+ Y D+ Sbjct: 512 WVAFATTIEQERHAQESVKQSKKEAAVKHSVPQVSDEKSARIEELYDFIVERLRGYYADK 571 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 I A+ + +L + + F + + E ++ KRI IL + E Sbjct: 572 GIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNIL-----RKAE 626 Query: 610 ISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 I + S L + AE L + T + ++D K Y + L + PI+ FFD+ Sbjct: 627 IKIPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDK 686 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN ++ +R NRL+LLQ + + V ++ + Sbjct: 687 VMVNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|254251460|ref|ZP_04944778.1| Glycyl-tRNA synthetase beta subunit [Burkholderia dolosa AUO158] gi|124894069|gb|EAY67949.1| Glycyl-tRNA synthetase beta subunit [Burkholderia dolosa AUO158] Length = 699 Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 203/712 (28%), Positives = 345/712 (48%), Gaps = 61/712 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +P++ + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPDRQVREKVLP 81 Query: 74 ------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDVLKT 126 G + L + G ++ ++++ K + + + D L+ Sbjct: 82 VSVALDAEGKPTAPLAKKLAALGFPNLTVAELERAQDGKAEAFFVNYSAAGATLADGLQA 141 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + + K+P PK M + + ++RP+ + + ++++ + I G Sbjct: 142 ALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HDDRVVPVTAFGIDAG 194 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 + T GHRF + + +Q Y L ++ V+ R+ I + A+ G +V Sbjct: 195 DTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRKETIRTQLNEHAN--GDTVVM 252 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F++ Sbjct: 253 PESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSRFLI 312 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 VSNI+ G I++GN RVV RL DA F+++D+ KPL Sbjct: 313 VSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK--------------------KPL 351 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 +R+ L +VV+H K+G+ ERV R+ L +IA I ADVA RA L+KADL T+ Sbjct: 352 AERVPLL--ANVVYHNKLGSTLERVERLEALAGEIAPAIGADVAHAKRAARLAKADLLTD 409 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EFPELQG +G YA E A EH +PR + +PT +S V+LADKL+T Sbjct: 410 MVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADKLET 469 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN------------ 533 ++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 470 IVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFANVPGVAES 529 Query: 534 ---LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 530 TDAIFAFFIDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTRLAEAEALA 589 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 590 AANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAYTGA 646 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 647 LSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|71897929|ref|ZP_00680134.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|71732173|gb|EAO34228.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] Length = 722 Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 204/754 (27%), Positives = 345/754 (45%), Gaps = 96/754 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + ++ L+ G++ + + TP RL + L ++ Sbjct: 7 LLIELGTEELPVNALPNLSRAFFEGVLAGLERRGIVVDHGEAKSLSTPRRLAVLLTAVAV 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP + G KA++GF G+ + +I+ KG+ ++ + Sbjct: 67 EQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRD--TKGERFVHRVV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L I+ AI +P PK MRW + + RP+ L +L +D Sbjct: 125 VPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVH-WLVMLFGQD---- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I+ + Sbjct: 175 VVQAEIMGVKAGRISRGHRFLYDKPVSLSGPQNYIDVLQAAYVLVDPAARRARIVAEIEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 VARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI+++D A + +G RV+ R DA F Sbjct: 295 SLGKLTEKFIGIANIESNDV-AEVAKGYERVIRPRFSDAKFF------------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL + L RL V +HAK+GT ++V+R+ VL + IA I D L R Sbjct: 336 --FNEDLKQGLKVMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDPLLARRV 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + + + Sbjct: 392 ALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIEDAYRPRFSGDEIARSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R I+E++ D+ L ++ Sbjct: 452 KVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTIIESRFDLDLKVLLDQASD 511 Query: 532 ------------------------------------------QNLILFFHDRLKLYLHDR 549 + L F +RL+ Y D+ Sbjct: 512 WVAFATTIEQERHAQESVKQSKKEAAVKHSVPQVSDEKSARIEELYDFIVERLRGYYADK 571 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 I A+ + +L + + F + + E ++ KRI IL + E Sbjct: 572 GIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNIL-----RKAE 626 Query: 610 ISLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 I + S L + AE L + T + ++D K Y + L + PI+ FFD+ Sbjct: 627 IKIPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDK 686 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN ++ +R NRL+LLQ + + V ++ + Sbjct: 687 VMVNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|320157808|ref|YP_004190187.1| glycyl-tRNA synthetase subunit beta [Vibrio vulnificus MO6-24/O] gi|319933120|gb|ADV87984.1| glycyl-tRNA synthetase beta chain [Vibrio vulnificus MO6-24/O] Length = 693 Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 208/705 (29%), Positives = 333/705 (47%), Gaps = 69/705 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ H Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTALAEH 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 QADKIVEKRGPAVSAAFDADGNATKAAQGWARGCGITVDQAERMITD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + D++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTADIVVELAAKALAGLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IQGEILGVASDRVIRGHRFMGEREFTIDSAEQYPAILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G + DL+EE+ LVEW V F++++L +P E + T+K +QK F T Sbjct: 232 AAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFPVYT 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 292 EDKQLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFFFNTDRK------------ 338 Query: 355 LKFNLDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 SK +D RL ML+ +F ++GT ++ RI L IA+ I ADV R Sbjct: 339 -------SKLVD----RLPMLENAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR +++P+N + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDDLPSNGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 448 SAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAK 506 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +Q +I F R + + D D+I+A+L Sbjct: 507 SLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 567 VKAVSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKVLAENVEV 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 624 MTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 668 >gi|328471247|gb|EGF42149.1| glycyl-tRNA synthetase subunit beta [Vibrio parahaemolyticus 10329] Length = 688 Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 203/699 (29%), Positives = 328/699 (46%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAALAES 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 64 QSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQADRMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASSRTIRGHRFMGEKEFTIDSAEQYPAILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 DNKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSNGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 449 TAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +Q++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRELEAAESLAAANKRVGNILA---KFDGELAEEIDLALLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|269965270|ref|ZP_06179391.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 40B] gi|269830071|gb|EEZ84299.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 40B] Length = 688 Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 203/699 (29%), Positives = 328/699 (46%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAALADS 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 64 QSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIGADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSNGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 449 TAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +Q++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDRLTNENVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ EI L +AEK L + ++ Sbjct: 568 FRELEAAESLAAANKRVGNILA---KFDGELAEEIDLALLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|329122051|ref|ZP_08250659.1| glycyl-tRNA synthetase beta subunit [Dialister micraerophilus DSM 19965] gi|327466858|gb|EGF12374.1| glycyl-tRNA synthetase beta subunit [Dialister micraerophilus DSM 19965] Length = 682 Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 205/733 (27%), Positives = 365/733 (49%), Gaps = 87/733 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP- 61 + LLEI +EE+PA++ E L+ + +K + + +++ Y TP RL + ++ S Sbjct: 4 NLLLEIGTEEMPAKIMPGLVEQLNQLANIEMKNARLSFDDVKVYATPRRLAVIIEKSSEI 63 Query: 62 HSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 S E + +R GP + A +A+ GF +S I+K K+G+ A + Sbjct: 64 QSDENLRKR-GPSIKAAFDKEGNPTRALQGFAKS------QKVDIEKIEKEGEYTWANIT 116 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + I++VL I I + + +SM W T +IRP++ ++ + E+ Sbjct: 117 NKGKKIQEVLPVIFKNLISNLNFSRSMNWGTEKE-----RFIRPIRWLVAM-----CDEE 166 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II ++ + GNI+ GHRF A +++++ + Y ++++ V++D + RR I+ + Sbjct: 167 IIPVEFAHVKSGNISRGHRFLASDHVEIKNAESYKETMKKSFVIVDQDERRQMIIEGLKK 226 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ++ + L E+K LLEEI LVE+ G D+K+L LP + ++ +Q+ + R Sbjct: 227 VSEKLNGILWENKGLLEEINYLVEYPTALYGKIDEKFLQLPVPAVVTPMRDHQRYYPLRN 286 Query: 295 REGVLANCFILVSNIQASDGGAAIVQ----GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L F+ V N GG ++ GN RV+ ARLEDA F+ D++ +L + Sbjct: 287 KNGKLMPYFLTVRN-----GGTQSLENVKVGNERVLRARLEDAQFFF--DEDRKKSLENF 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +E+ + N + +GT ++ +R+ L + A+ L D + Sbjct: 340 RENLKRIN--------------------YQEGMGTMLDKANRLSALTELFAKEWKLSDEE 379 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + RA LSK+DL T +V EF ELQG++GKEYA+L NE + +AI E PR + Sbjct: 380 AKDLKRASYLSKSDLATHMVTEFTELQGEMGKEYALLDNEKETVANAIFEQYLPRFSGDV 439 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + I +SLADKLD L + P+GS+DP+ALRR T+GI+ I+ + KI ++ Sbjct: 440 LPKSNIGRALSLADKLDNLTATFLRGLIPTGSQDPFALRRQTIGIVNILNDGKIHWDITS 499 Query: 528 FI-----------EDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I + +N +L F R+K+ + D I +D+++A+ +D++ I Sbjct: 500 GIKKALDLLSDDEKQKNKVLLQILEFIRQRVKVIMSDLKIDYDIVDAV----SDDMTDIY 555 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA--EKRLYA 629 + + N E+ L + + ++ I + KN + Q L EA EK LY Sbjct: 556 SVFRKANAVIEMNVKEEIELR-QVVTRLSHITKDKN-----PVKIQESLFEANEEKELYK 609 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + ++ + Y ++ + L ++ + I F D V+V V++ +V++NR+SLL + Sbjct: 610 AYIEIADKLKAECEAHEYIKMFEPLKNLVKYINAFLDSVMVMVENEDVKNNRISLLIEVL 669 Query: 690 NIILIVINVQKIV 702 N+ + + K+V Sbjct: 670 NLYKMWGDFSKLV 682 >gi|86157732|ref|YP_464517.1| glycyl-tRNA synthetase subunit beta [Anaeromyxobacter dehalogenans 2CP-C] gi|123736895|sp|Q2IQJ5|SYGB_ANADE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|85774243|gb|ABC81080.1| glycyl-tRNA synthetase beta chain [Anaeromyxobacter dehalogenans 2CP-C] Length = 701 Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 208/730 (28%), Positives = 344/730 (47%), Gaps = 69/730 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A L L L + + + +R TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPGALRQLEDDLAKALADARLAHGEVRAVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G A GF RS G++ +S + PK V + + Sbjct: 61 PKQTDARTEAFGPPVAQAYDAEGKPTPAATGFARSQGVE-VSALVRAQTPKGERVAVTKV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K R E VL ++ + + + K+MR S ++ RP++ ++ +L Sbjct: 120 EK-GRKAEQVLPALLERLVAGLRFRKAMR-----SRFDEVTFARPVRWMVALLGG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSL-DHYIRDLEEAMVLLDPECRRNAILNDA 232 + + + E+ G +TYGHRF AP I ++ D Y+ L A VL DPE RR A+L + Sbjct: 169 RPLKVRHGEVASGKVTYGHRFLAPKAIALKGTPDDYLAKLRRAHVLADPEERRAALLAEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R G ++ +D L+E+++ LVE +G F++ L LP E++ ++ +Q+ F Sbjct: 229 ARAGKEAGGKVRDDPALVEQVLYLVEEPSAVVGEFERSNLELPPEVVISEMRNHQRYFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS + D A G RV+ ARL DA F++ D+ Sbjct: 289 VDGKGRLKNRFVAVSATRVKDPAVA-RHGYERVLRARLADARFFFEEDRK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L +R+ D+ F AK+G++ +R RI + +A+ + D + D Sbjct: 338 ----------RKLHERIE--DLGRRTFQAKLGSELDRAQRIGAVASGLARALGKDALVAD 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A L+K DL T +V EFPELQG +G YA L+ DAIE+H KP G E +P Sbjct: 386 LLEASRLAKVDLNTGMVGEFPELQGTMGAHYARLEGLKPEIADAIEDHYKPIGAAEEMPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V++AD+L +L+ + EK +G+ DP+ LRRA +GI+RI++ + L+ +E Sbjct: 446 SDLGALVAVADRLHSLVGIIGVGEKATGAADPFGLRRAAIGILRIVIARGYHLSLATAVE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F R++ +R DL+EA+L +D+ +VD Sbjct: 506 QTLDALAGVKLAAGRALVAEQVLDFLRGRVRAAWTER-FDADLVEAVLAAGSDD---VVD 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E + AK S F+ +A I+EK + + P L AE+ L A + Sbjct: 562 ARRRL-EALAEAKARPDFGSLAVAFKRVANIQEKAGGPGAAAVDPALLRDPAEQDLLAAL 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + Y + + ++ + FFD VLV +D +R NRL L++ + + Sbjct: 621 EKVEQEVGARRAARDYPAVLRTVATLEPAVARFFDDVLVMAEDPALRANRLGLMRRVGAL 680 Query: 692 ILIVINVQKI 701 + + +KI Sbjct: 681 FSDLADFRKI 690 >gi|304403966|ref|ZP_07385628.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus curdlanolyticus YK9] gi|304346944|gb|EFM12776.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus curdlanolyticus YK9] Length = 693 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 203/730 (27%), Positives = 339/730 (46%), Gaps = 71/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI EE+PAR A L L L E + + + Y TP RL + ++ ++ Sbjct: 4 DLLFEIGLEEVPARFVRAAVNQLRDKLAKWLDESRISHGEVEAYATPRRLAVLVREVAEK 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF +S G++ Q+ G Y+ K Sbjct: 64 QSDVNEEVKGPSRKIAQDAEGQWSKAALGFAKSQGVEP---EQLFFKELAGVEYV-YGNK 119 Query: 116 PKRLIE--DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +E VL + + + +PKSMRW + ++RP+K ++ + Sbjct: 120 SSVGVETASVLTEGLTAIVTSMTFPKSMRWGSYD-----LKFVRPIKWLVAMF-----GS 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ L+L + GN+T GHRF +++ Y+ L V+ D R I+ Sbjct: 170 QIVPLELAGVQSGNVTRGHRFLGAE-TTIETPSSYVEALRAQHVIADIAEREAEIVRQIE 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G E+ +DLLEE++ LVE V G+FD +L +P+E++ +++ +Q+ F Sbjct: 229 ALAQEQGWEIAVKEDLLEEVLFLVETPSVLFGTFDPSFLQIPQEVLITSMREHQRYFPVL 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L F+ V N + + +GN +V+ ARL DA F+ DQ Sbjct: 289 DKAGKLLPFFVTVRNGDRTSLD-VVAKGNEKVLRARLSDAKFFYAEDQ------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 L +S L + + +V+H ++GT ++V RIR + ++A + AD VA Sbjct: 336 ----KLAISDALQK------LETIVYHEELGTVADKVRRIRAIADQMAAHVQADASAVAD 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA +SK DL T++V EFPELQG +G++YA E + AI EH +PR + P Sbjct: 386 ISRAADISKFDLVTQMVYEFPELQGIMGEDYARKAGEREAVAVAINEHYQPRFAGDRAPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +SL+DK+DT++ ++I P+GS+DPYALRR GI++ IL + + L + Sbjct: 446 SLAGAVISLSDKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQTILAQGLPLALGDLFD 505 Query: 531 ------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + L FF R+K L ++ +R+D+++A++ D+L V+ Sbjct: 506 IALAVHEQRGLKRPAAEVRKELYEFFGLRVKNVLTEQGVRYDVVDAVMAAGFDDLKLTVE 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L + + +F + ++ + K E+ + P AE+ LY Sbjct: 566 RASVLIGRAAGEEKNEFKTVVEAFNRVNNLAAKAESEV---VDPALFAEPAEQALYEAWK 622 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 E + +LL ++ EPI +FD V+V +VR NRL+ L + + I Sbjct: 623 TAHPAYAERFRNGDIAGALELLAALKEPITAYFDSVMVMAQQEDVRRNRLATLAGLSSDI 682 Query: 693 LIVINVQKIV 702 + + + K+V Sbjct: 683 VKLADFAKLV 692 >gi|313633241|gb|EFS00110.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri FSL N1-067] Length = 688 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 214/723 (29%), Positives = 350/723 (48%), Gaps = 83/723 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + E L + L+E + + ++ + +P RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAQYVTSSVEQLKKRMRDWLEENQIAFAEIKTFSSPRRLTVLVEDMAEE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q I + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDEEGNWSKAALGFAKS---QKIEPADLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPVAIQKV----PWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 K +I + ++P A+QKV +P SM W +IRP+K ++ + E Sbjct: 118 KKEVIGEXXXALLP-ALQKVVTSMTFPVSMHWGNND-----LRYIRPIKWLIAMFGQE-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 II ++ + N + GHRF Q D Y L E V++D R+ AI Sbjct: 170 ---IIPFEITGVTTSNTSRGHRFLGKTTTIKQPSD-YQNALLEQFVVVDATERKEAISGQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS ++ ED DLLEE+ LVE+ V G+F+++YL LPEE++ T+K +Q+ F Sbjct: 226 LKELASLENWQIKEDADLLEEVTNLVEYPTVLAGNFEEEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +++G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQDGKLLPHFVTVRN-GNHENIETVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L + + +A+L ++VFH K+GT E++ R++ + IA +D AD Sbjct: 334 ---------LKMTIAEAVAKLP--NIVFHEKLGTLTEKMKRVQKVALMIADYLDWKEADK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P+ + Sbjct: 383 EDIIRLTDIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKTAIATAIREHYLPKSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP---- 524 P + +ADKL+T + F+ +N P+GS DP+ LRR+ G +RII N DIP Sbjct: 443 PQTDLGSXXXIADKLETFVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLEL 502 Query: 525 LSQFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 LS+ ++ + + F +RL++ L + IRHD+I+A++ + + + Sbjct: 503 LSRIVDMERVEGAVELPSDDVKREVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +VD + LN+ S E F + + + ++L I +K E +E+ P E E L+ Sbjct: 563 LVDRAQILNKHVES---EWFRPTVEALTRVLNISKK--YEEGVEVDPALFENEYEHALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R L +I + +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKYDYASLTILERLKAFAGLRTTIDD----YFDNTLVMSDNLELKNNRLALLFELA 673 Query: 690 NII 692 + I Sbjct: 674 SFI 676 >gi|134296894|ref|YP_001120629.1| glycyl-tRNA synthetase subunit beta [Burkholderia vietnamiensis G4] gi|134140051|gb|ABO55794.1| glycyl-tRNA synthetase beta chain [Burkholderia vietnamiensis G4] Length = 699 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 207/713 (29%), Positives = 345/713 (48%), Gaps = 63/713 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +P++ + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPDRQVREKVLP 81 Query: 74 RVGA----GKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 A GK + L TI++ + D K + + + D L+ Sbjct: 82 VSVALDAEGKPTAPLAKKLAALGHPDLTIAELERAHD-GKAEAFFVNYSAAGATLADGLQ 140 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + ++K+P PK M + + ++RP+ + + ++++ + + Sbjct: 141 AALDETLEKLPIPKVMTYQRPDG--TDVKFVRPVHRLTVL-----HDDRVVPVAAFGVDA 193 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 G+ T GHRF + + +Q Y L ++ V+ RR I + A+ G +V Sbjct: 194 GDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHAN--GDTVV 251 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F+ Sbjct: 252 MPDALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIAGKLRSRFL 311 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 +VSNI+ G I++GN RVV RL DA F+++D+ KP Sbjct: 312 IVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK--------------------KP 350 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L +R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL T Sbjct: 351 LAERVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADLLT 408 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E A EH +PR + +PT +S V+LADKL+ Sbjct: 409 DMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADKLE 468 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN----------- 533 T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 469 TIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFEQVPGVAE 528 Query: 534 ----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 529 ATDAIFAFFMDRLRGLLRERGYTAGEVDAVLSLNPTRVDDLVARLDAVREFTRLAEAEAL 588 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KRI IL +K ++ + P L+ AEK L+ ++ H+Q +D + Y Sbjct: 589 AAANKRISNIL---KKSEGGVNGAVQPALLVEAAEKALHEQLAAVTPHVQSQLDARAYTG 645 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 646 ALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|91228339|ref|ZP_01262267.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 12G01] gi|91188099|gb|EAS74403.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 12G01] Length = 688 Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 202/699 (28%), Positives = 328/699 (46%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAALADS 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 64 QSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIGADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSNGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 449 TAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +Q++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ +I L +AEK L + ++ Sbjct: 568 FRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|212702604|ref|ZP_03310732.1| hypothetical protein DESPIG_00630 [Desulfovibrio piger ATCC 29098] gi|212674045|gb|EEB34528.1| hypothetical protein DESPIG_00630 [Desulfovibrio piger ATCC 29098] Length = 696 Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 211/725 (29%), Positives = 332/725 (45%), Gaps = 77/725 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI SEE+PAR +L+ L+E V + + TP R + ++ ++ Sbjct: 1 MATFVLEIGSEELPARFLAGEEAELAARFTAALQEASVEHGALHTMSTPRRAIVIIEDVN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E+ EE GP V G KA++GF R+ G+ D + +KG+ Y+AV Sbjct: 61 PVQQEREEEVAGPPVRVAFAADGKPTKALEGFARTNGVSV--DDVYRITTEKGE-YVAVR 117 Query: 114 RK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ + D+L I P I +P+ K MRW + + ++ RPL+ I+ +L Sbjct: 118 KRIGGAAVADLLAEICPAVITSLPFGKRMRWGS-----NTLAYARPLRWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLL-DPECRRNAILND 231 + ++ + + G T GHR H P V + + L + L D RR I+ Sbjct: 168 DAVVPFTVGPVASGRETMGHRIHGHGPFSVAHANELLAVLADKGGLTPDAADRRKVIVEG 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A+A+G +++ LL E+ GL E + FD YL +P E++ +++++QK F Sbjct: 228 GDAQAAAIGGKVLWRDGLLGEVQGLTEHPVPLLADFDPSYLEVPREVLLTSMESHQKSFG 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F+ V NI D + + G RV+ ARLEDA FW Sbjct: 288 IEAADGTLMPHFLTVLNISPEDM-SLVKHGWERVLRARLEDARFFW-------------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-LIDADVAL 410 + DL D + +LD V+F ++GT GE+ R+ L + +A+ + V+ Sbjct: 333 ------HADLRDNFDYWLEKLD--HVIFIGRLGTMGEKTRRLEALCRWLAENVAQGKVSA 384 Query: 411 VD--RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 D RA LSKADL T +V EF LQG +G YA + E A+ E P GP V Sbjct: 385 EDAARAGRLSKADLVTGMVGEFDTLQGIMGGIYAERKGETPVVAQALREQYLPAGPDSPV 444 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +S+ADK DTL+ + + P+G+ DP ALRR LGIIRI LE + + Q Sbjct: 445 PASLCGALLSMADKADTLVGCFGLGMIPTGAADPNALRRCALGIIRIGLEFDLHFDIRQL 504 Query: 529 IEDQN------------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + L+ FF R++ Y +R L++A L ++ Sbjct: 505 FARAHELYGDRQWKLAPQEALDKLLDFFAGRVRNYWQNRGEDSLLVDAALGAGVADVCQC 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLY 628 + L +F A + + + KR+ I+ K+ L + Q LL+ AEK L Sbjct: 565 GARLAALAQFSKEAGYAEAVQTFKRVANIV---RKQGAAEQLAAAWQADLLQEDAEKALA 621 Query: 629 AVISDFGTHIQ---ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 A + D + E+ DH + L + ++ FFD V+V DD +R NRL++L Sbjct: 622 ATLDDLLPRLDSLWEAGDHTAALKT---LLEVRPVVDAFFDGVMVMCDDAALRANRLAML 678 Query: 686 QYIKN 690 + Sbjct: 679 NALGT 683 >gi|241767222|ref|ZP_04764968.1| glycyl-tRNA synthetase, beta subunit [Acidovorax delafieldii 2AN] gi|241362135|gb|EER58230.1| glycyl-tRNA synthetase, beta subunit [Acidovorax delafieldii 2AN] Length = 709 Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 212/747 (28%), Positives = 353/747 (47%), Gaps = 89/747 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L LK +G+ + + +P RL ++ ++ Sbjct: 5 NLLVELFVEELPPKALQKLGDAFATVLADQLKAQGLATAASAVTPFASPRRLAAHVTAVA 64 Query: 61 PHSPEKI-EERLGP-RVG--AGKKAIDGFLR---------STGLQTISDCQIKKDPKKGD 107 + +K +++L P VG A A L+ S + ++ + +D K Sbjct: 65 DKAADKAVQQKLMPVTVGLDASGNATPALLKKLQALGADVSNPVAAVAALKRAQDGKAET 124 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMR-----------WSTTHSPISAFSWI 156 ++ + L + L+ + AI K+P PK M W++ H ++ Sbjct: 125 LFYDSVVAGATL-QAGLQKALDEAIAKLPIPKVMSYQLETDCELPGWTSVH-------FV 176 Query: 157 RPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEA 215 RP ++ + ++ + + GN T GHRF A P+ ++ D Y L+ Sbjct: 177 RPAHGLVAL-----HGSTVVPVKALGLTAGNHTQGHRFEAAVSPVVLRDADSYAATLKTD 231 Query: 216 MVLLDPECRRNAILNDAHRLASAV-----GLELVEDKDLLEEIIGLVEWVQVFMGSFDKK 270 ++ R A + A +LA+A G +ED+ LL+E+ LVE V + F+++ Sbjct: 232 GAVVASFAERKAEI--ARQLAAAAAQVGNGARPIEDEALLDEVTALVERPNVLICQFEEQ 289 Query: 271 YLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARL 330 +L +P+E + LT+K NQK F G L N F++VSNI D + + GN RVV RL Sbjct: 290 FLDVPQECLILTMKANQKYFPLLDAAGKLTNKFLVVSNISPEDT-SFVTGGNERVVRPRL 348 Query: 331 EDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERV 390 DA F+ DQ+ L+S E LSK VV+H K+GTQGERV Sbjct: 349 ADAKFFF--DQDRKKTLASRVEG-------LSK-------------VVYHNKLGTQGERV 386 Query: 391 SRIRVLGKKIAQLIDADVALVDRAIVLS--KADLCTEIVREFPELQGKIGKEYAVLQNEN 448 R+R + K IA + + D + K DL T++V EFPELQG +G+ YA+ Sbjct: 387 ERVRAIAKAIAAQLGDAALVADADLAAQLAKTDLVTDMVGEFPELQGTMGRYYALNDGLG 446 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRA 508 + DAIE+H KPR + +P N + V+LADKL+TL+ + I P+G +DP+ALRR Sbjct: 447 ETVADAIEDHYKPRFAGDTLPRNTAGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRH 506 Query: 509 TLGIIRIILENKIDIPLSQF-----------IEDQNLIL--FFHDRLKLYLHDRDIRHDL 555 LG+IR+++E + + LS I D L F +DRL L ++ Sbjct: 507 ALGVIRMLVEKDLPLDLSVLLAGAVPAFGDKITDATPALADFIYDRLAGSLREQGFSAQE 566 Query: 556 IEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 ++A+L L + + + F + + + KR+ IL KK E+ ++ Sbjct: 567 VDAVLALRPQRLALVEKQLAAVRAFAALPESPALAAANKRVSNIL----KKAGEVDPHVN 622 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 P+ L +AE+ LYA + F D Y L + P++ FFD V+VN + Sbjct: 623 PELLQEKAEQDLYAALQRFVPEANAQFDAGDYTASLKTLAVLRAPVDAFFDDVMVNAEQL 682 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKIV 702 ++R NR LL+ + + + V ++ ++ Sbjct: 683 DLRLNRQGLLKSLHDAMNRVADLSRLA 709 >gi|153835124|ref|ZP_01987791.1| glycyl-tRNA synthetase, beta subunit [Vibrio harveyi HY01] gi|148868396|gb|EDL67510.1| glycyl-tRNA synthetase, beta subunit [Vibrio harveyi HY01] Length = 693 Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 204/704 (28%), Positives = 331/704 (47%), Gaps = 67/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAALADS 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 64 QSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F + Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYS 291 Query: 295 REGVLAN-----CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 E N FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 HENGDENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------- 337 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 -------FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEKIGADVE 388 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P Sbjct: 389 KSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELP 448 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +N +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 449 SNGVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLV 507 Query: 530 E---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +Q++I F R + + D D+I+A+L + Sbjct: 508 AKAKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRV 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 568 KAVSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVM 624 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 ++ + Y + L + EP++ FFD V+V VDD ++ Sbjct: 625 TEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMVDDEALK 668 >gi|251796251|ref|YP_003010982.1| glycyl-tRNA synthetase subunit beta [Paenibacillus sp. JDR-2] gi|247543877|gb|ACT00896.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus sp. JDR-2] Length = 693 Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 209/736 (28%), Positives = 339/736 (46%), Gaps = 83/736 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR A L + + + Y ++ + TP RL LY+KG++ Sbjct: 4 DLLLEIGLEEVPARFVRGAMNQLKEKAVKWFDDSRIPYDSVEVFATPRRLALYVKGVAEK 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKK------GDVY 109 + E+ GP G KA GF RS G+ DP++ V Sbjct: 64 QEDVSEQVKGPSRKIALDDQGNWSKAALGFARSQGV----------DPEQFFFQELAGVE 113 Query: 110 LAVLRKPKRLIE--DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 K E VL + I + +PK+MRW + ++RP+K I+ + Sbjct: 114 YVYANKSSVGTETASVLPEGLTNLITSMSFPKNMRWGSYE-----LKFVRPIKWIIALF- 167 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++II +++ + GN++ GHRF + V S Y L + V++D E R Sbjct: 168 ----GQEIIPIEITNVKSGNVSRGHRFLGEETV-VASPADYKERLRQQHVIVDVEEREQL 222 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ LA E+ +DLLEE++ LVE+ V G+FD +L +P+E++ +++ +Q Sbjct: 223 IVAQIQELAKEKNWEIAIKEDLLEEVLFLVEYPNVLYGTFDPAFLNIPQEVLITSMREHQ 282 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F EG L F+ V N + + +GN +V+ ARL DA F++ DQ Sbjct: 283 RYFPVLNAEGQLQPFFVTVRNGDRT-SIENVAKGNEKVLRARLSDAKFFYEEDQK----- 336 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 L N L+K + ++V+H ++GT ++V RIR IA + AD Sbjct: 337 -------LAINDALAK----------LENIVYHEELGTVADKVRRIRATTDLIASRLGAD 379 Query: 408 VALVDRAIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 A + K DL T++V EFPELQG +G++YA E+ + AI EH +PR Sbjct: 380 TDTAAAASRAADICKFDLVTQMVYEFPELQGIMGEDYARKAGESEAVAKAINEHYQPRFA 439 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + P + VSLADK+DT+ ++I P+GS+DPYALRR GI++IIL +D+ Sbjct: 440 GDRAPASLEGAIVSLADKMDTIAGCFSIGIIPTGSQDPYALRRQASGIVQIILAQGLDLK 499 Query: 525 LSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 L+ E ++L FF R+K L ++ R+D+++A++ ++ Sbjct: 500 LTDLFEAALEVHEARGMKRGADEIRKDLNDFFALRVKNVLSEQANRYDVVDAVMATGFND 559 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 L V+ +N+ S ++ +F L+ ++ + K S + AE Sbjct: 560 LRITVERAALINDLSSGSERSEFKLTIDAFNRVCNLASKAE---SRTVDSALFEEAAEGA 616 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY + ++ L S+ + I +FD V+V D VR NRL+ L Sbjct: 617 LYEQWQKAHPAVAAAIAEGDIASALANLSSLKQAINAYFDSVMVMAKDDAVRSNRLATLS 676 Query: 687 YIKNIILIVINVQKIV 702 I + I + + K+V Sbjct: 677 LIADDITAIADFSKLV 692 >gi|88657718|ref|YP_506857.1| glycyl-tRNA synthetase, beta subunit [Ehrlichia chaffeensis str. Arkansas] gi|88599175|gb|ABD44644.1| glycyl-tRNA synthetase, beta subunit [Ehrlichia chaffeensis str. Arkansas] Length = 703 Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 207/742 (27%), Positives = 357/742 (48%), Gaps = 85/742 (11%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 MP + L E SEE P MQ A + + L + +++++ + T +RL LY+K + Sbjct: 1 MPLELLFECLSEETPPEMQSSAYAYMDSYIRKELSRCNISFESVKVFVTSNRLTLYVKNI 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISD---CQIKKDPKKGDVYLAVLRKP 116 + + GP+V A K AI+GFL+ + SD C+I D D Y A L Sbjct: 61 INNLSNNTLKIKGPKVSADKIAIEGFLKKVN-KNFSDLITCKIGND----DFYYAELNHN 115 Query: 117 KRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E ++ +I+ + PW K MRW + W+RP+ +I+CIL K+ Sbjct: 116 EETNTEHIILSIIENMLNNFPWDKKMRWGGGKT-----YWVRPILNIMCILDG-----KV 165 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + +I N + G+RF +V + Y L++ V+L + R N IL+ + Sbjct: 166 LPIKFADIEANNKSCGNRFTNKEFFEVADFNSYNSKLKKNNVILCQKERLNFILHQIKSI 225 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 L +++ L+ ++ G +E+ V MGS D+K+ LP+ELI L++ N + ++ + Sbjct: 226 TEESNLICEDNQKLINKLNGTLEYPIVIMGSVDEKFSELPKELI-LSVMHNHQKYLAVFK 284 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E + N FI +S I + I++G++ ++ ARL DA K+D+ Sbjct: 285 EDKITN-FITISTISNDN----IIKGHNNILNARLLDASFLVKKDK-------------- 325 Query: 356 KFNLDLS-KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDR 413 ++N+D + L Q +VFHAK+G+ E+V+RI L K I+ I + + V+R Sbjct: 326 EYNIDYYIEKLKQ---------IVFHAKLGSVFEKVNRIIALSKYISIWIPHSSLIKVER 376 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A LSK DL T ++EFPELQG +G YA NE++ ++I H +P P + P++ I Sbjct: 377 AAKLSKFDLSTLAIKEFPELQGIMGGYYASYFNESLEISESIVNHYEPTNPQKECPSSPI 436 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRAT------------LGIIRIILENKI 521 SI VS++DK+D L+ E+ + S+DP+++RR IR+++E + Sbjct: 437 SIAVSISDKIDNLVGMIVAGEQVTSSRDPFSMRRMAISIIRIIIENNLNIPIRLLIEKSV 496 Query: 522 DI------------PLSQFIEDQN--------LILFFHDRLKLYLHDRDIRHDLIEAILR 561 + L I N +I FF +R K+ L + I+ D+I A+ Sbjct: 497 SLYSFAITERTTINKLKNVISRTNRKKEIISSVIEFFSNRFKIILKEDGIKEDIINAVFE 556 Query: 562 PEN-DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 NLL I K LN + + G + + + KR+ I+ E N + + + Sbjct: 557 SRKFSNLLLIKTEAKFLNNYIFTKNGVEIIKAYKRLSNIITKGENVNNTAKYKCNKKLFT 616 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVN-VDDREVRD 679 ++ E LY I+ +I+ + ++ + + L+ + + F D V VN ++E+ Sbjct: 617 IKEETDLYKEITYQKNNIKRLIKDNKFEESLNNLYKLSCCVNSFMDNVKVNDQTNKELHK 676 Query: 680 NRLSLLQYIKNIILIVINVQKI 701 NRLS+++ I +V + KI Sbjct: 677 NRLSIVKNAFYIFDLVTDFSKI 698 >gi|289434740|ref|YP_003464612.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170984|emb|CBH27526.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 688 Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 213/723 (29%), Positives = 352/723 (48%), Gaps = 83/723 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + E L + L+E + + ++ + +P RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAQYVTSSVEQLKKRMRDWLEENQIAFAEIKTFSSPRRLTVLVEDMAEE 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q I + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDEEGNWSKAALGFAKS---QKIEPADLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPVAIQKV----PWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 K +I + ++P A+QKV +P SM W +IRP+K ++ + E Sbjct: 118 KKEVIGEKTTALLP-ALQKVVTSMTFPVSMHWGNND-----LRYIRPIKWLIAMFGQE-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 II ++ + N + GHRF Q D Y L E V++D R+ AI Sbjct: 170 ---IIPFEITGVTTSNTSRGHRFLGKTTTIKQPSD-YQNALLEQFVVVDATERKEAISGQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS ++ ED DLLEE+ LVE+ V G+F+++YL LPEE++ T+K +Q+ F Sbjct: 226 LKELASLENWQIKEDADLLEEVTNLVEYPTVLAGNFEEEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +++G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQDGKLLPHFVTVRN-GNHENIETVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L + + +A+L ++VFH K+GT E++ R++ + IA +D AD Sbjct: 334 ---------LKMTIAEAVAKLP--NIVFHEKLGTLTEKMKRVQKVALMIADYLDWKEADK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T +V EFPELQG +G++YA+LQ E + AI EH P+ + Sbjct: 383 EDIIRLTDIYKFDLVTNVVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPKSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP---- 524 P + +++ADKL+T + F+ +N P+GS DP+ LRR+ G +RII N DIP Sbjct: 443 PQTDLGSLIAIADKLETFVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLEL 502 Query: 525 LSQFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 LS+ ++ + + F +RL++ L + IRHD+I+A++ + + + Sbjct: 503 LSRIVDMERAEGAVELPSDDVKREVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +VD + LN+ S E F + + + ++L I +K E +E+ P E E L+ Sbjct: 563 LVDRAQILNKHVES---EWFRPTVEALTRVLNISKK--YEEGVEVDPALFENEYEHALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R L +I + +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKYDYASLTILERLKAFAGLRTTIDD----YFDNTLVMSDNLELKNNRLALLFELA 673 Query: 690 NII 692 + I Sbjct: 674 SFI 676 >gi|27364425|ref|NP_759953.1| glycyl-tRNA synthetase subunit beta [Vibrio vulnificus CMCP6] gi|32130159|sp|Q8DDJ7|SYGB_VIBVU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|27360544|gb|AAO09480.1| Glycyl-tRNA synthetase beta chain [Vibrio vulnificus CMCP6] Length = 693 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 207/705 (29%), Positives = 334/705 (47%), Gaps = 69/705 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L+ H Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTALAEH 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 QADKIVEKRGPAVSAAFDADGNATKAAQGWARGCGITVDQAERMITD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + D++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTADIVVELAAKALAGLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ + + GHRF ++S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IQGEILGVASDRVIRGHRFMGEREFTIESAEQYPSILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G + DL+EE+ LVEW V F++++L +P E + T+K +QK F T Sbjct: 232 AAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFPVYT 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 292 EDKQLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFFFNTDRK------------ 338 Query: 355 LKFNLDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 SK +D RL ML+ +F ++GT ++ RI L IA+ I ADV R Sbjct: 339 -------SKLID----RLPMLENAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKSKR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR +++P+N + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDDLPSNGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 448 SSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAK 506 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +Q +I F R + + D D+I+A+L Sbjct: 507 SLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 567 VKAVSHFRELEAAEALAAANKRVGNILA---KFDGELAADIDLALLREDAEKVLAENVEV 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 624 MTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 668 >gi|73540213|ref|YP_294733.1| glycyl-tRNA synthetase subunit beta [Ralstonia eutropha JMP134] gi|72117626|gb|AAZ59889.1| Glycyl-tRNA synthetase, beta subunit [Ralstonia eutropha JMP134] Length = 710 Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 206/718 (28%), Positives = 343/718 (47%), Gaps = 78/718 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + + + + L L+E ++ + + + +P RL + G+ Sbjct: 9 LLIELFTEELPPKALARLGDAFAQGLFAGLRERDLLEADAAVTPFASPRRLAALVSGVRR 68 Query: 62 HSPEKIEER-----LGPRVGAGKKAI-------DGFLRSTGLQTISDCQIKKDPKKGDVY 109 +P++ E+R L +GA + +S G+ I D Q + G Sbjct: 69 SAPDR-EQREKVLPLTVALGANGEPTAPLAKKLAALAKSVGVAEI-DWQTLERASDGKAE 126 Query: 110 LAVLRKPKRLIE--DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 R + E L+ + I K+P PK M + F +RP ++ + Sbjct: 127 AFFYRYTAKGAELAAGLQAALDDTIGKLPIPKVMSYQRPGGETVHF--VRPAHRLIALFG 184 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRN 226 +E I+ + L +P N+T GHRF + I++ Y L E+ V+ + RR Sbjct: 185 SE-----IVPVTLLGLPASNLTQGHRFLSHGTIEIAHATQYADTLLEQGKVIANYAQRRE 239 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 +I L +A ++V + LL+E+ LVEW V+ F++ +L +P+E + LT++TN Sbjct: 240 SIRE--QLLKAAGADQVVMPEALLDEVNSLVEWPVVYACHFEEAFLAVPQECLILTMQTN 297 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F EG L N F++VSN+ A++ +I+ GN RVV RL DA F Sbjct: 298 QKYFALTDAEGHLRNRFLIVSNL-ATETPQSIITGNERVVRPRLADAKFF---------- 346 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 F+ D K L R+ +L VV+H KIGTQ +RV R++ + IA ++A Sbjct: 347 ----------FDQDRKKTLASRVPQL--ASVVYHNKIGTQLDRVQRLQQIAGHIADAMNA 394 Query: 407 DVALVDRAIV-----LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 VD+A L+KADL T++V EFPELQG +G YA +E+ A EH +P Sbjct: 395 SGFAVDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDESEDVALACSEHYRP 454 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P +S V+LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E + Sbjct: 455 RFAGDVLPEGAVSTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEKPL 514 Query: 522 DIPLSQFI---------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 + + + + F +DR++ YL D+ + +EA++ Sbjct: 515 ALSVDTLLALTQQAFAGVPAVKPAPDAIADFLYDRVRGYLKDKGYTTNEVEAVVSLRPQQ 574 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS---PQYLLLEA 623 L I+ ++ + F + + E + KRI IL KKN E + +I+ P +A Sbjct: 575 LHDILGRLEAVRTFAALPEAEALAAANKRITNIL----KKNAEAAQDIAAVNPALFQEDA 630 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 E+ L+ I + + + L + E ++ FFD V+V +D ++R NR Sbjct: 631 ERALHGAIERVRPDAEAAFARGDFTSALRDLAQLREAVDGFFDNVMVMAEDAQLRANR 688 >gi|221200098|ref|ZP_03573141.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2M] gi|221206749|ref|ZP_03579761.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2] gi|221211279|ref|ZP_03584258.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD1] gi|221168640|gb|EEE01108.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD1] gi|221173404|gb|EEE05839.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2] gi|221180337|gb|EEE12741.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2M] Length = 699 Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 207/713 (29%), Positives = 343/713 (48%), Gaps = 63/713 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +P++ + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPDRQVREKVLP 81 Query: 74 ------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 G + L + G TI++ + +D K + + + D L+ Sbjct: 82 VSVALDAQGNPTAPLAKKLAALGHPNLTIAELERAQD-GKAEAFFINYSAAGATLADGLQ 140 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 141 AALDETLAKLPIPKVMTYQRPDG--SDVQFVRPVHRLTVL-----HDDRVVPVTAFGIDA 193 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 G+ T GHRF + + ++ Y L ++ V+ R+ I + A+ G +V Sbjct: 194 GDTTLGHRFLSDGLVAIRHASAYAETLRDKGRVIAHFGDRKETIRTQLNEHAN--GDTVV 251 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F+ Sbjct: 252 MPDALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIGGKLRSRFL 311 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 +VSNI+ G IV+GN RVV RL DA F+++D+ KP Sbjct: 312 IVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK--------------------KP 350 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL T Sbjct: 351 LAARVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADLLT 408 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E A EH +PR + +PT +S V+LADKL+ Sbjct: 409 DMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDTLPTTPVSTAVALADKLE 468 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------------- 529 T++ W I P+G KDP+ALRR LG++R+++E ++ + L + Sbjct: 469 TIVGIWGIGLAPTGEKDPFALRRHALGVLRLLIEKQLPLDLVSLLRTAYARFEGVPGVAE 528 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ FF DRL+ L +R ++A+L L +V + + EF A+ E Sbjct: 529 STDAIVAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRLDDLVARLDAVREFTRLAEAEAL 588 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 589 AAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAYTG 645 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 646 ALSALAALRAPVDTFFNDVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|229815346|ref|ZP_04445681.1| hypothetical protein COLINT_02392 [Collinsella intestinalis DSM 13280] gi|229809126|gb|EEP44893.1| hypothetical protein COLINT_02392 [Collinsella intestinalis DSM 13280] Length = 696 Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 200/734 (27%), Positives = 337/734 (45%), Gaps = 79/734 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ EE+P+ + A + L ++ L E G+ + +R +P RL + + ++ Sbjct: 6 DFLFELGVEEMPSAPLNNAVKQLESLMGKGLDEAGLAHGAIRVISSPRRLAVLVSDVAEA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G KA +GF R GL T + ++D + A Sbjct: 66 TEEIHSVLRGPSAKIAFDAEGNPTKAAEGFARKNGL-TARELVRREDADGTEYVFAEQNT 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P +L + I + WP +S RW + H+ +++RP++ I C+ E Sbjct: 125 PSEPALPILTRVCEGLIPSIQWPNYRSQRWGSEHA-----TFVRPVRWICCLF-----GE 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ + ++ GN T GHR +P V S D Y LE A VL E R I Sbjct: 175 EVVPVSFADVVSGNTTRGHRVLSPGEHLVASTDAYEDVLESAHVL-SAERREQVIREGIA 233 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++ S +G+ + + +E++ L EW V +G FD+++L +P E+I ++ +NQ+ F T Sbjct: 234 KVESELGVRVDTPAKVFDEVVNLCEWPTVLVGHFDEEFLNVPSEIICESMLSNQRYFPTY 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L F++VSN A ++ GN RVV ARL DA F+ D Sbjct: 294 DAEGNLTRAFVVVSNGDPK-ANATVIDGNERVVRARLYDAKFFYDED------------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 LK +L++ + +R+A V F K+GT ++ R+ L IA+ L + Sbjct: 340 -LKVDLEVFR---ERLA-----SVGFQQKLGTVLQKSDRMEDLALAIAREAHLGAHAASS 390 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL + V EF QG +G YA E AI +H +PR +++P Sbjct: 391 AQRAAHLAKADLVSSAVVEFTSQQGVMGGYYATAAGEEPEVAAAIRDHYRPRFAGDDLPE 450 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------LENKIDI 523 V++ADKLDT+ +AI+E P+GSKDP+ALRR+ +G++ I+ E +D Sbjct: 451 GIAGCIVAVADKLDTIAGMFAIDEPPTGSKDPFALRRSAIGVLNILRTRLKCGYEAIVDA 510 Query: 524 PLSQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L ++E ++ F R+ D + D + A+ +D +T+ Sbjct: 511 ALEGYLEQGLEFDKAAVAASVCAFIKGRMAQMARDEKVSADTVAAV----SDGDVTVPVH 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-----NREISLEISPQYLLLEAEKRLY 628 L A+ + F LA + + E+ +E + + L+ +AE L Sbjct: 567 FFELAHALEEARAND-----REAFTNLATAYARAAHLADAELGIE-ADRNLMGDAELALL 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++D + + + L ++ PI+ FFD V+V +D VR+NRL LL Sbjct: 621 YATDAARDEVASALDARDFKAVIAALAALRGPIDAFFDDVMVMDEDMAVRENRLRLLNRF 680 Query: 689 KNIILIVINVQKIV 702 +++ + N+ ++ Sbjct: 681 EDVFAGIANIGEMA 694 >gi|330718878|ref|ZP_08313478.1| glycyl-tRNA synthetase subunit beta [Leuconostoc fallax KCTC 3537] Length = 683 Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 206/727 (28%), Positives = 353/727 (48%), Gaps = 78/727 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EE+PA + AAE L L++ + ++ Y TP RL + L ++ +S Sbjct: 5 FLLEIGLEEVPAHLVTGAAEQLVKRTQAFLEQHRLDVAEIKSYSTPRRLAVQLIDVAENS 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 EE GP + G KA GF R G D ++KD G V+++ Sbjct: 65 ASIDEEYRGPSLKIAKDDTGNWSKAAQGFARGKG--ATPDDFVEKD---GYVFVSKHISG 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 I D+L I ++++ + M+W+ F ++RP++ ++ + ++ I+ Sbjct: 120 VPAI-DILANIGSEVVEQMKFSTYMKWANFD-----FLYVRPIRWLVALFDSD-----IV 168 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D + ++ G T GHRF + I + + Y L A V+ D R+ I +A Sbjct: 169 DFSVLDVRSGRTTRGHRFLSSDNIDILNAQSYEETLALAHVVADAHQRKQKIRQQLDDIA 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + L D+DLLEE+ +VEW F GSFD+KYL +P+E++ +++ +Q+ F ++ Sbjct: 229 AQHQWVLHVDEDLLEEVNNIVEWPTTFSGSFDEKYLAVPDEVLITSMREHQRFFFVTDQD 288 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L F+ V N A+ ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 289 QHLLPYFVSVRNGDANHL-QNVIAGNEKVLIARLEDAVFFYQEDQQ-------------- 333 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---R 413 K + M ++ L VFH KIG+ E + R++ L ++A+ D R Sbjct: 334 ------KTIADYMEKVKKL--VFHEKIGSVYEHMQRVKQLAAQLAESFDFTTQQQQDLLR 385 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 + + K DL T +V EF ELQG +G+ YA E+ + AI+EH P ++P + + Sbjct: 386 SADIYKFDLMTGMVGEFDELQGIMGEHYAKRFGESDAVAAAIKEHYLPVSADGDLPVSDV 445 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 ++LADKLD +I+F+A PSGS DPY LRRA GI+RI+ + K I L+ + Sbjct: 446 GAVLALADKLDGIISFFAAGLIPSGSNDPYGLRRAATGIVRILKDKKWHIALADVLATFI 505 Query: 532 -----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD-----LIK 575 Q ++ F DR++ D+ IR D+I A + ++ + + +D L + Sbjct: 506 PKNSATEGADLQTILNFILDRVRKIESDKGIRSDIIAAGTQMKSISDIVYIDERVHVLAQ 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 H + A + + + R+ Q LA E+ +E+ L +AE+ LY + + Sbjct: 566 HAQD---DANFREVMETLTRV-QKLAHGYVAQGEVQVEL----LENDAEQALYRLTHELN 617 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + ++ + L ++ + I+ +FD +V VDD +++NRL+ L I +I+ + Sbjct: 618 LDV---LVNEGAEVVYTTLANLTQAIQDYFDNTMVMVDDERIKNNRLTQLSQINRLIMQL 674 Query: 696 INVQKIV 702 ++ +IV Sbjct: 675 GDLNQIV 681 >gi|313891695|ref|ZP_07825302.1| glycine--tRNA ligase, beta subunit [Dialister microaerophilus UPII 345-E] gi|313119973|gb|EFR43158.1| glycine--tRNA ligase, beta subunit [Dialister microaerophilus UPII 345-E] Length = 682 Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 205/733 (27%), Positives = 364/733 (49%), Gaps = 87/733 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP- 61 + LLEI +EE+PA++ E L+ + +K + + +++ Y TP RL + ++ S Sbjct: 4 NLLLEIGTEEMPAKIMPGLVEQLNQLANIEMKNARLSFDDVKVYATPRRLAVIIEKSSEI 63 Query: 62 HSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 S E + +R GP + A +A+ GF +S I+K K+G+ A + Sbjct: 64 QSDENLRKR-GPSIKAAFDKEGNPTRALQGFAKS------QKVDIEKIEKEGEYTWANIT 116 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + I++VL I I + + +SM W T +IRP++ ++ + E+ Sbjct: 117 NKGKKIQEVLPVIFKNLISNLNFSRSMNWGTEKE-----RFIRPIRWLVAM-----CDEE 166 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II ++ + GNI+ GHRF A +++++ + Y ++++ V++D + RR I+ + Sbjct: 167 IIPVEFAHVKSGNISRGHRFLASDHVEIKNAESYKETMKKSFVIVDQDERRQMIIEGLKK 226 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ++ + L E+K LLEEI LVE+ G D+K+L LP + ++ +Q+ + R Sbjct: 227 VSEKLNGILWENKGLLEEINYLVEYPTALYGKIDEKFLQLPVPAVVTPMRDHQRYYPLRN 286 Query: 295 REGVLANCFILVSNIQASDGGAAIVQ----GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L F+ V N GG ++ GN RV+ ARLEDA F+ D++ +L + Sbjct: 287 KNGKLMPYFLTVRN-----GGTQSLENVKVGNERVLRARLEDAQFFF--DEDRKKSLENF 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDAD 407 +E+ + N + +GT ++ +R+ L + A+ L D + Sbjct: 340 RENLKRIN--------------------YQEGMGTMLDKANRLSALTELFAKEWKLSDEE 379 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + RA LSK+DL T +V EF ELQG++GKEYA+L NE + +AI E PR + Sbjct: 380 AKDLKRASYLSKSDLATHMVTEFTELQGEMGKEYALLDNEKETVANAIFEQYLPRFSGDV 439 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + I +SLADKLD L + P+GS+DP+ALRR T+GI+ I+ + KI ++ Sbjct: 440 LPKSNIGRALSLADKLDNLTATFLRGLIPTGSQDPFALRRQTIGIVNILNDGKIHWDITS 499 Query: 528 FI-----------EDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I + +N +L F R+K+ + D I +D+++A+ +D++ I Sbjct: 500 GIKKALDLLSDDEKQKNKVLLQILEFIRQRVKVIMSDLKIDYDIVDAV----SDDMTDIY 555 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA--EKRLYA 629 + + N E+ L +++ L+ K + +E S L EA EK LY Sbjct: 556 AVFRKANAVIEMNVKEEIEL--RQVVTRLSHITKDKNPVKIEES----LFEANEEKELYK 609 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + ++ + Y ++ + L ++ + I F D V+V V++ V++NR+SLL + Sbjct: 610 AYIEIADKLKAECEAHEYIKMFEPLKNLVKYINAFLDSVMVMVENENVKNNRISLLIEVL 669 Query: 690 NIILIVINVQKIV 702 N+ + + K+V Sbjct: 670 NLYKMWGDFSKLV 682 >gi|332703856|ref|ZP_08423944.1| Glycyl-tRNA synthetase beta subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554005|gb|EGJ51049.1| Glycyl-tRNA synthetase beta subunit [Desulfovibrio africanus str. Walvis Bay] Length = 696 Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 206/709 (29%), Positives = 326/709 (45%), Gaps = 77/709 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP F+ EI +EE+PAR + +L+ L L E V + Y TP RL + ++ Sbjct: 1 MPQFVFEIGTEEMPARFVPALSSELAASLFSRLAEAKVDCGEIHTYGTPRRLVAMVADMA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++EE GP G KA GF S G+ S ++ PK YLA Sbjct: 61 ESQRSEVEEVTGPPARIAFDAEGKLTKAGLGFAGSQGVPPESLYTVET-PK--GAYLATK 117 Query: 114 RKP--KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R I D+L + A+ + +PK M W + F++ RP++ I+ +L +E Sbjct: 118 KATGGARSI-DILPALCQAAVSALNFPKKMHWGSGD-----FTFGRPIRWIVAMLGSE-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY---IRDLEEAMVLLDPECRRNAI 228 II L + N+T+GHR P + + Y IR E+ V+LDP R + I Sbjct: 170 ---IIRFSLAGVESSNLTWGHRVMGAGPFAIARAEDYQLVIR--EQGKVVLDPTRRLDII 224 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + A A G +V + LLEE++ LVE + SFDK YL LP E++ +++++QK Sbjct: 225 RKLGNASAEAEGGSVVWKQSLLEEVVNLVEHPIPVLASFDKAYLELPREVLLTSMESHQK 284 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + ++G L F+ V N++ D + +G RV+ ARLEDA FWK D Sbjct: 285 SFGVQGKDGKLLPFFLTVINLEPKDEDL-VRKGWERVLKARLEDARFFWKGD-------- 335 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 LS+ D +LD V F +G+ G++ R+ L +AQ I ++ Sbjct: 336 ------------LSRDFDYWCRKLD--SVTFLGPLGSMGDKSRRLERLCGYLAQQISPEL 381 Query: 409 AL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 L + A +L+K DL T++V EF LQG +G YA + + + AI E P GP Sbjct: 382 LLDLSAAGLLAKCDLVTDMVGEFDTLQGIMGGIYARKKGKGETVAQAIAEQYLPTGPDSP 441 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P + +++ADK DTL + ++ P+G+ DPYALRR LGI RI++++ + + L+ Sbjct: 442 TPQSLAGALLAMADKADTLAGTFGLDMVPTGAADPYALRRQALGICRIVIDHGLRLSLTD 501 Query: 528 FIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + L+ FF R+K Y + ++EA L D++ Sbjct: 502 LLRTAHGVYGDVQWKLAPDESLRKLLDFFGQRIKAYFTAKGHETLVVEACLGAGIDDIWA 561 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY----LLLEAEK 625 ++ L+EF E+ +L+ KR I+ K+ E + + Y L E E+ Sbjct: 562 FSRRLEALSEFSRGEGFEQAVLTFKRAANII---RKQGSEAGVALDGAYEKRLLESEHER 618 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 L I Y + LL + ++ FFD V+V +D Sbjct: 619 ELAQAIEAVSPRFDALWAQDDYASLMSLLAELRPYVDRFFDNVMVMAED 667 >gi|254991890|ref|ZP_05274080.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J2-064] Length = 575 Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 179/609 (29%), Positives = 302/609 (49%), Gaps = 72/609 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ ++ Sbjct: 4 DFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEMAEE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++EE GP G KA GF +S Q ++ + KG Y+ + Sbjct: 64 QANRVEEAKGPAKKIALDDEGNWSKAALGFAKS---QKVAPEDLTFREIKGVEYIYI--- 117 Query: 116 PKRLIEDVLKTIVPV---AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K +I + ++P + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF Q D Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLGKTATINQPSD-YPNALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRN-GNHENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVV 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQL 563 Query: 571 VDLIKHLNE 579 +D + LN+ Sbjct: 564 IDRAQILNK 572 >gi|154173823|ref|YP_001408091.1| glycyl-tRNA synthetase subunit beta [Campylobacter curvus 525.92] gi|112803116|gb|EAU00460.1| glycyl-tRNA synthetase, beta subunit [Campylobacter curvus 525.92] Length = 673 Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 203/730 (27%), Positives = 363/730 (49%), Gaps = 93/730 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI EE+PA + ++ +L E + + Y+TP RL + + + + Sbjct: 4 DILIEIGVEELPAIPFLRELPNIEAKWRAVLAEYK-LESEFKFYYTPRRLVFFHENFALN 62 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ + E +G + GA +A F + G I + ++K G L R+ Sbjct: 63 QPDSVAEFIGAPKQVAIKDGAFTQAALSFAKKCG---IDESELKFKEIGGKEVLYYERQL 119 Query: 117 K-----RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 K +L D+++ + + + KSMRW + F +IRP++S LC+ E Sbjct: 120 KGEASVKLFGDMIEKF----LLSLNFGKSMRWGSGE-----FEFIRPIRSFLCLFGGE-- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ + + GN TY HR + V S D Y + ++LD RR+ IL Sbjct: 169 ---VVKFNKFGVESGNGTYPHRSISYDKSLVNSADEYFSGMRARGIVLDASERRSIILAQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L G+++ D+DLL+E++ + E+ +G F+ ++L +P E+I ++K NQ+ F Sbjct: 226 FKELEKG-GIDIQIDEDLLDEVVAITEYPTALLGEFEAEFLEVPSEVIITSMKENQRYFP 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD------QNNLP 345 + G L+N F++VSN A DG A IV+GN +V+ ARL DA+ FW+ D + L Sbjct: 285 V-FKNGKLSNHFVVVSNALAKDG-ALIVKGNEKVLRARLSDAMFFWRSDLKAEFSPDKLK 342 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARL-DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 N++ LKE ++ +L R A++ D L ++ ++ + E + R Sbjct: 343 NITYLKELGSLYDKEL------REAKIADELANLYENEL--KDEVGAGFR---------- 384 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 A ++RA++L+KADL T++V EF ELQG +G YA + E AI E P Sbjct: 385 ----AKLNRAVMLAKADLTTQMVYEFTELQGVMGAYYARAKGEEDVIVTAIREQYLPDSE 440 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 P++ S V+LA+KLDTLI +++ + PSG+KDP+ALRRA G+I+I+L + + Sbjct: 441 DAPCPSSVFSSVVALANKLDTLIGLFSVGKIPSGTKDPFALRRAANGVIKIVLAHGLKFD 500 Query: 525 LSQFIED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +S ++ +N IL DRL + D +++A + + ++L + Sbjct: 501 ISSVLKSLSAQYKSFDLGLLENFIL---DRLYTFF---DTNPSIVKACINSDKRDILQLT 554 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ ++E S ++ + KR+ I+ +++ + + LL +E+R + Sbjct: 555 KAVEAMSEISSKPNFKELFSTFKRLANII-------KDVDVGTVDENLLQTSEER---AL 604 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ +++S DHK + L + I+ FFD+V++NVDD +R NR++++ I Sbjct: 605 NEGFKALKDSPDHK---ACLNELFGLKGEIDAFFDKVMINVDDENIRKNRIAVIGQIYKS 661 Query: 692 ILIVINVQKI 701 L + ++++I Sbjct: 662 FLEIADIKEI 671 >gi|269958340|ref|YP_003328127.1| glycyl-tRNA synthetase beta subunit [Anaplasma centrale str. Israel] gi|269848169|gb|ACZ48813.1| glycyl-tRNA synthetase beta subunit [Anaplasma centrale str. Israel] Length = 694 Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 200/733 (27%), Positives = 351/733 (47%), Gaps = 78/733 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D +LE+ E++P + A E + + +G+ Y + + TP+R+ + Sbjct: 4 DLVLEVLCEQLPIKTMKVACEYIQPKIDREFINKGISYSTSKTFTTPNRIIFTAYNIDQS 63 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 +E GPRV + +K I GFL+ G ++I + +I++ + Y + + K L + Sbjct: 64 KGSGKKEVKGPRVSSDEKVISGFLKKVGKESIEELEIREFSGEKFYYSSKVLSSKDLTSE 123 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 V + ++ I P K MRW + W RP+ ++LC++ ++ + + Sbjct: 124 VAE-VIQCMIDDFPLHKRMRWG-----VGTGHWTRPVINVLCVMDGN-----VLPVSVAG 172 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + NITYG+ A V ++ Y++ L E+MV++D E RR IL + S L Sbjct: 173 VVANNITYGNLRFANRQHTVTNVVGYLKFLSESMVIVDTEERRKCILEQLNEKISDAKLT 232 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + +LE++ +E+ ++ +GS D+ + +P E++ + +QK + +EG + Sbjct: 233 YDHNAQMLEDMSSSLEYPKILVGSVDESFSEIPTEVVSCVMVHHQKYVALKNQEGKIVK- 291 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F V AS +++ + V+ ARL DAL K+D KE+ + ++L Sbjct: 292 FASV----ASVVNDKVIKNHEMVLRARLSDALFLIKKD----------KENEMNHYVNL- 336 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRAIVLSKAD 421 + +VF + +GT ++V R+ L K + I L +RA ++SKAD Sbjct: 337 -----------LSTIVFRSGLGTLLDKVERMSALAKYCSVWIPHSSMLNAERAAMVSKAD 385 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +VREFPELQGK+G+ YA E C AIEEH P G + P + I I VS+AD Sbjct: 386 LATLVVREFPELQGKMGRYYAKHSGEVDDVCLAIEEHYLPTGQNDPCPKSPIGIAVSIAD 445 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----------- 530 K+D+L+ A EK S S+DP+ALRR ++ ++R+I+EN I IPL + Sbjct: 446 KVDSLVGLMA-TEKISSSRDPFALRRTSISLLRVIIENNISIPLDLIVAKAVSMYTRKAW 504 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 N++ F ++RLK+ L + D+ ++I+AI+ +D + T+ + Sbjct: 505 LSKNKNHLLSVDRDALTSNVLSFCYERLKVILKESDLDKEVIDAIVGRFHD-IPTVKKKV 563 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA--EKRLYAVIS 632 + + E+ + +G + + KR + I+ K++ E ++ P L + E +LY I+ Sbjct: 564 EVICEYLKTKEGSTVITAYKRAYNIIT---KESVEWKSDVRPNKRLCKECYEVQLYDQIN 620 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR---EVRDNRLSLLQYIK 689 I M ++ + + L + F D V V DR E+ NR+ LL Sbjct: 621 HHKKLISILMKGSKFSEAMNSLFEFSSFVNAFMDG--VRVCDRVNTELYRNRVDLLVSSV 678 Query: 690 NIILIVINVQKIV 702 N+ V++ KI+ Sbjct: 679 NVYNKVLDFSKIL 691 >gi|295675499|ref|YP_003604023.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1002] gi|295435342|gb|ADG14512.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1002] Length = 699 Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 206/685 (30%), Positives = 333/685 (48%), Gaps = 59/685 (8%) Query: 42 NMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ-- 92 + ++ TP RL + + + +PEK + E++ P + G + L + G Sbjct: 49 SFERFATPRRLAVTIHNVRAVAPEKHVREKVLPVSVALDKDGQPTAPLAKKLAALGFPDF 108 Query: 93 TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 T++D + +D K + + P + D L+ + + K+P PK M + S+ Sbjct: 109 TVNDLERAQD-GKAEAFFLRYAAPGATLADGLQAALDETLGKLPIPKVMTYQRPDG--SS 165 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 ++RP+ + + E+I+ + I + T GHRF + +++Q Y L Sbjct: 166 VQFVRPVHRLTAL-----HGEEIVPVSALGIDADDTTLGHRFLSEGFVQIQHAQSYAETL 220 Query: 213 EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYL 272 E ++ RR + + LA A ++V + LL+E+ LVEW V+ F+ ++L Sbjct: 221 EHRGRVIASFARRKEAIR-SQLLAHAAEDKVVMPEALLDEVTSLVEWPVVYECRFEDEFL 279 Query: 273 CLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLED 332 +P+E + LT++TNQK F G L + F++VSNI+ + IV+GN RVV RL D Sbjct: 280 QVPQECLILTMQTNQKYFALTDANGKLRSRFLIVSNIETATP-VEIVEGNERVVRPRLAD 338 Query: 333 ALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSR 392 A F+ +D+ KPL R+ L +VV+H K+G+ +RV R Sbjct: 339 AKFFFTQDKK--------------------KPLADRVPLL--ANVVYHNKLGSALQRVER 376 Query: 393 IRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCC 452 + L IA + ADVA RA L+KADL T++V EFPELQG +G YA E Sbjct: 377 LEGLAGAIAAMTGADVARATRAARLAKADLITDMVGEFPELQGTMGTYYARHDGEQEEVA 436 Query: 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 A EH +PR + +PT + V+LADKL+TL+ W I +P+G KDP+ALRR LG+ Sbjct: 437 LACSEHYQPRFSGDALPTTETGTVVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGV 496 Query: 513 IRIILENKID--------IPLSQFIEDQN-------LILFFHDRLKLYLHDRDIRHDLIE 557 +RI++E +++ I +QF N + F DRL+ L +R I+ Sbjct: 497 LRILIEKQLNVDFVDLLRIAYAQFAGMPNVADATDAIYEFSMDRLRGLLRERGYAAGEID 556 Query: 558 AILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ 617 A+L L IV + + EF S A+ + KRI IL +K + + P Sbjct: 557 AVLALNPTRLDDIVARLDAVREFASLAEAASLAAANKRISNIL---KKSEGVTNGGVQPG 613 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 L AEK L A + +Q + + Y L ++ EP++ FF+ V+VN +D + Sbjct: 614 LLTEAAEKALNAQLEQVTPRVQSQLAVRDYTGALTALAALREPVDTFFNDVMVNSEDPAL 673 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R NRL+LL + + V ++ ++ Sbjct: 674 RANRLALLGALHQQMNCVADISRLA 698 >gi|257791137|ref|YP_003181743.1| glycyl-tRNA synthetase, beta subunit [Eggerthella lenta DSM 2243] gi|317488133|ref|ZP_07946708.1| glycyl-tRNA synthetase beta subunit [Eggerthella sp. 1_3_56FAA] gi|325832897|ref|ZP_08165570.1| glycine--tRNA ligase, beta subunit [Eggerthella sp. HGA1] gi|257475034|gb|ACV55354.1| glycyl-tRNA synthetase, beta subunit [Eggerthella lenta DSM 2243] gi|316912761|gb|EFV34295.1| glycyl-tRNA synthetase beta subunit [Eggerthella sp. 1_3_56FAA] gi|325485762|gb|EGC88226.1| glycine--tRNA ligase, beta subunit [Eggerthella sp. HGA1] Length = 696 Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 214/730 (29%), Positives = 337/730 (46%), Gaps = 79/730 (10%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 EI +EEIPA H+A L ++ L + + ++ Y TP RL + ++ + E Sbjct: 9 FEIGTEEIPAFDLHRATLQLEKLVPEALDAVRIPHGDVAVYTTPRRLIAIVADVADET-E 67 Query: 66 KIEERL-GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 +EE GP V G KA GF R G+ D +++ + A Sbjct: 68 ALEEVFRGPSVKIAFDADGNPTKAATGFARGKGVGV--DALERREENGVEYVFATKSIAA 125 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R + ++L ++ I WPKS RW TT S RP++ ++ +L E++I Sbjct: 126 RDVAELLPGVLEGVITGTSWPKSCRWGTTSEYFS-----RPVRWLVALL-----DERVIP 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + GN+T GHRF AP P +V + + +E A V+ + R I + Sbjct: 176 VRFAGLTAGNLTRGHRFLAPGPHEVATAADLLGVVEAAHVVSSEQAREAVIREGVAQAEQ 235 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G + L E++ L E V +G+FD+++L +PEE+I + +Q+ F +G Sbjct: 236 RTGARAELPEKTLLEVVNLCEQPTVLVGTFDEEFLRVPEEIIVDAMLMHQRYFPLYDADG 295 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN + I GN RVV ARL DA F++ D Sbjct: 296 KLTNNFIVVSNGDPAHADT-ITGGNERVVRARLSDAKFFYEED----------------- 337 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRA 414 L PL+ + RLD +VVF +GT E+ RI L K +A QL +AD A +RA Sbjct: 338 ---LKHPLETYVDRLD--EVVFQETLGTMKEKADRIVALAKHLAADAQLSEADAADAERA 392 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+KADL T V EF +QG +G YA E+ AI +H +PR + P + + Sbjct: 393 AYLAKADLVTNAVVEFTSVQGVMGSYYAAACGESDQVARAIADHYRPRFSGDEPPASDVG 452 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------LENKIDIPLSQ 527 V++ADKLDT+ +A+ + P+GS DP+ALRR+ +GI+ ++ L ID L Sbjct: 453 RIVAMADKLDTVCGLFAVGQGPTGSSDPFALRRSAIGIVAMLEAGLPVSLAAAIDAALGT 512 Query: 528 FIE-----DQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + + D++ I FF R K+ L D HD ++A+L + I+ L Sbjct: 513 YQDAGIDFDRDAIRAEVADFFVTRTKVMLRDGGCSHDTMDAVLATGVEEPAQIIARTYVL 572 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEK-----KNREISLEISPQYLLLEAEKRLYAVIS 632 E L A F LA ++ ++ +E+ + LL +AE+ L A Sbjct: 573 ---------EAERLGAPEAFDDLATAYARANNLRDADLGVEVD-EALLSDAERALLAATD 622 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + ++E++ + L ++ PI+ FF+ VL+ DD +R+NRL LL + Sbjct: 623 EAAACVKEALAVDHFGAALAALAALRAPIDAFFEDVLIMDDDLALRENRLRLLNRFVAVF 682 Query: 693 LIVINVQKIV 702 V + K+ Sbjct: 683 AHVADFGKMA 692 >gi|113866550|ref|YP_725039.1| glycyl-tRNA synthetase subunit beta [Ralstonia eutropha H16] gi|113525326|emb|CAJ91671.1| Glycyl-tRNA synthetase beta subunit [Ralstonia eutropha H16] Length = 707 Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 210/740 (28%), Positives = 344/740 (46%), Gaps = 83/740 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + + + + L L E ++ + + TP RL + G+ Sbjct: 9 LLIELFTEELPPKALARLGDAFAQGLFAGLGERDLLEPGATVTPFATPRRLAALVSGVRR 68 Query: 62 HSPEKIEERL------------GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 +P++ E+R G K + +S G+ I D Q + G Sbjct: 69 SAPDR-EQREKVLPLSVALDANGEPTAPLAKKLAALAKSVGVAEI-DWQSLERASDGKAE 126 Query: 110 LAVLRKPKRLIEDVLKTIVPV--AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 R R E + I K+P PK M + S ++RP S++ + Sbjct: 127 AFFYRYTARGAELAAAVQAALEDTIAKLPIPKVMSYQRPDG--STVHFVRPAHSLIALFG 184 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 AE I+ + L + N+T GHRF + I++ + Y + LE A ++ R Sbjct: 185 AE-----ILPVTLLGLQASNLTQGHRFLSHGVIEIAHANDYAQRLESAGHVVASYAERRE 239 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 + A L A +++ + LL+E+ LVEW V+ F++ +L +P+E + LT++TNQ Sbjct: 240 RMR-AALLKEAGADQVIMPESLLDEVNSLVEWPVVYACHFEEAFLAVPQECLILTMQTNQ 298 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F +G L N F++VSN+ A++ +I+ GN RVV RL DA F Sbjct: 299 KYFALTDADGHLRNRFLIVSNL-ATETPQSIITGNERVVRPRLADAKFF----------- 346 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA- 406 F+ D K L R+ +L VV+H KIGTQ +RV R++ + IA ++ Sbjct: 347 ---------FDQDRKKTLASRVPQL--ASVVYHNKIGTQLDRVQRLQQIAGHIADALNGS 395 Query: 407 ----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D A R L+KADL T++V EFPELQG +G YA +E A EH +PR Sbjct: 396 GVPTDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDEAEDVALACSEHYRPR 455 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P +S V+LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E + Sbjct: 456 FAGDALPAGAVSTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEKPLA 515 Query: 523 I--------------------PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + P I D F +DR++ YL D+ + +EA++ Sbjct: 516 LSLSSLLALTQQAFAGIAAVKPAPDAIAD-----FLYDRVRGYLKDKGYTTNEVEAVVSL 570 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 D L I+ ++ + F + + E + KRI IL +KN E + P E Sbjct: 571 RPDQLHDILGRMEAVRTFAALPEAEALAAANKRITNIL----RKNTEPVGAVDPALFREE 626 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AE L+A I ++ + + L + + ++ FF+ V+V +D ++R NRL Sbjct: 627 AEGALHAAIERVRPAVEAAFASGDFTAALRDLAQLRDAVDRFFNDVMVMAEDAQLRANRL 686 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL + + V ++ K+ Sbjct: 687 ALLASLHAMANRVADISKLA 706 >gi|325925467|ref|ZP_08186861.1| glycyl-tRNA synthetase beta chain [Xanthomonas perforans 91-118] gi|325544145|gb|EGD15534.1| glycyl-tRNA synthetase beta chain [Xanthomonas perforans 91-118] Length = 746 Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 208/785 (26%), Positives = 346/785 (44%), Gaps = 134/785 (17%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P D+L I+ AI +P PK MRW +++ RP++ ++ + +E Sbjct: 120 VHRAVTPGARTADLLSEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGSE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I+ Sbjct: 175 -----VIPAELLGVRGDRITRGHRFMHEGAVSLAAPGDYVDALRAAHVLVDPDARRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 ++ A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 DEVQAAARQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 290 FPVLDDGGTLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFFFDED--------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 LK+ LS V + AK+G+ ++V+R+ L + IA + AD A Sbjct: 340 LKQGLQAMGEGLSS-------------VTYQAKLGSVADKVARVAALAEAIAPQVGADPA 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI------ 523 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKKLL 506 Query: 524 -------------------------------------------PLSQFIEDQNLILFFHD 540 L+Q +D + F D Sbjct: 507 VEARNQINVQASARQTLKTEAALSKAKDAGAALPKSVEKEAHTALAQSGQDAEIFDFILD 566 Query: 541 RLKLYLHDRDI---RHDLIEAILRPENDNLLTIVDLIKH-----------------LNEF 580 RL+ Y D+ + + + A+ ++ + T + H + F Sbjct: 567 RLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTSVGAHPGATHASLYDFDRRIDAIGIF 626 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY----AVISDFGT 636 + + + + KRI IL K EI +I L AE+ L A I D G Sbjct: 627 ATLPEADALAAANKRIRNIL---RKAEGEIPGDIDTSLLREPAEQALAEAVEAAIGDTG- 682 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V Sbjct: 683 ---DALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKLGDRLGSVA 739 Query: 697 NVQKI 701 ++ + Sbjct: 740 AIEHL 744 >gi|239906721|ref|YP_002953462.1| glycyl-tRNA synthetase beta chain [Desulfovibrio magneticus RS-1] gi|259511922|sp|C4XS54|SYGB_DESMR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|239796587|dbj|BAH75576.1| glycyl-tRNA synthetase beta chain [Desulfovibrio magneticus RS-1] Length = 697 Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 212/724 (29%), Positives = 342/724 (47%), Gaps = 78/724 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL EI EE+PAR +++ + L + V + + TP RL + + L+ Sbjct: 1 MSHFLFEIGFEEMPARFLPGLVDEVKKLFAEGLTQAKVDCGTIAAFATPRRLVVSVPDLA 60 Query: 61 PHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + E GP GA KA +GF + GL +S + PK YLA L Sbjct: 61 AAARREEEVVSGPPEKVGFDAAGAPTKAAEGFAKGQGLD-VSAVFVMDTPK--GRYLA-L 116 Query: 114 RKP---KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 RK + IE +L + A++K+ +PK MRW + F++ RP+ L +L +D Sbjct: 117 RKTTGGEAAIE-LLPALCLEAVKKLSFPKRMRWGSRE-----FAFGRPVHWFLALL--DD 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY---IRDLEEAMVLLDPECRRNA 227 A ++ +I G TYG R P P +V + Y IRD + V+LD R Sbjct: 169 A---VVPFQFDDITSGRATYGQRIMGPGPFEVPTAAAYFDIIRD--KGKVVLDAREREGI 223 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 + + A LA G V + LL E+ GL E V +G FD K+L +P E++ +++++Q Sbjct: 224 VRSQAEALAKEAGGTAVINPALLAEVTGLTEHPVVLLGRFDPKFLDVPREVLITSMESHQ 283 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPN 346 K F +G L F+ + + G +V+ G RV+ ARLEDA FW+ D Sbjct: 284 KSFAVEDGKGGLLPVFL--TTLGLVPGNVELVRRGWQRVLTARLEDARFFWEAD------ 335 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI-RVLGKKIAQLID 405 LS L+ +L+ +VVF A +G+ ++ R+ R+ G Q Sbjct: 336 --------------LSASLETWQKKLE--NVVFLAGLGSMRDKGKRLERLCGLIAEQAGK 379 Query: 406 ADVAL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 ++ L +A L+K DL +++V EF ELQG +G Y+ + ++ + A+ E P GP Sbjct: 380 PEIMLEASQAGGLAKVDLVSDMVGEFAELQGIMGGIYSRRKGQSKTASRAVAEQYLPAGP 439 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 VP +S+ADK DTL + ++ P+G+ DPYALRRA LGI R+++E+ + + Sbjct: 440 DSPVPATLAGAILSIADKADTLAGCFGLDMAPTGAADPYALRRAALGICRVVIEHGLRLD 499 Query: 525 LSQFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 L + ++ L+ FF RLK Y + ++EA L + Sbjct: 500 LMELLQGAIDGYGEVKFKVDRTHVLAKLLDFFGQRLKAYFTGQGYDTLVVEAALGASYTD 559 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AE 624 + + + L F + ++ +L+ KR I+ ++ + L + + LLE AE Sbjct: 560 IAALSARLSALAGFAAKPDFDQAVLTFKRAANIIR-KQGVGAGVPLTGAVKAALLEEQAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K L AV D D Y + +LL+ + ++ FFD V+V DD ++R NRL+L Sbjct: 619 KDLAAVCQDVFPRFDALFDAGDYGAVLELLYELRPSVDAFFDNVMVMCDDMDMRLNRLNL 678 Query: 685 LQYI 688 L+ + Sbjct: 679 LKSL 682 >gi|220917749|ref|YP_002493053.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|254781842|sp|B8JDD8|SYGB_ANAD2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219955603|gb|ACL65987.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 701 Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 207/730 (28%), Positives = 343/730 (46%), Gaps = 69/730 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A L L L + + + +R TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPGALRQLEDDLSKALADARLAHGEVRSVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G A GF RS G++ +S + PK V + + Sbjct: 61 PKQTDARTEAFGPPVAQAYDAEGKPTPAATGFARSQGVE-VSALVRAQTPKGERVAVTKV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K +R E VL ++ + + + K+MR S ++ RP++ ++ +L Sbjct: 120 EKGRR-AEQVLPALLERLVGGLRFRKAMR-----SRFDEATFARPVRWMVALLGG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSL-DHYIRDLEEAMVLLDPECRRNAILNDA 232 + + + E+ G +TYGHRF AP I ++ D Y+ L A VL DP RR A+L + Sbjct: 169 RPLKVRHGEVTSGKVTYGHRFLAPKAIALKGTPDDYLAKLRRAHVLADPVERRAALLAEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R ++ +D L+E+++ LVE +G F+K L LP E++ ++ +Q+ F Sbjct: 229 ARAGKEAAGKVRDDPALVEQVLYLVEEPTAVVGEFEKSNLELPPEVVISEMRNHQRYFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS + D A G RV+ ARL DA F++ D+ Sbjct: 289 VDGKGRLKNRFVAVSATRVKDPAVA-RHGYERVLRARLADARFFFEEDRK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L +R+ D+ F AK+G++ +R RI + +A+ + D + D Sbjct: 338 ----------RRLHERIE--DLGRRTFQAKLGSELDRAQRIGAVASALARALGKDALVAD 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A L+K DL T +V EFPELQG +G YA L+ DAIE+H KP G E +P Sbjct: 386 LLEASRLAKVDLNTGMVGEFPELQGTMGAHYARLEGLKPEIADAIEDHYKPIGAAEELPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V++AD+L +L+ + EK +G+ DP+ LRR+ +GI+RI++ + L+ +E Sbjct: 446 SDLGALVAVADRLHSLVGIIGVGEKATGAADPFGLRRSAIGILRIVIARGYHLSLAAAVE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F R++ +R DL+EA+L +D+ +VD Sbjct: 506 QTLDALSGVKLAAGRAVVAEQVLDFLRGRVRAAWTER-FDADLVEAVLAAGSDD---VVD 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E + AK S F+ +A I+EK + + P L AEK L A + Sbjct: 562 ARRRL-EALADAKARPDFGSLAVAFKRVANIQEKAGGSGAAAVDPALLRDAAEKDLLAAL 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + Y + + ++ + FFD VLV +D +R NRL L++ + + Sbjct: 621 EKVEQEVVARRAARDYPAVLRTVATLEPAVARFFDGVLVMAEDPALRANRLGLMRRVAAL 680 Query: 692 ILIVINVQKI 701 + + +KI Sbjct: 681 FSDLADFRKI 690 >gi|195977628|ref|YP_002122872.1| glycyl-tRNA synthetase subunit beta [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974333|gb|ACG61859.1| glycyl-tRNA synthetase beta chain GlyS [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 680 Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 204/704 (28%), Positives = 346/704 (49%), Gaps = 90/704 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + Y + + TP RL + + GL+ + E+ GP Sbjct: 16 PAYVVTPSEKQLVQRMTDFLKANRLSYNAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGP 75 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KPKRLIEDVLK 125 G KA GF+R GL T+ D + ++ KG+ Y+ V + + + +DVL Sbjct: 76 SKKIALDADGQFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKQAKDVLA 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ ++F +IRP+ S++ +L ++ ++LD +I Sbjct: 133 A-VPEVLASLTFPVSMHWAN-----NSFDYIRPVHSLIVLL-----DDEPLELDFLDIHS 181 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G I+ GHRF + S D Y DL V+ + R+ I+ + + +++ Sbjct: 182 GRISRGHRFLGEE-TSITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDI 240 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D++LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 241 DENLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFIS 300 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A +++GN +V+ ARLED FW+ DQ LS + Sbjct: 301 VRNGNAKHL-QNVIKGNEKVLVARLEDGEFFWREDQK------------------LS--I 339 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADL 422 + +A+L V FH KIG+ E + R +V+ +A L +A+ + V RA + K DL Sbjct: 340 EDLVAKL--AHVTFHEKIGSLAEHMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDL 397 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P K+ ++LADK Sbjct: 398 LTGMVGEFDELQGIMGEKYALLAGEAAAVATAIREHYLPDSAEGELPETKVGAVLALADK 457 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRL 542 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ + F D L Sbjct: 458 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWSIPMDKLIDSLYELSF--DSL 515 Query: 543 KLYLHDRD----------------IRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Y H + I D+ EA+L + + +++ ++++ Sbjct: 516 T-YQHKAEVLDFICARVDKMMGSAIPKDIREAVLASSS---FVVPEMLARAKALVAASQL 571 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH-- 644 + + + + + ++ + +K + ++ S L E +D+ + +++D Sbjct: 572 DTYKPAVESLSRVFNLAKKAVDAVLIDAS----LFE---------NDYERALAQAVDSLV 618 Query: 645 ---KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 Q+ + ++ I+ FFD +V +D +R NRL+LL Sbjct: 619 LSGSAKEQLAQVF-ALSPVIDDFFDHTMVMTEDEAIRRNRLALL 661 >gi|218247137|ref|YP_002372508.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 8801] gi|257060208|ref|YP_003138096.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 8802] gi|218167615|gb|ACK66352.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 8801] gi|256590374|gb|ACV01261.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 8802] Length = 711 Score = 253 bits (646), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 202/726 (27%), Positives = 341/726 (46%), Gaps = 70/726 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA + A + L+E + ++ Y TP RL + ++GL+ H Sbjct: 3 FLLEVGTEELPADFLNGAIAQWQERIPASLQEHFLTPNSITVYGTPRRLAVLIEGLADHQ 62 Query: 64 PEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP A KA +GF R + ++ +I+ KGD + Sbjct: 63 SDRTEVIKGPPAAAAFKDGQPTKAAEGFARKQAVD-VATLEIRPT-DKGDFVFIEKKIAG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R + +L+ ++P I + + MRW + RP++ ++ + E ++I+ Sbjct: 121 RPTKAILQELIPSWINGLEGRRFMRWGD-----GDLRFPRPIRWLVTLCDGEVLPLELIN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 I ++YGHR P P+ + Y L+ V +DP RR I +A Sbjct: 176 GSTT-IISDRVSYGHRILHPEPVSIPHGSEYRETLQSVYVEVDPHERRQTIEAGVKAVAQ 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +G +LL+E+ LVE+ G FD+++L LP E+I + T+Q+ F + ++G Sbjct: 235 TLGGTAEIYPELLQEVTNLVEYPTAVPGKFDEEFLELPTEVITTVMVTHQRYFAVKDQQG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI +SN + I GN RV+ ARL DA F + Sbjct: 295 SLLPNFITISNGDRTKS-EIIAAGNQRVIRARLADAQFF--------------------Y 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRA 414 + D S+PLD + +L+ V F ++GT ++V RI + ++IAQ L ++ Sbjct: 334 HADCSEPLDTYLPQLET--VTFQNELGTMRDKVDRIMEIAQQIAQQLNLTPQQWDEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L K DL T++V EFPELQG +G++YA++ E+ S I EH PRG + +P + Sbjct: 392 AMLCKVDLVTQMVYEFPELQGIMGQKYALVSGESESVAQGIFEHYLPRGADDIMPQSLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----- 529 V LAD+LDTLI+ + + P+GS DP+ALRRA +I I +++ I L+Q + Sbjct: 452 QVVGLADRLDTLISIFGLGMIPTGSSDPFALRRAANAVINITWNSQLSINLAQLLAQGCA 511 Query: 530 ------EDQNLIL-----FFHDRLKLYLHDR-DIRHDLIEAILR---PEN-----DNLLT 569 +D+ L FF R++ L + + +DL+ A+L PE ++LL Sbjct: 512 DFITGHQDKTSPLEPLKGFFIQRIQTLLQEELKLDYDLVNAVLGDNDPEYQERALEDLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRL 627 + D + L E ++ + E+ + R ++ A +E+ ++PQ +E Sbjct: 572 VRDRAQFLQEIRNNGQLERIYETVNRSTRLAAQGNLGFQELDPRKTVNPQLFQQRSENAF 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVRDNRLSL 684 Y + + + Y + + L I + FF D VLV +D ++R NRL+L Sbjct: 632 YQELIVLLPETLAAKSQRNYQLLVNGLTEIAPTVSNFFDGEDSVLVMDEDPKIRQNRLNL 691 Query: 685 LQYIKN 690 L ++N Sbjct: 692 LGILRN 697 >gi|332529556|ref|ZP_08405513.1| glycyl-tRNA synthetase subunit beta [Hylemonella gracilis ATCC 19624] gi|332040994|gb|EGI77363.1| glycyl-tRNA synthetase subunit beta [Hylemonella gracilis ATCC 19624] Length = 734 Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 223/762 (29%), Positives = 357/762 (46%), Gaps = 95/762 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K E + +L L+ +G+ + + Y +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALKKLGEAFASVLAEQLRAQGLASADSVVTPYASPRRLAAHVTAVV 64 Query: 61 PHSPEK-IEERLGP-RVG--AGKKAIDGFLRSTGLQT----ISD-----CQIKKDP-KKG 106 + +K ++++L P VG A +A L+ LQ +SD +K+ P K Sbjct: 65 GKAADKAVQQKLMPVSVGLDAAGQATPALLKK--LQALGADVSDTAKAVAGLKRAPDGKA 122 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWS-TTHSPI---SAFSWIRPLKSI 162 + P ++ L+ + AI K+P PK M + T + S+ +++RP + Sbjct: 123 EALFYDSVVPGATLDAGLQKALDEAIAKLPIPKVMSYQLETDCELPGWSSVNFVRPAHGL 182 Query: 163 LCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKV-QSLDHYIRDL-EEAMVLLD 220 + + ++ + + GN T GHRF A + V + D Y L ++ V+ Sbjct: 183 VAL-----HGSSVVPVQALGLKAGNSTRGHRFEAKKDVVVLKDADGYAAALRDDGAVIAS 237 Query: 221 PECRRNAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 RR I+ AS VG +ED+ LL+E+ LVE V + F+K++L +P+E Sbjct: 238 FAERRAEIVRQLAAAASKVGGGARPIEDEALLDEVTALVERPNVLVCEFEKEFLAVPQEC 297 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT+K NQK F G L N F++VSNI +D +A++ GN RVV RL DA F+ Sbjct: 298 LILTMKANQKYFPLLDASGRLTNKFLVVSNISPADA-SAVIGGNERVVRPRLADAKFFFD 356 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +D+ K L+ R+ L VV+H K+GTQGERV R+R + K Sbjct: 357 QDRK--------------------KTLESRVEGLG--KVVYHNKLGTQGERVERVRAIAK 394 Query: 399 KIAQ-LIDAD-VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 IAQ L DA VA D A L+K DL T++V EFPELQG +G YA AIE Sbjct: 395 AIAQQLGDAKLVAAADTAARLAKTDLLTDMVGEFPELQGIMGGYYARHDGLGEEIAHAIE 454 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 +H KPR + +P N + + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR++ Sbjct: 455 DHYKPRFAGDELPRNTVGLVVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRML 514 Query: 517 LENKIDIPLSQFIE------DQNLIL------------------------------FFHD 540 E + + L + I DQ L+L F +D Sbjct: 515 GEKNLALDLDKLISSARQVIDQFLLLKVVQAGLPALDKSSNPQNNERPDVAAALSDFIYD 574 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 RL L ++ ++A+L L + + + F + + + KRI IL Sbjct: 575 RLAGSLREQGYSAQEVDAVLALRPQRLGEVPKRLTAVRAFAALPEAAALAAANKRIGNIL 634 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 +K + ++ L AEK L+ + + Y L + P Sbjct: 635 ---KKAEGVVEAKVDAALLKESAEKALHGALHSVQPLADSLYANGEYAASLRELAVLKAP 691 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ FFD V+VN +D +R NRL LL+ + + V ++ ++ Sbjct: 692 VDAFFDGVMVNAEDPALRANRLGLLKSLHEAMNRVADLSRLA 733 >gi|319788543|ref|YP_004148018.1| glycyl-tRNA synthetase subunit beta [Pseudoxanthomonas suwonensis 11-1] gi|317467055|gb|ADV28787.1| glycyl-tRNA synthetase, beta subunit [Pseudoxanthomonas suwonensis 11-1] Length = 724 Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 200/748 (26%), Positives = 335/748 (44%), Gaps = 104/748 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV R +TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVVAALQKRGVAVDATGARPLYTPRRLAVLLPGVAV 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G +A++GF G L+ SD KG+ + Sbjct: 67 EQPEQHSEVLGPYLNIALDAEGKPTRALEGFAAKAGVEWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + KP ++L +V AI +P PK MRW +++ RP+ ++ +L E Sbjct: 120 VHRSVKPGARTAELLPEVVSEAIAGMPVPKPMRWGGHD-----YAFARPVHWLVLLLGNE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 ++ + + G + GHRF ++ + YI L A VL+DP RR I+ Sbjct: 175 -----VVPAQVLGVASGRSSRGHRFEHDQAVEFAAPGDYIEALRAARVLVDPAERRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A + A+ G +D LE+++ L EW + SF++ +L +P+E + T++ NQK Sbjct: 230 EQAEQAAARAGGSARITEDNLEQVVCLTEWPAAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI +NI++ D A + +G RV+ R DA F+ D Sbjct: 290 FPVLDAAGKLTEYFIGTANIESRDV-AEVSKGYERVIRPRFADARFFFDED--------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 LK+ + L V + AK+GT ++V+R+ L + IA + AD A Sbjct: 340 LKQGLVAMGEGLKT-------------VTYQAKLGTVADKVARVAALAEAIAPQVGADPA 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA+ E AI+E PR + + Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYALAAGEPQEVALAIDEAYMPRFSGDAIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL---- 525 ++++ +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ ++ L Sbjct: 447 SSRLGQVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTLIESGFELDLLRLL 506 Query: 526 ----------SQFIEDQNLIL---------------------------------FFHDRL 542 Q ++D I F DRL Sbjct: 507 EASLARIQHHIQLVQDNQAIAAIKSAQASGIETNKKLPPKQPVDIEALGPELYDFILDRL 566 Query: 543 KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 + Y D+ + A+ + +L + I + F + + + + KRI IL Sbjct: 567 RGYYADKGVPAAHFNAVAELKPASLADLDTRIAAIGTFAALPEADALAAANKRIGNIL-- 624 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 +K + I P +AE+ L + + Y ++ + L + ++ Sbjct: 625 -KKADIAIPAMEDPALFAEDAERALGEAVEAALGDTDGPLQQHDYVRVLERLARVRPQVD 683 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKN 690 FFDQV+VN +D VR NRL+LL+ + + Sbjct: 684 AFFDQVMVNAEDPAVRGNRLALLKRLAD 711 >gi|269962698|ref|ZP_06177043.1| glycyl-tRNA synthetase beta subunit [Vibrio harveyi 1DA3] gi|269832621|gb|EEZ86735.1| glycyl-tRNA synthetase beta subunit [Vibrio harveyi 1DA3] Length = 688 Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 202/699 (28%), Positives = 326/699 (46%), Gaps = 62/699 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAALADS 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G D + KG+ L Sbjct: 64 QSDKVVEKRGPAVSAAFDAEGNPTKAAQGWAR--GCDITVDQAERMVTDKGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 ENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------------ 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 333 --FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIGADVEKSKRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N +S Sbjct: 389 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSNGVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 449 TAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAKAKS 507 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +Q++I F R + + D D+I+A+L +K ++ Sbjct: 508 LFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKAVSH 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E++ +I L +AEK L + ++ Sbjct: 568 FRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTEALE 624 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 PAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 663 >gi|257063815|ref|YP_003143487.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Slackia heliotrinireducens DSM 20476] gi|256791468|gb|ACV22138.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Slackia heliotrinireducens DSM 20476] Length = 694 Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 212/729 (29%), Positives = 334/729 (45%), Gaps = 77/729 (10%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 EI +EE+PA H A L ++ LL+ + + + + Y TP RL + + P + E Sbjct: 8 FEIGTEELPAFALHDATVQLPGLVAQLLEAKRIPHGAIDVYTTPRRLITLVADV-PEATE 66 Query: 66 KIEERL-GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 EE GP G KA GF R G+ S +++ + + VY AV + Sbjct: 67 ASEEVFRGPAARIAFDADGNPTKAALGFARGKGVDA-SALELRNENGEDYVY-AVKKTES 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R + +L ++ I+ + WPKS RW H+ + + RP++ IL +L E ++ Sbjct: 125 RDVAALLPEVLLNTIEGISWPKSQRWGA-HTEL----FSRPIRWILALL-----GETVVP 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L + G T GHRF AP +++ D + + A V+ + R +I + Sbjct: 175 LSYAGLESGRTTRGHRFLAPAEVEIACADDLLPAIRAAYVVPSEDEREASIRKQIAAKEA 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +GL + E+I L E+ V +G+FD+ +L +P+E+I + +Q+ F +EG Sbjct: 235 ELGLVADLPAKTMAEVINLTEYPTVMVGTFDELFLSVPKEIIVDAMLMHQRYFPLFDQEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++ SN + A I+ GN RVVAARL DA F+ D Sbjct: 295 KLVNKFLITSNGDPA-FEANIIDGNQRVVAARLYDAKFFYDED----------------- 336 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADV-ALVDRA 414 L KPL+ + LD VVF K+GT + +R+ L A +DA V A RA Sbjct: 337 ---LKKPLEDYVNSLDQ--VVFQEKLGTTLAKTTRVVRLAGFAADDAKVDAQVRADAQRA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+KADL T V EF +QG +G YA E +AI +H +PR + +P Sbjct: 392 AYLAKADLVTGAVVEFTSVQGIMGSYYAKAAGETDEVANAIADHYRPRFAGDELPRGMAG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------LENKIDIPLSQ 527 V+ ADKLDT+ +AI + P+GS DP+ALRRA +GI+ I+ L + ID+ L+ Sbjct: 452 RIVAFADKLDTITGLFAIGQAPTGSSDPFALRRAAIGIVGILNAGLNVSLGSAIDVALAN 511 Query: 528 FIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + D + ++ FF R K+ L D D I+A+L I +K L Sbjct: 512 YRADGLEFDFAEVKKAVVDFFVTRTKVILKDEGNASDAIDAVLACGVTEPAVIASRVKAL 571 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKN---REISLEISPQYLLL-EAEKRLYAVISD 633 ++A+ + + LA+ + R+ L L +AE+ LY Sbjct: 572 ----TAAREQN-----RETMDNLAVAFARANNLRDPKLGTDCNTALFNQAEQNLYDAAHA 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + E++ Y L + +P++ FF+ V+V +D VR NRL LL N+ Sbjct: 623 ASIAVDEALAADDYTAALGRLAELRQPVDAFFEDVMVMDEDSAVRVNRLKLLNEFVNVFA 682 Query: 694 IVINVQKIV 702 V + ++ Sbjct: 683 NVADFGQLA 691 >gi|156972784|ref|YP_001443691.1| glycyl-tRNA synthetase subunit beta [Vibrio harveyi ATCC BAA-1116] gi|166227931|sp|A7N1D8|SYGB_VIBHB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|156524378|gb|ABU69464.1| hypothetical protein VIBHAR_00449 [Vibrio harveyi ATCC BAA-1116] Length = 693 Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 203/704 (28%), Positives = 329/704 (46%), Gaps = 67/704 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAALADS 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 64 QSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGQPTSQIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F + Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVYS 291 Query: 295 REGVLAN-----CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 E N FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 HENGDENKKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------- 337 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 -------FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIGADVE 388 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P Sbjct: 389 KSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELP 448 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +N +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 449 SNGVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLV 507 Query: 530 E---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +Q++I F R + + D D+I+A+L + Sbjct: 508 AKAKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRV 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 568 KAVSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVM 624 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 TEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 668 >gi|163802139|ref|ZP_02196034.1| glycyl-tRNA synthetase subunit beta [Vibrio sp. AND4] gi|159173944|gb|EDP58754.1| glycyl-tRNA synthetase subunit beta [Vibrio sp. AND4] Length = 698 Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 205/709 (28%), Positives = 327/709 (46%), Gaps = 72/709 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L+ Sbjct: 4 EFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAALADS 63 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V A KA G+ R G+ ++ D KG+ L Sbjct: 64 QSDKIVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQADRMVTD--KGEWLLFKQEV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ + A+ +P K MRW + +IRP+K+ L +L+ D + Sbjct: 122 KGKPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKT-LTMLMGSD----L 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF + S + Y LEE V+ D E R+ IL DA + Sbjct: 172 IEGEILGVASARTIRGHRFMGEQEFTIDSAEQYPTLLEERGKVMADYEARKAIILADAQK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+AVG + DL+EE+ LVEW V F+++YL +P E + T+K +QK F + Sbjct: 232 AAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEYLKVPSEALVYTMKGDQKYFPVYS 291 Query: 295 REGVLAN-----CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 E N FI VSNI++ + +++GN +VV RL DA F Sbjct: 292 HENGDKNRKLLPNFIFVSNIESKEP-RYVIEGNEKVVRPRLADAEFF------------- 337 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 FN D +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 338 -------FNTDRKRPLIDRLPELEQ--AIFQKQLGTIKDKTDRITELAGYIAEQIGADVE 388 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P Sbjct: 389 KSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDKLP 448 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +N +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E + L + Sbjct: 449 SNGVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYHLDLVDLV 507 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 +Q +I F R + + D D+I+A+L Sbjct: 508 AKAKSLFAQEDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSIDIIQAVLARRPTKPAD 567 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +K ++ F E + KR+ ILA K + E++ +I L AEK L Sbjct: 568 FDQRVKAVSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQENAEKALAE 624 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 + ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 625 SVEVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALK 673 >gi|308234593|ref|ZP_07665330.1| glycyl-tRNA synthetase, beta subunit [Atopobium vaginae DSM 15829] gi|328944350|ref|ZP_08241814.1| glycyl-tRNA synthetase beta subunit [Atopobium vaginae DSM 15829] gi|327491269|gb|EGF23044.1| glycyl-tRNA synthetase beta subunit [Atopobium vaginae DSM 15829] Length = 698 Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 219/745 (29%), Positives = 355/745 (47%), Gaps = 100/745 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI +EE+P+ A + L ++ L++ G+ + ++ + +P RL + + L+ Sbjct: 6 EFLLEIGTEEMPSAPLIHATKQLVQLMQAHLQKSGLTFGSVEAHQSPRRLAVLVHDLAAQ 65 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-----L 110 +PE E + GP KA GF + G+ I+K + G Y Sbjct: 66 TPEINEIKRGPAASIAFDANKQPTKAALGFAKKCGVDAHD--LIEKTAEDGKNYVFAQKF 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVA 168 R + L+ D+ IV + WP +S RW+ S++RP++ ++ +L Sbjct: 124 IAARTAQELLGDMCHDIVA----SLEWPNYRSQRWA-----FETESFVRPVRWLVALL-- 172 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRF--HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 E++I + T GHR H H I +Y L +A VLL+ E RR Sbjct: 173 ---DEEVIPFSYAGVSSSCTTQGHRVLGHGSHTIDCPG--NYRSILRDAGVLLEDE-RRQ 226 Query: 227 AILNDAHRLA-SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 IL++ + L + K EE+I L E+ +V +GSFD+++L +P E+I ++ T Sbjct: 227 KILDEVAAFEHTHPQLHVDMPKKTFEEVINLCEYPRVLIGSFDQEFLDVPHEIICESMLT 286 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 NQ+ F T++G L F++VSN AS AI+ GN RVV ARL+DA F Sbjct: 287 NQRYFPIYTKDGELTRDFVIVSNGAAS-ADKAIIDGNERVVRARLDDAKFF--------- 336 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 F DL PLD+ + RL VVF K+G+ ++ +R+ L A+L+ Sbjct: 337 -----------FEEDLKHPLDEYVPRLS--KVVFQEKLGSVLDKTNRMTKLILVCAELLK 383 Query: 406 AD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 AD L +RA L+KADL T V EF QG +G YA E+ C AI +H +PR Sbjct: 384 ADDELTKLCERAAYLAKADLVTNAVVEFTSQQGVMGGYYARAMGEDPRVCKAIAQHYRPR 443 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------ 516 + P + + V+L DKLDT+ +AINE P+GS DP+A RR+ LGII I+ Sbjct: 444 FSKDVTPDDFVGKLVALVDKLDTICGMFAINEPPTGSSDPFAQRRSALGIIAILQELPSC 503 Query: 517 -LENKIDIPLSQFIEDQNLIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPEN 564 L++ ID L+ F E Q L FF RL+ ++ + + I AI Sbjct: 504 SLKSLIDAALNLFKE-QGLDFDVPAVSACVCEFFSVRLQALAKEQSVSAESISAIAAIGI 562 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS-------LEISPQ 617 + ++ F SA+ + ++F+ LAI + ++ + +S Sbjct: 563 IDPREFFARVQA----FDSARTRE-----PQLFEDLAIAFARASHLTDASLGTDVNVS-- 611 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 +L AE++L+ S+ ++++++ + Y + L + EPI+ FF+ V + DD E+ Sbjct: 612 -ILTPAEQQLFTACSNGRDNVEKALSNGEYARALASLAELREPIDQFFNDVRIMDDDTEI 670 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R+NR LL ++ V ++ + Sbjct: 671 RNNRFRLLNTFTSVFSKVADIAALT 695 >gi|89902455|ref|YP_524926.1| glycine--tRNA ligase [Rhodoferax ferrireducens T118] gi|89347192|gb|ABD71395.1| Glycine--tRNA ligase [Rhodoferax ferrireducens T118] Length = 744 Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 196/617 (31%), Positives = 297/617 (48%), Gaps = 77/617 (12%) Query: 131 AIQKVPWPKSMRWS-TTHSPISAFS---WIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 AI K+P PK M + T + +S ++RP ++ + + K++ L G Sbjct: 159 AIAKLPIPKVMSYQLETDCELPGWSSVNFVRPAHGLVALRGSTVVPVKVLGLK-----AG 213 Query: 187 NITYGHRFHAP-HPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVG--LE 242 N T GHRF A P+ + D Y LE+ V+ E RR AI+ + A +G Sbjct: 214 NSTQGHRFEAKVSPVVIADADSYAATLEQDGAVIAGFEQRRFAIVQQLAQAAERLGPSYR 273 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 ++ D+ LL+E+ GLVE V + +FD ++L +P+E + LT+K NQK F G L N Sbjct: 274 VLMDEALLDEVTGLVERPNVLVCAFDAQFLDVPQECLILTMKANQKYFPLLDAAGKLTNQ 333 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI D +A++ GN RVV RL DA F+ DQ+ L+S E LS Sbjct: 334 FLVVSNISPLDA-SAVIGGNERVVRPRLADAKFFF--DQDRKKTLASRVEG-------LS 383 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA-QLIDADVA-----LVDRAIV 416 K VV+H K+GTQGER R++ + IA QL DA VA D A + Sbjct: 384 K-------------VVYHNKLGTQGERTERVQSIASAIARQLADAGVADAFDGNADNAAM 430 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL T++V EFPELQG +G YA AIE+H KPR + +P N + Sbjct: 431 LAKADLLTDMVGEFPELQGIMGGYYARHDGLREDIAFAIEDHYKPRFAGDELPRNTTGLV 490 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---------- 526 V+LADKL+TL+ + I P+G KDPYALRR LG+IR+++E ++ + L+ Sbjct: 491 VALADKLETLVGMFGIGNVPTGDKDPYALRRHALGVIRMLVEKELPLDLNGLLACAFEEP 550 Query: 527 ---------------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +F + L F DRL L ++ ++A+L + Sbjct: 551 RWGTAFKAGTDLGAAAPSVYQKFDAARPLADFIFDRLAGSLREQGYSAQEVDAVLALQPQ 610 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 L I + + F + + + KRI IL KK ++ +S L AE Sbjct: 611 RLGDIPKRLAAVRAFAALPEAPALAAANKRISNIL----KKAPDVDPHVSEVLLTEPAEL 666 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A + + Y L ++ P++ FFD VLVN + ++R NR LL Sbjct: 667 ALFAAMQSLAPLANAQFEALDYTASLQTLAALRAPVDAFFDSVLVNAEQLDLRLNRQGLL 726 Query: 686 QYIKNIILIVINVQKIV 702 + + + + V ++ ++ Sbjct: 727 KSLHSAMNRVADLARLA 743 >gi|190576418|ref|YP_001974263.1| glycyl-tRNA synthetase subunit beta [Stenotrophomonas maltophilia K279a] gi|190014340|emb|CAQ47987.1| putative glycine-tRNA synthetase, beta subunit [Stenotrophomonas maltophilia K279a] Length = 691 Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 201/708 (28%), Positives = 329/708 (46%), Gaps = 61/708 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + + R TP RL + L G+ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVVEGLRKRGVALELGDARPLSTPRRLAVLLPGVGL 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 PE+ E LGP + G KA+ GF G+ K KG+ ++ Sbjct: 67 EQPEQHSEVLGPYLNIALDAEGQPTKALQGFAAKAGIDWT--ALEKTTDNKGERFVHRAV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P +L I+ AI +P PK MRW A+ + RP ++ + A Sbjct: 125 TPGASTASLLPEILREAIAAMPIPKPMRWGD-----HAWGFARPAHWLVLLHGA-----N 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +L + G ++ GHRFH + + Y+ L A VL+DP RR I+ + Sbjct: 175 VVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVLVDPSERRARIVAEVEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 AAAKAGGSARITDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI+ S A + +G RV+ R DA F+ D L S+ E Sbjct: 295 AAGTLTEKFIGIANIE-SKNVAEVAKGYERVIRPRFADAKFFFDEDLKQ--GLVSMGEG- 350 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + V + AK+G+ ++V+R+ L + IA + AD A RA Sbjct: 351 -------------------LKTVTYQAKLGSVADKVARVAALAEVIAPQVGADAAQARRA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL + +V EFPELQG G+ YAV E+ AI+E +PR +++ + + Sbjct: 392 AELAKNDLQSRMVNEFPELQGIAGRHYAVAGGESAEVALAIDEAYQPRFGGDDIALSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +++A+++DTL +A KP+G+KDP+ALRR LG+ R I+E+ ++ L + N Sbjct: 452 KVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRALLASANA 511 Query: 535 IL--------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 L F DRLK Y D+++ A+ + +L + + F Sbjct: 512 GLAARNVQADVGELYDFILDRLKGYYGDKNVPATHFNAVAELKPVSLYDFDRRLDAIGTF 571 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KRI IL K +I +I P L +AE+ L ++ Sbjct: 572 AALPEAEALAAANKRIRNIL---RKAEGDIPAQIDPALLQEDAERALAEAVTAAIDDTGA 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 S+ K Y + L + ++ FFD V+VN +D +R NRL+LL + Sbjct: 629 SLHQKDYVAVLARLARLRPQVDAFFDGVMVNAEDPALRGNRLALLTML 676 >gi|319651590|ref|ZP_08005717.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. 2_A_57_CT2] gi|317396657|gb|EFV77368.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. 2_A_57_CT2] Length = 690 Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 204/729 (27%), Positives = 354/729 (48%), Gaps = 74/729 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR + LS + L E+ + + + + +P RL + + G+ Sbjct: 5 DLLLEIGLEEMPARFVTNSMNQLSDKVNSWLLEKKISFDEISAFSSPRRLAVLVTGVDTA 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF R G ++ D K+ G Y V + Sbjct: 65 QEDINEEAKGPAKKIALTEDGEWSKAAVGFSRGQG-ASVEDIFFKE--INGVEYAHVSKF 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K L + + + +PK+MRW+ +IRP+K ++ + E + Sbjct: 122 IKGKETAALLPELQQIVTSLSFPKNMRWANQE-----LRFIRPIKWLMALFGNE-----V 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + N+T GHRF I++ + Y + L V+ +P+ R++AIL+ ++ Sbjct: 172 IPFAITNVHTSNLTRGHRFLGEE-IEINNPSDYEKSLLAQYVITNPQERKSAILSQLQKI 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + D+DLLEE+ LVE+ G F+++YL LPEE++ ++K +Q+ F +++ Sbjct: 231 EEENDWVIPVDEDLLEEVNNLVEYPTALYGQFEEEYLELPEEVLITSMKEHQRYFPVKSK 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L F+ V N + + + +GN +V+ ARL DA F++ DQ Sbjct: 291 EGRLLPYFVTVRN-GSHEHLEKVAKGNEKVLRARLSDAAFFYREDQKT------------ 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVD 412 D++ L++ + ++V+H +IGT E+V R+R L +++ D A+ D Sbjct: 338 ----DIAASLEK------LKNIVYHEEIGTLAEKVERVRQLAANLSENLHFSDEAKAVTD 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +SK DL + +V EFPELQG +G++YA+ + E + AI EH PR + P + Sbjct: 388 RAAEISKFDLVSHMVYEFPELQGFMGEKYALQKGEKEAVARAINEHYMPRNAEDQTPASD 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 +S+A+KLDT+++ +AI PSGS+DPYALRR G+I+ +L D+ L + I Sbjct: 448 AGAVLSIAEKLDTIVSSFAIGIIPSGSQDPYALRRQATGVIQTLLAKNWDLKLEELIALS 507 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 Q L+ FF R+K L ++ +R+DLIEA+L E ++ ++V Sbjct: 508 SETVLNSKIGKKSKGELMQELVSFFKLRIKYMLQEKTVRYDLIEAVLGSEIGSVPSLVKR 567 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L +A ++ + + R+ I + E K +I EK L+ Sbjct: 568 AEVLESHKDAAGFKESIEALSRVINIASKAEDKG-----DIDSSLFENVYEKSLFNKYLS 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++ + + +LL S+ I+ +F+ +V + +E+R NRL + + ++I Sbjct: 623 VNEELRKEVAEEAAF---NLLISLKPEIDQYFEHTMVMDEKQEIRSNRLHQMANLADLIK 679 Query: 694 IVINVQKIV 702 N+ +I+ Sbjct: 680 KFANMNEII 688 >gi|218885395|ref|YP_002434716.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226737048|sp|B8DPG1|SYGB_DESVM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218756349|gb|ACL07248.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 701 Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 212/722 (29%), Positives = 335/722 (46%), Gaps = 70/722 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI EE+P+R +L+ L ++GV ++++R TP R + ++G++ Sbjct: 1 MSQFVLEIGFEELPSRFLPGLERELAERFARALDDDGVEHESIRVLTTPRRAAVLIEGIN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E E GP V G KA +GF R+ G+ + D KG+ Y+AV Sbjct: 61 PVQREAEEVVPGPPVRVAFDAEGKPTKAAEGFARTQGVDMADIFTLSTD--KGE-YIAVR 117 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ D++ T P + +P+PK MRW + F++ RPL+ +L + Sbjct: 118 KRTGGANAADLIATACPTVVAALPFPKRMRWGSGD-----FTFGRPLRWLLALF-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRD-LEEAMVLLDPECRRNAILND 231 + ++ ++ + G +T+GHR H P+ V+S D Y+ +E+ V DP RR IL Sbjct: 168 DAVVPFEVGGVVSGGVTWGHRIHGAGPLVVKSADDYLNVVIEKGGVTPDPAERRAMILAG 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A A G ++ + LL+E+ GL E +G D +L LP E++ +++++QK F Sbjct: 228 GNAAAEAAGGRILWKESLLDEVQGLAEHPVPLLGDIDPSFLELPREVLLTSMESHQKSFG 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F+ V N+ D A + +G RV+ ARLED FWK Sbjct: 288 VEGPDGALLPHFLTVLNLTPLDV-ALVKKGWERVLRARLEDGRFFWK------------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVAL 410 DL+ D +A LD +V+F +G+ G++ R+ L +A+ AD + Sbjct: 334 -------TDLAASFDAWLAELD--NVIFLGPLGSMGDKTRRLEKLCAWLAKAAGVADESA 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL +E+V EF LQG +G YA E + A+ E P GP VP Sbjct: 385 CARAGRLSKADLVSEMVGEFDTLQGIMGGIYARRMGEPETVAAALAEQYLPAGPDSPVPA 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S+ADK DT+ + + P+G+ DPYALRR LGI RI+LE+ + I + + Sbjct: 445 TLAGALLSIADKADTMAGCFGLGMIPTGAADPYALRRCALGIARIVLEHGLRIDVRELFR 504 Query: 531 DQ------------------NLILFFHDRLKLYLHDRDIRHDLIEAIL---RPEND--NL 567 L FF RLK + L+EA L PE ++ Sbjct: 505 TALALYGERAWKLAPAEALVKLEEFFMARLKNHFMAAGHETLLVEAALAADTPEGAGIDV 564 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKR 626 + L++F +L+ KR I+ + ++ + LL E AEK Sbjct: 565 RAAGARLAALSDFSRRDDFGSAVLTFKRAANIIRKQGQEGGAVLDGAYSHALLAEDAEKA 624 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L A + + + + LL + ++ FFD V+V DD VR NRL+LL+ Sbjct: 625 LAARLEEVAPRFDALWAADDFASLFGLLGELRPAVDAFFDGVMVMCDDAAVRTNRLNLLK 684 Query: 687 YI 688 + Sbjct: 685 AL 686 >gi|225869069|ref|YP_002745017.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. zooepidemicus] gi|259511932|sp|C0MDQ3|SYGB_STRS7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225702345|emb|CAX00162.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. zooepidemicus] Length = 679 Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 173/527 (32%), Positives = 269/527 (51%), Gaps = 47/527 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK+ + Y + + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLVQRMADFLKDNRLSYDAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T+ D + ++ KG+ Y+ V + + Sbjct: 75 SKKIALDADGQFSKAAQGFVRGKGL-TVDDIEFRE--VKGEEYVYVTKHEAGKQAKGVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 VP + + +P SM W+ ++F +IRP+ S++ +L ++ ++LD +I G Sbjct: 132 AVPEVLASLTFPVSMHWAN-----NSFDYIRPVHSLIVLL-----DDEPLELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF + S D Y DL V+ + R+ I+ + + +++ D Sbjct: 182 RISRGHRFLGEE-TSITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLED FW+ DQ F DL L Sbjct: 301 RNGNAKHL-QNVIKGNEKVLVARLEDGEFFWREDQK-------------LFIEDLVAKLA 346 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLC 423 V FH KIG+ E + R +V+ +A L +A+ + V RA + K DL Sbjct: 347 H---------VTFHEKIGSLAEHMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEAAAVATAIREHYLPDSAEGELPETKVGAVLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWSIPMDKLID 504 >gi|88606787|ref|YP_504651.1| glycyl-tRNA synthetase, beta subunit [Anaplasma phagocytophilum HZ] gi|88597850|gb|ABD43320.1| glycyl-tRNA synthetase, beta subunit [Anaplasma phagocytophilum HZ] Length = 701 Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 200/736 (27%), Positives = 353/736 (47%), Gaps = 79/736 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D + EI E++P++M A L + + + +N R + +R+ +GL Sbjct: 4 DLVFEILCEQMPSKMMDIALGYLKNTICSGFSKFAIESRNSRTLVSANRICFIAEGLEQG 63 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP--KRLI 120 + + +E GPRV + +++I GFLR G + + +++ + + Y +V L Sbjct: 64 NSTENKEIKGPRVSSSQESIAGFLRKVGKSEVGELEVR-NIGGVEFYYSVRESVGVNNLN 122 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E V + I+ A+ P K M+W W+RP+ ++ C+L E ++ + + Sbjct: 123 EKVCE-ILQDAVDNFPLHKRMKWGC-----GIGEWVRPVLNVACVLGGE-----VVPVTV 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 NITYG+ A P + +D Y+ L E MV+LD E RR +IL + Sbjct: 172 AGSKANNITYGNIRFAKTPHTINGVDSYLSFLSENMVMLDHEERRRSILRQLDEQIAGTL 231 Query: 241 LEL-VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 L+ V DK ++EE+ G++E+ +V +GS D+K++ LP E++ + +Q+C G + Sbjct: 232 LKYDVHDK-IIEELNGMLEYPKVLLGSVDEKFMSLPREVVACVLTKHQRCLAIYDSSGRI 290 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 + S I +++ + V+ ARL DA+ ++D+ ++ L Sbjct: 291 VKFASVASVINER-----VIKIHEMVLRARLSDAMFLIEKDK--------------QYGL 331 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLS 418 D R + ++VF +G+ ++V+RI L K + + A + V+RA +LS Sbjct: 332 D--------RYREQLANIVFKRDLGSVLDKVNRISALAKYASVWVPRAHMLEVERASLLS 383 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V+EFPELQGK+G+ YA E + CDA+EEH P + P++ + I +S Sbjct: 384 KADLASLMVKEFPELQGKMGRYYAQHAGEESAVCDALEEHYLPSSQQDRCPSSPVGIALS 443 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------ 532 +ADK+DTL+ A E+ SGS+DP+ALRR + ++R+I EN I IPL + Sbjct: 444 IADKVDTLVGLMA-TERISGSRDPFALRRTAIALLRVIKENCISIPLDLMVSKSVSFYLC 502 Query: 533 ---------------------NLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 +LIL F ++RLK+ L + + D++ ++ +D LL Sbjct: 503 DAKKNKDLKSVFRSVDVDCITSLILDFCYERLKIILREEGLDRDIVNIVVGEFHDILLVK 562 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQIL----AIEEKKNREISLEISPQYLLLEAEKR 626 + L+E+ + G+ L + +RI +L ++ K+ R S + + E Sbjct: 563 KKAVI-LSEYLKTEDGKNILAAYRRIRNVLLKGSSVPVKEKRIWYKWCSEKLCIESCEIE 621 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR-EVRDNRLSLL 685 LY I + + + D L ++ + F D+V V+ D E R NR++L Sbjct: 622 LYRKAKHCDGVISSVLKAHSFKEAMDCLANMSSVVNDFLDKVRVHDDGSIETRKNRVNLS 681 Query: 686 QYIKNIILIVINVQKI 701 ++ ++ VI+ KI Sbjct: 682 LWVVSLYNSVIDFSKI 697 >gi|254468463|ref|ZP_05081869.1| glycyl-tRNA synthetase, beta subunit [beta proteobacterium KB13] gi|207087273|gb|EDZ64556.1| glycyl-tRNA synthetase, beta subunit [beta proteobacterium KB13] Length = 693 Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 206/713 (28%), Positives = 360/713 (50%), Gaps = 68/713 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIEE-R 70 P Q + ++ L+ + L + N + Y TP R+ + + SP+++ E + Sbjct: 16 PPSSQKQMSDFLATEIFNQLNQNKFTTSNSKLNIYSTPRRIGFKISHTATKSPDELTEIK 75 Query: 71 LGPR-VG-AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL----IEDVL 124 L P+ +G +A ++ L++++ +K + VL K + I + + Sbjct: 76 LMPKKIGWVDDQAAAPLIKK--LESLNLIDLKDSLDNFIIQDEVLYAKKNIEGTSIVEFI 133 Query: 125 KTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIP 184 + + ++K+P K M + S ++ RP +++C+ +E I+D+++ + Sbjct: 134 QKELNQVLKKMPIEKVMSYQLADGWTSV-NFARPAINLICMHGSE-----ILDIEILGLK 187 Query: 185 CGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPEC--RRNAILNDAHRLASAVG-- 240 NI GHRF + + +++ D Y DL E + PE R + I N L +G Sbjct: 188 ANNIIQGHRFESTEALSLKNADQY-EDLLEKKGNVIPEFDKRYDEIQNQISHLVKNLGNN 246 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 D +LLEE+ LVE MGSFD ++L +P E + L++K+NQK F ++ L Sbjct: 247 YSCPLDNELLEEVTTLVEKPNAMMGSFDSQFLDIPSECLILSMKSNQKYFPV-LKDNQLT 305 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FIL+SNI D + +++GN +V+ RL DA F+ +D+ Sbjct: 306 NKFILISNIYPKDP-SMVIKGNEKVIYPRLADAEFFFSQDK------------------- 345 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-----VDRAI 415 + L ++ LD ++V+H K+G+ ER + KI I + L D Sbjct: 346 -KRSLTAMVSDLD--NIVYHQKLGSLNERCLSVS----KIFNHIRENTTLNSNHDSDLLA 398 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL + +V EFPELQG +GK YA+ + + AIE+H KP+ + +P N S+ Sbjct: 399 KLAKADLSSLMVGEFPELQGIMGKYYALASDMDEDFAQAIEDHYKPKFSGDELPKNDTSL 458 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 +SLADK TLI+ ++I EKPSG KDP+ALRRA + IIRI++E I++ L + I Sbjct: 459 ILSLADKFTTLIDLFSIGEKPSGVKDPFALRRAAISIIRILIECDINLDLIELINKTFPG 518 Query: 530 ---EDQ-NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 ED+ LI F +DRL+ ++ DR +++++ + + I+ ++ +NEF Sbjct: 519 DHEEDKAQLIDFIYDRLENFIKDRGYETLVVQSVCDSQPRLINDIIFKVEAVNEFKKIDL 578 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E S KR+ IL +K + ++ +++ L ++EK LY I + + ++ K Sbjct: 579 SENLAQSNKRVLNIL---KKYDNPLTDKVNQDLLESDSEKLLYQSIVKVNENNKGYLEAK 635 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +Y+ + + L + EPI+ FF+ +VN DD++++ NR LL + + I+ N+ Sbjct: 636 KYNILLNNLIHLSEPIDNFFEDTMVNADDKDIKHNRHLLLSELNKAMNIIANL 688 >gi|188585834|ref|YP_001917379.1| glycyl-tRNA synthetase, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|229558564|sp|B2A1Y6|SYGB_NATTJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|179350521|gb|ACB84791.1| glycyl-tRNA synthetase, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 693 Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 200/721 (27%), Positives = 339/721 (47%), Gaps = 77/721 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L E+ +EE+PAR + L LL E + Y+N++ TP RL L + GL+ Sbjct: 5 LLFELGTEELPARFIPGLIKQLEENSANLLTEYRIEYENIKVMATPRRLTLLVNGLADKQ 64 Query: 64 PEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + GP G KA GF R + D +I++D K VY AV Sbjct: 65 QSSTTMKRGPAKEIAFDENGEPTKAAIGFARGQNIDP-KDLEIREDNGKEYVY-AVAEIV 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +DVL ++ I K P M W+ ++RP++ ++C+ ++++ Sbjct: 123 GENCQDVLPKLLDELITKFNLPVKMFWNNKQD-----KFLRPVRWLVCLF-----NDQVL 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L+ + NI+ GHRF + + + S ++Y + ++ V++D R I LA Sbjct: 173 PLNFGTVEASNISRGHRFLSQGDVIINSAENYEEVMRDSWVMVDHNVREETIKAQIEELA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF--VTRT 294 + DLLEE+ LVEW +G+F +++L +P+E + +++ +QK F V + Sbjct: 233 DQMNASPEMPHDLLEEVNFLVEWPTALLGNFAEEFLEIPKEALITSMQEHQKYFALVDKE 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L F+ V N D G V+ GN RV+ ARL DA F++ D +L S +E Sbjct: 293 DSSKLLPYFVAVRN--GDDHGIDKVKAGNERVLRARLSDARFFFEEDTKT--SLESKREQ 348 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK---IAQLIDADVAL 410 + +++ ++G+ ++V+R+ LGK I +L + +L Sbjct: 349 --------------------LKSIIYKEQLGSVDQKVTRMEELGKTLLDILELSEPVRSL 388 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RAI LSKADL T +V EFP LQG +G++YA + E+ C I EH PR + +P Sbjct: 389 TLRAIALSKADLPTNMVSEFPHLQGIMGEKYARIHGEDEKVCLGISEHYLPRHTGDKLPQ 448 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI------- 523 + S+ DK+D + + +AI E+PSGS+DPYALRR LGI+ IILE ++ Sbjct: 449 TMVGTITSIVDKVDNIASSFAIGERPSGSQDPYALRRQALGIVHIILETELAFSLEQLFH 508 Query: 524 -------------PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 P+S ++D ++ F R + +++ + D+I++ L + N+ Sbjct: 509 RALSLIPESALVAPISNILDD--ILDFVKLRSRTIFNEQGLPIDIIDSTLEVDKANVYKA 566 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 K L ++ S + E + R+ + N+ ++ + L E EK LY Sbjct: 567 YLRAKVLKDYRDSQELEDVRTAYTRVKNL------ANKAKGEDVYTELLQDETEKMLYHK 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + ++ L + I+ FFD+V+V VDD+ +++NRL+L+ +IK Sbjct: 621 YLNTEDKLLSDLEQDEISSAISELAGFKDYIDQFFDEVMVMVDDKHLQNNRLNLIYHIKE 680 Query: 691 I 691 + Sbjct: 681 M 681 >gi|332709830|ref|ZP_08429787.1| glycyl-tRNA synthetase beta chain [Lyngbya majuscula 3L] gi|332351428|gb|EGJ31011.1| glycyl-tRNA synthetase beta chain [Lyngbya majuscula 3L] Length = 729 Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 201/726 (27%), Positives = 329/726 (45%), Gaps = 80/726 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + L E + + + Y TP RL + +KGL Sbjct: 10 MSTFLLEVGTEELPADFVDSAIAQWQSRIPQTLDEYFLTPEGIEIYGTPRRLAVIIKGLP 69 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP + G KA GF R G++ D +D KG+ + Sbjct: 70 QKQPDREEEVKGPPAKAAFKDGQPTKAAIGFARKQGVEV--DNLFLRDTAKGEFVFVQKQ 127 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L ++P I + + MRW+ + RP++ ++ +L +D Sbjct: 128 ISGRPATEILTELIPQWIFGLEGRRFMRWANGD-----LKFPRPIRWLVTLL--DDVVLP 180 Query: 175 I-IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + +D + + I I+ GHR +P P+++ Y L A V ++PE RR I + Sbjct: 181 VELDNNAEIIKSDRISSGHRILSPKPVEIPQATDYQSYLRNAYVEVNPEARRETIKSQVE 240 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G +L EE+ LVEW +G F ++L LP+E++ + ++Q+ F Sbjct: 241 SAAKQLGGYTPLYPELWEEVTNLVEWPTAVVGKFSSEFLNLPQEVVTTEMVSHQRYFPVF 300 Query: 294 TREGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L FI + N + I GN RV+ ARL D F+K Sbjct: 301 KTEAATELIPYFITIGNGDPAKS-EIIATGNERVIRARLADGQFFYK------------- 346 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA--------QL 403 D+ PL+ + +L+ V F +G+ ++V RI + +I L Sbjct: 347 -------TDIDSPLESYLPQLE--KVTFQKDLGSVRQKVGRIEKIASQITDQLRQHSPNL 397 Query: 404 IDAD-VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 I + + + RA +L KADL T++V EFPELQG +G++YAV E+ AI EH PR Sbjct: 398 ISPEAITQIQRAALLCKADLVTQMVYEFPELQGVMGQKYAVTSGESEQVATAIFEHYLPR 457 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 G + +P V LAD+LDTL++ + + P+GS DP+ALRRA GII I + + Sbjct: 458 GAGDALPQTLTGQVVGLADRLDTLVSIFGLGMLPTGSSDPFALRRAANGIINITWDANLP 517 Query: 523 IPLSQFIED----------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILR---P 562 I L Q ++D ++L FF R++ L + + I +DL+ A+L P Sbjct: 518 INLQQLLQDIAADFVAAYPDKNSPIESLQEFFLQRIRTLLQEENKIDYDLVNAVLGEDDP 577 Query: 563 ENDN-----LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEIS 615 E N +L + D L + +K + R ++ + +E+ + ++ Sbjct: 578 EYQNRALIDVLDVRDRALFLQSIRDNGTLDKIYETVNRSARLAKQGDLDTKELQPTTVVT 637 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNV 672 P+Y E+ Y + + I+ S + + Y ++ + L I + FFD VLV Sbjct: 638 PEYFQKSCEQAFYDALVELVPKIKASQEERDYQKLVEALEQIAPTVSTFFDGDQSVLVMD 697 Query: 673 DDREVR 678 D +R Sbjct: 698 PDPNIR 703 >gi|294667522|ref|ZP_06732738.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602751|gb|EFF46186.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 720 Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 205/743 (27%), Positives = 339/743 (45%), Gaps = 106/743 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVLSGLEKRGVAITRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGKPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P D+L I+ AI +P PK MRW +++ RP++ ++ + +E Sbjct: 120 VHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGSE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + + YI L A VL+DP+ RR I+ Sbjct: 175 -----VIPAELLGVRGDRITRGHRFMHEGAVSLAAPGEYIDALRSAHVLVDPDARRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 ++ A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 DEVQAAATQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D L + Sbjct: 290 FPVLDDGGKLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFFFDEDLKQ--GLQA 346 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 + E + V + AK+G+ ++V+R+ L + IA + AD Sbjct: 347 MGEG--------------------LASVTYQAKLGSVADKVARVAALAEAIAPQVGADPV 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDESYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L +I Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKYWI 506 Query: 530 E---------------------------------------DQNLILFFH----DRLKLYL 546 +QN + FF+ DRL+ Y Sbjct: 507 VFSHILAARAYGELGLDGQVDKLKKELNESTAEQMVDRPIEQNELKFFYDFIVDRLRGYY 566 Query: 547 HDRDIRHDLIEAI--LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL-AIE 603 D+ + A+ LRP +L I + F + E + KRI IL +E Sbjct: 567 ADKGVPATHFNAVAELRPA--SLYDFDRRIDAIGIFAQLPEAEALAAANKRIRNILRKVE 624 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + +I + + + + + A I D G +++ Y + L + ++ Sbjct: 625 GEIPGDIDTTLLREPAEVALAEAVEAAIGDTG----DALHRHDYVAVLARLARLRPQVDA 680 Query: 664 FFDQVLVNVDDREVRDNRLSLLQ 686 FFD V+VN DD ++R NRL+LL+ Sbjct: 681 FFDGVMVNADDPQLRANRLALLK 703 >gi|300173190|ref|YP_003772356.1| glycyl-tRNA synthetase subunit beta [Leuconostoc gasicomitatum LMG 18811] gi|299887569|emb|CBL91537.1| glycyl-tRNA synthetase, beta subunit [Leuconostoc gasicomitatum LMG 18811] Length = 687 Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 212/737 (28%), Positives = 350/737 (47%), Gaps = 88/737 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + +++ Y TP RL + L +S Sbjct: 2 MSTFLLEIGLEEMPAHLVTSSEAQLIARTTEFLSEHRLSVGHIQPYSTPRRLAVELIDIS 61 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G+ + + G V+L Sbjct: 62 SESEALSEEKRGPSIERAKDDNGNWSKAAQGFARGQGM-----TPENFEERDGYVWL-TK 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P D+L +I I ++ + M+W+ +AF ++RP++ I+ +L E Sbjct: 116 HTPGVSAADILASIGEEVIAQMKFTTYMKWAN-----NAFLYVRPIRWIVALL-----DE 165 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K+ID ++ ++ G +T GHRF + I + + Y+ L+ A V++D R+ I + Sbjct: 166 KVIDFNILDVKTGRMTRGHRFLSNEHITIANAGVYVATLKAAYVIVDAATRKGIIQSQLE 225 Query: 234 RLASAVG--LELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+ L+L D ++LLEE+ +VEW F G F+ KYL LP+E++ +++ +Q+ Sbjct: 226 DIANQNNWLLDLSSDAAQNLLEEVNNIVEWPTAFSGGFENKYLELPDEVLMTSMREHQRF 285 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + L F+ V N S+ ++ GN +V+ ARLEDA F++ D+ Sbjct: 286 FYVTNQANDLLPHFLSVRNGN-SEHLDNVIAGNEKVLVARLEDAEFFYQEDK-------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDA 406 K +D M ++ L VFH KIGT E + R+ L +A Q + Sbjct: 337 ------------QKTIDDNMTKVKKL--VFHEKIGTVYEHMQRVGRLAASLADELQFDET 382 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A + RA + K DL T +V EF ELQG +G+ YA L E+ + AI EH P Sbjct: 383 QKADLARASEIYKFDLMTGMVGEFDELQGIMGEHYAQLFGESAAVASAIREHYMPVSANG 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-----I 521 N+ + +++ADKLDT++ F++ + PSGS DPY LRRA G++R L+NK + Sbjct: 443 NIAETAVGAVLAIADKLDTIVTFFSADLIPSGSNDPYGLRRAANGVVR-TLQNKHWHVAL 501 Query: 522 DIPLSQFIEDQN----------LILFFHDRLKLYLHDRDIRHDLIEA--ILRPENDNLLT 569 LS F++ ++ F DR++ D D+R D++ A L P+ D ++ Sbjct: 502 RSLLSDFVKSNGEVTENADLTAIMTFILDRVRKLALDGDVRPDIVAAGTALTPDVD-VVY 560 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 IVD + L + + R+ + LA+++ + + + E+ L+ Sbjct: 561 IVDRTQTLANHADDDNFRDIIEALTRVSR-LAMKQPAEGLVDESLFEN----QTEQALFI 615 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHS----ICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 ES Q GD ++S + +PI +FD +VN D+ V++NR L Sbjct: 616 ATQKINLAALES-------QGGDAVYSALAELQKPIADYFDMTMVNADNELVKNNRYLQL 668 Query: 686 QYIKNIILIVINVQKIV 702 I +I + ++++IV Sbjct: 669 HMIDKLISALGDLEQIV 685 >gi|25009294|sp|Q8KA07|SYGB_BUCAP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|21623027|gb|AAM67695.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 691 Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 216/730 (29%), Positives = 354/730 (48%), Gaps = 85/730 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P+ + K + L ++Y+N+ + TP RL L + L + Sbjct: 6 FLVEIGTEELPSNILKKIILVFYKNFVDELSFNKILYKNINYFSTPRRLALQIIELD--T 63 Query: 64 PEKIEERL--GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 EKI E++ GP + G KA + +S + ++K K G+ + ++ Sbjct: 64 SEKINEKIKKGPAIKHAFDENGNPTKAAYYWAKSCKINLNQAERLK--TKTGEWIIHRIQ 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K IE + I+ ++++ +MRW TT+ +IRP+++I+ +L EK Sbjct: 122 EKKEKIELLFPKIIEKILKQINLKNTMRWETTN-----LRFIRPIRNIVMLL-----DEK 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 II ++ +P N Y H I +++ Y L ++ ++ + E R+ I +A Sbjct: 172 IIKSEVFNVPSNNFLYHHISCKEEKIYIKNAIEYPAVLFKKNKIIANYETRKEKIKYEAK 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYL-CLPEELIRLTIKTNQKCF-- 290 ++A V + + LLEE+ LVE Q + F K Y+ +P++++ TI+ Q+CF Sbjct: 232 KIAKKVDGIIKTNPFLLEEVTSLVESPQALLARFKKDYINYIPKKILIHTIEKQQRCFSI 291 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLP 345 + + + FI +SNI+ S I+ GN +V+ ARL DA+ F K+D +N LP Sbjct: 292 YSNNSKKEILPYFIFISNIK-SKKNKEIILGNEKVMHARLSDAMFFLKQDRKRKLENYLP 350 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 L V F+ +GT E+ R+++L + I+ + Sbjct: 351 FLKK---------------------------VSFYNNLGTLYEKTLRLKLLIESISCYTN 383 Query: 406 A-DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + + R+ VLSK DL T++V EFPELQG IG YA+ EN AI+E P Sbjct: 384 TINKNDLIRSAVLSKCDLITQMVDEFPELQGTIGMYYALENKENKEVAIAIKEQYLPSFS 443 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P+ I +S++DK+DTL +AI E P+ KDP+ LRRA LGI+RII+ KI I Sbjct: 444 GDELPSTPIGCLLSISDKIDTLSGMFAIGETPTPEKDPFGLRRAALGILRIIITKKIPID 503 Query: 525 LSQFIE----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L + IE + +I FF RL + + +I+++L + L Sbjct: 504 LKKIIEISLKIYTFKKVNYSIISKKIIKFFISRLSFFYEKKGYSTKVIKSVLSCK---LT 560 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKRL 627 +D+ K +N K E +L AKRI I+ K N + IS EI + + EK L Sbjct: 561 EPLDIDKRINAISDLKKIESIILIAKRIDNIV----KNNHQIISSEIHVELMKKTEEKNL 616 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 I F + +E K+Y +I + + +PI+ FFD+V +N + E+R NRL LL Sbjct: 617 LKEIKIFNSKTKELFIQKKYKEILVEIKKLEKPIDNFFDKVQINHSNFEIRQNRLLLLIK 676 Query: 688 IKNIILIVIN 697 I+ L + N Sbjct: 677 IQKFFLKIAN 686 >gi|325290522|ref|YP_004266703.1| glycyl-tRNA synthetase beta chain [Syntrophobotulus glycolicus DSM 8271] gi|324965923|gb|ADY56702.1| glycyl-tRNA synthetase beta chain [Syntrophobotulus glycolicus DSM 8271] Length = 690 Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 208/717 (29%), Positives = 333/717 (46%), Gaps = 81/717 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI EE+PA+ L L E ++ + ++ Y TP RL L L GL+ Sbjct: 4 NFLLEIGMEEMPAKFAPGVLSQLENNARKKLDELRIVCKEIKGYGTPRRLALLLSGLADR 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G+ KA+ GF R G++ + D +++ VY K Sbjct: 64 QEDVCEEVKGPAQKAAYDSEGSPTKAVQGFARGQGVR-LEDLFVQEWNGVPYVYARKTLK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLK--SILCILVAEDAKE 173 + +I ++L I + +PK MRW + RP++ + LC + Sbjct: 123 GEEII-NILPQFCLDMITGLSFPKPMRWGDHE-----VRFARPIRWLAALC-------DK 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ + G ++ GHR + I + +Y+ DLE VL D E R+ I Sbjct: 170 EIVPFRYAGLQSGRLSRGHRTLG-NSIVLSQASNYLEDLENVFVLGDQEKRKRVIWEQVV 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA+AVG + ED+ LL EI LVE+ +G D Y+ +PEE+I +K +Q+ F R Sbjct: 229 SLAAAVGGYVEEDEGLLSEITHLVEYPTALIGEVDLNYMMMPEEVIITPMKEHQRYFPVR 288 Query: 294 TREGVLANCFILVSNIQASDGGA--AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++EG L FI V N D A + GN +V+ ARLEDA +++ D Sbjct: 289 SKEGKLLPYFITVRN---GDSTALDKVKDGNKKVLKARLEDAAFYYRED----------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 L PL+ + A+L+ V++H K+GT +RV RI L +A+ L + Sbjct: 335 ---------LKVPLEVQGAKLE--KVIYHDKLGTVAQRVERIVELSGIVAEKMALSTEEK 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV R L+KADL T +V +FPELQG +G YA E+ I+EH PR +++ Sbjct: 384 ELVKRTARLAKADLVTHMVYDFPELQGIMGAYYAKSNGESPEVVCGIKEHYLPRFTGDSL 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + VS+ADKLD ++ + +P+GS+DPYALRR LG++ ++ E++ ++ L Sbjct: 444 PVSYTGRAVSIADKLDAIVGAFGCGIQPTGSQDPYALRRQALGVVSMLKEDRHNLSLRDL 503 Query: 529 IE-------DQNLIL------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I+ Q L L FF RL+ + +R+D +EA++ + Sbjct: 504 IKASDEIFAGQGLALESFTKIQPLLEDFFAQRLRFIFQEEGLRYDTVEAVMAQGCAFPYS 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLY 628 + + L+ + E F + + + +K + E S++ LE +L+ Sbjct: 564 VEKKARVLSR---KREEEGFTSYVNAYVRCVNLSKKTDGGEWSIDDLADRFELELASQLF 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + +QE+ Y + I IE FD V++ V++ +R RL LL Sbjct: 621 ETVPQVAQAVQENDFELAYQKAA----KIVPHIEKLFDSVMIMVEEENLRRARLGLL 673 >gi|294624286|ref|ZP_06702992.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601416|gb|EFF45447.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 720 Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 207/742 (27%), Positives = 335/742 (45%), Gaps = 104/742 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A ++ L++ GV + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLARAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAQGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P D+L I+ AI +P PK MRW +++ RP++ ++ + +E Sbjct: 120 VHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGSE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + + YI L A VL+DP+ RR I+ Sbjct: 175 -----VIPAELLGVRGDRITRGHRFMHEGAVSLAAPGEYIDALRSAHVLVDPDARRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 ++ A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 DEVQAAATQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D L + Sbjct: 290 FPVLDDGGKLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFFFDEDLKQ--GLQA 346 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 + E + V + AK+G+ ++V+R+ L + IA + AD Sbjct: 347 MGEG--------------------LASVTYQAKLGSVADKVARVAALAEAIAPQVGADPV 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDESYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L +I Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKYWI 506 Query: 530 E---------------------------------------DQNLILFFH----DRLKLYL 546 +QN + FF+ DRL+ Y Sbjct: 507 VFSHILAARAYGELGLDGQVDKLKKELNESTAEQMVDRPIEQNELKFFYDFIVDRLRGYY 566 Query: 547 HDRDIRHDLIEAI--LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 D+ + A+ LRP +L I + F + E + KRI IL Sbjct: 567 ADKGVPATHFNAVAELRPA--SLYDFDRRIDAIGIFAQLPEAEALAAANKRIRNIL---R 621 Query: 605 KKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 K EI +I L AE+ L + +++ Y + L + ++ F Sbjct: 622 KVEGEIPGDIDTTLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAF 681 Query: 665 FDQVLVNVDDREVRDNRLSLLQ 686 FD V+VN DD ++R NRL+LL+ Sbjct: 682 FDGVMVNADDPQLRANRLALLK 703 >gi|330867892|gb|EGH02601.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 501 Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 174/533 (32%), Positives = 259/533 (48%), Gaps = 42/533 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K +L KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKP- 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 123 --TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELAT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F EG Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A IV GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPE+QG G YA E A+ E PRG +PT V Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 ++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 448 AIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVK 500 >gi|254414262|ref|ZP_05028029.1| glycyl-tRNA synthetase, beta subunit [Microcoleus chthonoplastes PCC 7420] gi|196178937|gb|EDX73934.1| glycyl-tRNA synthetase, beta subunit [Microcoleus chthonoplastes PCC 7420] Length = 722 Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 201/713 (28%), Positives = 327/713 (45%), Gaps = 87/713 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L L E + ++++ Y TP RL + ++GL Sbjct: 9 MPTFLLEVGTEELPANFVESAIKQWQSRLSQSLDEYLLTPESIQVYGTPRRLAILIQGLP 68 Query: 61 PHSPEKIEERLGPRVGA----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP V A GK KA +GF R G+ ++ D +I+ + KKG+ V + Sbjct: 69 RQQPDREEEVKGPPVKAAFKDGKPTKAAEGFARKQGV-SLDDLEIR-ETKKGEFVFVVKK 126 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L ++P I + + M W S RP++ ++ +L + Sbjct: 127 IIGRSAIEILPEVIPQWIFGLEGKRFMCWGDGDLRFS-----RPIRWLVALL-----DDT 176 Query: 175 IIDLDL----KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ ++L + I + GHR P + + + Y++ LE A V+++ + R+ I + Sbjct: 177 VLPIELVNGSETIKSDRTSRGHRILHPESVTIAKAEDYVKSLESAFVIVERDRRKQIIQD 236 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A + + ++L +E+ LVE+ +G FD +YL LP E+++ + +Q+ F Sbjct: 237 QVQSAAQKLKGHTLLYEELWDEVTDLVEYPTAIVGQFDAEYLILPPEVVKTVMVKHQRYF 296 Query: 291 VTRTREGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 E L FI +SN + I GN RV+ ARL D +F+K Sbjct: 297 PVFKDETATELLPHFITLSN-GDPEKSEIIAAGNERVIRARLADGEYFYK---------- 345 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 DL+ PL+ + +L+ V F ++G+ ++V RI +IA+ + Sbjct: 346 ----------TDLASPLESYLPKLET--VTFQDELGSMRQKVGRIEKTASRIAEQLAVSQ 393 Query: 409 ALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D RA L KADL T++V EFPELQG IG++YAV+ E+ + AI EH PRG Sbjct: 394 KQWDDIIRAAALCKADLVTQMVYEFPELQGVIGQKYAVVSGESEAVATAIFEHYLPRGAG 453 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P V LAD+LDTL++ + + P+GS DP+ALRRA ++ I E + I L Sbjct: 454 DKLPETLTGQVVGLADRLDTLVSIFGLGMIPTGSSDPFALRRAANAVVNITWEGNLGINL 513 Query: 526 SQFIED----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLL 568 Q ++D + L FF R++ L D + I +DL+ A+L END Sbjct: 514 DQLLQDVSADFVATYSEKSSPVEALQEFFIQRIRTLLQDEQKIDYDLVNAVLG-ENDREY 572 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--------------- 613 T + L + FL ++ ++ I E NR L Sbjct: 573 T----QRALKDVLDVRDRALFLQGIRKNGKLDEIYETVNRSARLSMQGDLDFQQLDPKAV 628 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + P +E Y + Q + + Y QI D L + + FFD Sbjct: 629 VRPDLFEKSSEPAFYDALVALVPRTQAAQQERNYQQIVDALAEVTPIVSTFFD 681 >gi|30410816|ref|NP_660484.2| glyS: glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 712 Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 216/730 (29%), Positives = 354/730 (48%), Gaps = 85/730 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P+ + K + L ++Y+N+ + TP RL L + L + Sbjct: 27 FLVEIGTEELPSNILKKIILVFYKNFVDELSFNKILYKNINYFSTPRRLALQIIELD--T 84 Query: 64 PEKIEERL--GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 EKI E++ GP + G KA + +S + ++K K G+ + ++ Sbjct: 85 SEKINEKIKKGPAIKHAFDENGNPTKAAYYWAKSCKINLNQAERLK--TKTGEWIIHRIQ 142 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K IE + I+ ++++ +MRW TT+ +IRP+++I+ +L EK Sbjct: 143 EKKEKIELLFPKIIEKILKQINLKNTMRWETTN-----LRFIRPIRNIVMLL-----DEK 192 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 II ++ +P N Y H I +++ Y L ++ ++ + E R+ I +A Sbjct: 193 IIKSEVFNVPSNNFLYHHISCKEEKIYIKNAIEYPAVLFKKNKIIANYETRKEKIKYEAK 252 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYL-CLPEELIRLTIKTNQKCF-- 290 ++A V + + LLEE+ LVE Q + F K Y+ +P++++ TI+ Q+CF Sbjct: 253 KIAKKVDGIIKTNPFLLEEVTSLVESPQALLARFKKDYINYIPKKILIHTIEKQQRCFSI 312 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNNLP 345 + + + FI +SNI+ S I+ GN +V+ ARL DA+ F K+D +N LP Sbjct: 313 YSNNSKKEILPYFIFISNIK-SKKNKEIILGNEKVMHARLSDAMFFLKQDRKRKLENYLP 371 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 L V F+ +GT E+ R+++L + I+ + Sbjct: 372 FLKK---------------------------VSFYNNLGTLYEKTLRLKLLIESISCYTN 404 Query: 406 A-DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + + R+ VLSK DL T++V EFPELQG IG YA+ EN AI+E P Sbjct: 405 TINKNDLIRSAVLSKCDLITQMVDEFPELQGTIGMYYALENKENKEVAIAIKEQYLPSFS 464 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P+ I +S++DK+DTL +AI E P+ KDP+ LRRA LGI+RII+ KI I Sbjct: 465 GDELPSTPIGCLLSISDKIDTLSGMFAIGETPTPEKDPFGLRRAALGILRIIITKKIPID 524 Query: 525 LSQFIE----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L + IE + +I FF RL + + +I+++L + L Sbjct: 525 LKKIIEISLKIYTFKKVNYSIISKKIIKFFISRLSFFYEKKGYSTKVIKSVLSCK---LT 581 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKRL 627 +D+ K +N K E +L AKRI I+ K N + IS EI + + EK L Sbjct: 582 EPLDIDKRINAISDLKKIESIILIAKRIDNIV----KNNHQIISSEIHVELMKKTEEKNL 637 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 I F + +E K+Y +I + + +PI+ FFD+V +N + E+R NRL LL Sbjct: 638 LKEIKIFNSKTKELFIQKKYKEILVEIKKLEKPIDNFFDKVQINHSNFEIRQNRLLLLIK 697 Query: 688 IKNIILIVIN 697 I+ L + N Sbjct: 698 IQKFFLKIAN 707 >gi|171317308|ref|ZP_02906504.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MEX-5] gi|171097507|gb|EDT42345.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MEX-5] Length = 699 Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 210/713 (29%), Positives = 342/713 (47%), Gaps = 63/713 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +PEK + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPEKQVREKVLP 81 Query: 74 RVGA----GKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 A GK + L +I+D + +D K + + + D L+ Sbjct: 82 VSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQD-GKAEAFFVNYSAAGATLADGLQ 140 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 141 AALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGIDA 193 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 G+ T GHRF + + +Q Y L ++ V+ RR I + AS G +V Sbjct: 194 GDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHAS--GDTVV 251 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F+ Sbjct: 252 MPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSRFL 311 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 +VSNI G I++GN RVV RL DA F+++D+ KP Sbjct: 312 IVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDKK--------------------KP 350 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL T Sbjct: 351 LADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADLLT 408 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E A EH +PR + +PT +S V+LADKL+ Sbjct: 409 DMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADKLE 468 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN----------- 533 T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 469 TIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGVAE 528 Query: 534 ----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 529 STDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTRLAEAEAL 588 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 589 AAANKRISNIL---KKSEGGANGAVQPALLVEAAEKALHEQLAAVTPHVQSQLEARAYTG 645 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 646 ALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|317051556|ref|YP_004112672.1| glycyl-tRNA synthetase subunit beta [Desulfurispirillum indicum S5] gi|316946640|gb|ADU66116.1| glycyl-tRNA synthetase, beta subunit [Desulfurispirillum indicum S5] Length = 693 Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 206/729 (28%), Positives = 331/729 (45%), Gaps = 71/729 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLE+ +EEIPA + E + + R TP RL L L+G++ Sbjct: 5 DILLELGTEEIPAGFIDDLLLQMERFSAKWFGERNISFATARTMGTPRRLTLILEGVAVS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +E LGP G +A +GFLRS G SD +K + KG+ YLAV+++ Sbjct: 65 GYATTQELLGPARNIAYDANGQLTRAGEGFLRSKGF-AASDAYVK-ETSKGE-YLAVMQR 121 Query: 116 PKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + VL I+ + KSM+W + F + RPL+ I + Sbjct: 122 QEAVQTMAVLPQFFEELIRSLSCRKSMQWGS-----GTFRFARPLRHIAAFF-----GTQ 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +D ++ + G TYGHRF I +Q Y LE V++D RR I Sbjct: 172 AVDFAMEGLRSGGTTYGHRFLGSREIALQGASSYQTQLEAQQVIVDISRRRAMIQEACDA 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A G ++ + L+ LVE+ +G FD+++L LP EL+ +T++ +QK F Sbjct: 232 VAKQHGGRVIGGESLVNLTSHLVEYPVAVVGDFDERFLRLPRELLIVTMREHQKYFALED 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI +SN+ D ++I +GN RV+ ARL DA ++ D Sbjct: 292 AGGRLLPHFITISNMPIDDT-SSIKRGNERVLRARLSDAEFYYDED-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 L PL R A+LD VVF ++G+ G++V RI + +AQ L ++ A + Sbjct: 337 ------LKTPLASRKAQLD--KVVFQEQLGSIGQKVERIAGIADALAQAAGLSESQRADI 388 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +LSK DL + +V EFPELQG +GKEYA + + + I EH PR + +P++ Sbjct: 389 ATLALLSKCDLVSGMVYEFPELQGVMGKEYAAQEGYSETVSRGIMEHWFPRHAGDTLPSS 448 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 + VS+ADK+DT+ + I PS S DPYALRR LGI+ + K+ + L I Sbjct: 449 MEAAMVSIADKMDTIAGCFGIGLLPSSSNDPYALRRQALGILHTLSHWKLSVSLDAVIHM 508 Query: 531 ----------------DQNLILFFHDRLKLYLHDRD-IRHDLIEAILRPENDNLLTIVDL 573 + + F R K++ + HD++E++ +++T+ Sbjct: 509 ALQRLAKVISRESRQVAEEIANFIIQRSKVFFTTTEGFDHDVVESVFSGRFSDVITVSRK 568 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L S + + +R I I E + ++ + E RL AV+ Sbjct: 569 LQALQSLKSRQDYRSVVETFRRAVNI--IPEGFSGSVNAALFQHASEGELLGRLDAVLP- 625 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + + + + ++ FD V+V D VR+NRL+LLQ + + Sbjct: 626 ---QALDCVKKNDFDGVFGIALQLKPHVDKLFDNVMVMDKDVTVRNNRLALLQQVGQLFS 682 Query: 694 IVINVQKIV 702 V + K+V Sbjct: 683 GVADFSKLV 691 >gi|109947592|ref|YP_664820.1| glycyl-tRNA synthetase subunit beta [Helicobacter acinonychis str. Sheeba] gi|109714813|emb|CAJ99821.1| glycyl-tRNA synthetase, beta chain [Helicobacter acinonychis str. Sheeba] Length = 705 Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 217/744 (29%), Positives = 356/744 (47%), Gaps = 84/744 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ----YWTPHRLFLYL 56 + + L+EI +EE+PA+ +++ L L ++ + QN Q ++TP RL +++ Sbjct: 3 LDELLVEILTEELPAQALLNEYKEMPKKLHALFQKHAIEMQNEVQNIEIFYTPRRLCVFV 62 Query: 57 KGLSPHSPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKG 106 K + E EE GP V G A+ GF + GL+ Q K Sbjct: 63 KDFPLLTKETKEEFFGPPVEIACNHKDKAQGLNALGLGFYQKLGLKDHQHFQTAFKNNKE 122 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 +Y A + PK+ ++++ IV ++ + + KSMRW + S+IRP+ +I + Sbjct: 123 VLYHAKIN-PKQPTKNLIMPIVLEFLESLNFGKSMRWGSVEK-----SFIRPIHNICVLF 176 Query: 167 VAEDAKE-KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRR 225 E+ KI K T HR I V S Y LE+ V+LDP+ R Sbjct: 177 NGENFNNIKIKGYGFK---TKQATKTHRQEGFDFIGVDSPKEYFEVLEKNHVILDPKKRE 233 Query: 226 NAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 IL + L + + D+DLL+EI+ + E+ V +G FDK +L LP E+I ++K Sbjct: 234 AKILQEIKELEKKHQIIVEVDRDLLDEIVAITEYPTVLLGEFDKAFLKLPSEIITTSMKE 293 Query: 286 NQKCFVTRTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 NQ+ F T +E L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 294 NQRYFATFNQESQEESQKLHNGFIVVSNAINKDK-QKIIAGNQKVLKARLSDAVFFYEND 352 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 L KPLD + VVF +GT +++ R V+ + + Sbjct: 353 --------------------LKKPLDNT----PLESVVFVQGLGTLKDKMERELVIAQYL 388 Query: 401 AQL--------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCC 452 Q ++ + L+ RAI ++KADL +E+V EF ELQG +G YA+ QNEN Sbjct: 389 TQKYAPSLNMPLEKALELIGRAIKIAKADLLSEVVYEFTELQGIMGYYYALKQNENELVA 448 Query: 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 +++E P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+ Sbjct: 449 LSLKEQYLPTSENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGL 508 Query: 513 IRII----LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRP 562 ++II L+ + + L E + F + L+ +L +R D +I ++L Sbjct: 509 LKIIVHYGLKFDLKMDLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNT 568 Query: 563 ENDNLLTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQY 618 +++ I+ +K L F +A+ ++ L SA F+ LA I + +N + E S Sbjct: 569 NERDIVAIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDQNPNQTSEFSTNL 625 Query: 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 E L+ + T ES+D K + S+ P+E +F VLV D E++ Sbjct: 626 FKEPQEHALFKAFNAITTSAFESLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDLEIQ 680 Query: 679 DNRLSLLQYIKNIILIVINVQKIV 702 NR + L + L + +V++I Sbjct: 681 KNRKNFLWNVYQSFLEIGDVKEIA 704 >gi|254995439|ref|ZP_05277629.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Mississippi] Length = 693 Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 195/739 (26%), Positives = 347/739 (46%), Gaps = 91/739 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D +LE+ E++P + A E + + + + + T HR+ L +S Sbjct: 3 SDLILEVLCEQLPTKTIKSAHEYILPRIDKEFSSRRISCDAPKVFTTSHRIILIACNVSQ 62 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 +S + +E GPR+ + K+ I GFLR G + + +I+ +K +VL + + Sbjct: 63 NSSDGKKEIKGPRISSDKEVISGFLRKVGKSGVEELEIQVSGEKFYYSSSVL--SSKDLT 120 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 + L ++ I+ P K MRW T W+RP+ ++LC+L K++ + + Sbjct: 121 NELTEVIQCMIENFPLHKRMRWGT-----GTGYWVRPVINVLCVLDG-----KVLPVSVA 170 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I N+T+G+ + V + Y+ L E MV++D E RR IL + S L Sbjct: 171 GITANNVTFGNLRFSNRKYTVTKAEEYLNFLSENMVIVDVEARRKHILEQLNEQISGTEL 230 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL-- 299 ++ +LE++ +E+ +V +GS DK + +P E++ + +Q+ + + G + Sbjct: 231 TYDQNAQILEDMSSNLEYPKVLIGSVDKNFSEIPTEVVSCVMTHHQRYLAIKDQNGKIVK 290 Query: 300 -ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A+ +V+N+ +++ + +V+ ARL DAL K+D KE + + Sbjct: 291 FASAASVVNNM--------VIKNHEKVLRARLSDALFLIKKD----------KEHNMDYY 332 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRAIVL 417 + L + VVF + +GT ++ RI L K + I L +RA ++ Sbjct: 333 VGL------------LSGVVFKSGLGTLLDKAERISALAKYCSVWIPRSSMLNTERAAMI 380 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SKADL T +VREFPELQGKIG+ YA E C AIEEH P G ++ P + I I V Sbjct: 381 SKADLATLVVREFPELQGKIGRYYAKHSGEEEEVCVAIEEHYLPIGQKDHCPKSPIGIAV 440 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 S+ADK+D+L+ A E SGS+DP+ALRR ++ ++R+++EN + IPL + Sbjct: 441 SIADKVDSLVGLMA-TENISGSRDPFALRRTSISLLRVMIENSVSIPLDLMVSKAVSMYM 499 Query: 532 ---------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ++ F +DRLK+ L + D+ ++++AI+ +D + + Sbjct: 500 CKARLNKNEGRFLRVDRDALISTILSFCYDRLKVILKESDLDKEVVDAIVGTLHD-IPIV 558 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-------KKNREISLEISPQYLLLEA 623 ++ + F + KG+ + + +R I++ E K N+ + E + Sbjct: 559 KKKVEVICSFLKTEKGKSVITAYRRANNIISKESFDWKLDGKSNKRLCKE--------DC 610 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRL 682 E +LY I + + + ++ + + L + IF D V V + + E+ NR Sbjct: 611 EIQLYNQIQHYKKLLGSLIKEDKFLEAMESLFEFSSFVNIFMDGVRVCDKMNTELYRNRT 670 Query: 683 SLLQYIKNIILIVINVQKI 701 LL +I V++ KI Sbjct: 671 RLLVSSVSIYNTVLDFSKI 689 >gi|297584640|ref|YP_003700420.1| glycyl-tRNA synthetase subunit beta [Bacillus selenitireducens MLS10] gi|297143097|gb|ADH99854.1| glycyl-tRNA synthetase, beta subunit [Bacillus selenitireducens MLS10] Length = 698 Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 193/722 (26%), Positives = 342/722 (47%), Gaps = 78/722 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PAR + A +L+ L ++ + Y ++ + TP RL + + G+S P++ +E GP Sbjct: 16 PARFVNGAMNELAKRTEAFLSDKQIDYDDVNMFATPRRLAVKVNGVSTKQPDQEKEAKGP 75 Query: 74 -------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF + G Q + K+ K + A L + +L Sbjct: 76 AKKIALDEEGNWTKAAIGFAK--GQQVNEEDLFFKEVKGVEYVYAKLYIEGQETLQLLSG 133 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + V I +P+PK+MRW + + RP++ ++ + E++I L++ + Sbjct: 134 LHDV-ITGIPFPKNMRWGSHE-----MRYARPVRWLVAMY-----GEEVIPLEIAGVMAS 182 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAM----VLLDPECRRNAILNDAHRLASAVGLE 242 N+T GHRF + +L+H D E A+ V+ DP R++AI N +AS + Sbjct: 183 NVTQGHRFLG----QAATLNH-ASDYEHALLSQHVVADPFSRKDAIKNQIQDIASEQEWQ 237 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + D+ LLEE+ LVE+ GSFD+++L +P+ ++ +++ +Q+ F + + G L Sbjct: 238 IPMDEGLLEEVTQLVEYPTALFGSFDERFLAVPDRVLITSMREHQRYFPVQDQSGSLLPY 297 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F+ V N + +GN +V+ ARL+DA F+ D K+ AL+ N + Sbjct: 298 FVTVRNGDHRHL-ETVQKGNEKVLRARLQDAEFFFNED----------KKHALEDNFE-- 344 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSK 419 + +V+H +GT ++V R++ L +KI ++ D A ++RA LSK Sbjct: 345 ----------KLHQIVYHEDLGTIADKVDRVQTLAEKIGSMLSLDSASKTAINRAARLSK 394 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T++V EF EL+G +G+ YA+ E AI EH P+ + VP+ +S+ Sbjct: 395 NDLVTQMVNEFTELEGYMGEVYALKSGETPEVATAIREHYLPKQSGDPVPSGIEGAVISV 454 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--- 536 ADKLDT+ +++ P+GS+DP+ LRR T I++I + + + L++ IL Sbjct: 455 ADKLDTIAAHFSLGNIPTGSQDPHGLRRQTAAIVQIFRDFEWTLSLNELFNAAQDILQEK 514 Query: 537 ----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F R K L + IR+D+++A+L E DN+ + LN+ Sbjct: 515 NLQKRNQAEVLRDFNQFVTLRYKNILQESGIRYDVVDAVLAFETDNVPLVFKKAAFLNDK 574 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 A ++ + + R+ I + ++ EI ++ L E LY I + Sbjct: 575 LGDASFKEDVEAFSRVTNIASKKQGSAEEIDQDLFESDL----EVNLYQDYERIKPVIIK 630 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 S+ + L I +FD ++V DD ++R+NRL+ + + ++ ++ + Q Sbjct: 631 SLRDMKPEAAYQALREAAPSIHKYFDGIMVMTDDEQIRENRLTQMSQLAALVRMIADFQS 690 Query: 701 IV 702 IV Sbjct: 691 IV 692 >gi|237739148|ref|ZP_04569629.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 2_1_31] gi|229423748|gb|EEO38795.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 2_1_31] Length = 687 Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 208/733 (28%), Positives = 357/733 (48%), Gaps = 86/733 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI EEIPAR +A DL LK + Y+ ++ Y TP RL L + ++ Sbjct: 4 LFEIGMEEIPARFLSQALTDLKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVAEMQE 63 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK- 117 + E +GP + G KA +GFL + + S +I K+ K G+ Y+A R K Sbjct: 64 DLNELNIGPSKERAYKDGELSKAGEGFLNAYKIDE-SQIEIVKNDK-GE-YIAFKRFAKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I+ + + +PKSM+WS + RP++ L + +++ Sbjct: 121 EATEKLLPEILKELVLEETFPKSMKWSD-----KTIRFARPIEWFLALY-----GNNVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI---LNDAHR 234 +++ I N + GHRF +V S++ Y++ + E V++D RR I +N A Sbjct: 171 FEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINKALL 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F Sbjct: 230 EDEKADI----DEGLLDEVTNLVEHPYAIVGNFSEDFLEVPQEVLIISMKVHQRYFPILD 285 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI++ N D + +GN +V++ARL DA F++ D Sbjct: 286 KKGKLLPKFIVIRN--GIDFSQNVKEGNEKVLSARLADARFFYQED-------------- 329 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR-----VLGKKIAQLIDADVA 409 L PLDQ + +L VVF +GT +V R ++GK + AD+ Sbjct: 330 ------LKIPLDQNVEKLKT--VVFQKDLGTMFNKVKRTEKIAEFLIGKLKYNYMKADIL 381 Query: 410 LVDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 R + L+KADL + ++ +EF +LQG +G +YA+ + E I I+EH PR + Sbjct: 382 ---RTVKLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEIGVAIGIKEHYYPRFQGDL 438 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--------LEN 519 +P+ I L+D++DTL+ + + P+GSKDP+ALRR LGI+ II L+ Sbjct: 439 LPSGIEGIITGLSDRIDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANINISLKE 498 Query: 520 KIDIPLSQFIEDQ-----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 +++ L DQ +++ F R+ D R D++ A+L + DN+ Sbjct: 499 LVNVSLDALQADQVLKADRAKVEADVLDFLKQRMINVFTDMKYRKDIVLAVLDRDADNIT 558 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 ++++K ++E + K E L AKR+ I+ K N ++ + + E EK LY Sbjct: 559 NALEIVKVISEKLALNKLEALLQVAKRVTNIIT---KGNNNVT--VKEKLFKEEIEKTLY 613 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A G ++S+ Y + + S+ I+ +F+ V+V +D+ +R+NR++ L YI Sbjct: 614 AEAKRIGEEAEKSIKENEYADYFEKMISLVPTIDKYFEAVIVMDEDKNIRENRINQLTYI 673 Query: 689 KNIILIVINVQKI 701 KN+ + + KI Sbjct: 674 KNLFDRIAYLNKI 686 >gi|299783170|gb|ADJ41168.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus fermentum CECT 5716] Length = 600 Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 183/597 (30%), Positives = 296/597 (49%), Gaps = 77/597 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL+ Sbjct: 5 YLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G T+ D + K+ KG Y+ V + Sbjct: 65 PDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQG-ATVDDIEFKE--VKGVEYVYVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++VL + V I + +P MRW + ++IRP+ ++ +L +++ Sbjct: 122 QGKPVDEVLAGLNDV-ITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL-----DDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + D+ + G +T GHRF H ++++S Y+ L++ V++D R+ I + + Sbjct: 171 VPFDILNVTAGRLTRGHRFLG-HDVEIKSATDYVAALKDDFVIVDAAERKATIKDQIQAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F R Sbjct: 230 VDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFCVRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N G A +++GN RV+ RLEDA F+ DQ Sbjct: 290 DGKLQPAFISVRN-----GNAVHLDNVIKGNERVLVPRLEDAKFFFDEDQK--------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +DQ + RL +V FH +I + ++++R + L + Q L D ++ Sbjct: 336 -----------MTIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P + Sbjct: 383 ADLARAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 443 PQTTVGAVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDF 502 Query: 529 -------IEDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPEND 565 +E L FF DRLK +RHD+++A R D Sbjct: 503 QASAKQAVEQATPALGLDYAKNADAVTDFFIDRLKQLFSLDHLRHDIVDAGHRHPRD 559 >gi|163783650|ref|ZP_02178638.1| phosphoenolpyruvate synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159881055|gb|EDP74571.1| phosphoenolpyruvate synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 666 Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 214/724 (29%), Positives = 357/724 (49%), Gaps = 84/724 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI +EE+P+ + E L G L E + +++ Y TP RL Y+K Sbjct: 1 MSDLLIEIGTEELPSSV----IEPTLAFLKGRLSE-VLGREDIETYGTPRRLAFYVKEFV 55 Query: 61 PHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGD-VYLAV 112 ++ E GP G ++++GFL+ G + D K KG+ V L V Sbjct: 56 DERVKREETVFGPPWHVAFDEEGKPTRSLEGFLKRYGARP-GDV-FKGSKGKGEYVALKV 113 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +E LK + VP PK MRW+++ ++ RP++ IL + Sbjct: 114 VHEEKSRLE-ALKESFEDMLLSVPLPKRMRWTSSKR----ITFSRPVRWILAL-----HG 163 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++DL E+ T GHRF + I++ + Y+ +E+A V+ E RR +++ Sbjct: 164 DRVVDLRFGELQSDRRTKGHRFLSGDWIELSKAEDYLSVMEKASVIPSIEERRGLVVDAV 223 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A + + L++E+ LVE+ V +GSF++K+L LPE L+ +T+ + + F Sbjct: 224 EEEARKLSAVPRYPEGLVDEVTNLVEYPFVVVGSFEEKFLELPE-LVIITVSAHHQRFFC 282 Query: 293 RTREGVLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +R+G L N FI VSN + +D I +G +V+ ARLEDAL F++ D Sbjct: 283 LSRDGKLINKFIGVSNNLPKTD---LIRRGYEKVLRARLEDALFFYRED----------- 328 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 L + L++ + +L V+ H KIGT ++V R++ + +++ + D Sbjct: 329 ---------LKRRLEELVPKLS--GVLIHPKIGTVLDKVERLKSISQRLCDELSCDEETR 377 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V+RA+ LSKADL TE+V+E ELQG +G YA+ Q E AI E KP+G ++ Sbjct: 378 RKVERAVYLSKADLLTEMVKELDELQGYMGYIYALKQGEEEDVAKAIYEQYKPKGLEDDT 437 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +SL+DK+D L++F++ E P GS DP+ LRRA+ G+ RI+ E DI +S+ Sbjct: 438 PETLVGAVLSLSDKIDDLVSFFSAGEIPKGSSDPFGLRRASFGVFRILEERNWDIDISRL 497 Query: 529 IE-------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEF 580 E + L F RL+ YL +DL+ A+L+ E+ ++ +K L+ Sbjct: 498 FELYDRVDNVEELEKFLAQRLESYLERYG--YDLVRAVLKVESPFRPYRVIKKVKELSAV 555 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI--SPQYLLLEAEKRLYAVISDFGTHI 638 + +R+ +IL +E +N E+ E+ PQ + L E R Sbjct: 556 RNDKAFTDIYEGYRRVVKILP-KEWENSEVKEELLREPQEINLWREVR------------ 602 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ + + L + + I+ FD VL+ D EV+ NRLSLL +K + + Sbjct: 603 --ELESREFPL--SELAKLRKAIDDLFDNVLIMDKDEEVKRNRLSLLNRVKKLFNRYADF 658 Query: 699 QKIV 702 ++V Sbjct: 659 SEVV 662 >gi|152990481|ref|YP_001356203.1| glycyl-tRNA synthetase subunit beta [Nitratiruptor sp. SB155-2] gi|151422342|dbj|BAF69846.1| glycyl-tRNA synthetase, beta subunit [Nitratiruptor sp. SB155-2] Length = 678 Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 213/726 (29%), Positives = 349/726 (48%), Gaps = 86/726 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA K ++ +L+ G++ + ++TP RL L+ + Sbjct: 8 LIEIGVEELPAIPFLKELPNIEKKWEKILEANGLLCE-FEFFYTPRRLVLWHRNFKTKQD 66 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 +E G + G A GF + G+ ++ + K +Y K Sbjct: 67 TTYQEYFGAPLHIAFKDGQPTPAATGFAKKCGV-SVEELSTTKRGSTEILYYKKEISGKP 125 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 +E +L +V ++ + + KSMRW S+IRP++ + L E+ I Sbjct: 126 SVE-ILPEMVYEWLKSLDFGKSMRWGNLKE-----SFIRPIRWGIINL-----GERFIKA 174 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 +L I N TY HR P++V + Y L+ VLL PE R I + + Sbjct: 175 ELFGITTANYTYLHRSVTTEPVQVANAKEYFEVLKNGGVLLYPEARYEKIDVEFAGIEKE 234 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 G+ + +D++LL E++ + E+ GSF++K+L LP E+I ++K +Q+ F +EG Sbjct: 235 -GIVIEKDEELLAEVVAITEFPTALKGSFEEKFLQLPPEVIVTSMKEHQRYFPVY-KEGK 292 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F+ VSN +D + IV+GN RV+ ARL DAL FW+ D LK Sbjct: 293 LQNGFVFVSN-AYTDDFSLIVKGNERVLKARLSDALFFWEND--------------LKKG 337 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---------- 408 LD + +VVF +GT ++ +R L KIA + D Sbjct: 338 LDFE----------GLENVVFMDGLGTLFDK--EVREL--KIANHLLEDYRALFSESGVT 383 Query: 409 -ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A+++RAI+LS ADL TE+V EF ELQG +G YA+ Q E+ + AI+E P G + Sbjct: 384 KAMLERAIMLSYADLLTEMVYEFTELQGIMGYYYALAQGEDEAVALAIKEQYLPSGEESD 443 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P+ S V+L+ KLDTL+ +++ + P+GSKDP+ LRRA G+IRI+L +D +S+ Sbjct: 444 LPSTLFSALVALSKKLDTLMALFSVGKIPTGSKDPFGLRRAANGVIRIVLAYNLDFDISK 503 Query: 528 FIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ L FF +R+ + D+ +I+A++ +L+ I IK L Sbjct: 504 IFDEIRGEYKDFDTNKLENFFIERINQFY---DVNPSVIKAVIESGERDLVQIDKKIKAL 560 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA--EKRLYAVISDFG 635 S+ + + KR+ I+ K+ ++S E L E+ EKRL+ ++ Sbjct: 561 ATIVESSDFKDIFTTFKRVANIV-----KDVDVSKETPVDENLFESEYEKRLWDRFNEVY 615 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 T ++ Y D L + I++FFD VLVN +D +R NR +L+ I + Sbjct: 616 TK-----EYPDYESRLDALFGLKHDIDLFFDNVLVNAEDERLRQNRKNLIASIYKAFKEI 670 Query: 696 INVQKI 701 ++++I Sbjct: 671 ADIKEI 676 >gi|222475634|ref|YP_002564051.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Florida] gi|255003627|ref|ZP_05278591.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Puerto Rico] gi|255004754|ref|ZP_05279555.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Virginia] gi|222419772|gb|ACM49795.1| glycyl-tRNA synthetase beta chain (glyS) [Anaplasma marginale str. Florida] Length = 694 Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 195/739 (26%), Positives = 345/739 (46%), Gaps = 90/739 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D +LE+ E++P + A E + + + + + T HR+ L +S Sbjct: 3 SDLILEVLCEQLPTKTIKSAHEYILPRIDKEFSSRRISCDAPKVFATSHRIILIACNVSQ 62 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 +S + +E GPR+ + K+ I GFLR G + + +I++ + Y + + K L Sbjct: 63 NSSDGKKEIKGPRISSDKEVISGFLRKVGKSGVEELEIREVSGEKFYYSSSVLSSKDLTN 122 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 + L ++ I+ P K MRW T W+RP+ ++LC+L K++ + + Sbjct: 123 E-LTEVIQCMIENFPLHKRMRWGT-----GTGYWVRPVINVLCVLDG-----KVLPVSVA 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I N T+G+ + V Y+ L E MV++D E RR IL + S L Sbjct: 172 GITANNRTFGNLRFSNRKYTVTKAAEYLNFLSENMVIVDVEARRKHILEQLNEQISGTEL 231 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL-- 299 ++ +LE++ +E+ +V +GS DK + +P E++ + +Q+ + + G + Sbjct: 232 TYDQNAQILEDMSSNLEYPKVLIGSVDKNFSEIPTEVVSCVMTNHQRYLAIKDQSGKIVK 291 Query: 300 -ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A+ +V+N+ +++ + +V+ ARL DAL K+D KE + + Sbjct: 292 FASAASVVNNM--------VIKNHEKVLRARLSDALFLIKKD----------KEHNMDYY 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRAIVL 417 + L + VVF + +GT ++ RI L K + I L +RA ++ Sbjct: 334 VGL------------LSGVVFKSGLGTLLDKAERISALAKYCSVWIPRSSMLNTERAAMI 381 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SKADL T +VREFPELQGKIG+ YA E C AIEEH P G ++ P + I I V Sbjct: 382 SKADLATLVVREFPELQGKIGRYYAKHSGEEEEVCVAIEEHYLPIGQKDHCPKSPIGIAV 441 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 S+ADK+D+L+ A E SGS+DP+ALRR ++ ++R+++EN + IPL + Sbjct: 442 SIADKVDSLVGLMA-TENISGSRDPFALRRTSISLLRVMIENSVSIPLDLMVSKAVSMYM 500 Query: 532 ---------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ++ F +DRLK+ L + D+ ++++AI+ +D + + Sbjct: 501 CKARLNKNEGRFLRVDRDALISTILSFCYDRLKVILKESDLDKEVVDAIVGTLHD-IPIV 559 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-------KKNREISLEISPQYLLLEA 623 ++ + F + KG+ + + +R I++ E K N+ + E + Sbjct: 560 KKKVEVICSFLKTEKGKSVITAYRRANNIISKESFDWKLDGKSNKRLCKE--------DC 611 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRL 682 E +LY I + + + ++ + + L + IF D V V + + E+ NR Sbjct: 612 EIQLYNQIQHYKKLLGSLIKEDKFLEAMESLFEFSSFVNIFMDGVRVCDKMNTELYRNRT 671 Query: 683 SLLQYIKNIILIVINVQKI 701 LL +I V++ KI Sbjct: 672 RLLVSSVSIYNTVLDFSKI 690 >gi|300868195|ref|ZP_07112827.1| Glycyl-tRNA synthetase beta subunit [Oscillatoria sp. PCC 6506] gi|300333819|emb|CBN58011.1| Glycyl-tRNA synthetase beta subunit [Oscillatoria sp. PCC 6506] Length = 739 Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 213/750 (28%), Positives = 336/750 (44%), Gaps = 109/750 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA +A ++ + E+ + + + Y TP RL + ++GL Sbjct: 1 MATFLLEVGTEELPATFVKEAIAQWQRLIPAAIAEQSLTNEAINVYGTPRRLAVVIEGLP 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP + G KA +GF + G++ I +I+ KGD + + Sbjct: 61 TQQSDREEEIKGPPAATAFKDGKPTKAAEGFAKKQGVE-IDSLEIRPT-DKGDFIFILKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R D+L ++P I K+ + MRW + RP++ ++ +L +DA Sbjct: 119 IPGRPTADILAELIPQWISKLEGKRLMRWGDGE-----LKFPRPIRWLVALL--DDAILP 171 Query: 175 IIDLDLKE-IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 I ++ E + I+ GHR P P+ + ++Y+ L A + +DPE R+ I Sbjct: 172 ITLVNGSETVNSDRISQGHRVLHPQPVAISKAENYLESLRSAYIEVDPEKRQTKIREQVE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A G + +LLEE+ LVEW +G FD+++L LP E I I NQ+ F Sbjct: 232 AAAKKQGGKADITTELLEEVTNLVEWPTAVVGKFDEEFLILPPEAITTIIVKNQRYFPIL 291 Query: 294 TREGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L FI +SN + I GN RVV ARL D F+K Sbjct: 292 KSEASSELLPYFITISNGDPAKSDV-IATGNGRVVRARLADGDFFYK------------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADV 408 DL+KPL+ + +L+ V F +GT ++++R + IA Q+ + + Sbjct: 338 -------ADLAKPLESYLPQLE--KVTFQENLGTVRDKINRFSKIANLIADQLQVTEEER 388 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA +L KADL T++V EFPELQG +G++YA+ E AI EH PRG + + Sbjct: 389 NNIQRAALLCKADLVTQMVYEFPELQGIMGQKYALASGEAEPVATAIFEHYLPRGAGDIL 448 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------------ 516 P + V+LADKLDTL++ +++ KP+GS DP+ALRR+ +I I Sbjct: 449 PQSLTGQVVALADKLDTLVSIFSLGMKPTGSSDPFALRRSANAVINITWAAQLPLDLYEL 508 Query: 517 ---------LEN-----KIDIPLSQFIE---------------DQNLILFFHDRLKLYLH 547 LE+ K+ P SQ E Q+L FF R++ L Sbjct: 509 IVKVVEFTQLESLTKTGKLAPPDSQSDEYHSFMQRIRTLYVCLKQDLSDFFLQRIRTLLQ 568 Query: 548 -DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 ++ I +DL+ A+L END T + L + + + FL + + I E Sbjct: 569 EEKGIDYDLVNAVLG-ENDPEYT----ERALQDLLDALERAVFLQQIRDNGTLDKIYETV 623 Query: 607 NREISLE---------------ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 NR L + P+ +E+ I Q S + + Y Q+ Sbjct: 624 NRSTRLAGQGDLDKMQLEPKTLVRPELFQKSSEQAFNDAIVQLVPKTQASKESRNYQQLV 683 Query: 652 DLLHSICEPIEIFFD---QVLVNVDDREVR 678 + L I + FFD VLV + E++ Sbjct: 684 ESLAEIAPAVSNFFDGSESVLVMDSNPEIK 713 >gi|310778466|ref|YP_003966799.1| glycyl-tRNA synthetase beta chain [Ilyobacter polytropus DSM 2926] gi|309747789|gb|ADO82451.1| glycyl-tRNA synthetase beta chain [Ilyobacter polytropus DSM 2926] Length = 690 Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 206/728 (28%), Positives = 356/728 (48%), Gaps = 93/728 (12%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EEIPAR A D+ + + + + ++ ++ + TP RL L + G+S Sbjct: 4 LLEIGMEEIPARFLKPALNDIEKYIKKEFESQRIKFETLKTFGTPRRLVLLVDGVSEKQE 63 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR--- 114 + GP G +A GF +S G+ +D +I + PK G+ Y+AV + Sbjct: 64 DLDIVNTGPAKEVAYDVNGELTRAGVGFAKSQGIDP-TDLEILETPK-GE-YIAVRKFVE 120 Query: 115 --KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K L+ +LK + I + +PKSM+WS + + RP++ L + A Sbjct: 121 GKDTKELLSGLLKNL----ITGLTFPKSMKWSDL-----SMKFARPVQWFLAM-----AD 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++++ +++ I + GHRF +V S++ Y L E V++D E R+ I++ Sbjct: 167 DELVEFEIEGIKSSLNSKGHRFFGEE-FEVTSIEEYFTKLRENNVIVDIEERKQMIIDMI 225 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + G +++ + DLL+E+ L+E+ +G+F+ ++L +P+E++ ++++ +Q+ F Sbjct: 226 KEKCTKTGEQVLIEPDLLDEVTNLIEYPYPIVGTFNSEFLEVPQEVLIISMQVHQRYFPI 285 Query: 293 RTREGVLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F+++ N I +S+ + +GN +V++ARL DA F++ DQ Sbjct: 286 LDSQGKLLPKFVVIRNGITSSE---HVRKGNEKVLSARLSDARFFYQEDQK--------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 K L++ + +L VVF +GT +++SR KK+A+ + +AL Sbjct: 334 -----------KSLEEFVDKLST--VVFQKDLGTIAQKISR----SKKLAEYMSEKLALR 376 Query: 412 D------RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 D R I L+KADL + ++ +EF +LQG +G +YA+ E IEEH PR Sbjct: 377 DSKEDIMRTIHLAKADLVSNMIGEKEFTKLQGFMGADYALKAGEKEVVSKGIEEHYYPRY 436 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P + + D++DTL+ + I PSGSKDP+ALRRA L I+ IIL +K+ I Sbjct: 437 QGDKLPQGIEGVIAGICDRMDTLVGCFGIGMIPSGSKDPFALRRAALAIVNIILNSKLVI 496 Query: 524 PLSQF-------IEDQN------------LILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 L + +E+ N L+ FF R D R D+I A+L + Sbjct: 497 SLEELTSKMLDILEEDNVLKRPKKDVLKDLMEFFKQRAINVFADHGHRKDVIGAVLSIDC 556 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 D LL + I+ L + +L KR+ I +K IS L+ +AE Sbjct: 557 DVLLEASEKIETLEKVSKEEGFNDLVLLLKRVGNISKDHHEK------AISTDLLVEDAE 610 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K L+ D + + ++ K Y + + + I FFD V+V D+ +++NRLSL Sbjct: 611 KELHKFYVDLDSKTELNLQTKSYEEFFRNILAGKNVINRFFDSVMVMDKDQSLKNNRLSL 670 Query: 685 LQYIKNII 692 L+ + I Sbjct: 671 LKSLNEIF 678 >gi|17231603|ref|NP_488151.1| glycyl-tRNA synthetase subunit beta [Nostoc sp. PCC 7120] gi|25009306|sp|Q8YPT0|SYGB_ANASP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|17133246|dbj|BAB75810.1| glycyl-tRNA synthetase beta chain [Nostoc sp. PCC 7120] Length = 716 Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 211/749 (28%), Positives = 342/749 (45%), Gaps = 83/749 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L + +++ Y TP RL + + GL Sbjct: 1 MPGFLLEVGTEELPASFLGGAIAQWRSRIPQSLAANSLTSESVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A K A GF + G++ + +++ KG+ + Sbjct: 61 SQQPDREEEIKGPPAQAAFKDGQPTPAAVGFAKKQGVE-LEALEVRPT-DKGEFVFIQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + D+L +VP I + + MRW S RP++ ++ +L E Sbjct: 119 TPGRPVADILTELVPQWIYSLEGKRLMRWGDGDVRFS-----RPIRWLVALL-----DEA 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+ L+L + I+YGHR P PI +Q Y+ L + V ++ + R I Sbjct: 169 ILPLELVNGSLTVKSDRISYGHRVLHPAPITIQKAGDYVNTLRDGYVTVNAKERTTTIKE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +G DLLEE+ LVEW +G F++++L LP E+ + ++Q+ F Sbjct: 229 QVAATVQKLGGYTEIYPDLLEEVTNLVEWPSPVVGKFEEEFLNLPTEVTTTVMVSHQRYF 288 Query: 291 -VTRTRE-GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 V +T + L FI VSN + I GN RV+ ARL D F+K Sbjct: 289 PVFKTGDHKELLPYFITVSNGDPTKS-EVIAVGNERVIRARLADGQFFYK---------- 337 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLID 405 DLSK L+ + +L+ V F +G+ +V RI + +I+ QL + Sbjct: 338 ----------TDLSKSLESYLPQLET--VTFQEDLGSLRGKVERIVKVAAQISSQLQLGE 385 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D RA +L KADL T++V EFPELQG +G++YAV E+ AI EH PRG Sbjct: 386 GDRQNNQRAALLCKADLVTQMVFEFPELQGIMGQKYAVASGESPEVSTAIVEHYLPRGAD 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P V LAD+LDTL++ + + P+GS DP+ALRRA ++ I + I L Sbjct: 446 DILPQTLTGQVVGLADRLDTLVSIFGLGLIPTGSSDPFALRRAANAVVNITWAANLQINL 505 Query: 526 ------------SQFIEDQNLIL-----FFHDRLKLYLH-DRDIRHDLIEAILRPEND-- 565 +Q+ +DQ ++ FF R++ L ++ I +DL+ A+L END Sbjct: 506 ASLLAQTVAEFAAQYNKDQAPLITALNEFFLQRIRTLLQEEKQIDYDLVNAVLG-ENDPE 564 Query: 566 -------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISP 616 +LL + D +L + +K + R ++ A + +++ + + P Sbjct: 565 YTERALQDLLDVRDRALYLQQIRRDGTLDKIYETVNRSTRLAAQGDLDTQQLDPTSVVRP 624 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVD 673 + +E Y + Q + + + Y + L I + FF D VLV Sbjct: 625 ELFQKPSESDFYDALVKLVPQTQAAQESRNYQLLVAGLVEIAPTVSNFFDGADSVLVIDP 684 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKIV 702 D E++ NRL++L ++N ++ + IV Sbjct: 685 DPEIKRNRLNILGLLRNHARVLADFGAIV 713 >gi|254423532|ref|ZP_05037250.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7335] gi|196191021|gb|EDX85985.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7335] Length = 715 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 207/734 (28%), Positives = 331/734 (45%), Gaps = 101/734 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA +A + L ++ + + Y TP RL + + L Sbjct: 1 MATFLLEVGTEELPASFVSEAIAQWKSKIPTDLSQQFIESGQIEFYATPRRLAVLIHELP 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P + EE GP + G KA GF S G+ ++ +++ + KG+ Sbjct: 61 ERQPTREEEAKGPPAKAAYKGGKPTKAATGFAASKGV-SVDQLEVR-NTDKGEFVFVRQT 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R ++L+ +VP + + + MRW + RP++S++ +L D + Sbjct: 119 IPGRQTAELLQAMVPEWVLGLEGSRFMRWGDGD-----LRFPRPIRSLVTLL---DTQLI 170 Query: 175 IIDLDLKEIPCGN--ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + L+ C + T GHR P + + + Y+ L+ A V +DP R+ IL+ Sbjct: 171 PVSLENGSEVCQSDRTTTGHRVLHPEKVSLDNAQDYVSALKSAYVTVDPLERKTIILDQV 230 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +AS+V V ++DLL E++ LVEW +G FD+++L LP ++ ++++Q+ F Sbjct: 231 AEVASSVDGHAVINEDLLAEVVDLVEWPTAIIGKFDEEFLALPSKVTITEMESHQRYFPV 290 Query: 293 R--TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 R T L FI VSN + A I QGN RV+ ARL D F+ DQ Sbjct: 291 RPSTDTDQLLPYFITVSNGDPAKS-ALITQGNERVIRARLADGKFFFDADQK-------- 341 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 +P + +L+ V F A++G+ E+VSRI +K+ L+ + L Sbjct: 342 ------------QPFADYLPQLET--VTFEAQLGSVREKVSRI----EKVTSLLSDQLGL 383 Query: 411 VD-------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 RA L KADL T++V EFPELQG IG++YA E + DAI EH PRG Sbjct: 384 SPKQKQQAIRAAQLCKADLVTQMVGEFPELQGYIGQKYAANSGEPAAVADAIYEHYLPRG 443 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +++P I V +AD+LDTL++ ++I + P GS DP+ALRRA +I I+ + D+ Sbjct: 444 AGDSLPQTLIGQVVGIADRLDTLVSIFSIGKLPKGSSDPFALRRAANAVITIVWD--ADL 501 Query: 524 P------LSQFIEDQN--------------LILFFHDRLKLYLHDR-DIRHDLIEAILRP 562 P L+Q +ED LI FF R++ L D +I +DL+ AI Sbjct: 502 PLKLYPVLTQVVEDFAASREGVDPDALMALLIDFFDQRIRTLLQDNLEIDYDLVNAIFGQ 561 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--------- 613 + L + L + FL S + ++ + E NR L Sbjct: 562 DKHYQL------RSLTDLLDVRDRATFLQSIRNDARLAVLYETVNRAAKLAVKGELDTDI 615 Query: 614 ------ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD- 666 + P +E+ Y + Q + + Y ++ L + FFD Sbjct: 616 LDPEGIVDPTLFEQPSEQAFYDSLQTLLPQTQAAQAERDYSKLITGLEQAAPTVANFFDG 675 Query: 667 --QVLVNVDDREVR 678 V+V ++ VR Sbjct: 676 DTSVMVMAEETAVR 689 >gi|170699169|ref|ZP_02890222.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria IOP40-10] gi|170135894|gb|EDT04169.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria IOP40-10] Length = 699 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 209/713 (29%), Positives = 342/713 (47%), Gaps = 63/713 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +PEK + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPEKQVREKVLP 81 Query: 74 RVGA----GKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 A GK + L +I+D + +D K + + + D L+ Sbjct: 82 VSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQD-GKAEAFFVNYSAAGATLADGLQ 140 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 141 AALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGIDA 193 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 G+ T GHRF + + +Q Y L ++ V+ RR I + A+ G +V Sbjct: 194 GDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHAN--GDTVV 251 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F+ Sbjct: 252 MPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSRFL 311 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 +VSNI G I++GN RVV RL DA F+++D+ KP Sbjct: 312 IVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDKK--------------------KP 350 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL T Sbjct: 351 LADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADLLT 408 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E A EH +PR + +PT +S V+LADKL+ Sbjct: 409 DMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADKLE 468 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN----------- 533 T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 469 TIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGVAE 528 Query: 534 ----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 529 STDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEAEAL 588 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 589 AAANKRISNIL---KKSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAYTG 645 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 646 ALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|294783854|ref|ZP_06749176.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 1_1_41FAA] gi|294479666|gb|EFG27445.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 1_1_41FAA] Length = 687 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 209/733 (28%), Positives = 356/733 (48%), Gaps = 86/733 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI EEIPAR +A DL LK + Y+ ++ Y TP RL L + ++ Sbjct: 4 LFEIGMEEIPARFLSQALTDLKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVADMQE 63 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK- 117 + E +GP + G KA +GFL + + S +I K+ K G+ Y+A R K Sbjct: 64 DLDELNIGPSKDRAYKDGELSKAGEGFLNAYKIDE-SQIEIVKNDK-GE-YIAFKRFAKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I+ + + +PKSM+WS + RP++ L + +++ Sbjct: 121 EATEKLLPEILKELVLEETFPKSMKWSD-----KTLRFARPIEWFLALY-----GNNVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI---LNDAHR 234 +++ I N + GHRF +V S++ Y + E V++D RR I +N A Sbjct: 171 FEIEGIKSSNKSKGHRFFGKE-FEVISVEDYFNKIRENNVIIDISERRKMIEEMINKALL 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F Sbjct: 230 EDEKADI----DEGLLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILD 285 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI++ N D + +GN +V++ARL DA F++ D Sbjct: 286 KKGKLLPKFIVIRN--GIDFSQNVKEGNEKVLSARLADARFFYQED-------------- 329 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR-----VLGKKIAQLIDADVA 409 L PLDQ + +L VVF +GT +V R ++GK + AD+ Sbjct: 330 ------LKIPLDQNVEKLKT--VVFQKDLGTMFSKVKRTEKIAEFLIGKLKYNYMKADIL 381 Query: 410 LVDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 R + L+KADL + ++ +EF +LQG +G +YA+ + E I I+EH PR + Sbjct: 382 ---RTVKLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEIGVAIGIKEHYYPRFQGDL 438 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P+ I L+D+ DTL+ + + P+GSKDP+ALRR LGI+ II+ I+I L + Sbjct: 439 LPSGIEGIITGLSDRTDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANINISLKE 498 Query: 528 FIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 ++ + +++ F R+ D D R D++ A+L + DN+ Sbjct: 499 LVKVSLDALEADKVLKVDRAKVEADVLEFLKQRMINVFTDMDYRKDIVLAVLDRDADNIT 558 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 ++++K ++E + K E L AKR+ I+ K N ++ + + E EK LY Sbjct: 559 NALEIVKVISEKLALNKLEDLLQVAKRVTNIIT---KGNNNVT--VKEKLFKEEIEKTLY 613 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A G ++S+ Y + + S+ I+ +F+ V+V +D+ VR+NR++ L YI Sbjct: 614 AETKKVGEEAEKSVKENEYADYFEKMVSLAPTIDKYFETVIVMDEDKNVRENRINQLTYI 673 Query: 689 KNIILIVINVQKI 701 KN+ + + KI Sbjct: 674 KNLFDRIAYLNKI 686 >gi|313884232|ref|ZP_07817998.1| glycine--tRNA ligase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312620679|gb|EFR32102.1| glycine--tRNA ligase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 685 Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 197/728 (27%), Positives = 343/728 (47%), Gaps = 77/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 ++LLEI EEIPAR ++ L + L + + + +++Y TP RL + + GL+ Sbjct: 4 NYLLEIGMEEIPARYLLSLSQQLKERMANFLNDNRLEFDAIQEYATPRRLAVLVTGLADK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+ GP + G KA GF G T D +D D + Sbjct: 64 QADLSEQAKGPALKIAKDDQGQWTKAAQGFAHGQGGTT--DDLFVQDLNGEDYVFINKFQ 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 DVL + V + + +P +M W ++IRP+ ++ +L +++ Sbjct: 122 AGESSRDVLNGVESV-VSGMTFPVTMHWHDYQ-----INYIRPVHWLVSLL-----DQEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I D + N + GHRF H + + D Y LE+ VL D R+ I + Sbjct: 171 IPFDFAGVTASNGSRGHRFLG-HDLVIAQADQYEASLEKEFVLADFHKRQAVIEAQIKEI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++ D+DLLEE+ +VEW F G F++KYL +P+ ++ +K +Q+ F + Sbjct: 230 ADQNHWQVPIDQDLLEEVTAIVEWPTAFYGDFEEKYLEIPDMVLITAMKDHQRYFYALDQ 289 Query: 296 EG-VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V N A+ +V+GN +V+ ARLEDAL F+K D Sbjct: 290 AGEKLQAIFISVRNGDANHL-ENVVRGNQKVLKARLEDALFFYKED-------------- 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR----VLGKKIAQLIDADVAL 410 L ++ +A+LD ++ H K+G+ ++ +R+ +L K+ Q+ D+ Sbjct: 335 ------LKGSIETYVAKLDHVNE--HYKLGSLADKQARVGKILDLLAVKVNQIDKNDLET 386 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A + K DL T +V EF ELQG++G YA ++ AI P +P Sbjct: 387 AKMAAKMYKFDLMTGMVGEFDELQGQMGAWYARQFGQSDQVAQAIASQYLPTTAGGQLPI 446 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 K +++ADKLD+L+ ++A++ P+GS DPYALRR +G++ I+ + + L + Sbjct: 447 TKAGALLAMADKLDSLVQYFAVDLIPTGSNDPYALRRQAMGVVEIMADQAWSLDLVDLFQ 506 Query: 531 D-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 D NL F R++ L ++ D+IEA+L + N++ I++ L Sbjct: 507 DILAHFNLSDSELLNNLKEFMAARMEQQLAKLNLNFDIIEAVLAGDFLNVVHILEAGPVL 566 Query: 578 NEFFSS--AKGEKFLLSAKRIFQI-LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 F + + S R+ + L ++E K+ +++L S E+E+ L+ + D Sbjct: 567 QAFKNQEPQAYRNLVESLSRVLNLGLTVKEAKDLDLNLAQS------ESEQVLFDAVKDL 620 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + +SM ++ D ++ PI FF+ +VN D +++DNR +L+ Y+ ++ Sbjct: 621 -NYEADSM-----AELLDEFKALVTPIGDFFENNMVNADQADIKDNRYALMAYLSRYVMQ 674 Query: 695 VINVQKIV 702 ++N QK++ Sbjct: 675 MMNPQKLI 682 >gi|186684136|ref|YP_001867332.1| glycyl-tRNA synthetase subunit beta [Nostoc punctiforme PCC 73102] gi|186466588|gb|ACC82389.1| glycyl-tRNA synthetase, beta subunit [Nostoc punctiforme PCC 73102] Length = 717 Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 212/750 (28%), Positives = 344/750 (45%), Gaps = 84/750 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L+ + ++++ Y TP RL + +KGL Sbjct: 1 MPAFLLEVGTEELPASFLSDALIQWRERIPQSLEANSLQGESVQVYGTPRRLAVLIKGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP A K A GF + G++ D + KG+ R Sbjct: 61 SQQADREEEIKGPPAQAAFKDGQPTAAALGFAKKQGVEL--DALFLRPTDKGEFVFVQKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L +V I + + MRW S RP++ ++ +L E Sbjct: 119 IPGRPVAEILTELVQEWIWGLEGKRLMRWGDGDGRFS-----RPIRWLVALL-----DET 168 Query: 175 IIDLDL----KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L K I I+ GHR P P+ + Y+ L+ A V +DPE R N I Sbjct: 169 VLPLELVNGSKTIQSDRISQGHRVLHPEPVTIAQATDYVTALKSAYVTVDPEERENLIKE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK-- 288 +A ++ V DLL E+ LVE+ +G F+ ++L LP E+I + T+Q+ Sbjct: 229 QVKAVAESLSGYTVIYPDLLAEVTNLVEYPSTVVGKFEPEFLELPTEVITEVMVTHQRYF 288 Query: 289 -CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F + E L FI +SN V GN RV+ ARL D F++ Sbjct: 289 PVFKPGSSEQELLPNFITISNGDPKKSDIVAV-GNERVIRARLADGRFFYE--------- 338 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLI 404 DL+KP+D + +L+ V F ++G+ ++ R+ + ++I+ +L Sbjct: 339 -----------ADLTKPIDSFLPQLE--KVTFQEELGSVRTKIDRVVKIAEQISTQLKLA 385 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + + RA +L KADL T++V EFPELQG +G++YA+ E+ AI +H P G Sbjct: 386 ENQSQKIQRAALLCKADLVTQMVYEFPELQGIMGEKYALASGEDAEVAKAIYQHYLPTGA 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----LENK 520 +N+P V LAD+LDTL++ + + PSGS DP+ALRRA +++I L Sbjct: 446 GDNLPETLTGQIVGLADRLDTLVSIFGLGLIPSGSSDPFALRRAANAVVKITWFYNLPIN 505 Query: 521 IDIPLSQFIED-------------QNLILFFHDRLKLYLH-DRDIRHDLIEAILRPEND- 565 +D L+Q D L FF R++ L ++ I +DL+ A+L END Sbjct: 506 LDDLLAQIATDFAAKYQKDRASLTTALQEFFLQRIRTLLQEEKQIDYDLVNAVLG-ENDP 564 Query: 566 --------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNREISLEIS 615 +LL + D +L + S + + + R ++ A + K E + + Sbjct: 565 EYTERTLKDLLDVRDRALYLQQIRSDSILDNIYETVNRSTRLAAQGDLDTKQLEPTSVVR 624 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNV 672 P+ +E+ LY + + Q + + Y + L I + FF D VLV Sbjct: 625 PELFQKPSEEALYNALIESVPQTQTAQQTRNYQLLVAALAKIAPTVSNFFDGPDSVLVMD 684 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D E++ NRL LL ++N ++ + IV Sbjct: 685 SDPEIKRNRLHLLGLVRNHARVLADFGAIV 714 >gi|78777189|ref|YP_393504.1| glycyl-tRNA synthetase subunit beta [Sulfurimonas denitrificans DSM 1251] gi|78497729|gb|ABB44269.1| Glycine--tRNA ligase [Sulfurimonas denitrificans DSM 1251] Length = 673 Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 194/717 (27%), Positives = 345/717 (48%), Gaps = 69/717 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA + +++ +L++ ++ N Y+TP RL L+ + Sbjct: 6 LIEIGVEELPAVPLLRELKNIEKKYADILEKHSLL-GNFEFYYTPRRLVLWHREFKSMQD 64 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 E +EE G + G A GF + G+ KD K+ Y L + Sbjct: 65 ESVEEFFGAPLSVAYKDGVATPAALGFAKKCGVGIDEITTTIKDNKEVIYYKRALMAKES 124 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 +L TI+ I + + KSMRW + S+IRP++ + L E ++D+ Sbjct: 125 --SHLLPTIIKEWIDSLEFGKSMRWGSLQE-----SFIRPIRWVNVQLADE-----LVDM 172 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 ++ + T+ HR I++ Y LE+ V L R I+ D + Sbjct: 173 EIFGVKSAKKTFVHRISNFEAIEINGAKEYFEVLEDGGVTLFATQREKKIVEDFASIEKE 232 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 G+++ DK+LL+E++ + E +GSFD+++L LP E+I ++K +Q+ F ++G Sbjct: 233 NGVKIEIDKELLDEVVAITENPTAILGSFDEEFLKLPPEVIITSMKEHQRYFPV-FKDGK 291 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN +D + +++GN RV+ RL DAL F+ D Sbjct: 292 LINRFVVVSNAFTNDF-SKVIEGNERVLRPRLSDALFFYNND------------------ 332 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVALVDRAI 415 L + ++ + VVF +G+ +++ R R + + + + + +DR+I Sbjct: 333 ------LKKGLSTAGLEKVVFMKGLGSVADKIERERKIAHALFDIYKPLHVTLEELDRSI 386 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E+V EF ELQG +G YA L E+ + AI E P G +P+NK+S Sbjct: 387 TLAKADLMSEMVYEFTELQGLMGSYYASLLGESQNVATAIREQYLPDGEDSALPSNKMSA 446 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 V+++ KLDTL+ ++IN+ P+GS+DP+ALRRA G+IR+ E+ ++ + + + Sbjct: 447 IVAMSLKLDTLLGLFSINQIPTGSRDPFALRRAVNGLIRVTKEHDLEFDIVKTLTLLSKN 506 Query: 530 ----EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + L FF +R++ Y + ++EA+L LL I I L +S Sbjct: 507 YDSFDISKLEAFFLERVRQYFK---VNPSIVEAVLISGERELLRISKKISALESMVNSQG 563 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 ++ + KR+ I + N + I+ + AE L+ ++ ++ + Sbjct: 564 FSEYFSTFKRVANITKDIDMSNIKA---INEKLFENSAEDALFKRYNEVC-----AISYN 615 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + D L S+ ++ FF+ V+VN +D +R+NR +L+ I IL + ++++I Sbjct: 616 SYEEELDALFSLKRELDSFFNDVMVNAEDESIRENRKALIASIYKSILKIADIKEIA 672 >gi|220904189|ref|YP_002479501.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868488|gb|ACL48823.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 694 Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 207/718 (28%), Positives = 337/718 (46%), Gaps = 65/718 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI SEE+P+R +L L E G+ Y ++R TP R + ++ L+ Sbjct: 1 MATFVLEIGSEELPSRFLAPEEAELFTRFTTALDEAGLEYGSLRVMSTPRRAVVMVENLN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E+ E GP V G KA++GF+R+ G + D +++ +KG Y+AV Sbjct: 61 PVQIEREEVISGPPVRVAYDAEGKPTKALEGFVRTNGC-ALEDV-FQQETEKG-AYVAVR 117 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ ++L + P I +P+ K MRW HS ++ RPL+ IL +L Sbjct: 118 KRTGGAPASELLAVMCPAIISALPFAKRMRWGN-HS----LAYARPLRWILALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILND 231 ++II ++ + G T GHR H P V L ++ + LD RR I+ Sbjct: 168 DEIISFEVGPMVSGRETCGHRIHGAGPFSVARAAELPAILADSCGITLDSPKRREIIVEG 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +R A VG +++ LL+E+ GL E + FD YL +P E++ +++++QK F Sbjct: 228 GNRQAQTVGGKVLWKDSLLDEVQGLAEHPVPLLADFDPAYLEVPREVLLTSMESHQKSFG 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F+ V NI D + + +G RV+ ARLEDA FW+ Sbjct: 288 IEGADGRLLPHFLTVLNITPEDM-SIVKRGWERVLRARLEDARFFWQ------------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 DL + D + +LD V+F +G+ G++ R+ L + +A+ D+A Sbjct: 334 -------ADLREGFDHWLQKLD--SVIFIGGLGSMGDKTRRLESLCRWLAEKCAPDLAAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL + +V EF LQG +G YA + E+ + A+ E P GP +P Sbjct: 385 AARAGRLSKADLVSGLVGEFDTLQGVMGGIYAARKGESAAVAQAVAEQYLPAGPDSPLPG 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-FI 529 + +SLADK DTL + + P+G+ DP LRR LGIIRI+L+ + + + + F Sbjct: 445 SMCGALLSLADKADTLAGCFGLGMIPTGAADPNGLRRCALGIIRIVLDFGLRLDMREVFA 504 Query: 530 EDQ-----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 Q L+ FF RL+ Y + L++A L + + Sbjct: 505 RAQELYGDRQWKLPPAEALDKLMEFFGARLRNYFMSQGQDTLLVDAALGAGAAQVKDCGE 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L +F A + + KR+ IL ++ + +I + + L +AEK L A + Sbjct: 565 RLEALVDFSREAGFAEAAQTFKRVANILR-KQGQAEDIPAQWQAELLHEDAEKALAATLD 623 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + + L ++ ++ FFD V+V DD +R NRL++LQ + Sbjct: 624 GLLPELDRMWAAREHTAALACLSNVRPAVDAFFDGVMVMCDDAALRRNRLAMLQALGG 681 >gi|56417270|ref|YP_154344.1| glycyl-tRNA synthetase beta chain [Anaplasma marginale str. St. Maries] gi|56388502|gb|AAV87089.1| glycyl-tRNA synthetase beta chain [Anaplasma marginale str. St. Maries] Length = 694 Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 196/739 (26%), Positives = 344/739 (46%), Gaps = 90/739 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D +LE+ E++P + A E + + + + + T HR+ L +S Sbjct: 3 SDLILEVLCEQLPTKTIKSAHEYILPRIDKEFSSRRISCDVPKVFTTSHRIILIACNVSQ 62 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 +S + +E GPR+ + K+ I GFLR G + + +I++ + Y + + K L Sbjct: 63 NSSDGKKEIKGPRISSDKEVISGFLRKVGKSGVEELEIREVSGEKFYYSSSVLSSKDLT- 121 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 D L ++ I+ P K MRW T W+RP+ ++LC+L K++ + + Sbjct: 122 DELTEVIQCMIENFPLHKRMRWGT-----GTGYWVRPVINVLCVLDG-----KVLPVSVA 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I N T+G+ + V Y+ L E MV++D E RR IL S L Sbjct: 172 GITANNRTFGNLRFSNRKYTVTKAAEYLNFLSENMVIVDVEARRKHILEQLSEQISGTEL 231 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL-- 299 ++ +LE++ +E+ +V +GS DK + +P E++ + +Q+ + + G + Sbjct: 232 TYDQNAQILEDMSSNLEYPKVLIGSVDKNFSEIPTEVVSCVMTNHQRYLAIKDQSGKIVK 291 Query: 300 -ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A+ +V+N+ +++ + +V+ ARL DAL K+D KE + + Sbjct: 292 FASAASVVNNM--------VIKNHEKVLRARLSDALFLIKKD----------KEHNMDYY 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRAIVL 417 + L + VVF + +GT ++ RI L K + I L +RA ++ Sbjct: 334 VGL------------LSGVVFKSGLGTLLDKAERISALAKYCSVWIPRSSMLNTERAAMI 381 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SKADL T +VREFPELQGKIG+ YA E C AIEEH P G ++ P + I I V Sbjct: 382 SKADLATLVVREFPELQGKIGRYYAKHSGEEEEVCVAIEEHYLPIGQKDHCPKSPIGIAV 441 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 S+ADK+D+L+ A E SGS+DP+ALRR ++ ++R+++EN + IPL + Sbjct: 442 SIADKVDSLVGLMA-TENISGSRDPFALRRTSISLLRVMIENSVSIPLDLMVSKAVSMYM 500 Query: 532 ---------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 ++ F +DRLK+ L + D+ ++++AI+ +D + + Sbjct: 501 CKARLNKNEGRFLRVDRDALISTILSFCYDRLKVILKESDLDKEVVDAIVGTLHD-IPIV 559 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-------KKNREISLEISPQYLLLEA 623 ++ + F + KG+ + + +R I++ E K N+ + E + Sbjct: 560 KKKVEVICSFLKTEKGKSVITAYRRANNIISKESFDWKLDGKSNKRLCKE--------DC 611 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV-NVDDREVRDNRL 682 E +LY I + + + ++ + + L + IF D V V + + E+ NR Sbjct: 612 EIQLYNQIQHYKKLLGSLIKEDKFLEAMESLFEFSSFVNIFMDGVRVCDKMNTELYRNRT 671 Query: 683 SLLQYIKNIILIVINVQKI 701 LL +I V++ KI Sbjct: 672 RLLVSSVSIYNTVLDFSKI 690 >gi|21233508|ref|NP_639425.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770473|ref|YP_245235.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. 8004] gi|25009328|sp|Q8P3I5|SYGB_XANCP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81303580|sp|Q4UP08|SYGB_XANC8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|21115360|gb|AAM43307.1| glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575805|gb|AAY51215.1| glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris str. 8004] Length = 698 Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 206/733 (28%), Positives = 337/733 (45%), Gaps = 78/733 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVLAGLEKRGVAVTRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G +A+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGKPTRALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P +L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 120 VHRAVTPGAQAAALLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF--- 171 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + +I +L + IT GHRF I + + YI L A VL+D + RR I+ Sbjct: 172 --GDTVIPAELLGVRGDRITRGHRFMHDGDIALAAPGDYIDALRAAHVLVDADARRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 EEVDAAARQAGGSARISDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NI + D A + +G RV+ R DA F Sbjct: 290 FPVLDDGGKLTEQFIGIANIVSKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 336 -------FDEDLKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADPV 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + I Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLPKLI 506 Query: 530 E--------------DQN-------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + D+N L F DRLK Y D+ + A+ + +L Sbjct: 507 DVGLASLPDAVKPHADRNTETVRADLYDFILDRLKGYYADKGVAATHFNAVAELKPASLY 566 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I + F + + E + KRI IL K EI +I L AE+ L Sbjct: 567 DFDRRIDAIGIFATLPEAEALAAANKRIRNIL---RKVEGEIPGDIDTTLLREPAEEALA 623 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + Sbjct: 624 EAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKL 683 Query: 689 KNIILIVINVQKI 701 + + V ++ + Sbjct: 684 GDRLGSVAAIEHL 696 >gi|114778507|ref|ZP_01453351.1| Glycyl-tRNA synthetase, beta subunit:DALR anticodon binding protein [Mariprofundus ferrooxydans PV-1] gi|114551232|gb|EAU53791.1| Glycyl-tRNA synthetase, beta subunit:DALR anticodon binding protein [Mariprofundus ferrooxydans PV-1] Length = 597 Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 180/564 (31%), Positives = 278/564 (49%), Gaps = 51/564 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L+EI +EEIPA + + L L LL + V ++R +P RL L+ Sbjct: 3 MKPLLIEIGTEEIPAGVAPRMGTALFDALHKLLADADVALASLRLGVSPRRLLLHAADCP 62 Query: 61 PHSPEKIEERLGP--RVG-AGKKAID---GFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ E GP RV A KA GF + +GL K KG AV Sbjct: 63 VMQADREETIWGPPERVAFADDKATGAALGFAKKSGLSLDDFTLADKGDGKGLYMKAVRT 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R + +++ +P ++K+P PK M+W S AF IRP++ I+ L ++ Sbjct: 123 QQGRPVAEIIAEAMPGILRKLPSPKQMQWQDGPSRSDAF--IRPVRWIVARL-----GDE 175 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +ID I G I+ GHR H ++ D + LE V D + R+ I+ Sbjct: 176 VIDFTFAGIQSGKISRGHRVHGSSG-EIDVNDPFAW-LEGQFVRADRDARKALIVTQLAT 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ G+ELV D LL+E+ LVEW Q +D+ +L LP E+ R+ +K +Q+CF Sbjct: 234 AAATAGVELVGDDALLDEVTDLVEWPQAIAARYDESFLRLPAEVSRIELKHHQRCFSACN 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G ++ F V+NI+ S AA+ QGN RVV ARL DA ++ RD Sbjct: 294 ADGSVSPVFFAVANIE-SKNPAAVAQGNERVVNARLADAAFYFDRDPQ------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR--VLGKKIAQLIDADVALVD 412 + LD R+ +L ++VF +G G++V RIR VL A +DAD A Sbjct: 341 --------QSLDARVEKLS--EIVFQDGLGMVGDQVRRIRTFVLDNAKALGVDADAA--Q 388 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L K+DL T +V EFPELQG +G YA + E+ + IE H P G + +P ++ Sbjct: 389 RAAYLCKSDLTTGLVGEFPELQGYMGGIYARMDGESDAVAAGIESHYAPTGAEDALPEDR 448 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK--IDIPLSQFIE 530 I+ + + ++ D L+ ++ + P+ S DPY LRRA +G+IR++ + ID+ L++ I+ Sbjct: 449 IARAIGIGERADKLLGYFHLGRIPTASADPYGLRRAAIGLIRLLSDTAMPIDMTLAKVID 508 Query: 531 D-------QNLILFFHDRLKLYLH 547 + Q + + D K +H Sbjct: 509 EAAKQWNQQRVTIAIADDTKAQVH 532 >gi|312898538|ref|ZP_07757928.1| glycyl-tRNA synthetase, beta subunit [Megasphaera micronuciformis F0359] gi|310620457|gb|EFQ04027.1| glycyl-tRNA synthetase, beta subunit [Megasphaera micronuciformis F0359] Length = 682 Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 201/725 (27%), Positives = 340/725 (46%), Gaps = 73/725 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA A + L + + + Y+++R TP RL L + GL+ Sbjct: 4 DLLLEIGTEEIPAHYMPSALKQLHEGAADIFAKNHLDYKDIRTVGTPRRLALLVTGLAEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + GP V G +A GF R + +S+ + DV +A + Sbjct: 64 QADVSSKNKGPSVKIAFDADGNPTQAAMGFARGQHID-VSELVTEDGYVYADVTVAG-SE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K L+ +++K +V + +PKSM W ++RPL+ + + E + Sbjct: 122 TKALLPEIMKRLV----SSLAFPKSMTWGN-----EDMRFVRPLRWFVALFGTE-----V 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ + G T GHRF +Q+ Y+ L E +++DPE RR+ I+N H + Sbjct: 168 VPFEMAHVVSGRTTRGHRFLGTGDFDIQAPGEYVDLLREHYIIVDPEERRDMIVNGLHAV 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G +V D++LLEE++ LVE+ G FD YL LPE + +K +Q+ F R Sbjct: 228 AKKQGGHVVMDEELLEEVVYLVEYPTPLYGCFDTDYLELPEAAVITPMKDHQRYFPLRDS 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 E L N F+ V N D V+ GN RV+ ARL+DA F+ D+ Sbjct: 288 EDRLMNMFLTVRN--GDDYHLDTVRHGNERVLRARLDDAKFFFAEDRK------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVD 412 K L R D+ +VF +GT ++ R+ + + +D V + Sbjct: 334 --------KSLADRTE--DLKRIVFQDGLGTLFDKSQRLAAIMTFLTAKLDLPVEEGEIK 383 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 L+K DL T++V+EF ELQG +G+EYA+L E +A+ E PR + +P Sbjct: 384 HLADLAKTDLLTQMVQEFTELQGVMGREYALLDGEEPETAEAVFEQYLPRFAGDELPHTT 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--- 529 + + +SLADK DT+ +++ P+GS+DP+ALRR T+G++ I+++ +I + Sbjct: 444 LGLLLSLADKFDTITGSFSLGLIPTGSQDPFALRRQTIGVLNILIDAGWNINCDEVFAYI 503 Query: 530 ---------EDQNLILFFHD----RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + +++I HD RLK L D + +I+ +L+ ++ N IV Sbjct: 504 LEVLGTDRNKREDVIASLHDYFALRLKNILQDAGFDYHIIDCVLQGDSMNAAEIVKRATA 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L + S + E+ L + R+ + +++ +N ++ + E EK LYA Sbjct: 564 LRDSEFSTQ-EELLQAYTRVANM--VKDAQNTDVDDTL----FETEEEKALYAACLAVEA 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + ++ Y ++L I F D VLV + V++NR++LL +I V Sbjct: 617 ELPQAYAVYDYRCAVEILGRAVSAINNFLDNVLVMHEKEAVKNNRMNLLTRTLGLISPVG 676 Query: 697 NVQKI 701 +++K+ Sbjct: 677 DIKKL 681 >gi|229824060|ref|ZP_04450129.1| hypothetical protein GCWU000282_01364 [Catonella morbi ATCC 51271] gi|229786414|gb|EEP22528.1| hypothetical protein GCWU000282_01364 [Catonella morbi ATCC 51271] Length = 681 Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 214/725 (29%), Positives = 348/725 (48%), Gaps = 88/725 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI EEIPAR ++ L + L EE + Y+++ Y TP RL + + GL+ Sbjct: 1 MAEFLLEIGMEEIPARFLLDLSQQLEKRVADFLAEERLAYESLSAYATPRRLAVLVHGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S + + GP + G KA GF++ G S + + KG+ Y+ V Sbjct: 61 ERSQDVSTKAKGPSLKIAKDAEGNWTKAALGFIKGQG---ASQEDVIIESIKGEDYIFVN 117 Query: 114 RK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + P + + VL + V ++ + +P +M W +P +IRP+ I+ +L Sbjct: 118 KHLPGQAADQVLLGLNRV-LEAMTFPVTMTWHDYETP-----FIRPIHWIVALL-----D 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + ++ L+ + I+ GHRF H + + Y+ L E VL+D E RR I Sbjct: 167 QALVPLEFVGVKSDRISRGHRFLG-HDVTLAQATDYVEALREQHVLVDFEERRANIRQQL 225 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LASA G ++ D+DLLEE+ +VEW VF G F+ KYL +P ++ ++ +Q+ F Sbjct: 226 ANLASAQGWQVPVDEDLLEEVTAIVEWPTVFYGDFEDKYLSVPHCVLITAMRDHQRYFYA 285 Query: 293 RTREGVLANCFILVSNIQASDGG-AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V N +D A +V+GN +V+ ARLEDAL F++ D LK Sbjct: 286 LDAKGELLPVFISVRN--GNDQHLANVVKGNQKVLRARLEDALFFYQED---------LK 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L F +D + +V H K+GT ++ R+ L +++ ++ D A Sbjct: 335 HD-LNFFVD------------KLANVNEHFKLGTLADKQVRVGALIRQLQSNLNLDQASY 381 Query: 412 D---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T++V EF ELQG+IG+ YA E AI P + Sbjct: 382 EAALRASQIYKFDLMTQVVGEFDELQGQIGEIYARHYGEEALVAQAIGTQYLPTTSGGAL 441 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--- 525 P S ++LADKLDTL ++ + P+GS DPYALRR +GI+ I+L+ ++ L Sbjct: 442 PNQDASALLALADKLDTLFQYFKVGLIPTGSNDPYALRRTAMGIVEILLDRGWELDLLPV 501 Query: 526 -SQFIE----DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 Q +E DQ L+ F R+ ++L ++ + D I+ I ++ V + Sbjct: 502 FKQLVEAQEGDQELLKQLADFVWARVAVHLRNQSVDMDQIQGIGAAKH----LEVGKANY 557 Query: 577 LNEFFSSAKG------EKFLLSAKRIFQILA-IEEKKNREISL-EISPQYLLLEAEKRLY 628 + F + K ++FL + R+ + A ++E+ + L + + LLEA ++ Sbjct: 558 VAHFLKTHKDKNPTAYKRFLEAITRVVNLGAKVQEETQLNLDLAQTDSEAKLLEAAAKI- 616 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + S+D + L ++ IE +FD VN DD +R NRL+ L+ + Sbjct: 617 -------DQYKISVDALYMY-----LDNLVPVIEAYFDDNKVNADDETIRANRLATLKVL 664 Query: 689 KNIIL 693 +L Sbjct: 665 TEAVL 669 >gi|57168130|ref|ZP_00367269.1| glycyl-tRNA synthetase, beta subunit [Campylobacter coli RM2228] gi|57020504|gb|EAL57173.1| glycyl-tRNA synthetase, beta subunit [Campylobacter coli RM2228] Length = 664 Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 199/722 (27%), Positives = 359/722 (49%), Gaps = 81/722 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L++ ++ + + Y+TP RL ++ + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKDVLEDYRLV-SDFKFYYTPRRLVIFHENFA 59 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G + G A FL+ G IS+ ++ KG L + Sbjct: 60 SKQEDSFAEFIGAPKNVAYKDGQLSAAGQSFLQKAG---ISENELSFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L ++VL ++ ++ + + KSMRW T ++F +IR ++SI+CIL + Sbjct: 117 AIKGLQSQEVLGEMIHQFLKSLNFGKSMRWGT-----NSFEFIRAIRSIVCIL-----DD 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ + + T+ HR + + + Y LE+ ++LDP R+ IL Sbjct: 167 NLVEFESYGVKSAKKTFIHRSVSYDLQEFNNAKEYFSLLEKNYIILDPLQRKERILKQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L S +++ ED++LL E+I + E+ +GSF+++YL +P E+I +++ NQ+ F Sbjct: 227 LLESQNNIQIGEDEELLAEVIAITEYPNALLGSFEEEYLQIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D Sbjct: 287 NEKG-LSNHFIVVSNAVCEDY-SKIIHGNERVLRARLSDAMFFYQND------------- 331 Query: 354 ALKFNLDLSKPLD-QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 L L+ +++A++ L+ +GT ++ R + + + Q+++ D +A + Sbjct: 332 -------LQSGLNPEKLAKMTYLE-----GLGTMQDKSLREIKIAEVLCQMLNNDKIANI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 AI +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 380 STAIKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPST 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L + + +E Sbjct: 440 EFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQALLEK 499 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 Q L F +RL + + I+A+L ++ +L+ I +K L E Sbjct: 500 LASHYKNFDMQILKDFIFERLYTFY---SVNASFIKAVLSSKSTDLIHINQSVKALIELS 556 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD-FGTH-IQ 639 A ++ + KR+ I + S ++ + EAE +LY + H +Q Sbjct: 557 KKANFQENFTTFKRLANIA-------NKTSHKVDENLFVEEAENKLYKAFKEKIQAHSLQ 609 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 E +++ L S+ I+ FFD+V++N D ++++NR +L+ I L + +++ Sbjct: 610 EKLEN---------LFSLKPFIDEFFDKVMINAKDEKLKNNRQALIYEIYEEFLKIADLK 660 Query: 700 KI 701 ++ Sbjct: 661 EL 662 >gi|289547827|ref|YP_003472815.1| glycyl-tRNA synthetase subunit beta [Thermocrinis albus DSM 14484] gi|289181444|gb|ADC88688.1| glycyl-tRNA synthetase, beta subunit [Thermocrinis albus DSM 14484] Length = 654 Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 227/703 (32%), Positives = 347/703 (49%), Gaps = 73/703 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+PAR+ A E L LLK + +I Y TP RL YLK Sbjct: 2 DLLIEIGTEELPARVIPLAVEYLRERFSVLLKRDDLI-----TYATPRRLAFYLKDFKNE 56 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-- 114 E+ E +GP + G KA+ FL + ++KD +G Y+AV R Sbjct: 57 GEEREELIVGPPLSVAYQDGKPTKALLAFLDRVKAREEDLIHLQKD--RG-TYVAVRRIV 113 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +E + K+ + + VP+PKSMRW + S + RP++ I C L + + Sbjct: 114 KEESPLELLSKSFEEILLS-VPFPKSMRWDS-----SGVRFSRPVRWI-CALWGD----Q 162 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ L I T GHRF + I++ S + Y++ L +A V+ R IL+ Sbjct: 163 IVPLTFGNIKADRKTKGHRFLSSGWIELGSAEEYLQKLTDAYVIPQFNERLGLILSMLKE 222 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + L EE+ LVE+ V +GSF+ KYL LPE++I + +Q+ F R+ Sbjct: 223 EAYRLGGVPEYPEGLQEEVANLVEFPFVVVGSFEDKYLELPEKVIITVLAHHQRFFCVRS 282 Query: 295 RE-GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +E L F+ VSN +G IV+G +VV ARLEDAL F+K D Sbjct: 283 QEEDRLLPFFLAVSNNAPKNG--EIVEGYRKVVKARLEDALFFYKED------------- 327 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL--- 410 L +PLDQ + +L VVFH + G+ ++ R+ L +KIA ++ + + Sbjct: 328 -------LKRPLDQLVEQLS--GVVFHPRAGSMWDKTIRVMELSQKIAGTLNLEEGIKEK 378 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA LSKADL T +VRE ELQG +G YA Q E+ A+ E P + VP Sbjct: 379 IKRAAYLSKADLLTHMVREMDELQGYMGYVYAKAQGEDEEVARALYEQYLPARAHDPVPL 438 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S +SLADKLDT+ E P+GS DPY L+RA G++ II +++D+ + +E Sbjct: 439 SPVSYVLSLADKLDTIKTLLEAGEVPTGSSDPYGLKRAAFGVLAIIDAHQLDLHIDDLVE 498 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 L F +RL+ YL D++ A+L + L +++IK + + + E+F Sbjct: 499 VSPKLEEFLRNRLEAYLEPYG--QDVVRAVLSVHSP--LRPLEVIKLVRSIANIREEERF 554 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + +++ I K E ++ L EAEKRLY + ++ES Sbjct: 555 KDVVEVYRRVVRILPKGWLED--KVKETLLREEAEKRLYEKL----LQLEES------PS 602 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + DL I ++ FFD VLV D +R NRL+LL ++ ++ Sbjct: 603 LSDLW-KIKPVVDEFFDSVLVMDKDEAIRTNRLALLMRVRKLM 644 >gi|172061660|ref|YP_001809312.1| glycyl-tRNA synthetase subunit beta [Burkholderia ambifaria MC40-6] gi|171994177|gb|ACB65096.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MC40-6] Length = 699 Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 209/717 (29%), Positives = 341/717 (47%), Gaps = 71/717 (9%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +PEK + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPEKQVREKVLP 81 Query: 74 RVGAGKKAIDGFLRSTGLQ------------TISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 A+D R T +I+D + +D K + + + Sbjct: 82 V----SVALDAEGRPTAPLAKKLAALGHPNLSIADLERAQD-GKAEAFFVNYSAAGATLA 136 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 D L+ + + K+P PK M + S ++RP+ + + ++++ + Sbjct: 137 DGLQAALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAF 189 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF + + +Q Y L ++ V+ RR I + A+ G Sbjct: 190 GIDAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHAN--G 247 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L Sbjct: 248 DTVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLR 307 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 + F++VSNI G I++GN RVV RL DA F+++D+ Sbjct: 308 SRFLIVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDKK------------------ 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 KPL R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KA Sbjct: 349 --KPLADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKA 404 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T++V EFPELQG +G YA E A EH +PR + +PT +S V+LA Sbjct: 405 DLLTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALA 464 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN------- 533 DKL+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 465 DKLETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVP 524 Query: 534 --------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + FF DRL+ L +R ++A+L + +V + + EF A+ Sbjct: 525 GVAESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAE 584 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Sbjct: 585 AEALAAANKRISNIL---RKSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEAR 641 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 642 AYTGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|188993684|ref|YP_001905694.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. B100] gi|229558587|sp|B0RYX3|SYGB_XANCB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|167735444|emb|CAP53659.1| Glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris] Length = 698 Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 206/733 (28%), Positives = 336/733 (45%), Gaps = 78/733 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVLAGLEKRGVAVTRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G +A+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGKPTRALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P +L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 120 VHRAVTPGAQAAALLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF--- 171 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + +I +L + IT GHRF I + + YI L A VL+D + RR I+ Sbjct: 172 --GDTVIPAELLGVRGDRITRGHRFMHDGDIALAAPGDYIDALRAAHVLVDADARRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 EEVDAAARQAGGSARISDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NI + D A + +G RV+ R DA F Sbjct: 290 FPVLDDGGKLTEQFIGIANIVSKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 336 -------FDEDLKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADPV 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + I Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLPKLI 506 Query: 530 E--------------DQN-------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + D+N L F DRLK Y D+ + A+ +L Sbjct: 507 DVGLASLPDAVKPHADRNTETVRADLYDFILDRLKGYYADKGVAATHFNAVAELTPASLY 566 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I + F + + E + KRI IL K EI +I L AE+ L Sbjct: 567 DFDRRIDAIGIFATLPEAEALAAANKRIRNIL---RKVEGEIPGDIDTTLLREPAEEALA 623 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + Sbjct: 624 EAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKL 683 Query: 689 KNIILIVINVQKI 701 + + V ++ + Sbjct: 684 GDRLGSVAAIEHL 696 >gi|154249735|ref|YP_001410560.1| glycyl-tRNA synthetase, beta subunit [Fervidobacterium nodosum Rt17-B1] gi|154153671|gb|ABS60903.1| glycyl-tRNA synthetase, beta subunit [Fervidobacterium nodosum Rt17-B1] Length = 672 Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 207/731 (28%), Positives = 353/731 (48%), Gaps = 110/731 (15%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL E+ EE+P + + LS + L EG+ Y+ + + P R ++GL + Sbjct: 6 EFLFELGIEELPTTEINGLIQQLSDKIQNTLSVEGINYEKFQIFVAPRRFGFVIEGLPDN 65 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +PEK+ E+ GP KA+ GFL+S T+ + +I D Y+ + + Sbjct: 66 TPEKVIEKKGPAANIAFDENNQPTKALLGFLKSNN-STLEEVKII------DNYVYITKT 118 Query: 116 PKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K L IE+ LKT VP I + + K M+W+ + ++R +L +L K Sbjct: 119 QKGLPIEEFLKTTVPSIITSIKFRKPMKWAD-----GKYEFVRIPHHVLALLNG-----K 168 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+++++ EI N T GHRF +V S+ Y L + V+ E R I + Sbjct: 169 IVEMEIFEIKSSNKTVGHRFVMDEYFEVNSVQDYFDKLSKYYVIPKLEDRIKFIKSQLEE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 G + +D++L++E+ L E+ ++ G+F +KYL LPEELI+ TIK +Q+ F + Sbjct: 229 FEKN-GYTIDKDEELIQEVAILTEYPKLISGTFLEKYLTLPEELIKTTIKHHQRSFTVHS 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + N F+ ++ + G A +G RV+ ARLEDA +++++D Sbjct: 288 GNKI-TNTFVAFIDMPMDELGNA-KKGYERVINARLEDAKYYYEKD-------------- 331 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID----ADVAL 410 + F L+ ++++ ++VF ++GT +++SRI L KKI ++++ +D L Sbjct: 332 IHFKLE---SFNEKLK-----EIVFQKELGTLYDKISRIEQLSKKIIEILELEKISDNIL 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 R L KAD+ T +V EFPELQG +G+ YA+ E + IEEH P+ Sbjct: 384 --RTAKLCKADIGTHVVYEFPELQGIMGRIYALKDGEAENIAYGIEEHYSSN------PS 435 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 V +AD++DT++ + I PSGSKDPY LR T I II + D+ L +E Sbjct: 436 TVEGAVVGIADRIDTIVGNFIIGNIPSGSKDPYGLRSKTDDIFAIIEKFSWDLDLKVLLE 495 Query: 531 D----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 LI FF +R +LY + ++R+D+ A +KHL Sbjct: 496 KAAELLGKELPTTLIEFFENRFELY--NSNVRYDIARA---------------VKHL--- 535 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLE---------ISPQY----LLLEAEKRL 627 K + +LSAK I++++ EE ++ + E IS + + E+EK+L Sbjct: 536 --WKKPLRGILSAKAIYKLVGKEEFEHLLVGFERVHNISKKHISEHFDSAKFVEESEKKL 593 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + + +++ H + + L + I+ +FD+V V +D ++R NRL L Sbjct: 594 FQKYIEVKPFVLDAIKHLDFESALEKLIELRPYIDEYFDKVFVMCEDEDLRMNRLGFL-- 651 Query: 688 IKNIILIVINV 698 KNI ++ + + Sbjct: 652 -KNIDMLFMEI 661 >gi|332524722|ref|ZP_08400920.1| glycyl-tRNA synthetase subunit beta [Rubrivivax benzoatilyticus JA2] gi|332108029|gb|EGJ09253.1| glycyl-tRNA synthetase subunit beta [Rubrivivax benzoatilyticus JA2] Length = 704 Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 196/731 (26%), Positives = 353/731 (48%), Gaps = 64/731 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYW--TPHRLFLYLKGLS 60 + L+E++ EE+P + K E + +L L+ + + + +P RL + + ++ Sbjct: 6 NLLVELFVEELPPKALKKLGEAFAAVLADGLRAQQLAAADAAVTAYASPRRLAVQVAAVA 65 Query: 61 PHSPEK-IEERLGP---RVGAGKKAIDGFLR-----STGLQTISDCQIKKDPKKGDVYLA 111 +P++ + +L P + + A L+ G + ++ + + + K +YL Sbjct: 66 AKAPDQAVSTKLMPVAVALSSDGSASPALLKKLAALGHGAEVVAQLKRQGEGKNEALYLD 125 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ L E + K + A+ K+P PK M++ ++ ++RP ++ + Sbjct: 126 SVQPGATLAEGLQKALAD-AVAKLPIPKVMKYQLADG-WTSVDFVRPAHGLIAL-----H 178 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDL-EEAMVLLDPECRRNAIL 229 +++ + + + G T GHRF A P ++++ D Y L +E V+ RR I+ Sbjct: 179 GSQVVPVGVLGLQAGRTTRGHRFEAAAPTVEIRDADSYAAQLRDEGAVIASFAERRAEIV 238 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A+ GL+ ++D LL+E+ LVE V + F+ ++L +P+E + LT+K NQK Sbjct: 239 RQLNEAAANEGLKPIDDDALLDEVTALVERPNVLLARFEPEFLAVPQECLILTMKANQKY 298 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L F++VSNI+ +D + +V GN RVV RL DA F Sbjct: 299 FPLLDAQGRLTERFLVVSNIRPAD-ASRVVGGNERVVRPRLADAKFF------------- 344 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 F+ D K L+ R+ L VV+H K+G+QGERV R+R + + I + + Sbjct: 345 -------FDQDRKKTLESRIPAL--AKVVYHGKLGSQGERVERVRTIARHIGEQLGGSAL 395 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A DRA +L+KADL T++V EFPELQG +G YA E + A+E+H +PR + Sbjct: 396 AAQADRAALLAKADLLTDMVGEFPELQGVMGGYYARHDGETEAVALAVEDHYRPRFAGDA 455 Query: 468 VPTNK---ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +P ITV+LADKL+TL + I + P+G KDP+ALRR LG+IR+++E + + Sbjct: 456 LPRTDAGLAGITVALADKLETLAGLFGIGQLPTGDKDPFALRRHALGVIRMLVEKALPLS 515 Query: 525 LSQFIE-------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + + ++ F +RL +L ++ ++A++ + + Sbjct: 516 VPELVSAAFRAFPEGHGQAQAEVLRFLDERLVGWLREQGYSAHEVDAVVALRTERWAELP 575 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + F + + + KR+ IL +K + + P L+ AE L+ + Sbjct: 576 QRLAAVRAFAALPEAPALAAANKRVGNIL---KKSDEAAGGAVEPARLVEPAEAALFDAL 632 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 E+ Y L ++ P++ FFD V+VN DD +R NRL+LL + Sbjct: 633 GRVAPQADEAFARADYTASLQALAALKAPVDAFFDAVMVNADDPALRRNRLALLGTLHAA 692 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 693 MNRVADLSRLA 703 >gi|78049866|ref|YP_366041.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038296|emb|CAJ26041.1| glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 746 Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 206/785 (26%), Positives = 343/785 (43%), Gaps = 134/785 (17%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + + ++ L++ GV + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLEQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P D+L I+ AI +P PK MRW +++ RP++ ++ + +E Sbjct: 120 VHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGSE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I+ Sbjct: 175 -----VIPAELLGVRGDRITRGHRFMHGGAVSLAAPGDYVDALRAAHVLVDPDARRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 ++ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 DEVQAAVRQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NI + D A + +G RV+ R DA F+ D Sbjct: 290 FPVLDDGGTLTEQFIGIANIHSKDV-AEVAKGYERVIRPRFADAKFFFDED--------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 LK+ LS V + AK+GT ++V+R+ L + IA I AD Sbjct: 340 LKQGLQAMGEGLSS-------------VTYQAKLGTVADKVARVAALAEAIAPQIGADPV 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAEAAGEPSEISLAIDEAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI------ 523 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKKLL 506 Query: 524 -------------------------------------------PLSQFIEDQNLILFFHD 540 L+Q +D + F D Sbjct: 507 VEARNQINVQASARQTLKTEAALSKAKDAGAALPKSVEKEAHTALAQSGQDAEIFDFILD 566 Query: 541 RLKLYLHDRDI---RHDLIEAILRPENDNLLTIVDLIKH-----------------LNEF 580 RL+ Y D+ + + + A+ ++ + T ++ H + F Sbjct: 567 RLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTNVGAHPGATHASLYDFDRRIDAIGIF 626 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY----AVISDFGT 636 + + + + KRI IL K EI +I L AE+ L A I D G Sbjct: 627 ATLPEADALAAANKRIRNIL---RKVEGEIPGDIDTSLLREPAEQALAEAVEAAIGDTG- 682 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V Sbjct: 683 ---DALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKLGDRLGSVA 739 Query: 697 NVQKI 701 ++ + Sbjct: 740 AIEHL 744 >gi|254457801|ref|ZP_05071228.1| glycyl-tRNA synthetase, beta subunit [Campylobacterales bacterium GD 1] gi|207085194|gb|EDZ62479.1| glycyl-tRNA synthetase, beta subunit [Campylobacterales bacterium GD 1] Length = 672 Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 199/719 (27%), Positives = 354/719 (49%), Gaps = 76/719 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA K ++ + +L++ ++ + Y+TP RL ++ + + Sbjct: 6 LIEIGVEELPAVPLLKELRNIEKKYVDILEKNSLLGE-FEFYYTPRRLVIWHREFNTQQA 64 Query: 65 EKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + +EE G + K A GF + G+ +I + K +Y K K Sbjct: 65 DSVEEFFGAPIAVAYKDGEPTPAALGFAKKCGV-SIDEISAGTKGGKEVLYYKKDVKGKE 123 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 IE +L I+ I + + KSMRW + S+ S+IRP++ + +L ++++D+ Sbjct: 124 SIE-LLSDIINTWINSLDFGKSMRWGS-----SSESFIRPVRWVNVLL-----GDELVDV 172 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 +L + T+ HR + + Y L++ V L E RR IL + L Sbjct: 173 ELFGVTSKKETFVHRISNFDSVSISGAKEYFDVLKKGGVTLFQEQRREDILANFASLEKD 232 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 G+++ D DLL+E++ + E +G+FD+++L LP E+I ++K +Q+ F ++G Sbjct: 233 NGIQIEVDADLLDEVVAITEHPTALLGTFDEEFLRLPPEVIITSMKEHQRYFPV-FKDGK 291 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN +D + +++GN RV+ RL D L F+ D N + L++ Sbjct: 292 LLNKFVVVSNALTNDF-SEVIEGNERVLRPRLADGLFFYDNDLKNGLSTEGLEK------ 344 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI------DADVALVD 412 V F +G+ +++ R KIA ++ DA +D Sbjct: 345 ------------------VAFFKGLGSVADKIQR----EAKIANILFDKYKPDAKKEDLD 382 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RAI L+KADL +E+V EF ELQG +G YA+ Q E+ AI E P G +P+ Sbjct: 383 RAISLAKADLTSEMVYEFTELQGLMGSYYALEQGESQEVATAINEQYLPDGEDSALPSTA 442 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---- 528 IS V+++ KLDTL+ ++IN+ P+GS+DP+ALRRA G++RI E+ ++ + + Sbjct: 443 ISAIVAMSIKLDTLLALFSINQIPTGSRDPFALRRAVNGLVRITREHNLEFDIVETMTEL 502 Query: 529 ------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 I+ Q L FF +R+K Y + ++EA+L ++ + I+ L+ S Sbjct: 503 ASGYAEIDMQKLESFFLERVKQYYK---VNPSIVEAVLASGEREIVAMGQKIEALDAIAS 559 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + + + KR+ I K+ ++S ++S L E +K A+ + + +S Sbjct: 560 AEGFSESFSTFKRVANI-----TKDIDLSQDMSVDAKLFE-DKSEEALFNAYNNVASKSY 613 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D Y + D L + ++ FF+ V+VN ++ V++NR SL+ I IL + +++++ Sbjct: 614 DS--YEEELDALLGLKPELDKFFEGVMVNAENEAVKNNRKSLVASIYKSILNIADIKEV 670 >gi|172037905|ref|YP_001804406.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. ATCC 51142] gi|171699359|gb|ACB52340.1| glycyl-tRNA synthetase beta chain [Cyanothece sp. ATCC 51142] Length = 711 Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 199/726 (27%), Positives = 342/726 (47%), Gaps = 70/726 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA +A I+ L+E + N+ Y TP RL + + GL+ Sbjct: 3 FLLEVGTEELPADFIDEAIAQWKQIIPNSLEENFLTPDNLAVYGTPRRLAILISGLAEQQ 62 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP + G KA +GF R + I + I+ +KGD + Sbjct: 63 KDRDEVIKGPPAKAAFKNGKPTKAAEGFARKQEVD-IKELDIRP-TEKGDFVFVEKKIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +++L+ ++P I + + MRW + RP++ ++ + + +I++ Sbjct: 121 RQTKEILQELIPHWINSLEGRRFMRWGNGE-----LRFSRPIRWLVALCDEQILPIEIVN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I ++ GHR P P+ + Y+ L A V +DP+ R+ I D +A Sbjct: 176 GD-STIKSDRLSRGHRILHPDPVSISQASDYVETLRSAYVEVDPKQRQQIIEKDIETIAK 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + +DLL E+I L+E+ G FD ++L LP E+I + +Q+ F + + Sbjct: 235 DLKGKADLPEDLLTEVINLIEYPTAVAGKFDPEFLNLPTEVIITVMVKHQRYFAVKKSDN 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N + I QGN RV+ ARL DA F+ D Sbjct: 295 ELLPNFITIANGDPNKKDI-IAQGNERVIRARLADAQFFYTSD----------------- 336 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRA 414 +PLD + L+ +V F ++GT ++V RI + +++A+ + + + ++ Sbjct: 337 ---CDEPLDSYLPELE--NVTFQKELGTMRDKVDRIMEMAQQMAEQLEITEKEQEEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA++ E+ I EH PRG + +P Sbjct: 392 ALLCKADLVTQMVYEFPELQGVMGQKYALVSGESEQVAQGIFEHYLPRGANDIMPKTLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------- 527 V +AD+LDTLI+ + + P+GS DP+ALRRA II + + ++ I LSQ Sbjct: 452 QVVGIADRLDTLISIFGLGMIPTGSGDPFALRRAANAIISVTWDAQLPINLSQLLIQGCE 511 Query: 528 -FIED--------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 F+ D + L FF R++ L D +I +DL+ A+L + NLL Sbjct: 512 AFMADHVDKQSPLEALQTFFIQRIQTLLQDEFNIDYDLVNAVLGEADAQYTDRALQNLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRL 627 + D + L S+ +K + R ++ A + + + L E +E+ Sbjct: 572 VKDRAEFLQAIRSNGMLDKIYETINRSTRLAAKGDLDYTVLDPSQVVETKLFEKSSEQEF 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREVRDNRLSL 684 Y + + ++ + Y + + L I + FFD VLV ++++VR+NRL+L Sbjct: 632 YNGLMALLSKTIQAQSERNYQLLTEGLLDIVPKVSEFFDGENSVLVMDENQKVRENRLNL 691 Query: 685 LQYIKN 690 L ++N Sbjct: 692 LGVLRN 697 >gi|115352805|ref|YP_774644.1| glycyl-tRNA synthetase subunit beta [Burkholderia ambifaria AMMD] gi|115282793|gb|ABI88310.1| glycyl-tRNA synthetase beta chain [Burkholderia ambifaria AMMD] Length = 699 Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 208/713 (29%), Positives = 342/713 (47%), Gaps = 63/713 (8%) Query: 15 ARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGP 73 AR+ AE L+ L EG + +Y TP RL + ++ + +PEK + E++ P Sbjct: 24 ARLGDAFAEGLAQRLAARDLVEGELV--FERYATPRRLAVVVQNVRAVAPEKQVREKVLP 81 Query: 74 RVGA----GKKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 A GK + L +I+D + +D K + + + D L+ Sbjct: 82 VSVALDAEGKPTAPLAKKLAALGHPHLSIADLERAQD-GKAEAFFVNYSAAGATLADGLQ 140 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + + K+P PK M + + ++RP+ + + ++++ + I Sbjct: 141 AALDETLAKLPIPKFMTYQRPDG--TDVKFVRPVHRLTVL-----HDDRVVPVTAFGIDA 193 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 G+ T GHRF + + +Q Y L ++ V+ RR I + A+ G +V Sbjct: 194 GDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHAN--GDTVV 251 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + F+ Sbjct: 252 MPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSRFL 311 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 +VSNI G I++GN RVV RL DA F+++D+ KP Sbjct: 312 IVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDKK--------------------KP 350 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL T Sbjct: 351 LADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADLLT 408 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E A EH +PR + +PT +S V+LADKL+ Sbjct: 409 DMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADKLE 468 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN----------- 533 T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 469 TIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGVAE 528 Query: 534 ----LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 529 STDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEAEAL 588 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 589 AAANKRISNIL---KKSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAYTG 645 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 646 ALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|305431720|ref|ZP_07400888.1| glycyl-tRNA synthetase beta subunit [Campylobacter coli JV20] gi|304445202|gb|EFM37847.1| glycyl-tRNA synthetase beta subunit [Campylobacter coli JV20] Length = 664 Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 199/722 (27%), Positives = 358/722 (49%), Gaps = 81/722 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L++ ++ + + Y+TP RL ++ K + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKDVLEDYRLV-SDFKFYYTPRRLVIFHKNFA 59 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G + G A FL+ G IS+ ++ KG L + Sbjct: 60 SKQEDSFAEFIGAPKNVAYKDGQLSAAGQSFLQKAG---ISENELSFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L ++VL ++ ++ + + KSMRW ++F +IR ++SI+CIL + Sbjct: 117 AIKGLQSQEVLGEMIHQFLKSLNFGKSMRWGA-----NSFEFIRAIRSIVCIL-----DD 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ + + T+ HR + + + Y LE+ ++LDP R+ IL Sbjct: 167 NLVEFESYGVKSAKKTFIHRSVSYDLQEFNNAKEYFSLLEKNYIILDPLQRKERILKQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L S +++ ED++LL E+I + E+ +GSF+++YL +P E+I +++ NQ+ F Sbjct: 227 LLESQNNIQIGEDEELLAEVIAITEYPNALLGSFEEEYLQIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D Sbjct: 287 NEKG-LSNHFIVVSNAVCEDY-SKIIHGNERVLRARLSDAMFFYQND------------- 331 Query: 354 ALKFNLDLSKPLD-QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 L L+ +++A++ L+ +GT ++ R + + + Q+++ D +A + Sbjct: 332 -------LQSGLNPEKLAKMTYLE-----GLGTMQDKSLREIKIAEVLCQMLNNDKIANI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 AI +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 380 STAIKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPST 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L + + +E Sbjct: 440 EFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQALLEK 499 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 Q L F +RL + + I+A+L ++ +L+ I +K L E Sbjct: 500 LASHYKNFDMQILKDFIFERLYTFY---SVNASFIKAVLSSKSTDLIHINQSVKALIELS 556 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD-FGTH-IQ 639 A ++ + KR+ I + S ++ + EAE +LY + H +Q Sbjct: 557 KKANFQENFTTFKRLANIA-------NKTSHKVDENLFVEEAENKLYKAFKEKIQAHSLQ 609 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 E +++ L S+ I+ FFD+V++N D ++++NR +L+ I L + +++ Sbjct: 610 EKLEN---------LFSLKPFIDEFFDKVMINAKDEKLKNNRQALIYEIYEEFLKIADLK 660 Query: 700 KI 701 ++ Sbjct: 661 EL 662 >gi|75907017|ref|YP_321313.1| glycyl-tRNA synthetase subunit beta [Anabaena variabilis ATCC 29413] gi|75700742|gb|ABA20418.1| glycyl-tRNA synthetase beta chain [Anabaena variabilis ATCC 29413] Length = 716 Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 210/749 (28%), Positives = 341/749 (45%), Gaps = 83/749 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L + +++ Y TP RL + + GL Sbjct: 1 MPGFLLEVGTEELPASFLSGAIAQWRSRIPQSLAANSLTSESVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A K A GF + G++ + +++ KG+ + Sbjct: 61 SQQPDREEEIKGPPAQAAFKDGQPTPAAVGFAKKQGVE-LEALEVRPT-DKGEFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L +VP I + + MRW S RP++ ++ +L E Sbjct: 119 TPGRPVAEILTELVPQWIYHLEGKRLMRWGDGDVRFS-----RPIRWLVTLL-----DEA 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+ L+L + I+YGHR P PI +Q Y+ L V +D + R I Sbjct: 169 ILPLELVNGSLTVKSDRISYGHRVLHPAPITIQQASDYVNTLRSGYVTVDAKERAAIIKE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +G DLLEE+ LVEW +G F++++L LP E+ + ++Q+ F Sbjct: 229 QVETTVQKLGGYTEIYPDLLEEVTNLVEWPSPVVGKFEEEFLNLPTEVTTTVMVSHQRYF 288 Query: 291 -VTRTRE-GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 V +T + L FI VSN + I GN RV+ ARL D F+K Sbjct: 289 PVFKTGDHKELLPYFITVSNGDPTKSDV-IAVGNERVIRARLADGQFFYK---------- 337 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLID 405 DLSK L+ + +L+ V F +G+ +V RI + KI+ +L + Sbjct: 338 ----------TDLSKSLESYLPQLET--VTFQEDLGSLRGKVERIVKVAAKISSQLELGE 385 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D + RA +L KADL T++V EFPELQG +G++YAV E+ AI EH PRG Sbjct: 386 SDRQHIQRATLLCKADLVTQMVFEFPELQGIMGQKYAVASGESPEVATAIFEHYLPRGAD 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P LAD+LDTL++ + + P+GS DP+ALRRA +I I + I L Sbjct: 446 DILPQTLTGQVAGLADRLDTLVSIFGLGLIPTGSSDPFALRRAANAVINITWAANLQINL 505 Query: 526 ------------SQFIEDQNLIL-----FFHDRLKLYLH-DRDIRHDLIEAILRPEND-- 565 +Q+ +DQ ++ FF R++ L ++ I +DL+ A+L +ND Sbjct: 506 ASLLAQTVTEFATQYNKDQAPLITALNEFFLQRIRTLLQEEKQIDYDLVNAVLG-DNDPE 564 Query: 566 -------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISP 616 +LL + D +L + +K + R ++ A + +++ + + P Sbjct: 565 YTERALQDLLDVRDRALYLQQIRRDGTLDKIYETVNRSTRLAAQGDLDTQQLDPTSVLRP 624 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVD 673 + +E Y + Q + + Y + L I + FF D VLV Sbjct: 625 ELFQKSSESAFYDALLKLVPQTQAAQQSRNYQLLVAGLVEIAPTVSNFFDGADSVLVIDP 684 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKIV 702 D E++ NRL++L ++N ++ + IV Sbjct: 685 DPEIKRNRLNILGLLRNHARVLADFGAIV 713 >gi|317177763|dbj|BAJ55552.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F16] Length = 700 Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 215/738 (29%), Positives = 354/738 (47%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFSKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V D GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDYQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR + I+V + Y LE+ V+LDP+ R+ IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKAHRQEGFNFIQVDNPKAYFEVLEKNHVILDPKKRKAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHHIVVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFNQKSQESPTLHNGFIVVSNAINKDK-QKIITGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREVIIAQYLTQKYAS 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELIGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L +F+++ + PSGSKDP+ALRR + G+++II Sbjct: 450 YLPTSENAPLPSSVFSTIVALSLKLDSLFSFFSVGKIPSGSKDPFALRRLSFGLLKIIAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L +++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L SA F+ LA I + +N S E E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFFISLFKESQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|158333790|ref|YP_001514962.1| glycyl-tRNA synthetase subunit beta [Acaryochloris marina MBIC11017] gi|189082264|sp|B0CD57|SYGB_ACAM1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|158304031|gb|ABW25648.1| glycyl-tRNA synthetase, beta subunit [Acaryochloris marina MBIC11017] Length = 712 Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 209/731 (28%), Positives = 336/731 (45%), Gaps = 98/731 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + + L+E + Q+++ Y TP RL + +GL Sbjct: 1 MATFLLEVGTEELPASFVESAIQQWRSHIPNSLEEHLLTPQSLKVYGTPRRLAILAEGLP 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGD---VYLA 111 P++ E GP + G KA +GF R G++ I D +++ D +KG+ V Sbjct: 61 DQQPDQTVEVKGPPAKAAFKDGKPTKAAEGFARKQGVE-IKDFELR-DTEKGEFIFVQKT 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 L KP DVL ++P I + + MRWS S RP++ ++ +L Sbjct: 119 TLGKPAV---DVLADLIPTWIFSLEGKRFMRWSDGEVKFS-----RPIRWLVSLL----- 165 Query: 172 KEKIIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 + +I + L+ I + GHR P P+ ++ Y+ LE+A V +DPE R+ Sbjct: 166 DDHLIPIKLENSTGTISSDRTSSGHRVLHPDPVTIKHPQDYVATLEKASVQVDPEQRQTL 225 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I H A AV + V +DLL E+ LVEW +G F+ ++L LP E+I + ++Q Sbjct: 226 IKEQVHACAKAVKGKAVISEDLLAEVTYLVEWPTAVVGGFESEFLELPAEVITTEMVSHQ 285 Query: 288 KCFVTRTREGV-LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 + F +G L FI +SN + I GN RV+ ARL D F+K DQ Sbjct: 286 RYFPVEAPKGAKLLPHFITISNGDPAKSDI-ISSGNERVIRARLADGQFFYKADQ----- 339 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 + PL + + +L+ V F +G+ +V RI+ +A+ + Sbjct: 340 ---------------AMPLAEYLPKLET--VTFQEDLGSVRAKVDRIQANALWVAKQLQL 382 Query: 407 DVAL---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 D + V+RA L KADL T++V EFPELQG +G++YA+ E AI EH P+G Sbjct: 383 DQKVTQQVERAAQLCKADLVTQMVGEFPELQGVMGEKYAIASGEPTEIATAIVEHYLPKG 442 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------- 516 + +P + V +AD+LDTL++ + + P+GS DP+ALRRA I+ I+ Sbjct: 443 ANDQLPQTLVGQIVGIADRLDTLVSIFGLGMIPTGSSDPFALRRAANAILNIVWAANLDL 502 Query: 517 ----LENKIDIPLSQFI-----EDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDN 566 L + +Q E Q L FF RL+ L D + I +DL+ A+L + ++ Sbjct: 503 NLDQLLTETTAAFAQTFAKFQPEVQQLRDFFGQRLRSLLQDEQTIDYDLVNAVLGEKGEH 562 Query: 567 LLTI-VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE------------ 613 + VD++ + ++L + + + I E NR L Sbjct: 563 TQRVLVDVLDGRDR-------AQYLQTIRTNGTLDTIYETVNRAARLATKGDLASDVLDP 615 Query: 614 ---ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQ 667 + P+ +E+ Y + Q + + Y ++ L I + FF D Sbjct: 616 KGVVQPKLFEQSSEQVFYDGLLTLLPQTQAAQSSRDYQKLVQGLTKIAPSVSQFFDGDDS 675 Query: 668 VLVNVDDREVR 678 VLV +D ++R Sbjct: 676 VLVIAEDADLR 686 >gi|307153543|ref|YP_003888927.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7822] gi|306983771|gb|ADN15652.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7822] Length = 717 Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 205/733 (27%), Positives = 340/733 (46%), Gaps = 97/733 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA +A + L+E+ + Q + Y TP RL + +K L Sbjct: 1 MPSFLLEVGTEELPASFVDEAIAQWQNRIATSLEEQLLTPQGIEIYGTPRRLAVLIKELP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G KA++GFL G+ + +I+ + KGD + Sbjct: 61 TKQPDREEEIKGPAANVAFSNGKPTKALEGFLTRQGVAP-ENVEIR-NTNKGDFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L+ + P I ++ + MRW + RP++ ++ + E Sbjct: 119 IIGRTTTEILQELAPQWITQLEGRRFMRWGD-----GDLRFPRPIRWLVALWDKE----- 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L + +++GHR P + + + Y + L++A V + P RR++I Sbjct: 169 VLPLELVNGGTLLKSDRLSWGHRILHPEAVSIPEANAYQKSLQQAYVEVSPHQRRSSIKQ 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + A + V +LL+E++ LVE+ +G FD ++L LP E+I + T+Q+ F Sbjct: 229 QIEKAAKPLKGVAVIPPELLDEVVNLVEYPTAVVGKFDAEFLNLPTEVITTVMVTHQRYF 288 Query: 291 -----VTRTREGVLANCFILVSNIQASDGGAA--IVQGNSRVVAARLEDALHFWKRDQNN 343 +T + L FI ++N D A I GN RV+ ARL DA F+K Sbjct: 289 PVQTSTKKTNDSTLLPHFITIAN---GDPKKADLIASGNQRVIRARLADAQFFYK----- 340 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 D +PL+ + +L+ V F ++GT ++V RI +I+QL Sbjct: 341 ---------------ADCDQPLESYLPQLET--VTFQEQLGTIRDKVDRI----MEISQL 379 Query: 404 IDADVAL-------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 I + L ++ +L KADL T++V EFPELQG +G++YA++ E+ + I Sbjct: 380 IVEQLELEQQERTEIESTAMLCKADLVTQMVYEFPELQGVMGQKYALVSGESPNVAQGIF 439 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH PRG + +P + V LAD++DTL++ + + P+GS DP+ALRRA G+I++ Sbjct: 440 EHYLPRGADDMMPESLTGQVVGLADRIDTLVSIFGLGMIPTGSGDPFALRRAATGVIKVT 499 Query: 517 LENKIDIPLSQFIEDQN----------------LILFFHDRLKLYLHDR-DIRHDLIEAI 559 + I L IE + L F RL L D I +DL+ A+ Sbjct: 500 WYADLPIDLLALIEQSSEDFVTAHPDKTSPVEALKSFLIQRLSTLLQDDLKIDYDLVNAV 559 Query: 560 LRPEND---------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI 610 L END +LL + D + L E ++ K E+ + R ++ + +E+ Sbjct: 560 LG-ENDPEYAQRALEDLLDVRDRAQFLQEIRNNKKLEEIYETVNRSARLAVKGDLNTQEL 618 Query: 611 SLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF--- 665 I P +EK+ Y + D Q + + Y + D L I + FF Sbjct: 619 DPPKVIRPDLFEKSSEKQFYEALIDLVPTTQTAQAERNYQLLVDALAKIAPTVSNFFDGD 678 Query: 666 DQVLVNVDDREVR 678 D VLV ++ E+R Sbjct: 679 DSVLVMDENPEIR 691 >gi|46206198|ref|ZP_00047591.2| COG0751: Glycyl-tRNA synthetase, beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 352 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 126/291 (43%), Positives = 175/291 (60%), Gaps = 9/291 (3%) Query: 11 EEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEER 70 EEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL EER Sbjct: 2 EEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLPARGEAVREER 61 Query: 71 LGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPV 130 GPRVGA + A+ GFL+S GL +++ DPKKG+ YLAV+ +P R DVL I+P Sbjct: 62 RGPRVGAPEAAVQGFLKSAGLDSLAQATTVTDPKKGEFYLAVIERPGRETLDVLAEIIPG 121 Query: 131 AIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITY 190 I+ PWPKSMRW + A W+RPL+SI+ E +++ ++ I G T Sbjct: 122 IIRSFPWPKSMRWGAASAQPGALRWVRPLQSIVATFGPETETPEVVPFSVEGISAGTTTR 181 Query: 191 GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A GL+LVED+ LL Sbjct: 182 GHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAXDLAFARGLDLVEDEGLL 241 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 EE+ GLVE V MGSF++++ L I+ Q + TR +LA+ Sbjct: 242 EEVGGLVERPVVLMGSFEERF---------LEIRARQPGEIRATRMALLAD 283 >gi|167585508|ref|ZP_02377896.1| glycyl-tRNA synthetase subunit beta [Burkholderia ubonensis Bu] Length = 699 Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 202/691 (29%), Positives = 330/691 (47%), Gaps = 77/691 (11%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGPRVGAGKKAIDGFLRSTGLQT---------- 93 +Y TP RL + ++ + +PEK + E++ P + L + GL T Sbjct: 52 RYATPRRLAVVVQNVRAVAPEKQVREKVLP--------VSVALDAAGLPTAPLAKKLAAL 103 Query: 94 ------ISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTH 147 I+D + +D K + + + D L+ + + K+P PK M + Sbjct: 104 GHPNLSIADLERAQD-GKAEAFFVNYAAAGATLADGLQAALDETLAKLPIPKVMTYQRPD 162 Query: 148 SPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDH 207 + ++RP+ + + ++++ + I G+ T GHRF + + + Sbjct: 163 G--TDVQFVRPVHRLTVL-----HDDRVVPVTAFGIDAGDTTLGHRFLSDGLVAITHARA 215 Query: 208 YIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGS 266 Y L ++ V+ R+ I + A+ G +V + LL+E+ LVEW V+ Sbjct: 216 YADTLRDKGRVIAHFGDRKETIRTQLNEHAN--GDTVVMPEALLDEVTSLVEWPVVYPCR 273 Query: 267 FDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVV 326 F+ ++L +P+E + LT++TNQK F G L + F++VSNI+ G I++GN RVV Sbjct: 274 FEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSRFLIVSNIETKTPGE-IIEGNERVV 332 Query: 327 AARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQ 386 RL DA F+++D+ K L R+ L +VV+H K+GT Sbjct: 333 RPRLADAKFFFEQDKK--------------------KTLADRVPLL--ANVVYHNKLGTT 370 Query: 387 GERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQN 446 RV R+ L +IA I AD A RA L+KADL T++V EFPELQG +G YA Sbjct: 371 LARVERLEALAGEIAPAIGADAAHAKRAARLAKADLLTDMVGEFPELQGTMGTYYARHDG 430 Query: 447 ENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALR 506 E A EH +PR + +P+ +S V+LADKL+T++ W I P+G KDP+ALR Sbjct: 431 EPDDVAVACTEHYQPRFSGDALPSTPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALR 490 Query: 507 RATLGIIRIILENKIDIPLSQFI--------------EDQNLIL-FFHDRLKLYLHDRDI 551 R LG++R++LE ++ + L + E + IL FF DRL+ L +R Sbjct: 491 RHALGVLRVLLEKQLPLDLVSLLRLAHARFATVPDVAESTDAILAFFMDRLRGLLRERGY 550 Query: 552 RHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 ++A+L L IV + + EF A+ E + KRI IL +K + Sbjct: 551 TAGEVDAVLSLNPTRLDDIVARLDAVREFTRLAEAEALAAANKRISNIL---KKSESGAN 607 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVN 671 + P + AEK L+ ++ +Q ++ + Y L ++ P++ FFD V+VN Sbjct: 608 GAVQPTLFVEAAEKALHEQLTAVTPRVQSQLEARAYTGALSALAALRAPVDAFFDGVMVN 667 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 DD +R NRL+LL + + V ++ K+ Sbjct: 668 ADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|217076748|ref|YP_002334464.1| glycyl-tRNA synthetase, beta subunit [Thermosipho africanus TCF52B] gi|217036601|gb|ACJ75123.1| glycyl-tRNA synthetase, beta subunit [Thermosipho africanus TCF52B] Length = 637 Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 178/585 (30%), Positives = 295/585 (50%), Gaps = 82/585 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +++ EI EE+P L+ + LL EEG+ Y ++ ++ P R Y+K L Sbjct: 1 MAEYIFEIGVEELPTTEVENILVQLNEKISKLLDEEGLSYGELKVFYAPRRFGFYIKDLD 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +KI ++ GP V +A++GFL+S G ++ D IK D Y+ + Sbjct: 61 EKQGDKIVQKRGPSVNIAYDKNKQPTRALEGFLKSNG-ASLEDIVIK------DNYVYIE 113 Query: 114 RKPKRLIEDV-LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K + DV LK +P I K+ + K MRW +S++R IL + Sbjct: 114 KKIEGKSSDVILKENIPSIISKLSFRKPMRWGN-----GTYSFVRIPHWILSLYNG---- 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 K++D ++ ++ N T+GHRF PI++ +D Y + L++ V+ + R+ + N Sbjct: 165 -KVLDFEIFDLKADNKTFGHRFVKDEPIEISGIDDYFKKLKDTNVIALHDERKKVVENIL 223 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + +++D+DL++E++ L E+ QV GSF K+YL LPEELI TIK +Q+ F Sbjct: 224 SNYS------VLKDEDLIDEVVTLCEYPQVVEGSFSKEYLKLPEELITTTIKHHQRSFTV 277 Query: 293 RTREGVLANCFILVSNIQASDGGAAIV-QGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E + N F+ S I + G I+ +G +VV ARLEDA +++++D LK Sbjct: 278 YEGEKI-TNKFL--SFIDSPTGNIEIIKKGYEKVVNARLEDARYYYEKD---------LK 325 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 KFN L D++F +GT ++V RI + +K+ D + Sbjct: 326 IPLEKFNESLK-------------DIIFQKDLGTLMDKVERIEKISEKLCD--DLSIGYS 370 Query: 412 DRAIV-----LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D+ + L KAD+ + +V EFPELQG +G+ YA+ E+ IEEH K Sbjct: 371 DKVRILRIAHLCKADIASNVVYEFPELQGTMGRIYALKDGEDYKVAIGIEEHYK------ 424 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL- 525 +VP + V++AD++DT++ + + P+GSKDP+ LR+ T I II++ +I L Sbjct: 425 DVPESLTGAVVAIADRIDTIVGNFLVGNIPTGSKDPFGLRKKTDTIFEIIVKYSFNIDLE 484 Query: 526 -------SQFIED--QNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 S F +D L+ FF R +L+ +++ R+D+ A+ R Sbjct: 485 NLSKFAASLFSKDIPNELVEFFETRYELF--NQNTRYDIARAVKR 527 >gi|157737475|ref|YP_001490158.1| glycyl-tRNA synthetase subunit beta [Arcobacter butzleri RM4018] gi|157699329|gb|ABV67489.1| glycyl-tRNA synthetase, beta chain [Arcobacter butzleri RM4018] Length = 671 Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 187/667 (28%), Positives = 335/667 (50%), Gaps = 80/667 (11%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQI------ 99 ++TP RL L+ + + E+ G + K DG + + I Sbjct: 46 FYTPRRLVLWHREFQVKQEDSTIEQFGAPIKIAYK--DGVPTGAAISFAAKLGIDVSVLE 103 Query: 100 KKDPKKGDVYL----AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 KKD KG+V + + K L+ +++ V + + KSMRW++ S+ Sbjct: 104 KKDLGKGEVLYFKQEVIGSESKTLLNEMINEFVA----SLNFGKSMRWASRTD-----SF 154 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA 215 IRP++S+ +L E+I+D +L + N ++ HR + P Y L+++ Sbjct: 155 IRPIRSLSVLL-----GEEIVDAELFGVESSNFSFAHRMVSYEPFTYSFAGDYFCKLDKS 209 Query: 216 MVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLP 275 V+L P+ RR IL + +++ D +LLEE++ + E+ +G FD+++L LP Sbjct: 210 GVILYPDERRKIILEQMKNIEQRHNIKIEIDTELLEEVVAITEYPTALIGKFDEEFLELP 269 Query: 276 EELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALH 335 EE+I ++K NQ+ F ++G L N FI+VSN + +D G I+QGN +V+ RL DA+ Sbjct: 270 EEVIVTSMKENQRYFAV-YKDGNLTNNFIVVSNAKTNDFGY-IIQGNEKVLRPRLADAMF 327 Query: 336 FWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV 395 F+K D N L LK +VF +G+ ++ R Sbjct: 328 FYKNDIKN-----GLSNEGLK-------------------KLVFVEGLGSMYDKCEREAK 363 Query: 396 LGKKIAQLIDA-DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 + +A + + L+ +A++LSKADL +E+V EF ELQG +G YA + E+ A Sbjct: 364 IASYLANTFEVKEKELIQKAVMLSKADLMSEMVYEFTELQGLMGYYYAKIAKEDNLVSLA 423 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 ++E P G +P+N S V+L++KLD L+ +++ + P+GSKDP+ LRRA GI++ Sbjct: 424 LKEQYLPTGEDSELPSNVFSSIVALSNKLDNLMALFSVGKIPTGSKDPFGLRRAAAGIVK 483 Query: 515 IILENKIDIPLSQFIEDQN----------LILFFHDRL-KLYLHDRDIRHDLIEAILRPE 563 I +E+K+ I LS+ I++ + LI FF++RL K++ ++ +++A+L Sbjct: 484 IAMEHKLPIDLSKIIDELSTNYKNLDKKVLIEFFNERLFKIF----EVNPTVLKAVLASG 539 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE- 622 ++ I + LN S + ++ + KR+ I+ K+ +++ ++ L E Sbjct: 540 ETDIYKISQKLCALNPIVQSDNFKDYVATFKRVANII-----KDVDVNSKLLIDEKLFED 594 Query: 623 -AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 EK L+A ++ +S +K Y + + L ++ ++ FFD V VN ++ +++ NR Sbjct: 595 KEEKELFAKFNEV-----QSKTYKTYDEELEALFALKPELDNFFDNVFVNHENEKIKINR 649 Query: 682 LSLLQYI 688 +L+ I Sbjct: 650 KNLVGVI 656 >gi|208434873|ref|YP_002266539.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori G27] gi|238064852|sp|B5Z7X4|SYGB_HELPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|208432802|gb|ACI27673.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori G27] Length = 701 Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 218/739 (29%), Positives = 356/739 (48%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IHE-KEPTKDLIMPIVLEFLEDLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR + I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKVHRQESFDFIEVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETEHHISIEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 T ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 ATFCQKSQEESPTLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 349 ---------------LKKPLDN--APLE--SVVFVQGLGTLKDKMERESIIAQYLTQKYA 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 PSLNMPLEKALELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSLKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 450 QYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIA 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLEFDLKADLKSLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L SA F+ LA I + +N S E S Sbjct: 570 VKIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSISLFKESQ 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + T E +D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFNAIKTSAFEGLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWSVYQSFLEIGDIKEIA 700 >gi|119509794|ref|ZP_01628938.1| Glycyl and Arginyl tRNA synthetase [Nodularia spumigena CCY9414] gi|119465529|gb|EAW46422.1| Glycyl and Arginyl tRNA synthetase [Nodularia spumigena CCY9414] Length = 716 Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 210/752 (27%), Positives = 344/752 (45%), Gaps = 89/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + L + + Y TP RL + + GL Sbjct: 1 MTAFLLEVGTEELPASFLSDAILQWRSRIPQSLAANSLSSAAVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A K A GF + G+ I+ +I+ +KGD Sbjct: 61 SQQPDREEEIKGPPAQAAFKNGQPTPAATGFAKKQGVD-ITTLEIRPT-EKGDFVFVKKS 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L ++P I + + MRW S RP++ ++ +L + Sbjct: 119 IPGRPVAEILTELIPQWISGLEGKRLMRWGNGEMKFS-----RPIRWLVALL-----DDT 168 Query: 175 IIDLDL----KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ ++L K I ITYGHR P + + Y+ L A V+++PE R N I Sbjct: 169 VLPIELVNGSKTITSDRITYGHRVLHPATVTISEATDYVNTLRNAFVIVEPEARANIIQR 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + A G + DLL+E+ LVE+ +G F+ ++L LP E+I + T+Q+ F Sbjct: 229 EVEAAAEKAGGSTIFYPDLLKEVTNLVEYPSAVVGKFEPEFLELPTEVITEVMVTHQRYF 288 Query: 291 ----VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 T+E +L N FI VSN + I GN RV+ ARL D F+K Sbjct: 289 PVFKAAETKE-LLPN-FITVSNGDPTKADI-IAIGNERVIRARLADGKFFYK-------- 337 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 DL+KPL + +L+ V F ++G+ ++V RI + I++ ++ Sbjct: 338 ------------ADLAKPLVSYLPQLET--VTFQEELGSVRDKVDRIVTIADYISRQLEL 383 Query: 407 DV---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 + +RA +L KADL +++V EFPELQG +G++YA+ E+ AI +H P G Sbjct: 384 EPNKREKTERAALLCKADLVSQMVYEFPELQGIMGEKYALASGEDAEVASAIVQHYLPTG 443 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P V LAD+LDTL++ + + P+GS DP+ALRRA ++ I + I Sbjct: 444 AGDILPETLTGQIVGLADRLDTLVSIFGLGLIPTGSSDPFALRRAANAVVNITWFANLPI 503 Query: 524 PLSQFI-------------EDQNLIL----FFHDRLKLYLHD-RDIRHDLIEAILRPEND 565 L + + E LI FF R++ L D + I +DL+ A+L END Sbjct: 504 NLEKLLTQIATDFAAKYNKEQDKLIAALQEFFLQRIRTLLQDEKQIDYDLVNAVLG-END 562 Query: 566 ---------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA---IEEKKNREISLE 613 +LL + D +L + +K + R ++ A ++ ++ SL Sbjct: 563 REYTERALQDLLDVRDRALYLQQIRKDGTLDKIYETVNRSTRLAAQGDLDFQQLEPTSL- 621 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLV 670 I P+ +E+ Y + + Q + + + Y + L I + FF D VLV Sbjct: 622 IQPELFQKSSEQAFYNALLELVPQTQAAKETRNYQLLIATLEKIAPTVASFFDGEDSVLV 681 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + +++ NRL LL ++N ++ + IV Sbjct: 682 MDPNPDIKRNRLHLLGLLRNHARVLADFGAIV 713 >gi|145628143|ref|ZP_01783944.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] gi|144979918|gb|EDJ89577.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] Length = 534 Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 173/562 (30%), Positives = 278/562 (49%), Gaps = 52/562 (9%) Query: 155 WIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-E 213 +IRP+ ++ +L +++I+ ++ + GHRF ++Q D Y + L E Sbjct: 3 FIRPVHTVTMLL-----GDELIEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLCE 57 Query: 214 EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLC 273 + V+ D R+ IL + A+A+G ++ LLEE+ LVE+ V F++++L Sbjct: 58 KGSVVADFNERKAEILAKSQAKATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLA 117 Query: 274 LPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDA 333 +P E + T+K +QK F ++G L FI VSNI D AI++GN +VV RL DA Sbjct: 118 VPAEALVYTMKGDQKYFPIYDKDGRLLPHFIFVSNINPEDP-TAIIEGNEKVVRPRLTDA 176 Query: 334 LHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI 393 F+K D L + L R+ RL+ V+F K+GT ++ RI Sbjct: 177 EFFFKTD--------------------LKQKLVDRLPRLET--VLFQQKLGTLKDKTDRI 214 Query: 394 RVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD 453 L +IA+ I AD A RA +LSK DL T +V EF + QG +G YA E+ Sbjct: 215 EQLAGEIAKQIGADEAKAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAV 274 Query: 454 AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 A+ E PR + +P + ++ V+LADK DTL + I + P GS DP+ALRRA LG + Sbjct: 275 ALNEQYMPRFAGDELPKSLVASAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGAL 334 Query: 514 RIILENKIDIPLSQFIE-----------DQNLIL----FFHDRLKLYLHDRDIRHDLIEA 558 RII+E + + L ++ +QN++ F R + + D I D+I+A Sbjct: 335 RIIVEKNLPLDLEDLVKKSAALFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQA 394 Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISP 616 +L ++ ++ F + E + KR+ ILA + EI+L + P Sbjct: 395 VLARRPTRPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEP 454 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 AEK L + T +Q + Y + D L ++ P++ FFD V+VN +D Sbjct: 455 ------AEKALAEAVLALRTEVQPLIAQGDYTTVLDKLANLRMPVDSFFDNVMVNAEDPA 508 Query: 677 VRDNRLSLLQYIKNIILIVINV 698 +R NRL++L ++ + L V ++ Sbjct: 509 LRQNRLAILNTLQGLFLQVADI 530 >gi|315637198|ref|ZP_07892419.1| glycyl-tRNA synthetase beta subunit [Arcobacter butzleri JV22] gi|315478504|gb|EFU69216.1| glycyl-tRNA synthetase beta subunit [Arcobacter butzleri JV22] Length = 671 Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 187/667 (28%), Positives = 334/667 (50%), Gaps = 80/667 (11%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQI------ 99 ++TP RL L+ + + E+ G + K DG + + + Sbjct: 46 FYTPRRLVLWHREFQVKQEDSTIEQFGAPIKIAYK--DGVPTGAAISFATKLGVDVSVLE 103 Query: 100 KKDPKKGDVYL----AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 KKD KG+V + + K L+ +++ V + + KSMRW++ S+ Sbjct: 104 KKDLGKGEVLYFKQEVIGSESKTLLNEMINEFVA----SLNFGKSMRWASRTD-----SF 154 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA 215 IRP++S+ +L E I+D +L + N ++ HR + P Y L+++ Sbjct: 155 IRPIRSLSVLLGDE-----IVDAELFGVKSSNFSFAHRMVSYEPFTYSFAGDYFCKLDKS 209 Query: 216 MVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLP 275 V+L P+ RR IL + +++ D +LLEE++ + E+ +G FD+++L LP Sbjct: 210 GVILYPDERRKIILEQMKNIEQRHNIKIEIDTELLEEVVAITEYPTALIGKFDEEFLELP 269 Query: 276 EELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALH 335 EE+I ++K NQ+ F ++G L N FI+VSN + +D G I+QGN +V+ RL DA+ Sbjct: 270 EEVIVTSMKENQRYFAVY-KDGNLTNNFIVVSNAKTNDFGY-IIQGNEKVLRPRLADAMF 327 Query: 336 FWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV 395 F+K D N L LK +VF +G+ ++ R Sbjct: 328 FYKNDIKN-----GLSNEGLK-------------------KLVFVEGLGSMYDKCEREAK 363 Query: 396 LGKKIAQLIDA-DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 + +A + + L+ RA++LSKADL +E+V EF ELQG +G YA + E+ A Sbjct: 364 IASYLANTFEVKEKELIQRAVMLSKADLMSEMVYEFTELQGLMGYYYAKIAKEDNLVSLA 423 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 ++E P G +P+N S V+L++KLD L+ +++ + P+GSKDP+ LRRA GI++ Sbjct: 424 LKEQYLPTGEDSELPSNVFSSIVALSNKLDNLMALFSVGKIPTGSKDPFGLRRAAAGIVK 483 Query: 515 IILENKIDIPLSQFIEDQN----------LILFFHDRL-KLYLHDRDIRHDLIEAILRPE 563 I +E+K+ I LS+ I++ + LI FF++RL K++ ++ +++A+L Sbjct: 484 IAMEHKLPIDLSKIIDELSTNYKNLDKKVLIEFFNERLFKIF----EVNPTVLKAVLASG 539 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE- 622 ++ I + LN S + ++ + KR+ I+ K+ +++ ++ L E Sbjct: 540 ETDIYKISQKLCALNPIVQSDNFKDYVATFKRVANII-----KDVDVNSKLLIDEKLFED 594 Query: 623 -AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 EK L+A ++ +S +K Y + + L ++ ++ FFD V VN ++ +++ NR Sbjct: 595 KEEKELFAKFNEV-----QSKTYKTYDEELEALFALKPELDNFFDNVFVNHENEKIKINR 649 Query: 682 LSLLQYI 688 +L+ I Sbjct: 650 KNLVGVI 656 >gi|145640587|ref|ZP_01796170.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae R3021] gi|145274513|gb|EDK14376.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.4-21] Length = 541 Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 175/576 (30%), Positives = 281/576 (48%), Gaps = 57/576 (9%) Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 MRW+ +IRP+ ++ +L +++I+ ++ + GHRF Sbjct: 1 MRWAD-----KTVQFIRPVHTVTMLL-----GDELIEGEILGVASARTIRGHRFLGEKEF 50 Query: 201 KVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEW 259 ++Q D Y + L E+ V+ D R+ IL + A+A+G ++ LLEE+ LVE+ Sbjct: 51 EIQHADQYPQLLREKGSVVADFNERKAEILAKSQAKATALGGVADIEESLLEEVTSLVEY 110 Query: 260 VQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIV 319 V F++++L +P E + T+K +QK F ++G L FI VSNI D AI+ Sbjct: 111 PNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYDKDGKLLPHFIFVSNINPEDP-TAII 169 Query: 320 QGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVF 379 +GN +VV RL DA F+K DL + L R+ RL+ V+F Sbjct: 170 EGNEKVVRPRLTDAEFFFK--------------------TDLKQKLVDRLLRLET--VLF 207 Query: 380 HAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGK 439 ++GT ++ RI L +IA+ I AD A RA +LSK DL T +V EF + QG +G Sbjct: 208 QQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRAGLLSKCDLMTNMVFEFTDTQGVMGM 267 Query: 440 EYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGS 499 YA E+ A+ E PR + +P + ++ V+LADK DTL + I + P GS Sbjct: 268 HYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVASAVALADKFDTLTGIFGIGQAPKGS 327 Query: 500 KDPYALRRATLGIIRIILENKIDIPLSQFIE-----------DQNLIL----FFHDRLKL 544 DP+ALRRA LG +RII+E + + L ++ +QN++ F R + Sbjct: 328 ADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAALFGDKLTNQNVVADVVDFMLGRFRA 387 Query: 545 YLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 + D I D+I+A+L ++ ++ F + E + KR+ ILA Sbjct: 388 WYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKAG 447 Query: 605 KKNREISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EI+L + P AEK L + T +Q + Y + D L ++ P++ Sbjct: 448 AAIGEINLTACVEP------AEKALAEAVLALRTEVQPLIAQGDYTTVLDKLANLRAPVD 501 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 502 NFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADI 537 >gi|121609122|ref|YP_996929.1| glycine--tRNA ligase [Verminephrobacter eiseniae EF01-2] gi|121553762|gb|ABM57911.1| Glycine--tRNA ligase [Verminephrobacter eiseniae EF01-2] Length = 718 Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 184/619 (29%), Positives = 302/619 (48%), Gaps = 65/619 (10%) Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWS-TTHSPISAFS---WIRPLKSILCILVAEDA 171 P + L+ + AI K+P PK M + T + +S ++RP + ++ + Sbjct: 132 PGATLAAGLQQALDEAIAKLPIPKVMSYQLETDCALPGWSSVNFVRPAQGLVAL-----H 186 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRRNAIL 229 ++ + + GN T GHRF A P+ + D Y L + V+ RR I Sbjct: 187 GSTVVPVKALGLTAGNCTQGHRFEAVVSPVLLSDADGYAATLRSDGAVIASFAERRAEIA 246 Query: 230 NDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 + A+++G + ++ED+ LL+E+ GLVE +V + F+ ++L +P+E + LT+K +Q Sbjct: 247 HQLAAAAASLGRAVRVIEDQALLDEVTGLVERPRVLVCEFESRFLDIPQECLILTMKAHQ 306 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F G L + F++VSNI D ++ GN RVV RL DA F Sbjct: 307 KYFPLLDAAGRLTHQFLVVSNISPEDP-HWVIDGNQRVVRPRLADAQFF----------- 354 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 F+ D KPL AR+D L VV+H ++GTQ ERV R+R + IA+ + Sbjct: 355 ---------FDQDRRKPL---AARVDALCKVVYHHQLGTQAERVQRVRAIAALIARTMAE 402 Query: 407 DVA----------LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 A D+A +L+KADL T +V EFPELQG +G+ YA+ DAIE Sbjct: 403 TTAGPWADAALAQQADQAALLAKADLVTGMVGEFPELQGTMGRYYALNDGLGEVIADAIE 462 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 +H KPR +++P N++ + ++LADKL+TL+ + P+G +DP+ALRR LG+IR++ Sbjct: 463 DHYKPRFAGDSLPRNRVGVVLALADKLETLVGMFGTGNLPTGERDPFALRRHALGLIRML 522 Query: 517 LENKIDIPLSQFIED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +E ++ + L + L F ++RL L ++ ++A+L Sbjct: 523 VEKEVPLELHALLAGAWSVFGDKIGQDLSALTDFIYERLAGSLREQGYGAREVDAVLAQR 582 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + + + F + + + KR+ IL KK + ++P L +A Sbjct: 583 PQRLALVEKRLAAVRAFAALPESPALAAANKRVANIL----KKADAVDPHVNPGLLREQA 638 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E+ LYA + F D Y L + P++ FFD VLVNV+ ++R NRL Sbjct: 639 EQDLYAALQRFVPEADAQFDAGDYSLSLQTLAVLRAPVDAFFDDVLVNVEQMDLRLNRLG 698 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ + + V ++ ++ Sbjct: 699 LLKSLHQAMNRVADLSRLA 717 >gi|113477880|ref|YP_723941.1| glycyl-tRNA synthetase subunit beta [Trichodesmium erythraeum IMS101] gi|122964408|sp|Q10WA6|SYGB_TRIEI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|110168928|gb|ABG53468.1| Glycine--tRNA ligase [Trichodesmium erythraeum IMS101] Length = 719 Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 204/712 (28%), Positives = 334/712 (46%), Gaps = 87/712 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA ++A + ++ LKE + ++ Y TP RL + + L Sbjct: 5 FLLEIGTEELPANFVYEAIQQWQELIPMTLKEAFLTNDSVNVYATPRRLAVVIDALPTKQ 64 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P++ EE GP + G KA +GF + G+Q ++D QI +KGD + Sbjct: 65 PDREEEIKGPPAKAAFKDGKPTKAAEGFSKKQGVQ-LNDLQICTT-EKGDFVFVNKKIQG 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L ++P I K+ + MRW+ + RP++ ++ +L D + I+ Sbjct: 123 KPTAAILTELIPKWIDKLEGKRFMRWADGE-----LKFPRPIRWLVALL---DDEILPIN 174 Query: 178 LD--LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 LD ++I +YGHR P I++ +Y+ L++A + +D + R++ I Sbjct: 175 LDNGSQKITSDRFSYGHRVLHPKLIEISQAKNYVEVLKKAYIEVDYKQRKSKIEQQIKTA 234 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF----V 291 A + + ++LL E+ LVEW V +G FD+++L LP E+ ++T+Q+ F Sbjct: 235 AEEIKGKAEISEELLAEVTNLVEWPTVVIGKFDEEFLILPGEVTTTVMETHQRYFPVFKS 294 Query: 292 TRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 T+T ++ L FI +SN + I GN RV+ ARL D F+K D Sbjct: 295 TKTFKDMELLPYFITISN-GDPEKSEIIAIGNERVIKARLADGQFFYKTD---------- 343 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDAD 407 L+KPL+ + L+ V F AK+G+ E+V RI + K IA Q+ + Sbjct: 344 ----------LAKPLESYLPELET--VTFQAKLGSMREKVKRIVSIAKLIAGQLQITQEE 391 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 ++RA +L KADL T++V EFPELQG +G++YA E + AI EH PRG + Sbjct: 392 SKNIERAALLCKADLVTQMVYEFPELQGVMGEKYARAAGETEAVATAIFEHYLPRGAGDI 451 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P +SLAD+LDTL++ + + P+GS DP+ALRRA G++ I + + L Q Sbjct: 452 LPKTISGQVISLADRLDTLVSIFGLGMLPTGSADPFALRRAANGVVNISWSANLPLNLHQ 511 Query: 528 FIED-----------------QNLILFFHDRLK-LYLHDRDIRHDLIEAILRPENDNLLT 569 +E+ L F R+K + L +++I +DL+ A+L DN Sbjct: 512 LLEEIATNFFKTYSQTNSDLLAQLSNFLLQRIKTILLEEKNIDYDLVNAVL---GDNDAE 568 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE---------------I 614 + + L + FL + ++ + I E NR L I Sbjct: 569 YKE--RGLKDLLDVRNRAIFLQNIRQNGMLGKIYETINRSTRLAAQGELDKIQLKPLKVI 626 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + E+E Y + + + S + Y Q+ D L I + FFD Sbjct: 627 DSKLFKSESELAFYNALVELVPQTEISQKTRNYQQLVDALLKIAPTVSNFFD 678 >gi|224369902|ref|YP_002604066.1| GlyS [Desulfobacterium autotrophicum HRM2] gi|259511921|sp|C0QJ89|SYGB_DESAH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|223692619|gb|ACN15902.1| GlyS [Desulfobacterium autotrophicum HRM2] Length = 689 Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 195/725 (26%), Positives = 335/725 (46%), Gaps = 60/725 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EEIPA A + L + + + TP RL L ++ + Sbjct: 1 MNNLLIEIGAEEIPAGYILPALTSFCDRVTAALTGARINHGKTAVFGTPRRLALMVEDVQ 60 Query: 61 PHSPEKIEERLGP--RVG---AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + +GP R+G GK + G + + + I D KG AV+ + Sbjct: 61 ACQAPQKTTLMGPPQRIGFDNEGKPTLAGVKFAEKAGIVPEEIIITDNGKGPYLSAVIEE 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 L E +L+ ++P IQ +P+PKSM W ++ RP+ S+ +L + + Sbjct: 121 SCLLTEAILEGVLPELIQAIPFPKSMHWGDLD-----VTFARPIVSLTALL-----GKTV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + I + +GH F AP +++S D Y+ L +A V+ D RR + Sbjct: 171 LNFKIGNIASASFVFGHSFMAPERFELESADAYLDTLRKAGVVADIGERRTILKESIKAA 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++ED++L++ + LVE+ +G FD+ +L LP+E++ ++ +QK F Sbjct: 231 ADKACATIIEDEELVDIVNNLVEYPYPVVGHFDEVFLELPDEVLITAMREHQKYFALADT 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L CFI V+N +A D + +G+ +V+ ARL DA F+ Sbjct: 291 AGKLMPCFIAVNNTRARDMDV-VAKGHGKVIRARLADAQFFY------------------ 331 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VD 412 ++DL LD + +L V F A +G+ E+ R+ VL + +A L++AD L + Sbjct: 332 --HVDLESTLDDFVEKLKA--VTFQASLGSMYEKTGRLVVLVEFLAGLVNADQELQKKLM 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL +++V EF +LQG IG+ YA E+ AIEEH +P ++P Sbjct: 388 RAARLSKADLVSQMVIEFTKLQGIIGRVYAQKGGEDPEVAMAIEEHYRPVYSGGDLPRTD 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------- 525 +++ADK DTL ++ N P+G+ DPYALRR ++GI++I+LE D L Sbjct: 448 TGKILAIADKTDTLCGCFSANLIPTGASDPYALRRQSIGILQIMLEAGFDFSLRALVRRG 507 Query: 526 -SQFIEDQN--------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q+ D + ++ F R+ L D+ + + A L N+ IK Sbjct: 508 VAQYQTDPDKKNEISTQILEFLKGRMTNMLVDQGFSREAVNAALSVSFYNVPDAFLRIKA 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L+ E + KR+ IL +K + ++ +AEK L+ + Sbjct: 568 LDILRQEPDFEPLSTAFKRVVNIL---KKAGGDAKTRVNVNLFNCDAEKALHQACGEVTE 624 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y + ++ ++ F+ V+V DD +R NR++LL + + + Sbjct: 625 RVDTCIKAGDYGAALKEISTLRPHVDRLFEDVMVMDDDVALRINRMALLSSVAALFRNIA 684 Query: 697 NVQKI 701 + +I Sbjct: 685 DFSQI 689 >gi|16331421|ref|NP_442149.1| glycyl-tRNA synthetase subunit beta [Synechocystis sp. PCC 6803] gi|2500995|sp|Q55690|SYGB_SYNY3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|1001591|dbj|BAA10219.1| glycyl-tRNA synthetase beta chain [Synechocystis sp. PCC 6803] Length = 722 Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 203/745 (27%), Positives = 344/745 (46%), Gaps = 77/745 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL EI +EE+PA A ++ L E + +++ Y TP RL + +KGL Sbjct: 6 FLFEIGTEELPADFVRSAITQWQGLIPPGLAAEFLQPESVEIYGTPRRLAVLIKGLPECQ 65 Query: 64 PEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P+++EE GP A K A GF + G+ D +I+ PK GD + Sbjct: 66 PDRLEEIKGPPASAAFKDGQPTPAALGFAKKQGVNP-EDFEIRSTPK-GDFIFVNKQLQG 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + D+L + ++ + + MRW + + RP++ ++C+L + ID Sbjct: 124 QASRDLLPKLALSWLKALDGRRFMRWGD-----GDWRFPRPIRWLVCLL-DDQVLPLQID 177 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + ++ GHR P + ++ +Y+ L+ A V++DP+ RR I A+ Sbjct: 178 NGSTTLVGDRLSRGHRILHPADVSLEHGQNYLAQLKTAGVVVDPQERRAMIEQQITTQAA 237 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + E + +DLL+E+ LVE+ +G FD+++L LP E+ + T+Q+ F ++G Sbjct: 238 TLEGEAIIYEDLLDEVEQLVEYPTAVLGKFDQEFLSLPREVTTTVMVTHQRYFPVVDKDG 297 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N S G I GN RV+ ARL DA F++ D ++ Sbjct: 298 RLLPHFITIANGDPSKGDI-IAAGNGRVIRARLADAKFFYQADCDD-------------- 342 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRA 414 LD + +L+ V F ++GT ++V RI + IA + + +D Sbjct: 343 ------SLDSYLPQLET--VTFQEELGTMRDKVDRIMEMAAAIADQLGVTEQQRGEIDST 394 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA++ E+ + I EH PR +++P Sbjct: 395 AMLCKADLVTQMVYEFPELQGIMGEKYALVSGESAAVAQGIVEHYLPRHQDDDLPQGLPG 454 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V +AD+LDTL++ + + P+GS DP+ALRRA +I + ++I L + + Sbjct: 455 QVVGMADRLDTLVSIFGLGLLPTGSSDPFALRRAANAVINVAWAASLEINLLELLTQGCR 514 Query: 532 -------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPE-----------NDN 566 Q L FF RL+ L D + I +DL+ A+L +D Sbjct: 515 DFVTSHPDKTSPLQALKTFFLQRLQTLLQDEQGIDYDLVNAVLGNGETNCDEAQSRLHDR 574 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ------YLL 620 LL + +K ++ + L + A K + ++ P+ L+ Sbjct: 575 LLADLQDVKERAQYLQELRDNGHLDAIYPTVNRSAKLASKGTLPTDQLDPRPVIQAPQLV 634 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREV 677 ++EK +Y + E + + Y + + LH + + FF D VLV ++ E+ Sbjct: 635 QDSEKAVYQALLAIYPKAVEVQESRDYETLVNALHELAPTVAEFFDGPDSVLVMAENDEL 694 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R NRL+LL I+N LI+ + IV Sbjct: 695 RQNRLNLLGLIRNYALILGDFGAIV 719 >gi|308063798|gb|ADO05685.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Sat464] Length = 700 Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 216/738 (29%), Positives = 355/738 (48%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R+ IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKRKAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ +L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AVFNQKSQESPILHNGFIVVSNAISKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAS 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERGIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L SA F+ LA I + +N S E E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFFISLFKESQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|315638432|ref|ZP_07893609.1| glycyl-tRNA synthetase beta subunit [Campylobacter upsaliensis JV21] gi|315481423|gb|EFU72050.1| glycyl-tRNA synthetase beta subunit [Campylobacter upsaliensis JV21] Length = 662 Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 209/721 (28%), Positives = 350/721 (48%), Gaps = 81/721 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ LLKE + Y+TP RL + Sbjct: 1 MKELLIEILTEELPAIPFLKELPNIKGKWEKLLKEYR-LEAEFDFYYTPRRLVFF----H 55 Query: 61 PHSPEKIEERLGPRVGAGKKAI--DGFLRSTGLQ-----TISDCQIKKDPKKGDVYLAVL 113 PH K E L +GA K DG L GL I + QI KG VL Sbjct: 56 PHFKTKQENSLVEFIGAPKNVAYKDGKLSQAGLSFIQKVGIDETQICFREIKGK---EVL 112 Query: 114 RKPKRL----IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 K L ++L ++ ++ + + KSMRW F +IR +++I+C+L Sbjct: 113 YYQKELEGKESSEILGEMIENFLKSLHFGKSMRWGAYQ-----FEFIRAIRNIVCVL--- 164 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 E ++ + T+ HR + ++ Y LEE V+LDPE R+ I+ Sbjct: 165 --GEDLVKFQSYGVQSSKQTFVHRSVSYEAFAFKNAKEYFELLEENFVILDPEKRKEKII 222 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + + L + +D +LLEE+I + E+ +GSF+ ++L +P E+I +++ NQ+ Sbjct: 223 ESFKLIETKENLNIAQDDELLEEVIAITEYPNALLGSFESEFLEIPSEVIITSMRENQRY 282 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F T +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F+K Sbjct: 283 FATFDEKG-LSNHFIVVSNAVCKD-YSKIIHGNERVLRARLSDAMFFYKN---------- 330 Query: 350 LKESALKFNLDLSKPLD-QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 DL K L+ ++++++ LD +GT ++V R + L + + +D D Sbjct: 331 ----------DLQKGLEPEKLSKMLYLD-----SLGTVMDKVEREKALALLLCKFLDNDK 375 Query: 409 A-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + +A+ SKADL T++V EFP LQG +G YA + AI+E P Sbjct: 376 QEAILQALHFSKADLATQMVYEFPNLQGIMGSYYAEKMGLSYEISLAIKEQYLPNQSA-- 433 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P+++ S V+LA K DTL++ ++I + PSG+KDPYALRRA GI++I+L L+ Sbjct: 434 LPSSEFSSIVALAYKFDTLLSLFSIGKIPSGTKDPYALRRAANGILKILLHLGKKFDLNA 493 Query: 528 FIEDQNLILFFHDRLKLY--LHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F+++ + D LY + +R + I+A+L +N +L+ I +K L E Sbjct: 494 FLKEASKTYKSFDLNSLYDFILERIYPFYEANPSFIKAVLSTKNSDLIHIDSAVKALIEL 553 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ I KN + I+ EAEK+LY +E Sbjct: 554 SKKTNFNENFSTFKRLANIAT----KNENL---INESLFENEAEKKLYLA-------FKE 599 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 S+ + Q + L ++ I+ FF+ V++N ++ ++++NR +L+ I N L + ++++ Sbjct: 600 SLKVQNLKQKLESLFALKPFIDEFFENVMINSENEKLKNNRQALIFAIYNEFLKIADIKE 659 Query: 701 I 701 + Sbjct: 660 L 660 >gi|119897077|ref|YP_932290.1| glycyl-tRNA synthetase subunit beta [Azoarcus sp. BH72] gi|229470694|sp|A1K3J8|SYGB_AZOSB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119669490|emb|CAL93403.1| Glycyl-tRNA synthetase, beta chain [Azoarcus sp. BH72] Length = 695 Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 185/585 (31%), Positives = 291/585 (49%), Gaps = 58/585 (9%) Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +VL IV A++ +P PK MRW + +++RP+ ++ + AE ++ Sbjct: 128 PGARLAEVLAAIVHDAVKALPIPKVMRWGDGDA-----TFVRPVHKLVMLHGAEVVPGRV 182 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 +DLD G T GHRF + I + + D Y L E V+ D RR I Sbjct: 183 LDLD-----AGRSTRGHRFMSRGEIDIATADAYEPTLLAEGKVVPDFAERRADIERQLLA 237 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G +L + DLL+E+ LVE V++G F+ ++L +P+E + LT++ NQK F Sbjct: 238 EAARLGAQLDDYTDLLDEVTALVEHPTVYVGEFEAEFLAVPQECLILTMRANQKYFPLFD 297 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N F++VSN++ D IV GN+RVV RL DA F++ D+ + Sbjct: 298 AAGKLQNRFLIVSNMRMEDP-VNIVTGNARVVRPRLSDARFFFETDKKH----------- 345 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 LD R+ RL +VV+H K+G+ ERV R+ L KIA + +D A RA Sbjct: 346 ---------KLDSRLPRL--ANVVYHNKLGSVLERVERLEALAGKIAARLGSDEAAARRA 394 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+KADL +E+V EFPELQG +G+ YA+ E DA++ H +PR + +P ++ Sbjct: 395 ARLAKADLVSEMVGEFPELQGIMGRYYALHDGEGAVVADAVQAHYQPRFAGDALPAGNVA 454 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP---------- 524 V+LADKLD L+ F+ I P+G KDP+ALRRA LG++RI++E + + Sbjct: 455 AAVALADKLDALVGFFGIGMVPTGDKDPFALRRAALGVLRILMEAPLPLDLAALVADAAA 514 Query: 525 ------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 L+ L+ F +RLK L + I+A+L + + + + Sbjct: 515 GFKPGLLTADGFQAQLLDFMRERLKNLLRESGGEVAAIDAVLALAPTRIDLVPAKLAAVE 574 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGT 636 F + + E + KRI IL E E P LL+ AEK L+ + + Sbjct: 575 AFRALPEAEALAAANKRIVNILKKAEGAPGE------PDVALLQEDAEKALFHRVIEIAP 628 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 ++ + ++ Y +L + ++ FFD V+V ++ R NR Sbjct: 629 LVKSHVANEDYTDALCVLAGLRAEVDAFFDGVMVMAEEPLTRQNR 673 >gi|253581996|ref|ZP_04859220.1| glycyl-tRNA synthetase subunit beta [Fusobacterium varium ATCC 27725] gi|251836345|gb|EES64882.1| glycyl-tRNA synthetase subunit beta [Fusobacterium varium ATCC 27725] Length = 690 Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 199/734 (27%), Positives = 358/734 (48%), Gaps = 87/734 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI EE+PAR ++A +DL L LK+E + ++ ++ Y TP RL L + L Sbjct: 4 LFEIGMEELPARFLNQALKDLKNNLETKLKDERISFKGIKTYGTPRRLVLEVCELGEQQE 63 Query: 65 EKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR--- 114 + +GP G +A GF +S G++ D +I PK G+ Y+A + Sbjct: 64 DLNIVNMGPAKNIAYGSNGEISRAGLGFAKSQGIEA-EDLEIISTPK-GE-YIAARKFMK 120 Query: 115 --KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K L+ ++LK++V ++ + KSM WS + RP++ L + E Sbjct: 121 GKETKELLPEILKSLVL----ELNFQKSMTWSDKK-----LRFARPIQWFLALCDNE--- 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ +++ + GN + GHRF +V ++D Y + E V++D E R+ I Sbjct: 169 --VVKFEIEGMESGNKSRGHRFFGKE-FEVNTIDEYFEKIRENNVIIDIEERKALIKKLI 225 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + + G +++ + +LL E+ L+E+ +GSF+ +L +P+E++ ++++ +Q+ F Sbjct: 226 NENCTNSGEQVLVEDELLAEVTNLIEYPCPIVGSFNSDFLEVPQEVLIISMEVHQRYFPI 285 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L F++V N + + +GN +V++ARL DA F++ D Sbjct: 286 LDSNGKLLPKFVVVRN--GVETSEQVRKGNEKVLSARLADARFFYQED------------ 331 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 L PL + +L VVF +GT ++ R + K + + D + Sbjct: 332 --------LKSPLADNVEKLKT--VVFQKDLGTIYSKIERATEIAKYLIDTLGYNDRKDS 381 Query: 410 LVDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 ++ R + L+KADL + ++ +EF +LQG +G +YA+ E I+EH PR +N Sbjct: 382 IL-RTVFLAKADLVSNMIGEKEFTKLQGFMGADYALKSGEGEKVSLGIKEHYYPRFQGDN 440 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +PT I ++D++DTL+ + + PSGSKDP+ALRRA LGI+ +IL ++++I L Sbjct: 441 LPTELEGIVAGISDRIDTLVGCFGVGVIPSGSKDPFALRRAALGIVNVILNSQLNISLKA 500 Query: 528 FIE--------------DQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E D+ +L FF R + D++ A+L ++DN + Sbjct: 501 LTEKALDALQGCGVLKRDRETVLAEVLEFFKQREMNIFTEMKFGKDIVTAVLNTDSDNAV 560 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKRL 627 ++ IK L F + E L KR+ I EK I Q L E E L Sbjct: 561 EALEKIKTLETFAKEEEFETLLPVLKRVGNISKDHEKG-------IINQDLFKEPVETEL 613 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y + + + +++++K Y + + S + I +FD+V+V D +V++NRLS L++ Sbjct: 614 YNFSLELNSKVIDALNNKNYDKYLQAIVSGKDIINKYFDEVMVMDKDEDVKNNRLSQLKF 673 Query: 688 IKNIILIVINVQKI 701 + ++ + + ++ +I Sbjct: 674 LADLFIKMADLNQI 687 >gi|269123853|ref|YP_003306430.1| glycyl-tRNA synthetase, beta subunit [Streptobacillus moniliformis DSM 12112] gi|268315179|gb|ACZ01553.1| glycyl-tRNA synthetase, beta subunit [Streptobacillus moniliformis DSM 12112] Length = 668 Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 208/715 (29%), Positives = 348/715 (48%), Gaps = 93/715 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL EI EE+P+R KA +DL I L E + + ++Y +P R+ +Y + ++ Sbjct: 3 FLFEIGVEELPSRYVDKACDDLLEIFKKELIEARIEFSGEKKYNSPRRIAIYFENIAKMQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E+++GP V G KA GFL S L T+SD +I+K K +Y+ K Sbjct: 63 KDLYEKKIGPSVQVAYKEGELTKAALGFLNSQNL-TLSDLKIEKTDKGEYIYV---EKNI 118 Query: 118 RLIED--VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + IE VL ++ +AI+ + + K+M+WS +F + RP+K I+ L E I Sbjct: 119 KGIESFKVLPELMEMAIKSLDFDKTMKWSD-----KSFRFARPIKWIVATLDDE-----I 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID + I NI+ G R + + Y L V++D RR IL+ ++ Sbjct: 169 IDFTFEGITASNISRGMRLFGNQEVLISDSSKYEDILLNEYVVVDTLKRREMILDSINKN 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G ++ +K LL+E++ LVE+ G F+K YL LPE++I +T++T+Q+ F + Sbjct: 229 CEKDGDRVIVNKYLLDEVVNLVEYPYAIKGEFNKDYLELPEDIITITMETHQRYFPVKNS 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N F+L+ N A + + +GN +V+ RL DA F+ D L Sbjct: 289 EGKLTNKFVLIRN--APEYSELVKKGNEKVIEPRLADAKFFFDED--------------L 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD--- 412 K N L+ + +L +V F +GT E++ R +KIA+ + + L + Sbjct: 333 KIN------LNDNVEKLK--NVTFQKDMGTIFEKMER----SQKIAKYLINKLNLENEED 380 Query: 413 --RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + I LSKADL + ++ +EF +LQG +G YA Q E I EH PR + + Sbjct: 381 ILKTIYLSKADLVSNVINEKEFTKLQGFMGSIYAEKQGEKPEISKGIFEHYLPRFQGDIL 440 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI----- 523 P S++DKLDTL+ +++N P+ SKDPYALRRAT G++ ++I Sbjct: 441 PETMEGTIASISDKLDTLVGTFSVNLIPTSSKDPYALRRATNGLLLTAFNKNLNIDYLDL 500 Query: 524 ---PLSQFIED---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 F ED +N++ F RL+ L D + ++ + +N+ +I+ Sbjct: 501 INKAFEIFSEDKKILNDNAKENILDFIKQRLEAILA-----IDFSKNLIAYQINNVTSIM 555 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D+ L + K E F + I ++ I ++E+ ++ E EK LY Sbjct: 556 DIKNRLIKLSELEKSENFEILINLIKRLKNI----SKEVVENVNINLFTNEEEKELY--- 608 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 ++ +S+ ++ I D+L + I FF++V++NV D +++NR++L+ Sbjct: 609 -----NLSQSLSGD-FNDI-DMLIDKKDIINRFFEKVIINVKDEVIKNNRIALIN 656 >gi|283850610|ref|ZP_06367897.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. FW1012B] gi|283573853|gb|EFC21826.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. FW1012B] Length = 697 Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 210/721 (29%), Positives = 335/721 (46%), Gaps = 72/721 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL EI EE+PAR A ++ + L + + + + TP RL + + L+ Sbjct: 1 MSHFLFEIGFEEMPARFLSGLASEVRTLFTDALAQAKLDASAVTAFATPRRLVVSIPELA 60 Query: 61 PHSPEKIEERLGP--RVG---AGKK--AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S + E GP RVG +G A GF + G + ++D + + K YLA+ Sbjct: 61 ADSRREEELVTGPPERVGFDASGNPTPAAVGFAKGQG-KDVADVFVMETGK--GRYLALN 117 Query: 114 RKPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L + A++K+ +PK MRW + F++ RP+ L +L Sbjct: 118 KTTGGEPAMALLPGMCLEAVKKLSFPKRMRWGSRD-----FAFGRPVHWFLALL-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY---IRDLEEAMVLLDPECRRNAIL 229 + ++ +L I G T GHR P P V + Y IRD + V+LD R + + Sbjct: 168 DAVVPFELDGIVSGRRTRGHRIMGPGPFDVAAAKDYFGIIRD--QGKVVLDARERESLVR 225 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A LA G V + LL E+ GL E V +G D K+L +P E++ +++T+QK Sbjct: 226 SQAETLAREAGGTAVINPALLAEVTGLTEHPVVLLGRLDPKFLDVPREVLITSMETHQKS 285 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L F+ + + G +V+ G RV+ ARLEDA FW+ Sbjct: 286 FAVEDGKGGLLPVFL--TTLGLVPGNVDLVRRGWQRVLTARLEDARFFWE---------- 333 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI-RVLGKKIAQLIDAD 407 DL+ L+ +L+ VVF A +G+ ++ R+ R+ G Q + Sbjct: 334 ----------ADLATDLETWQKKLE--SVVFLAGLGSMRDKARRLERLCGVVAEQAGKPE 381 Query: 408 VAL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V L +A L+K DL +++V EF ELQG +G Y + ++ + AI E P GP Sbjct: 382 VMLEASQAGGLAKVDLVSDMVGEFAELQGIMGGIYVRRKGQSKTVSRAIAEQYLPAGPDS 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 VP +SLADK DTL + ++ P+G+ DPYALRRA LGI RI++E+ + + L Sbjct: 442 PVPATLAGAVLSLADKADTLAGCFGLDMAPTGAADPYALRRAALGICRIVIEHGLRLNLM 501 Query: 527 QFIE-------------DQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++ D+ IL FF RLK Y R ++EA ++ Sbjct: 502 ELLQAALDGYGEVKFKVDRTHILARLLDFFGQRLKAYFTGRGFDTLVVEAAAGASFTDIA 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRL 627 + I L F + + +L+ KR I+ + + ++ + L +AEK L Sbjct: 562 ELAARIPALAAFAAKPDFGQAVLTFKRAANIIRKQGVGAGQPLTGLVKAALLEEQAEKDL 621 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 AV +D + Y + DLL+ + ++ FFD V+V DD +VR NRL+LL+ Sbjct: 622 AAVCADVFPRYDALFEAGDYAGVLDLLYELRPTVDAFFDNVMVMCDDMDVRLNRLNLLKS 681 Query: 688 I 688 + Sbjct: 682 L 682 >gi|258611682|ref|ZP_05711600.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL R2-503] gi|258605382|gb|EEW17990.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL R2-503] Length = 622 Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 184/642 (28%), Positives = 312/642 (48%), Gaps = 74/642 (11%) Query: 76 GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPV---AI 132 G KA GF +S Q ++ + KG Y+ + K +I + ++P + Sbjct: 18 GNWSKAALGFAKS---QKVAPEDLTFREIKGVEYIYI---KKEVIGEKTTALLPSLEKVV 71 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 + +P SM W + +IRP+K ++ + E+II ++ + N + GH Sbjct: 72 TSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----GEEIIPFEITGVSTSNTSRGH 121 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 RF Q D Y L E V+++ R+ AI+ L + ++ ED DLLEE Sbjct: 122 RFLGKTATINQPSD-YPNALLEQFVVVNASERKQAIVEQLRELETMENWQIREDDDLLEE 180 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + LVE+ V G+F+K+YL LPEE++ T+K +Q+ F ++EG L F+ V N Sbjct: 181 VTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPVFSQEGELLPHFVTVRN-GNH 239 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + + +GN +V+ ARL DA F++ D L +D+ +A+L Sbjct: 240 ENLDTVARGNEKVLRARLSDADFFYQED--------------------LKITIDEAVAKL 279 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLCTEIVRE 429 ++VFH K+GT E++ R++ + +A ++ D + R + K DL T IV E Sbjct: 280 Q--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQDIIRLTNIYKFDLVTNIVGE 337 Query: 430 FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINF 489 FPELQG +G++YA+LQ E + AI EH P ++P + +++ADKL+TLI F Sbjct: 338 FPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLPQTDLGSLIAIADKLETLIGF 397 Query: 490 WAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------------------ 531 + +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 398 FCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVVSRIVDMERAEGATELPSSDV 457 Query: 532 -QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 + + F +RL++ L IRHD+I+A++ + + + ++D + LN+ A E F Sbjct: 458 IKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQLIDRAQILNK---HADAEWFR 514 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + + + +++ I +K E +E+ P E E+ L+ + R Sbjct: 515 PTIEALTRVVNISKK--YEDGVEVDPSLFENEYEQALFDKLEKLKFDFAGLKIVDRLKAF 572 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 DL + I+ +FD LV D+ E+++NRL+LL + + I Sbjct: 573 ADLRTT----IDAYFDNTLVMTDNDELKNNRLALLFELASFI 610 >gi|126657519|ref|ZP_01728675.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. CCY0110] gi|126621223|gb|EAZ91936.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. CCY0110] Length = 711 Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 203/726 (27%), Positives = 336/726 (46%), Gaps = 70/726 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA +A I+ L+E + + Y TP RL + + L Sbjct: 3 FLLEVGTEELPADFIDEAIAQWKQIIPNSLEENFLTPDKVAVYGTPRRLAVLISELPEQQ 62 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP + G KA +GF R ++ I D I+ KGD + Sbjct: 63 KDRDEVIKGPPAKAAFKDGKPTKAAEGFARKQEVE-IKDLDIRP-TDKGDFIFIEKKIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +++L+ ++P I + + MRW + RP++ ++ + + +II+ Sbjct: 121 RQTKEILQALIPNWIDSLEGRRFMRWGNGE-----LRFSRPIRWLVALCDKQVLPIEIIN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I ++ GHR P + + Y+ L A V +DP+ R+ I D +A Sbjct: 176 GD-STITSDRLSRGHRILHPDTVSIAQASDYVETLRSAYVEVDPKQRQEIIEKDIETIAK 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + DLL E+I L+E+ G FD ++L LP E+I + +Q+ F + E Sbjct: 235 ELKGKADLPDDLLTEVINLIEYPTAIAGKFDPEFLNLPTEVITTVMVKHQRYFAVKKTEN 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N + I QGN RV+ ARL DA F + Sbjct: 295 ELLPNFITIANGDPNKKDI-IAQGNERVIRARLADAQFF--------------------Y 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVDRA 414 D +PLD + L+ +V F ++GT ++V RI + ++IA+ ++ D ++ Sbjct: 334 TADCDEPLDSYLPELE--NVTFQKELGTMRDKVDRIMDMAQQIAKQLEIDEKEQEEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA++ E+ I +H PRG + +P Sbjct: 392 ALLCKADLVTQMVYEFPELQGVMGQKYALVSGESEQVAQGIFDHYLPRGANDIMPKTLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------- 527 V +AD+LDTLI+ + + P+GS DP+ALRRA II + E K+ I LSQ Sbjct: 452 QVVGIADRLDTLISIFGLGMIPTGSGDPFALRRAANAIISVTWEAKLPINLSQLLIQGCE 511 Query: 528 -FIED--------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 F+ D + L F R++ L D +I +DL+ A+L + NLL Sbjct: 512 AFMADHADKDSPLEALQTFLIQRIQTLLQDELNIDYDLVNAVLGEADAEYTDRALQNLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRL 627 + D + L E ++ +K + R ++ A + E+ Q L E +E+ Sbjct: 572 VKDRAEFLQEIRNNEILDKIYETVNRSTRLAAKGDLNYTELDPSEVVQTELFEKSSEQEF 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREVRDNRLSL 684 Y + + ++ + Y + + L I + FFD VLV ++ +VR NRL+L Sbjct: 632 YNGLMALLSKTTQAQSQRNYQLLIEGLLDIVPKVSEFFDGENSVLVMDENPQVRQNRLNL 691 Query: 685 LQYIKN 690 L ++N Sbjct: 692 LGVLRN 697 >gi|308184750|ref|YP_003928883.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori SJM180] gi|308060670|gb|ADO02566.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori SJM180] Length = 700 Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 217/738 (29%), Positives = 351/738 (47%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKCALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V D GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLESLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AVFNQKSQESPTLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAS 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERGIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L SA F+ LA I + +N S E S E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSISLFKESQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSTFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDVEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|317182271|dbj|BAJ60055.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F57] Length = 700 Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 218/738 (29%), Positives = 358/738 (48%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFSKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW + S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKVHRQEGFDFIQVGSPKAYFEVLEKKHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VT---RTREGV-LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 +++E + L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFNQKSQESLTLHNGFIVVSNAISKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---- 402 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAS 389 Query: 403 ----LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMSLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L +++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L A F+ LA I + +N S E S E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFGA---FKRLANINKDRNPNESSEFSISLFKELQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|257469009|ref|ZP_05633103.1| glycyl-tRNA synthetase beta chain [Fusobacterium ulcerans ATCC 49185] gi|317063256|ref|ZP_07927741.1| glycyl-tRNA synthetase subunit beta [Fusobacterium ulcerans ATCC 49185] gi|313688932|gb|EFS25767.1| glycyl-tRNA synthetase subunit beta [Fusobacterium ulcerans ATCC 49185] Length = 690 Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 201/735 (27%), Positives = 362/735 (49%), Gaps = 89/735 (12%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI EE+PAR ++A +DL L LK+ + +++++ Y TP RL L + L Sbjct: 4 LFEIGMEELPARFLNQALKDLKNNLEAKLKDGRISFKDIKTYGTPRRLVLDVHELGEQQE 63 Query: 65 EKIEERLGP--RVGAGK-----KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR--- 114 + +GP V G +A GF +S G++ D +I PK G+ Y+A + Sbjct: 64 DLNIVNMGPAKNVAYGSNGEISRAGLGFAKSQGIEA-EDLEIVSTPK-GE-YIAARKFMK 120 Query: 115 --KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K L+ ++LK++V ++ + KSM WS + RP++ L + E Sbjct: 121 GKETKELLPEILKSLV----LELNFQKSMTWSDKK-----LRFARPVQWFLALCDNE--- 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ +++ + GN + GHRF +V ++D Y + E V++D E R+ I Sbjct: 169 --VVKFEIEGMESGNKSRGHRFFGKE-FEVNTIDEYFEKIRENNVIIDIEERKALIKKLI 225 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + + G +++ + +LL+E+ L+E+ +GSF+ +L +P+E++ ++++ +Q+ F Sbjct: 226 NENCTNSGEQVLVEDELLDEVTNLIEYPCPIVGSFNSDFLEVPQEVLIISMEVHQRYFPI 285 Query: 293 RTREGVLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L F++V N ++ S+ + +GN +V++ARL DA F++ D Sbjct: 286 LDSNGKLLPKFVVVRNGVETSE---QVRKGNEKVLSARLADARFFYQED----------- 331 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADV 408 L PL + +L VVF +GT ++ R + K + + D Sbjct: 332 ---------LKSPLADNIEKLKT--VVFQKDLGTIYSKIERATEIAKYLIDTLGYNDRKD 380 Query: 409 ALVDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +++ R ++L+KADL + ++ +EF +LQG +G +YA+ E I+EH PR + Sbjct: 381 SIL-RTVLLAKADLVSNMIGEKEFTKLQGFMGADYALKSGEGEKVSLGIKEHYYPRFQGD 439 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 N+PT I ++D+LDTL+ + + PSGSKDP+ALRRA LGI+ +IL + +DI L Sbjct: 440 NLPTELEGIVAGISDRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNVILNSGLDISLK 499 Query: 527 QFIE--------------DQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E D+ +L FF R + D++ A+L +DN Sbjct: 500 ALTEKALDALQGCGVLKRDRETVLAEVLEFFKQREMNIFTEMKYSKDIVTAVLNTNSDNA 559 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE-AEKR 626 + ++ IK L F E L KR+ I EK I Q L E E Sbjct: 560 VEALEKIKTLEAFAKEEAFETLLPVLKRVGNISKDHEKG-------IINQDLFKEPVETE 612 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY + + + +++++K Y++ + S + I +F++V+V D +V++NRLS L+ Sbjct: 613 LYNFSLELNSKVIDALNNKDYNRYLQAIVSGKDIINRYFNEVMVMDKDEDVKNNRLSQLK 672 Query: 687 YIKNIILIVINVQKI 701 ++ ++ + + ++ +I Sbjct: 673 FLADLFIKMADLNQI 687 >gi|82701684|ref|YP_411250.1| glycyl-tRNA synthetase, beta subunit [Nitrosospira multiformis ATCC 25196] gi|82409749|gb|ABB73858.1| glycyl-tRNA synthetase beta chain [Nitrosospira multiformis ATCC 25196] Length = 739 Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 211/747 (28%), Positives = 343/747 (45%), Gaps = 92/747 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + K E + + LK +G+ ++ + +P RL ++L ++ +P+ ++ Sbjct: 26 PPKSLKKLGESFAQGIAAGLKRQGLAREDAAATPFASPRRLAVHLTCVAAQAPDTSSLKK 85 Query: 71 LGPRV------GAGKKAIDGFLRS-----TGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 L P G A+ LRS + +S + D K ++L + K L Sbjct: 86 LMPVAVGLDENGQPTPALLKKLRSLCGDADPVPFLSQLKRAHDGKTETLFLDSVVKGATL 145 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 E L+T + ++K+P + M + + +++RP + LVA KE ++D+ Sbjct: 146 AEG-LQTALAGTLEKLPIARMMTYQLADG-WNTINFVRPAHA----LVALHGKE-VVDVS 198 Query: 180 LKEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLAS 237 + + G T GHRF A P+ V+ D Y L EE V+ RR I A Sbjct: 199 ILGLTAGRETQGHRFEAMTSPLIVKDADSYEHQLQEEGAVIASFSHRRAEIERQLLAAAR 258 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 L+L LL+E+ LVE +V G F+ +L +P+E + LT++ NQK F G Sbjct: 259 KEDLKLTRYDALLDEVAALVERPRVLTGEFETGFLDVPQECLILTMQANQKYFPLLDARG 318 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ F++VSNI+ D +++ GN RV+ +RL DA F+ DQ+ L+S E Sbjct: 319 QLSHRFLIVSNIRPVDA-RSVIAGNERVLRSRLADAKFFF--DQDRRKTLASRVEG---- 371 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAI 415 + VV+H K+GTQ ERV RI + + I + + A A Sbjct: 372 ----------------LQRVVYHNKLGTQAERVERIWAIAQTIGLQLGGNELAARAGEAA 415 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL T++V EFPELQG +G+ YA DAIE+H KPR + +P N + + Sbjct: 416 MLAKADLLTDMVGEFPELQGIMGRYYAKHDGVAEEVADAIEDHYKPRFAGDELPRNAVGV 475 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+LADKL+TL+ + I + P+G KDP+ALRR LG+IRI++E ++ + L+ +E Sbjct: 476 CVALADKLETLVGLFGIGQIPTGDKDPFALRRHALGVIRILIEKEVPLALNILLEQTADI 535 Query: 532 -----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV--- 571 + L F ++RLK Y I I R N++ T Sbjct: 536 FGQRIKGSAETIAKTATETLEGFIYERLKHYFSAEAIEGQ-ITGFGRSPNEDRSTFSPQQ 594 Query: 572 -------------DLIKHL---NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 D+ K L F + + E + KR+ IL K + EI Sbjct: 595 IDAVLALRPQLLNDVKKRLLAVRAFAALPEAESLAATNKRVGNIL---RKAEVDAGGEID 651 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 L AE+ L+ + + Y L ++ P++ FFD V+VN +D Sbjct: 652 TDLLQTPAEQALHQALDRIIPEADAAFAAGDYTASLQALAALKVPVDQFFDTVMVNTEDA 711 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKIV 702 +R NRL+LL ++ I+ + ++ ++ Sbjct: 712 ALRHNRLALLAQMQKIMNRIADISRLA 738 >gi|317009626|gb|ADU80206.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori India7] Length = 701 Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 216/739 (29%), Positives = 354/739 (47%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ ++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYREMPKKLHALFQKRALEVGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ +V ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPVVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHCIIVETDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYF 294 Query: 291 VTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 T ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 ATFCQKSQEESPTLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 349 ---------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYI 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SSLNMPLEKALELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 450 QYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIA 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFHNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L SA F+ LA I + +N S E S Sbjct: 570 VKIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSTSLFKESQ 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFNAIKMSAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWGVYQSFLEIGDIKEIA 700 >gi|254779566|ref|YP_003057672.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori B38] gi|254001478|emb|CAX29483.1| Glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) (GlyRS) [Helicobacter pylori B38] Length = 701 Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 216/739 (29%), Positives = 356/739 (48%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E +++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNGIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHDIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 T ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 ATFCQKSQEESPTLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 349 ---------------LKKPLDN--APLE--SVVFVQGLGTLKDKMERESIIAQYLTQKYA 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 PSLNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENKLVALSLKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 450 QYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIA 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 LE + L E ++ F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLEFDLKADLKNLFEKVDVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L SA F+ LA I + +N S S Sbjct: 570 VKIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSGFSTSLFKESQ 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFNAIKTSAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWGVYQSFLEIGDIKEIA 700 >gi|57242321|ref|ZP_00370260.1| glycyl-tRNA synthetase, beta subunit [Campylobacter upsaliensis RM3195] gi|57017001|gb|EAL53783.1| glycyl-tRNA synthetase, beta subunit [Campylobacter upsaliensis RM3195] Length = 662 Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 210/721 (29%), Positives = 348/721 (48%), Gaps = 81/721 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ LLKE + Y+TP RL + Sbjct: 1 MKELLIEILTEELPAIPFLKELPNIKGKWEKLLKEYH-LEAEFDFYYTPRRLVFF----H 55 Query: 61 PHSPEKIEERLGPRVGAGKKAI--DGFLRSTGLQTIS-----DCQIKKDPKKGDVYLAVL 113 PH K E L +GA K DG L GL I + QI KG VL Sbjct: 56 PHFKTKQENSLVEFIGAPKNVAYKDGKLSQAGLSFIQKVGIDETQICFREIKGK---EVL 112 Query: 114 RKPKRL----IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 K L +VL ++ ++ + + KSMRW F +IR +++I C+L Sbjct: 113 YYQKELECKESSEVLGEMIESFLKSLHFGKSMRWGAYQ-----FEFIRAIRNIACVL--- 164 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 E ++ + T+ HR + ++ Y LEE V+LDPE R+ I+ Sbjct: 165 --GEDLVKFQSYGVQSSKQTFVHRSVSYEAFAFKNAKEYFELLEENFVILDPEKRKEKII 222 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + + L + +D +LLEE+I + E+ +GSF+ ++L +P E+I +++ NQ+ Sbjct: 223 ESFKLIEAKENLNIAQDDELLEEVIAITEYPNALLGSFESEFLEIPSEVIITSMRENQRY 282 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F T E L+N FI+VSN D + I+ GN RV+ ARL DA+ F+K Sbjct: 283 FAT-FDEKELSNHFIVVSNAVCKD-YSKIIHGNERVLRARLSDAMFFYKN---------- 330 Query: 350 LKESALKFNLDLSKPLD-QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 DL K L+ ++++++ LD +GT ++V R + L + + +D D Sbjct: 331 ----------DLQKGLEPEKLSKMLYLD-----SLGTVMDKVEREKALALLLCKFLDNDK 375 Query: 409 A-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + +A+ SKADL T++V EFP LQG +G YA + AI+E P Sbjct: 376 QEAILQAVHFSKADLATQMVYEFPNLQGIMGSYYAEKMGLSYEISLAIKEQYLPNQSA-- 433 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P+++ S V+LA K DTL++ ++I + PSG+KDPYALRRA GI++I+L L+ Sbjct: 434 LPSSEFSSIVALAYKFDTLLSLFSIGKIPSGTKDPYALRRAANGILKILLHLGKKFDLNA 493 Query: 528 FIEDQNLILFFHDRLKLY--LHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F+++ + D LY + +R + I+A+L +N +L+ I +K L E Sbjct: 494 FLKEASKTYKSFDLNSLYDFILERIYPFYEANPSFIKAVLSTKNSDLIHIDTAVKALIEL 553 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ I KN + I+ EAEK+LY +E Sbjct: 554 SKKTNFNENFSTFKRLANIAT----KNENL---INESLFENEAEKKLYLA-------FKE 599 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 S+ + Q + L ++ I+ FF+ V++N ++ ++++NR +L+ I N L + ++++ Sbjct: 600 SLKVQNLKQKLESLFALKPFIDEFFENVMINSENEKLKNNRQALIFTIYNEFLKIADIKE 659 Query: 701 I 701 + Sbjct: 660 L 660 >gi|317011207|gb|ADU84954.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori SouthAfrica7] Length = 709 Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 215/747 (28%), Positives = 360/747 (48%), Gaps = 90/747 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--------YWTPHRLFL 54 + L+E+ +EE+PA+ +++ L L ++ + +N Q ++TP RL + Sbjct: 5 ELLVEVLTEELPAQALLNEYKEMPKKLHALFQKHALEVRNETQNEARNIEVFYTPRRLCV 64 Query: 55 YLKGLSPHSPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPK 104 +K + E EE GP + G A+ GF + GL+ Q Sbjct: 65 LVKDFPLFTKETKEEFFGPPIEIACNNKDKAQGLNALGLGFYQKLGLKDYKHFQSAFKNN 124 Query: 105 KGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 K +Y A + PK+ ++++ IV ++ + + KSMRW + S+IRP+ +I C Sbjct: 125 KEVLYHAKIN-PKQPTKNLIMPIVLEFLESLNFGKSMRWGSVEK-----SFIRPIHNI-C 177 Query: 165 ILVAEDAKEKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPE 222 +L E ++++KE T HR I V S Y LE+ V+LDP+ Sbjct: 178 VLFN---GENFNNIEIKEYGFKTKQATKTHRQEGFDFIGVNSPREYFEVLEKNHVILDPK 234 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 R IL + L + + + D+DLL+E+I + E+ +G FDK +L LP E+I + Sbjct: 235 KREEKILQEIKELETKHHIIVEVDRDLLDEVIAITEYPSALLGEFDKAFLKLPSEIITTS 294 Query: 283 IKTNQKCFVTRTREGV-----LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFW 337 +K NQ+ F T +EG L N FI+VSN D I+ GN +V+ ARL DA+ F+ Sbjct: 295 MKENQRYFATFNQEGQKEGQKLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFY 353 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 + D L KPLD A L+ VVF +GT +++ R ++ Sbjct: 354 END--------------------LKKPLDN--APLE--SVVFVQGLGTLRDKMERESIIA 389 Query: 398 KKIAQL--------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENI 449 + + Q ++ + L++RAI ++KADL +E+V EF ELQG +G YA+ QNEN Sbjct: 390 QYLTQKYALSLNMPLEKALELMNRAIKIAKADLLSEVVYEFTELQGIMGYYYALKQNENE 449 Query: 450 SCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRAT 509 +++E P +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + Sbjct: 450 WVALSLKEQYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSTGKIPSGSKDPFALRRLS 509 Query: 510 LGIIRII----LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAI 559 G+++I+ L+ + + L E + F + L+ +L +R D +I ++ Sbjct: 510 FGLLKIVAHYGLKFDLKVDLKNLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSV 569 Query: 560 LRPENDNLLTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEIS 615 L +++ I+ +K L F +A+ ++ L SA F+ LA I + +N + S Sbjct: 570 LNTNERDIVAIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNQTSGFS 626 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 E L+ + T ES+D K G LH P+E +F VLV D Sbjct: 627 ANLFKEPQEHALFKAFNALKTSAFESLDSKIEAYFG--LHV---PLEEYFKSVLVMDKDL 681 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKIV 702 E++ NR + L + L + ++++I Sbjct: 682 EIQKNRKNFLWNVYQSFLEIGDIKEIA 708 >gi|285016900|ref|YP_003374611.1| glycyl tRNA synthetase, beta subunit protein [Xanthomonas albilineans GPE PC73] gi|283472118|emb|CBA14625.1| probable glycyl trna synthetase, beta subunit protein [Xanthomonas albilineans] Length = 716 Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 195/735 (26%), Positives = 334/735 (45%), Gaps = 85/735 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKG 58 M L+E+ +EE+P + A+ L +I L + G+ + + + TP RL + L G Sbjct: 3 MHPLLIELGTEELPVKALPGLAQALFDGVIAGLDKRGIAVERGDAKPLSTPRRLAVLLPG 62 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ PE+ E LGP + G KA++GF G+ + + +D KG+ ++ Sbjct: 63 VAAEQPEQRAEVLGPYLNIALDADGQPTKALEGFAAKAGIAWTA-LERTRD-AKGERFVH 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P +L I+ AI +P PK MRW + + RP++ ++ +L E Sbjct: 121 RAVHPGARTATLLPDILREAIAAMPIPKPMRWGDHD-----YGFARPVQWLVLLLGNE-- 173 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ L + + GHRF P+ + Y+ L+ A VL+DP+ RR I+ + Sbjct: 174 ---VVPAHLLGVQADRHSRGHRFLHDAPVTLAQPGDYVAALQAAQVLVDPDVRRARIVAE 230 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A G +D L +++ LVEW + F+ +L +P+E + T+++NQK F Sbjct: 231 VEQAARQAGGRARIAEDNLAQVVNLVEWPSAVLCRFEPAFLAVPQEALIETMESNQKFFP 290 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI ++NI + D A + +G RV+ R DA F+ D LK Sbjct: 291 VLDADGKLTEHFIGIANIVSRDV-AEVAKGYERVIRPRFADAKFFFDED---------LK 340 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + + L+ V + AK+G+ ++V R+ L + IA + AD A Sbjct: 341 QGLEAMGVGLAG-------------VTYQAKLGSLADKVRRVAALAEAIAAQVGADPAQA 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSK DL + +V EFPELQG G+ YA E AI+E +PR +++ + Sbjct: 388 RRAAELSKNDLQSRMVNEFPELQGIAGRYYASAAGEPRDIALAIDEAYQPRFAGDDIALS 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS----- 526 + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ LS Sbjct: 448 PLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDVDLSEALVA 507 Query: 527 --------------------------------QFIE-DQNLILFFHDRLKLYLHDRDIRH 553 Q+ + Q + F DRL+ Y D+ + Sbjct: 508 AAKLLPWEQLVRKAELPNKLPNEHPTSEIDSIQYAQLAQEVYDFILDRLRGYYADKGVPA 567 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 A+ + +L + I + F + + + + KRI IL K I + Sbjct: 568 THFNAVAELKLASLYDVDRRIDAIGTFAALPEADALAAANKRIRNIL---RKAEDAIPAQ 624 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 + L AE+ L + ++ + Y + ++L + ++ FFD V+VN + Sbjct: 625 VDAALLREPAERALAEAVEAAIVETDGTLRQRDYVSVLNVLARLRPQVDAFFDGVMVNAE 684 Query: 674 DREVRDNRLSLLQYI 688 +R NRL+LL+ + Sbjct: 685 APALRGNRLALLKRL 699 >gi|261838340|gb|ACX98106.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori 51] Length = 700 Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 217/738 (29%), Positives = 355/738 (48%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFNQKSQESPTLHNGFIVVSNAINKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---- 402 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAS 389 Query: 403 ----LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMSLEKALELVSRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L +++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L SA F+ LA I + +N S E S E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSISLFKELQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K G LH+ P+E +F VLV D ++ NR + Sbjct: 627 HALFEAFNAIKTSAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIGIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|262065838|ref|ZP_06025450.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium periodonticum ATCC 33693] gi|291380421|gb|EFE87939.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium periodonticum ATCC 33693] Length = 687 Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 205/733 (27%), Positives = 357/733 (48%), Gaps = 86/733 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI EEIPAR +A +L LK + Y+ ++ Y TP RL L + ++ Sbjct: 4 LFEIGMEEIPARFLSQALTELKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVADMQE 63 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK- 117 + E +GP + G KA +GFL + + S +I K+ K G+ Y+A R K Sbjct: 64 DLDELNIGPSRERAYKDGELSKAGEGFLNAYKIDE-SQIEIVKNDK-GE-YIAFKRFAKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I+ + + +PKSM+WS + RP++ +L + +++ Sbjct: 121 EATEKLLPEILKELVLEETFPKSMKWSD-----KTIRFARPIEWLLALY-----GNNVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I N + GHRF +V S++ Y+ + E V++D RR I + Sbjct: 171 FEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLNKIRENNVIIDISERRKMI----EEMID 225 Query: 238 AVGLELVE---DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 V LE + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F Sbjct: 226 KVLLEDEKADIDEGLLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILD 285 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI++ N D + +GN +V++ARL DA F++ D Sbjct: 286 KKGKLLPKFIVIRN--GIDFSQNVKEGNEKVLSARLADARFFYQED-------------- 329 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR-----VLGKKIAQLIDADVA 409 L PLDQ + +L VVF +GT +V R ++GK + AD+ Sbjct: 330 ------LKIPLDQNVEKLKT--VVFQKDLGTMFNKVKRTEKIAEFLIGKLKYNYMKADIL 381 Query: 410 LVDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 R + L+KADL + ++ +EF +LQG +G +YA+ + E I I+EH PR + Sbjct: 382 ---RTVKLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEIGVAIGIKEHYYPRFQGDL 438 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--------LEN 519 +P+ I L+D++DTL+ + + P+GSKDP+ALRR LGI+ II L+ Sbjct: 439 LPSGIEGIITGLSDRIDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANINISLKE 498 Query: 520 KIDIPLSQFIEDQ-----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 +++ L DQ +++ F R+ D R D++ A+L + DN+ Sbjct: 499 LVNVSLDALQADQVLKGDRAKVEADVLDFLKQRMINVFTDMKYRKDIVLAVLDRDADNIT 558 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 ++++K ++E + K E L AKR+ I+ K N ++ + + E EK L+ Sbjct: 559 NALEIVKVISEKLALNKLEALLQVAKRVTNIIT---KGNNNVT--VKEKLFKEEIEKTLF 613 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A ++S+ Y + + S+ I+ +F+ V+V +D+ +R+NR++ L +I Sbjct: 614 AEAKKIAEEAEKSIKENEYADYFEKMISLVPTIDKYFETVIVMDEDKNIRENRINQLTFI 673 Query: 689 KNIILIVINVQKI 701 KN+ + + KI Sbjct: 674 KNLFDRIAYLNKI 686 >gi|303245471|ref|ZP_07331755.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio fructosovorans JJ] gi|302493320|gb|EFL53182.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio fructosovorans JJ] Length = 697 Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 206/721 (28%), Positives = 335/721 (46%), Gaps = 72/721 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FL EI EE+PAR E+ + L + + + + TP RL + + L+ Sbjct: 1 MPHFLFEIGFEEMPARFLAGLTEEARALFSEELAQVKLGSDAVAAFATPRRLVVSIPELA 60 Query: 61 PHSPEKIEERLGP--RVG---AGKK--AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 SP + E GP RVG +G A GF + G + ++D + + K YLA L Sbjct: 61 EASPREEEVVTGPPERVGFDASGNPTPAASGFAKGQG-KDVADVFVMETEK--GRYLA-L 116 Query: 114 RKP--KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 RK ++L I ++K+ +PK MRW + F++ RP+ L +L +DA Sbjct: 117 RKTVGGETAMNLLPGICQDVVKKLSFPKRMRWGSRE-----FAFGRPVHWFLALL--DDA 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHY---IRDLEEAMVLLDPECRRNAI 228 ++ L +I G T GHR P P + + Y IRD + V+LD R + Sbjct: 170 ---VVPFRLDDIASGRETRGHRIMGPGPFSIATAKDYFAVIRD--QGKVILDAREREGMV 224 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + A +LA+ G V + LL E+ GL E V +G FD K+L +P E++ +++++QK Sbjct: 225 RSQAEKLAAEAGGTAVINPTLLMEVTGLTEHPVVVLGRFDPKFLDVPREVLITSMESHQK 284 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + +G L F+ + +D + +G RV+ ARLEDA FW+ Sbjct: 285 SFAVQDGKGGLLPVFLTTLGLMPADL-ELVRRGWQRVLTARLEDARFFWE---------- 333 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 DL ++ +L+ VVF A +G+ ++ R+ L +A+L Sbjct: 334 ----------ADLGTDIETWQKKLE--SVVFLAGLGSMRDKARRLERLCGVVAELSGKPE 381 Query: 409 ALVD--RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +++ +A LSK DL + +V EF ELQG +G Y + ++ + A+ E P GP Sbjct: 382 IMLEASQAGGLSKVDLVSTMVGEFAELQGIMGGIYVRRKGQSETVSRAVGEQYLPAGPDS 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 VP +S+ADK DTL + + P+G+ DPYALRRA LGI RI++E+ + L Sbjct: 442 PVPATLAGAILSVADKADTLAGCFGNDMAPTGAADPYALRRAALGICRIVIEHGLRFDLM 501 Query: 527 QFIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++ L+ FF RL+ Y R ++EA + ++ Sbjct: 502 ELLQAAIDGYGDLKFKVDRTHLLAKLLDFFGQRLRAYFTGRGFDTLVVEAAVGASFTDIA 561 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRL 627 + + + L F ++ + +L+ KR I+ + +S I P+ L +AEK L Sbjct: 562 ALAERVAALAAFAATPDFGQAVLTFKRAANIIRKQGVGAGVPLSGAIKPELLEEQAEKDL 621 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 A Y + D+L+ + ++ FFD V+V D +VR NRL+LL+ Sbjct: 622 AAACEAVFPRYDALFHAGDYAAVLDVLYELRPTVDAFFDNVMVMCDAMDVRLNRLNLLKA 681 Query: 688 I 688 + Sbjct: 682 L 682 >gi|34556652|ref|NP_906467.1| glycyl-tRNA synthetase subunit beta [Wolinella succinogenes DSM 1740] gi|34482366|emb|CAE09367.1| GLYCYL-TRNA SYNTHETASE BETA CHAIN [Wolinella succinogenes] Length = 682 Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 193/677 (28%), Positives = 327/677 (48%), Gaps = 63/677 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQI 99 ++TP RL L + PE E GP + GA KA + F G +S ++ Sbjct: 46 FYTPRRLVLLSQAFPLEQPELKEALFGPPLEIAFKEGAPTKAAESFAAKCG---VSVSEL 102 Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQK----VPWPKSMRWSTTHSPISAFSW 155 K+G VL K + K ++P+ I++ + + KSMRW + H ++ Sbjct: 103 GSATKEGK---EVLFYSKTSAGESAKRLLPLMIEEWIASLNFGKSMRWGSLHE-----NF 154 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA 215 IRP++ L I+ E+ +I L I +TY HR + P + + ++ L + Sbjct: 155 IRPVR-WLGIMHGEN----LIPATLFGISSQKLTYVHRIDSFEPQPYEDIASFLALLAQK 209 Query: 216 MVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLP 275 V+LDP+ RR IL + + G+ + D DLLEE++ + E+ +G F+ ++L LP Sbjct: 210 GVILDPKVRREKILQEIRDIEEREGVSVELDTDLLEEVVAITEYPTALLGHFEARFLELP 269 Query: 276 EELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALH 335 E+I ++K NQ+ F + L N FI+VSN + S IVQGN +V+ ARL DAL Sbjct: 270 PEVIITSMKENQRYFALYQGDK-LYNGFIVVSNAR-SQNAKLIVQGNEKVLRARLSDALF 327 Query: 336 FWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR--LDMLDVVFHAKIGTQGERVSRI 393 F++ D N L+E L +R + L + D+ + + + Sbjct: 328 FYQNDLKNGLLTERLQEVTFVEGLGSMAQKSERETKIALYLFDLYASKLFASSPKNQEEL 387 Query: 394 RVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD 453 R L+ A L+KADL +E V EF ELQG IG ++ + Sbjct: 388 RT--------------LMQEAATLAKADLMSETVYEFTELQGTIGYYLGKALGKDPLVYE 433 Query: 454 AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 A++E P+G +P++ S ++LA +LD L+ +++ P+GSKDP+ALRRA G++ Sbjct: 434 ALKEQYLPKGEDSELPSSPFSAILALAHRLDNLMGLFSLGRIPTGSKDPFALRRAASGVL 493 Query: 514 RIILENKIDIPLSQFIEDQNLIL--FFHDRLKLYLHDR-----DIRHDLIEAILRPENDN 566 RI+ + KI + LS + + + F L+ ++ +R I A+ N Sbjct: 494 RIVWKQKIPLDLSIVLPELAPLYKPFALKELEGFILERIESLLSTNASFIRAVAMGGERN 553 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS--LEISPQYLLLEAE 624 LL + + I+ L+ SS++G+ + KR+ I K ++ EI P++L E E Sbjct: 554 LLFVGEKIEALSALLSSSEGKSLSTTFKRVANI-----TKGMDMGDLPEIKPEWLECEEE 608 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 KRL+A + + ++ ++ LL + EP++ FFD VL+N D+ ++ NR +L Sbjct: 609 KRLFAEFN----QVSQATHPSALEELSALLK-LKEPLDQFFDHVLINCDNTLLKKNRQAL 663 Query: 685 LQYIKNIILIVINVQKI 701 + +I L + ++++I Sbjct: 664 IAHIYQAFLHIADIKEI 680 >gi|308183122|ref|YP_003927249.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori PeCan4] gi|308065307|gb|ADO07199.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori PeCan4] Length = 700 Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 214/738 (28%), Positives = 351/738 (47%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKHALEVGKIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW + S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIIPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHHIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFNQKSQESPTLHNGFIVVSNAISKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAS 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L +++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFHNLIDCNPSIIRSVLNTNERDIV 569 Query: 569 TIVDLIKHLNEFFSSAKG---EKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F K ++ L SA F+ LA I + +N S E S E Sbjct: 570 KIIQKVKALKRFLDDPKNAPKKELLFSA---FKRLANINKDRNPNESSEFSTHLFKEPKE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T E +D K + S+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNTIKTSAFEGLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|332673814|gb|AEE70631.1| glycyl-tRNA synthetase beta subunit [Helicobacter pylori 83] Length = 700 Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 217/738 (29%), Positives = 354/738 (47%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGTIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQEIKEEFFGPPVKIACNHQDKMQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHHIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFNQKSQESPTLHNGFIVVSNAINKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAS 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L +++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L SA F+ LA I + +N S E S E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSISLFKELQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K G LH P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSAFESLDSKIEAYFG--LHV---PLEEYFKSVLVMDKDVEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|218677813|ref|ZP_03525710.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli CIAT 894] Length = 214 Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 113/203 (55%), Positives = 150/203 (73%) Query: 429 EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLIN 488 EFPELQG +G++YAVLQ EN S AIE+H KP+GP + VP +K++ITV+LADKLDTLI Sbjct: 2 EFPELQGLMGRKYAVLQGENASVAAAIEDHYKPQGPSDRVPEDKVAITVALADKLDTLIG 61 Query: 489 FWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHD 548 FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL +D +L+ FFHDRLK+YL D Sbjct: 62 FWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATSKDTDLLSFFHDRLKVYLRD 121 Query: 549 RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR 608 + RHDLI+A+L PE D+LL + ++ L F +S G+ L KR Q+LA EEKK Sbjct: 122 QGARHDLIDAVLTPEADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQLLAAEEKKGT 181 Query: 609 EISLEISPQYLLLEAEKRLYAVI 631 I+ +SP L L+AEK L+A I Sbjct: 182 VIADAVSPALLKLDAEKELFAAI 204 >gi|255322368|ref|ZP_05363514.1| glycyl-tRNA synthetase, beta subunit [Campylobacter showae RM3277] gi|255300741|gb|EET80012.1| glycyl-tRNA synthetase, beta subunit [Campylobacter showae RM3277] Length = 677 Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 201/738 (27%), Positives = 347/738 (47%), Gaps = 107/738 (14%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ-------------YWTP 49 + ++EI EE+PA I LKE G + R+ Y+TP Sbjct: 6 ELIVEIGVEELPA--------------IPFLKECGNVAAKWRETLAQNGLDSECEFYYTP 51 Query: 50 HRLFLYLKGLSPHSPEKIEERLG-PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKK--- 105 R+ Y + + E +G PR A K DG L C I + K Sbjct: 52 RRIAFYHPKFAVRQEDGYSEFIGAPRQVAQK---DGAWTPAALSFAKKCGIAESELKFET 108 Query: 106 -GDVYLAVLRKP--KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSI 162 G + +KP + ++L ++ + + + KSMRW F +IRP++S Sbjct: 109 VGGKEVLYYKKPVAGKPSAELLGDMIEKFLLGLNFGKSMRWGEGK-----FEFIRPVRSF 163 Query: 163 LCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPE 222 LC+L ++++ + ++ G+ + HR + V++ Y + + V+LD Sbjct: 164 LCLL-----GDEVVKFNKFDVESGDSIFMHRSVSYDKFTVKNAKDYFAAMPKIGVILDQN 218 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 RR IL++ ++ + G+ + D+ LL+E++ + E+ +G F++++L +P E+I + Sbjct: 219 ARREKILSEFKQIEAKNGVTVEADEALLDEVVAITEYPTALLGGFEREFLEVPSEVIITS 278 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-- 340 +K NQ+ F G LAN F++VSN + + A IV+GN +V+ ARL DA+ FW+ D Sbjct: 279 MKENQRYFPV-FEGGKLANRFVVVSNAISPEP-ALIVKGNEKVLRARLSDAMFFWRSDLA 336 Query: 341 ----QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL 396 L N++ LKE L D+ + L + +R+++I Sbjct: 337 HEFGPEKLKNITYLKE--------LGSTYDKSVRELGV------------AKRLAKI-CA 375 Query: 397 GKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + A + AL++RA++LSKADL T++V EF ELQG +G YA + EN + AI+ Sbjct: 376 DRLKACAGEGYEALLERAVMLSKADLTTQMVYEFTELQGVMGGYYAAAKGENENVVTAIK 435 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 E P G +P+ S V+LA KL+TLI ++ + PSG+KDPYALRRA G+I+II Sbjct: 436 EQYLPSGEASALPSTIFSSVVALAIKLETLIGLFSAGKIPSGNKDPYALRRAANGVIKII 495 Query: 517 LENKIDIPLSQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 +++ ++ F+ + + LI F DRL + D+ +++A L + + Sbjct: 496 QNENLNLDIAAFLRETAEGYAKFDVEALIGFIFDRLYTFF---DVNPSVVKACLASKKGD 552 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 +L + I L ++ + + KR+ I+ E + + E+EK+ Sbjct: 553 VLAQCEAIDALGAICAADDFRQNFSTFKRLANIIKDENFGS------VDEAKFENESEKK 606 Query: 627 L---YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 L + G E + + L + I+ FFD V++N +D VR NRL+ Sbjct: 607 LNDAFKAAVKAGGSYSERLKN---------LFGLKVAIDEFFDNVMINAEDELVRKNRLA 657 Query: 684 LLQYIKNIILIVINVQKI 701 L+ I L + ++++I Sbjct: 658 LVGQIYTEFLKIADIKEI 675 >gi|15645587|ref|NP_207763.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori 26695] gi|3024686|sp|P56454|SYGB_HELPY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|2314109|gb|AAD08014.1| glycyl-tRNA synthetase, beta subunit (glyS) [Helicobacter pylori 26695] Length = 701 Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 215/739 (29%), Positives = 354/739 (47%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQYFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +D++ IV ++ + + KSMRW S+IRP+ +I + ED Sbjct: 125 IHE-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGED-- 176 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 177 --FSGIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHHIIVETDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYF 294 Query: 291 VTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 T ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 ATFCQKSQEESPTLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 349 ---------------LKKPLDN--APLE--SVVFVQGLGTLKDKMERESIIAQYLTQKYI 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SSLNMPLEKALELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 450 QYLPASENAPLPSSVFSSIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIA 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 LE + L + + F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLEFDLKADLKNLFQKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L SA F+ LA I + +N S E S Sbjct: 570 VKIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSTNLFKEPK 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + + ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFNAIKMNAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWGVYQSFLEIGDIKEIA 700 >gi|317014380|gb|ADU81816.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Gambia94/24] Length = 701 Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 209/726 (28%), Positives = 348/726 (47%), Gaps = 78/726 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFVKDFPLLTQETKEEFFGP 75 Query: 74 RV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V G A+ GF + GL+ Q K +Y A + K+ +D+ Sbjct: 76 PVKIACNNQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAKIH-AKQPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + IV ++ + + KSMRW S+IRP+ +I + E+ + I++ Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFND--IEVKGYGF 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 T HR I+V S Y LE+ V+LDP+ R IL + L + + Sbjct: 188 KTKQATKAHRQEGFDFIEVDSPKAYFEILEKNHVILDPKKREAKILQEIKGLEKKHDIIV 247 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-----V 298 D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F T +++ Sbjct: 248 EMDRDLLDEVVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQRYFATFSQKSQEESPT 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 308 LHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND------------------ 348 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--------IDADVAL 410 L KPLD A L+ VVF +GT +++ R ++ + + Q ++ + L Sbjct: 349 --LKKPLDN--APLE--SVVFVQGLGTLKDKMERESIIAQYLTQKYISSLNMPLEKALEL 402 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P +P+ Sbjct: 403 VKRAVQIAKADLLSEVVYEFSELQGIMGYYYALEQNENELVALSVKEQYLPASENAPLPS 462 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----LENKIDIPLS 526 N S V+L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II LE + L Sbjct: 463 NVFSAIVALSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLK 522 Query: 527 QFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 E + F + L+ +L +R D +I ++L +++TI+ +K L F Sbjct: 523 NLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIVTIIQKVKALKRF 582 Query: 581 F---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 +A+ ++ L SA F+ LA I + +N E S + E L+ + T Sbjct: 583 LDDPKNAQKKELLFSA---FKRLANINKDRNPNEKSEFSTRLFKEPKEHALFEAFNAIKT 639 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ES+D K + S+ P+E +F VLV D E++ NR + L + L + Sbjct: 640 SAFESLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWDVYQSFLEIG 694 Query: 697 NVQKIV 702 ++++I Sbjct: 695 DIKEIA 700 >gi|317178678|dbj|BAJ56466.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F30] Length = 701 Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 213/739 (28%), Positives = 352/739 (47%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFSKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V D GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW + S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKAHRQEGFDFIRVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYF 294 Query: 291 V-----TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AVFDQKSQEESPTLHNGFIVVSNAINKDK-QKIIAGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 349 ---------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYA 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SSFNMPLEKALELIGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 QYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVV 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L S F+ LA I + +N S E Sbjct: 570 VKIIQKVKALKRFLDDPKNAQKKELLFST---FKRLANINKDRNPNESSEFFISLFKESQ 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + T + ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFNAIKTSVFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWGVYQSFLEIGDIKEIA 700 >gi|210135161|ref|YP_002301600.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori P12] gi|238064851|sp|B6JMJ2|SYGB_HELP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|210133129|gb|ACJ08120.1| glycyl-tRNA synthetase beta subunit [Helicobacter pylori P12] Length = 701 Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 215/739 (29%), Positives = 356/739 (48%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGTIEVFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVG---------AGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKMQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E ++++KE T HR I+V S Y LE+ V+LDP+ R+ IL Sbjct: 175 ENFNNIEVKEYGFKTKQATKTHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKRKAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHHIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 +++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AVFSQKSQEESPTLHNGFIVVSNAISKDK-QKIIAGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD A L+ VVF +GT +++ R + + + Q Sbjct: 349 ---------------LKKPLDN--APLE--SVVFVQGLGTLKDKMERESTIAQYLTQKYA 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 PSLNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSLKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 450 QYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIA 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLEFDLKADLKNLFEKVGIYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L SA F+ LA I + +N S S Sbjct: 570 VKIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSGFSISLFKELQ 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFNAIKTSAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWGVYQSFLEIGDIKEIA 700 >gi|315586911|gb|ADU41292.1| glycyl-tRNA synthetase beta subunit [Helicobacter pylori 35A] Length = 700 Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 215/738 (29%), Positives = 354/738 (47%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW + S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKVHRQEGFDFIRVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFNQKSQESPTLHNGFIVVSNAINKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAP 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALEQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L +++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQKFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L S F+ LA I + +N S E E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFST---FKRLANINKDRNPNESSEFFISLFKESQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSTFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|289668590|ref|ZP_06489665.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 731 Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 207/766 (27%), Positives = 340/766 (44%), Gaps = 111/766 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFEGVLSGLEKRGVAITRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAAGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P ++L I+ AI +P PK MRW +++ RP++ ++ + E Sbjct: 120 VHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGTE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I+ Sbjct: 175 -----VIPAELLGVRGDRITRGHRFMHEGTVSLAAPGDYVEALRAAHVLVDPDARRTRII 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 EEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NIQ+ D A + +G RV+ R DA F Sbjct: 290 FPVLDDGGKLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L Q M + V + AK+GT ++V+R+ L + IA + AD Sbjct: 336 -------FDEDLKQGL-QAMGD-GLASVTYQAKLGTVADKVARVAALAEAIAPQVGADPV 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 HARRAAQLAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID------- 522 + + +++AD+LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D Sbjct: 447 LSPLGKVLAIADRLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDVKATL 506 Query: 523 ------IPLSQFI-----EDQNLIL----------------FFHDRLKLYLHDRDIRHDL 555 +P + + +D+ I F DRL+ Y D+ + Sbjct: 507 VIAVKLLPWDRLVRKATLKDEETIAAIDSAQYAQLTSEVFDFILDRLRGYYADKGVPATH 566 Query: 556 IEAI-----LRPEN---------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 A+ + PE +L I + F + + E + KR Sbjct: 567 FNAVAALFSVAPEGAPTAHGVGASLGATHGSLYDFDRRIDAIGSFATLPEAEALAAANKR 626 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 I IL K EI +I L AE+ L + +++ Y + L Sbjct: 627 IRNIL---RKVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARLA 683 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ + Sbjct: 684 RLRPQVDAFFDAVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEHL 729 >gi|153005319|ref|YP_001379644.1| glycyl-tRNA synthetase subunit beta [Anaeromyxobacter sp. Fw109-5] gi|152028892|gb|ABS26660.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter sp. Fw109-5] Length = 697 Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 208/732 (28%), Positives = 342/732 (46%), Gaps = 74/732 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A + L L L + + ++ TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPPALKQLQEDLARALDAARLSHGEVKAVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E LGP V G +A GF +S G+ +S + + PK V AV Sbjct: 61 RRQTDAKTEALGPPVAQAFDASGNPTQAALGFAKSQGVD-VSKLERAQTPKGERV--AVT 117 Query: 114 R-KPKRLIEDVLKTIVPVAIQKVPWPKSMR--WSTTHSPISAFSWIRPLKSILCILVAED 170 R + R E VL ++ + + + K+MR W ++ RP++ ++ + Sbjct: 118 RIEEGRKAEKVLPELLERLLGGLRFKKAMRSRWDEV-------TFARPIRWMVALYGG-- 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSL-DHYIRDLEEAMVLLDPECRRNAIL 229 K + + E+ G +T+GHRF AP I ++ D Y+ L A VL+DP RR A+ Sbjct: 169 ---KPLKVRHGELVSGAVTFGHRFAAPRSIALKGTPDDYVAKLRRAKVLVDPVERRAALE 225 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + + A A G +L D+ L+E+++ LVE G F+K L LP E++ ++ +Q+ Sbjct: 226 QELAKAAKAAGGKLRPDEPLVEQVLYLVEHPTGVAGEFEKSNLDLPPEVVVSEMRNHQRY 285 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L N F+ VS D A G RV+ ARL DA F Sbjct: 286 FALVDGKGRLKNRFVAVSGTPVKDPRVA-RHGYERVLRARLADARFF------------- 331 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 F+ D +PL R+ D+ F A++G++ R RI +G +A+ I + Sbjct: 332 -------FDEDKRRPLRDRIE--DLGRRTFQARLGSELARADRIVAIGSALARAIGREEL 382 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V+ V A L+K DL T +V EFPELQG +G YA L+ +AIE+H KP G E Sbjct: 383 VSDVVEAARLAKTDLTTGMVGEFPELQGVMGGHYARLEGLKPEIAEAIEDHYKPVGASEE 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + V++AD+L +L+ + EK +G+ DP+ LRRA +GI+R++L + LS Sbjct: 443 MPRGDVGALVAIADRLHSLVGIIGVGEKATGAADPFGLRRAAIGILRLLLARGYHLSLSA 502 Query: 528 FIED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 IE + ++ F RL+ + + DL+EA+L D+++ Sbjct: 503 AIEQTLDTLGGVRLASDRAVVAEQVLDFLRGRLRAQWSE-EFDADLVEAVLGAGFDDVVD 561 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++ L E + A ++ KR+ I ++K+ + Q L EAE+ L + Sbjct: 562 ARRRLEALAEVKARADFVPLAVAFKRVANI----QEKSETAGAVVDRQLLREEAERHLLS 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + Y + + ++ + FFD VLV ++ VR NRL L++ + Sbjct: 618 ELERVESEAAALRGTRDYPGVLRNVATLEPAVARFFDDVLVMAEEPAVRANRLGLMRRVA 677 Query: 690 NIILIVINVQKI 701 + V + +KI Sbjct: 678 ALFSGVADFRKI 689 >gi|261839755|gb|ACX99520.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori 52] Length = 701 Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 213/739 (28%), Positives = 353/739 (47%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+EI+ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHHIIVETDRDLLDEIVAITEYPSALLGEFDKAFLKLPNEIITTSMKENQRYF 294 Query: 291 VTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 +++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFSQKSQEESPTLHNGFIVVSNAINKDK-QKIIAGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 349 ---------------LKKPLDN--APLE--SVVFVQGLGTLKDKMERESIIAQYLTQKYA 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 PSLNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 QYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVA 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 L + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLGFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L SA F+ LA I + +N S E S Sbjct: 570 VKIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSTSLFKELQ 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + T E +D K + S+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFNAIKTSAFEGLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWGVYQSFLEIGDIKEIA 700 >gi|154148492|ref|YP_001406797.1| glycyl-tRNA synthetase subunit beta [Campylobacter hominis ATCC BAA-381] gi|153804501|gb|ABS51508.1| glycyl-tRNA synthetase, beta subunit [Campylobacter hominis ATCC BAA-381] Length = 674 Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 206/728 (28%), Positives = 363/728 (49%), Gaps = 86/728 (11%) Query: 3 DFLLEIYSEEIPA-----RMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 + L+EI +EE+PA ++ A + I+ L+ E +TP RL L K Sbjct: 2 ELLIEIGTEELPAIPFLKEFKNIAPKWREILCKNSLETE------FEFEFTPRRLVLIHK 55 Query: 58 GLSPHSPE-KIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGD-------VY 109 S P+ +I + P+ A K DG L C I ++ K + +Y Sbjct: 56 NFSEFQPDSEIIKTGAPKNIALK---DGVFTKAALSFAKKCGISENELKFENVDGKEVLY 112 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L+K K E +L +++ + + + +SMRW FS+IRP++S+ C+L Sbjct: 113 YKKLQKGKASAE-ILGSMIEEFLLSLNFGRSMRWGNGE-----FSFIRPIRSVACLL--- 163 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D K +D + + + HR I+ + D Y + L + ++L + R+ IL Sbjct: 164 DGKN--VDFKIFGVQSRAAFFPHRNFGYELIRFRDSDEYFKLLAKNGIILKSDDRKTEIL 221 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 ++ ++ G+++ D +LL E+I + E +G+FD+ +L +P+E+I ++K NQ+ Sbjct: 222 SEFGKIERENGVKIQIDNELLNEVIAITEHPTALLGNFDESFLAVPKEVIITSMKENQRY 281 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD------QNN 343 F G L+N F++VSN + D G I++GN +V+ ARL DA+ FW+ D +N Sbjct: 282 FPV-FENGKLSNHFVVVSNAVSDDNGL-IIKGNEKVLRARLSDAMFFWQNDLKAEFSENK 339 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 L N+S + L ++ + L+ AKI + + ++ KK Sbjct: 340 LKNVSYMD--------GLGSVYEKELRELET------AKIFAEFYK-DELKNEFKK---- 380 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 D ++RAI+LSKADL + +V EFPELQG +G YA+ +NE+ AI E P G Sbjct: 381 -DCFENEINRAIMLSKADLTSSMVGEFPELQGVMGSYYALYKNEHPLVARAIYEQYLPNG 439 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 +P S ++++ K +TLI ++I + P+G+KDPYALRRA LGI++I+L ++ Sbjct: 440 ENSELPNGIFSSIIAISVKFETLIGLFSIGKIPNGNKDPYALRRAALGILKIVLNQNLNF 499 Query: 524 PLSQFIE---------DQN-LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ I+ D+N LI F DRL L+D ++ +I+A + +++ + Sbjct: 500 NIASVIKKLAKNYAKFDENSLINFLKDRL-YSLYDANV--SVIKACINSGENDIKKLNSA 556 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I L+E A + + KR+ I+ K+ +I + ++ E E L +V Sbjct: 557 IISLDEISKEADFSEKFATFKRLANII-----KDEKIGV-VNEALFENETEILLNSVFKS 610 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + D K Y + L ++ + I+ FFD+V++N +D++++ NR++L+ I N L Sbjct: 611 LDLNDE---DCKNYL---NSLFALKDKIDEFFDKVMINAEDKKIKANRIALIGQIYNAFL 664 Query: 694 IVINVQKI 701 V ++++I Sbjct: 665 KVADIKEI 672 >gi|217033940|ref|ZP_03439363.1| hypothetical protein HP9810_883g10 [Helicobacter pylori 98-10] gi|216943573|gb|EEC23021.1| hypothetical protein HP9810_883g10 [Helicobacter pylori 98-10] Length = 700 Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 212/738 (28%), Positives = 351/738 (47%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V D GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFNQKSQESPTLHNGFIVVSNAINKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAP 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L +++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L SA F+ LA I + +N S E S E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSTSLFKELQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T E +D K + S+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSAFEGLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|67906631|gb|AAY82727.1| hypothetical protein [uncultured bacterium eBACmed86H08] Length = 544 Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 170/552 (30%), Positives = 262/552 (47%), Gaps = 49/552 (8%) Query: 155 WIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE 214 W RPLKSIL K+++ + N TY + K + Y + Sbjct: 4 WGRPLKSILACF-----DYKVLEFSYHHLNSSNFTYLDKDFEEKTNKFSNFKTYKEFFKS 58 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 ++LD R I N + L+L +K LL E+ +VE + FDK++L + Sbjct: 59 KGIILDHNKREEFIENQLLKKTKLDRLKLTPNKKLLTEVTNIVEKPNIIKCKFDKRFLKI 118 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E++ T++ +QK F T + L N F +V++ SD I GN RVV ARL DA Sbjct: 119 PKEILVTTMEVHQKYFPTFDNKDNLTNVFFVVAD--NSDTKGLIKLGNERVVEARLNDAQ 176 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 FW D+N NL D+ +V + +GT ++ R+R Sbjct: 177 FFW--DKNKTKNLVK--------------------GISDLKNVNYFEGLGTYFDKTQRLR 214 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 LG I+ + V+ A + K DL +++V EFPELQG +G +A Q + C A Sbjct: 215 KLGSLISDELLISKEKVEVASSICKVDLVSDLVGEFPELQGVMGGHFAKAQGFDNETCLA 274 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 I EH P GP P S+T++L+DK+DTL+ F+ IN KPS SKDPYALRR+ +G+IR Sbjct: 275 ISEHYLPTGPETKTPKKPYSVTLALSDKIDTLVGFFTINLKPSSSKDPYALRRSAIGLIR 334 Query: 515 IILENKIDIPLSQFIE------------------DQNLILFFHDRLKLYLHDRDIRHDLI 556 +I+ENK++I L I Q+L+ FF +RLK Y+ ++ +R D+I Sbjct: 335 LIIENKLEIKLKDLINYSCILFAEQDLDFDIKTVQQDLLNFFSERLKFYMKEKKVRPDII 394 Query: 557 E-AILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEI 614 E +I D + I + LN+ G+ + S KR IL+ E KN+ E+ Sbjct: 395 ECSINSYSADQIYKIYNKAFILNKLIDKNIGQDVIFSYKRASNILSNEISKNKIELENST 454 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 P + EK+LY I + + + + ++L + FFD +VN ++ Sbjct: 455 DPGLFKNDFEKKLYKKIQELRKYFTSLGSREDCKKTLEVLADAKTDVSNFFDNGIVNDEE 514 Query: 675 REVRDNRLSLLQ 686 ++ L L+Q Sbjct: 515 EAIKKIGLELMQ 526 >gi|317012780|gb|ADU83388.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Lithuania75] Length = 701 Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 217/739 (29%), Positives = 354/739 (47%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKCALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K+ +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKQPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKTHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHQIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 T +++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 ATFSQKSQEESPTLYNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 349 ---------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYA 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 PSLNMPLEKALELIGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++II Sbjct: 450 QYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSAGKIPSGSKDPFALRRLSFGLLKIIA 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L SA F+ LA I + +N S S Sbjct: 570 VKIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSGFSISLFKELQ 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFDAIKTSAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWGVYQSFLEIGDIKEIA 700 >gi|187477217|ref|YP_785241.1| glycyl-tRNA synthetase beta chain [Bordetella avium 197N] gi|115421803|emb|CAJ48314.1| glycyl-tRNA synthetase beta chain [Bordetella avium 197N] Length = 711 Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 196/698 (28%), Positives = 327/698 (46%), Gaps = 80/698 (11%) Query: 46 YWTPHRLFLYLKGLSPHSPEKI-EERLGPRV------GAGKKAIDGFLRSTGLQTISDCQ 98 Y TP RL ++L + +P++ E+L P G A+ L + GL+ + Sbjct: 52 YATPRRLAVHLSAVLAQAPDQAYAEKLMPAKIGLTEDGKATPALAKKLAAKGLEHLDPAT 111 Query: 99 IKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIR 157 ++++ K D +A P + L+ + AI +P PK MR+ S ++R Sbjct: 112 LERESDGKQDYLIARGTAPGAQLAAGLQEGLEKAIDGLPIPKVMRYQLADGQTS-VKFVR 170 Query: 158 PLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMV 217 P ++ + A+ I+ + + + G T GHRF + + + D Y L +A V Sbjct: 171 PAHRLVALHGAD-----IVPVSVLGLEAGRATLGHRFMSEGDVLIAQADAYEATLAQAQV 225 Query: 218 LLDPECRRNAI----LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLC 273 + E RR I L +A +LA +G + LL+E+ LVE V++G F++++L Sbjct: 226 VASFEKRRAEIESQLLAEAGKLAGTLGDDPAVAA-LLDEVTALVEHPTVYVGQFEEQFLQ 284 Query: 274 LPEELIRLTIKTNQKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLED 332 +P+E + LT++ NQK F + + G L + F++VSN++ ++ I++GN RVV RL D Sbjct: 285 VPQECLILTMRLNQKYFPLFDQQTGKLTHRFLIVSNMRTANP-VNIIEGNQRVVRPRLAD 343 Query: 333 ALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSR 392 A F F D PL R+ L ++V+H K+GTQ ERV R Sbjct: 344 AQFF--------------------FETDRKVPLAARVEPLG--NIVYHNKLGTQLERVER 381 Query: 393 IRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCC 452 +R + + +AQ + +VA DRA +L+KADL + +V EFPELQG +G YA E Sbjct: 382 VRAIARGVAQALGGNVAASDRAALLAKADLSSNMVGEFPELQGIMGAYYAAGDGEPAEVV 441 Query: 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 +A+ + R ++T+ LA++ +TL WAI P+G +DP+ LRRA LG+ Sbjct: 442 EALRSQYRNRYDSPVTADTLTAVTLFLAERAETLTGIWAIGLAPTGERDPFGLRRAALGL 501 Query: 513 IRII--------LENKIDIPLS----------QFIEDQ-------NLILFFHDRLKLYL- 546 I L+ D PLS F + + F ++R + L Sbjct: 502 ISAFEQLAAGGWLKISEDGPLSLNGLLTLAEASFPAGKVPASTLPEVRAFIYERYRNQLI 561 Query: 547 --HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 HDR+ D + A+ P L + + ++ + F + + KRI +L + Sbjct: 562 GEHDRNA-VDAVIALDPP----LHQVAERVRAVTAFGQMPEAASLAAANKRIGNLL---K 613 Query: 605 KKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 K EI E+ P L AE +L + I G + + + L EP++ F Sbjct: 614 KAEGEIG-EVDPARLTDAAEIKLASAIEQLGPQAEAQLAAGDFAANLRTLAQAREPVDAF 672 Query: 665 FDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 F V+V +D +R NRL+LL+ + ++ V ++ ++ Sbjct: 673 FADVMVMAEDPALRANRLALLKQLHGLMNQVADISRLA 710 >gi|284928750|ref|YP_003421272.1| glycyl-tRNA synthetase beta chain [cyanobacterium UCYN-A] gi|284809209|gb|ADB94914.1| glycyl-tRNA synthetase beta chain [cyanobacterium UCYN-A] Length = 712 Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 209/743 (28%), Positives = 357/743 (48%), Gaps = 79/743 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+P +A I+ LK+ + +++ Y TP RL + + GL Sbjct: 3 FLLEIGTEELPTSFVDRAINQWKQIIPTSLKKNFLSSESIFVYGTPRRLAVIITGLLDKQ 62 Query: 64 PEKIEERLGPRVGA----GKK--AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP V A GK A++GFLR ++ I +I+ KKG+ + Sbjct: 63 TDRNELIKGPSVKAAFTEGKPTIALEGFLRKQNVE-IEALEIR-STKKGECVFVDKKIQG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 ++L ++ I + + M+W F + RP++ I+ + ++ KI + Sbjct: 121 IKTTEILPELINAWIGGLEGKRFMKWGNGD-----FKFSRPIRWIVSLCDSQILPIKIEN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I + +YGHR P PI + Y+ L+ A V +DP R N I ND +A Sbjct: 176 GD-SVITSSSFSYGHRVLRPGPINIPHAASYVDILKSAYVEVDPARRYNIIENDIKTIAE 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTRE 296 + +LL+E++ LVE+ +G+F++++L LP+E+I+ + +Q+ F + + Sbjct: 235 NAKGVIDTSHELLKEVVNLVEYPTAILGTFNEEFLELPDEVIKTVMIKHQRYFPIKKISS 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L + FI +SN S I QGN +V+ ARL DA F+ D N Sbjct: 295 NQLLSQFISISNGDPSKS-TIITQGNEKVLKARLSDAQFFYASDSN-------------- 339 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDR 413 + L + +L+ +V F ++G+ +V RI + K+++ Q + V R Sbjct: 340 ------QSLSSYLPKLE--NVTFQKELGSIRNKVDRIINISKQVSNQLQFTPQQIEEVLR 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L KADL T++V EFPELQG +G++YA++ E I +H PRG + +P + Sbjct: 392 TALLCKADLVTQMVYEFPELQGIMGQKYALVSGELEIVAQGIFDHYLPRGHDDQMPKSLT 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 I V +AD+LDTLI + + P+GS DP+ LRRA II I +++ I LS I + Sbjct: 452 GIVVGIADRLDTLIGIFGLGMIPTGSSDPFGLRRAANAIISIAWGSQLSINLSGLISEGC 511 Query: 532 QNLIL--------------FFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLT-----IV 571 Q+ +L FF R++ L D I +DL+ A+L + I Sbjct: 512 QSFLLNNPEQKSPLKSLRNFFAQRIQSLLQDEMGIDYDLVNAVLGDVESEYIERAFQDIT 571 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL---EISPQYLLLE------ 622 DL K +F + + L ++++Q + + ++ +L E SP ++ Sbjct: 572 DLKKRA-QFLQNIRNNGIL---EKVYQTINRSTRLAKQGNLGYEEFSPSVIIDNNLFKKL 627 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREVRD 679 +E++LY + + I + +K Y + L +I ++ FFD VLV ++++V+ Sbjct: 628 SEQQLYDSLINLEPTINFVVTNKDYDLLMKGLINIIPLVDEFFDGKNSVLVMDENQKVKQ 687 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL ++N I+ + +IV Sbjct: 688 NRLNLLGILRNYGRILADFGEIV 710 >gi|307721215|ref|YP_003892355.1| glycyl-tRNA synthetase subunit beta [Sulfurimonas autotrophica DSM 16294] gi|306979308|gb|ADN09343.1| glycyl-tRNA synthetase beta chain [Sulfurimonas autotrophica DSM 16294] Length = 672 Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 198/718 (27%), Positives = 342/718 (47%), Gaps = 74/718 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA K +++ +L++ ++ + Y+TP RL ++ + Sbjct: 6 LIEIGVEELPAVPLLKEMKNIERKYADILEKYSLLSE-FEFYYTPRRLVMWHREFKTGQD 64 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA-VLRKPK 117 + EE G + G KA +GF R G+ K K+ Y V KP Sbjct: 65 DSAEEFFGAPLAVAYKDGTPTKAAEGFARKCGVSLEELSTANKGGKEVLYYKKDVAGKPS 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 ++L I+ ++ + + KSMRW + H S+IRP++ + L + ++ Sbjct: 125 A---ELLPEIIYSWLKSLDFGKSMRWGSLHE-----SFIRPIRWVNVQL-----DDTLVP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + IT HR +P+++ Y L+ V L + R IL D + Sbjct: 172 MYMYGVDSSKITRVHRIANFNPVEITGAKDYFETLKNGGVTLFQQEREEKILGDIKAIEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + D DL E++ + E +GSFD+ +L LP E+I ++K +Q+ F ++G Sbjct: 232 DNSVNVEIDDDLFAEVVAITENPTALLGSFDEAFLRLPPEVIITSMKEHQRYFPV-FKDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++VSN SD + ++ GN RV+ RL D L F+ D N LS+ Sbjct: 291 QLVNKFVVVSN-ALSDDFSEVIAGNERVLRPRLADGLFFYDNDLKN--GLST-------- 339 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD--RAI 415 K L++ V F +G+ +++ R + + + D D RAI Sbjct: 340 -----KGLEK---------VAFFKGLGSVADKIEREEKIADALYDMYQPDAKKEDLNRAI 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E+V EF ELQG +G YA EN + AI+E P G +P+ +S Sbjct: 386 ELAKADLMSEMVYEFTELQGLMGYYYAKEAGENDAVALAIKEQYLPEGEESELPSTPLSA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+++ KLDTL+ +++NE P+GS+DP+ALRRA GIIRI+ E + + + +++ Sbjct: 446 IVAMSIKLDTLLGLFSVNEIPTGSRDPFALRRAVNGIIRIVNEYGFEFDIVKTLKELSKN 505 Query: 532 ------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + L F +R++ Y + +IEA+L + LL + I LN +S Sbjct: 506 YDAIDLEKLENFILERIRRYYK---VNPSIIEAVLASDERELLALGRKIAALNTLVNSEG 562 Query: 586 GEKFLLSAKRIFQILAIEEKKNREIS--LEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 ++ + KR+ I K+ +++ L + EAEK LY + + ES Sbjct: 563 FDEVSSTFKRVANI-----TKDIDLNGDLNVDESLFEEEAEKTLYKRYKEVTSKTYES-- 615 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + D L + +++FFD V+VN +D ++++NR +L+ I IL + +++++ Sbjct: 616 ---YEEELDALLGLKPELDLFFDSVMVNAEDDKIKNNRKALVASIYKSILNIADIKEV 670 >gi|188527791|ref|YP_001910478.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Shi470] gi|238691937|sp|B2UUB6|SYGB_HELPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|188144031|gb|ACD48448.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Shi470] Length = 700 Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 213/738 (28%), Positives = 350/738 (47%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGKIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKAID----------GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V D GF + GL+ Q +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNNEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R+ IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKRKAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPNEIIITSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFNQKSQESPTLHNGFIVVSNAISKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAS 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVVH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERGIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L SA F+ LA I + +N S E E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFFISLFKESQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSTFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|67922573|ref|ZP_00516080.1| Glycyl-tRNA synthetase, beta subunit [Crocosphaera watsonii WH 8501] gi|67855582|gb|EAM50834.1| Glycyl-tRNA synthetase, beta subunit [Crocosphaera watsonii WH 8501] Length = 711 Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 202/726 (27%), Positives = 339/726 (46%), Gaps = 70/726 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA +A I+ L+E + +N+ Y TP RL + + GL Sbjct: 3 FLLEVGTEELPADFIDEAIAQWQQIIPKSLEENFLTPENLEVYGTPRRLAILISGLPEQQ 62 Query: 64 PEKIEERLGPRVGA----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP V A GK KA +GF R + T+ D +I+ KGD + Sbjct: 63 KDRDEVIKGPPVKAAFKDGKPTKAAEGFARKQEV-TLDDLEIRP-TDKGDFVFIEKKIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +++L+ +P I + + MRW + RP++ ++ + E +I++ Sbjct: 121 RQTKEILQESIPNWINSLEGRRFMRWGNGE-----LRFSRPIRWLVALCDQEILPLEIVN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I ++ GHR P + + Y V +DP+ R+ I D ++ Sbjct: 176 GD-STITSDRLSRGHRILHPDTVSIAQAAEYRETFRAVYVEVDPKQRQQIIEKDIETISQ 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + +DLL E+I LVE+ G FD ++L LP E+I + +Q+ F + Sbjct: 235 QLTGTADIPEDLLTEVINLVEYPTAVAGKFDPEFLNLPTEVIITVMVKHQRYFAVKKSAQ 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N + I QGN RV+ ARL DA F+ D Sbjct: 295 ELLPNFITIANGDPNKKDI-IAQGNERVIRARLADAQFFYTSD----------------- 336 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRA 414 +PLD + +L+ +V F ++GT +V RI + ++I++ ++ + ++ Sbjct: 337 ---CDEPLDSYLPQLE--NVTFQKELGTMRYKVDRIMDMAQQISEQLEVREQEQEEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA+ E+ I EH PRG + +P + Sbjct: 392 ALLCKADLVTQMVYEFPELQGIMGQKYALASGESEEVAQGIFEHYLPRGAKDIMPKSLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------- 527 V +AD+LDTLI+ + + P+GS DP+ALRRA II + E ++ I L+Q Sbjct: 452 QVVGIADRLDTLISIFGLGMIPTGSGDPFALRRAANAIITVTWEAELPINLAQLLLQGCQ 511 Query: 528 -FIEDQN--------LILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 F+ D L FF R++ L D +I +DL+ A+L + NLL Sbjct: 512 AFMADHGDKESPLEALQTFFIQRIQNILQDDFNIDYDLVNAVLGEADAEYMERALQNLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRL 627 + D + L E S+ ++ + R ++ A + + E+ + L E +E+ L Sbjct: 572 VKDRSEFLQEIRSNGMLDRIYETINRSTRLAAKGDLEYTELDPSKVVRTELFEKSSEQEL 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVRDNRLSL 684 + + + ++ D Y + + L I + FF D VLV D++ ++ NRL+L Sbjct: 632 FNGLMALVSKTTQAQDEGDYQLLIEGLLDIIPKVSNFFDGEDSVLVMDDNQNIKQNRLNL 691 Query: 685 LQYIKN 690 L ++N Sbjct: 692 LGVLRN 697 >gi|317180185|dbj|BAJ57971.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F32] Length = 700 Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 211/738 (28%), Positives = 353/738 (47%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKCALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQEIKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDHRHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +D++ IV ++ + + KSMRW S+IRP+ +I + ED Sbjct: 125 IHE-KEPTKDLIMPIVLEFLESLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGEDFN 178 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 179 ----DIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVETDRDLLDEVVAITEYPSTLLGEFDKAFLKLPREIIITSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 +++ L N F++VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFSQKSQESSTLHNGFVVVSNAINKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAP 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSAGKIPSGSKDPFALRRLSFGLLKIVAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L +++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L SA F+ LA I + +N S E S E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSTSLFKELQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T E +D K + S+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSAFEGLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|319956464|ref|YP_004167727.1| glycyl-tRNA synthetase beta chain [Nitratifractor salsuginis DSM 16511] gi|319418868|gb|ADV45978.1| glycyl-tRNA synthetase beta chain [Nitratifractor salsuginis DSM 16511] Length = 684 Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 200/725 (27%), Positives = 354/725 (48%), Gaps = 75/725 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K + + +L+E + + +TP RL L + Sbjct: 6 LLIEIGVEELPALPLLKILDRIEASWKKVLQEHQ-LSSDFSFDYTPRRLVLRHNAIPLAQ 64 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-P 116 +++EE +GP V G A +GF R G ++ Q+ + K L R+ P Sbjct: 65 EDRVEELVGPPVEIAIKEGKPTPAGEGFARKCG---VAFEQLDRTHKGNREVLYYRREVP 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 D+L ++ + + + K MRW H +IRP++ + L E + Sbjct: 122 GSQTRDLLPEMIREWVASMNFGKMMRWGDRHD-----EFIRPVRWLQVRLGQES-----V 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +L + G T+ HR + P++V + L++ V L + RR +IL D + Sbjct: 172 PAELFGVASGTRTFVHRMVSFDPVEVPDPAKFEEILQKGEVTLRADERRRSILEDFDTIE 231 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + GL++ D LL+E++ + E + +G+FD+K+L LP E+I ++K +Q+ F E Sbjct: 232 AESGLKIERDGALLDEVVAITEHPKALLGTFDEKFLELPPEVIMTSMKEHQRYFPVFDGE 291 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+N F++VSN ++ + ++ GN RV+ RLEDAL F++ D LK Sbjct: 292 GRLSNHFVVVSN-AVTENYSQVIAGNERVLRPRLEDALFFYRND--------------LK 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----IDADVA--- 409 L + + + ++ +D +GT ++V R R + ++A + ++ + Sbjct: 337 RGLSI-----EGLEKIQFID-----GLGTLKDKVDRERNIALRLAGIYMDKLEQETGRSA 386 Query: 410 -----LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 L+DRA+ L+KADL TE+V EF ELQG +G YA E+ C AI+E +P G Sbjct: 387 LEIEELMDRAVTLAKADLLTEMVYEFTELQGLMGYYYAKALGEDPLVCTAIKEQYRPEGE 446 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI--D 522 +P+ S +++A KLDTL+ +++ + P+GSKDP+ALRRA GIIRI+ + D Sbjct: 447 GAELPSTIFSSILAMAIKLDTLLGLFSVGKIPTGSKDPFALRRAVNGIIRIVTRYDLSFD 506 Query: 523 IP-LSQFIEDQNLILFFHDRLKLYLHDRDIRH-----DLIEAILRPENDNLLTIVDLIKH 576 IP + + + DQ F ++L+ ++ +R + +I A+L ++ I + Sbjct: 507 IPKMMELLADQ-YAPFDEEKLESFILERIYKSLKANPSIIAAVLATGERDVNEIAKKVAA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L + + KR+ I A + + + LE+ P+ E E++L+ T Sbjct: 566 LRAILEQEGARELFTTFKRVANISA---EVDLDGVLEVDPELFEAEEERKLWEAFRR--T 620 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +E D++ Q L ++ ++ FFD VLVN ++ ++R NR +++ I L + Sbjct: 621 REREYGDYQEELQA---LFALKPLLDAFFDSVLVNAEEEKLRLNRQAMVASIYKTFLNIA 677 Query: 697 NVQKI 701 ++++I Sbjct: 678 DLKEI 682 >gi|308062285|gb|ADO04173.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Cuz20] Length = 700 Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 215/738 (29%), Positives = 352/738 (47%), Gaps = 81/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGKIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYF 294 Query: 291 VTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AAFNQKSQESPTLHNGFIVVSNAISKDK-QKIIAGNQKVLKARLSDAVFFYEND------ 347 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--- 403 L KPLD A L+ VVF +GT +++ R ++ + + Q Sbjct: 348 --------------LKKPLDN--APLE--SVVFVQGLGTLKDKMEREAIIAQYLTQKYAS 389 Query: 404 -----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SLNMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQ 449 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 YLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAH 509 Query: 517 --LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLL 568 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 YGLEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERGIV 569 Query: 569 TIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAE 624 I+ +K L F +A+ ++ L SA F+ LA I + +N S E E Sbjct: 570 KIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFFISLFKESQE 626 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 HALFEAFNAIKTSAFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKNF 681 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 LWGVYQSFLEIGDIKEIA 699 >gi|239618467|ref|YP_002941789.1| glycyl-tRNA synthetase, beta subunit [Kosmotoga olearia TBF 19.5.1] gi|239507298|gb|ACR80785.1| glycyl-tRNA synthetase, beta subunit [Kosmotoga olearia TBF 19.5.1] Length = 683 Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 197/723 (27%), Positives = 349/723 (48%), Gaps = 76/723 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EEIPA ++ L LL+++ + Y N++ + R + +KGL Sbjct: 7 LLEIGIEEIPASEVKSIVSQINGRLPNLLEQQRINYSNIKTFIASRRFGVLIKGLPEKQE 66 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK- 117 + +E+ GP + G KA++GFLRS T+ D ++++ KG Y+ + +K + Sbjct: 67 DYYQEKRGPAEKVAFKDGKPTKALEGFLRSNN-ATVDDVEVRE--FKGTSYIFLKKKVEG 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + VL + I + + K MRW ++RP++ ++ + +++++ Sbjct: 124 KKTSLVLSEVFKELIHGLQFKKPMRWGNGEH-----KFVRPVRWLVALF-----DDEVLN 173 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L+L + + +YGHRF IKV S ++Y L+EA+V+ D + R ++N+ R+ Sbjct: 174 LELFDKKASDTSYGHRFFF-DKIKVTS-ENYFETLKEALVIADFDERAQMVINELERIEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + D +L++E+ + E +G F KYL LP+E+I +TI+ +Q+ F EG Sbjct: 232 EKNVTIPRDAELIDEVTCITELPTAVLGKFLPKYLYLPDEVIIVTIRHHQRTFP--VYEG 289 Query: 298 -VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L N F+ + A D + +G V+ ARLEDA HF+ Sbjct: 290 NKLTNSFVAFQDGPA-DPKGNVRRGYEEVINARLEDA-HFY------------------- 328 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDR 413 F D+ KPL+ + L ++F +GT E+ R+R L K IA+ ++A + +DR Sbjct: 329 FERDIQKPLEAYVEYLK--GILFQRGLGTLYEKTQRVRSLSKYIAKQLNAKPVEEEAIDR 386 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L+KADL T +V+EFPELQG +G+ YA+ E+ I+EH + PL VP Sbjct: 387 TALLAKADLTTRVVQEFPELQGIMGRIYALESGESSEVAWGIQEHYE---PLNEVPETLT 443 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 V +AD++DTL+ + + PSGSKDPY LRR I + ++ L + E Sbjct: 444 GAVVGVADRIDTLVGNFLLGNIPSGSKDPYGLRRKLSQIFETMYAFGWNMNLIKLFEKAA 503 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAI-LRPENDNLLTIVDLIKHLNE 579 L F R + +L ++ ++ A+ + +N L +V K ++E Sbjct: 504 DNLGEGYEKISTTLEPFIKSRYEAFLLEKGYSINIARAVSMWWKNPYLGELV--AKAISE 561 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 +K L++ +R+ I + + SL L EAE L+ + I+ Sbjct: 562 IIGRDDFDKLLVAYQRVHNISKKHDSNKFDGSL------FLKEAEVNLFNAYVEALDKIK 615 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ + + L ++ EPI+ +FD+V V ++R NRL L+ + + + ++ Sbjct: 616 KALEKRDFSVALKTLIALKEPIDEYFDEVFVMDSQVDIRLNRLGFLKALDELFFEIADLS 675 Query: 700 KIV 702 ++ Sbjct: 676 YLI 678 >gi|157415497|ref|YP_001482753.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81116] gi|157386461|gb|ABV52776.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni 81116] gi|307748139|gb|ADN91409.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni M1] gi|315932379|gb|EFV11322.1| glycyl-tRNA synthetase beta subunit [Campylobacter jejuni subsp. jejuni 327] Length = 664 Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 198/707 (28%), Positives = 347/707 (49%), Gaps = 83/707 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNVLEEYRLV-NDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRVGAGKKAI--DGFLRSTG---LQT--ISDCQIKKDPKKGDVYLAVL 113 EK E+ +GA K DG L G LQ IS+ ++ KG L Sbjct: 60 ----EKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGISENELTFKEIKGKEVLYHQ 115 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K L +++L ++ ++ + + KSMRW ++F +IR ++SI CIL Sbjct: 116 KAIKGLQSQEILGEMIEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----N 165 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 166 DELVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPNKRKEKILEQF 225 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 226 KLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPGEVIITSMRENQRYFAV 285 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLK 351 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 286 FNDKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGL------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VAL 410 KP +++A++ L+ +GT ++ R + + + Q++ D + Sbjct: 337 -----------KP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIEN 378 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 379 ISTALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPS 438 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLS 526 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L Sbjct: 439 TEFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLE 498 Query: 527 QF------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + + Q L F +RL + + ++A+L +N +L+ I + L E Sbjct: 499 KLSSHYKSFDMQILKDFIFERLYTFY---TVNASFVKAVLSSQNTDLIHINQSVNALIEL 555 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHI 638 + + KR+ I K + + EAE +LY + + Sbjct: 556 SKKDNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQEKTKANSL 608 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 QE +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 609 QEKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|86152952|ref|ZP_01071157.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612141|ref|YP_001000908.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|167005821|ref|ZP_02271579.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|85843837|gb|EAQ61047.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249824|gb|EAQ72783.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 81-176] Length = 664 Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 198/707 (28%), Positives = 347/707 (49%), Gaps = 83/707 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRVGAGKKAI--DGFLRSTG---LQT--ISDCQIKKDPKKGDVYLAVL 113 EK E+ +GA K DG L G LQ IS+ ++ KG L Sbjct: 60 ----EKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGISENELTFKEIKGKEVLYHQ 115 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K L +++L ++ ++ + + KSMRW ++F +IR ++SI CIL Sbjct: 116 KAIKGLQSQEILGEMIEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----N 165 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 166 DELVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQF 225 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 226 KLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAV 285 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLK 351 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 286 FNDKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGL------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VAL 410 KP +++A++ L+ +GT ++ R + + + Q++ D + Sbjct: 337 -----------KP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIEN 378 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 379 ISTALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPS 438 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLS 526 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L Sbjct: 439 TEFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLE 498 Query: 527 QF------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + + Q L F +RL + + ++A+L +N +L+ I + L E Sbjct: 499 KLSSHYKSFDMQILKDFIFERLYTFY---TVNASFVKAVLSSQNTDLIHINQSVNALIEL 555 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHI 638 + + KR+ I K + + EAE +LY + + Sbjct: 556 SKKDNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQEKTKANSL 608 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 QE +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 609 QEKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|206901223|ref|YP_002251032.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus thermophilum H-6-12] gi|238064848|sp|B5YES4|SYGB_DICT6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|206740326|gb|ACI19384.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus thermophilum H-6-12] Length = 689 Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 190/712 (26%), Positives = 345/712 (48%), Gaps = 80/712 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI +EE+PA A + + K + + ++++ + TP RL +Y++ L Sbjct: 4 NFLLEIGTEEMPAHFIDPAIRQMYDFSLEYFKNKKISLESVKIWATPRRLVVYIENLGEK 63 Query: 63 SPEKIEERLGPRVGAGKKAIDG--------FLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + EE GP G K DG F+ G ++ D I++ PK ++L ++ Sbjct: 64 QEAQEEEIRGPAAHIGYK--DGMWTEVAKRFVEQYG-ASLEDLHIEETPKGKYIFLRKVK 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +E +L + ++ + +PK M+W F + RP++ I+ + + Sbjct: 121 EGMNTLE-ILPDYITSLLKSIRFPKMMKWGDVD-----FYFGRPIRWIVALYGDTE---- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I++++ + + RF PI+++ D Y+ + E +++D E R+N IL ++ Sbjct: 171 -IEVEIAGVKSSRYSRPPRFLPQIPIEIRDADSYLNVMRENYIIVDQEERKNEILKQINK 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ L + DLL+E+ LVE+ +G FDKKYL LPE ++ +T++ Q+ F R Sbjct: 230 IANENSFILDYEDDLLKEVNYLVEYPTALLGEFDKKYLALPEVVLIITMEKKQRYFPLRD 289 Query: 295 REGVLANCFILVSNIQASDGGAAIV-QGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L N FI++ N +D IV QGN +V+ ARL DA +++ D + Sbjct: 290 ADGNLTNKFIVIRN--GTDNYKDIVIQGNEKVLKARLSDAEYYYHEDTKH---------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 PL++ +L ++F ++GT ++V R+R+L ++IA ++ + + Sbjct: 338 ----------PLEKYTEKLS--GIIFQEQLGTIKDKVERVRILVREIANILGLSSEENKI 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++R++ L KADL T +V E+PEL G +G+ YA + E + I E++ PR + +P+ Sbjct: 386 LERSVNLYKADLGTLMVSEYPELHGIMGRIYAKISGEKDPIPEVIGEYIYPRTLDDRLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG------------IIRIILE 518 N ++ + +AD++D+L ++A++ P+GS+DP LRR + G +R + Sbjct: 446 NFLASILGIADRIDSLTGYFALDLFPTGSEDPIGLRRISGGLLRLLLESSLKLNLRNLFV 505 Query: 519 NKIDI-------PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +I PLSQ + F RL+ L DR D+++A++ D + + Sbjct: 506 KSFEIYNFGEKYPLSQIDKGMG---FIGQRLRNLLLDR-YSIDIVDAVMEVGYDEMWRLK 561 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + +++F EK + R+++IL + E+S L EK+LY Sbjct: 562 RRLDFISKFKEKESYEKLKKALNRLYRILPKDFTPK-----EVSENLLSSPFEKKLYEDY 616 Query: 632 SDFGTHIQESMDHKRYHQI--GDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 I + Y + D L+ + IE FFD VLV + + R NR Sbjct: 617 LKIKNEIFNDILEGNYEVLLSYDFLNEFSDDIEKFFDNVLVMSPNEDERINR 668 >gi|15611973|ref|NP_223624.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori J99] gi|11135458|sp|Q9ZKM9|SYGB_HELPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|4155477|gb|AAD06479.1| GLYCYL-TRNA SYNTHETASE BETA CHAIN [Helicobacter pylori J99] Length = 701 Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 211/728 (28%), Positives = 348/728 (47%), Gaps = 82/728 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFVKDFPLLTQETKEEFFGP 75 Query: 74 RV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V G A+ GF + GL+ Q K +Y A + K+ +D+ Sbjct: 76 PVKIACNNQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKSNKEVLYHAKIH-AKQPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE- 182 + IV ++ + + KSMRW S+IRP+ +I C+L E D+++KE Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---GENFNDIEIKEY 185 Query: 183 -IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 T HR I+V S Y LE+ V+LDP+ R IL + L + Sbjct: 186 GFKTKQATKAHRQEGFDFIEVDSPKAYFEVLEKNHVILDPKKREAKILQEIKGLEKKHDI 245 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV-----TRTRE 296 + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F ++ Sbjct: 246 IVEVDRDLLDEVVAITEYPTALLGEFDKAFLKLPSEIITTSMKENQRYFAIFNQKSQEES 305 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 306 PTLHNGFIVVSNAISKDK-QKIILGNQKVLKARLSDAVFFYEND---------------- 348 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--------IDADV 408 L KPLD A L+ VVF +GT +++ R ++ + + Q ++ + Sbjct: 349 ----LKKPLDN--APLE--SVVFVQGLGTLKDKMERESIIAQYLTQKYISSLSMPLEKAL 400 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L+ RAI ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 401 ELISRAIQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----LENKIDIP 524 P++ S V+L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II LE + Sbjct: 461 PSSVFSSIVALSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKAD 520 Query: 525 LSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLN 578 L E + F + L+ +L +R D +I ++L +++ I+ +K L Sbjct: 521 LKNLFEKVGVYQSFDLEVLEKFLLERFHNLIDCNLSIIRSVLNTNERDIVKIIQKVKALK 580 Query: 579 EFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 F +A+ ++ L SA F+ LA I + +N S S E L+ + Sbjct: 581 RFLDNPKNAQKKELLFSA---FKRLANINKDRNPNESSGFSTSLFKELQEHALFEAFNAI 637 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 T ES+D K G LH+ P+E +F VLV D E++ NR + L + L Sbjct: 638 KTSTFESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQSFLE 692 Query: 695 VINVQKIV 702 + ++++I Sbjct: 693 IGDIKEIA 700 >gi|238897822|ref|YP_002923501.1| glycine tRNA synthetase, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511926|sp|C4K460|SYGB_HAMD5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229465579|gb|ACQ67353.1| glycine tRNA synthetase, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 689 Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 200/707 (28%), Positives = 324/707 (45%), Gaps = 83/707 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP-H 62 FL+EI +EE+P + E + L L + + + + + TP RL + + LS Sbjct: 6 FLVEIGTEELPPKSLRSLVESFAFYLTQELNKAHLDHGEVTWFATPRRLAVKVACLSTIQ 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KIE+R GP + G KA + RS G+ + D + +Y VL Sbjct: 66 KDQKIEKR-GPAIAQAYDVDGNPTKAATAWARSCGISLDQAKSLVTDKGEWLLYSWVL-- 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L V +A+ ++P K M W I ++RP+ ++ +L +++ Sbjct: 123 PGKSASSLLAEKVKIALSQLPISKLMSWG-----IHEAKFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I + + GHRF ++ D Y + L E+ V+ D R+ I D + Sbjct: 173 ISGIIFGVNSNRKILGHRFMGEPSFIIEHADQYPQILLEKGKVMADFFLRKTQIKTDIEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G +LLEE+ LVEW V F+KK+L +P E + T+K +QK F Sbjct: 233 AAEKIGAIADISDNLLEEVTSLVEWPVVHTAQFEKKFLEVPSEALVHTMKNDQKYFPVYN 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI + D ++ GN +V+ R DA F Sbjct: 293 KSGQLMPYFIFVANILSQDP-PQLIFGNEKVIRPRFADAQFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F DL + L++R+ L ++F ++GT E+V R++ L IA I A+V +A Sbjct: 334 --FETDLKQSLEERLPSLKT--ILFQKELGTLYEKVQRVQALSGWIASQIGANVEYSIKA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EFPE QG +G YA +E AI E +PR +N+P+ ++ Sbjct: 390 GLLSKSDLMTNMVCEFPETQGIMGMHYARYHHEPDEVARAIYEQYQPRFSGDNLPSTLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +V++ADK+DTL + IN+ P G KDP+ LRRA LG++RII+E + + L I + Sbjct: 450 CSVAIADKMDTLTGIFGINQLPKGDKDPFGLRRAALGVLRIIVEKNLPLDLQTLISEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + + D I+A+L I+ + Sbjct: 510 LYGNKLKNSNLIDQIIEFMLGRFRSWYQEAGHGIDSIQAVLARRPTKPADFNARIQAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQIL--AIEEKKNR------EISLEISPQYLLLEAEKRL--YA 629 F + + S KR+ IL +++ KN + EI +LE EK+L + Sbjct: 570 FRTMNEARALCASNKRVSNILSQSLDIPKNSIDTGLLKEPAEIELAQNILELEKKLAPFF 629 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 V + + E L ++ EP++IFF QV+V V D++ Sbjct: 630 VAGLYKDALLE-------------LVALREPLDIFFKQVMVMVPDQD 663 >gi|222823610|ref|YP_002575184.1| glycyl-tRNA synthetase, beta subunit [Campylobacter lari RM2100] gi|222538832|gb|ACM63933.1| glycyl-tRNA synthetase, beta subunit [Campylobacter lari RM2100] Length = 664 Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 192/715 (26%), Positives = 351/715 (49%), Gaps = 74/715 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+E+ +EE+PA K ++S +L+E + + ++TP RL + Sbjct: 4 LIEVGTEELPAIPLLKELPNISQKWEKILQEYH-LEAEFKFFYTPRRLVFIHENFKEKQD 62 Query: 65 EKIEERLG-PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPK-----KGDVYLAVLRKPKR 118 + E +G P+ A K DG L GL + +K++ KG L ++ + Sbjct: 63 DSFVEFIGAPKTIAYK---DGKLTQAGLSFLEKSGLKEEELEFKEIKGKEVLYCQKQVQG 119 Query: 119 L-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 L ++VL ++ ++ + + K+MRW +F +IR ++S+ CIL +++++ Sbjct: 120 LQSKEVLAKMIETFLKSLSFGKTMRWGD-----GSFEFIRAIRSLCCIL-----NDELVE 169 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + T+ HR + I +++D Y + LE+ V+LD E R+ I+ L Sbjct: 170 FESYGVKSAKSTFVHRSVSYDLISFKNIDEYFKILEKNYVILDQEQRKKLIIEQLKTLEK 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + ED +LL E++ + E+ + +G F+K+YL +P E+I +++ NQ+ F + Sbjct: 230 ENDIMISEDDELLAEVVAITEYPKALLGHFEKEYLEIPSEVIITSMRENQRYFAV-FKNN 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N F++VSN D + I+ GN RV+ ARL DA+ FWK D Sbjct: 289 TLSNHFVVVSNAVCKDY-SKIINGNERVLRARLSDAMFFWKND----------------- 330 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIV 416 L Q + + +V+ +GT +++ R + + K+ ++ + + +AI Sbjct: 331 -------LAQGLNNDKISQMVYLEGLGTLKDKIIREQKVATKLCEIFANTQKNEILKAIE 383 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 SKADL T++V EF +LQG +G YA + AI+E P G +P+N+ S Sbjct: 384 YSKADLSTQMVYEFTDLQGIMGSYYAKAMGMSDEIALAIKEQYLPNGDNSAMPSNEFSSI 443 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LA+KLDTL+ ++I + PSG+KDPYALRRA G+++IIL + L F+E Sbjct: 444 VALANKLDTLMGLFSIGKIPSGTKDPYALRRAANGVLKIILALNKNFDLKVFLEAIASEY 503 Query: 531 ---DQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 D ++L F +RL + + I+A+L +N +++ I IK L + + A Sbjct: 504 KSFDLKILLDFILERLYTFY---NANPSFIKAVLSSKNYDIVYIDSCIKALIQSANKADF 560 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + + KR+ I+ + E +I+ + EK LY +Q Sbjct: 561 SQNFATFKRLANIVVLSEA-------QINENLFNTQEEKDLYQAF------MQCKAKENN 607 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + L ++ I+ FFD+V++N D +++NR +L+ I + L + +++++ Sbjct: 608 TQELLESLFALKPQIDAFFDKVMINDKDENIKNNRQALVCAIYHEFLKIADIKEL 662 >gi|289666195|ref|ZP_06487776.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 731 Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 207/766 (27%), Positives = 338/766 (44%), Gaps = 111/766 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFEGVLSGLEKRGVAITRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAAGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P ++L I+ AI +P PK MRW +++ RP++ ++ + E Sbjct: 120 VHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGTE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I+ Sbjct: 175 -----VIPAELLGVRGDRITRGHRFMHEGTVSLAAPGDYVEALRAAHVLVDPDARRTRII 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 EEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NIQ+ D A + +G RV+ R DA F Sbjct: 290 FPVLDDGGKLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L Q M + V + AK+G E+V R+ L + IA I AD Sbjct: 336 -------FDEDLKQGL-QAMGD-GLASVTYQAKLGNVAEKVERVAKLAEMIAPQIGADPV 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 HARRAAQLAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID------- 522 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDVKATL 506 Query: 523 ------IPLSQFI-----EDQNLIL----------------FFHDRLKLYLHDRDIRHDL 555 +P + + +D+ I F DRL+ Y D+ + Sbjct: 507 VIAVKLLPWDRLVRKATLKDEETIAAIDSAQYAQLASEIFDFILDRLRGYYADKGVPATH 566 Query: 556 IEAI-----LRPEN---------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 A+ + PE +L I + F + + E + KR Sbjct: 567 FNAVAALFSVAPEGAPTAHGVGASLGATHGSLYDFDRRIDAIGSFATLPEAEALAAANKR 626 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 I IL K EI +I L AE+ L + +++ Y + L Sbjct: 627 IRNIL---RKVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARLA 683 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ + Sbjct: 684 RLRPQVDAFFDAVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEHL 729 >gi|108563378|ref|YP_627694.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPAG1] gi|122386356|sp|Q1CSQ2|SYGB_HELPH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|107837151|gb|ABF85020.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori HPAG1] Length = 701 Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 212/739 (28%), Positives = 351/739 (47%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L LL + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALLNKRALEAGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP + G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPIKIAFNNEDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IHE-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E +++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNGIEVKEYGFKTKQATKVHRQEGFDFIEVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHDIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPNEIITTSMKENQRYF 294 Query: 291 V-----TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AVFDQKSQEESPTLHNGFIVVSNAINKDK-QKIIAGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 349 ---------------LKKPLDNT----PLESVVFVQGLGTLKDKMEREAIIAQYLTQKYA 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 PSLNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ Sbjct: 450 QYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSAGKIPSGSKDPFALRRLSFGLLKIVA 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L SA F+ LA I + +N S E S Sbjct: 570 VKIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANINKDRNPNESSEFSISLFKELQ 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + T E +D K G LH+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFNAIQTSAFEGLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWGVYQSFLEIGDIKEIA 700 >gi|325997849|gb|ADZ50057.1| Glycyl-tRNA synthetase beta chain [Helicobacter pylori 2017] Length = 701 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 206/727 (28%), Positives = 347/727 (47%), Gaps = 80/727 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFIKDFPLLTQETKEEFFGP 75 Query: 74 RV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V G A+ GF + GL+ Q K +Y A + K+ +D+ Sbjct: 76 PVKIACNHQDKTQGLNALGLGFYQKLGLKDHQCFQTAFKNNKEVLYHAKIH-AKQPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE- 182 + IV ++ + + KSMRW S+IRP+ +I C+L E D+++KE Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---GENFNDIEVKEY 185 Query: 183 -IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 T HR I+V S Y LE+ V+LDP+ R IL + L + + Sbjct: 186 GFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEIKELETKHHI 245 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV-----TRTRE 296 + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F ++ Sbjct: 246 IVEMDRDLLDEVVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQRYFAIFNQKSQEES 305 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 306 PTLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND---------------- 348 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--------IDADV 408 L KPLD A L+ VVF +GT +++ R ++ + + Q ++ + Sbjct: 349 ----LKKPLDN--APLE--SVVFVQGLGTLKDKMERESIIAQYLTQKYASSLNMPLEKAL 400 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 401 ELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----LENKIDIP 524 P++ S V+L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II LE + Sbjct: 461 PSSVFSAIVALSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKAD 520 Query: 525 LSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLN 578 L + + F + L+ +L +R D +I ++L +++TI+ +K L Sbjct: 521 LKNLFQKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIVTIIQKVKALK 580 Query: 579 EFF---SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 F +A+ ++ L SA + ++ I + +N E E L+ + Sbjct: 581 RFLDDPKNAQKKELLFSAFK--RLATINKDRNPNEKSEFFTHLFKEPKEHALFEAFNAIK 638 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 T ES+D K + S+ P+E +F VLV D E++ NR + L + L + Sbjct: 639 TSAFESLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWDVYQSFLEI 693 Query: 696 INVQKIV 702 ++++I Sbjct: 694 GDIKEIA 700 >gi|153952476|ref|YP_001397675.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. doylei 269.97] gi|152939922|gb|ABS44663.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 664 Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 197/709 (27%), Positives = 351/709 (49%), Gaps = 87/709 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELTNIEKKWKNILEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLG-PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPK-----KGDVYLAVLR 114 + E +G P+ A K DG L G + +I ++ KG L + Sbjct: 60 DKQEDSFTEFIGAPKNVAYK---DGVLTPAGQSFLQKAEISENELTFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L +++L ++ ++ + + KSMRW ++F +IR ++SI CIL + Sbjct: 117 ATKGLQSQEILGEMIEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----ND 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K+++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 167 KLVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 227 LIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLKE 352 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 287 NDKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGL-------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 KP +++A++ L+ +GT ++ R + + + Q++ D + + Sbjct: 337 ----------KP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIENI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 380 STALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPST 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQ 527 + S V+LA+KLD+LI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 440 EFSSIVALANKLDSLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEK 499 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + Q L F +RL + + ++A+L +N +L+ I + +N Sbjct: 500 LSSHYKSFDMQILKDFIFERLYTFY---TVNASFVKAVLSSQNTDLIHIN---QSVNALI 553 Query: 582 SSAKGEKF---LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG--T 636 +K + F + KR+ I KN S ++ + EAE +LY + Sbjct: 554 KLSKKDNFNENFTTFKRLANIAT----KN---SHKVDENLFVQEAESKLYKAFQEKTKVN 606 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +QE +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 607 SLQEKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|298736070|ref|YP_003728595.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori B8] gi|298355259|emb|CBI66131.1| glycyl-tRNA synthetase beta chain [Helicobacter pylori B8] Length = 701 Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 213/739 (28%), Positives = 352/739 (47%), Gaps = 82/739 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K+ +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKQPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E +++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNGIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHHIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 +++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 295 AVFSQKSQEESPTLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND----- 348 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-- 403 L KPLD A L+ VVF +GT +++ R + + + Q Sbjct: 349 ---------------LKKPLDN--APLER--VVFVQGLGTLKDKMERESTIAQCLTQKYI 389 Query: 404 ------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 390 SSLNMPLEKALELVKRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKE 449 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII- 516 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 450 QYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIA 509 Query: 517 ---LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNL 567 LE + L E + F + L+ +L +R D +I ++L ++ Sbjct: 510 HYGLEFDLKADLKSLFEKVGVYQSFDLEVLEKFLLERFHNLIDCNPSIIRSVLNTNERDI 569 Query: 568 LTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ +K L F +A+ ++ L SA F+ LA I + +N S S Sbjct: 570 VKIIQKVKALKRFLDDPKNARKKELLFSA---FKRLANINKDRNPNESSGFSISLFKEPE 626 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + T E +D K + S+ P+E +F VLV D E++ NR + Sbjct: 627 EHALFEAFNAIKTSAFEGLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKN 681 Query: 684 LLQYIKNIILIVINVQKIV 702 L + L + ++++I Sbjct: 682 FLWGVYQSFLEIGDIKEIA 700 >gi|307637660|gb|ADN80110.1| Glycyl-tRNA synthetase beta chain [Helicobacter pylori 908] gi|325996260|gb|ADZ51665.1| Glycyl-tRNA synthetase beta chain [Helicobacter pylori 2018] Length = 701 Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 209/728 (28%), Positives = 348/728 (47%), Gaps = 82/728 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFIKDFPLLTQETKEEFFGP 75 Query: 74 RV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V G A+ GF + GL+ Q K +Y A + K+ +D+ Sbjct: 76 PVKIACNHQDKTQGLNALGLGFYQKLGLKDHQCFQTAFKNNKEVLYHAKIH-AKQPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE- 182 + IV ++ + + KSMRW S+IRP+ +I C+L E D+++KE Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---GENFNDIEVKEY 185 Query: 183 -IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 T HR I+V S Y LE+ V+LDP+ R IL + L + + Sbjct: 186 GFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEIKELETKHHI 245 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV-----TRTRE 296 + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F ++ Sbjct: 246 IVEMDRDLLDEVVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQRYFAIFNQKSQEES 305 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 306 PTLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYEND---------------- 348 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--------IDADV 408 L KPLD A L+ VVF +GT +++ R ++ + + Q ++ + Sbjct: 349 ----LKKPLDN--APLE--SVVFVQGLGTLKDKMERESIIAQYLTQKYASSLNMPLEKAL 400 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P + Sbjct: 401 ELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----LENKIDIP 524 P++ S V+L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II LE + Sbjct: 461 PSSVFSAIVALSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKAD 520 Query: 525 LSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLN 578 L + + F + L+ +L +R D +I ++L +++TI+ +K L Sbjct: 521 LKNLFQKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIVTIIQKVKALK 580 Query: 579 EFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 F +A+ ++ L SA F+ LA I + +N E E L+ + Sbjct: 581 RFLDDPKNAQKKELLFSA---FKRLANINKDRNPNEKSEFFTHLFKEPKEHALFEAFNAI 637 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 T ES+D K + S+ P+E +F VLV D E++ NR + L + L Sbjct: 638 KTSAFESLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWDVYQSFLE 692 Query: 695 VINVQKIV 702 + ++++I Sbjct: 693 IGDIKEIA 700 >gi|86150989|ref|ZP_01069205.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315124694|ref|YP_004066698.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842159|gb|EAQ59405.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315018416|gb|ADT66509.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 664 Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 198/707 (28%), Positives = 351/707 (49%), Gaps = 83/707 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRVGAGKKAI--DGFLRSTG---LQT--ISDCQIKKDPKKGDVYLAVL 113 EK E+ +GA K DG L G LQ IS+ ++ KG L Sbjct: 60 ----EKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGISENELTFKEIKGKEVLYHQ 115 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K L +++L ++ ++ + + KSMRW ++F +IR ++SI CIL Sbjct: 116 KAIKGLQSQEILGEMIEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----N 165 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 166 DELVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQF 225 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 226 KLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAV 285 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLK 351 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 286 FNDKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGL------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VAL 410 KP +++A++ L+ +GT ++ R + + + Q++ D + Sbjct: 337 -----------KP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIEN 378 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 379 ISTALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPS 438 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLS 526 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L Sbjct: 439 TEFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLE 498 Query: 527 QF------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + + Q L F +RL + + ++A+L +N +L+ I + +N Sbjct: 499 KLSNHYKSFDMQILKDFIFERLYTFY---TVNASFVKAVLSSQNTDLIHIN---QSVNAL 552 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHI 638 +K + F + ++ I K ++ + Q EAE +LY + + Sbjct: 553 IKLSKKDNFNENFATFKRLANIATKNPHKVDESLFAQ----EAESKLYKAFQEKTKANSL 608 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 QE +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 609 QEKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|71891813|ref|YP_277542.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795919|gb|AAZ40670.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 695 Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 206/735 (28%), Positives = 345/735 (46%), Gaps = 88/735 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +E +P+++ K +D +I K+ +Y + + + RL + + Sbjct: 6 FLVEIGTESLPSKILKKLGKDFFYQIISGFKKNNFVYDKVNWFASSCRL-------AVKA 58 Query: 64 PEKIEERLGPRVGAGKKA-----IDGFLRSTGLQTISDCQIK-----------KDPKKGD 107 I+ + ++ D ++ +T Q + + D Sbjct: 59 NLIIKSDFNTNIACVDQSDTGDTYDKYINNTDTQINHIVNNINIRSGVCVNNVQRTLECD 118 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 + + + K L L I+ A++K+ + MRWS P +IRP++++ +L Sbjct: 119 TNIVIHKNLKYL----LCKIISSALEKLNNYEMMRWSDIDIP-----FIRPVRTVTILL- 168 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRN 226 +I + + YG+R I ++ DHY L + V+ D + R+N Sbjct: 169 ----DTYLIPGYFFGMKTDRVLYGNRCMEDDKITLEHADHYPDVLIKNGWVIADYDIRKN 224 Query: 227 AILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 I ++ + A +G +++ ++K LLEE+ LVEW + G F+ K+L LP E+I +K Sbjct: 225 IICSEIEKEARKLGGVVDVQDEKILLEEVTSLVEWPVILSGQFNNKFLVLPREVILHIMK 284 Query: 285 TNQKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 +QK F V +GVL FI VSN SD I+ G+ V+ RL DA F +D Sbjct: 285 YDQKYFPVYNVIDGVLLPYFIFVSN-TISDNYKKIIAGHENVIIPRLMDAEFFLMQD--- 340 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 N L++ K N V+FH+++GT ++ RI L IA+ Sbjct: 341 --NKCRLEDYIPKLN-----------------SVLFHSRLGTLRDKSWRIAELSGWIAEK 381 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 I D+ RA L K DL + +V EFP QG IG YA+ E+ A +EH +PR Sbjct: 382 IGIDIEQTKRAGYLCKCDLMSNMVFEFPSAQGTIGMHYALRDGESEEIALAQKEHYQPRF 441 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +PT IS VS+ADK+DT+ + + E P G++DP+AL+R+ +GI+RI++ K+ I Sbjct: 442 SKDTLPTTHISCAVSIADKMDTISGIFGVKELPKGNRDPFALKRSAIGILRILMYKKLPI 501 Query: 524 PLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L I+ ++ F ++RL + R + D+I+A+L ++D+++ Sbjct: 502 NLFDLIQKSVKLYGSQLINTTVINDIHHFMYNRLLSWYSSRGYKLDVIKAVLSVKSDSVV 561 Query: 569 TIVDLIKHLNEFFSSAKGE--KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AE 624 I I+ + +FF K E K L KRI IL KN+ IS Q+ LL+ E Sbjct: 562 DIDARIRAVTDFFGLQKEENVKVNLIYKRISNILL----KNK-ISCNEDVQHFLLKIPEE 616 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L + +Q H RY+ + +I + FFD V++ ++ +VR NRL+L Sbjct: 617 ICLAMEVILIEKRLQVLCMHHRYYDALTIAITITSAVNAFFDNVIIMDENEDVRINRLTL 676 Query: 685 LQYIKNIILIVINVQ 699 L +KN+ L V ++ Sbjct: 677 LNKVKNLFLRVADIS 691 >gi|283956628|ref|ZP_06374107.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283791877|gb|EFC30667.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 664 Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 195/706 (27%), Positives = 349/706 (49%), Gaps = 81/706 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRMV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLG-PRVGAGKKAI-----DGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G P+ A K + FL+ G IS+ ++ KG L + Sbjct: 60 DKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAG---ISENELAFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L + +L +V ++ + + KSMRW ++F +IR ++SI CIL + Sbjct: 117 AIKGLQSQKILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----ND 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++D + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 167 ELVDFQSYGVKSAKKTFIHRSVSYDLKDFNNAKEYFELLEKNYIILDPIKRKEKILEQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 227 LIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLKE 352 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 287 NDKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGL-------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 +P +++A++ L+ +GT ++ R + + + Q++ D + + Sbjct: 337 ----------QP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIENI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 380 STALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPST 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQ 527 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 440 EFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEK 499 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + Q L F +RL + + ++A+L +N +L+ I + +N Sbjct: 500 LSSHYKSFDMQILKDFIFERLYTFY---TVNASFVKAVLSSQNTDLIHIN---QSVNALI 553 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHIQ 639 +K + F + ++ I K ++ + Q EAE +LY + +Q Sbjct: 554 KLSKKDNFNENFATFKRLANIATKNPHKVDESLFTQ----EAESKLYKAFQEKTKANSLQ 609 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 E +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 610 EKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|313679910|ref|YP_004057649.1| glycyl-tRNA synthetase, beta subunit [Oceanithermus profundus DSM 14977] gi|313152625|gb|ADR36476.1| glycyl-tRNA synthetase, beta subunit [Oceanithermus profundus DSM 14977] Length = 697 Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 198/735 (26%), Positives = 334/735 (45%), Gaps = 99/735 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI +EE+PA +A DL + L + ++ + Y TP RL L ++GL P Sbjct: 2 NLLFEIGTEELPAAYVPRALADLERLAAERLSAARLDFEAIETYATPRRLALVVRGL-PE 60 Query: 63 SPEKIEE-RLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + ++EE R GP + G A GF R G++ ++D +K G V+ V+ + Sbjct: 61 ASARVEEARRGPPEKAAFKDGKPTPAAAGFARKAGVE-VADLTVKD----GYVWARVVHE 115 Query: 116 PK---RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R++ ++L +V + +P PK M W P ++RP++ ++ L E Sbjct: 116 GEPTARILPELLAGLV----RDLPAPKKMIWGAGDGP-----FVRPVRWLVARLDGE--- 163 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ +++ + G + GHRF P ++V + + Y L +A V+ D RR ++ + Sbjct: 164 --VLPVEVFNVSAGRTSRGHRFLGPDVVEVDA-ETYRDALYDAHVVADVAQRRERVVLET 220 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + G E V +DL+EE+ LVEW MGSF ++YL LP+E++ + +Q+ F Sbjct: 221 ATLALSEGYEAVLPEDLVEEVTHLVEWPVAVMGSFSQRYLELPDEVLATVMIQHQRFFPV 280 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R L N FI VS Q D + + G +V+ R+ DA FW D Sbjct: 281 RVPGERLTNRFIGVSGHQPPDL-SVVRAGYEQVLEGRIYDAYFFWTED------------ 327 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L PL + +L ++ F +GT ++ R+R +K+ + D ++ Sbjct: 328 --------LKTPLTEHHKKLAGIN--FQRGLGTMADKAERVRQAAEKLGGRLGLDEEVLR 377 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L KADL T++V EFPEL+G + + Y Q + A+E+ ++P GP ++P Sbjct: 378 EAAALYKADLPTQMVYEFPELEGVMARAYGEKQGLDPRVARALEDAVRPTGPEASLPETP 437 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 ++ D+ DTL+ F+ + +KPSGS DPY LRRA G++RI+ +PL +E Sbjct: 438 EGALLAALDRADTLVGFFHLGKKPSGSADPYGLRRAAAGLVRILGRTGWALPLEDVLEAA 497 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLI 574 Q F +RL+ L + + + A + P + L+ Sbjct: 498 AEAYRARGLEVSPEAVQAARAFAEERLESLLTEAGLPTLAVRAAQKAPSVYGKMLRARLV 557 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L + A+ + A + E + E P+ E E RL ++ Sbjct: 558 YELMQRPEFAELTRLYKRAANL--------ASQSESTREPDPELFETEEEARLLESLAPT 609 Query: 635 GTHIQESMDHKR-----YHQIGDL----LHSICEP----------IEIFFDQVLVNVDDR 675 + E ++ + L L + EP ++ F D VLV VDD Sbjct: 610 RRAVGELLERGAELLPPWDPAAPLPNVDLAPLTEPLAQILALAGALDPFMDHVLVMVDDA 669 Query: 676 EVRDNRLSLLQYIKN 690 VR+NRL+LL+ +++ Sbjct: 670 AVRENRLALLRGVRD 684 >gi|57238106|ref|YP_179356.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni RM1221] gi|57166910|gb|AAW35689.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni RM1221] gi|315058666|gb|ADT72995.1| Glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni S3] Length = 664 Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 196/706 (27%), Positives = 347/706 (49%), Gaps = 81/706 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLG-PRVGAGKKAIDGFLRSTG---LQT--ISDCQIKKDPKKGDVYLAVLR 114 + E +G P+ A K DG L G LQ IS+ ++ KG L + Sbjct: 60 DKQEDSFAEFIGAPKNVAYK---DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L +++L +V ++ + + KSMRW ++F +IR ++SI CIL + Sbjct: 117 AIKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----ND 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 167 ELVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 227 LIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLKE 352 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 287 NDKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGL-------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 KP +++A++ L+ +GT ++ R + + + Q++ D + + Sbjct: 337 ----------KP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIENI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 380 STALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPST 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--LENKIDIPL---- 525 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L K DI + Sbjct: 440 EFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKKFDIQILLEK 499 Query: 526 ----SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 500 LSNHYKSFDMQILKDFIFERLYTFY---TVNASFVKAVLSSQNTDLIHINQSVNALIKLS 556 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHIQ 639 + + KR+ I K + + EAE +LY + +Q Sbjct: 557 KKDNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQEKTKANSLQ 609 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 E +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 610 EKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|158313955|ref|YP_001506463.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EAN1pec] gi|158109360|gb|ABW11557.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EAN1pec] Length = 1019 Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 197/737 (26%), Positives = 327/737 (44%), Gaps = 93/737 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI +EE+PA + + L+ L + Y +R TP R+ + ++P Sbjct: 313 LLFEIGTEELPAAEVTRQTAAVRAALVERLAATRLTYGELRVQGTPRRIVAIVDDVAPRE 372 Query: 64 PEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ GPR GA KA GF+R G ++D + + +G ++A++R Sbjct: 373 PDVERVVRGPRRSAAYDAQGAPTKAATGFVRGQG-GDVADLTVVE--HRGVEHVALVRTD 429 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL ++ + + ++MRW+ S+ RP++ ++ +L + Sbjct: 430 TGRPATEVLAEVLGAVLGGLRAERNMRWNDPE-----LSFSRPVRWVVALL-----GGAV 479 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + G+ T GHR PI+V Y L E VLLDP RR I+++A +L Sbjct: 480 VPVAASTLAAGSTTRGHRRAGSPPIEVTGAVGYPELLAENSVLLDPAARRELIVDEAAKL 539 Query: 236 AS--AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+ A ++L + D+L+E+ LVE+ + +GSF+ +YL LP E++ + +Q+ R Sbjct: 540 AAEHAGTIDLDTEADVLDEVTNLVEFPRPVLGSFEPRYLDLPAEILTTVMHKHQRYLAVR 599 Query: 294 TREGVLANCFILVSNIQASDGGAAIV----QGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 G L CF+ V++ GA V GN VV AR EDA F Sbjct: 600 DTAGALLPCFVTVAD------GAVDVPLVRAGNEAVVRARFEDAAFF------------- 640 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI---------RVLGKKI 400 F+ DL PL+ A L L F ++G+ +R RI R+ Sbjct: 641 -------FDADLKVPLETFRAGLAKL--TFEQRLGSVADRAERIARLAGLFADRLATSDA 691 Query: 401 AQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 L A+ +DRA L+K DL T++V E L G + +EYA E + A+ E Sbjct: 692 GALSPAERRTLDRAGELAKFDLATQMVIELSSLAGTMAREYARRAGEPEAVAVALHEMEL 751 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR +P ++LAD++D L +A++ P+GS DP+ LRRA LG+ I+ E Sbjct: 752 PRRAGGTLPATVPGALLALADRIDLLAGLFALDAAPTGSSDPFGLRRAALGVTAILAERP 811 Query: 521 -----------------IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + +P+ + +Q F R YL D + H L+ A LRP Sbjct: 812 ELAGITVADMLAEAAKLVPVPVPEAALEQA-DAFVRGRFAQYLLDTGVDHRLVGA-LRPL 869 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 + +K L +A + + R+ +I+ + EIS + P A Sbjct: 870 TGRPGQAMVTLKALRPLVETASFARLAAALGRVRRIVPADVAPGIEISALVDP------A 923 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS---ICEPIEIFFDQVLVNVDDREVRDN 680 + RL +++ + + R + D + + + + ++ FFD VLV DD +R Sbjct: 924 DHRLAQAVTELSRQLA-ARTAGRLPGLDDFVAAAGQLPDAVDGFFDAVLVMADDPALRAA 982 Query: 681 RLSLLQYIKNIILIVIN 697 RL LL I+++ V++ Sbjct: 983 RLGLLAEIRDVAAEVLD 999 >gi|284926458|gb|ADC28810.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni IA3902] Length = 664 Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 197/706 (27%), Positives = 347/706 (49%), Gaps = 81/706 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLG-PRVGAGKKAIDGFLRSTG---LQT--ISDCQIKKDPKKGDVYLAVLR 114 + E +G P+ A K DG L G LQ IS+ ++ KG L + Sbjct: 60 DKQEDSFAEFIGAPKNVAYK---DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L +++L +V ++ + + KSMRW ++F +IR ++SI CIL + Sbjct: 117 AIKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----ND 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 167 ELVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 227 LIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLKE 352 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 287 NDKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGL-------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 KP +++A++ L+ +GT ++ R + + + Q++ D + + Sbjct: 337 ----------KP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIENI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 380 STALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPST 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQ 527 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 440 EFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEK 499 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 500 LSNHYKSFDMQILKDFIFERLYTFYA---VNASFVKAVLSSQNTDLIHINQSVNALIKLS 556 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHIQ 639 + + KR+ I K + + EAE +LY + +Q Sbjct: 557 KKDNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQEKTKANSLQ 609 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 E +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 610 EKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|88596501|ref|ZP_01099738.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|148926232|ref|ZP_01809917.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|218562846|ref|YP_002344625.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88191342|gb|EAQ95314.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112360552|emb|CAL35349.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845403|gb|EDK22496.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|315927143|gb|EFV06494.1| Glycyl-tRNA synthetase beta subunit [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 664 Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 197/706 (27%), Positives = 347/706 (49%), Gaps = 81/706 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLG-PRVGAGKKAIDGFLRSTG---LQT--ISDCQIKKDPKKGDVYLAVLR 114 + E +G P+ A K DG L G LQ IS+ ++ KG L + Sbjct: 60 DKQEDSFAEFIGAPKNVAYK---DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L +++L +V ++ + + KSMRW ++F +IR ++SI CIL + Sbjct: 117 AIKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----ND 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 167 ELVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 227 LIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLKE 352 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 287 NDKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGL-------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 KP +++A++ L+ +GT ++ R + + + Q++ D + + Sbjct: 337 ----------KP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIENI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 380 STALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPST 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQ 527 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 440 EFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEK 499 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 500 LSNHYKSFDMQILKDFIFERLYTFY---TVNASFVKAVLSSQNTDLIHINQSVNALIKLS 556 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHIQ 639 + + KR+ I K + + EAE +LY + +Q Sbjct: 557 KKDNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQEKTKANSLQ 609 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 E +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 610 EKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|269215556|ref|ZP_06159410.1| glycyl-tRNA synthetase, beta subunit [Slackia exigua ATCC 700122] gi|269131043|gb|EEZ62118.1| glycyl-tRNA synthetase, beta subunit [Slackia exigua ATCC 700122] Length = 695 Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 173/584 (29%), Positives = 262/584 (44%), Gaps = 65/584 (11%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 EI +EE+PA H A E L ++ L+ + + + Y TP RL + + P E Sbjct: 8 FEIGTEELPAFALHAATEKLPELVASLMDAAKIPHAGIEAYSTPRRLIAIVHDV-PEKTE 66 Query: 66 KIEERL-GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 EE GP G KA GF R G+ + ++D + AV P Sbjct: 67 ASEETFRGPAAEIAFDAEGKPTKAALGFARGKGVD--ASALERRDENGVEYVYAVKTTPS 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L ++ I + WPKS RW+ S RP++ I+ +L + ++ Sbjct: 125 LDVAGLLSDVLHEVITGIAWPKSQRWAAYREQFS-----RPVRWIVALL-----GDAVVP 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L G TYGHRF AP I+ D + L A V+ R +I + + Sbjct: 175 LSFAGAESGRTTYGHRFLAPAGIEFACADDLVETLCGAFVVPSEAEREASIRSQVQAVEE 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 A GL + E++ L E+ V +G FD+ +L +P+E+I + +Q+ F +G Sbjct: 235 ATGLTADLPARTMAEVVNLTEYPTVMVGGFDELFLKVPKEIIVDAMLVHQRYFPLFNADG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 LAN F++ SN A IV GN RVVAARL DA F+ D Sbjct: 295 TLANKFLITSNGNPK-FEANIVDGNERVVAARLYDAKFFYDED----------------- 336 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI----AQLIDADVALVDR 413 L +PL+ + D+ VVF K+G+ + RI L + + D + A R Sbjct: 337 ---LKRPLEAYVP--DLKHVVFQEKLGSTFAKTVRIERLASFVCDSSSTATDQEKADARR 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL T V EF +QG +G YA E AI +H +PR + +P Sbjct: 392 AAFLCKADLVTGAVVEFTSVQGIMGSYYAKAAGETDEVARAIADHYRPRFSGDGLPQGFA 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------LENKIDIPLS 526 V+ ADKLDT+ +AI++ P+GS DP+ALRR+ +GI+ ++ L +D L+ Sbjct: 452 GRAVAFADKLDTICGLFAIDQAPTGSSDPFALRRSAIGIVGLLNDGLEVSLGAAVDAALA 511 Query: 527 QFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAIL 560 + D + ++ FF R K+ L D + D I+A+L Sbjct: 512 SYETDGLVFDRIEVAEAVVDFFVTRTKVILRDEGVSADAIDAVL 555 >gi|309810962|ref|ZP_07704762.1| glycine--tRNA ligase, beta subunit [Dermacoccus sp. Ellin185] gi|308435116|gb|EFP58948.1| glycine--tRNA ligase, beta subunit [Dermacoccus sp. Ellin185] Length = 1021 Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 196/720 (27%), Positives = 326/720 (45%), Gaps = 88/720 (12%) Query: 4 FLLEIYSEEIPARMQHKA----AEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 F EI EE+P + E ++ L G E G ++ TP R+ + + G+ Sbjct: 336 FAFEIGVEEMPPHVLDATIPAVREAVASALAGTRLEHG----DVAVVGTPRRIVVTVPGV 391 Query: 60 SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S H P+ GP+V GA KA++GF R G+ + D G ++AV Sbjct: 392 SAHEPDSETLAKGPKVAAAYKDGAPTKALEGFARGKGVSVDDVVTAEFD---GAQHVAVK 448 Query: 114 R-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + R + +VL IV + + K+M+W + P FS RP++ ++ + Sbjct: 449 QTQTGRGVLEVLGEIVADVVSGLRSDKNMKW---NDPQLTFS--RPIRWVVALW-----G 498 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + ++ + + G TY R A + V + D + LE A +LDP RR +++ A Sbjct: 499 KHVVPATVGSLTTGRTTYVARTAAQPHVDVAAADELVPTLEAAGFVLDPTARRRQVVDGA 558 Query: 233 HRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA +VG +++ + L++EI LVE +G+F+++YL LPE+++ ++ +Q+ Sbjct: 559 LALAKSVGGTIDIDGEAGLVDEITNLVEEPHGVLGTFEERYLELPEQILTTVMRKHQRYL 618 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 R G L F+ ++N D + GN V+ AR EDA FW+ Sbjct: 619 PVRDASGTLMPYFVTMANGSIDDD--VVRAGNESVLRARYEDAAFFWE------------ 664 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDAD 407 DL PLD A++D L F ++G+ +R RI+ + K+A +L + Sbjct: 665 --------ADLKVPLDDFRAQIDKL--TFENRLGSFAQRADRIKDVSTKLAASVELTGDE 714 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A + RA L+K DL T +V E L G + +EYA+ E + DA+ E KPR ++ Sbjct: 715 QATLSRAGALAKFDLSTAMVVELSSLAGTMAREYALKAGETAAVADALFEMEKPRSAGDS 774 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----------L 517 +P++ ++LAD+ D L +AI KP+GS DP+ALRRA LG++ I+ + Sbjct: 775 LPSSTPGALLALADRFDLLTAMFAIGAKPTGSSDPFALRRAALGVVSILRGVPAVAAISV 834 Query: 518 ENKIDIPLS----QFIEDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + +D + Q +E + +L F R L D + L+ A L P Sbjct: 835 SDGLDAAAARLREQGVEVSDEVLASALEFVEGRFGQQLRDEGVSAALVTA-LSPSAGTPG 893 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 ++ + + +RI +I+ + + S+ L EAEK L Sbjct: 894 RAAAVLADVEALRDDEAFRALVQVTQRITRIVPAGTQPGFDASV------LTDEAEKTLA 947 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++ H +S+ G + EP+ FFD VLV DD ++ RL LLQ + Sbjct: 948 PLVEALPDHSGDSLTQWFADASG-----LTEPLNRFFDDVLVMADDEALKAARLGLLQSV 1002 >gi|311104091|ref|YP_003976944.1| glycyl-tRNA synthetase subunit beta [Achromobacter xylosoxidans A8] gi|310758780|gb|ADP14229.1| glycyl-tRNA synthetase, beta subunit [Achromobacter xylosoxidans A8] Length = 712 Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 192/704 (27%), Positives = 332/704 (47%), Gaps = 85/704 (12%) Query: 43 MRQYWTPHRLFLYLKGLSPHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQTIS 95 M Y TP RL ++L + +P++ E+L P G A+ L + GL+ I Sbjct: 49 MTAYSTPRRLAVHLSAVLAQAPDQPYAEKLMPVKIGLTDDGKATPALQKKLAAKGLENID 108 Query: 96 DCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFS 154 ++++ K D +A + L+ + AI +P PK MR+ +++ Sbjct: 109 LATLERESDGKQDYLVARGTAAGAQLAAGLQEGIDAAINGLPIPKVMRYQLADG-VTSVK 167 Query: 155 WIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-E 213 ++RP ++ + A+ ++ + + G T GHRF + P+ D Y L E Sbjct: 168 FVRPAHGLVALFGAD-----VVPVSALGLAAGRDTLGHRFMSAGPVSFADADAYAATLAE 222 Query: 214 EAMVLLDPECRRNAI----LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDK 269 + V+ E RR+ I L+ A RL + +G + E LL+E+ LVE V++G F++ Sbjct: 223 KGRVMASFEGRRDEIQRQLLDHAGRLNATLGDD-PEVAALLDEVTALVEHPTVYVGQFEE 281 Query: 270 KYLCLPEELIRLTIKTNQKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAA 328 ++L +P+E + LT++ NQK F + G L + F++VSN+ +D IV+GN RVV Sbjct: 282 QFLQVPQECLILTMRLNQKYFPLFDPASGRLTHRFLIVSNMH-TDNPVNIVEGNQRVVRP 340 Query: 329 RLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGE 388 RL DA F++ D+ PL R+ +L +V+H K+GTQ E Sbjct: 341 RLADAQFFFETDRKT--------------------PLAARVEQLG--SIVYHNKLGTQLE 378 Query: 389 RVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN 448 RV R+R + + +A+L+ DV+ DRA +L+KADL + +V EFPELQG +G YA E Sbjct: 379 RVERVRAIARGVAELLGGDVSAADRAAMLAKADLGSNMVGEFPELQGVMGAYYAAGDGEP 438 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSL---ADKLDTLINFWAINEKPSGSKDPYAL 505 S A+ + R + P ++T ++ A++++T++ WAI P+G +DP+ L Sbjct: 439 DSVVQALRTQYRNR---YDAPVTADTLTAAVLFVAERVETMVGIWAIGLAPTGERDPFGL 495 Query: 506 RRATLGIIR------------------IILENKIDIPLSQFIEDQ-------NLILFFHD 540 RRA LG+I + L+ +++ F + + F ++ Sbjct: 496 RRAALGLISAFEQLAAGGWLKISEAGPLSLDGLLELAAGTFPAGKIPADTLPEVRAFIYE 555 Query: 541 RLKLYLHDRDIRHDLIEAI--LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 R + L + + + +EA+ L P + V + +A + KRI Sbjct: 556 RYRNQLIN-EFDRNAVEAVVALTPPLHQVAERVRAAAAFAQLPEAA---SLAAANKRIGN 611 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 +L +K EI ++ L+ AEK L A +S + + + L + Sbjct: 612 LL---KKAEGEIG-AVNDAALVEPAEKALAAAVSALRPKAEAQLAAGDFAGSLSTLAQVR 667 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 EP++ FF V+V +D VR NRL+LL + ++ V ++ ++ Sbjct: 668 EPVDAFFADVMVMAEDPAVRANRLALLSQLHGLMNQVADISRLA 711 >gi|322378481|ref|ZP_08052932.1| glycyl-tRNA synthetase subunit beta [Helicobacter suis HS1] gi|322380322|ref|ZP_08054536.1| glycyl-tRNA synthetase subunit beta [Helicobacter suis HS5] gi|321147257|gb|EFX41943.1| glycyl-tRNA synthetase subunit beta [Helicobacter suis HS5] gi|321149083|gb|EFX43532.1| glycyl-tRNA synthetase subunit beta [Helicobacter suis HS1] Length = 695 Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 208/734 (28%), Positives = 347/734 (47%), Gaps = 85/734 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA+ + L +L+E + Q Y+TP RL LY +P Sbjct: 10 LVEILLEEMPAKPLLQEFMHLKDKWRSVLEEYDLTSQT-DFYYTPTRLVLYAPDFPTETP 68 Query: 65 EKIEERLGPRVGAGKKAIDG---------FLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +E GP + G +DG F + L Q K +V A Sbjct: 69 THTQEHFGPPLNVG---MDGNTLNAIGQNFYQKLHLDPTVALQTATKGAK-EVLYATTTT 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L T++ ++ + + KSM W + +IRP+ +I I ++ Sbjct: 125 PSKQTATLLDTLLLNFLKSLDFGKSMAWGDVRA-----RFIRPIHNICVIF-----NNQV 174 Query: 176 IDLD--LKEIPCGN--ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 IDL ++ C + T H + +K S++HY L+E +VLLDP+ RR IL + Sbjct: 175 IDLSACMQTFACSDKRATKLHFAKSFDYLKTPSVEHYFGVLKEGLVLLDPKERREKILTE 234 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L +E+ + DLLEEII + + G FD K+L LP E+I +++ +Q+ F Sbjct: 235 IRLLEQHHQIEVQINPDLLEEIIAITSYPTALYGQFDAKFLELPAEIITTSMQEHQRYFA 294 Query: 292 TRTREGVLANCFILVSN---IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 T R GVL N FI+VSN I D IV GN +V+ ARL DA+ F+ D Sbjct: 295 T-FRGGVLNNGFIVVSNTPLIHVQDFTEIIV-GNEKVLRARLSDAMFFYYND-------- 344 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDA 406 L+KP + + + + F +G+ +++ R + + + + Q +++ Sbjct: 345 ------------LNKPFNFKQCAHALDQIAFIQGLGSLKDKIKREQQIARYLVQKFMLEI 392 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + V A+ L+K DL +E+V EFPELQG +G YA ++ C AI+E P Sbjct: 393 EEEQVLEALSLAKIDLLSEVVYEFPELQGVMGSYYAKHHGYPLAICMAIKEQYLPTAENT 452 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL- 525 +PT + VSL+ KLD+L++ ++I + P+GSKDP+ALRR+ G++RI L+ +I L Sbjct: 453 PLPTTLLGALVSLSHKLDSLLSLFSIGKIPTGSKDPFALRRSCNGVLRICLQYQIPFNLE 512 Query: 526 SQFIEDQNL------ILFFHDR-LKLYLHD----RDIRHDLIEAILRP-----ENDNLLT 569 S + QNL + D L+ +LH + +L + +L+ + D + Sbjct: 513 SDLLALQNLGYKPFDVKILRDFILERFLHVLSTIPNFYPNLYKGVLQGIETLNQGDYEIC 572 Query: 570 IVDL-IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +D ++ L FF + ++F+ KR+ I ++ + + + P+ + +E L+ Sbjct: 573 QIDAKVRALVAFFEKTQTKEFVAVFKRVANI-----TQDYKDTKPVDPELFIDSSEVDLF 627 Query: 629 AVISDF-GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 TH D + H L ++ EP+E+FFD+VLVN ++ ++ NR LL Sbjct: 628 TAYHQLEATHFDSLQD--KIHA----LFALKEPLEVFFDRVLVNDANQRIQHNRKGLLWL 681 Query: 688 IKNIILIVINVQKI 701 + L V + + Sbjct: 682 VYRAFLGVAEAKAL 695 >gi|205356253|ref|ZP_03223019.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8421] gi|205345858|gb|EDZ32495.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8421] Length = 664 Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 197/706 (27%), Positives = 346/706 (49%), Gaps = 81/706 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLG-PRVGAGKKAIDGFLRSTG---LQT--ISDCQIKKDPKKGDVYLAVLR 114 + E +G P+ A K DG L G LQ IS+ ++ KG L + Sbjct: 60 DKQEDSFAEFIGAPKNVAYK---DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L +++L +V ++ + + KSMRW ++F +IR ++SI CIL + Sbjct: 117 AIKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----ND 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 167 ELVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 227 LIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLKE 352 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 287 NDKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGL-------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 KP +++A++ L+ +GT ++ R + + + Q++ D + + Sbjct: 337 ----------KP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIENI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 380 STALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPST 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQ 527 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 440 EFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEK 499 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + Q L F +RL + + ++A+L N +L+ I + L + Sbjct: 500 LSNHYKSFDMQILKDFIFERLYTFY---TVNASFVKAVLSSHNTDLIHINQSVNALIKLS 556 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHIQ 639 + + KR+ I K + + EAE +LY + +Q Sbjct: 557 KKDNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQEKTKANSLQ 609 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 E +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 610 EKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|290967923|ref|ZP_06559473.1| glycyl-tRNA synthetase, beta subunit [Megasphaera genomosp. type_1 str. 28L] gi|290782062|gb|EFD94640.1| glycyl-tRNA synthetase, beta subunit [Megasphaera genomosp. type_1 str. 28L] Length = 684 Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 202/727 (27%), Positives = 330/727 (45%), Gaps = 76/727 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EE+PA L L+E + + +R TP RL L + + Sbjct: 4 DILLEIGTEEVPAHAMPGILRQLREAAATALQEAHIPFDAVRTVGTPRRLALLVTAAAEM 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 GP G KA GF R GL ++ +++ G V+ V Sbjct: 64 QDAVTTVHKGPSARIAYAADGTPTKAALGFARGLGLD-VTALRVQD----GYVFAEVTHT 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +++P IQ + +P SMRW F +IRP++ ++ + E++ Sbjct: 119 GE-ATKTLLPSLLPALIQHLSFPNSMRWGR-----ETFRFIRPIRWLVALF-----GEEV 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I L + G + GHRF + S Y + +++DP+ R I ++ R Sbjct: 168 IPFTLAGVTTGRRSRGHRFLGDGDFDIPSAQAYEATARDHFLMVDPKERETYIQHELCRE 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRT 294 +A G + D LLEE++ LVE+ V GSFD+ YL LPE +I +K +Q+ F + Sbjct: 228 LAAAGAKQTVDPVLLEEVVYLVEYPTVLCGSFDEAYLQLPEAVIITPMKDHQRYFPMYSA 287 Query: 295 REGVLANCFILVSNIQAS--DGGAAIVQGNSRVVAARLEDALHFWKRD--QNNLPNLSSL 350 G L N F+ V N A D + GN RV+ ARL+DA F+ D Q+ ++ SL Sbjct: 288 ATGRLMNRFLTVRNGDARYLD---TVRHGNERVLRARLDDAKFFFTEDRKQSLWAHVESL 344 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + + F L D+ + RL L V + + LG + AQL Sbjct: 345 RH--IVFQNGLGTLYDKAL-RLQKLTVYLNHSLQ-----------LGLEDAQL------- 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +RA +L+KADL T++V EF ELQG +GKEYA L E+ + A++E PR +++P Sbjct: 384 -ERACLLAKADLSTQMVMEFTELQGVMGKEYAKLDGESEAVAAALQEQYLPRYAGDDLPQ 442 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADK+DTL+ + + + P+GS+DPYALRR T+G++ I+L+ + D ++ ++ Sbjct: 443 TVMGSVLSVADKIDTLVGMFRLGKLPTGSQDPYALRRQTIGVLHILLQRQWDADMATLLD 502 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + L F RLK DR LIE + N + + Sbjct: 503 AAAAGYEAADEAAGDVRKQLEAFIALRLKNIFQDRGHEASLIEGAMAGHPLNAMQGQRRV 562 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L E K E L + R+ ++ + ++ AE+ L+AV Sbjct: 563 EAL-ETARRLKQEDLLQAYTRVGNMV------REDTPTHVTEALFTAAAERDLWAVCRQM 615 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + +L + + I F D V V ++ +R+NRL LL + +I Sbjct: 616 EAALPAVYAAYDFEAALRILRTGMDAIRTFLDTVRVLDENIAIRENRLHLLARVYALIRP 675 Query: 695 VINVQKI 701 +++K+ Sbjct: 676 FGDIRKV 682 >gi|329924044|ref|ZP_08279307.1| glycine--tRNA ligase, beta subunit [Paenibacillus sp. HGF5] gi|328940883|gb|EGG37191.1| glycine--tRNA ligase, beta subunit [Paenibacillus sp. HGF5] Length = 494 Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 168/535 (31%), Positives = 271/535 (50%), Gaps = 62/535 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI EE+PAR A E L L+ L + + + + TP RL ++++ ++ Sbjct: 4 DLLFEIGLEEVPARFLRAAMEQLQDKLVKWLDASRIAHGEVTAFATPRRLAVWVQNVADK 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKK-------GDV 108 + EE GP G KA GF +S G+ DP+ G Sbjct: 64 QEDVSEEVKGPSRKIALDDSGQWSKAALGFAKSQGV----------DPESFTFKELGGVE 113 Query: 109 YLAVLRKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 Y+ V + + + +L + + + +PK+MRW F ++RP+K ++ +L Sbjct: 114 YIYVTKNSVGVDTKSILSEGLLGILTSMTFPKNMRWGAHE-----FKFVRPIKWMVAMLG 168 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 +E +DL++ + GN+T GHRF + + Y L E V++D + R+ Sbjct: 169 SE-----TVDLEITGVKAGNVTRGHRFLGGEAV-IPEASAYRDVLREQHVIVDVDERQEM 222 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I++ LA + DLLEE++ LVE V GSFD +L +P+E++ +++ +Q Sbjct: 223 IVSQIQALAQEKDWNIAIKDDLLEEVLFLVETPTVLYGSFDSSFLHIPQEVLITSMREHQ 282 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F ++G L F+ V + S I +GN +V+ ARL DA F++ DQ Sbjct: 283 RYFPVLDKQGQLLPYFVTVRS-GDSRSLDVIARGNEKVLRARLSDAKFFYEEDQK----- 336 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI-AQL-ID 405 L+ LSK + +VFH ++GT G++V RIR + ++ A+L + Sbjct: 337 -------LQIKDALSK----------LESIVFHEELGTIGDKVRRIRRISDQLSAKLNVS 379 Query: 406 ADVA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD A V RA + K DL T++V EFPELQG +G++YA E A+ EH +PR Sbjct: 380 ADAADSVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEHVAKAVFEHYQPRFA 439 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 ++VP+ + VS+ADK+DT++ ++I P+GS+DPYALRR GI++IILE+ Sbjct: 440 GDSVPSTMVGSIVSIADKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQIILEH 494 >gi|223040748|ref|ZP_03611015.1| glycyl-tRNA synthetase, beta subunit [Campylobacter rectus RM3267] gi|222877938|gb|EEF13052.1| glycyl-tRNA synthetase, beta subunit [Campylobacter rectus RM3267] Length = 677 Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 198/738 (26%), Positives = 344/738 (46%), Gaps = 107/738 (14%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ-------------YWTP 49 + ++EI EE+PA I LKE G + R+ Y+TP Sbjct: 6 ELIVEIGVEELPA--------------IPFLKECGNVAAKWRETLAQNSLDSECEFYYTP 51 Query: 50 HRLFLYLKGLSPHSPEKIEERLG-PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKK--- 105 R+ + + E +G PR A K DG L C I + K Sbjct: 52 RRIAFCHPKFAVRQEDGFSEFIGAPRQVAQK---DGAWTPAALSFAKKCGIDESELKFET 108 Query: 106 -GDVYLAVLRKP--KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSI 162 G + +KP + ++L ++ + + + KSMRW F +IRP++S Sbjct: 109 VGGKEVLYYKKPVAGKPSAELLGDMIEKFLLSLNFGKSMRWGEGK-----FEFIRPVRSF 163 Query: 163 LCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPE 222 LC+L ++++ + ++ G+ + +R V++ Y + + ++LD Sbjct: 164 LCLL-----GDEVVKFNKFDVESGDSIFMYRSVGYDKFTVKNAKDYFAAMPKIGIILDQN 218 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 RR IL++ ++ + G+ + D+ LL+E++ + E +G F++++L +P E+I + Sbjct: 219 ARREKILSEFKQIEAKNGVTVEVDEALLDEVVAITEHPTALLGGFEREFLEVPSEVIITS 278 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-- 340 +K NQ+ F G LAN F++VSN + + A IV+GN +V+ ARL DA+ FW+ D Sbjct: 279 MKENQRYFPV-FESGKLANRFVVVSNAISPEP-ALIVKGNEKVLRARLSDAMFFWRSDLA 336 Query: 341 ----QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL 396 L N++ LKE L D+ L + +R+++I Sbjct: 337 HEFGPEKLKNITYLKE--------LGSTYDKSARELGV------------AKRLAKICAD 376 Query: 397 GKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 K D + AL++R+++LSKADL T++V EF ELQG +G YA + EN + AI+ Sbjct: 377 RLKACAGEDYE-ALLERSVMLSKADLTTQMVYEFTELQGVMGGYYAAAKGENENVVTAIK 435 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 E P G +P+ S V+LA KL+TLI ++ + PSG+KDPYALRRA G+I+II Sbjct: 436 EQYLPSGEASALPSTIFSSVVALAIKLETLIGLFSAGKIPSGNKDPYALRRAANGVIKII 495 Query: 517 LENKIDIPLSQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 ++ ++ F+ + + LI F DRL + D+ +++A L + + Sbjct: 496 QNENLNFDIAAFLRETAEGYAKFDVEALIGFIFDRLYTFF---DVNPSVVKACLASKKGD 552 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 +L + I+ L ++ + + KR+ I+ K+ + + E+EK+ Sbjct: 553 VLAQCEAIEALGAICAAEDFRQNFSTFKRLANII-----KDENFGV-VDEAKFENESEKK 606 Query: 627 L---YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 L + G E + + L + I+ FFD V++N +D VR NRL+ Sbjct: 607 LNDAFKAAVKAGGSYSERLKN---------LFGLKAAIDEFFDNVMINAEDELVRKNRLA 657 Query: 684 LLQYIKNIILIVINVQKI 701 L+ I L + ++++I Sbjct: 658 LVGQIYAEFLKIADIKEI 675 >gi|32266566|ref|NP_860598.1| glycyl-tRNA synthetase subunit beta [Helicobacter hepaticus ATCC 51449] gi|32262617|gb|AAP77664.1| glycyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 703 Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 212/736 (28%), Positives = 347/736 (47%), Gaps = 92/736 (12%) Query: 5 LLEIYSEEIPA-----RMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 L+EI++EE+PA + H + I ++ I Y+TP R+ LY + Sbjct: 21 LIEIFTEELPALPFLKELPHMVEKWQKI------AQKHRITSTPTLYFTPRRIVLYEQNF 74 Query: 60 SPHSPEKIEERLGPRVGAG----------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 + H+ + + E GP + KA + F + L T + +I+ K +Y Sbjct: 75 ATHTQDILIESYGPPLAIAFINGDKTKGLSKAGESFFKKLELPTNTPYEIRIKENKEVLY 134 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A ++K + +D++ I+ ++ + + KSM W + S+IRP+++I +L Sbjct: 135 YAKMQKGVQ-TKDIVGEILIEWLKALQFGKSMFWGNLNE-----SFIRPVRNIFILL--- 185 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 E+ + + + TY HR + P + S Y + LE++ V+L+ RR IL Sbjct: 186 --GEQSVSFNAFGLHSIAQTYPHRDISFEPYAITSPSDYFQSLEKSKVILEQNKRRAMIL 243 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + S +++ D+ LL EI+ + E+ + G FDK++L LP E+I ++K NQ+ Sbjct: 244 EQIVVIESQENIKVEIDEALLNEIVAITEYPRAAYGIFDKQFLQLPNEVIITSMKENQRY 303 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F T ++G L N F+LV+N A++ G IVQGN +V+ ARL DA+ F++ D N + Sbjct: 304 FATY-KDGHLHNGFVLVANSTAANLGP-IVQGNQKVLKARLSDAVFFYENDLKN--GFAP 359 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL---GKKIAQLIDA 406 K + F L LD+ T+ E V + +L KI I Sbjct: 360 EKLGQILFVDGLGSLLDK-----------------TKRESVIALELLKFYTHKIDMKIQE 402 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 ++ A+ +KADL TE+V EF ELQG IG YA + AI+E P G Sbjct: 403 SQEILSTAVKYAKADLLTEMVYEFTELQGIIGYYYAQSFGMHPLVAQAIKEQYLPTGEDS 462 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P++ +S ++L+ KLD + ++I++ PSGSKDP+ALRRA G+I+II +D LS Sbjct: 463 PLPSHILSAILALSIKLDNIFALFSIDKIPSGSKDPFALRRAANGVIKIIWHYGLDFDLS 522 Query: 527 QFIED------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-----NLLT 569 I Q + FF +RL+ L + LI +L + NL T Sbjct: 523 IDIPRLYQAGGYKPSNMQRIESFFLERLEGML---KVNPSLIRCVLNARVNNAKVRNLNT 579 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ I+ L+ FF + + + KR+ IL + I I L E LY Sbjct: 580 IIHNIEALSAFFEKSDKQSLITLFKRVANIL-----NDDIIPTHIDESLLSFPQEIALYQ 634 Query: 630 VISDFGTHIQESMDHKRYHQIGD---LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + +++ K + I + L S+ EP+E FF VLVN +D ++ NR L+ Sbjct: 635 AL--------KALKAKEFKDISEHIATLFSLKEPLEAFFASVLVNDNDNAIKTNRQMLIL 686 Query: 687 YIKNIILIVINVQKIV 702 I N L + +++ I Sbjct: 687 SIYNEFLRIGDIKDIT 702 >gi|86150570|ref|ZP_01068793.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85838921|gb|EAQ56187.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] Length = 664 Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 196/706 (27%), Positives = 346/706 (49%), Gaps = 81/706 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLG-PRVGAGKKAIDGFLRSTG---LQT--ISDCQIKKDPKKGDVYLAVLR 114 + E +G P+ A K DG L G LQ IS+ ++ KG L + Sbjct: 60 DKQEDSFAEFIGAPKNVAYK---DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L +++L +V ++ + + KSMRW ++F +IR ++SI CIL + Sbjct: 117 AIKGLQSQEILGEMVEKFLKSLSFGKSMRWGA-----NSFEFIRAIRSIACIL-----ND 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 167 ELVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 227 LIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSSLKE 352 +G L+N FI+VSN + I+ GN RV+ ARL DA+ F++ D QN L Sbjct: 287 NDKG-LSNHFIVVSN-AVCKNYSKIIHGNERVLRARLSDAMFFYQNDLQNGL-------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 KP +++A++ L+ +GT ++ R + + + Q++ D + + Sbjct: 337 ----------KP--EKLAKMTYLE-----GLGTMQDKSLREIKIAEILCQMLHNDKIENI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ Sbjct: 380 STALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPST 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQ 527 + S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 440 EFSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEK 499 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 500 LSNHYKSFDMQILKDFIFERLYTFY---TVNASFVKAVLSSQNTDLIHINQSVNALIKLS 556 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHIQ 639 + + KR+ I K + + EAE +LY + +Q Sbjct: 557 KKDNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAFQEKTKANSLQ 609 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 E +++ L ++ I+ FF+QV++N +D ++++NR +L+ Sbjct: 610 EKLEN---------LFALKPFIDEFFNQVMINAEDEKLKNNRQALV 646 >gi|309807579|ref|ZP_07701531.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 01V1-a] gi|308169185|gb|EFO71251.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 01V1-a] Length = 544 Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 179/586 (30%), Positives = 285/586 (48%), Gaps = 68/586 (11%) Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 MRW ++RP+ I+ + +E KI+D I G TYGHRF + Sbjct: 1 MRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKILD-----IVAGRKTYGHRFLGESLV 50 Query: 201 KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWV 260 S D Y L+ V+ D R+N IL+ + L ++ D LLEE+ LVE+ Sbjct: 51 LATS-DDYESALKSQFVIADANQRKNMILSQINSLCEKNNWQVKIDSGLLEEVTNLVEYP 109 Query: 261 QVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQ 320 +F GSF++KYL +P+E++ ++K NQ+ F EG L N FI + N SD ++ Sbjct: 110 TIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDHEGTLINHFIAIRN-GNSDYLDNVIA 168 Query: 321 GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFH 380 GN +V+ ARL+DA F+ D+ PL + +L V FH Sbjct: 169 GNEKVLVARLDDAQFFYDEDK--------------------KYPLSHFVEKLS--SVSFH 206 Query: 381 AKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 KIG+ E++ R++++G+ I + I+ +++A DRA + K DL T +V EF ELQG + Sbjct: 207 DKIGSMAEKMLRVKLIGEYIGKKINLSSSELADFDRAADIYKFDLVTNMVGEFAELQGIM 266 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA L E + AI+E P ++P KI +S+ADKLDT+I F+ P+ Sbjct: 267 GTHYAELAGERKAVSQAIKESYLPSSADGDLPITKIGSLLSIADKLDTIIAFFGAGMIPN 326 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--------------------F 537 S DPYALRR+ GI+RI++ +I + ++D +L F Sbjct: 327 SSNDPYALRRSAYGIVRILINQSWNISIEDALKDIIALLKGKTVAKLPNDEATQAEISDF 386 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 +R+K L + +D+I+ +L N+ I+ + L E +K +K + S R+ Sbjct: 387 IINRVKQLLQVKKYSYDVIDTVLASNQQNVANILSIADILQENHDDSKFKKVVESLTRVA 446 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR-YHQIGDLLHS 656 IL +K + + +I+P +EK LY I+ + +S+D K Y + L Sbjct: 447 NIL---KKADFSEAGQINPDLFENNSEKALYDKIN---LLLDKSLDVKTLYSEFVQLQPV 500 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 I E +FD ++ + V+ NRLS L+ I + L ++ K+V Sbjct: 501 IDE----YFDSNMILDKNEAVKINRLSQLKLIDKLALEFGDLSKLV 542 >gi|238028590|ref|YP_002912821.1| glycyl-tRNA synthetase subunit beta [Burkholderia glumae BGR1] gi|237877784|gb|ACR30117.1| Glycyl-tRNA synthetase beta subunit [Burkholderia glumae BGR1] Length = 699 Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 201/683 (29%), Positives = 328/683 (48%), Gaps = 61/683 (8%) Query: 45 QYWTPHRLFLYLKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQ--TIS 95 +Y TP RL + + + +P++ + E++ P G + L + G T++ Sbjct: 52 RYATPRRLAVVITNVRAVAPQRQVREKVLPVSVALDAAGQPTAPLAKKLAALGHPNLTVA 111 Query: 96 DCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSW 155 D + +D K + + P + D L+ + + K+P PK M + + + Sbjct: 112 DLERAQD-GKAEAFFVNYSAPGATLADGLQAALDETLAKLPIPKVMTYQRPDG--TDVQF 168 Query: 156 IRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EE 214 +RP+K + + ++ + I G+ T GHRF + + + S Y L E+ Sbjct: 169 VRPVKRLTVL-----HGTHVVPVSAFGIDAGDTTLGHRFLSDGLVAIGSASRYADTLREK 223 Query: 215 AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCL 274 V+ RR +I A G +V + LL+E+ LVEW V+ F+ ++L + Sbjct: 224 GRVIAHFADRRESIRTALAEHAG--GDAVVMPEWLLDEVNALVEWPVVYACKFEDEFLQV 281 Query: 275 PEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDAL 334 P+E + LT++TNQK F G L + F++VSNI+ + A I+ GN RVV RL DA Sbjct: 282 PQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETATP-AEIIDGNERVVRPRLADAK 340 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F++ D+ PL R+ RL +VV+H K+G+Q RV RI Sbjct: 341 FFFETDKKT--------------------PLVDRVPRL--ANVVYHNKLGSQLARVERIE 378 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 L ++IA + AD AL RA L+KADL T++V EFPELQG +G YA E A Sbjct: 379 SLAEQIAPAVGADAALARRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEADEVAVA 438 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 EH +PR + +P +S V+LADKL+T++ W I P+G KDP+ALRR LG++R Sbjct: 439 CTEHYQPRFSGDALPAAPVSTAVALADKLETIVGIWGIGLAPTGEKDPFALRRHALGVLR 498 Query: 515 IILENKIDIPLSQFI--------------EDQNLIL-FFHDRLKLYLHDRDIRHDLIEAI 559 +++E ++ + L + E + I FF DRL+ L +R I+A+ Sbjct: 499 LLVEKQLPLDLRGLLRTTYASFAGIAGVAESTDAIYAFFLDRLRGLLRERGYSTGEIDAV 558 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L E + ++ + + EF A+ + KRI IL +K E+ L Sbjct: 559 LGLEPSRVDDLIARLDAVREFTRLAEAGALAAANKRISNIL---KKSEGGAPGEVDAALL 615 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 AE+ L A ++ +Q + + Y L ++ P++ FF+ V+VN +D +R Sbjct: 616 AEAAEQALAAELAQVAPRVQAQLAARDYTGALSALAALRAPVDTFFNDVMVNAEDPALRA 675 Query: 680 NRLSLLQYIKNIILIVINVQKIV 702 NRL+LL + + V ++ K+ Sbjct: 676 NRLALLGALHQQMNCVADISKLA 698 >gi|297380170|gb|ADI35057.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori v225d] Length = 674 Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 206/699 (29%), Positives = 330/699 (47%), Gaps = 81/699 (11%) Query: 42 NMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKKAID----------GFLRSTGL 91 N+ ++TP RL L +K + E EE GP V D GF + GL Sbjct: 18 NIEIFYTPRRLCLLVKDFPLLTQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGL 77 Query: 92 QTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPIS 151 + Q K +Y A + K +D++ IV + + + KSMRW Sbjct: 78 KDHQHFQTAFKNNKEVLYHAKIH-AKEPTKDLIMPIVLEFLGGLNFGKSMRWGNVEK--- 133 Query: 152 AFSWIRPLKSILCILVAEDAKEKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYI 209 S+IRP+ +I C+L E +++KE T HR I+V S Y Sbjct: 134 --SFIRPIHNI-CVLFN---GENFNGIEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYF 187 Query: 210 RDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDK 269 LE+ V+LDP+ R IL + L + + + DKDLL+E++ + E+ +G FDK Sbjct: 188 EVLEKNHVILDPKKREAKILQEIKELETKHHIIVEIDKDLLDEVVAITEYPSALLGEFDK 247 Query: 270 KYLCLPEELIRLTIKTNQKCFVTRTREG----VLANCFILVSNIQASDGGAAIVQGNSRV 325 +L LP E+I ++K NQ+ F ++ L N FI+VSN + D I+ GN +V Sbjct: 248 AFLKLPNEIITTSMKENQRYFAVFNQKSQESPTLHNGFIVVSNAISKDK-QKIIAGNQKV 306 Query: 326 VAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGT 385 + ARL DA+ F++ D L KPLD A L+ VVF +GT Sbjct: 307 LKARLSDAVFFYEND--------------------LKKPLDN--APLE--SVVFVQGLGT 342 Query: 386 QGERVSRIRVLGKKIAQL--------IDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 +++ R ++ + + Q ++ L+ RA+ ++KADL +E+V EF ELQG + Sbjct: 343 LKDKMEREAIIAQYLTQKYASSLNMPLEKAFELIGRAVRIAKADLLSEVVYEFSELQGIM 402 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G YA+ QNEN +++E P +P++ S V+L+ KLD+L + ++ + PS Sbjct: 403 GYYYALKQNENELVALSVKEQYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSAGKIPS 462 Query: 498 GSKDPYALRRATLGIIRII----LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR--- 549 GSKDP+ALRR + G+++I+ LE + L E + F + L+ +L +R Sbjct: 463 GSKDPFALRRLSFGLLKIVAHYELEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNN 522 Query: 550 --DIRHDLIEAILRPENDNLLTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IE 603 D +I ++L ++ I+ +K L F +A+ ++ L SA F+ LA I Sbjct: 523 LIDCNPSIIRSVLNTNERGIVKIIQKVKALKRFLDDPKNAQKKELLFSA---FKRLANIN 579 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + +N S E S E L+ + T ES+D K G LH+ P+E Sbjct: 580 KDRNPNESSEFSISLFKESQEHALFEAFNAIKTSAFESLDSKIEAYFG--LHA---PLEE 634 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +F VLV D E++ NR + L + L + ++++I Sbjct: 635 YFKSVLVMDKDIEIQKNRKNFLWGVYQSFLEIGDIKEIA 673 >gi|291276980|ref|YP_003516752.1| glycyl-tRNA synthetase subunit beta [Helicobacter mustelae 12198] gi|290964174|emb|CBG40019.1| glycyl-tRNA synthetase beta chain [Helicobacter mustelae 12198] Length = 688 Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 207/739 (28%), Positives = 353/739 (47%), Gaps = 94/739 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 + + +EI+ EE+PA + ++ + L+ + + ++TP R+ L+ + Sbjct: 2 VSELFIEIFVEELPALPFLREFKNFATKWQEALQRHSIPPIQTQFFYTPRRIVLFCEQFP 61 Query: 61 PHSPEKIEERLGPRVGA----GKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 + E+ +E GP V G K A + FL+ LQ C +K K +V Sbjct: 62 IRTQEEKKEIFGPPVDVAFEKGDKNAPLTAAGEAFLKKNHLQIEQLCYAQKGGK--EVLF 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 ++ + + ++L I+ +Q + + K MRW +IRP+++I+ L Sbjct: 120 SLQVQEGVSLTEILPQILKSFLQSLHFGKHMRWGNVTE-----DFIRPIRNIMIFL---- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E+ + I T HR +V++ Y + L E V+LD E RR IL+ Sbjct: 171 -GEEFVPFVGYGIEARPQTKLHRDFGLDWQEVKNFADYCKKLNEGGVILDQEERREKILS 229 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 L + + + D +LL+E++ + E+ QV +G F++++L LP+E+I ++K NQ+ F Sbjct: 230 SIISLEKSQNIAVEVDGELLDEVVAITEYPQVILGHFEERFLELPKEVIITSMKENQRYF 289 Query: 291 VTRTREGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNL 347 + + L N F++VSN + D G IV GN +V+ ARLEDA+ F+ D + L N Sbjct: 290 AVYQDKSLQHLKNHFVMVSNSTSKDEGI-IVLGNQKVLRARLEDAMFFYHNDCKKGLSN- 347 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-- 405 A L+ L +F G+ ++V R + + + + Q D Sbjct: 348 ----------------------AGLEKL--LFIEGAGSMQDKVKREQKIAEFLIQRFDCQ 383 Query: 406 ---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 A A + I LSKADL +E+V EF LQG +G YA++ ++ S I+E P Sbjct: 384 ELSAKKAQILECIELSKADLLSEMVYEFSNLQGVMGYYYALVIKKDPSIALGIKEQYLPL 443 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 G +P+ S V+LA K D ++ +++ + P+GSKDP+ALRRA GI+RIIL+ D Sbjct: 444 GEHSALPSTPFSAIVALAHKFDNILTLFSVGKIPTGSKDPFALRRAANGILRIILQESFD 503 Query: 523 IPLSQ------------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L Q + Q + FF +R+ L L++++L +N+ I Sbjct: 504 FDLEQDLAKMLRILDLDLSQTQKIATFFIERMDGLLQQ---NRALLKSVLATNEENICRI 560 Query: 571 VDLIKHLNEFFSSAKGEKFLLSA--KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 D L E F+ E+ L A KR+ IL K++ EIS + L+ EAE+ LY Sbjct: 561 FDKAHALGEIFTGDGIEQGELVATFKRVANIL-----KSKIPLGEISQELLIEEAEQTLY 615 Query: 629 AVISDFGTHIQESMDHKRYHQIGDL---LHSIC---EPIEIFFDQVLVNVDDREVRDNRL 682 DF + ++ GD L ++C ++ FFD+V+VNV++ ++ NR+ Sbjct: 616 ---HDF-------LQVCAKNESGDYLIRLKNLCGLKGSLDDFFDKVMVNVENPALKQNRI 665 Query: 683 SLLQYIKNIILIVINVQKI 701 L+ +I L + ++++I Sbjct: 666 QLIAHIYEEFLQIADIKEI 684 >gi|325917986|ref|ZP_08180153.1| glycyl-tRNA synthetase beta chain [Xanthomonas vesicatoria ATCC 35937] gi|325535809|gb|EGD07638.1| glycyl-tRNA synthetase beta chain [Xanthomonas vesicatoria ATCC 35937] Length = 743 Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 165/541 (30%), Positives = 262/541 (48%), Gaps = 54/541 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ G V + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVLAGLEKRGIAVTRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P +L I+ AI +P PK MRW +++ RP++ L +L Sbjct: 120 VHRAVTPGAQTAALLPDILREAIAAMPIPKPMRWGAHD-----YAFARPVQ-WLVLLFGN 173 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +I +L + IT GHRF + + + +YI L A VL+D E RR I+ Sbjct: 174 D----VIPAELLGVRGDRITRGHRFMHEGEVSLAAPGNYIDALRSAHVLVDAEARRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 EEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NI++ D A + +G RV+ R DA F Sbjct: 290 FPVLDDGGKLTEQFIGIANIESKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 336 -------FDEDLKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADPV 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L I Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKGLI 506 Query: 530 E 530 + Sbjct: 507 Q 507 >gi|218197396|gb|EEC79823.1| hypothetical protein OsI_21278 [Oryza sativa Indica Group] Length = 1068 Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 188/715 (26%), Positives = 341/715 (47%), Gaps = 72/715 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P +A + L LI +L++ + + +R Y TP RL + ++ L+ Sbjct: 386 FVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRLSHGKVRSYGTPRRLAVVVENLNMKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP V G KA +GF R + D ++ K + A +++ Sbjct: 446 MEEEIELRGPPVAKAFDQEGRPTKAAEGFCRKNNVPI--DSLYRRTDGKTEYIYARVKES 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++VL +P I + +PKSMRW+ S + RP++ I + + I+ Sbjct: 504 ARFADEVLTEDLPTIISGISFPKSMRWN------SNIVFSRPIRWIFAL-----HGDLIV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN + G R + KV++ + Y+ LE+A +L+D + R+ IL+D+ LA Sbjct: 553 PFCFAGISSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQERKQRILHDSSILA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTR 295 VG +++ L++E+I LVE +G +D +L LP++++ ++ +QK F VT Sbjct: 613 EGVGGDIIAPDSLVQEVINLVEAPMPIIGRYDVSFLALPKDVLITVMQKHQKYFPVTSKT 672 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L CFI V+N + + +GN V+ AR EDA F+K D Sbjct: 673 MGNLLPCFITVANGAIKE--EVVRKGNEAVLRARYEDAKFFYKMDTQK------------ 718 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 LS+ DQ + ++FH ++GT +++ R+ ++A L+ + + + Sbjct: 719 ----KLSEFRDQ------LSSILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIK 768 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T IV EF L G + + YA+ + +A+ E PR + P Sbjct: 769 DAAALAMSDLATNIVTEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTD 828 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--- 529 I +++ D+LD+L+ + +PS + DP+ LRR + G+++I++ENK + L++ + Sbjct: 829 PGIVLAVTDRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLV 888 Query: 530 -EDQ----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 E+Q ++ F RL+ L D I +++ ++L + + Sbjct: 889 AEEQPITIDSGVIDEVVQFVTRRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEME 948 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISPQYLLLEAEKRLYAVISDFGT 636 F + K + + R +I+ + +EI +LE+ + E+ L++ + Sbjct: 949 AFSRTEDFPKIVEAYSRPTRII-----RGKEIGSALEVDASVFEKDEERALWSAYLEVAD 1003 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 I +D K + D + +P+E FF V V +D +VR+NRL+LL + ++ Sbjct: 1004 KIHPGVDIKAF---ADASLELLQPLEDFFTNVFVMAEDEKVRNNRLALLTKVASL 1055 >gi|115465888|ref|NP_001056543.1| Os06g0103600 [Oryza sativa Japonica Group] gi|55296761|dbj|BAD67953.1| putative aminoacyl-t-RNA synthetase [Oryza sativa Japonica Group] gi|113594583|dbj|BAF18457.1| Os06g0103600 [Oryza sativa Japonica Group] gi|222634809|gb|EEE64941.1| hypothetical protein OsJ_19814 [Oryza sativa Japonica Group] Length = 1068 Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 188/715 (26%), Positives = 341/715 (47%), Gaps = 72/715 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P +A + L LI +L++ + + +R Y TP RL + ++ L+ Sbjct: 386 FVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRLSHGKVRSYGTPRRLAVVVENLNMKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP V G KA +GF R + + D ++ K + A +++ Sbjct: 446 MEEEIELRGPPVAKAFDQEGRPTKAAEGFCRKNNV--LIDSLYRRTDGKTEYIYARVKES 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++VL +P I + +PKSMRW+ S + RP++ I + + I+ Sbjct: 504 ARFADEVLTEDLPTIISGISFPKSMRWN------SNIVFSRPIRWIFAL-----HGDLIV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN + G R + KV++ + Y+ LE+A +L+D + R+ IL+D+ LA Sbjct: 553 PFCFAGISSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQERKQRILHDSSILA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTR 295 VG +++ L++E+I LVE +G +D +L LP++++ ++ +QK F VT Sbjct: 613 EGVGGDIIAPDSLVQEVINLVEAPMPIIGRYDVSFLALPKDVLITVMQKHQKYFPVTSKT 672 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L CFI V+N + + +GN V+ AR EDA F+K D Sbjct: 673 MGNLLPCFITVANGAIKE--EVVRKGNEAVLRARYEDAKFFYKMDTQK------------ 718 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 LS+ DQ + ++FH ++GT +++ R+ ++A L+ + + + Sbjct: 719 ----KLSEFRDQ------LSSILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIK 768 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T IV EF L G + + YA+ + +A+ E PR + P Sbjct: 769 DAAALAMSDLATNIVTEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTD 828 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--- 529 I +++ D+LD+L+ + +PS + DP+ LRR + G+++I++ENK + L++ + Sbjct: 829 PGIVLAVTDRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLV 888 Query: 530 -EDQ----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 E+Q ++ F RL+ L D I +++ ++L + + Sbjct: 889 AEEQPITIDSGVIDEVVQFVTRRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEME 948 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISPQYLLLEAEKRLYAVISDFGT 636 F + K + + R +I+ + +EI +LE+ + E+ L++ + Sbjct: 949 AFSRTEDFPKIVEAYSRPARII-----RGKEIGSALEVDASVFEKDEERALWSAYLEVAD 1003 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 I +D K + D + +P+E FF V V +D VR+NRL+LL + ++ Sbjct: 1004 KIHPGVDIKAF---ADASLELLQPLEDFFTNVFVMAEDERVRNNRLALLTKVASL 1055 >gi|188574648|ref|YP_001911577.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519100|gb|ACD57045.1| glycyl-tRNA synthetase, beta subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 745 Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 161/541 (29%), Positives = 263/541 (48%), Gaps = 54/541 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ G V + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P ++L I+ AI +P PK MRW +++ RP++ ++ + E Sbjct: 120 VHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLFGNE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + Y+ L A VL+DP+ RR I+ Sbjct: 175 -----VIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 EEVEAAAKQAGGSACISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NIQ+ D A + +G RV+ R DA F Sbjct: 290 FPVLDDGGTLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L Q M + V + AK+GT ++V+R+ L + IA + AD Sbjct: 336 -------FDEDLKQGL-QAMGD-GLASVTYQAKLGTVADKVARVAALAEVIAPQVGADPL 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI++ +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDQAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L++ + Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLTELL 506 Query: 530 E 530 + Sbjct: 507 K 507 >gi|58584021|ref|YP_203037.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428615|gb|AAW77652.1| glycyl-tRNA synthetase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] Length = 745 Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 161/541 (29%), Positives = 263/541 (48%), Gaps = 54/541 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ G V + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P ++L I+ AI +P PK MRW +++ RP++ ++ + E Sbjct: 120 VHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLFGNE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + Y+ L A VL+DP+ RR I+ Sbjct: 175 -----VIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 EEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NIQ+ D A + +G RV+ R DA F Sbjct: 290 FPVLDDGGTLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L Q M + V + AK+GT ++V+R+ L + IA + AD Sbjct: 336 -------FDEDLKQGL-QAMGD-GLASVTYQAKLGTVADKVARVAALAEVIAPQVGADPL 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI++ +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDQAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L++ + Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLTELL 506 Query: 530 E 530 + Sbjct: 507 K 507 >gi|166714071|ref|ZP_02245278.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzicola BLS256] Length = 752 Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 174/601 (28%), Positives = 285/601 (47%), Gaps = 63/601 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ G V + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 PE+ E LGP + G KA+ GF G+ + + D KG+ ++ Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTA-LERTGD-AKGERFVHRAV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P ++L I+ AI +P PK MRW +++ RP++ ++ + E Sbjct: 125 TPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLFGNE----- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I +L + IT GHRF + + Y+ L A VL+DP+ RR I+ + Sbjct: 175 VIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRIVEEVEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 AAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NIQ+ D A + +G RV+ R DA F Sbjct: 295 DGGTLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFF------------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 F+ DL + L Q M + V + AK+GT ++V+R+ L + IA + D RA Sbjct: 336 --FDEDLKQGL-QAMGD-GLASVTYQAKLGTVADKVARVAALAEVIAPQVGTDPLQARRA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ + + Sbjct: 392 AELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDIALSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + ++ Sbjct: 452 KVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDVDLRELLKRALN 511 Query: 533 -------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL-----TIVDLIKHLNEF 580 N F LKL+L D I + + PE ++ + TI DL + +E Sbjct: 512 AAYNALINSAPFEVKALKLHLGDSGIVAEEL-----PEENSAIHARRFTIPDLAPNSSEL 566 Query: 581 F 581 + Sbjct: 567 Y 567 >gi|210633032|ref|ZP_03297632.1| hypothetical protein COLSTE_01540 [Collinsella stercoris DSM 13279] gi|210159319|gb|EEA90290.1| hypothetical protein COLSTE_01540 [Collinsella stercoris DSM 13279] Length = 696 Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 195/724 (26%), Positives = 327/724 (45%), Gaps = 79/724 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+P+ + A + L +++ L E G+ + ++R +P RL + ++ Sbjct: 6 DFLFEIGVEEMPSAPLNNAVKQLKVLVAKGLDEAGLSHGDVRIVSSPRRLAALVSDVAEA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G KA +GF R GL T ++ ++D + A Sbjct: 66 TEEIHSVLRGPSAKIAFDADGNPTKAAEGFARKNGL-TAAELIRREDTDGTEYVFAEQNT 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P +L + I ++ WP +S RW + +++RP++ I C+ + Sbjct: 125 PSEPAAPMLARMAEAVIAQIEWPNYRSQRWGAERA-----TFVRPIRWICCLF-----GD 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ ++ G T GHR +P +V Y + LE A VL E R + I Sbjct: 175 DVVEVRYADVVSGRTTRGHRVLSPGEHEVACPAVYEQVLESAHVL-SAERRESVIREGIA 233 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++ + +G+ + + +E++ L EW V +G FD+++L +P E+I ++ +NQ+ F T Sbjct: 234 QVEAELGVHVDTPAKVFDEVVNLCEWPTVLVGHFDEEFLAVPSEIICESMLSNQRYFPTY 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L F++VSN + ++ GN RVV ARL DA F+ D Sbjct: 294 DAQGNLTRAFVVVSNADPA-VSETVIDGNERVVRARLYDAKFFYDED------------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL- 410 LK +L+ R+A+ V F K+GT ++ R+ L IA+ I AD A Sbjct: 340 -LKIDLE---EFRSRLAK-----VGFQKKLGTVLQKSERMEDLALAIAREARIGADAASD 390 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL + V EF QG +G YA E AI +H +PR + +P Sbjct: 391 AQRAAHLAKADLVSSAVVEFTSQQGVMGGYYAAAAGEAPEVAAAIRDHYRPRFAGDALPE 450 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------LENKIDI 523 V++ADKLDT+ +AI E P+GSKDP+ALRR+ +G++ I+ E +D Sbjct: 451 GTAGCIVAVADKLDTIAGMFAIGEPPTGSKDPFALRRSAIGVLNILRDRLGCGYEALVDA 510 Query: 524 PLSQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L + E ++ F R++ D I D + A+ +L Sbjct: 511 ALDAYAEQGLEFDKAEVAASVCAFIKGRMEQMARDEKIAPDTVAAVSAGSVTTPAHYFEL 570 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-----NREISLEISPQYLLLEAEKRLY 628 L E + + F LA + + + E+ + LL +AE+ L Sbjct: 571 AHAL---------EHARANDRAAFDNLATAYARAAHLADASVGCEVD-EALLGDAERVLL 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 I + ++ + + + L ++ EPI+ FFD+V+V +D +R NRL+LL Sbjct: 621 ETIDAAEASVASALSAQDFPGVISALAALREPIDAFFDEVMVMDEDERLRTNRLALLNRF 680 Query: 689 KNII 692 + Sbjct: 681 AAVF 684 >gi|118475036|ref|YP_892001.1| glycyl-tRNA synthetase subunit beta [Campylobacter fetus subsp. fetus 82-40] gi|118414262|gb|ABK82682.1| glycyl-tRNA synthetase, beta subunit [Campylobacter fetus subsp. fetus 82-40] Length = 671 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 198/722 (27%), Positives = 342/722 (47%), Gaps = 81/722 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA + ++ +L E G+ + +Y TP R+ + + P Sbjct: 4 LIEIGVEELPAIPFLRELNNIKPKWKQVLDEYGLDSKFNLEY-TPRRIVI-----NGDIP 57 Query: 65 EKIEERLGPRVGAGKKAI--DGFLRSTGLQTISDCQIKKD-------PKKGDVYLAVLRK 115 E + +GA K DG + L C I +D K +Y + K Sbjct: 58 ELTPDLEVENIGAPKSVALQDGKWNAAALGFAKKCGISQDELGFKEIKGKEVLYHKSVIK 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K L+ D+L ++ I + + KSMRW + +IRP++S++ IL EK Sbjct: 118 GK-LVSDLLPAMIEKFILSLNFGKSMRWGNGE-----YEFIRPIRSLISIL-----GEKS 166 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D ++ + Y HR I S+D Y + + ++L R+ IL++ + Sbjct: 167 LDFEIFGVKSKKAFYPHRNFGYDMIDFSSIDEYFELVRKNGIILSATQRKEKILDEFKTI 226 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + L++ D DLL+E++ + E+ +GSF+K++L +P E+I ++K NQ+ F Sbjct: 227 ETKNNLKIELDFDLLDEVVAITEYPTALLGSFEKEFLEVPSEVIITSMKENQRYFPLHNA 286 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L+N F++VSN +D I++GN +V+ ARL DA FW D Sbjct: 287 DGKLSNHFVVVSN-AITDDHNLIIRGNEKVLRARLSDAKFFWHSD--------------- 330 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL----- 410 L + + ++ + ++G+ ++ R R + + +A + D D+ Sbjct: 331 ---------LASEFSSEKLKNITYLNELGSMYDKELRERQIARILASIYDKDLRYEFGGD 381 Query: 411 ----VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +DRA++LSKADL T +V EF LQG +G YA ++EN AI+E P L Sbjct: 382 YADELDRAVMLSKADLTTNMVYEFTNLQGVMGGYYAAYRDENPFIIGAIKEQYLPNANL- 440 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 P S V++++KLDTL+ ++I + PSG+KDPYALRRA GII+I+L I+ L Sbjct: 441 -YPKTLFSSLVAISNKLDTLMGLFSIGKIPSGNKDPYALRRAASGIIKIVLNLGINFDLR 499 Query: 527 QFIE--DQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + N F + L+ ++++R D+ +I+A L +L + I L+E Sbjct: 500 NILNLIKPNYKNFDLNYLESFVYERLYSIYDVNPSVIKACLNSSQSDLKRLNAAIIALDE 559 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + KR+ I+ K+ EI+ E++ + E L +I Sbjct: 560 ICKMKDFKDNFSTFKRLSNII-----KDSEIA-EVNESLFEEDVENELNNKFKALNLNID 613 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D K Y + L + I++FFD V++N D+ +++ NR+S++ I L V +++ Sbjct: 614 ---DTKTYLES---LFGLKNSIDLFFDSVMINHDNPKIKANRISIIGQIYKAFLKVADIK 667 Query: 700 KI 701 +I Sbjct: 668 EI 669 >gi|84625799|ref|YP_453171.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369739|dbj|BAE70897.1| glycyl-tRNA synthetase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 745 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 161/541 (29%), Positives = 263/541 (48%), Gaps = 54/541 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ G V + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P ++L I+ AI +P PK MRW +++ RP++ ++ + E Sbjct: 120 VHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLFGNE 174 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + Y+ L A VL+DP+ RR I+ Sbjct: 175 -----VIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 EEVEASAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NIQ+ D A + +G RV+ R DA F Sbjct: 290 FPVLDDGGTLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L Q M + V + AK+GT ++V+R+ L + IA + AD Sbjct: 336 -------FDEDLKQGL-QAMGD-GLASVTYQAKLGTVADKVARVAALAEVIAPQVGADPL 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI++ +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDQAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L++ + Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLTELL 506 Query: 530 E 530 + Sbjct: 507 K 507 >gi|157413188|ref|YP_001484054.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9215] gi|157387763|gb|ABV50468.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9215] Length = 719 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 213/763 (27%), Positives = 373/763 (48%), Gaps = 107/763 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA H + ++ + + + TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPANFSHYVLNQFKSQIEFEFDKKLIKFDKISCTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++I R GP+ G KA GF S G+ + D +I+ K V+ +R Sbjct: 61 DSGDDEIIIRKGPKASSAYINGTPTKAAVGFANSLGID-VDDLEIENTEKGEFVFGKKVR 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + L I+P I+ + P+ M+W + F + RP++ ++ I ++ Sbjct: 120 KGES-TRISLSLIIPKVIKSLQGPRFMKWGNGN-----FKFSRPIRWLVSIY-----NDE 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+D +L E I GN++ HR I++ S D+Y L E VL+ E R+ ILN Sbjct: 169 ILDFNLDECDPKIVVGNLSKSHRL-IDRVIEINSPDNYFEILAENGVLVQREERKEKILN 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 ++ + ++ L+ +LL E+ LVE+ V G F++++L LP E++ + +K++Q+ Sbjct: 228 FINQSSESLNLKPDLSDELLNELTDLVEFPNVITGKFEEEFLDLPVEVLSMVMKSHQRYV 287 Query: 291 -----------VTRTREGVLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + + E +++ F+L+SN +Q S+ IV+GN +V+ AR DA F + Sbjct: 288 PLLKKSDSFSKLDLSSEQIISTNFLLISNGLQESNN--IIVKGNEKVLKARFSDAKFFVE 345 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 D+ +SS +R +L + + ++G +RV RI + + Sbjct: 346 SDKK----VSS----------------SERNEKLK--SISYLKEMGNVFQRVKRIEAISQ 383 Query: 399 KIAQLIDADVALVDRAIV----LSKADLCTEIVREFPELQGKIGKEYAVLQNENIS--CC 452 KI ++ D +L + I+ K DLC+EIV EFPELQG +G +Y L+NE C Sbjct: 384 KILNYLN-DQSLDSKKIIEAAKYCKNDLCSEIVYEFPELQGIMGGKY--LRNEGFDKDIC 440 Query: 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 A+ EH P +++P+ K +S++DK++TLI+ + ++PSGS DPYALRR G+ Sbjct: 441 IAVAEHYLPCFYKDDLPSTKYGAIISISDKIETLISIFISGKRPSGSSDPYALRRNLNGV 500 Query: 513 IRII--------LEN---------KIDIPLSQFIEDQ---NLILFFHDRLKLYLHDRDIR 552 I II +EN +I +P +F +++ +LI F + R+ +L + I Sbjct: 501 ILIIWQFELDLAIENMFCELFQYWEISLPNLKFEKEKVLIDLIEFTNQRIVSHLEELSID 560 Query: 553 HDLIEAIL------RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 DLI+A+ R + N+L + + IK +N+ + F K I ++ + EK Sbjct: 561 KDLIKAVCLIDSASRKKIMNILDLKNRIKTINKL---KEKTNFSEIQKVISRVCKLAEKG 617 Query: 607 NREISL-----EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 + + ++ I+P+ + E +++ I T I S+ + Y ++ L + + Sbjct: 618 SLKTNIFLHKDHINPKLFEKDCEIKVFEFIKQLETII--SLPNWDYFRLFKLFETNANSL 675 Query: 662 EIFFDQ---VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FD VL+ +D E+R+NRL+LL ++N L + + KI Sbjct: 676 NELFDNDKGVLIMAEDSEIRNNRLNLLGLVRNYSLKIADFTKI 718 >gi|224437212|ref|ZP_03658193.1| glycyl-tRNA synthetase subunit beta [Helicobacter cinaedi CCUG 18818] gi|313143677|ref|ZP_07805870.1| glycyl-tRNA synthetase beta chain protein [Helicobacter cinaedi CCUG 18818] gi|313128708|gb|EFR46325.1| glycyl-tRNA synthetase beta chain protein [Helicobacter cinaedi CCUG 18818] Length = 696 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 218/755 (28%), Positives = 352/755 (46%), Gaps = 124/755 (16%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ-------------YWTPHR 51 L+EI +EE+PA + LLKE I Q + Y+TP R Sbjct: 8 LIEILTEELPA--------------LPLLKELPHIIQKWQSIAKKHNVSSTPTLYYTPRR 53 Query: 52 LFLYLKGLSPHSPEKIEERLGP----------RVGAGKKAIDGFLRSTGLQTISDCQIKK 101 L LY +G H+P+ + E GP + KA + F + L + + + Sbjct: 54 LVLYEEGFLAHTPDSLIESYGPPLSIAYIDGDKTKGLSKAGESFYKKNNLPLEQELETRI 113 Query: 102 DPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKS 161 K +Y A+ +K +L+++V + + + KSM W +IRP+++ Sbjct: 114 KDNKEVLYYAITQKGVE-TSSLLESMVVEWLHSLQFGKSMFWGDVEQ-----GFIRPVRN 167 Query: 162 ILCILVAEDAKEKIIDLDLKEIPCGNIT--YGHRFHAPHPIKVQSLDHYIRDLEEAMVLL 219 IL +L E+ I ++ G + HR + P K+ S++ Y L++ V+L Sbjct: 168 ILILL-----GEQSICVNAFNRHFGKQAQIFVHRDVSFEPFKITSIEQYFDTLQKNFVIL 222 Query: 220 DPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 + R+ IL+ L SA +++ D DLL EI+ + E+ Q GSFD +L LP E+I Sbjct: 223 SQDKRKELILSQIAELESAHKIQVEIDTDLLNEIVAITEYPQAAYGSFDSSFLALPSEVI 282 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 ++K NQ+ F T ++ VL N F+LVSN A D + IVQGN +V+ ARL DA+ F++ Sbjct: 283 ITSMKENQRYFATY-KDSVLHNGFVLVSNSTAKDL-SPIVQGNQKVLKARLADAMFFYEN 340 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D LK+ F +L L+Q +VF +G+ ++ R L Sbjct: 341 D---------LKKG---FTPEL---LEQ---------IVFVENLGSLLDKSKRESALANA 376 Query: 400 IAQLI-----------DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN 448 + + D ++ +A +KADL TE+V EF ELQG +G YA + Sbjct: 377 LLESFAPALDSIDMPKDEARQILTQATKYAKADLLTEMVYEFTELQGVMGYYYAKNFCFH 436 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRA 508 AI+E P G +P++ +S ++L+ KLD + ++I++ PSGSKDP+ALRRA Sbjct: 437 PLVALAIKEQYLPTGEDSALPSHILSAILALSIKLDNIFALFSIDKIPSGSKDPFALRRA 496 Query: 509 TLGIIRIILENKIDIPL-----------SQFIEDQNLI-LFFHDRLKLYLHDRDIRHDLI 556 G+I+II +D L I D I FF +RL+ L I +I Sbjct: 497 ANGVIKIINHYDLDFDLLSDMPRLYQAGGYKISDMKRIEQFFIERLEGALK---INPSII 553 Query: 557 EAILRPEND-----NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR--E 609 ++L+ + NL I+ K LN FF + + + KR+ IL+ E K E Sbjct: 554 RSVLKARVNNKRVLNLKNIIRNTKALNAFFEKSDKQALVSLFKRVANILSDEIKPTHIDE 613 Query: 610 ISLEISPQYLLLEAEKRL--YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 L++ + L +A K L A+ +D + I L S+ EP+E FF+ Sbjct: 614 SLLKLPQEIALFQALKSLKSQALTADVDSQITA-------------LFSLKEPLEAFFNS 660 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 VLVN ++ ++ NR L+ + + L + ++++I Sbjct: 661 VLVNDENNAIKTNRQMLVFSVHSEFLRIGDMREIT 695 >gi|21244927|ref|NP_644509.1| glycyl-tRNA synthetase subunit beta [Xanthomonas axonopodis pv. citri str. 306] gi|21110642|gb|AAM39045.1| glycyl-tRNA synthetase beta chain [Xanthomonas axonopodis pv. citri str. 306] Length = 745 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 163/536 (30%), Positives = 262/536 (48%), Gaps = 54/536 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ L ++ L++ G V + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQALFDGVLSGLEKRGIAVARGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDARGQPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P D+L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 120 VHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF--- 171 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I+ Sbjct: 172 --GTAVIPAELLGVRGDRITRGHRFMHEGAVSLAAPGDYVDALRAAHVLVDPDARRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 ++ A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 DEVQAAARQAGGSARIGDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NIQ+ D A + +G RV+ R DA F Sbjct: 290 FPVLDDGGTLTEQFIGIANIQSKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 336 -------FDEDLKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEIIAPQVGADPL 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 QARRAAALAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSL 502 >gi|328955469|ref|YP_004372802.1| glycyl-tRNA synthetase beta chain [Coriobacterium glomerans PW2] gi|328455793|gb|AEB06987.1| glycyl-tRNA synthetase beta chain [Coriobacterium glomerans PW2] Length = 698 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 205/734 (27%), Positives = 337/734 (45%), Gaps = 82/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L+E+ EE+PA ++A ++ L + G+ + +R P R+ + + ++ Sbjct: 5 DYLIELGCEELPAHPLYRACAQFGDLIERGLADAGLAHGPVRTLCAPRRMAVIVADVAAA 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP GA KA +GF R +T +D ++ D + V+L V Sbjct: 65 TEEVCQSLRGPAAAIAFDSTGAPTKAAEGFARGRNART-ADLVVRDDGGRDYVFLDVW-C 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R D+L VP AI +V WP+S RW + RP++ ++ +L + + Sbjct: 123 PPRSARDILADAVPSAIARVSWPRSQRWGRRPE-----RFARPIRWLVSLL-----GDTV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G T G R P ++ D Y R LE+A V++D RR+ I H + Sbjct: 173 VPFSFAGVEAGRRTRGLRVLGVEP-ELSCADAYERTLEDAGVIVDARRRRDIIERGVHEI 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +G + + EE++ LVE+ +V GSFD+ +L +P E+I ++ +NQ+ F Sbjct: 232 ERDLGARADMPRKVFEEVVNLVEYPRVLRGSFDEAFLDVPHEIICDSMLSNQRYFPLYDE 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+LV+N S I+ GN RVV ARL DA F+ Sbjct: 292 HGRLTRNFVLVANTPLS-AEREIIAGNERVVRARLFDAKFFY------------------ 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 + DL PL+ ARL+ V F ++G+ ++ RI L +IAQ D A Sbjct: 333 --DEDLDVPLETLRARLER--VGFQKRLGSLLQKSDRIERLAARIAQRAGFDAQRTADTC 388 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +KADL + V EF QG +G YA E AI +H +PR + +P Sbjct: 389 RAARFAKADLVSAAVVEFTSQQGVMGGYYARAAGEPEEVAVAIRDHYRPRFAGDALPETV 448 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 I V++ADKLDT+ +A +E P+GS DPYALRRA + I I + + I L+ IE+ Sbjct: 449 IGAAVAIADKLDTIAGIFAADEAPTGSSDPYALRRAAI-GIIAIARDTLPIDLAPLIEEA 507 Query: 533 NLILFFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK--- 588 L+ Y + D +EA +R N L V +++ +A+ Sbjct: 508 ---------LRGYAEQGVEFDFDAVEAAIRSFIANRL--VGVVREEGAAPDTARAVASVG 556 Query: 589 FLLSAKRIFQILAIEEKK--NREISLEISPQY------------------LLLEAEKRLY 628 + A I + LA++E + +R+ +++ Y L+ AE L Sbjct: 557 VISPADFIDRCLALDEAREHDRDTFEDLAVAYARASHIADPSLGIECDRALMGTAEIELL 616 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + D + ++ + Y + L ++ P++ FF++VLV +DR +R+NRL LL Sbjct: 617 LAVDDERAVVSRALRDRDYARSFSALAALRVPVDRFFEEVLVMDEDRSLRENRLKLLNRF 676 Query: 689 KNIILIVINVQKIV 702 + V ++ ++ Sbjct: 677 VAVFSDVADIGELA 690 >gi|33861316|ref|NP_892877.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33633893|emb|CAE19218.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 720 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 202/751 (26%), Positives = 350/751 (46%), Gaps = 99/751 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+P++ H ++ ++ ++ + + N+ TP R+ L+L+GL Sbjct: 1 MSKYLLEIGTEELPSKFSHSVINQINSLIEFEFDKKIIKFNNIICTSTPRRIVLFLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 H+ +K R GP+ G A GF S G+ TI D +I+ + +KG+ Sbjct: 61 DHADDKTVIRKGPKANSAFLNGIPTNAAIGFANSLGI-TIDDLEIR-ETEKGEFVFGTKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + L +I+P I+ + P+ M+W +F + RP++ I+ + ++ Sbjct: 119 EKGESTRSSLSSIIPKVIKNLQGPRFMKWGG-----GSFKFSRPIRWIVSLY-----NDE 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+D + E I GN + HR I++ S D+Y + + V + E R+ I+N Sbjct: 169 ILDFEFNECDPKISIGNTSKSHRL-INKVIEIHSPDNYFELMAKNGVFVKREERKKEIVN 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ--- 287 ++ + V LE +LL E+ LVE + +FDK++L LP E++ +K +Q Sbjct: 228 LINQESQLVNLEPDLSDNLLNELTDLVESANLLTSNFDKQFLNLPVEVLSTVMKNHQRYI 287 Query: 288 ------KCF--VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 K F + + E V++ F ++SN + I +GN +V+ AR DA F + Sbjct: 288 PLLKKNKTFSKLDLSSEKVISTNFFVLSN-GLRESNNIISKGNEKVLRARFSDAKFFVES 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K S SK ++++ + L +G +RV RI +K Sbjct: 347 DK---------KVS--------SKERNEKLKTVSYL-----KGMGNVFQRVKRIEATSEK 384 Query: 400 IAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENIS--CCDA 454 I ++ D + A K DLC+EIV EFPELQG + +Y L+NE S C A Sbjct: 385 ILNYLNDQSLDTEKIKEAAKYCKNDLCSEIVYEFPELQGIMAGKY--LRNEGFSKEICMA 442 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 + EH P +++P+ K +S++DK++TLI+ + ++PSGS DPYALRR G+I Sbjct: 443 VAEHYLPGFYKDDLPSTKYGAIISISDKIETLISIFISGKRPSGSSDPYALRRNLNGVIL 502 Query: 515 IILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHD 554 II + + D+ L E+ +LI F + R+ +L + I D Sbjct: 503 IIWQFEFDLDLENIFEELLEYWKISLSNLKFVKEKVLNDLIEFTNQRIVSHLDELSISKD 562 Query: 555 LIEAI----LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI 610 LI+A L E ++ I+DL +N + F K I ++ + E N + Sbjct: 563 LIKATCFIDLSAERK-IMNILDLKNRINTINNLKGTPNFSEIQKVISRVSKLAESGNLKT 621 Query: 611 SL-----EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 ++ ++P + E +++ I + I+ + + Y Q+ L + F Sbjct: 622 TIFSHKYYVNPDLFEKQCENKVFEFIKELEEIIK--LSNWDYFQLFKLFEDNSNNLNELF 679 Query: 666 DQ---VLVNVDDREVRDNRLSLLQYIKNIIL 693 D VL+ ++ E+R+NRL+LL ++N L Sbjct: 680 DNEKGVLIMTENLEIRNNRLNLLGLVRNYSL 710 >gi|160902553|ref|YP_001568134.1| glycyl-tRNA synthetase, beta subunit [Petrotoga mobilis SJ95] gi|160360197|gb|ABX31811.1| glycyl-tRNA synthetase, beta subunit [Petrotoga mobilis SJ95] Length = 689 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 192/733 (26%), Positives = 346/733 (47%), Gaps = 88/733 (12%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 + EI E++P L L L++ + + +M + +P R Y+ GL P Sbjct: 6 IFEIGVEDLPPSEFDNILTQLEEGLKKSLEKNDLNFLSMNIFISPRRFGAYIVGLPDKQP 65 Query: 65 EKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR--K 115 +K E+R GP KA++GF + G+Q + D + + + Y+ ++ + Sbjct: 66 DKKEKRKGPPKKICFDENNQPTKALEGFAKGQGVQ-VKDVKFENNDGAEYAYIEFVKAGE 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P ++I L+ I+P I + + KSMRW + ++++RP+ +L + E I Sbjct: 125 PTKII---LQNIIPELITNMNFAKSMRWGKGN-----YTFVRPVHWVLGLYNRE-----I 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ ++ N +YGHRF I + + + +L++ V+ E R I + L Sbjct: 172 LEFEMFNEKSSNKSYGHRFFGEEMI-ITNPQTFFSELKKNYVIPLYEERIEVIEREIQEL 230 Query: 236 ASA--VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + L E +DL+ EI + E+ + +GSFD+KYL LP E+I +T++ +Q+ FV Sbjct: 231 EDEYNIKISLEEHEDLIREIAKMTEFPKGVVGSFDEKYLFLPPEIIIVTVRHHQRSFVA- 289 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + N +I + + + G +RV+ ARL+DA +++ D Sbjct: 290 MKDGKVINKYIAFQD--GFGRKSNVTNGYTRVINARLDDAAFYYEDD------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVD 412 D+ K L+ D+ + + ++G E+ RI L KIA+ + ++ +V Sbjct: 335 ---LKTDIQKRLE------DLKSITYQVELGNYREKCERISTLSSKIAEKLGFENLDVVK 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +L K D+ +++V EFPELQG + + Y + EN EEH KP + + N Sbjct: 386 RAGLLCKIDIPSKVVYEFPELQGIMARIYLKHKGENEDVFLTAEEHYKPLSENDEISQNL 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 ++ VS+ADK+D LI ++ I + PSGSKDP+ALRR GI+RI++ + D+ L + I+ Sbjct: 446 VANIVSIADKIDDLIGYFGIGKIPSGSKDPFALRRKAFGILRILISMEWDLNLKELIDLS 505 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L F +RL L +I + I ++L +++ Sbjct: 506 EKVFAESGKSNISIKPVEVELKSFLSNRLGTILERENISAEAINSVL----------INV 555 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQ--ILAIEEKKN---REISLEISPQYLLLEAEKRLY 628 K L + ++ +KF+ K FQ I A + N S E + + E EK L+ Sbjct: 556 YKPLRAYLAAKSLDKFI--KKEEFQDFITAFQRVNNISKNHYSQEYHGRLFVEEEEKTLF 613 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + + + Y + L S+ E I+ +FD + V +D +R NRL L+ + Sbjct: 614 QKYLEVKSQFENCLKKLDYDGAIESLISLKENIDRYFDNIFVMSEDESIRSNRLGFLKSL 673 Query: 689 KNIILIVINVQKI 701 + + +V+K+ Sbjct: 674 SALFYEIGDVEKL 686 >gi|293603528|ref|ZP_06685949.1| glycyl-tRNA synthetase beta subunit [Achromobacter piechaudii ATCC 43553] gi|292817964|gb|EFF77024.1| glycyl-tRNA synthetase beta subunit [Achromobacter piechaudii ATCC 43553] Length = 712 Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 197/716 (27%), Positives = 332/716 (46%), Gaps = 89/716 (12%) Query: 31 GLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK-IEERLGPRV------GAGKKAID 83 GLL E + Y TP RL ++L + +P++ E+L P G A+ Sbjct: 41 GLLAEGCAVTA----YSTPRRLAVHLSAVLAQAPDQPYAEKLMPAKIGLTEDGKATPALQ 96 Query: 84 GFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMR 142 L + GL+ I + ++ K D +A + L+ + A+ +P PK MR Sbjct: 97 KKLAAKGLENIDLATLDRESDGKQDYLIARGTAAGSSLATGLQEGIDNALNGLPIPKVMR 156 Query: 143 WSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKV 202 + ++ ++RP ++ + A+ ++ + + G T GHRF P+ Sbjct: 157 YQLADG-VTTVKFVRPAHGLVALFGAD-----VVPVSALGMQAGRDTLGHRFMCEGPVSF 210 Query: 203 QSLDHYIRDL-EEAMVLLDPECRRNAI----LNDAHRLASAVGLELVEDKDLLEEIIGLV 257 D Y L E+ V+ E RR+ I L A RL++ +G + E LL+E+ LV Sbjct: 211 ADADSYAATLAEKGRVVASFEGRRDDIQRQLLEHAGRLSATLGDD-PEVAALLDEVTALV 269 Query: 258 EWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGVLANCFILVSNIQASDGGA 316 E V++G F++++L +P+E + LT++ NQK F + G L + F++VSN+ +D Sbjct: 270 EHPTVYVGQFEEQFLQVPQECLILTMRLNQKYFPLFDPATGRLTHRFLIVSNMH-TDNPV 328 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 IV+GN RVV RL DA F++ D+ PL R+ +L Sbjct: 329 NIVEGNQRVVRPRLADAQFFFETDRKT--------------------PLAARVEQLG--S 366 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 +V+H K+GTQ ERV R+R + + +A+ + DV DRA +L+KADL + +V EFPELQG Sbjct: 367 IVYHNKLGTQLERVERVRAIARGVAEQLGGDVTAADRAAMLAKADLGSNMVGEFPELQGI 426 Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS---LADKLDTLINFWAIN 493 +G YA E S +A+ + R + P + ++T + +A++++TL+ WAI Sbjct: 427 MGAYYAAGDGEPASVVEALRTQYRNR---YDAPVTEDTLTAATLFIAERVETLVGIWAIG 483 Query: 494 EKPSGSKDPYALRRATLGIIRII--------LENKIDIPLS----------QFIEDQ--- 532 P+G +DP+ LRRA LG+I L+ D PLS F + Sbjct: 484 LAPTGERDPFGLRRAALGLISAFEQLAAGGWLKVSQDGPLSLDGLLTLAAGTFPAGKIPA 543 Query: 533 ----NLILFFHDRLKLYLHDRDIRHDLIEAI--LRPENDNLLTIVDLIKHLNEFFSSAKG 586 + F ++R + L + D + +EA+ L P + V + +A Sbjct: 544 DTLAEVRTFIYERYRNQLIN-DFDRNAVEAVIALTPPLHQVAERVRAAAAFAQLPEAA-- 600 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KRI +L +K EI ++ L+ AE+ L A ++ + + Sbjct: 601 -SLAAANKRIGNLL---KKTEGEIG-AVNDAALVEPAERALAATVAALRPQAEAQLAAGD 655 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L EP++ FF V+V +D VR NRL+LL + ++ V ++ ++ Sbjct: 656 FAGSLSTLAQAREPVDAFFVDVMVMAEDPAVRANRLALLSQLHGLMNQVADISRLA 711 >gi|255541030|ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] gi|223548759|gb|EEF50248.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] Length = 1069 Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 183/713 (25%), Positives = 348/713 (48%), Gaps = 67/713 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F+LEI +EE+P + A++ L +++ LL+++ + + ++ + TP RL + ++ LS Sbjct: 387 SFVLEIGTEEMPPQDVVHASQQLKDLVVQLLEKQRLRHGEVQAFGTPRRLVVCVESLSAK 446 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 PE E GP V G KA +GF R + D +K K + A + + Sbjct: 447 QPEIEVEVRGPPVSKAFDEQGNPTKAAEGFCRRYNIPL--DSLFRKADGKTEYIYARVTE 504 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 RL ++L +PVAI ++ +PK+MRW+ S + RP++ I+ + + + Sbjct: 505 AARLALEILSKDLPVAISRISFPKTMRWN------SQVMFSRPIRWIMAL-----HGDLV 553 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + GNI+YG R ++V++ + Y + A + ++ E R+ +IL ++ L Sbjct: 554 VPFIYAGVLSGNISYGLRNTPSATVEVENAESYASIMRNAGIHIEIEERKRSILEHSNAL 613 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +V ++ ++LL E++ LVE +G F + +L LP++L+ + ++ +QK F Sbjct: 614 AKSVNGHIIIQENLLNEVVNLVEAPFPVLGKFKESFLELPKDLLTMVMQKHQKYFAVTDE 673 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 674 TGKLLPYFIAVANGAINE--MVVRKGNEAVLRARYEDAKFFYEMDTRK------------ 719 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VD 412 KF+ R + ++FH K+GT ++++RI + K++ L+ L V Sbjct: 720 KFS----------EFRSQLKGILFHEKLGTMLDKMTRIENMVTKLSALLGIREDLLQTVQ 769 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T +V EF L G + + YA+ + +A+ + PR + +P Sbjct: 770 DAASLAMSDLATAVVTEFTSLSGIMARHYALRDGYSEQVAEALLDITLPRFSGDVLPKTD 829 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + I +++AD+LD+LI +A +PS + DP+ LRR + G+++I++E + ++ L+ + Sbjct: 830 VGILLAVADRLDSLIGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKERNLDLAHALRLA 889 Query: 531 --------DQNLI----LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 D +LI F RL+ YL D++I +++ ++L E L + + Sbjct: 890 ADVQPIKVDAHLIDDAYQFVTRRLEQYLVDKEISPEIVRSVL-AERATLPCLAARTAYKM 948 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 E S +G F + + I K+ +E+ E+ L+++ + I Sbjct: 949 ETLS--RGNLFPEVIEAYSRPTRIVRGKDVVSDIEVDEAAFETAEERALWSIFLSTKSKI 1006 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + ++ + +P+E FF+ V V V+D +R NRL+LL+ I ++ Sbjct: 1007 FPDIEVDEFVEVSS---ELLQPLEDFFNNVFVMVEDERIRKNRLALLKKIADL 1056 >gi|162456312|ref|YP_001618679.1| glycyl-tRNA synthetase beta chain [Sorangium cellulosum 'So ce 56'] gi|161166894|emb|CAN98199.1| glycyl-tRNA synthetase beta chain [Sorangium cellulosum 'So ce 56'] Length = 699 Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 199/722 (27%), Positives = 321/722 (44%), Gaps = 82/722 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+P+ A L + L E + + +R TP RL L + G++ Sbjct: 7 DLLLEIGVEELPSSFVEAALRALPDLATKRLAELRLRHGAVRALGTPRRLALLVSGVAAR 66 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ EE GP V GA KA + F + G T++D + + PK G+ R+ Sbjct: 67 QPDLEEEVTGPPVKAAFKDGAPTKAAEAFAQKLGC-TVADLRRVEGPK-GEYLAGTRREA 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++ + +P+ KSMRW F++ RP++ ++ + E +I Sbjct: 125 GRPAAELLPEVLASLVAAIPFRKSMRWGQGD-----FAFGRPIQWLVALSGGE-----VI 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +++ I G + GHRF AP I + + Y+ + A VL+DPE R + A Sbjct: 175 PVEIAGIRSGRTSRGHRFLAPGEIAIGAAKDYVEAMRAAHVLVDPEARAQLMRERLLAAA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TR 295 G L+ED L+ E + LVE V +GSF++++L LPE +I + +Q+ F R R Sbjct: 235 RDAGGALIEDDFLIGENLSLVEEPHVIVGSFEERFLELPERVILEVARGHQRYFGVRDAR 294 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L ++ V N ++ I +GN + +RL DA F++ D Sbjct: 295 TGALLPRYLAVVNT--AEAPEKIKRGNDNTMRSRLSDAQFFYRED--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALVD 412 + PL R +L +VF ++G+ + R+ L +++ L+ + + Sbjct: 338 -----VKIPLANRREKLG--GIVFQKRLGSVLAKAERVERLARELGLLLMLPEQTLVAAA 390 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE-NVPTN 471 L+K DL +V EFPELQG++G+ YA+ Q + D + +H P+G + PTN Sbjct: 391 SGAHLAKCDLVALMVGEFPELQGEMGRAYALAQGVSPEVADVVRDHYLPKGAADATAPTN 450 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI----------------IRI 515 ++ V++AD+LDTL+ +AI P+ + DPY LRRA LG+ Sbjct: 451 AGAL-VAMADRLDTLVGCFAIGLVPTSTADPYGLRRACLGVLRTLLDRDLDLRLGAAFGA 509 Query: 516 ILENKIDIPLSQFIED--QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI--- 570 + + L+ E+ L FF +RL+ L DR + D + A LR D L + Sbjct: 510 AYDGYAGVELNVAREELATRLGEFFSERLRGLLSDR-LPQDAVLACLRVAADRPLDLRAR 568 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQIL--AIEEKKNREISLEISPQYLLLEAEKRLY 628 V I L+ + GE F KR I A + ++ P +E L+ Sbjct: 569 VRAIDALSPEVRARVGEVF----KRATNIADKAPAGEPVAPFGQDVHP------SETALF 618 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A I + Y + + +F V V DD VRDNRL L++ + Sbjct: 619 AGYLTLREQIASDVRSGSYDTAFRAVADFAPLLHQYFIDVFVMTDDAAVRDNRLRLMRAL 678 Query: 689 KN 690 Sbjct: 679 SE 680 >gi|297734621|emb|CBI16672.3| unnamed protein product [Vitis vinifera] Length = 1071 Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 185/712 (25%), Positives = 343/712 (48%), Gaps = 67/712 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+P + A++ L +++ LL ++ + + ++ + TP RL + +K LS Sbjct: 390 FLLEIGTEELPPQDVASASQQLKDLIMQLLDKQRLGHSEVQAFGTPRRLVVCVKNLSTKQ 449 Query: 64 PEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E E GP V KA +GF R + ++ K D K VY+ V+ + Sbjct: 450 AENEVEVRGPPVSKAFDGQRNPTKAAEGFCRRYCV-SLDSLYKKVDGKTEYVYVRVM-ES 507 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL +VL +P I K+ +PKSMRW+ S + RP++ IL + + ++ Sbjct: 508 ARLALEVLSEDLPRIIAKISFPKSMRWN------SQVMFSRPIRWILAL-----HGDVVV 556 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + GN++YG R + IKV+S + Y + A + LD E R+ IL + LA Sbjct: 557 PFMFAGVLSGNLSYGLRNTSSATIKVESAESYATVIRNAGISLDIEERKQTILEQCNALA 616 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 V ++ LL+E++ LVE +G F + +L LP++L+ + ++ +QK F Sbjct: 617 KGVNGHILLQGSLLDEVVNLVEAPVPVIGKFKESFLELPKDLLTMVMQKHQKYFAITDDS 676 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ Sbjct: 677 GRLLPYFITVANGAINE--MVVRKGNEAVLRARYEDAKFFYE------------------ 716 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDR 413 +D K + ++L+ ++FH K+GT +++ R++ + +++ Q+ + + ++ Sbjct: 717 --MDTRKKFSEFRSQLE--GILFHEKLGTMLDKMIRVQNMVAELSLALQVNEDKLQIIQD 772 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + VP + Sbjct: 773 AASLAMSDLATAVVTEFTSLSGIMARHYALRDGYSEQIAEALFEITLPRNSGDIVPKTDV 832 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 I +++AD+LD+L+ + +PS + DP+ LRR + G++++++E ++ L ++ Sbjct: 833 GIVLAVADRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQVLVEKDKNLDLRHALQLAA 892 Query: 531 -------DQNLI----LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + N+I F RL+ +L DR+I +++ +IL E N + K + Sbjct: 893 AVQPITIEANIIDDVHQFVTRRLEQFLVDREISPEVVRSILT-ERANWPCLA--TKSAYK 949 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + ++GE + + I K+ E +E+ E+ L+ I Sbjct: 950 MDAMSRGELLPKVVEAYSRPTRIVRGKDVEADMEVDEASFETNEERALWRAFLSVRNKIY 1009 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + + L +P+E FF+ V V V++ +R NRL+LL+ I ++ Sbjct: 1010 PGIEVDDFFEASSQL---LQPLEDFFNNVFVMVEEERIRKNRLALLKKIADL 1058 >gi|283954794|ref|ZP_06372310.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 414] gi|283793634|gb|EFC32387.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 414] Length = 664 Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 192/705 (27%), Positives = 348/705 (49%), Gaps = 79/705 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L EE + + Y+TP RL + K + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNVL-EEYRLLSDFNFYYTPRRLVFFHKNFA 59 Query: 61 PHSPEKIEERLG-PRVGAGKK-----AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G P+ A K A FL+ G IS+ ++ KG L + Sbjct: 60 NKQEDSFAEFIGAPKNVAYKNGNLTPAGQSFLQKAG---ISENELTFKEIKGKEVLYHQK 116 Query: 115 KPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L +++L ++ ++ + + KSMRW ++F +IR ++SI+CIL + Sbjct: 117 AIKGLQSQEILGEMIDKFLKSLNFGKSMRWGA-----NSFEFIRAIRSIVCIL-----ND 166 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + T+ HR + + Y + LE+ ++LDP R+ IL Sbjct: 167 ELVNFQSYGVKSAKKTFIHRNISYDLQDFNNAKEYFQLLEKNYIILDPLQRKERILEQFK 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + + + ED++LL E++ + E+ +GSF++K+L +P E+I +++ NQ+ F Sbjct: 227 LIENQENIRIGEDEELLAEVVAITEYPNALLGSFEEKFLEIPSEVIITSMRENQRYFAVF 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + L+N FI+VSN D + I+ GN RV+ ARL DA+ F+ QN+L +S Sbjct: 287 NDKS-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFY---QNDL-------QS 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVD 412 LK +++A++ ++ +GT ++ R + + + Q+ D + + Sbjct: 335 GLK---------PEKLAKM-----IYLEGLGTMQDKSLREIKIAEILCQIFHNDKIENIS 380 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 381 TALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTE 440 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--LENKIDI-----PL 525 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L + DI L Sbjct: 441 FSSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKL 500 Query: 526 SQFIEDQNLIL---FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 S + + ++ + F +RL + + ++++L +N +L+ I + L + Sbjct: 501 SSYYKSFDMQILKDFIFERLYTFY---TVNASFVKSVLSSKNTDLIHINQSVHALIKLSK 557 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD--FGTHIQE 640 + + KR+ I N+ + ++ P E E +LY + +QE Sbjct: 558 KDNFHENFTTFKRLANI------ANKTLH-KVDPTLFAQEIENKLYKAFQEKTKADSLQE 610 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +++ L ++ I+ FFDQV++N +D ++++NR +L+ Sbjct: 611 KLEN---------LFALKPFIDEFFDQVMINAEDEKLKNNRQALV 646 >gi|298491727|ref|YP_003721904.1| glycyl-tRNA synthetase subunit beta ['Nostoc azollae' 0708] gi|298233645|gb|ADI64781.1| glycyl-tRNA synthetase, beta subunit ['Nostoc azollae' 0708] Length = 733 Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 194/728 (26%), Positives = 321/728 (44%), Gaps = 99/728 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L+ + + + Y TP RL + + GL Sbjct: 1 MPAFLLEVGTEELPASFLSSAIVQWRSRIPQTLEANNLKTETVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+K EE GP A K GF + G++ D + +KGD + Sbjct: 61 SQQPDKEEEIKGPSAQAAFKDGKPTPGAVGFAKKQGVEL--DAFEIRPTEKGDFVFIQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L + P + + + MRW + S RP++ ++ +L + Sbjct: 119 TPGRPVAEILTELFPQWVWSLEGKRLMRWGSGDGRFS-----RPIRWLVALLDGD----- 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+LK + I+ HR P P+ + Y+ L V++ PE R N I Sbjct: 169 VLPLELKNGDKTVKSDRISQAHRVLHPEPVSISHATEYVNTLRSGYVIVSPEERENIITE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +G DLLEE LVE+ +G F+ ++L LP E+ + +Q+ F Sbjct: 229 QVKTAVQKLGGFTPIYPDLLEETTNLVEYPTAVVGKFEDEFLLLPTEVSTTVMVNHQRYF 288 Query: 291 -VTRTREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 V +T E +L N FI VSN + I GN +V+ ARL D F+K Sbjct: 289 PVFKTSENHELLPN-FITVSNGDPTKSD-IIAVGNEKVIRARLADGRFFYK--------- 337 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLI 404 DL+KPL+ + +L+ V F +G+ +V R+ + +I+ QL Sbjct: 338 -----------ADLAKPLESFLPQLET--VTFQEDLGSVRAKVERVVNIAARISQQLQLG 384 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + + + RA +L KADL T++V EFPELQG +G++YA+ E+ AI EH PR Sbjct: 385 NNERQKIQRAALLCKADLVTQMVSEFPELQGTMGEKYALASAEDSEVALAIYEHYLPRYA 444 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------- 516 +N P V+LAD+LDTL++ + + KPSGS DP+ALRRA II+II Sbjct: 445 SDNFPRTITGKVVALADRLDTLVSIFGLGLKPSGSSDPFALRRAANAIIKIICSQSSDST 504 Query: 517 ---------------LENKIDIPLSQFIEDQNLIL-----FFHDRLKLYLHDRDIR---- 552 LE + F +D++ ++ FF R++ + +++ Sbjct: 505 HQDYKDGLTLDLAGLLEQTATEFAAAFNKDRDSLIKVLQDFFIQRIRTLFQEAEVQIFID 564 Query: 553 ---HDLIEAILRPEND---------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 +DL+ A+L END +LL + D +L + ++ +K + R ++ Sbjct: 565 EIDYDLVNAVLG-ENDPEYTERALQDLLDVRDRALYLQQIRNNGTLDKIYETVNRSTRLA 623 Query: 601 AIEEKKNREI--SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 A +++ + + P+ +E Y + + Q + + Y + L I Sbjct: 624 AQGNLNFQQLEPTAVVKPELFQKSSESAFYNALLELVPQTQAAQRTRNYQILIAALEKIA 683 Query: 659 EPIEIFFD 666 + FD Sbjct: 684 PTVSKLFD 691 >gi|224372774|ref|YP_002607146.1| glycyl-tRNA synthetase subunit beta [Nautilia profundicola AmH] gi|223588758|gb|ACM92494.1| glycyl-tRNA synthetase, beta subunit [Nautilia profundicola AmH] Length = 657 Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 203/713 (28%), Positives = 346/713 (48%), Gaps = 77/713 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA K ++ + +L E+ + Y+TP RL L+ + Sbjct: 6 LIEIGVEELPAIPLLKELPNIEKKWLDVL-EKYDLKATFSFYYTPRRLTLWHREFPVKQE 64 Query: 65 EKIEERLG-PR--VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 +K EE G P+ + KA++GF + G+ ++ + K K Y K K E Sbjct: 65 DKTEEIWGAPKEIIEKNPKALEGFAKKCGI-SVDEVTFKAKGNKEFAYFQKEVKGKEAKE 123 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 +L ++ + + + K+M+W + +IRP++ ILC+L ++++I+ D Sbjct: 124 -LLPQMINEWLNSLSFGKTMKWGECEA-----EFIRPVRWILCML-----EDEVIEFDAY 172 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 + NIT HR I++ + Y L++ V+L + R+ IL + +L G+ Sbjct: 173 CVKSSNITKPHRIFKDD-IEIGYVGDYFCRLDKHGVILYQDERKAKILREIEKLEKENGI 231 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++ D+DLL EI+ + E+ +G FD+++L LP E+I ++K +Q+ F ++G L N Sbjct: 232 KVEIDEDLLAEIVAITEYPTPLLGKFDEEFLVLPPEVIITSMKEHQRYFPV-YKDGKLTN 290 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSN +D I+ GN +V+ ARL DAL FW+ D N ++ LK Sbjct: 291 AFVVVSN-AYTDNFDKIIAGNEKVLRARLSDALFFWENDLKNGLSIEGLK---------- 339 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 D+V+ +G+ ++V R + + +A AD + +A+ L+KAD Sbjct: 340 --------------DIVYMDGLGSVYDKVKREEKIAEILADKFSADKDKLLKAVNLAKAD 385 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L TE+V EF ELQG +G YA AI+E +NK S +++A Sbjct: 386 LLTEMVYEFTELQGVMGYYYAKAAGIEDEIAVAIKEQYTDEA------SNKTSALLNIAR 439 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----------IED 531 LDTL+ ++I + P G+KDP+ LRRA II+I EN ID+ + + Sbjct: 440 NLDTLMALFSIGKIPKGNKDPFGLRRAANYIIKIANENDIDLDIKDIINELKDNYKDFDT 499 Query: 532 QNLILFFHDRL-KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +L+ F +RL K Y ++ +I ++L NL I +K +NE +S ++ Sbjct: 500 NSLVDFIFERLYKFY----NVNPSVIRSVLATGESNLREIDKKVKLINEMVNSEGFKELS 555 Query: 591 LSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + KR+ I+ K+ ++ S+ + E EK L+ ++ + K + Sbjct: 556 STFKRVANIV-----KDFDLNSINVDESLFEKEEEKALW-------DEFKKVKEIKNLEE 603 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D L S+ I+ FFD V+VNVDD +VR NR SL+ I L + ++++I Sbjct: 604 KLDFLVSLKPLIDKFFDNVMVNVDDEKVRHNRKSLIASIYKEFLDIADIKEIT 656 >gi|330818265|ref|YP_004361970.1| Glycyl-tRNA synthetase beta subunit [Burkholderia gladioli BSR3] gi|327370658|gb|AEA62014.1| Glycyl-tRNA synthetase beta subunit [Burkholderia gladioli BSR3] Length = 699 Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 193/625 (30%), Positives = 303/625 (48%), Gaps = 52/625 (8%) Query: 94 ISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAF 153 I+D + +D K + + P + D L+ + + K+P PK M + S Sbjct: 110 IADLERAQD-GKAEAFFLNYSAPGVTLADGLQAALKETLDKLPIPKVMTYQRPDG--SDV 166 Query: 154 SWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE 213 ++RP+ L +L D ++ + I G+ T GHRF + + + S Y L Sbjct: 167 QFVRPVHR-LTVLHDTD----VVPVSAFGIDAGDTTLGHRFLSSGAVAIGSAAGYAETLR 221 Query: 214 EAMVLLDPECRRNAILNDAHRLA-SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYL 272 E ++ R + A LA A G +V + LL+E+ LVEW V+ F+ ++L Sbjct: 222 ERGRVIAHFVDRKEQIRTA--LAEQAGGDTVVMPEALLDEVASLVEWPVVYACRFEDEFL 279 Query: 273 CLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLED 332 +P+E + LT++TNQK F G L + F++VSNI+ + IV+GN RVV RL D Sbjct: 280 QVPQECLILTMQTNQKYFALTDAAGKLRSRFLIVSNIETATP-VEIVEGNERVVRPRLAD 338 Query: 333 ALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSR 392 A F++ D+ L R+ RL +VV+H K+G+Q RV R Sbjct: 339 AKFFFETDKKTR--------------------LADRVPRL--ANVVYHNKLGSQLARVER 376 Query: 393 IRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCC 452 I + IA I AD AL RA L+KADL T++V EFPELQG +G YA E Sbjct: 377 IEAIAAGIAPAIGADPALAQRAARLAKADLLTDMVGEFPELQGTMGTYYARHDGEPEEVA 436 Query: 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 A EH +PR + +P +S V+LADKL+TL+ W I P+G KDP+ALRR LG+ Sbjct: 437 VACTEHYQPRFSGDTLPEAAVSTAVALADKLETLVGIWGIGLAPTGEKDPFALRRHALGV 496 Query: 513 IRIILENKIDIPLSQFIEDQN---------------LILFFHDRLKLYLHDRDIRHDLIE 557 +R++LE ++ + + + + + FF DRL+ L +R I+ Sbjct: 497 LRLLLEKQLPLDIVELLRAAQASFAGIAGVADSTDAIFAFFLDRLRGLLRERGYSAGEID 556 Query: 558 AILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ 617 A+L E + ++ + + EF A+ E + KRI IL +K I P Sbjct: 557 AVLGLEPTRIDELIARLDAVREFTRLAEAETLAAANKRISNIL---KKSEGAAPGAIQPA 613 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 L AE+ L A +++ +Q + + Y L ++ P++ FF+ V+VN +D + Sbjct: 614 LLAEPAEQALAAQLAEVAPRVQSQLAARDYTGALSALAALRAPVDTFFNDVMVNAEDPAL 673 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R NRL+LL + + V ++ K+ Sbjct: 674 RANRLALLSALHQQMNCVADISKLA 698 >gi|282897614|ref|ZP_06305614.1| Glycyl and Arginyl tRNA synthetase [Raphidiopsis brookii D9] gi|281197537|gb|EFA72433.1| Glycyl and Arginyl tRNA synthetase [Raphidiopsis brookii D9] Length = 716 Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 198/712 (27%), Positives = 326/712 (45%), Gaps = 84/712 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + +L+ G+ + + + TP RL + + GL Sbjct: 1 MTAFLLEVGTEELPASFLSSAITQWRSRIPQMLEAHGLPIEKVAVFGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP + G KA +GF + G++ +S +++ KGD R Sbjct: 61 SQQPDQDEEIKGPPAQAAFKDGKPTKAAEGFAKKQGVE-LSALEVRST-DKGDFIFVNKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R I ++L +VP + + + MRW + S RP++ ++ +L + Sbjct: 119 TLGRPITEILTELVPQWVWSLEGKRLMRWGSGDGRFS-----RPIRWLVALLDGD----- 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L+ + I++ HR + + Y+ L V++ PE R I++ Sbjct: 169 VLPLELRNGEKIVKSDRISWVHRVLHREAVSISHATEYVETLANGYVIVSPEEREKIIVD 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK-- 288 +R +G DLL E LVE+ +G F+ ++L LP E+ + T+Q+ Sbjct: 229 QVNRAVEELGGCTEIYPDLLAETTNLVEYPTAVVGKFEDEFLQLPTEVSTTVMVTHQRYF 288 Query: 289 -CFVTRTREGVLANCFILVSN--IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 F R R +L N F+ +SN + SD I GN RV+ ARL D F++ Sbjct: 289 PVFKNRDRRELLPN-FVTISNGDPEKSD---IIALGNERVIRARLADGRFFYE------- 337 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--- 402 DL+KPL + +L+ V F +G+ +V+RI + + I Q Sbjct: 338 -------------ADLAKPLADFLPQLET--VTFQEDLGSVRAKVTRIGNIAQVICQQLG 382 Query: 403 LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 L + + V+RA +L KADL T++V EFPELQG +G++YA+ E+ AI EH PR Sbjct: 383 LGETETKRVERAALLCKADLVTQMVYEFPELQGIMGEKYALASGEDEEVAKAIFEHYLPR 442 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +PT I V LAD+LDTLI+ + + PSGS DP+ALRRA GI+ I + Sbjct: 443 NADDILPTTLIGKIVGLADRLDTLISIFGLGLIPSGSSDPFALRRAANGIVNITWVANLP 502 Query: 523 IPLSQFIE-------------DQNLIL----FFHDRLKLYLH-DRDIRHDLIEAILRPEN 564 I L +E Q+LI FF R++ L ++ I +DL+ A+L ++ Sbjct: 503 INLEYLLEYTATSFAHTFHKDGQSLISILREFFIQRIRTLLQEEKHIDYDLVNAVLGEQD 562 Query: 565 --------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--I 614 +LL I D +L + + EK + R ++ A + +++ + I Sbjct: 563 PEYIERALQDLLDIRDRAAYLQQIRHNGTLEKIYETINRSTRLAAQGDLDLQQLIPDKLI 622 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + +E LY + Q + + Y + L I + FFD Sbjct: 623 NSTLFQKSSETALYQALVALVPQTQLAQQTRNYQLLIAALEKIAPTVSQFFD 674 >gi|94676541|ref|YP_588622.1| glycyl-tRNA synthetase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123384150|sp|Q1LTU2|SYGB_BAUCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94219691|gb|ABF13850.1| glycyl-tRNA synthetase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 699 Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 198/726 (27%), Positives = 338/726 (46%), Gaps = 82/726 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+PA+ + A+ + I L G+ Y ++ + P RL + + ++ Sbjct: 6 FLVEIGTEELPAKELRRLAQYFTANFINELNANGINYNDINWFAAPRRLAIKVNSINSIP 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-LAVLRK 115 + E+ GP + G A G+ R+ G+ + D + +Y + V K Sbjct: 66 TKSYMEKRGPAINKAFDAEGKPTPAAIGWARNCGITVNQAERFTTDKGEWLIYRMLVETK 125 Query: 116 PKRLIEDVLKTIVPVAIQKVP-WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P ++ +L ++V A+ K K MRW + + +IRP+++I +L + Sbjct: 126 P---VQKLLCSMVYNALTKFSSLTKIMRWGEKN-----YKFIRPVRTITLLL-----DDL 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I ++ I I GHRF I + D+Y L E V+ D E R++ I + Sbjct: 173 VIPGNIFGIDSNRIILGHRFMGESVISLLHADYYPNVLLERGRVIADYELRKDTIRRNIE 232 Query: 234 RLASAVG-LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + +G + DK LLEE+ LV+W V SF+ +L +P E + T++ NQK F Sbjct: 233 IMVKKIGGFTKINDK-LLEEVTSLVDWPIVLTASFNANFLRIPAEALIYTMENNQKYFPV 291 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI V+NI++++ IV GN +V+ +RL D F Sbjct: 292 YDAKGKLLPYFIFVTNIESTNTNQ-IVVGNEKVMRSRLADVEFF---------------- 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 FN+D + L+ + L V F ++GT ++ R+ +L IA++I D+ Sbjct: 335 ----FNIDRKQKLEDYLLLLG--QVKFQMELGTLLDKSYRLEILASWIAEIISTDIKQAA 388 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA ++SK DL T++V E+PE+QG IG YA L E A +E P +N+PT Sbjct: 389 RAALISKCDLMTQMVFEYPEIQGIIGMHYATLDGETELVALAQKEQYLPLFSGDNLPTTL 448 Query: 473 ISITVSLADKLDTLINFWAINEKPSG-SKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S VS+ADK+D L + IN++ + + DP ALRRA LGI+RII+E ++ I L I+ Sbjct: 449 VSCAVSIADKMDNLAGIFGINQQYTKQANDPLALRRAALGILRIIIEKQLPIDLLSLIDK 508 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + +I F +RL + + D I A+ + + Sbjct: 509 AVFLYNKKLTNTIVVEQIIHFMLNRLLSWYKKQGYSIDTINAV--------MAVYKPTGK 560 Query: 577 LNEFFSSAKGEKFLLS-------AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 L F + + +L KRIF I+A K I+ E++ L E L Sbjct: 561 LIHFDARLRAVHYLRQIPHAENLTKRIFNIIA---KHKDLINGEVNFTLLKQPEEVILIN 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I+ + + +Y + L ++ E I FF ++++ +++E+ NRL+++ ++ Sbjct: 618 SITQLHKKLILFFEKGKYQEALWELINLREIINTFFSKIIIMTENKELCINRLNIINKVR 677 Query: 690 NIILIV 695 + LI+ Sbjct: 678 QLFLII 683 >gi|159026323|emb|CAO88900.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 710 Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 187/636 (29%), Positives = 291/636 (45%), Gaps = 63/636 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+PA A L + L+ E + ++ Y TP RL + + GL Sbjct: 2 DFLLEVGTEELPADFVDSAIAQLQERVSKSLETESLDATAIQVYATPRRLAVLITGLPRE 61 Query: 63 SPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP V A K A +GF R G+ T D + KG+ P Sbjct: 62 QEARSEEIKGPPVSAAYKNGQITAAGEGFARKQGVST--DAFSIRATDKGEFVYIEKTIP 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++P I ++ + MRW + RP++ +L ++ E ++I Sbjct: 120 GRQTAEILTELIPQWITRLEGRRFMRWGDGD-----LRFPRPIRWLLTLVDGEVLPLELI 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + +T+GHR P + + Y+ L V DP+ R+ I + LA Sbjct: 175 N-GSTTLTSDRLTFGHRILHPQSLAISHPQAYLTSLRSIFVEADPQVRQQIITDQITTLA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DLL E+ LVE+ +G FD ++L LP E+I + T+Q+ F +T++ Sbjct: 234 KKLQGVAEIPADLLAEVTNLVEYPTAIVGKFDDEFLELPPEVIITVMVTHQRYFPVKTKQ 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+ FI +SN I GN RV+ ARL DA F+ Sbjct: 294 G-LSPYFITISNGDPQKS-EIISAGNERVIRARLADARFFY------------------- 332 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDR 413 D +PLD + +L+ V F ++GT ++V RI + + I + ++ D + ++ Sbjct: 333 -TADCDEPLDSFLPQLET--VTFQEELGTMRDKVDRIMEIAQMIVEQLNLDEQSRSDIES 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L KADL T++V EFPELQG + ++YA++ E+ I EH PR + +P Sbjct: 390 TAMLCKADLVTQMVYEFPELQGVMAEKYALISGESAVVARGIFEHYLPRNAGDLLPETIT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 V +AD+LDTL+ + + P+GS DP+ALRRA II II +I L IE Sbjct: 450 GQVVGIADRLDTLVGIFGLGILPTGSSDPFALRRAANAIISIIWSADFNINLLALIEQIA 509 Query: 532 -------------QNLIL-FFHDRLK-LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 NLI FF RL+ L + D I +DL+ A+L END + Sbjct: 510 QDFVTSHPDKPNPANLIKDFFLQRLQTLLIDDLRIDYDLVNAVLG-ENDPEYK----SRA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 L + + +FL ++ Q+ I E NR L Sbjct: 565 LENLLDTRERARFLCQIRQDGQLANIYETVNRSTRL 600 >gi|309803277|ref|ZP_07697374.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 11V1-d] gi|308164785|gb|EFO67035.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 11V1-d] Length = 473 Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 154/492 (31%), Positives = 243/492 (49%), Gaps = 57/492 (11%) Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 ++++ +P MRW ++RP+ I+ + +E KI+D I G TYG Sbjct: 5 VKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSEIIPVKILD-----IVAGRKTYG 54 Query: 192 HRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 HRF + S D Y L+ V+ D R+N IL+ + L ++ D LLE Sbjct: 55 HRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSLCEKNNWQVKIDSGLLE 113 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 E+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F EG L N FI + N Sbjct: 114 EVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDHEGTLINHFIAIRN-GN 172 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 SD ++ GN +V+ ARL+DA F+ D+ PL + + Sbjct: 173 SDYLDNVIAGNEKVLVARLDDAQFFYDEDK--------------------KYPLSHFVEK 212 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLCTEIVR 428 L V FH KIG+ E++ R++++G+ I + I+ +++A DRA + K DL T +V Sbjct: 213 LS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADFDRAADIYKFDLVTNMVG 270 Query: 429 EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLIN 488 EF ELQG +G YA L E + AI+E P ++P KI +S+ADKLDT+I Sbjct: 271 EFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPITKIGSLLSIADKLDTIIA 330 Query: 489 FWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL------------ 536 F+ P+ S DPYALRR+ GI+RI++ +I + ++D +L Sbjct: 331 FFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDIIALLKGKTVAKLPNDE 390 Query: 537 --------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 F +R+K L + +D+I+ +L N+ I+ + L E +K +K Sbjct: 391 ATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILSIADILQENHDDSKFKK 450 Query: 589 FLLSAKRIFQIL 600 + S RI IL Sbjct: 451 VVESLTRIANIL 462 >gi|254525694|ref|ZP_05137746.1| glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9202] gi|221537118|gb|EEE39571.1| glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9202] Length = 718 Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 205/751 (27%), Positives = 360/751 (47%), Gaps = 91/751 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA H + ++ + + + TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPANFSHYVLNQFKSQIEFEFDKKLIKFNKISCTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++I R GP+ G KA GF S G+ + D +I+ K G V+ +R Sbjct: 61 DRGDDEIIIRKGPKASSAYINGTPTKAAVGFANSLGID-VDDLEIENTEKGGFVFGKKVR 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + L I+P I+ + P+ M+W + F + RP++ ++ I ++ Sbjct: 120 KGES-TRISLSLIIPKVIKSLQGPRFMKWGNGN-----FKFSRPIRWLVSIY-----NDE 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+D +L E I GN++ HR I++ S ++Y L E VL+ E R+ I+N Sbjct: 169 ILDFNLDECDPKIVVGNLSKSHRL-IDKVIEINSPENYFEILAENGVLVKREERKEKIIN 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 ++ + ++ L+ +LL E+ LVE+ V G F++++L LP E++ + +K++Q+ Sbjct: 228 FINQSSESLNLKPDLSDELLNELTDLVEFPNVITGKFEEEFLDLPVEVLSMVMKSHQRYI 287 Query: 291 -----------VTRTREGVLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + + E +++ F+L+SN +Q S+ IV+GN +V+ AR DA F + Sbjct: 288 PLLKKSDSFSKLDLSSEQIISTNFLLISNGLQESNN--IIVKGNEKVLKARFSDAKFFVE 345 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 D+ +SS +R +L V + G +RV RI+ + Sbjct: 346 SDKT----VSS----------------SERNEKLK--SVSYLKGFGNVFQRVERIKFIAL 383 Query: 399 KIAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 K+ + ++ D + A SK DLC+EIV EFPELQG +G +Y + + C A+ Sbjct: 384 KVLKNLNDKFLDKEKIIEAANFSKNDLCSEIVYEFPELQGIMGGKYLKYEGYSEEVCLAV 443 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 EH P + +P+ K +S+ADKL+TLI+ + ++PSGS DPYALRR G+++I Sbjct: 444 AEHYLPSSSKDELPSTKYGAIISVADKLETLISIFVSGKRPSGSSDPYALRRNLNGVVKI 503 Query: 516 --------ILEN---------KIDIPLSQFIEDQ---NLILFFHDRLKLYLHDRDIRHDL 555 ++EN K +P FI+ + +LI F R++ +L + I +L Sbjct: 504 MWNFELDFLIENLFEELLEYWKTSLPNLNFIQKKVFDDLIEFLLQRIESHLEEISIDKEL 563 Query: 556 IEAILRPE---NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 + AI + +L I DL + + F K I ++ + + N + + Sbjct: 564 VRAICSSDEFFKKRILNITDLKNRIEAISIYKERGSFDEIQKIITRVSKLADSGNLKKDV 623 Query: 613 EISPQYLLLEA-EKRLYAVISDFGTHIQE--SMDHKRYHQIGDLLHSICEPIEIFFDQ-- 667 + Y+ E EK+ + +F ++ + + Y ++ +L + +E FD Sbjct: 624 LSNEGYINKEIFEKQCELKVFEFIEELEGLFTKNDWNYLKLLNLFEINSKNLEELFDNEK 683 Query: 668 -VLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 VLV +D ++R+NRL+LL +I+N L +I+ Sbjct: 684 GVLVMSEDNQIRENRLNLLGFIRNYSLKIID 714 >gi|325919827|ref|ZP_08181819.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] gi|325549693|gb|EGD20555.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] Length = 745 Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 159/541 (29%), Positives = 262/541 (48%), Gaps = 54/541 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV + + TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVLHGLEKRGVAVTRGDAKPLSTPRRLAVLLPGVAT 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTG-----LQTISDCQIKKDPKKGDVY 109 PE+ E LGP + G KA+ GF G L+ SD KG+ + Sbjct: 67 EQPEQRSEVLGPYLNIALDAEGKPTKALAGFAAKAGIDWTALERTSDA-------KGERF 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + P D+L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 120 VHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF--- 171 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + +I +L + +T GHRF + + + Y+ L A VL+D + RR I+ Sbjct: 172 --GDAVIPAELLGVRGDRLTRGHRFMHQGEVSLAAPGDYVEALRAAHVLVDADARRARIV 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G +D L++++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 230 EEVEAAAKQAGGSARISEDNLQQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKF 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L FI ++NI + D A + +G RV+ R DA F Sbjct: 290 FPVLDAGGKLTEQFIGIANIVSKDV-AEVAKGYERVIRPRFADAKFF------------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 F+ DL + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 336 -------FDEDLKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEVIAPQVGADPV 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 387 QARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDIA 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L I Sbjct: 447 LSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLLDLI 506 Query: 530 E 530 + Sbjct: 507 K 507 >gi|78779151|ref|YP_397263.1| glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9312] gi|78712650|gb|ABB49827.1| glycyl-tRNA synthetase beta chain [Prochlorococcus marinus str. MIT 9312] Length = 720 Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 204/752 (27%), Positives = 356/752 (47%), Gaps = 97/752 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA+ H E ++ L ++ + + N+ TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPAKFSHSVLEQFKSLIEFELDKKLIKFNNIVVTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + +K R GP+ G+ A GF S G+ + D +IK + +KG+ Sbjct: 61 DYGEDKTIVRKGPKANSAFLNGSPTNAALGFANSLGID-VDDLEIK-NTEKGEFVFGKKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L +I+P ++ + + M+W + S RP++ I I + Sbjct: 119 EKGQSTRISLSSIIPKVVKSLQGTRFMKWGAGNIKFS-----RPIRWITSIY-----NDD 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+D E I N + HR +VQ+ D++ L++ VL+ R+ I Sbjct: 169 ILDFAFNECDPNIQISNKSKSHRL-INEVFEVQNPDNFFELLKQNRVLVKRHERQEQIET 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK-- 288 H+ + + L+ K+LL E+ LVEW + +G F +++L LP E++ +K++Q+ Sbjct: 228 LIHQASKLLNLKPDLSKELLNELTDLVEWPDLVIGKFSEEFLDLPVEVLSTVMKSHQRYV 287 Query: 289 -------CFVT---RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 F + + + N F++ + ++ S+ I +GN +V+ AR DA F + Sbjct: 288 PLLLKNNTFSKLDLSSEKNISTNFFVISNGLEESNNN--IAKGNEKVLRARFSDAKFFVE 345 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 D+ K S+++ N L V + +G +RV RI+ + K Sbjct: 346 SDK---------KVSSIERNEKLK-------------SVSYLKGLGNIFQRVERIQEVTK 383 Query: 399 KIAQLIDADVALVDRAIV----LSKADLCTEIVREFPELQGKIGKEYAVLQNENIS--CC 452 KI ++ D +L D+ I+ K DLC+EIV EFPELQG +G +Y L+NE S C Sbjct: 384 KILTFLN-DKSLEDKKIIEAARYCKNDLCSEIVFEFPELQGIMGGKY--LKNEGFSEDVC 440 Query: 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 A+ EH P + +P++K VS+ADK++TLI+ + ++PSGS DPYALRR G+ Sbjct: 441 LAVAEHYLPSFYKDALPSSKYGAIVSIADKVETLISIFISGKRPSGSSDPYALRRNLNGV 500 Query: 513 IRIILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIR 552 I+II + ++D+PL ++ +L F R+ +L + + Sbjct: 501 IKIIWDYELDLPLDNLFKELFDFWKISFPNLDFSKDKVLNDLNEFLVQRIVSHLEEISLS 560 Query: 553 HDLIEAILRPE---NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 +LI+AI + +L IVDL + + + E F+ K I ++ + N Sbjct: 561 KELIKAICSSDELYQKRILNIVDLKNRIKSIVNFKEKETFVEIQKVITRVSKLANSSNLS 620 Query: 610 ISLEISPQYLLLEA-EKRLYAVISDFGTHIQE--SMDHKRYHQIGDLLHSICEPIEIFFD 666 + ++ Y+ + EK + +F +++ S + Y ++ +L IE FD Sbjct: 621 TDVFLTGDYVNTKIFEKECELKVFEFIRELEKLFSTGYCNYLKLLNLFEINKNTIEDLFD 680 Query: 667 Q---VLVNVDDREVRDNRLSLLQYIKNIILIV 695 VLV +D ++R+NRL+LL I+N L++ Sbjct: 681 NEKGVLVMSEDIKIRNNRLNLLSLIRNYSLLI 712 >gi|237752864|ref|ZP_04583344.1| glycyl-tRNA synthetase subunit beta [Helicobacter winghamensis ATCC BAA-430] gi|229375131|gb|EEO25222.1| glycyl-tRNA synthetase subunit beta [Helicobacter winghamensis ATCC BAA-430] Length = 683 Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 196/694 (28%), Positives = 319/694 (45%), Gaps = 99/694 (14%) Query: 46 YWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQI 99 Y+TP RL + +I E GP + K A GF + G++ I Sbjct: 49 YYTPRRLVIIANDFPKIQNAEILEFFGPPLSIAYKDNTPTQAALGFFKKCGIEPKDTQTI 108 Query: 100 KKDPKKGDVYLAVLRKPKRLIED-VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRP 158 +KD G L + ++L + +L+ I+ ++ + + K+MRW + S+IRP Sbjct: 109 EKD---GKEILYCQKSAEQLPSNTLLEEIIKEFLESLNFGKTMRWGSLKE-----SFIRP 160 Query: 159 LKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVL 218 + ILC+L KII L L + TY HR + P + SL+ Y++ LE V+ Sbjct: 161 ISWILCLL-----DSKIIPLKLYGVESKAQTYVHRNVSFEPFDINSLESYLQTLENNGVI 215 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 LD R++ ILN ++ +++ D++LL E++ + E+ G F +L LP Sbjct: 216 LDQNKRKDRILNAITQIEKTQNIQVEIDEELLNEVVAITEYPTALFGEFSAHFLELPAPC 275 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 I ++K NQ+ F T ++G L + FILVSN ++ I+ GN +V+ ARLEDAL F+ Sbjct: 276 IITSMKVNQRYFATY-KDGKLHHGFILVSN-SLTENPEEIITGNVKVLRARLEDALFFYH 333 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 D NN LKE V F +G+ ++ R R++ K Sbjct: 334 NDLNNGFMPEKLKE------------------------VTFVEGLGSMWDKTERERLIVK 369 Query: 399 KIAQLIDADVA-----------LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE 447 + L + ++D+A + SKADL +E+V EF ELQG +G YA Sbjct: 370 ALGDLFKESLQKGEQNLGLAFEILDQACLFSKADLMSEMVYEFTELQGIMGYYYAKALRY 429 Query: 448 NISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRR 507 AI+E P +P+N IS ++LA KLD L+ ++I + PSGS+DP+ALRR Sbjct: 430 EERVALAIKEQYLPNSEESVLPSNLISAIIALAYKLDNLLGLFSIGKIPSGSRDPFALRR 489 Query: 508 ATLGIIRIILENKIDIPLSQFIED-------------QNLILFFHDRLKLYLHDRDIRHD 554 A G+I+IIL + L + ++ +N IL +RL L + Sbjct: 490 AANGVIKIILHFNLPFNLREVLQTLKNHYKDFDTTGLENFIL---ERLDSTL---EFNPS 543 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 L+ A+L +L I + L+ S+ K + L + ++ I ++ + + L I Sbjct: 544 LLRAVLATNERDLAQIFQKLTALD---SALKNQDKQLLTQTFKRLANITKEVDLKGELLI 600 Query: 615 SPQYLLLEAEKRLYAVI-------SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 LL E LY +D+ H++ L ++ +E FFD+ Sbjct: 601 KEDKLLASEEIELYKSFKQCEFSGNDYAKHLKS-------------LLALSPILERFFDK 647 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VLVN D + ++NR L+ I L + ++++I Sbjct: 648 VLVNAPDEDFKNNRKHLIARIYREFLNIADIKEI 681 >gi|313903269|ref|ZP_07836661.1| glycyl-tRNA synthetase, beta subunit [Thermaerobacter subterraneus DSM 13965] gi|313466357|gb|EFR61879.1| glycyl-tRNA synthetase, beta subunit [Thermaerobacter subterraneus DSM 13965] Length = 740 Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 210/757 (27%), Positives = 351/757 (46%), Gaps = 114/757 (15%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ EEIPA +A L+ L E G+ Y+ +R TP RL L ++GLSP Sbjct: 16 DLLVEVGCEEIPAGDCGEARRQLAERAGTALAEAGLTYEVVRSLGTPRRLTLVVQGLSPR 75 Query: 63 SPEKIEERLGPR----VGAGKK---AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G G + A GF RS G++ +S +++ P+ G+ A Sbjct: 76 QEAREEWVRGPSRAAAFGPGGEPAPAALGFARSQGVE-VSQLVVRQTPQ-GEYVFARKVH 133 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL ++P + + + ++MRW +IRP+ ++ +L E++ Sbjct: 134 QGRPAAEVLAELLPAVLGGLEFRRTMRWGAGEH-----RFIRPVHWLVALL-----GEEV 183 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSL--DHYIRDLEEAMVLLDPECRRNAILNDAH 233 + + + G ++YGHRF P +++ S D Y R L EA V++DPE RR I+ A Sbjct: 184 LPVSFAGVRAGRVSYGHRFLHPEAVELASAAEDEYRRRLAEAYVVVDPEERRQRIVEQAR 243 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VT 292 +A+AVG E D +LL+E++ LVE+ F GSF + L LP +++ T+K +Q+ F V Sbjct: 244 AVAAAVGGEAEIDPELLDEVVDLVEYPTAFTGSFAPEMLELPRDVLVTTMKVHQRYFPVR 303 Query: 293 RTREGVLANCFILVSN-----IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + E L FI V N +Q + QGN RV+ ARL DA F+++D+ Sbjct: 304 QPGESRLMPYFIAVRNGDERHLQ------TVRQGNERVIRARLADARFFFQQDRQ----- 352 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LI 404 + L R+A D+ V F +GT ++ R+ L +A+ L Sbjct: 353 ---------------RRLADRVA--DLERVSFLPGLGTLLDKTRRLERLVGWLAEELGLP 395 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + RA L+KADL T +V EF EL G++G+EYA+L E + A+ E PRG Sbjct: 396 AEERQQAARAARLAKADLVTALVYEFTELAGRMGREYALLDGEPPAVAQALAEQYLPRGG 455 Query: 465 LEN-VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------- 516 + +P+ + +++AD+ DTL +A +P+GS+DPY LRRA +G++R++ Sbjct: 456 DDGELPSTWPGLLLAIADRADTLAGCFAAGLEPTGSQDPYGLRRAGVGLLRLLAGPAAQG 515 Query: 517 --------------------------LENKIDIPLSQFIED----------------QNL 534 L+ +D L+ ++ L Sbjct: 516 PAGRAEGGGAPAGAGAAGSGHPALPPLDALLDQALAGYLPPVASPAVEVRFDPDEVRARL 575 Query: 535 ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 + F RL+ L + HD+I+A+L + ++ + + + E +S L + Sbjct: 576 MDFLAARLRGLLAEAGYAHDVIQAVLAVDARDVPGVWARARAVAELVASPLAADVLTVHR 635 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 R + R + + P E+ LYA + +QE++ + Y + Sbjct: 636 RAANL------AGRAEADAVDPALFREAEEQALYAAVEAAAGVVQEALAVRDYGAYFRAI 689 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ F D+VLV +D +R NRL+LL+ + + Sbjct: 690 AGLRPAVDAFLDRVLVMAEDPALRANRLALLKRVAGL 726 >gi|282899452|ref|ZP_06307419.1| Glycyl and Arginyl tRNA synthetase [Cylindrospermopsis raciborskii CS-505] gi|281195716|gb|EFA70646.1| Glycyl and Arginyl tRNA synthetase [Cylindrospermopsis raciborskii CS-505] Length = 716 Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 194/710 (27%), Positives = 326/710 (45%), Gaps = 80/710 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + +L+ G+ + + + TP RL + + GL Sbjct: 1 MTAFLLEVGTEELPASFLSSAITQWRSRIPQMLEAHGLPIEKVAVFGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP + G KA +GF + G++ +S +++ KGD + Sbjct: 61 SQQLDREEEIKGPPAQAAFKDGKPTKAAEGFAKKQGVE-LSALEVRST-DKGDFIFVNKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R I ++L +VP + + + MRW + S RP++ ++ +L + Sbjct: 119 TPGRPITEILTELVPQWVWSLEGKRLMRWGSGDGRFS-----RPIRWLVALLDGD----- 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L+ + I++ HR P + + Y++ L V++ PE R I+ Sbjct: 169 VLPLELRNGEKIVKSDRISWVHRVLHPEAVSISHATEYVKTLANGYVIVSPEDREKIIVE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +R +G LL E LVE+ +G F+ ++L LP E+ + T+Q+ F Sbjct: 229 QVNRAVEELGGCTEIYPYLLAETTNLVEYPTAVVGRFEDEFLQLPTEVSTTVMVTHQRYF 288 Query: 291 -VTRTREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 V + R+G +L N F+ +SN + I GN RV+ ARL D F++ Sbjct: 289 PVFKNRDGRELLPN-FVTISNGDPAKSDI-IALGNERVIRARLADGRFFYE--------- 337 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LI 404 DL+K L++ + +L+ V F +G+ +V+RI + + I Q L Sbjct: 338 -----------ADLAKSLEEFLPQLET--VTFQEDLGSVRAKVTRIGNIAQVICQQLGLG 384 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + + V RA +L KADL T++V EFPELQG +G++YA+ E+ AI EH PR Sbjct: 385 ETETERVQRAALLCKADLVTQMVYEFPELQGIMGEKYALASREDEEVAKAIFEHYLPRNA 444 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +PT V LAD+LDTLI+ + + PSGS DP+ALRRA I+ I + I Sbjct: 445 DDILPTTLTGKIVGLADRLDTLISIFGLGLIPSGSSDPFALRRAANAIVNITWVANLPIN 504 Query: 525 LSQFIE-------------DQNLIL----FFHDRLKLYLH-DRDIRHDLIEAILRPEN-- 564 L +E Q+LI FF R++ L ++ I +DL+ A+L ++ Sbjct: 505 LEYLLEYTATSFAHTFHKDAQSLISILQEFFIQRIRTLLQEEKHIDYDLVNAVLGEQDPE 564 Query: 565 ------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISP 616 +LL I D +L + + EK + R ++ A + +++ + I+P Sbjct: 565 YIERALQDLLDIRDRATYLQQIRHNGTLEKIYETINRSTRLAAQGDLDLQQLIPDELINP 624 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 +E LY + Q + + Y + L I + FFD Sbjct: 625 TLFQKSSETALYQALVALVPQTQLAQQTRNYQLLIGALEKIAPTVSQFFD 674 >gi|123966059|ref|YP_001011140.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9515] gi|123200425|gb|ABM72033.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9515] Length = 719 Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 203/758 (26%), Positives = 354/758 (46%), Gaps = 97/758 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA H + + ++ + Y+N+ TP R+ L+L+GL Sbjct: 1 MSKYLLEIGTEELPANFSHSVINQIYSNIKFEFDKKLIKYKNIICTSTPRRIVLFLEGLV 60 Query: 61 PHSPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ +K R GP+ A +A GF S G+ I D QI+K +KG+ Sbjct: 61 DYADDKRVTRKGPKASAAFLNGVPTQAALGFANSLGI-NIEDLQIRK-TEKGEFVFGTKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L I+P I+ + P+ M+W +F + RP++ I+ + ++ Sbjct: 119 EKGESTKSALSLIIPKLIKNLQGPRFMKWG-----YGSFKFSRPIRWIVSLY-----DDE 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+D E I GN + GHR I++QS +Y + E+ V ++ E R+ I N Sbjct: 169 ILDFAFDECDPRIKIGNKSNGHRL-INKVIEIQSSYNYFGLMAESGVFVNREERKEKIDN 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 ++ + + L+ + LL E+ LVE + +FDK++L LP E++ +K +Q+ Sbjct: 228 LINQESQLLKLDPSLSESLLNELTDLVESPNLITCNFDKQFLNLPVEVLSTVMKNHQRYI 287 Query: 291 -----------VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 + + E +++ F ++SN + I +GN +V+ AR DA F + Sbjct: 288 PLLKKNKKFSKLGLSSEEIISTKFFVLSN-GLKESNNTIAKGNEKVLRARFSDARFFVES 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ N+ + K + V + +G +RV RI+ +K Sbjct: 347 DKKVASNVRNEK----------------------LKSVSYLKGMGNVFQRVKRIQATSEK 384 Query: 400 IAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENIS--CCDA 454 I ++ D + A K DLC+EIV EFPELQG +G +Y L+NE S C A Sbjct: 385 ILNYLNDQSLDSNKIIEAAKYCKNDLCSEIVYEFPELQGIMGGKY--LRNEGFSKEICIA 442 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 + EH PR +++P+ K VS++DK++TLI+ + ++PSGS DPYALRR G+I Sbjct: 443 VAEHYLPRFYKDDLPSTKYGAIVSISDKIETLISIFISGKRPSGSSDPYALRRNLNGVIL 502 Query: 515 IILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHD 554 II + ++DI + + +LI F + R+ +L + I D Sbjct: 503 IIWQFELDIAIENIFRELIEYWEISLPNLKFEKEKVLTDLIEFSNQRIASHLDELSISKD 562 Query: 555 LIEAILRPEND---NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 +I+A ++ ++ I+DL K +N + F K I ++ + E N + S Sbjct: 563 VIKATCFTDSSVETRIVNILDLKKRINTIKQLKEKANFSEIQKVISRVCKLAESGNLKRS 622 Query: 612 L-----EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + ++P E E +++ I + I S + Y ++ +L + + FD Sbjct: 623 IFASKDYVNPNLFEKECETKVFQFIKEIEVFI--SSTNWDYFELFNLFENNTNNLNELFD 680 Query: 667 Q---VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VL+ +D E+++NRL+LL I+N L + + K+ Sbjct: 681 NDKGVLIMSEDPEIKNNRLNLLGLIRNYSLKIADFTKL 718 >gi|218509788|ref|ZP_03507666.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli Brasil 5] Length = 257 Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 109/234 (46%), Positives = 143/234 (61%), Gaps = 2/234 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPK+MRW S A W+RPL+SI+C E + I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKAMRWGKASSKSGALRWVRPLQSIVCTFGPEHEETTFIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I NITYGHRFHAP I V+ D Y LE+A P CR + A R Sbjct: 181 DGIIASNITYGHRFHAPEAITVRRFDDYAASLEKAKG--HPRCRAAQGYHPARR 232 >gi|224418133|ref|ZP_03656139.1| glycyl-tRNA synthetase subunit beta [Helicobacter canadensis MIT 98-5491] gi|253827460|ref|ZP_04870345.1| Glycine--tRNA ligase [Helicobacter canadensis MIT 98-5491] gi|313141668|ref|ZP_07803861.1| glycyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253510866|gb|EES89525.1| Glycine--tRNA ligase [Helicobacter canadensis MIT 98-5491] gi|313130699|gb|EFR48316.1| glycyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 680 Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 211/723 (29%), Positives = 338/723 (46%), Gaps = 74/723 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI ++E+PA ++ +L E+ + + ++TP RL L K Sbjct: 5 FLLEIGTQELPAIPLLTELPNIKPKFAKIL-EKYRLLCDFDFFYTPRRLVLIAKQFPITQ 63 Query: 64 PEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E GP + K A GF + G+ + KD K ++ P+ Sbjct: 64 KSQTLEFFGPPLNIAYKDNEPTQAALGFFKKCGITQQEVTTLIKDDK--EILYFKKESPQ 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +D+L+ I ++ + + KSMRW S+IRP+ ILC+L + +I Sbjct: 122 TPAQDLLQIITQEFLESLNFGKSMRWGNHKE-----SFIRPISWILCLL-----NDTLIP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L L I + T+ HR + +V SLD+Y + L+ ++L + RR IL + + + Sbjct: 172 LHLYGINSKSQTFVHRNISFDAKEVTSLDNYFQVLQGGKIILKQDQRREKILQEIQAIQT 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+++ D++LLEEI+ + E+ G F + +L LP I ++K NQ+ F T E Sbjct: 232 QKGIKVEIDEELLEEIVSITEYPTALFGEFSEHFLELPPPCIITSMKINQRYFATYKNEK 291 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++VSN S+ I++GN +V+ ARLEDAL F+ D N N LKE Sbjct: 292 -LHNGFVMVSN-SLSEKNQIIIEGNVKVLKARLEDALFFYHNDLKNGLNPEKLKE----- 344 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---------IDADV 408 V F +GT ++ R R + K +A L + Sbjct: 345 -------------------VTFVEGLGTMWDKTQRERQIIKILAPLYQKYFNSQDFGLTL 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++D+A LSKADL +E+V EF +LQG +G YA + AI+E P + Sbjct: 386 EILDQASNLSKADLMSEMVYEFTDLQGIMGYYYANALGYESNVALAIKEQYLPNSEESPL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI----- 523 P+N IS V+LA KLD L +++ + PSGS+DP+ALRRA +G+I+IIL + Sbjct: 446 PSNLISAFVALAYKLDNLFGLFSVKKIPSGSRDPFALRRAAIGMIKIILHFDLPFDLKKI 505 Query: 524 -----PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 PL + + Q L F +RL L L+ A+L +LL I + L+ Sbjct: 506 FSLIAPLYRPFDLQQLENFILERLDSML---SFNASLLRAVLATGERDLLQIYQKLSVLD 562 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 S K + L + ++ I ++ N L I LL E LY F + Sbjct: 563 ---SILKNQDKALLTQTFKRVANITKEINLNSDLPIKADKLLASEEIELYKA---FCAYE 616 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++S+ Q+ +LL ++ + FFD+VLVN D + ++NR +L+ I L + ++ Sbjct: 617 EKSLTLNYQEQLENLL-ALNPLLSRFFDKVLVNAPDEDFKNNRKNLIARIYKAFLKIADI 675 Query: 699 QKI 701 ++I Sbjct: 676 KEI 678 >gi|218507883|ref|ZP_03505761.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli Brasil 5] Length = 244 Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 107/242 (44%), Positives = 160/242 (66%) Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 KP+GP + VP +K++IT++LADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE Sbjct: 1 KPQGPSDRVPEDKVAITLALADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLER 60 Query: 520 KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ +PL D +L+ FFHDRLK+YL D+ R+DLI+A+L P+ D+LL + ++ L Sbjct: 61 RVRLPLLATTRDGDLLSFFHDRLKVYLRDQGARYDLIDAVLTPDADDLLMVARRVEALTA 120 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F +S G+ L KR Q+LA EEKK I+ +SP L L+AEK L++ IS Sbjct: 121 FITSEDGKNLLAGTKRATQLLAAEEKKGTVIADGVSPALLKLDAEKELFSAISSASKDAA 180 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ + + + L + ++ FF++VLVN +D +R NRL+LL+ I+ V + Sbjct: 181 DAVAGEDFRSAMEALSKLRGAVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFS 240 Query: 700 KI 701 KI Sbjct: 241 KI 242 >gi|332296312|ref|YP_004438235.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfobium narugense DSM 14796] gi|332179415|gb|AEE15104.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfobium narugense DSM 14796] Length = 691 Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 200/733 (27%), Positives = 342/733 (46%), Gaps = 81/733 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKE--EG----VIYQNMRQYWTPHRLFLY-- 55 +LLEI EE+P D I + E +G +I Q+ Y TP R+ L+ Sbjct: 3 YLLEIGCEEMPFNFASSVCVDFKEIFLSKFSEIFDGKDLEMIKQSTECYATPRRIVLFSS 62 Query: 56 LKGLSPHSPEKIEERLGPRV----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L +P + +KI+ GP V + K + + IS + D + Y+ Sbjct: 63 LPDFTPETKQKIK---GPPVRFAYDSNMKPMPALFKFVEKFNISVDDVMIDKSESGEYVV 119 Query: 112 VLRKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + K L I D++ I+P + ++ PKSMRW + ++RP++ IL I + Sbjct: 120 FYKTDKGLKISDIIPNILPKIVSELKMPKSMRWG------AGIRFVRPIRWILSISDSGH 173 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 K + L + T+ RF +V S++ Y ++E +++D R I Sbjct: 174 VK-----VHLGRLESDKFTFLERFAPNEQHEVNSIEDYFNIMKEKNIIVDHNERAKMIDF 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + +++ + ++V D++LL E++ LVE + F+GSF+ ++L LP E++ + +Q+ F Sbjct: 229 EINKVLNK-SQKIVCDENLLREVLFLVESPKAFLGSFNSEFLNLPREVLITVMARHQRYF 287 Query: 291 -VTRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLS 348 V ++ N V I + IV+ GN +V+ ARL DA+ F K+D Sbjct: 288 AVVDNNNQIMPN---FVGIINGVNKDTKIVRAGNEKVLKARLSDAMFFMKKD-------- 336 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-- 406 L+K L R+ D++ V + +G ++ RIR L + D Sbjct: 337 ------------LTKKLRDRLD--DLVSVSYLEGLGNYLDKTFRIRELSLAFNRFFDINL 382 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D L+ + L K DL T++V EFPELQG +G+ YA + + AIEEH P Sbjct: 383 DEELIKNSSTLLKCDLVTQMVFEFPELQGIMGRIYAEKEGIDPEIARAIEEHYLPISMKS 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +PT + S +DK D L + N PSG+ DPY RRA+ G++RI+++ + L Sbjct: 443 PLPTTLLGKLFSFSDKCDHLFMSFLNNLTPSGAGDPYGQRRASAGVLRILMDIGYENELE 502 Query: 527 QFI----------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + LI F R+ D R+DL++A+L D + Sbjct: 503 EIFNFALNSISYITTLPSRDISQLISFMKTRMSSLFIDMGYRYDLVDAVL----DITSSP 558 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR-LYA 629 V + L+ +K + F I ++ I K ++ + S LL+E ++R LY Sbjct: 559 VKAKRRLDVLTEWSKRKDFFDIVSTIIRLGRIISDKEELVAFDSS---LLVERDERELYE 615 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +++++ +K+Y +I +++ ++ PI FF+ VLVNV+D+++RDNR +LL I Sbjct: 616 KFINNKDKLEDAIINKKYDEILNIIINLSGPIHTFFENVLVNVEDKKIRDNRKALLNLIS 675 Query: 690 NIILIVINVQKIV 702 + N +KIV Sbjct: 676 LPFFRLWNWKKIV 688 >gi|222099442|ref|YP_002534010.1| Glycyl-tRNA synthetase beta subunit [Thermotoga neapolitana DSM 4359] gi|254781869|sp|B9K6R1|SYGB_THENN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|221571832|gb|ACM22644.1| Glycyl-tRNA synthetase beta subunit [Thermotoga neapolitana DSM 4359] Length = 670 Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 191/729 (26%), Positives = 350/729 (48%), Gaps = 89/729 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA + E L LLK + ++ + R + L+GL Sbjct: 1 MRTALLEVGLEELPASEFYNILEQLETRTRELLKANRIQCDSIEVFVGSRRFGVLLRGLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +EE+ GP + GA +A++GFLR T D I+KD G VY++ Sbjct: 61 EKQEGFVEEKKGPPLNVAYDSKGAPTRALEGFLRKNN-ATFEDI-IEKD---GYVYIS-- 113 Query: 114 RK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 RK + +E+VL + + + + K MRW T + ++RP+ I+ +L Sbjct: 114 RKIEGKAVEEVLPEVFEDLVMGMSFKKPMRWGT-----GEYEYVRPVHWIVAML-----D 163 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++++L L + +++YG R+H+ +K+ + + Y L+ V+ E R+ ++L Sbjct: 164 DRVLNLTLFGLRASHVSYGKRYHSG-ALKINTPEEYYEVLKSGYVMASHEERKKSVLKQL 222 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 G+++ D+ L+ EI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ FV Sbjct: 223 EDFERTYGMKVERDEALIAEIVAMTEYPRILVGQFDQKYLELPEEIIVTAVKHHQRAFVA 282 Query: 293 RTREGVLANCFILVSNI-QASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G L N F+ + Q+S+ +V+G RV+ ARLEDA ++ Sbjct: 283 H-KDG-LTNFFVAFQDGPQSSEN---VVKGYERVINARLEDARYY--------------- 322 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 F+ DL L + RL +VF ++GT ++V RI + +KI + Sbjct: 323 -----FHKDLEMSLGEMNERLK--GIVFQERLGTLYDKVERIVKISRKICGELKFPEDFT 375 Query: 412 DRAI---VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++ + L KAD+ +++V EFPELQG +G+ YA+ + + AIE+H EN Sbjct: 376 EKVLKVASLCKADIASKVVYEFPELQGVMGRIYALKEGMDEELAFAIEDHYS-----EN- 429 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P I + +AD+LDT++ +AI P+ SKDPY L+ + RI+ +N+ D+ L + Sbjct: 430 PETVIGSVLGMADRLDTIVGNFAIGNIPTSSKDPYGLKGKADTVFRIVRKNEWDVSLEEL 489 Query: 529 IE----------DQNLILFFHDRLKLYL-HDRDIRHDLIEAI----LRPENDNLLTIVDL 573 + +L FF R +L ++ + +D+ A+ +P L + Sbjct: 490 LNFAASLVGFHLSNDLEEFFSSRFYQFLINEIGVSYDVARAVNHLWKKPLRGTLAA--EA 547 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +++++E + + + +R+ I + S E E EKRL + Sbjct: 548 LQNISE---RPEFQDLFVGFERVHNI------TKKHDSREFDGALFEKEEEKRLMNKFFE 598 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + ++++ Y + L + I+ +FD V V V+ ++R NRL L+ I ++ + Sbjct: 599 VKEKVLKALERLNYEEALQYLIELKPYIDEYFDNVFVMVNRDDLRMNRLGFLKNIDDLFM 658 Query: 694 IVINVQKIV 702 ++ ++ +V Sbjct: 659 MIGDMSHLV 667 >gi|315453371|ref|YP_004073641.1| glycyl-tRNA synthetase beta chain [Helicobacter felis ATCC 49179] gi|315132423|emb|CBY83051.1| glycyl-tRNA synthetase beta chain [Helicobacter felis ATCC 49179] Length = 691 Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 194/734 (26%), Positives = 333/734 (45%), Gaps = 85/734 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA+ ++ L++ G+ + ++TP RL LY H+P Sbjct: 6 LIEILVEEMPAKPLLDELPNIPKKFCHSLEKHGLGGTALEVFYTPTRLVLYAPNFPTHTP 65 Query: 65 EKIEERLGPRVGAGKKAIDGFLRST------GLQTISDCQIKKDPKKG-----DVYLAVL 113 EE GP + G G T GL+ + + + + G +V A Sbjct: 66 AITEEFFGPPLDIGTNVEKGVKEGTRVLNPIGLKFYAKLNLPPNLEVGMKNNKEVLYATK 125 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED--- 170 R +L I+ + + + KSM W + +IRP+ ++ I +ED Sbjct: 126 RTEPIPTATLLDDILLHFLGALDFGKSMAWGALKA-----RFIRPIHNLCVIFGSEDIDL 180 Query: 171 -AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 A K + + G +H + Y + LEE V+LDP RR IL Sbjct: 181 SACTNTYGCSAKRATKLHFSKGFGYH-----DTPDISTYFKTLEEGFVILDPLKRRTRIL 235 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + H L + + D +LLEEII + + G F+ +L LP E+ +++T+Q+ Sbjct: 236 DQIHALEDQHHMRVEVDPELLEEIIAITAYPTALYGEFEAHFLQLPTEIATTSMQTHQRY 295 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F T ++ L + F++VSN+ + + I+ GN +V+ ARL DA+ F++ D Sbjct: 296 FPT-FKDSSLHHGFVVVSNLPSKGDFSQIIAGNEKVLKARLSDAIFFYQND--------- 345 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---- 405 L L+ + + + F +G+ ++V R + +G A L+D Sbjct: 346 -----------LQTSLEWEVVGPKLEQISFMQGLGSLKDKVEREQRIG---AWLVDRYGE 391 Query: 406 -ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + LV + + L+KADLC+E+V EFPELQG +G YA N C AI+E P Sbjct: 392 ESMRPLVQKILELAKADLCSEVVYEFPELQGIMGGYYAKHHNHPQEVCQAIQEQYLPTSE 451 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +P++ ++ +LA KLDTL++ +++ + P+GSKDP+ALRRA G++RI L ++D Sbjct: 452 NAPLPSSLLAALSALAIKLDTLLSLFSVGKIPTGSKDPFALRRACNGVLRICLHYQLDFN 511 Query: 525 LSQFIED-------------QNLILFFHDRLKLYLHDRD--IRHDLIEAI--LRPENDNL 567 L+ ++ Q+ IL +R L D D +++ + L+ EN + Sbjct: 512 LASDLQTIARFYAPFEWTLLQDFIL---ERFTHVLGDFDPSFYRAVLKGLQTLKSENYGI 568 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I ++ L+ FF+ + KR+ I + + L+ P +E L Sbjct: 569 CQIAHKVQALHVFFAQENTADLVAIFKRVANITQL------DTLLQTDPALFTDSSEHAL 622 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y + M+ + L + +P+E FF++VLVN + +V++NR LL Sbjct: 623 YETYENIA-----RMEFGNFLDKLKALSHLKQPLENFFEKVLVNDPNLQVQNNRKGLLAL 677 Query: 688 IKNIILIVINVQKI 701 I + L V +++ + Sbjct: 678 IYHAFLDVADIKDL 691 >gi|332283303|ref|YP_004415214.1| glycyl-tRNA synthetase beta chain [Pusillimonas sp. T7-7] gi|330427256|gb|AEC18590.1| glycyl-tRNA synthetase beta chain [Pusillimonas sp. T7-7] Length = 717 Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 194/680 (28%), Positives = 313/680 (46%), Gaps = 77/680 (11%) Query: 46 YWTPHRLFLYLKGLSPHSPE-KIEERLGP-RVGAGKK-----AIDGFLRSTGLQTISDCQ 98 + TP RL + L + +PE + E+L P ++G + A+ L S L+ ++ Sbjct: 57 FSTPRRLAVRLSAVLGQAPEQRYTEKLMPAKIGLTETNEITPALAKKLASKHLEHLTAAD 116 Query: 99 -IKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIR 157 I + K D A L++ L+ + AI +P PK MR+ +S+ ++R Sbjct: 117 LIHESDGKQDYLYAQGVSSGALLDPALQEALDYAITHLPIPKVMRYQLADG-VSSVKFVR 175 Query: 158 PLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAM 216 P ++ + E++ID+ + G T GHRF + I++ + Y + L +E Sbjct: 176 PAHQLVALW-----GEQVIDIQALGLKSGRKTLGHRFMSTQVIELTDPNTYEQQLLDEGK 230 Query: 217 VLLDPECRRNAI----LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYL 272 V+ RR I L A L + +G D LL+E+ LVE V++G F++++L Sbjct: 231 VIASFTDRRTLISEQLLEQAQALGATIGTGSEVDA-LLDEVTALVEHPTVYVGEFEQQFL 289 Query: 273 CLPEELIRLTIKTNQKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 +P E + LT++ NQK F + G L + F++VSN+Q +D + I+QGN RVV RL Sbjct: 290 GVPPECLILTMRLNQKYFPLFEPDTGKLTHRFLIVSNMQIADP-SHIIQGNQRVVRPRLA 348 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F FN DL PL R+ + + V+H K+GTQ RV Sbjct: 349 DAQFF--------------------FNTDLKTPLADRV--VSLASSVYHNKLGTQLNRVE 386 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R+R L + IA+ + AD+ RA +L+KADL + +V EFPELQG +G YA E Sbjct: 387 RVRKLARHIAEQLGADITHAGRASLLAKADLNSSMVGEFPELQGIMGAYYAAADGEADDV 446 Query: 452 CDAIEEHLKPR--GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRAT 509 AI + R P+E P + V +A++++TL+ W I P+G +DPY LRRA Sbjct: 447 VLAIRNQYRIRLDTPIE--PATLTAAIVFMAERIETLLGIWGIGLAPTGERDPYGLRRAA 504 Query: 510 LGIIRIILE----NKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 LG+I + ++I + + +L+ + +L + D + +EA + Sbjct: 505 LGLISAFEQLQAGGYLNISDTTTLNLHDLLHHAANTFELGVIAADTVAE-VEAFIYERYR 563 Query: 566 NLLT------IVDLIKHLNEFFSSA--------------KGEKFLLSAKRIFQILAIEEK 605 NLL+ ++D + L + E + KRI +L K Sbjct: 564 NLLSHDFNRHVIDAVLALKPALHQVHARSAACAAFAQRPEAESLSAANKRIANLL----K 619 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 K + L AEK L +I+ QE + + + ++ FF Sbjct: 620 KADAAPSSLDHSQLSDPAEKALADIIAKLEPQAQEQFAQGNFSGSMATMAQAKDAVDAFF 679 Query: 666 DQVLVNVDDREVRDNRLSLL 685 + V+V DD +R NRL+LL Sbjct: 680 NDVMVMADDPAIRANRLALL 699 >gi|166367631|ref|YP_001659904.1| glycyl-tRNA synthetase subunit beta [Microcystis aeruginosa NIES-843] gi|166090004|dbj|BAG04712.1| glycyl-tRNA synthetase beta chain [Microcystis aeruginosa NIES-843] Length = 710 Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 186/636 (29%), Positives = 288/636 (45%), Gaps = 63/636 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+PA A + L+ E + ++ Y TP RL + + GL Sbjct: 2 DFLLEVGTEELPADFVDSAIAQWRERVSKSLETESLDATAIQVYATPRRLAVLITGLPTE 61 Query: 63 SPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP V A K A +GF R G+ T + D KG+ P Sbjct: 62 QEARSEEIKGPPVSAAYKNGQITPAGEGFARKQGVSTAAFSIRATD--KGEFVYIEKTIP 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++P I ++ + MRW + RP++ +L ++ E ++I Sbjct: 120 GRPTAEILTELIPQWITRLEGRRFMRWGDGD-----LRFPRPIRWLLTLVDGEVLPLELI 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + +T+GHR P + + Y+ L V DP+ R+ I LA Sbjct: 175 N-GSTTLTSDRLTFGHRILHPQSLAISHPQAYLTSLRSIFVEADPQVRQQIITAQITTLA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DLL E+ LVE+ +G FD ++L LP E+I + T+Q+ F +T + Sbjct: 234 KKLKGVAEIPADLLAEVTNLVEYPTAIVGKFDDEFLELPPEVIITVMVTHQRYFPVKTPQ 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+ FI +SN I GN RV+ ARL DA F Sbjct: 294 G-LSPYFITISNGDPQKS-EIISAGNERVIRARLADARFF-------------------- 331 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDR 413 + D +PLD + +L+ V F ++GT ++V RI + + I + ++ D + ++ Sbjct: 332 YTADCDEPLDSFLPQLET--VTFQEELGTMRDKVDRIMEIAQMIVEQLNLDEQSRSDIES 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L KADL T++V EFPELQG + ++YA++ E+ I EH PR + +P Sbjct: 390 TAMLCKADLVTQMVYEFPELQGVMAEKYALISGESAVVARGIFEHYLPRNAGDILPETIT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 V +AD+LDTL+ + + P+GS DP+ALRRA II II +I L IE Sbjct: 450 GQVVGIADRLDTLVGIFGLGMLPTGSSDPFALRRAANAIISIIWSANFNINLLALIEQIA 509 Query: 532 -------------QNLIL-FFHDRLK-LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 NLI FF RL+ L + D I +DL+ A+L END + Sbjct: 510 KDFVTCHPDKPNPANLIKDFFLQRLQTLLIDDLRIDYDLVNAVLG-ENDPEYK----SRA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 L + + +FL ++ Q+ I E NR L Sbjct: 565 LENLLDTRERARFLCQIRQDGQLANIYETVNRSTRL 600 >gi|33519504|ref|NP_878336.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia floridanus] gi|33517167|emb|CAD83549.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia floridanus] Length = 661 Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 171/586 (29%), Positives = 287/586 (48%), Gaps = 67/586 (11%) Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 MRWS+ ++ S++RP+ ++ +L ++ ++ E I YGHR+ + I Sbjct: 112 MRWSSVNT-----SFVRPVNTVTVLL-----DTNLVQGNIFETEIDRIIYGHRYVKNNKI 161 Query: 201 KVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELVE-DKDLLEEIIGLVE 258 + Y L ++ +++D + R+ I AS +G + E D+ L+EI LVE Sbjct: 162 ILGHAKDYPSILSKQGCIIVDYQVRKETIRLAVKEQASKIGGAIDERDEKFLDEITSLVE 221 Query: 259 WVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV--LANCFILVSNIQASDGGA 316 W V G F+K++L LP ELI +K NQK F ++ + L FI+V N +D + Sbjct: 222 WPVVLCGKFNKRFLELPNELIIHIMKCNQKYFPVYDQKSINILLPYFIVVVNTITNDY-S 280 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQ-----NNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 I+ G+ ++ RL DA +F K+D + +P L S Sbjct: 281 KIIAGHENIIKMRLMDAEYFIKKDSRYRLIDYIPKLKS---------------------- 318 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 +VFH+K+G+ ++V+RI L IA+ I D+ RA L K DL T++V EFP Sbjct: 319 -----IVFHSKLGSILDKVNRITELAGWIAEQIHEDIIDSKRAAYLCKCDLVTDVVLEFP 373 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 E+QG IG YA E+ A +EH +P+ + +P IS VS+AD++DT+ + Sbjct: 374 EVQGIIGMYYARRDRESEKVAIAQKEHYQPKYVTDKLPMECISCIVSIADRIDTISGIFG 433 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--------------- 536 I E P+GS+DP+ L+RA GI+ I ++ KI + L I ++ Sbjct: 434 IQEFPTGSRDPFGLKRAATGILNIFIQKKISLNLLNLIHKSVMLYGPKLINVEDIKNHIY 493 Query: 537 -FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA-- 593 F RL LY + + ++++++L + N+ D I +N F++ E +++ Sbjct: 494 SFMCKRLGLYYYSLGYKKNIVKSVLNTDISNIAYCNDRIDTINSFYNMKIVECAMINTLY 553 Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KRI IL + +K +E +LL + RL+ I++F I+ D Y I + Sbjct: 554 KRISNIL--KNQKIYHCKIEDVDVTILLYKDMRLFEKITEFDRTIRLLFDKNCYDIILEE 611 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + ++ + F D VL+ DD+ ++ NRL LL IK +I V+++ Sbjct: 612 MVNLSKLTHNFIDTVLILHDDQLIKTNRLILLNVIKKLIYTVVDIS 657 >gi|268680124|ref|YP_003304555.1| glycyl-tRNA synthetase subunit beta [Sulfurospirillum deleyianum DSM 6946] gi|268618155|gb|ACZ12520.1| glycyl-tRNA synthetase, beta subunit [Sulfurospirillum deleyianum DSM 6946] Length = 683 Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 206/721 (28%), Positives = 336/721 (46%), Gaps = 67/721 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA K + + +L E+ + Y+TP RL L+ + Sbjct: 6 LIEIGVEELPAIPFLKELPTIEKQWLDIL-EKNALACAFEFYYTPRRLVLWHESFPTEQG 64 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 EK EE G + GA A GF + G++ KD K+ Y KR Sbjct: 65 EKEEEFFGAPLSVALKDGAPTPAALGFAKKCGVEFSEIATAMKDGKEVLYY-------KR 117 Query: 119 LI-----EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 I + +LK ++ I+ + + KSMRW S+IRP++ C+L E Sbjct: 118 TIAPQSSKPLLKEMIEQFIKGLNFGKSMRWGFLEE-----SFIRPIRWFGCMLGDEH--- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + L + +Y HR + P Y L E V+L P R ILN Sbjct: 170 --VPFSLFGVESTPFSYPHRTISYEPFAYMFAGDYFERLAERGVVLYPSKREEIILNAFK 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + G+ + D +LL E++ + E+ +GSF++++L LP E+I ++K NQ+ F Sbjct: 228 AIEAKEGVSIEIDAELLAEVVAITEYPTALIGSFEERFLRLPPEVIITSMKENQRYFPV- 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L N FI+VSN SD IV+GN +V+ ARL DA+ F D LK+ Sbjct: 287 FKEGKLTNRFIVVSN-AISDDYDLIVKGNEKVLRARLSDAIFFLDNDLKKGLCYEGLKDI 345 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 LD L + R + + A+ + R+L + + AL+++ Sbjct: 346 TY---LDGLGSLMDKTKREKAIALYLSAQY--------QERLLAEHSRLNPQSLNALMEK 394 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +++ +K+DL +E+V EF ELQG +G YA E+ A++E P +P+ Sbjct: 395 SVLYAKSDLLSEMVYEFTELQGLMGYYYAKEAGEDELFALALKEQYLPNSEESALPSTLF 454 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI--DI-----PLS 526 S V+LA KLD+LI ++IN+ P+G+KDPYALRRA GI++I+LE I DI L+ Sbjct: 455 SAIVALAYKLDSLIALFSINKIPTGNKDPYALRRAVNGIVKIVLEQGIAFDISKDLKALA 514 Query: 527 QFIEDQNLIL---FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 Q + + L FF +R+ + D+ +I A++ +++ + I+ L Sbjct: 515 QGYKAFDFALLESFFLERMYQFF---DVNPSIISAVISSGERDIVRLSLKIQALATMVQD 571 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--AEKRLYAVISDFGTHIQES 641 ++ + KR+ I+ KN +++ +S L E E L+ S ES Sbjct: 572 DGFKEMFSTFKRVANII-----KNMDMNQTLSINQALFENAYETALFDAFSAVNAKNYES 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + D L ++ I+ FFD V+VNV++ E+R NR +L+ I + ++++I Sbjct: 627 FEAHL-----DALFALKPHIDAFFDNVMVNVENPELRANRQNLIGSIYTAFKSIADIKEI 681 Query: 702 V 702 Sbjct: 682 T 682 >gi|257452608|ref|ZP_05617907.1| glycyl-tRNA synthetase beta chain [Fusobacterium sp. 3_1_5R] gi|317059148|ref|ZP_07923633.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 3_1_5R] gi|313684824|gb|EFS21659.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 3_1_5R] Length = 687 Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 197/729 (27%), Positives = 356/729 (48%), Gaps = 98/729 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE PAR A +L + K E + + ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEENPARFLEPALAELKKNFMNKCKAERIAHGEVKMYGTPRRLILCAEEVAEQQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-- 115 + E +GP G +A GF +S G+ + I+ D KG+ Y+A + Sbjct: 63 EDLNELNIGPAKSIAFLNGEITRAGIGFAKSQGIDPVDLEIIQTD--KGE-YIAARKSLQ 119 Query: 116 ---PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K L+ ++LK++V ++ +PKSM+WS + RP++ L + A Sbjct: 120 GQATKTLLPELLKSLVL----ELSFPKSMKWSDLK-----IRFARPIEWFLAM-----AD 165 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ +++ + N + GHRF V S++ Y + E V++D + R+ I D Sbjct: 166 SEVVEFEIEGMKSSNHSKGHRFFGKE-FTVNSVEDYFVKIRENNVIIDIQERKKMIREDI 224 Query: 233 -HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ++A ++V ++ LL E+ LVE+ +G+F+ +L +P+E++ ++++ +Q+ F Sbjct: 225 LSKIAE--DEQVVIEEGLLSEVTNLVEYPYPIVGTFNSDFLEVPQEVLIISMEVHQRYFP 282 Query: 292 TRTREGVLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSS 349 + G L F+++ N I+ SD + GN +V++ARL DA F+K D +N+L N Sbjct: 283 ILDKNGKLLPKFVVIRNGIEDSDN---VRIGNEKVLSARLADARFFYKEDLRNHLEN--- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 N++ K VVF +GT ++++R ++I +++ A + Sbjct: 337 --------NVEKLK------------HVVFQKDLGTIYQKITRT----QEICEILLAKLH 372 Query: 410 L------VDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 L V R L+KADL + ++ +EF +LQG +G +YA+ E I EH P Sbjct: 373 LEEKRETVLRTAYLAKADLVSNMIGEKEFTKLQGFMGADYALKFGEKEEVSKGIREHYYP 432 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P I V +AD+LDTL+ + + PSGSKDP+ALRRA LGI+ IIL +K+ Sbjct: 433 RFQGDELPQVVEGILVGIADRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNIILNSKL 492 Query: 522 DIPLSQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 D+ L + + ++ ++ FF RL + + + D++ A+L Sbjct: 493 DLSLRELVNASLDTLAKDGVLKRDRAEVEKEVMEFFKQRL-INVFSEKMDRDIVAAVLEV 551 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 ++++ + ++ L F + + L AKR+ I +E K+RE+++ + Q E Sbjct: 552 QSEDAMDAFTRMQALKAFLTEEGAKDLLDLAKRVGNI--SKEAKSREVNVTLFQQ----E 605 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 EK LY I+ + K Y + + E + +F+ V V ++ EV++NR+ Sbjct: 606 EEKELYHYTEKTKMEIESLVSDKNYAGYLAAVLASKEIVTKYFNAVKVMDENVEVQNNRI 665 Query: 683 SLLQYIKNI 691 S L + ++ Sbjct: 666 SQLGLLSSL 674 >gi|170079051|ref|YP_001735689.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. PCC 7002] gi|238692788|sp|B1XK79|SYGB_SYNP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169886720|gb|ACB00434.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7002] Length = 713 Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 193/731 (26%), Positives = 333/731 (45%), Gaps = 95/731 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +L+E+ +EE+PA A L + L E + + Y TP RL + ++GL Sbjct: 1 MATYLIEVGTEELPADFVAAAIAQLKDRVSHSLTEYFLTPDGIEVYGTPRRLAVLIQGLP 60 Query: 61 PHSPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP A KA +GF R G++ +S +++ +KGD + Sbjct: 61 DQQADREEEIKGPPAAAAFKEGQPTKAAEGFARKQGVE-LSALEVRPT-EKGDFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L+ +V + + MRW+ + RP++ ++ + + Sbjct: 119 TLGRPTPEILQELVLGWFTALEGRRFMRWADGD-----LRFPRPIRWLVSLW-----NDA 168 Query: 175 IIDLDL----KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L ++ G I+ GHR + + + Y+ L++A V ++P+ R I+ Sbjct: 169 VLPLELVNGSGKLEAGRISRGHRILHQGDVTLNNAADYVVTLQQAFVEVNPQVREEKIVA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A+ +G E DLL E++ LVE+ +G + ++L LP E+I + T+Q+ F Sbjct: 229 GVKAAAAEIGGEAEMPADLLAEVVNLVEYPTAVVGDIEAEFLELPTEVITTVMVTHQRYF 288 Query: 291 VTRTRE--GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD-----QNN 343 R R+ L FI +SN I GN RV+ ARL D F++ D + Sbjct: 289 AVRDRQDKTKLLPKFITISNGDPKKS-EIIAAGNGRVIRARLADGQFFYRADCDEHLETY 347 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ- 402 LP L + V F ++GT ++V RI + ++IA+ Sbjct: 348 LPQLEA---------------------------VTFQEELGTMRDKVDRIMEISQQIAEQ 380 Query: 403 --LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 L +AD ++ +L KADL T++V EFPELQG +G++YA++ E + + I EH Sbjct: 381 LGLSEADKEIIASTAMLCKADLVTQMVYEFPELQGIMGQKYALVSGEAPAVAEGIFEHYL 440 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P V + D+LDTL++ + + PSGS DP+ALRRA II + + Sbjct: 441 PRNADDILPQTLAGQVVGMGDRLDTLVSIFGLGMIPSGSSDPFALRRAANAIITVAWDAG 500 Query: 521 IDIPLSQFIED----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPE 563 ++I L + + + L FF R++ L D + I +DL+ A+L + Sbjct: 501 LEIDLGELLAQGAKDFVTAHPDKTSPLEALQSFFIQRIQTLLQDEKGIDYDLVNAVLGDD 560 Query: 564 ND-------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLE-- 613 + +LL + D L + K + R ++ A K N SL+ Sbjct: 561 AEYTERALTDLLDVGDRAAFLQSIRDDGQLAKIYATVNRSAKLAA---KGNLSTDSLDPT 617 Query: 614 --ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQV 668 I+P+ +E+ LYA + + + + + Y ++ D L ++ +E FF D V Sbjct: 618 GVINPEKFAQNSERDLYAGLVELVPTTEVARTERDYQKLIDGLAALAPTVERFFDGEDSV 677 Query: 669 LVNVDDREVRD 679 LV +D VR+ Sbjct: 678 LVMAEDPAVRE 688 >gi|15642990|ref|NP_228032.1| glycyl-tRNA synthetase, beta subunit [Thermotoga maritima MSB8] gi|11387212|sp|Q9WY60|SYGB_THEMA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|4980715|gb|AAD35309.1|AE001706_8 glycyl-tRNA synthetase, beta subunit [Thermotoga maritima MSB8] Length = 672 Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 195/729 (26%), Positives = 339/729 (46%), Gaps = 89/729 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H + L LLK V ++ + R + LK L Sbjct: 1 MRTALLEVGLEELPASEFHSILKQLEEKSAELLKAYRVSSGSVEVFVGSRRFGVILKNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA-- 111 + EE+ GP + G +A++GFLR+ + ++G VYL+ Sbjct: 61 ERQEDFTEEKKGPPLNVAYDENGKPTRALEGFLRNNNASLENVVH-----REGYVYLSRV 115 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V KP +E+VL + + + + K MRW + +IRP+ I+ ++ Sbjct: 116 VEGKP---VEEVLPDLFRDLVLGLNFRKPMRWGSGEH-----EYIRPVHWIVAMVDG--- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++DL++ + I+YG R+HA I++ + Y L++ V+ R+ +L Sbjct: 165 --RVLDLEIFGLRSSRISYGKRYHA-GSIEIPDSERYYESLKKGFVISSHLERKKFVLEQ 221 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 222 IDEFEKRSSMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFI 281 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L N F+ + +V+G RV+ ARLEDA +++++ Sbjct: 282 --AHKGTLTNTFVAFQD--GPQPPENVVKGYERVINARLEDARYYFQK------------ 325 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 DL PL++ +L ++VF K+GT ++V RI KKI+Q + D+ L Sbjct: 326 --------DLETPLEKMNEKLK--EIVFQEKLGTLYDKVERI----KKISQRLCEDLKLP 371 Query: 411 ------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 V A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H Sbjct: 372 GSFTQKVLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHYSEE-- 429 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 P I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI Sbjct: 430 ----PQTVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKSKADTIFRIIRKNEWDIS 485 Query: 525 LSQFIE----------DQNLILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDL 573 L + + + L FF R +L ++ I D+ A+ L I+ Sbjct: 486 LEELLTFASSLVGYRLSEELETFFAGRFYQFLINELGISFDVARAVNHLWKKPLRGILS- 544 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L E + + + +R+ I KN + S + E EK+L + Sbjct: 545 AEALQEISEKPEFQDLFVGFERVHNI-----TKNHD-STKFDGALFEKEEEKKLMNKFYE 598 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + ++++ Y + L + I+ +FD V V V ++R NRLS L+ I + + Sbjct: 599 VKEKVLKALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLSFLKNIDELFM 658 Query: 694 IVINVQKIV 702 +V ++ +V Sbjct: 659 MVGDMTYLV 667 >gi|220909945|ref|YP_002485256.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7425] gi|219866556|gb|ACL46895.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7425] Length = 731 Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 208/736 (28%), Positives = 329/736 (44%), Gaps = 116/736 (15%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIIL-----IGLLKEEGVIYQNMRQYWTPHRLFLY 55 M FLLE+ +EE+PA A E ++ LL+ + Q + TP RL + Sbjct: 1 MFSFLLEVGTEELPASFVASALEQWRSLIPNSLKANLLQGDTTTVQVL---GTPRRLAVL 57 Query: 56 LKGLSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 +KGL P++ EE GP V G KA GF RS + I+D I+ KG+ Sbjct: 58 IKGLPQRQPDQEEEIKGPSVQAAFKDGQPTKAAMGFARSRNVD-IADFDIRAT-DKGEFV 115 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 + R ++L ++P I + + MRW + RP++ ++ +L Sbjct: 116 FVRQKITGRPTAELLTELIPQWIFGLEGKRFMRWGDGD-----LRFSRPIRWLVALL--- 167 Query: 170 DAKEKIIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRR 225 +++++ L L+ I I++GHR P P+ + + Y+ LE A VL+D + R+ Sbjct: 168 --EDQVLPLTLENGATTISSDRISWGHRVLHPEPVTLLQAEDYLTALENAYVLVDSKQRQ 225 Query: 226 NAILNDAHRLASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 IL + V + D DL+EE+ LVEW +G FD ++L LP+E+ + Sbjct: 226 ERILEQLQVIEKEVKGIVPPDAINDLIEEVTHLVEWPNAVLGKFDAEFLTLPKEVTITVM 285 Query: 284 KTNQKCF-------VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHF 336 KT+Q+ F ++ E +L FI +SN + I GN+RV+ ARL DA F Sbjct: 286 KTHQRYFPVFDRAAFSQREELILLPYFITLSNGDPAQANL-IALGNARVIRARLADAKFF 344 Query: 337 WKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL 396 + D+ ++PL+ + RL V F +G+ ++V R+ Sbjct: 345 YDADR--------------------AQPLEAYVPRLGQ--VTFQQALGSMYDKVQRMLA- 381 Query: 397 GKKIAQLIDADVALVD-------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENI 449 IAQ + A + + + RA +L KADL T++V EFPELQG +G +YA L E Sbjct: 382 ---IAQFVCAQIKVPETEQQQILRATLLCKADLVTQMVGEFPELQGIMGADYARLSGEAA 438 Query: 450 SCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRAT 509 +AI H P T+ + V+L D+LDTL++ + + PSGS DP+ALRRA Sbjct: 439 MVAEAIAVHYLPPAIFTKTDTHLVGEVVTLVDRLDTLVSIFGLGLIPSGSSDPFALRRAA 498 Query: 510 LGIIRIILENKIDIP-------------LSQFIED-----------QNLILFFHDRLKLY 545 IIRII + P + QF + L FF R++ Sbjct: 499 NLIIRIIYKIASKNPQLQLNLQQLLQQCIEQFTAKFAKSTPAATLLEQLEDFFLQRIRNT 558 Query: 546 L-HDRDIRHDLIEAILR---PENDN--LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 L D I +DLI AIL PE L +I D I +F + + S RI++ Sbjct: 559 LDEDEQIDYDLINAILGEADPEYTQRALASIPDTIDR-AKFLQQMRQDG---SLDRIYET 614 Query: 600 LAIEEKKNREISLE---------ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + + R+ L+ I + L +E+ Y + D + + + Y Q+ Sbjct: 615 VNRASRLARQGDLDTVTLDPASVIQTKLLKQPSEQAFYQALVDLLPQTKAAQASRNYRQL 674 Query: 651 GDLLHSICEPIEIFFD 666 + + +I + FFD Sbjct: 675 VEAIAAIAPTVSRFFD 690 >gi|123968354|ref|YP_001009212.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. AS9601] gi|123198464|gb|ABM70105.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. AS9601] Length = 720 Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 201/749 (26%), Positives = 352/749 (46%), Gaps = 95/749 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA H E ++ L ++ + ++++ TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPANFSHAVLEQFKSLIEFELDKKLIKFEHIVVTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ +KI ER GP+ G A GF S G+ + + +IKK +KGD Sbjct: 61 DYAEDKIIERKGPKANSAYLNGCPTNAALGFANSLGID-VGELEIKK-TEKGDFVFGKKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L +I+P ++ + P+ M+W + S RP++ I I ++ Sbjct: 119 EKGLSTKISLSSIIPKLVKSLQGPRFMKWGAGNMKFS-----RPIRWIASIY-----NDE 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+D + E I N T HR +++Q+ D + L+ V+ + R+ I + Sbjct: 169 ILDFEFDECDPKIKINNKTKSHRL-INEVLELQNPDDFFELLKRNRVIAIRKERKEKIES 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ--- 287 ++ + ++ L+ + LL E+ LVEW + +G F ++L LP E++ +K++Q Sbjct: 228 LINQASKSLNLKPDLSEGLLNELTDLVEWPDLIIGKFSDEFLELPVEVLSTVMKSHQRYV 287 Query: 288 ------KCF--VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 K F + + E ++ F ++SN + I +GN +V+ AR DA F + Sbjct: 288 PLLLKNKSFSKLDLSSEKNISTTFCVISN-GLEESNNNIAKGNEKVLKARFSDAKFFVES 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K +++K N L V + +G +RV RI + KK Sbjct: 347 DK---------KVASIKRNEKLK-------------SVSYLKGLGNIFQRVERIEEVTKK 384 Query: 400 IAQLIDADVALVDRAIV----LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 I + ++ D +L ++ I+ K DLC+EIV EFPELQG +G +Y + + C A+ Sbjct: 385 ILKFLN-DKSLEEKKIIEAAKYCKNDLCSEIVFEFPELQGIMGGKYLKYEGFSEDVCLAV 443 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 EH P + +P+ K VS+ADK++TLI+ + ++PSGS DPYALRR G+I+I Sbjct: 444 AEHYLPSFYKDALPSTKYGAIVSIADKVETLISIFISGKRPSGSSDPYALRRNLNGVIKI 503 Query: 516 ILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDL 555 I + ++D+PL + + +L F R+ +L + + +L Sbjct: 504 IWDYELDLPLDKLFNELIDFWKIVFPNLNFSRVTVFNDLNEFLVQRIVSHLEEISLSKEL 563 Query: 556 IEAILRPE---NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 I+A+ + +L IVDL +N K + F+ K I ++ + K + + Sbjct: 564 IKAVCSSDELSQKRVLNIVDLKNRVNSIIKFNKKDNFVEIQKVITRVSKLANKSDISRDV 623 Query: 613 EISPQYL---LLE--AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 + Y+ L E E +++ I + E + Y ++ +L IE FD Sbjct: 624 LSTRDYVNTKLFEKDCEFKVFEFIGELEKLFSEG--YSNYLELLNLFEINVNTIEDLFDN 681 Query: 668 ---VLVNVDDREVRDNRLSLLQYIKNIIL 693 VL+ +D ++R+NRL+LL I+N L Sbjct: 682 EKGVLIMSEDLKIRNNRLNLLSLIRNYSL 710 >gi|257466465|ref|ZP_05630776.1| glycyl-tRNA synthetase beta chain [Fusobacterium gonidiaformans ATCC 25563] gi|315917622|ref|ZP_07913862.1| glycyl-tRNA synthetase subunit beta [Fusobacterium gonidiaformans ATCC 25563] gi|313691497|gb|EFS28332.1| glycyl-tRNA synthetase subunit beta [Fusobacterium gonidiaformans ATCC 25563] Length = 687 Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 196/729 (26%), Positives = 355/729 (48%), Gaps = 98/729 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE PAR A +L + K E + + ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEENPARFLEPALAELKKNFMNKCKAERIAHGEVKMYGTPRRLILCAEEVAEQQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-- 115 + E +GP G +A GF +S G+ + I+ D KG+ Y+A + Sbjct: 63 EDLNELNIGPTKSIAFLNGEITRAGIGFAKSQGIDPVDLEIIQTD--KGE-YIAARKSLQ 119 Query: 116 ---PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K L+ ++LK++V ++ +PKSM+WS + RP++ L + A Sbjct: 120 GQATKTLLPELLKSLVL----ELSFPKSMKWSDLK-----IRFARPIEWFLAM-----AD 165 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ +++ + N + GHRF V S++ Y + E V++D + R+ I D Sbjct: 166 SEVVEFEIEGMKSSNHSKGHRFFGKE-FTVNSVEDYFVKIRENNVIIDIQERKKMIREDI 224 Query: 233 -HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ++A ++V ++ LL E+ LVE+ +G+F+ +L +P+E++ ++++ +Q+ F Sbjct: 225 LSKIAE--DEQVVIEEGLLSEVTNLVEYPYPIVGTFNSDFLEVPQEVLIISMEVHQRYFP 282 Query: 292 TRTREGVLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWKRD-QNNLPNLSS 349 + G L F+++ N I+ SD + GN +V++ARL DA F+K D +N+L N Sbjct: 283 ILDKNGKLLPKFVVIRNGIEDSDN---VRIGNEKVLSARLADARFFYKEDLRNHLEN--- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 N++ K VVF +GT +++ R ++I +++ A + Sbjct: 337 --------NVEKLK------------HVVFQKDLGTIYQKIKRT----QEICEILLAKLH 372 Query: 410 L------VDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 L V R L+KADL + ++ +EF +LQG +G +YA+ E I EH P Sbjct: 373 LEEKRETVLRTAYLAKADLVSNMIGEKEFTKLQGFMGADYALKFGEKEEVSKGIREHYYP 432 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P I V +AD+LDTL+ + + PSGSKDP+ALRRA LGI+ IIL +K+ Sbjct: 433 RFQGDELPQVVEGILVGIADRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNIILNSKL 492 Query: 522 DIPLSQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 D+ L + + ++ ++ FF RL + + + D++ A+L Sbjct: 493 DLSLRELVNASLDTLAKDGVLKRDRAEVEKEVMEFFKQRL-INVFSEKMDRDIVAAVLEV 551 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 ++++ + ++ L F + + L AKR+ I +E K+RE+++ + Q E Sbjct: 552 QSEDAMDAFTRMQALKAFLTQEGAKDLLDLAKRVGNI--SKEAKSREVNVTLFQQ----E 605 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 EK LY I+ + K Y + + E + +F+ V V ++ E+++NR+ Sbjct: 606 EEKELYHYTEKTKMEIESLVSDKNYAGYLAAVLASKEIVTKYFNAVKVMDENVEIQNNRI 665 Query: 683 SLLQYIKNI 691 S L + ++ Sbjct: 666 SQLGLLSSL 674 >gi|330976411|gb|EGH76467.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 434 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 142/428 (33%), Positives = 212/428 (49%), Gaps = 48/428 (11%) Query: 139 KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 K MRW ++RP + ++ + ++++D + G + GHRFH P Sbjct: 3 KRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVDCTILAQSAGRHSRGHRFHHPQ 52 Query: 199 PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVE 258 +++ S Y+ DL A VL D RR I LA+ + LL+E+ GLVE Sbjct: 53 DVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELAAQQEGTAIVPPSLLDEVAGLVE 112 Query: 259 WVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAI 318 W + SF++++L +P+E + T++ NQK F G L FI V+NI++ D A I Sbjct: 113 WPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDGAGKLLPRFITVANIESKDP-AQI 171 Query: 319 VQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVV 378 + GN +VV RL DA F+K+D+ K+ FN L +VV Sbjct: 172 IAGNEKVVRPRLTDAEFFFKQDK---------KQKLETFNDRLK-------------NVV 209 Query: 379 FHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIG 438 F A++G+ ++ R+ L IA I D RA +LSK DL +E+V EFPE+QG G Sbjct: 210 FQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLLSKCDLSSEMVGEFPEMQGIAG 269 Query: 439 KEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSG 498 YA E A+ E PRG +PT V++ADKLDTL+ + I P+G Sbjct: 270 YYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAVAIADKLDTLVGIFGIGMLPTG 329 Query: 499 SKDPYALRRATLGIIRIILENKIDIPLSQFIE---------------DQNLILFFHDRLK 543 SKDPYALRRA LGI+RI++E K+D+ L + ++ + ++ F DRL+ Sbjct: 330 SKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFGAKIKPAGLAEQVLEFIFDRLR 389 Query: 544 LYLHDRDI 551 D + Sbjct: 390 ARYEDEGV 397 >gi|148269843|ref|YP_001244303.1| glycine--tRNA ligase [Thermotoga petrophila RKU-1] gi|166227930|sp|A5IKK4|SYGB_THEP1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|147735387|gb|ABQ46727.1| Glycine--tRNA ligase [Thermotoga petrophila RKU-1] Length = 672 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 189/725 (26%), Positives = 336/725 (46%), Gaps = 81/725 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H + L LLK + + + R + LK L Sbjct: 1 MRTALLEVGLEELPASEFHSILKQLEERSTELLKAYRISSGSAEVFVGSRRFGVILKNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA-- 111 + EE+ GP + G KA++GFLR+ + ++G +YL+ Sbjct: 61 ERQEDFTEEKKGPPLNVAYDENGKPTKALEGFLRNNNASLENVVH-----REGYIYLSRV 115 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V KP +E+VL + + + + K MRW + +IRP+ I+ ++ Sbjct: 116 VEGKP---VEEVLPDLFRDLVLGLNFRKPMRWGSGEH-----EYIRPVHWIVAMVDG--- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++DL++ + I+YG R+HA IK+ + Y L++ V+ R+ +L Sbjct: 165 --RVLDLEIFGLRSSRISYGKRYHA-GSIKIPDPERYYESLKKGFVISSHLERKKFVLEQ 221 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 G+++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 222 IDEFEKRSGMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFI 281 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L N F+ + +V+G RV+ ARLEDA +++++ Sbjct: 282 AHKE--TLTNTFVAFQD--GPQPPENVVKGYERVINARLEDARYYFQK------------ 325 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 DL PL++ +L ++VF K+GT ++V RI+ + +++ + L ++ Sbjct: 326 --------DLETPLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISERLCEDLKLPESFT 375 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H Sbjct: 376 QKVLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHYSEE------ 429 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + Sbjct: 430 PQTVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKNKADAIFRIIRKNEWDISLEEL 489 Query: 529 IE----------DQNLILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + + L FF R +L ++ I D+ A+ L I+ + L Sbjct: 490 LTFASSLVGYRLSEELETFFAGRFYQFLVNELGISFDVARAVNHLWKRPLRGILS-AEAL 548 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 E + + + +R+ I KN + S+ E EK+L + Sbjct: 549 QEISEKPEFQDLFVGFERVHNI-----TKNHD-SVRFDGALFEKEEEKKLMNKFYEVKEK 602 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + ++++ Y + L + I+ +FD V V V ++R NRL L+ I + ++V + Sbjct: 603 VLKALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLGFLKNIDELFMMVGD 662 Query: 698 VQKIV 702 + +V Sbjct: 663 MTYLV 667 >gi|288818943|ref|YP_003433291.1| glycine-tRNA ligase beta subunit [Hydrogenobacter thermophilus TK-6] gi|288788343|dbj|BAI70090.1| glycine-tRNA ligase beta subunit [Hydrogenobacter thermophilus TK-6] gi|308752529|gb|ADO46012.1| glycyl-tRNA synthetase, beta subunit [Hydrogenobacter thermophilus TK-6] Length = 657 Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 207/714 (28%), Positives = 330/714 (46%), Gaps = 96/714 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+PA++ + E L +L ++ + Y TP RL LY + Sbjct: 2 DLLIEIGTEELPAKVINHILEYLKESFGEVLGR-----KDAKLYGTPRRLALYYRDFENA 56 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV-YLAVLR 114 S + E +GP V G +A+ GFL+ + +I+K GD Y+A+ + Sbjct: 57 SILQEEVVVGPPVSVAYDSEGKPTRALLGFLQRVSASSEDVMRIRK----GDAEYIAIRK 112 Query: 115 -----KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 KP + + + I+ A P PK MRW S S++RP++ I + E Sbjct: 113 VYEGKKPLDALAERFEDILLSA----PLPKRMRWDK-----SGLSFLRPIRWICALYGGE 163 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 ++ L + T GHRF + I+++ Y L+E V+ D + R IL Sbjct: 164 -----VVPLSFGSVKASRKTKGHRFLSQGWIELKDASEYEEKLKENYVIPDFKERLGMIL 218 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + ++G + L +E+ LVE+ +G ++KYL LPE +I + +Q+ Sbjct: 219 AFLKEESYSLGGYPEYPEGLDQEVANLVEFPFAVVGELEEKYLELPERVIVTVLAHHQRF 278 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + +EG L FI +S D + IV G +V+ ARLEDAL F++ D Sbjct: 279 FCIK-KEGRLLPNFIGISGNLPKD--SLIVMGYQKVIRARLEDALFFYRED--------- 326 Query: 350 LKESALKFNLD-LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LID 405 LK L+ L L Q VVFH K G E+ R+ L ++I + L + Sbjct: 327 -----LKVKLEHLVDKLSQ---------VVFHPKAGNMLEKTQRLVYLSEEIGRHLMLNE 372 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +A + RA LSKADL T +V+EF ELQG +G YA LQ E+ AI EH P Sbjct: 373 ETIAKIKRASYLSKADLLTNMVKEFDELQGYMGYIYATLQGEDKDVSYAIYEHYLP---- 428 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +P + + +SLADK+D+++ F E PSGS DPY LRR GI I+ + DI L Sbjct: 429 --MPESTVGKVLSLADKIDSIVMFIKAGEIPSGSSDPYGLRRHAYGIFAIMEDALWDIDL 486 Query: 526 SQFIE------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLN 578 + IE + L F RL+ YL +D++ A+L + L+ + ++K + Sbjct: 487 RKLIEKFYGGTNPQLEAFLRGRLEAYLEVYG--YDVVRAVLEVHDPLKPLSCIKMVKRIA 544 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 K + + + +R+ +IL E + + + + + L+ + + Sbjct: 545 SLKEEQKFKDVVSAYRRVVRILPKEWEDSMVEEEVLKEKEEI-----NLWEKVKELNFKA 599 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 Q+ +D L + E ++ FFD VLV D ++ NRL+LL +K + Sbjct: 600 QDVLD----------LQPLKESVDAFFDAVLVMDKDERIKRNRLALLCNVKQLF 643 >gi|257458792|ref|ZP_05623915.1| glycyl-tRNA synthetase, beta subunit [Campylobacter gracilis RM3268] gi|257443780|gb|EEV18900.1| glycyl-tRNA synthetase, beta subunit [Campylobacter gracilis RM3268] Length = 675 Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 191/722 (26%), Positives = 341/722 (47%), Gaps = 73/722 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA K +++ +L E I + R ++P R L+ + Sbjct: 2 ELLIEIGVEELPAIPFLKERANIAPKWRAVL-EANRINSDFRFEFSPRRFVLFHEDFPQR 60 Query: 63 SPE-KIEERLGPRV-----GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +I P+ GA A F + G+ S+ + ++ K +Y A ++K Sbjct: 61 GDDAQIVSTGAPKSVALKDGAWSPAALSFAKKYGISE-SELEFRQVGGKEVLYHAEVQK- 118 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++ ++ + + ++MRW + F +IRP++SI C+L ++ + Sbjct: 119 GRDSREILGEMIEEFLRSLNFGRAMRWGSGE-----FEFIRPIRSIACVLGGQN-----V 168 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D ++ + + HR IK + Y LE V+L + R++ IL++ +L Sbjct: 169 DFEIYGVRSAAAFFPHRKFGYEAIKFKDAVDYFALLERNGVILSEQKRKDKILSEFAKLE 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G ++ D LL+E+ + E+ +GSF++ +L +P+E+I ++K NQ+ F + Sbjct: 229 KKHGFKIEVDPALLDEVTAITEYPTALLGSFERDFLSVPKEVIITSMKENQRYFPVFEGK 288 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L+N F++VSN +D +V+GN +V+ ARL DA+ FWK D Sbjct: 289 N-LSNHFVVVSN-AITDDDELVVRGNEKVLRARLSDAMFFWKSD---------------- 330 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL------ 410 + S ++++ + L V+ ++ ++ R L A I+A++ Sbjct: 331 LQAEFSPEKLKQISYMQALGSVYDKQV----RELAVARALSADYATQIEAEIGKKDFAQD 386 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V+ A++ SKADL + +V EF ELQG +G YA C AI E P G +P+ Sbjct: 387 VENAVMFSKADLSSTMVGEFSELQGIMGSYYAAHAGLADHVCRAIREQYLPSGEDSELPS 446 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI------- 523 S +++A K +TL+ ++IN+ PSG+KDPYALRRA G+I+I+L + Sbjct: 447 GVFSSVIAIAMKFETLLGLFSINKVPSGNKDPYALRRAATGLIKILLNQGLSFDANALAQ 506 Query: 524 ---PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 P + + L+ F DR LY +I +I+A + ++LL + IK L E Sbjct: 507 KLAPNYKKFDISKLLDFIKDR--LYGIFDEINPSVIKACIASGENDLLLLSKAIKALGEI 564 Query: 581 FSSAK-GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++A GE F + KR+ I+ K+ +I + AE+ L A + Sbjct: 565 AAAADFGENF-ATFKRLANII-----KDEKIG-AVDENLFEHGAERALNAAFRAIKLNEN 617 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + R L + I+ FFD V++NV D ++R NR++ + I L +++ Sbjct: 618 DVSGYLRS------LFGLKGVIDDFFDNVMINVQDVKIRTNRIANIGQIYRAFLQFADIK 671 Query: 700 KI 701 +I Sbjct: 672 EI 673 >gi|150020527|ref|YP_001305881.1| glycine--tRNA ligase [Thermosipho melanesiensis BI429] gi|149793048|gb|ABR30496.1| Glycine--tRNA ligase [Thermosipho melanesiensis BI429] Length = 661 Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 193/715 (26%), Positives = 334/715 (46%), Gaps = 91/715 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 ++ EI EE+P + L L KEE + Y + ++ P R ++K + Sbjct: 2 YIFEIGVEELPTTEVNNILLQLEEKLEKFFKEEELRYSGLTVFYAPRRFGFFIKKIDEKQ 61 Query: 64 PEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 +K E+ GP G KA++GFL+S +I D +I+ + V+L+ + Sbjct: 62 KDKTIEKRGPSKTVAFDENGNPTKALNGFLKSNN-ASIKDIEIRNNY----VFLSKKVEG 116 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K+ E++LK +P I + + KSM+W FS++R IL + E I+ Sbjct: 117 KK-TEELLKEKIPQIIYSLNFRKSMKWGN-----GEFSFVRIPHWILSVYKGE-----IL 165 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +++L I N TYGHRF + ++V+S++ Y+ +L V+ R+ +L+ Sbjct: 166 EIELFGIKASNKTYGHRFVDDNIVEVKSIEDYLENLRRLKVIALHGERKEKVLSLLKNYE 225 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++ D+ L++E++ L E+ + G F +KYL LPEELI TIK +Q+ F E Sbjct: 226 TSF------DEGLIDEVVTLTEYPILLEGRFLEKYLSLPEELITTTIKHHQRSFTVYKGE 279 Query: 297 GVLANCFILVSNIQASDGGAAIV-QGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + N F+ S I + +G ++ +G +VV ARLEDA +++++D +P L S ES Sbjct: 280 KI-TNKFL--SFIDSPNGNVDLIKKGYEKVVNARLEDAKYYYEKDL-KVP-LESFNES-- 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVD 412 + ++VF +GT ++V RI + +KI + + D + V Sbjct: 333 ------------------LKEIVFQKSLGTLMDKVERIEKISEKICEELKIDYSDKKRVL 374 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R L KAD+ + +V EFPELQG +G+ YA+ E+ + IEEH +VP N Sbjct: 375 RTAHLCKADIASSVVYEFPELQGVMGRIYALKDGEDYNVALGIEEH------YSDVPKNI 428 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 V++AD++DT++ + + PSGSKDP+ +R+ + I DI L + ++ Sbjct: 429 TGAIVAIADRVDTVVGNFIVGNIPSGSKDPFGIRKKVDTLFEIPNVFSWDIDLLEVVKFS 488 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAI----LRPENDNLLTIVDLIKHLN 578 L FF R +++ + + R+D+ A+ RP L+ + L Sbjct: 489 AELFGKGIPNELFEFFEARYEVF--NSNTRYDIARAVKRFWKRPLRGRLIA-----QALM 541 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 + + L+ +R+ I ++ S E L AEK L+ + I Sbjct: 542 NIVDKEEFQSLLIGFERVHNI------SSKFDSCEFDSTKFLDNAEKELFNKYIELKPRI 595 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 E++D+ + L + I+ +FD V V ++R NRL L+ + + L Sbjct: 596 LEALDNLSFDAALLYLVEFRKYIDSYFDNVFVMTKQDDIRMNRLGFLKSLDRLFL 650 >gi|116070688|ref|ZP_01467957.1| Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. BL107] gi|116066093|gb|EAU71850.1| Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. BL107] Length = 720 Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 200/747 (26%), Positives = 332/747 (44%), Gaps = 104/747 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA +A + L ++ L E + + ++ + TP RL + + L H Sbjct: 5 FLLEIGTEELPADFARQALDQLRDRVLHDLAEARLSHGSISIFGTPRRLVVSVPNLDDHQ 64 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P+ EER GP V G A GF + G+ S + + PK V+ VL + Sbjct: 65 PDLREERKGPPVAQAFKDGVPGPAAIGFAKRCGIDA-SQLEQRDTPKGPCVFATVLTAGR 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L+ ++P I + + MRW T S RP++ ++ + + +ID Sbjct: 124 DGVS-LLRDLIPTWIDALQGRRFMRWGTGTQRFS-----RPIRWLVAL-----HGDDVID 172 Query: 178 LDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ + + HR H P+ + S D Y++ L++A VL+D + R I Sbjct: 173 VEMPGADPVVQSDRFSRSHRLHGDQPLCIASADQYVKTLQQAGVLVDRDERSRLIRASID 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A A E L EE++ LVE ++ G +++L LP E+I ++ +Q+ + Sbjct: 233 QGAEAANGEANCPDRLFEELVDLVEGPRILQGQIAEQFLHLPPEVISTVMQAHQRYVPLQ 292 Query: 294 -----------TREGVLANCFILVSNI--QASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 T E VL F+LV+N QAS A I++GN RV+ ARL DA F + D Sbjct: 293 IPGLTPDPLRLTAEAVLRPEFLLVANGLEQAS---ALIIRGNERVLGARLADAEFFLEVD 349 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + S+ + AL V F IG+ +R RI L ++ Sbjct: 350 RRQA---SATRRDALS-------------------RVTFAEGIGSLRDRCDRIERLTDQL 387 Query: 401 AQ---LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 L D+ RA L K DL +++V EFPELQG +G +Y + + E+ A+ E Sbjct: 388 LTDLGLSDSVATASRRAAHLCKHDLVSQMVGEFPELQGLMGGKYLLEEGESRDVALAVVE 447 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H PRG +++P+ V+LA++ + L++ +A E+P+GS DPYALRRA G++ I+ Sbjct: 448 HYLPRGAGDDLPSTDAGAVVALAERFELLLSIYAKGERPTGSSDPYALRRAGNGVLLILW 507 Query: 518 ENKIDIPLSQFIEDQ--------------------NLILFFHDRLKLYLHDRDIRHDLIE 557 + L+ F+ +L R+ L D DL++ Sbjct: 508 NQGWKLDLNGFLAKAVEAWKELFPAFAVDTAQLVGDLSALLRQRITSQLEDDGYAADLVQ 567 Query: 558 AILRPENDNLLTIVDLIKHLN-----EFFSSAKGEKFLLSAKRIFQILA-IEEKKN---- 607 A+ D + T L L+ + + + L + + + Q + + EK + Sbjct: 568 AV---AGDTVSTTRLLWDPLDVRVRIQMLRGLRDQGRLTAVQAVVQRASRLAEKGDLPSG 624 Query: 608 -REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 S + P +E+ L+ D + Y Q+ D+L +E FFD Sbjct: 625 VLSSSDVVDPALFESASEQGLF----DATQRLNPLAASGAYQQLCDVLVESTPALEAFFD 680 Query: 667 ---QVLVNVDDREVRDNRLSLLQYIKN 690 V+V DD +R NRL+LL ++N Sbjct: 681 GDQSVMVMADDPALRTNRLNLLGVLRN 707 >gi|256826493|ref|YP_003150452.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Cryptobacterium curtum DSM 15641] gi|256582636|gb|ACU93770.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Cryptobacterium curtum DSM 15641] Length = 694 Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 202/722 (27%), Positives = 318/722 (44%), Gaps = 87/722 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M EI EEIPA A + L + + + + + + +P RL + GL Sbjct: 4 MHTLAFEIGVEEIPAFDLDSATKQLERLAPAAFEGARIPFDRIEVFSSPRRLIVMAYGLP 63 Query: 61 PHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E +E+ GP G KA GF R GL T D + ++ K + AV Sbjct: 64 EATEELMEKYKGPAARIAFDEAGQPTKAAIGFARGKGL-TPDDLE-RRLVKDVEYVFAVK 121 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + P + +L I+ I+ + WP+S RW+ ++RP++ I+ + + Sbjct: 122 QIPAVPVISLLPAILQGFIEDIKWPRSQRWAAYRE-----VFVRPVRWIVALF-----DD 171 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I L + G T+GHR AP +V I+ + A V+ R I +D Sbjct: 172 QVIPLQFAGVSTGRDTWGHRVLAPGAHRVNEATDLIKVVRAASVVPSQSEREQIIRDDVA 231 Query: 234 RLASAVGLELVED---KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + +LV D K LLE ++ L E+ Q +FD+ +L +P+E+I + +Q+ F Sbjct: 232 AIEHT--YDLVADLPAKTLLE-VVNLSEFPQPLAATFDESFLQVPQEIIIDAMLMHQRYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAA----IVQGNSRVVAARLEDALHFWKRDQNNLPN 346 ++G L N F++VSN G A I+ GN RVV ARL+DA F++ D Sbjct: 289 PLYDKKGALTNRFVIVSN-----GNPACQETIISGNERVVRARLDDAKFFYEED------ 337 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QL 403 L +PL+ + +L VVF +GT ++ R+ +A +L Sbjct: 338 --------------LKQPLESYVEKLS--SVVFQEDLGTVLDKTKRLVRQATHLAADAKL 381 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 AD ++RA L KADL T V EF +QG +G YA+ E AI +H +PR Sbjct: 382 SKADARDLERACYLCKADLVTNTVVEFTSVQGVMGGYYALASGETEQVAQAISQHYRPRF 441 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------- 516 + P + + V+ ADKLDT+ A+ + P+GS DP+ALRR+ +GII ++ Sbjct: 442 ASDTAPDSVVGQFVAFADKLDTVCGLIAVGQAPTGSSDPFALRRSAIGIIGMLDAGLPVS 501 Query: 517 LENKIDIPLSQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-ND 565 L ID L + D + + FF R K+ L D + D + A+L + Sbjct: 502 LLPAIDCALDALMADGISFNRTTAREAISDFFIARTKVILRDEGLPIDAVNAVLAAGVTE 561 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISL-EISPQYLLLEA 623 L SS + L + A N R+ SL + L Sbjct: 562 PALIAARTRALAAARASSPETMTDLAT--------AFARADNLRDASLGSKTDTSLFTPE 613 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L A I I + ++ Y + + L S+ PI+ FF+ V+V D+ +R+NRL Sbjct: 614 EADLQAAIDAVTAAIPDLLNQGDYVRALEKLASLRAPIDTFFEAVMVMDKDQTLRENRLR 673 Query: 684 LL 685 LL Sbjct: 674 LL 675 >gi|281412274|ref|YP_003346353.1| glycyl-tRNA synthetase, beta subunit [Thermotoga naphthophila RKU-10] gi|281373377|gb|ADA66939.1| glycyl-tRNA synthetase, beta subunit [Thermotoga naphthophila RKU-10] Length = 672 Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 188/725 (25%), Positives = 336/725 (46%), Gaps = 81/725 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H + L LLK + + + R + LK L Sbjct: 1 MRTALLEVGLEELPASEFHSILKQLEERSTELLKAYRISSGSAEVFVGSRRFGVILKNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA-- 111 + EE+ GP + G KA++GFLR+ + ++G +YL+ Sbjct: 61 ERQEDFTEEKKGPPLNVAYDENGKPTKALEGFLRNNNASLENVVH-----REGYIYLSRV 115 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V KP +E+VL + + + + K MRW + +IRP+ I+ ++ Sbjct: 116 VEGKP---VEEVLPDLFRDLVLGLNFRKPMRWGSGEH-----EYIRPVHWIVAMVDG--- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++DL++ + I+YG R+HA I++ + Y L++ V+ R+ +L Sbjct: 165 --RVLDLEIFGLRSSRISYGKRYHA-GSIEIPDPERYYESLKKGFVISSHLERKKFVLEQ 221 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 G+++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 222 IDEFEKRSGMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFI 281 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L N F+ + +V+G RV+ ARLEDA +++++ Sbjct: 282 AHKE--TLTNTFVAFQD--GPQPPENVVKGYERVINARLEDARYYFQK------------ 325 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 DL PL++ +L ++VF K+GT ++V RI+ + +++ + L ++ Sbjct: 326 --------DLETPLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISERLCEDLKLPESFT 375 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H Sbjct: 376 QKVLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHYSEE------ 429 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + Sbjct: 430 PQTVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKNKADAIFRIIRKNEWDISLEEL 489 Query: 529 IE----------DQNLILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + + L FF R +L ++ I D+ A+ L I+ + L Sbjct: 490 LTFASSLVGYRLSEELETFFAGRFYQFLVNELGISFDVARAVNHLWKRPLRGILS-AEAL 548 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 E + + + +R+ I KN + S+ E EK+L + Sbjct: 549 QEISEKPEFQDLFVGFERVHNI-----TKNHD-SVRFDGALFEKEEEKKLMNKFYEVKEK 602 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + ++++ Y + L + I+ +FD V V V ++R NRL L+ I + ++V + Sbjct: 603 VLKALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLGFLKNIDELFMMVGD 662 Query: 698 VQKIV 702 + +V Sbjct: 663 MTYLV 667 >gi|33591304|ref|NP_878948.1| glycyl-tRNA synthetase beta chain [Bordetella pertussis Tohama I] gi|33570946|emb|CAE40413.1| glycyl-tRNA synthetase beta chain [Bordetella pertussis Tohama I] gi|332380706|gb|AEE65553.1| glycyl-tRNA synthetase beta chain [Bordetella pertussis CS] Length = 712 Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 201/756 (26%), Positives = 343/756 (45%), Gaps = 109/756 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + K + + + L ++ + + TP RL + L + Sbjct: 8 LLIELFTEELPPKALQKLGQAFAEGVRATLARHHLLADGCAVEPFATPRRLAVRLSAVLA 67 Query: 62 HSPEKI-EERLGPRVGAGKKAIDGFLRSTGL----------QTISDCQIKKDPKKGDVYL 110 +PE+ E+L P K +D + T + + ++++ YL Sbjct: 68 QAPEQAYAEKLMPV----KVGLDANGQPTAALAKKLAAKGLEGLDPATLERESDGKQEYL 123 Query: 111 -AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A + L+ + AI +P PK MR+ + ++RP ++ + A+ Sbjct: 124 VARGTAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQTT-VKFVRPAHGLVALFGAD 182 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAI 228 I+ + + G T GHRF + I++ + Y DL E V+ E RR I Sbjct: 183 -----IVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAERGRVIASFEARRAEI 237 Query: 229 --LNDAHRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 L D H A +G L +D + LL+E+ LVE V++G F++++L +P+E + LT+ Sbjct: 238 SRLLDEH--AQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTM 295 Query: 284 KTNQKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + NQK F + G L + F++VSN+Q +D A IV+GN RVV RL DA F++ D+ Sbjct: 296 RLNQKYFPLFDPASGKLTHRFLIVSNMQVADP-ANIVEGNQRVVRPRLADAQFFFETDRK 354 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 PL R+ +L +V+H K+GTQ ERV R+R + + IA Sbjct: 355 T--------------------PLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGIAT 392 Query: 403 LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 + D A DRA +L+KADL + +V EFPELQG +G YA E A+ + R Sbjct: 393 ALGGDAAHCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNR 452 Query: 463 GPLENVPTNKISITVS---LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--- 516 + P + ++T + +A++++TL+ W+I P+G +DP+ LRRA LG+I Sbjct: 453 ---YDAPVDAATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQL 509 Query: 517 -----LENKIDIPLS---------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 L+ D PLS Q D + ++ ++++R R+ LI Sbjct: 510 AAGGWLKVSEDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYER-YRNQLIG---EH 565 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA----------KRIFQILAIEEKKNREISL 612 + + + ++ L L++ + + KRI +L +K EI Sbjct: 566 DRNAVEAVIALAPPLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLL---KKAEGEIG- 621 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC------EPIEIFFD 666 + L AEK L ++ + + Q GD S+ EP++ FF Sbjct: 622 AVDAALLQDPAEKALAEAVAQLRPQARAQL------QAGDFAASLATLAQAREPVDAFFA 675 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 V+V DD +R NRL+LL + ++ V ++ ++ Sbjct: 676 DVMVMADDAALRANRLALLGQLHGLMNQVADISRLA 711 >gi|27904629|ref|NP_777755.1| glycyl-tRNA synthetase beta chain (glycine--tRNA ligase beta chain) (GlyRS) [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29839497|sp|P59573|SYGB_BUCBP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|27904026|gb|AAO26860.1| glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) (GlyRS) [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 697 Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 203/729 (27%), Positives = 348/729 (47%), Gaps = 73/729 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + A+ + +I K + Y+ + + TP R+ + + ++ Sbjct: 5 FLIEIETEELPPKSLKAIAQSFNKQIIEKSKTYYLKYKQTKWFATPRRIAVMILDINTSD 64 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQT--ISDCQIK------KDPKKGDVYLAVLRK 115 + GP + K A D T + + IK + KG Sbjct: 65 TNFYLQTKGPSI---KNAFDKLGNPTSIMKFWMQKMNIKIHEITYLNTNKGSWVTCSKIT 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ I+++L + +AI+ + P M+WS S RP+++++ +L E + + Sbjct: 122 NKKSIQEILIELCRLAIKNISIPTFMKWSNNDIQFS-----RPVRNVIMLLNHEIIRNNV 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 + L+ + GH+F + I + Y L V+ D + R++ I A Sbjct: 177 LGLE-----TNRLLSGHKFMTNNKIILNHAYQYPELLLNSGKVIADYDARKHKIQKHASI 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTR 293 A +V L LLEEI LVEW + + +F K++L LP+E++ I+ Q+C + Sbjct: 232 AAQSVNGILKIKTTLLEEITALVEWPTILLATFKKRFLNLPQEILVHIIEKKQRCLPIYS 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 T G + N F++VSNI+ S IV+GN RV+ A+ DA + Sbjct: 292 TNNGTILNSFVVVSNIETSYPNN-IVRGNERVIHAQFVDA--------------EFFFKK 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 K L KPL ++ ++FH +GT ++ RI+ L I++ A+V R Sbjct: 337 DTKKKLIDYKPLLKK--------IIFHDTLGTLLDKTHRIKKLITWISKFTHANVNDCIR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAV--LQNENISCCDAIEEHLKPRGPLENVPTN 471 A LSK DL T + EFPE QG IG YA+ L+ +NI+ AI+E +P+ +N+P+N Sbjct: 389 AADLSKCDLVTNMTFEFPECQGIIGMYYALHDLEPKNIAI--AIKEQYQPKFSKDNLPSN 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGS-KDPYALRRATLGIIRIILENKIDIPLSQFIE 530 IS +++LADK+DTL ++IN+ + S KDP++LRR GI+RII++ I I L +E Sbjct: 447 TISYSLALADKIDTLTGLFSINKNYNISEKDPFSLRRLATGIMRIIIKKNIHINLYDLLE 506 Query: 531 ----------DQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD-LI 574 + ++IL F +R+ H +I++IL N +LT +D I Sbjct: 507 KSLKTYKKINNSDIILKKEIQFLFNRIYSIYDKNKYNHSIIKSILE-NNTKILTNIDPKI 565 Query: 575 KHLNEFFSSAKG--EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K + F + + +++ KR+ IL + K+N IS I+ + L E +L ++ Sbjct: 566 KAITYVFKNHPKILQNLIITQKRVSNILK-QFKEN--ISFNINMKTLEQIEEIKLIEQLN 622 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + L+S C+ I FF++V++N +++NRL++L I+N+ Sbjct: 623 IIEKKYKHPFSKETYISMMLTLNSFCQLIHEFFNKVMINHKIVSIKNNRLAILFKIQNLF 682 Query: 693 LIVINVQKI 701 + N I Sbjct: 683 FTISNFSNI 691 >gi|2654226|emb|CAA05843.1| aminoacyl-t-RNA synthetase [Arabidopsis thaliana] Length = 1067 Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 185/720 (25%), Positives = 346/720 (48%), Gaps = 67/720 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F++EI +EE+P + A+E L ++++ LL+ + + + ++ + TP RL + + +S Sbjct: 385 SFIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKAFGTPRRLVVLVDAMSSK 444 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E+ E GP G KA +GF R G+ + +K K + A + + Sbjct: 445 QLEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPL--EKLYRKVSGKTEYVHARVTE 502 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P RL +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + + Sbjct: 503 PARLALEVLSEDLPGILAKISFPKSMRWN------SSVIFSRPIRWVMAL-----HGDLV 551 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + I GN++ G R A + VQ+ + Y + + + ++ E R+ IL ++ L Sbjct: 552 VPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKSNAL 611 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +V LV ++LL E+ LVE +G F + +L LPEEL+ + ++ +QK F Sbjct: 612 AKSVNGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFSIIDE 671 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 672 SGQLLPYFIAVANGAINED--VVKKGNEAVLRARYEDAKFFYEVDTRK------------ 717 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI--AQLIDADV-ALVD 412 S+ DQ + ++FH K+GT ++++R++ + K+ A ID D+ +V+ Sbjct: 718 ----RFSEFRDQ------LQGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVE 767 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + +P Sbjct: 768 DAASLAMSDLATAVVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTD 827 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + +++ D+LD+L+ +A +PS + DP+ LRR + G+++I++E ++ + +E Sbjct: 828 AGMVLAIGDRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELA 887 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F RL+ L D + +++ ++L E N + + Sbjct: 888 ASVQPRKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVL-AERGNNPCLAARTAYKT 946 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 E S KGE F + + I K+ + +E+ E+ L++ + I Sbjct: 947 EKLS--KGEMFPKIVEAYSRPTRIVRGKDVGVGVEVDENAFETPQERTLWSTYTSIKDRI 1004 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ + + +I + EP+E FF+ V V V++ VR NRL+LL I N+ VI++ Sbjct: 1005 HTGIEIEEFTEIS---MQLVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDL 1061 >gi|33603064|ref|NP_890624.1| glycyl-tRNA synthetase beta chain [Bordetella bronchiseptica RB50] gi|33568695|emb|CAE34453.1| glycyl-tRNA synthetase beta chain [Bordetella bronchiseptica RB50] Length = 712 Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 201/756 (26%), Positives = 343/756 (45%), Gaps = 109/756 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + K + + + L ++ + + TP RL + L + Sbjct: 8 LLVELFTEELPPKALQKLGQAFAEGVRATLARHHLLADGCAVEPFATPRRLAVRLSAVLA 67 Query: 62 HSPEKI-EERLGPRVGAGKKAIDGFLRSTGL----------QTISDCQIKKDPKKGDVYL 110 +PE+ E+L P K +D + T + + ++++ YL Sbjct: 68 QAPEQAYAEKLMPV----KVGLDANGQPTAALAKKLAAKGLEGLDPATLERESDGKQEYL 123 Query: 111 -AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A + L+ + AI +P PK MR+ + ++RP ++ + A+ Sbjct: 124 VARGTAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQTT-VKFVRPAHGLVALFGAD 182 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAI 228 I+ + + G T GHRF + I++ + Y DL E V+ E RR I Sbjct: 183 -----IVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAERGRVIASFEARRAEI 237 Query: 229 --LNDAHRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 L D H A +G L +D + LL+E+ LVE V++G F++++L +P+E + LT+ Sbjct: 238 SRLLDEH--AQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTM 295 Query: 284 KTNQKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + NQK F + G L + F++VSN+Q +D A IV+GN RVV RL DA F++ D+ Sbjct: 296 RLNQKYFPLFDPASGKLTHRFLIVSNMQVADP-ANIVEGNQRVVRPRLADAQFFFETDRK 354 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 PL R+ +L +V+H K+GTQ ERV R+R + + IA Sbjct: 355 T--------------------PLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGIAT 392 Query: 403 LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 + D A DRA +L+KADL + +V EFPELQG +G YA E A+ + R Sbjct: 393 ALGGDAAHCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNR 452 Query: 463 GPLENVPTNKISITVS---LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--- 516 + P + ++T + +A++++TL+ W+I P+G +DP+ LRRA LG+I Sbjct: 453 ---YDAPVDAATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQL 509 Query: 517 -----LENKIDIPLS---------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 L+ D PLS Q D + ++ ++++R R+ LI Sbjct: 510 AAGGWLKVSEDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYER-YRNQLIG---EH 565 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA----------KRIFQILAIEEKKNREISL 612 + + + ++ L L++ + + KRI +L +K EI Sbjct: 566 DRNAVEAVIALAPPLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLL---KKAEGEIG- 621 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC------EPIEIFFD 666 + L AEK L ++ + + Q GD S+ EP++ FF Sbjct: 622 AVDAALLQDPAEKALAEAVAQLRPQARAQL------QAGDFAASLATLAQAREPVDAFFA 675 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 V+V DD +R NRL+LL + ++ V ++ ++ Sbjct: 676 DVMVMADDAALRANRLALLGQLHGLMNQVADISRLA 711 >gi|79436767|ref|NP_190394.3| EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase [Arabidopsis thaliana] gi|75154114|sp|Q8L785|SYGM2_ARATH RecName: Full=Glycyl-tRNA synthetase 2, chloroplastic/mitochondrial; AltName: Full=Glycine--tRNA ligase 2; Short=GlyRS 2; Flags: Precursor gi|22531150|gb|AAM97079.1| glycine--tRNA ligase precursor, chloroplast (edd1) [Arabidopsis thaliana] gi|45773748|gb|AAS76678.1| At3g48110 [Arabidopsis thaliana] gi|332644848|gb|AEE78369.1| glycyl-tRNA synthetase 2 [Arabidopsis thaliana] Length = 1067 Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 185/720 (25%), Positives = 346/720 (48%), Gaps = 67/720 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F++EI +EE+P + A+E L ++++ LL+ + + + ++ + TP RL + + +S Sbjct: 385 SFIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKAFGTPRRLVVLVDAMSSK 444 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E+ E GP G KA +GF R G+ + +K K + A + + Sbjct: 445 QLEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPL--EKLYRKVSGKTEYVHARVTE 502 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P RL +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + + Sbjct: 503 PARLALEVLSEDLPGILAKISFPKSMRWN------SSVMFSRPIRWVMAL-----HGDLV 551 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + I GN++ G R A + VQ+ + Y + + + ++ E R+ IL ++ L Sbjct: 552 VPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKSNAL 611 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +V LV ++LL E+ LVE +G F + +L LPEEL+ + ++ +QK F Sbjct: 612 AKSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFSIIDE 671 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 672 SGQLLPYFIAVANGAINED--VVKKGNEAVLRARYEDAKFFYEVDTRK------------ 717 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI--AQLIDADV-ALVD 412 S+ DQ + ++FH K+GT ++++R++ + K+ A ID D+ +V+ Sbjct: 718 ----RFSEFRDQ------LQGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVE 767 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + +P Sbjct: 768 DAASLAMSDLATAVVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTD 827 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + +++ D+LD+L+ +A +PS + DP+ LRR + G+++I++E ++ + +E Sbjct: 828 AGMVLAIGDRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELA 887 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F RL+ L D + +++ ++L E N + + Sbjct: 888 ASVQPTKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVL-AERGNNPCLAARTAYKT 946 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 E S KGE F + + I K+ + +E+ E+ L++ + I Sbjct: 947 EKLS--KGEMFPKIVEAYSRPTRIVRGKDVGVGVEVDENAFETPQERTLWSTYTSIKDRI 1004 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ + + +I + EP+E FF+ V V V++ VR NRL+LL I N+ VI++ Sbjct: 1005 HTGIEIEDFTEIS---MQLVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDL 1061 >gi|237751531|ref|ZP_04582011.1| glycyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229372897|gb|EEO23288.1| glycyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 692 Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 203/740 (27%), Positives = 345/740 (46%), Gaps = 115/740 (15%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ-------------YW 47 M + +EI++EE+PA I LLK I +N ++ ++ Sbjct: 1 MAELFIEIFTEELPA--------------IPLLKNLSNIKENWKKILKDSHLDAPFDFFY 46 Query: 48 TPHRLFLYLKGLSPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIK 100 TP RL K + P+ + GP + KA+ FL+ + Sbjct: 47 TPRRLSFIHKDFALKQPDTKTQSYGPPLAIAYDSSNNPTKAMQSFLQKNNITKDMVKTAI 106 Query: 101 KDPKKGDVYLAVLRKPKRLIE--DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRP 158 KD K+ Y K + IE ++L+++V + + + KSMRW S+IRP Sbjct: 107 KDNKEVLFY----EKEVKGIESSNLLESMVITLLHSLHFGKSMRWGDCKD-----SFIRP 157 Query: 159 LKSILCILVAEDAKEKIIDLDLKEIPCG-------NITYGHRFHAPHPIKVQ------SL 205 +++I CI+ LD K IPC N+ + HR A Q S+ Sbjct: 158 IRNI-CIM-----------LDHKNIPCNAYNIQGNNLIFAHR-QAKDTNGEQKSHYATSI 204 Query: 206 DHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMG 265 + Y+ L + V+LD + R++ IL + L + +++ D DLL+EI+ + E+ +G Sbjct: 205 ESYLDFLSQNGVILDQDKRKDLILQEIKELENKHNIKVEIDTDLLQEIVAITEYPHAMLG 264 Query: 266 SFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGG--AAIVQGNS 323 FD+K+L +P+E+I ++K NQ+ F ++ L + F++VSN S GG + I +GN Sbjct: 265 IFDEKFLKIPKEMIITSMKENQRYFAVY-KDSNLFHGFVVVSN---SFGGDFSLITKGNE 320 Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 +V+ ARLEDA+ F+ +D ++ SL + ++ + L ++AR Sbjct: 321 KVLRARLEDAMFFYTQDIDSKMEFGSLNSISF---MEGAGSLADKIAR------------ 365 Query: 384 GTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAV 443 Q S I +L K + + + ALV +A+ +K DL ++ V EFPELQG +G +A Sbjct: 366 -EQNMANSLIALLNTKHIECSENEKALVIQALKYAKCDLLSQSVGEFPELQGIMGSYFAK 424 Query: 444 LQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPY 503 C AI E P G +P++KIS V++A+KLDT+ + IN+ PSGSKDP+ Sbjct: 425 DCGMESEVCLAIREQYLPNGIQATLPSSKISALVNMANKLDTIFTLFNINKIPSGSKDPF 484 Query: 504 ALRRATLGIIRIILENKIDIPLSQFIE---------DQNLIL-FFHDRLKLYLHDRDIRH 553 ALRR I++I + D+ + + QN+++ F +R +Y + Sbjct: 485 ALRRQATAILKIAHQFGFDLSIKEICNLASKDYNNAKQNMLIDFMMER--IYGIFPGVNP 542 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 ++ +L + D I L +F S + + + KR+ IL ++I+L Sbjct: 543 SIVRCVLLM-GFGITQSFDKILALASYFESVDIKSVIGTFKRVANILD-NANLTKDITLN 600 Query: 614 ISPQYLLLEAEKRLY----AVISDFGTHI-QESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 S L E+E +LY A T I ++D + Y + L ++ ++ FD V Sbjct: 601 TS---LFEESETKLYNNLMAYTKSKKTEITNNTLDSESYLAQIESLFALKSDLDSVFDNV 657 Query: 669 LVNVDDREVRDNRLSLLQYI 688 L+ D+ E++ NR+ L+ + Sbjct: 658 LIMTDNVELKQNRIGLITLV 677 >gi|33865630|ref|NP_897189.1| putative glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8102] gi|33632800|emb|CAE07611.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8102] Length = 720 Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 207/748 (27%), Positives = 349/748 (46%), Gaps = 106/748 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA +A + L + L + + +++++ TP RL + + GL+ Sbjct: 5 FLLEIGTEELPADFARQALDQLQDRVGRDLLDSRLDHKSVQVLGTPRRLVVRVHGLADRQ 64 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P+ E++ GP + G A GF + G+ S +++ PK G+ A +R Sbjct: 65 PDLEEDQKGPPIAQAFKDGVPGPAAIGFSKRCGVDP-SQLEVRNTPK-GECVFASVRTEG 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + D+L+ ++P I + + MRW T S RP++ +L + K +D Sbjct: 123 QNSVDLLQELIPAWINGLQGRRFMRWGTGSQRFS-----RPIRWLLAL--------KGVD 169 Query: 178 LDLKEIPCGN-------ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 L EIP + + GHR H P+ + + + Y L A V++D + R A L Sbjct: 170 LIPVEIPGADPPVRSDRFSRGHRLHGDQPLPIDTAEDYDDTLAAAGVIVDRQQR--AALI 227 Query: 231 DAHRLASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + ASA L + D + L EE++ LVE ++ GS +++L LP E+I ++ +Q+ Sbjct: 228 RSQLDASADQLNGLPDCPESLFEELVDLVESPRLLQGSIAERFLSLPPEVIITVMQAHQR 287 Query: 289 CFVTRTREG-----------VLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHF 336 + E VL F+LV N ++A+D A I +GN RV+AARL DA F Sbjct: 288 YVPLKVPEVTPDPLQLEATVVLQRDFLLVGNGLEAAD--ALITRGNERVLAARLADAEFF 345 Query: 337 WKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL 396 ++D +P R LD V F +G+ +R RI Sbjct: 346 --------------------LSVDRRQPSSARREALDR--VTFAEGLGSLLDRCQRIERT 383 Query: 397 GKKIAQLIDADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD 453 +++ ++ D + RA K DL +++V EFPELQG +G +Y + + E Sbjct: 384 ARQLVDQLNLDAHQGEAAIRAAHFCKHDLVSQMVGEFPELQGLMGGKYLLEEGEPTEVAL 443 Query: 454 AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 A+ EH PRG + +P++ V+LA++L+ L++ +A E+PSGS DPYALRRA G++ Sbjct: 444 AVVEHYLPRGAGDQLPSSDAGAVVALAERLELLLSIFAKGERPSGSSDPYALRRAGNGLL 503 Query: 514 RIILENKIDIPLSQF----IED----------------QNLILFFHDRLKLYLHDRDIRH 553 +I+ + + LS+F +ED Q+L R+ L D Sbjct: 504 QIVWDRGWRLDLSRFLGSAVEDWAALFPEFAIDSSALHQDLCQLLRQRIVSQLEDEGFVP 563 Query: 554 DLIEAILRPE--NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEK----- 605 DL++A+ + LL ++ + ++ + K L + Q A + EK Sbjct: 564 DLVQAVSAESVATERLLADPMDVRERLDLLNALRQSKALPGLMAVVQRAARLAEKGDLVE 623 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + +S +SP+ +E +Y V+ ++ +RY ++ + L +E FF Sbjct: 624 TDLTVSAVVSPERFESPSETAMYEVL----VQLEPLASGRRYRELAEALVQATPVLEAFF 679 Query: 666 ---DQVLVNVDDREVRDNRLSLLQYIKN 690 D V+V DD E+R NRL+LL ++N Sbjct: 680 DGDDSVMVMADDPELRRNRLNLLGVLRN 707 >gi|4678317|emb|CAB41128.1| aminoacyl-t-RNA synthetase [Arabidopsis thaliana] Length = 1067 Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 185/720 (25%), Positives = 346/720 (48%), Gaps = 67/720 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F++EI +EE+P + A+E L ++++ LL+ + + + ++ + TP RL + + +S Sbjct: 385 SFIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKAFGTPRRLVVLVDAMSSK 444 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E+ E GP G KA +GF R G+ + +K K + A + + Sbjct: 445 QLEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPL--EKLYRKVSGKTEYVHARVTE 502 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P RL +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + + Sbjct: 503 PARLALEVLSEDLPGILAKISFPKSMRWN------SSVMFSRPIRWVMAL-----HGDLV 551 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + I GN++ G R A + VQ+ + Y + + + ++ E R+ IL ++ L Sbjct: 552 VPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKSNAL 611 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +V LV ++LL E+ LVE +G F + +L LPEEL+ + ++ +QK F Sbjct: 612 AKSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFSIIDE 671 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 672 SGQLLPYFIAVANGAINED--VVKKGNEAVLRARYEDAKFFYEVDTRK------------ 717 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI--AQLIDADV-ALVD 412 S+ DQ + ++FH K+GT ++++R++ + K+ A ID D+ +V+ Sbjct: 718 ----RFSEFRDQ------LQGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVE 767 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + +P Sbjct: 768 DAASLAMSDLATAVVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTD 827 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + +++ D+LD+L+ +A +PS + DP+ LRR + G+++I++E ++ + +E Sbjct: 828 AGMVLAIGDRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELA 887 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F RL+ L D + +++ ++L E N + + Sbjct: 888 ASVQPTKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVL-AERGNNPCLAARTAYKT 946 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 E S KGE F + + I K+ + +E+ E+ L++ + I Sbjct: 947 EKLS--KGEMFPKIVEAYSRPTRIVRGKDVGVGVEVLENAFETPQERTLWSTYTSIKDRI 1004 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ + + +I + EP+E FF+ V V V++ VR NRL+LL I N+ VI++ Sbjct: 1005 HTGIEIEDFTEIS---MQLVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDL 1061 >gi|168058267|ref|XP_001781131.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667449|gb|EDQ54079.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1124 Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 191/721 (26%), Positives = 337/721 (46%), Gaps = 82/721 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI SEE+P + A L ++ LLKE+ + + ++ TP RL + ++ L+ Sbjct: 440 FVLEIGSEELPPQDVSSAISQLKGVVPSLLKEKRLQHGSISVQGTPRRLVVMVEELATQQ 499 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +E GP G KA +GF + G++ + K D K V+ A++++ Sbjct: 500 DDNEKEVRGPPAAKAFDAEGNVTKAAEGFCKKNGVRK-EELYTKTDGKTEYVF-AIVKQQ 557 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K+ VL +PV + + +PK+MRW+ S S+ RPL+ +L + + I+ Sbjct: 558 KKSSVQVLAEEIPVLLANLSFPKTMRWN------SQASYSRPLRWLLAL-----HGDTIV 606 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + G R I+V + Y+ +EA +++ + R ++I + LA Sbjct: 607 PFTYANVRSGRSCRVLRNSFQPTIQVAKAEDYVEATKEAGLVISMKERMDSIWAQSSELA 666 Query: 237 SAVGLELVEDK---DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++V L+ D+ LLEE+ LVE +GSF++ +L LP +++ ++ +Q+ F Sbjct: 667 ASVN-GLIPDEFKGGLLEEVANLVESPNPLLGSFNESFLKLPSDVLTTVMRKHQRYFPVV 725 Query: 294 TR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L FI V+N Q A + +GN V+ AR EDA F Sbjct: 726 DRLNGQLLPAFITVANGQIDQ--AVVRKGNEAVLRARYEDARFF---------------- 767 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVA 409 + D SKPL R + + F K+G+ ++ R+ + A L +A +A Sbjct: 768 ----YEADTSKPLADY--RPLLQGITFQEKLGSMLDKSKRVEAMVDAFASALGLDEASLA 821 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + +A L+ ADL T +V+EF L G +G+ YA+ + + DAI EH PR +++ Sbjct: 822 IARQAAPLATADLATAMVKEFTSLSGIMGRHYALREGQPPQVADAIFEHALPRSAGDSLA 881 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ D+LD+L+ +A+ +P+ + DP+ LRR+ G+++ ++ N + LSQ + Sbjct: 882 KTDAGVLLAVVDRLDSLVGLFAVGCQPTAAADPFGLRRSAYGLVQTLVANGKVLDLSQAL 941 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN---DNLLTIVDLIKHLNEFFSSAKG 586 F D L + D+ I LI R E D +V++ L+E +G Sbjct: 942 R------FAADVQPLPVPDKVIDEVLIFIARRLEQLLVDGGANVVNVRSVLSE-----RG 990 Query: 587 EKFLLSAKRIFQI--LAIEEKKNREISLEISPQYLLLEAE-KRLYAVISDFGTHIQESMD 643 L+A+ + Q+ LA E +R ++ P ++ + + V D +E Sbjct: 991 TVPTLAARSVSQLETLATGEALDRVVAAYARPTRIVRGKDVDPSWKVNEDLFAVPEEIAL 1050 Query: 644 HKRYHQIGDLLHS-------------ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 Y Q LH+ + EP+E FF V V ++ ++R+NRL+LL + N Sbjct: 1051 WDAYKQTASKLHTGVDVNVFVEASQALVEPLEAFFKNVFVMAEEEDLRNNRLALLSSVAN 1110 Query: 691 I 691 + Sbjct: 1111 L 1111 >gi|170288528|ref|YP_001738766.1| glycyl-tRNA synthetase, beta subunit [Thermotoga sp. RQ2] gi|238688825|sp|B1L9T5|SYGB_THESQ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170176031|gb|ACB09083.1| glycyl-tRNA synthetase, beta subunit [Thermotoga sp. RQ2] Length = 672 Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 193/729 (26%), Positives = 335/729 (45%), Gaps = 89/729 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H L LLK + ++ + R + L L Sbjct: 1 MRTALLEVGLEELPASEFHSILRQLEEKSAELLKAYRISSGSVEVFVGSRRFGVILNNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA-- 111 + EE+ GP + G +A++GFLR+ + ++G VYL+ Sbjct: 61 ERQEDFTEEKKGPPLNIAYDENGKPTRALEGFLRNNNASLENVVH-----REGYVYLSRV 115 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V KP +E+VL + + + + K MRW + ++RP+ I+ ++ Sbjct: 116 VEGKP---VEEVLPDLFRDLVLGLNFRKPMRWGSGEH-----EYVRPVHWIVAMVDG--- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++DL++ + I+YG R+HA I++ + Y L++ V+ R+ +L Sbjct: 165 --RVLDLEIFGLRSSRISYGKRYHAG-SIEIPDPERYYESLKKGFVISSHLERKKFVLEQ 221 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 G+++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 222 IDEFEKRSGMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFI 281 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L N F+ + +V+G RV+ ARLEDA +++++D L+ Sbjct: 282 AHKE--TLTNIFVAFQD--GPQPPENVVKGYERVINARLEDARYYFQKD---------LE 328 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 S K N L ++VF K+GT ++V RI KKI+Q + D+ L Sbjct: 329 TSLEKMNEKLK-------------EIVFQEKLGTLYDKVERI----KKISQRLCEDLKLP 371 Query: 411 ------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 V A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H Sbjct: 372 EMFTQKVLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHYSEE-- 429 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 P I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI Sbjct: 430 ----PQTVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKSKADTIFRIIRKNEWDIS 485 Query: 525 LSQFIE----------DQNLILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDL 573 L + + + L FF R +L ++ I D+ A+ L I+ Sbjct: 486 LEELLTFASSLVKYHLSEELETFFAGRFYQFLINELGISFDVARAVNHLWKKPLRGILS- 544 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L E + + + +R+ I KN + S + E EK+L + Sbjct: 545 AEALQEISEKPEFQDLFVGFERVHNI-----TKNHD-STKFDGALFEKEEEKKLMNKFYE 598 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + ++++ Y + L + I+ +FD V V V ++R NRLS L+ I + + Sbjct: 599 VKEKVLKALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLSFLKNIDELFM 658 Query: 694 IVINVQKIV 702 +V ++ +V Sbjct: 659 MVGDMTYLV 667 >gi|251771355|gb|EES51936.1| Glycyl-tRNA synthetase, beta subunit [Leptospirillum ferrodiazotrophum] Length = 734 Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 200/753 (26%), Positives = 341/753 (45%), Gaps = 100/753 (13%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLE+ EE+PA + L+ ++ L+E+G + + P RL + + GL P + Sbjct: 17 LLEVGCEELPAGSVSDVLDSLARLVRAGLEEKGASFSGIFSGGIPSRLVVRIDGLLPETS 76 Query: 65 EKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-P 116 + E GP V A A+ GF R+ T D ++ + P+ YL++ ++ P Sbjct: 77 AREELVTGPPVSAAGGWPSDPSPAVRGFARAQN-ATPEDLEVVETPRG--RYLSLRKRLP 133 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L I A+ + + KSMRW + P ++RPL IL + +++++ Sbjct: 134 SLPVFEILPGIFQGALSSLTFAKSMRWGRGNGP-----FLRPLLWILALY-----RDEVV 183 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND---AH 233 + G +T R+ P+ V+++ HY ++ + V L RR+ I ND A Sbjct: 184 GFEFAGQVSGRLTAPPRYRGSSPVLVRNVVHYDSEVRDWGVELSLARRRDRIENDLILAM 243 Query: 234 RLASAVG-----LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 R+ + G L L D LL+E+ LVE +V + +++ +P ++R +K +Q+ Sbjct: 244 RMEESAGTWPDDLTLSLDPQLLDEVTCLVENYRVIPATLPERFSGIPAPVVRTVLKVHQR 303 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 FV + G F+ VS ++ + + G RVVAARLEDA ++ RD Sbjct: 304 FFVADSGAGRPVAHFLGVSGNPTAEL-SVVRDGYVRVVAARLEDAAYYISRD-------- 354 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR-VLGKKIAQLIDAD 407 ++ PL R+ LD VVF +G+ G++V R +L + +A L D Sbjct: 355 ------------VAVPLSDRVPGLD--SVVFFPGVGSVGDKVRATRRLLFEVLALLPDGL 400 Query: 408 VA-----------LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE--------N 448 +A + +RA +L KADL T +V+EFPEL+G++G+ Y + + E + Sbjct: 401 IARHHTTREDLAAICERAAILYKADLLTGLVKEFPELEGEVGRYYFLREVEKGGEITPLD 460 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRA 508 + +AI H PR + VP + S+ +SL D+ + PSGS DP+ALRR+ Sbjct: 461 RAVAEAIASHYAPRTFRDPVPEDLPSLLLSLCDRAVGQAGAFLGGANPSGSLDPFALRRS 520 Query: 509 TLGIIRIILENKIDIPLSQFIE------------------DQNLILFFHDRLKLYLHDRD 550 LG++RI+ E + + LS+ + L+ F+ DR++ L RD Sbjct: 521 GLGLVRILAEGALPLTLSKLADLALEAWGLSSPPKPLSETSPALVAFWEDRME-SLFTRD 579 Query: 551 IRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI 610 A + L+ L + L+EF SA F R+ +IL+ E Sbjct: 580 GASAWYGAARLSDEPPFLSWRRL-EFLSEFLLSADFGAFETVKTRVDRILSGENSS---- 634 Query: 611 SLEISPQYLLLEAEKRLYAVISDF-GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 P + + E+ L+ ++ T + + L + IE FF VL Sbjct: 635 ---FDPALIAVSEERALWESLAALEKTPFPHDPTREDFFTEVLRLKPLLPVIEAFFSAVL 691 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 VN D VR NR +LL + + + ++ ++V Sbjct: 692 VNDPDPGVRRNRQALLAILSGRLSVFGHLDRLV 724 >gi|72382003|ref|YP_291358.1| glycyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. NATL2A] gi|72001853|gb|AAZ57655.1| glycyl-tRNA synthetase beta chain [Prochlorococcus marinus str. NATL2A] Length = 720 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 173/603 (28%), Positives = 284/603 (47%), Gaps = 80/603 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA + L + + L + + + TP R+ L ++G++ Sbjct: 1 MSTYLLEIGTEELPADLAESVISQLELSVNNDLNSAQIKFSEISVTTTPRRIALTIEGIA 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P S + I ER GP V G KA GF + L +I++ K V+ + Sbjct: 61 PFSEDNIAERKGPPVSQAFHDGKPTKAAIGFAKRYELSP-EKLEIRETSKGSFVFAKSIE 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K K + VL +P I K+ + MRW F + RP++ I+ +L +E K Sbjct: 120 KGKP-VTTVLSDYLPRWISKIQGRRFMRWGKGD-----FRFSRPIRWIVSLLDSEVLPFK 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND--- 231 I D EI GNI+ HR + +++ Y L++ V +D + RR + +ND Sbjct: 174 ISGCD-PEIQIGNISRPHRLYGTK-LEINDAKTYFDQLQDVGVTVDRD-RRLSCINDLVL 230 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF- 290 H + V +L + LL E+ L+E + G FD+ +L LP E++ +K +Q+ Sbjct: 231 NHEIDKKVKPDLTDP--LLNELTDLIESPLLVTGCFDESFLELPPEVLSTVMKVHQRYIP 288 Query: 291 ----------VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 ++ + L F+ +SN S I++GN +V+ AR DA F K D Sbjct: 289 LYKVNVEFDPLSLNSKNTLLPTFLCISNGLPS-AKEKIIKGNEKVLKARFADASFFIKSD 347 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKK 399 L +R+D L DV F +G+ ERV+RI L K Sbjct: 348 L-----------------------LISSSSRIDKLKDVTFAEGLGSLYERVNRIEWLVKL 384 Query: 400 IAQLIDADVALVDRAIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + ++ D + +++ SK DL + +V EFPELQG IG +Y + + E+ C + Sbjct: 385 LTLKLEFDQEDIQKSVKVAHFSKHDLVSNMVDEFPELQGIIGSKYLLHEGESRDVCLGVL 444 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH KP+G +++P+N + VSLA++ + LI+ +A E+PSGS DPYALRRA GI+ I+ Sbjct: 445 EHYKPKGTSDSLPSNNLGNAVSLAERFELLISIYAKGERPSGSSDPYALRRAANGILLIL 504 Query: 517 LENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLI 556 + +++ ++D +L FF R+ L ++D+ D+I Sbjct: 505 WNKDWQLNINKILDDSLIYWQQLFPSLSLDISNLLSDLKEFFRQRIISLLEEKDVEFDII 564 Query: 557 EAI 559 +A+ Sbjct: 565 QAV 567 >gi|86609951|ref|YP_478713.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558493|gb|ABD03450.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. JA-2-3B'a(2-13)] Length = 730 Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 199/756 (26%), Positives = 333/756 (44%), Gaps = 91/756 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLE+ EE+PA A E + L E + + M+ + TP RL + L+GL Sbjct: 1 MVAYLLEVGCEELPASFVDSALEQWRTGIPASLAEAHLQAEQMQLFGTPRRLAVLLQGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP V G A + F + G+ S +I++ KG AV R Sbjct: 61 TQQPDRTLEVKGPPVQVAYQDGQLTPAGEKFAQKQGVDPGS-LEIRQV-GKGSFVFAVQR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R VL+ + P I + + MRW+ + RP++ ++ + ++ Sbjct: 119 VRGRPTAAVLQELAPAWITNLSGERLMRWACGD-----LKFPRPIRWLVSLW-----DDQ 168 Query: 175 IIDL--------DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++ L + + G ++ GHR + ++ + Y++ ++EA V DP R Sbjct: 169 VLPLLLPTHEGNTMPGLVAGRVSRGHRVLGSQQVTLERAESYVQQMQEAGVSPDPAVREA 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I + +LA V E LL E++ LVEW +G F+ ++L LP +I + + Sbjct: 229 YIQAEVTKLARQVNGEAQIPAPLLREVVQLVEWPTAVLGRFEPEFLRLPPAVIETVMIIH 288 Query: 287 QKCFVTRTREGV--LANCFILVSNIQASDGGAA--IVQGNSRVVAARLEDALHFWKRDQN 342 Q+ F R L FI +SN D G + I GNSRVV ARL DA F++ D+ Sbjct: 289 QRYFPVRDGRDPQKLLPYFITISN---GDPGQSERIGAGNSRVVRARLSDARFFYEEDRR 345 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 PL QR+ RL V F +G+ ++V RIR + + IA Sbjct: 346 --------------------IPLAQRVERLQA--VTFAEGLGSMRDKVERIRHISRLIAA 383 Query: 403 LIDADV---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ D ALV+R L KADL T++V EFPELQG +G +YA E + + IE+H Sbjct: 384 ALNLDAQEQALVERTAYLCKADLVTQMVYEFPELQGIMGADYARQDGEPEAVAEGIEQHY 443 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P G + +PT V AD+LDTL+ + + P+GS D +ALRRA ++ + + Sbjct: 444 WPLGAGDALPTALTGRVVGWADRLDTLVGMFRLGRIPTGSSDRFALRRAANSLVLVAWDA 503 Query: 520 K----IDIPLSQFIED---------QNLILFFHDRLKLYLH-DRDIRHDLIEAILR-PEN 564 ++ L ++D + L F R++ L ++ I +DL+ A++ PE+ Sbjct: 504 GWTFDFNLLLQSVVQDYAFGDVHTLRALQEFLAQRIQTLLQEEKRIDYDLVRAVVGDPES 563 Query: 565 ----------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR 608 NL + ++L ++ + + R ++ A + Sbjct: 564 VKTEDPQKAELTMRALGNLPLTLLRAEYLQHLRATGELADLYPTLNRCARLAAQGDLDYA 623 Query: 609 EI--SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + + + P L AE+ LY E + + + L + + FF+ Sbjct: 624 VVDPAAAVDPDQLQEAAERELYEACQKVYRLGVEPALQGDFVPLVEALQAAAPQVAQFFE 683 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 VLV D R +RL+LL ++N ++ ++ +V Sbjct: 684 AVLVMDPDPGRRASRLNLLGVLRNQSRLLGDMGAVV 719 >gi|33598170|ref|NP_885813.1| glycyl-tRNA synthetase beta chain [Bordetella parapertussis 12822] gi|33566728|emb|CAE38939.1| glycyl-tRNA synthetase beta chain [Bordetella parapertussis] Length = 712 Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 199/756 (26%), Positives = 342/756 (45%), Gaps = 109/756 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + K + + + L ++ + + TP RL + L + Sbjct: 8 LLVELFTEELPPKALQKLGQAFAEGVRATLARHHLLADGCAVEPFATPRRLAVRLSAVLA 67 Query: 62 HSPEKI-EERLGPRVGAGKKAIDGFLRSTGL----------QTISDCQIKKDPKKGDVYL 110 +PE+ E+L P K +D + T + + ++++ YL Sbjct: 68 QAPEQAYAEKLMPV----KVGLDANGQPTAALAKKLAAKGLEGLDPATLERESDGKQEYL 123 Query: 111 -AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A + L+ + AI +P PK MR+ + ++RP ++ + A+ Sbjct: 124 VARGTAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQTT-VKFVRPAHGLVALFGAD 182 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAI 228 I+ + + G T GHRF + I++ + Y DL E V+ E RR I Sbjct: 183 -----IVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAERGRVIASFEARRAEI 237 Query: 229 --LNDAHRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 L D H A +G L +D + LL+E+ LVE V++G F++++L +P+E + LT+ Sbjct: 238 SRLLDEH--AQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTM 295 Query: 284 KTNQKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + NQK F + G L + F++VSN+Q +D A IV+GN RVV RL DA F++ D+ Sbjct: 296 RLNQKYFPLFDPASGKLTHRFLIVSNMQVADP-ANIVEGNQRVVRPRLADAQFFFETDRK 354 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 PL R+ +L +V+H K+ TQ ERV R+R + + IA Sbjct: 355 T--------------------PLAARVEQLG--SIVYHNKLSTQLERVERVRAIARGIAT 392 Query: 403 LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 + D A DRA +L+KADL + +V EFPELQG +G YA E A+ + R Sbjct: 393 ALGGDAAHCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNR 452 Query: 463 GPLENVPTNKISITVS---LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--- 516 + P + ++T + +A++++TL+ W+I P+G +DP+ LRRA LG+I Sbjct: 453 ---YDAPVDAATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQL 509 Query: 517 -----LENKIDIPLS---------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 L+ D PLS Q D + ++ ++++R R+ LI Sbjct: 510 AAGGWLKVSEDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYER-YRNQLIG---EH 565 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA----------KRIFQILAIEEKKNREISL 612 + + + ++ L L++ + + KRI +L +K EI Sbjct: 566 DRNAVEAVIALAPPLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLL---KKAEGEIG- 621 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC------EPIEIFFD 666 + + AEK L ++ + + Q GD S+ EP++ FF Sbjct: 622 AVDAALVQDPAEKALAEAVAQLRPQARAQL------QAGDFAASLATLAQAREPVDAFFA 675 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 V+V DD +R NRL+LL + ++ V ++ ++ Sbjct: 676 DVMVMADDAALRANRLALLGQLHGLMNQVADISRLA 711 >gi|152993287|ref|YP_001359008.1| glycyl-tRNA synthetase subunit beta [Sulfurovum sp. NBC37-1] gi|151425148|dbj|BAF72651.1| glycyl-tRNA synthetase, beta subunit [Sulfurovum sp. NBC37-1] Length = 682 Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 191/670 (28%), Positives = 322/670 (48%), Gaps = 51/670 (7%) Query: 47 WTPHRLFLYLKGLSPHSPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIK 100 +TP RL L + ++ E +GP + A KA +GF R G+ + Sbjct: 47 YTPRRLVLKHAAMPEKQEDQTIELMGPPIAAAIKDGVPTKAAEGFARKCGVPFEELGRAD 106 Query: 101 KDPKKGDVYLAVLRKPKRLIED--VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRP 158 + ++ Y +K +R + +L+ ++ I + + K MRW + +IRP Sbjct: 107 NNGREVLYY----KKEERGAQTAALLQEMLEKWIASMSFGKMMRWGSRSD-----EFIRP 157 Query: 159 LKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVL 218 ++ + + E I ++L + TY HR ++V ++D Y L+E VL Sbjct: 158 IRWLQVRMGDES-----IPVELFGVQSDTKTYVHRMVNYDALEVPNIDAYEAILKEGAVL 212 Query: 219 LDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 L P+ R IL + L + G+ + D+ LL E++ + E + +GSFD+ +L LP E+ Sbjct: 213 LYPKEREAVILAEFDALEAEHGILIERDRALLAEVVAITENPKALVGSFDELFLELPPEV 272 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 I ++K +Q+ F G + N F++VSN +D + ++ GN RV+ RL D L F+K Sbjct: 273 IITSMKEHQRYFPV-FENGKITNKFVVVSNAY-TDDYSKVIAGNERVLKPRLADGLFFYK 330 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 D N LS+ ++F +D L ++ R + V A + E + GK Sbjct: 331 NDLRN--GLSTDGLEKVQF-IDGLGSLADKIKREKSIAVRLLALYMDRLEAGT-----GK 382 Query: 399 KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 A+L L+DRA+ L+KADL +E+V EF ELQG +G YA E+ +AI+E Sbjct: 383 NSAEL----ERLMDRAVELAKADLMSEMVYEFTELQGLMGYYYAKALGEDPLVYNAIKEQ 438 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 P G +PT+ S V+++ KLDTL +++ + P+GSKDP+ALRRA GI+RI+ + Sbjct: 439 YMPVGEGAELPTSLFSSIVAMSIKLDTLFGLFSVGKIPTGSKDPFALRRAVNGIVRIVTD 498 Query: 519 NKIDIPLSQFIE--DQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIV 571 N I + IE F D LK ++ +R D +I A+L ++ I Sbjct: 499 NDITFNIDDIIELLKAEYAEFNTDELKDFIIERINKSLDANPSVIAAVLASGERDINEIA 558 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + LNE S+ ++ + KR+ I + + + ++S++IS EAE LY Sbjct: 559 KKVAALNEIVSADTFKEQFSTFKRVANI-SKDVDLDGDLSIDIS--LFKEEAEVALYTAY 615 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 H D Y + L + ++ +FD V+VN +D ++ NRL + I Sbjct: 616 EKV-IH----QDFPDYKTRLEALFGLKRELDTYFDDVMVNTEDEALKTNRLHTIGSIYKT 670 Query: 692 ILIVINVQKI 701 + ++++I Sbjct: 671 FRDIADIKEI 680 >gi|33240281|ref|NP_875223.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237808|gb|AAP99875.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 721 Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 202/747 (27%), Positives = 346/747 (46%), Gaps = 96/747 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI +EE+PA A L ++ LK+ + Y+ +R TP R+F+ + L+ Sbjct: 1 MSNFLLEIGTEELPADFARLAISQLEELVQNDLKQNRIQYELIRCSSTPRRIFVIVNNLA 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 S + +EER GP + G A +GF + GL + D +I++ K V+ V+ Sbjct: 61 SSSDDFVEERKGPPATKAFKNGCPTPAAEGFAKRYGL-LVEDLEIRETVKGPFVFGKVVE 119 Query: 115 K--PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K P + D+L ++P I + + MRW + S S RP++ ++ +L + K Sbjct: 120 KGGPSK---DLLVDLIPNWINSIQGKRFMRWGSGDSRFS-----RPVRWLVALLDDNEIK 171 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 K+ D D EI G ++ GHR + I ++S Y L A V++D E R + I + Sbjct: 172 VKLPDTD-PEILSGRLSRGHRL-VSNEILIESSGEYFEILRGAGVIVDREERLDLIKSLV 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-- 290 + + V LL E+ LVE + G F++ +L LP E++ ++ +Q+ Sbjct: 230 EKSSLEVNATADLTSKLLNELTDLVELPYLIRGEFNESFLELPAEVLSTVMQVHQRYIPL 289 Query: 291 ---------VTRTREGVLANCFILVSN--IQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 + +G+L F+ + N Q+ D I +GN RV+ AR DA F Sbjct: 290 YKNDDEVDPLALEAKGILTPFFLCICNGLPQSKD---LIKEGNERVLKARFADAKFFINA 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGK 398 D+ LSS +R D L +V F +G+ +RV RI L + Sbjct: 347 DRG----LSS-------------------TSRTDQLKNVTFADGLGSLYDRVKRIEWLAE 383 Query: 399 ---KIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 K + + + +A L K DL + +V EFPELQG IG +Y + + E+ A+ Sbjct: 384 LFIKTVNFPEGNSNFLRKASSLCKHDLVSHMVGEFPELQGIIGAKYLLAEGESREVALAV 443 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 E PRG + +P + + ++L ++++ L++ ++ E+PSGS DPYALRRA G+++I Sbjct: 444 LEQYLPRGYADKLPESFVGSALALIERIELLLSIYSKGERPSGSSDPYALRRAGNGVLQI 503 Query: 516 ILENKIDIPLSQF----------------IEDQNLIL----FFHDRLKLYLHDRDIRHDL 555 I + I L + ++++NL+ FFH R+ L + I D+ Sbjct: 504 IWNKEWKINLLELLTISSSYWLKLFPSFKVDEENLLSDLLDFFHQRIVSLLEESSIDVDI 563 Query: 556 IEAILR---PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ---ILAIEEKKNRE 609 I+A+ P L D+ + + + K L + + + LA + N + Sbjct: 564 IQAVAGETIPHERLLADPTDVFERVT-LLQQMRTSKKLSAVQSVVNRASKLAEKGTLNTD 622 Query: 610 I---SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + S + P ++E + VI+ I S RY ++ + L + + FFD Sbjct: 623 VLSASNVVDPSLFESQSENSMLEVINSL-EPIAISNSPDRYMKLAEGLAFGSKALAEFFD 681 Query: 667 ---QVLVNVDDREVRDNRLSLLQYIKN 690 V+V ++ +R+NRL+LL ++N Sbjct: 682 GEQSVMVMTTNKSIRENRLNLLSVLRN 708 >gi|86607462|ref|YP_476225.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. JA-3-3Ab] gi|86556004|gb|ABD00962.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. JA-3-3Ab] Length = 730 Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 198/754 (26%), Positives = 327/754 (43%), Gaps = 87/754 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLE+ EE+PA A E + L E + + M+ + TP RL + L+GL Sbjct: 1 MVAYLLEVGCEELPASFVDSALEQWRTGIPASLAEAHLQAEQMQLFGTPRRLSVLLQGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTG-----LQTISDCQIK-KDPKKGDVYLAVLR 114 P++ E GP V + DG L G Q + ++ + KG AV R Sbjct: 61 TQQPDRTLEVKGPPVQVAYQ--DGRLTPAGEKFAQKQGVDPGSLEIRQVGKGSFVFAVQR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R VL+ + P I + + MRW + RP++ ++ + +++ Sbjct: 119 VRGRPTAAVLQELAPTWITSLSGERLMRWG-----YGDLKFPRPIRWLVSLW-----EDQ 168 Query: 175 IIDL--------DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++ L L + G ++ GHR + ++ + Y++ ++EA V DP R Sbjct: 169 VLPLLWPTSEGNPLPGLVAGRVSRGHRVLGSQQVVLERAESYVQQMQEAGVSPDPTAREA 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I + +LA V E LL E++ LVEW +G F+ ++L LP +I + T+ Sbjct: 229 YIQAEVTKLARQVNGEAQIPAPLLREVVHLVEWPTAVLGRFEPEFLRLPPAVIETVMITH 288 Query: 287 QKCFVTRTREGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 Q+ F R L FI +SN I GNSRVV ARL DA F++ D+ Sbjct: 289 QRYFPVRDGRDPRKLLPYFITISNGDPRQS-ERIGAGNSRVVRARLADARFFYEEDRR-- 345 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 PL QR+ RL V F +G+ ++V RIR + + IA + Sbjct: 346 ------------------IPLAQRVERLQA--VTFAEGLGSMRDKVERIRHISRLIAAAL 385 Query: 405 DADV---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + D ALVDR L KADL T++V EFPELQG +G EYA E + + IE+H P Sbjct: 386 NLDPQEQALVDRTAYLCKADLVTQMVYEFPELQGIMGAEYARQDGEPEAVAEGIEQHYWP 445 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 G E +P + V AD+LDTL+ + + + P+GS D +ALRRA ++ I + Sbjct: 446 LGAGEALPASLTGRVVGWADRLDTLVGMFRLGQIPTGSSDRFALRRAANSLVLIAWDAGW 505 Query: 522 DIPLSQFIE---------DQNLILFFHD-----RLKLYLHDRDIRHDLIEAILR-PEN-- 564 + ++ D+ + + L ++ I +DL+ A++ PE Sbjct: 506 TFDFNSLLQRVVQDYAAGDEKTLKALQEFLLQRLQILLQEEKRIDYDLVRAVVGDPEALQ 565 Query: 565 --------------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI 610 NL + ++L ++ + + R ++ A + + + Sbjct: 566 EGEPAKSDLPRRALANLPLTLLRAEYLQHLRATGELADLYPTLNRCARLAAQGDLDSAVL 625 Query: 611 SLEISPQYLLLE--AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 + LL+ AE+ LY E + + + L + ++ FF+ V Sbjct: 626 DPAAAVDADLLQEAAERELYEACQRVYRLGVEPALQGDFTPLVEGLQAAAPAVDRFFEAV 685 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 LV D +R NRL+LL ++N ++ ++ +V Sbjct: 686 LVMDPDPRLRANRLNLLGVLRNQSRLLGDMGAVV 719 >gi|317123698|ref|YP_004097810.1| glycyl-tRNA synthetase beta chain [Intrasporangium calvum DSM 43043] gi|315587786|gb|ADU47083.1| glycyl-tRNA synthetase beta chain [Intrasporangium calvum DSM 43043] Length = 1020 Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 184/713 (25%), Positives = 323/713 (45%), Gaps = 81/713 (11%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 LEI EE+P + +A E + L L + + ++ TP R+ + + H P+ Sbjct: 336 LEIGVEELPPHVVPEAIEQVRTALTQKLGATRLPHGSVVVQGTPRRIIALVDAVGVHEPD 395 Query: 66 KIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV-LRKPK 117 R GP+V GA KA +GF R Q + + + G ++AV + + Sbjct: 396 AETLRKGPKVAAAFGPDGAATKAAEGFARG---QKVDVSDLVRAEFDGVEHVAVRVAETG 452 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R + +VL +I+ + + K+MRWS P A+S RP++ I+ + + ++ Sbjct: 453 RGVLEVLGSIIADVVAGLRADKNMRWS---DPELAYS--RPIRWIVALW-----GDTVVP 502 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + G TYG R A I+V++ D + L E ++DP RR ++++ A LA+ Sbjct: 503 VTVSGLRSGRTTYGERTEAGPLIEVENADVLLPKLAERDFIVDPVARRESVVSQAKSLAA 562 Query: 238 AVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +VG +++ + L++EI LVE +GSF+++YL LPE+++ ++ +Q+ R+ Sbjct: 563 SVGGAVDVEGEAALVDEITHLVEAPHGILGSFEERYLELPEQILTTVMRKHQRYLPVRSG 622 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L F+ ++N + D + +GN V+ AR EDA F Sbjct: 623 DGALLPYFVTMANGECDDD--LVRKGNENVLRARYEDAAFF------------------- 661 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVD 412 + DL PL++ R + + F +IG+ +R RIR + +A+L+ D A + Sbjct: 662 -YAADLKVPLEE--LRAGIAKLTFEERIGSVADRADRIRDVAAALAELVGLDASEGATLA 718 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+K DL +++V E L G + +EYA+ E A+ E +PR +P ++ Sbjct: 719 RAGQLAKFDLASQMVVELSSLAGFMAREYALKAGETPEVAAALYEMEQPRTAGGPLPASR 778 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----------LENKID 522 ++LAD+ D L+ +A+ KP+GS DP+ALRRA LG+I I+ +E + Sbjct: 779 AGAVLALADRFDLLMAMFALGAKPTGSSDPFALRRAALGVIGILRSQPTLAGLTIEQGLH 838 Query: 523 IPLSQFIED---------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 Q + + + F R L + + L A+ +P Sbjct: 839 AAADQLRQQGLDVSAEAIADAVEFVTGRFGQQLREEGVPSTLAGAV-QPLAGTPGKAEVA 897 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + K + + +RI +I+ + PQ L EAE+ L + Sbjct: 898 LRDIETVRGREGFAKLVEATQRITRIVPEGSPAAYD------PQVLREEAERELSVALET 951 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + + + +E FFD+VLV +D +R RL LLQ Sbjct: 952 I-----PDLSGAALPEWAGVAVRAVPALERFFDEVLVMAEDPALRAARLGLLQ 999 >gi|195953956|ref|YP_002122246.1| glycyl-tRNA synthetase, beta subunit [Hydrogenobaculum sp. Y04AAS1] gi|195933568|gb|ACG58268.1| glycyl-tRNA synthetase, beta subunit [Hydrogenobaculum sp. Y04AAS1] Length = 666 Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 200/721 (27%), Positives = 348/721 (48%), Gaps = 106/721 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY-QNMRQYWTPHRLFLYLKGL 59 M D LLE+ +EE+P+ KA E L I+I LK++ + + + + TP R+ + ++ L Sbjct: 1 MNDILLELQTEELPSLFLLKANETLKDIVISFLKDKNIEKDKTISLFTTPRRIGILIENL 60 Query: 60 SPHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 H+ ++ +GP + G KA++ FL+ S + K K+G VY+A+ Sbjct: 61 PDHNKKEEILVIGPPYEACYKDGVPTKALEAFLKKNN---ASLEETFKYEKQGGVYIAIK 117 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ + IE++ K I+ + + K MRW S+ + RP++ I +L Sbjct: 118 KQTGGIPIEELFKEFPDFIIKSLNYKKMMRWDN-----SSMRFPRPIRGIALVLN----- 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 D +P N + GHRF + + ++ Y L++ V+ + R++ IL+ Sbjct: 168 ------DRPILPYKNTSKGHRFLSNEFV-IEHAKAYEELLKKHYVIPTFKERKSIILDLV 220 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A + + +++L++EI LVE+ + +G F+K++L LP+ +I+ + +QK F+T Sbjct: 221 LSKAKELNVTPDYEEELIDEITNLVEYPYIVIGEFEKEFLSLPDIVIKTVLAHHQK-FIT 279 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G+ N F +SNI+ D I G +VV ARL DA+ F+ Sbjct: 280 TKKDGI-TNIFFGISNIE--DKKGYIKNGYQKVVKARLRDAIFFY--------------- 321 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 N DL KP + L ++FH K+GT ++ R LG + +D +++ Sbjct: 322 -----NEDLKKPFHFFVEELK--GIMFHHKLGTLFDKTKRHIALG----EYLDHQNSVLI 370 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LS D+ T +V+EF ELQG +G Y +NE+ A+ E P +E + + K Sbjct: 371 RACELSLFDIATNMVKEFDELQGYMGMIYVKAKNEDEELSKALLEQYMP-DKIEGIQSTK 429 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------ 526 + + K D +++ A E P G+ D Y ++R GII+ IL++++DI L Sbjct: 430 TGALLGIIVKSDNIVSLIAAGEIPKGTSDAYGIKRNIYGIIKTILDHELDINLEELFGKV 489 Query: 527 -QFIEDQNLIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + +E++ +L F RL Y + +D++ A+L E+ L + D I Sbjct: 490 FELLENKEKLLSYEEILSHIKNLFKTRLNTYFEEYP--YDIVRAVLEVEDP--LKVKD-I 544 Query: 575 KHLNEFFSSAKG--EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K+ E SS + E + KRI +IL ++ ++I E+ L EK LY ++ Sbjct: 545 KNKIELLSSNRDIVENIAKAYKRIRKILP-KDFSPKDIKQELFESDL----EKELYKILE 599 Query: 633 D-----FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 D + E +DHK+ + I+ FFD++LV ++ +VR+NRLSLL Sbjct: 600 DIKDKELSKELLEYIDHKK------------KIIDEFFDKILVMAENIDVRNNRLSLLYN 647 Query: 688 I 688 I Sbjct: 648 I 648 >gi|319760170|ref|YP_004124108.1| glycyl-tRNA synthetase beta subunit [Candidatus Blochmannia vafer str. BVAF] gi|318038884|gb|ADV33434.1| glycyl-tRNA synthetase beta subunit [Candidatus Blochmannia vafer str. BVAF] Length = 701 Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 182/729 (24%), Positives = 338/729 (46%), Gaps = 74/729 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI ++E+PA+ +D + K+ ++Y + + +P L + + + Sbjct: 7 LVEIGTDELPAKFLKNIGKDFYSHIKNEFKKNNILYNEIYWFASPRHLAVKSRISIGKNQ 66 Query: 65 EKIEERLGPRVGAGKKAIDG--FLR----------STGLQTISDCQIKKDPKKGDVYLAV 112 + + R +D FL+ S+ + + + + + + D ++ V Sbjct: 67 SLFKSDVYNRSDIDNCIVDKNLFLKKKNNKFSQNISSHVNILEFNRFETEGIRQDKFINV 126 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R+ K L+ ++K A+ + ++MRW P +IRP+ ++ +L Sbjct: 127 -RQFKLLLVQIIKN----ALGNLINYETMRWGDVLIP-----FIRPVNTVTILLDTNIVS 176 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILND 231 +I + ++ I YG+R+ + I + + + Y L E+ V++D R+ I D Sbjct: 177 GRIFNKNINRI-----VYGNRYIKNNKIILNNANDYPNVLFEQGYVIVDYNIRKQKIRMD 231 Query: 232 A-HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 H+ G+ +++ D LE+I +EW + G F+K++L LP+ELI ++ Q+ F Sbjct: 232 VEHKALKLGGVVDIKNDDFLEKITSSIEWPIILFGKFNKRFLKLPKELIIHIMQDKQQYF 291 Query: 291 -VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 V + +L FI V NI D I+ + ++ R DA F K D N Sbjct: 292 PVYGKNQDILLPYFIFVINI-IIDNYNKIINDHENIINMRFLDAEFFLKNDNKN------ 344 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L+ +L ++VFH+++G+ ++V RI L IA ++ + Sbjct: 345 --------------RLEDYFPKLS--EIVFHSQLGSLKDKVHRITELSGWIANQVNENEF 388 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L K DL T++V EFPE+QG +G YA E A +EH +PR + +P Sbjct: 389 KARRAGYLCKCDLVTDVVLEFPEVQGIMGMYYAQRDGEEKEVALAQKEHYQPRYYTDKLP 448 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T +IS VS+ADK+DT+ +++ E P+GS+DP+ L+RA GI+ I+LE + I L I Sbjct: 449 TERISCIVSIADKMDTISGIFSVKEFPTGSRDPFGLKRAAKGILNIVLEKNMPINLLDLI 508 Query: 530 E-----------DQNLI-------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 D +LI F RL LY + +++ ++L N++ + Sbjct: 509 SKSIMLYKLQLVDDDLINIKNDVYTFMCQRLCLYYRALGYKENIVRSVLNIRFGNIINLG 568 Query: 572 DLIKHLNEFFS--SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I ++ F++ KG F L KRI ++ + I+ EI+ L E +L+ Sbjct: 569 KHIDSVHNFYTIQKEKGAMFNLVYKRISNLIR-NQNVFCNITEEINKTLLKSLEEIKLFE 627 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I+ ++ + RY +++ ++ F D V + ++ +++NRLSL++ +K Sbjct: 628 QITYTKMNLNSVLQESRYSDALNIVENLFHRTNFFLDNVFIMSKNQNIKENRLSLIKTVK 687 Query: 690 NIILIVINV 698 +++ VI++ Sbjct: 688 DLVSRVIDI 696 >gi|284033696|ref|YP_003383627.1| glycyl-tRNA synthetase subunit beta [Kribbella flavida DSM 17836] gi|283812989|gb|ADB34828.1| glycyl-tRNA synthetase, beta subunit [Kribbella flavida DSM 17836] Length = 996 Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 189/737 (25%), Positives = 323/737 (43%), Gaps = 96/737 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI +EE+P K A+ + L L + + + Y TP R+ ++ + Sbjct: 311 LLFEIGTEEMPPSEVTKTADAVRTALTEKLAATRLGHGTVTTYATPRRVVAFVTEVQAVE 370 Query: 64 PEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ GPR A KA GF R G+ T + D G Y+AV + Sbjct: 371 PDAERVVRGPRKSAAFDAEGNVTKAAAGFARGQGVGTDQLHDLDVD---GVEYVAVTKPD 427 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R +VL ++ + + K+MRW+ + S+ RP++ ++ +L +++ Sbjct: 428 PGRGAAEVLSGVLSEIVSGLRSDKNMRWND-----AKLSFTRPVRWLVALL-----GDQV 477 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + G T HR A +++ + + Y+ L + DP RR I+ A L Sbjct: 478 VPVAASTLAAGRTTRVHRTAAQPTVEIAAAEGYLDLLRIHGIEADPARRREQIVTAAQEL 537 Query: 236 ASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A A G +++ + L+++I+ LVE +GSF YL LP E++ ++ +Q+ R Sbjct: 538 AKAAGGSVDVEGESALIDQIVNLVEEPTAILGSFSADYLDLPAEILTTVMRKHQRYLPVR 597 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L F+ V+N + + GN V+ AR EDA FW+ D P Sbjct: 598 DADGTLLPHFVAVANGSVDED--TVRTGNEGVLRARYEDAAFFWRADLQTTPE------- 648 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 +K LD + F ++G+ +R RI + + +A L D+ Sbjct: 649 TMKGELD---------------KLAFEQRLGSMAQRAGRIGRIAESLAGTVGLAGDDLTT 693 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L+K DL +++V E L G + +EYA E + A+ + PR + VP+ Sbjct: 694 LRRAAELAKFDLGSQMVVELTSLAGTMAREYARRAGETEAVAQALYDMELPRSAGDPVPS 753 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN----KIDIPL- 525 ++LAD+ D L +AI KP+GS DP+ALRRA G++ I+ E+ I +P+ Sbjct: 754 TTPGALLALADRFDLLAGLFAIGAKPTGSSDPFALRRAAAGVVAILREHPELRAITLPVG 813 Query: 526 ---------SQFIEDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +Q IE L F R + L DR H + A+L P + T Sbjct: 814 LAAAADQIGAQGIEVPAESLAEVSEFSVRRYEQQLIDRGDDHHQVAAVL-PLAEAPATAD 872 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY----LLLEAEKRL 627 + + L + E F +++A+ ++ R + + PQY L AE L Sbjct: 873 ETLAELRRQVET---EGFA-------ELVAVLQRVRRIVPADTDPQYDPSKLTEPAEVVL 922 Query: 628 YAV---ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + +S T + E + + EP+ FF+++LV +D +VR RL L Sbjct: 923 HEAVQKVSPAPTTLAEFVPAAAV---------LVEPVTTFFEEILVMAEDSDVRAARLGL 973 Query: 685 LQYIKNIILIVINVQKI 701 L I+++ +++ Q + Sbjct: 974 LATIRDLAAPILDWQAL 990 >gi|126696157|ref|YP_001091043.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9301] gi|126543200|gb|ABO17442.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9301] Length = 720 Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 195/751 (25%), Positives = 348/751 (46%), Gaps = 99/751 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA+ + E ++ L ++ + ++++ TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPAKFSYSVLEQFKSLIEFELDKKLIKFEHIVVTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ +KI ER GP+ G A GF S + + + +IK + +KGD Sbjct: 61 DYAEDKIIERKGPKANSAYLNGCPTNAALGFANSLDIN-VGELEIK-NTEKGDFVFGKKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L +I+P ++ + + M+W + S RP++ I I ++ Sbjct: 119 EKGLSTKISLSSIIPKLVKSLQGARFMKWGAGNMKFS-----RPIRWIASIY-----NDE 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+D + E I N T HR ++VQ+ D + L+ V+ + R+ I + Sbjct: 169 ILDFEFDECDPKIKISNKTKSHRL-INEVLEVQNPDEFFELLKRNRVIAIRKERKEKIES 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 ++ + ++ LE + LL E+ LVEW + +G F ++L LP E++ +K +Q+ Sbjct: 228 LINQASKSLNLEPDLSEGLLNELTDLVEWPDLIIGKFSNEFLDLPVEVLSTVMKIHQRYV 287 Query: 291 -----------VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 + + E ++ F ++SN + I +GN +V+ AR DA F + Sbjct: 288 PLLLKNESFSKLDLSSEKNISTTFCVISN-GLEESNNNIAKGNEKVLRARFSDAKFFVES 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K ++++ N L V + +G +RV RI + KK Sbjct: 347 DK---------KVASIERNEKLK-------------SVSYLKGLGNIFQRVERIEEVTKK 384 Query: 400 IAQLIDADVALVDRAIV----LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 I + ++ D +L ++ I+ K DLC+EIV EFPELQG +G +Y + + C A+ Sbjct: 385 ILKFLN-DKSLEEKKIIEAAKYCKNDLCSEIVFEFPELQGIMGAKYLKYEGFSEDVCLAV 443 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 EH P + +P+ K VS+ADK++TLI+ + ++PSGS DPYALRR G+I+I Sbjct: 444 AEHYLPSFYKDALPSTKYGAIVSIADKVETLISIFISGKRPSGSSDPYALRRNLNGVIKI 503 Query: 516 ILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDL 555 I + + D+PL + + +L F R+ +L + + +L Sbjct: 504 IWDYEFDLPLDKLFNELIDFWKIAFPNLNFSREKVFNDLNEFLVQRIVSHLEEISLSKEL 563 Query: 556 IEAILRPE---NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 I A+ + +L IVDL + + E F+ K I + A + N ++S Sbjct: 564 IRAVCSSDELSKKRVLNIVDLKNRIKSIMDFNEKENFVEIQKVITR--ASKLANNSDLST 621 Query: 613 E-------ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + ++ + + E +++ I + E D+ Y ++ +L IE F Sbjct: 622 DVLATRDYVNTKLFEKDCELKVFEFIEELEKLFSE--DYCNYLELLNLFEINVNTIEDLF 679 Query: 666 DQ---VLVNVDDREVRDNRLSLLQYIKNIIL 693 D VL+ +D ++R+NRL+LL I+N L Sbjct: 680 DNEKGVLIMSEDLKIRNNRLNLLSLIRNYSL 710 >gi|124025502|ref|YP_001014618.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. NATL1A] gi|123960570|gb|ABM75353.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. NATL1A] Length = 720 Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 171/602 (28%), Positives = 284/602 (47%), Gaps = 78/602 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA + L + + L + + + TP R+ L ++G++ Sbjct: 1 MSTYLLEIGTEELPADLAESVISQLELSVNNDLNSAQIKFSEISVTTTPRRIALTIEGIA 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P S + I ER GP V G KA GF + L +I++ K V+ + Sbjct: 61 PFSEDNIAERKGPPVSQAFHDGQPTKAAIGFAKRYELSP-EKLEIRETSKGSFVFAKSIE 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K K + +L +P I K+ + MRW F + RP++ I+ +L +E K Sbjct: 120 KGKP-VTTLLSDYLPRWISKIQGRRFMRWGKGD-----FRFSRPIRWIVSLLDSEVLPFK 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND--- 231 I D EI GNI+ HR + +K+ Y L++ V +D RR + +ND Sbjct: 174 ISGCD-PEIQIGNISRPHRLYGAK-LKINDAKTYFDQLQDVGVTVD-RGRRLSCINDLVL 230 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF- 290 H + V +L + LL E+ L+E + G FD+ +L LP E++ +K +Q+ Sbjct: 231 NHEIDKKVKPDLTDP--LLNELTDLIESPLLVTGCFDETFLELPPEVLSTVMKVHQRYIP 288 Query: 291 ----------VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 ++ + +L F+ +SN + I++GN +V+ AR DA F K D Sbjct: 289 LYKVNVEFDPLSLDSKNILLPTFLCISNGLPT-AKEKIIKGNEKVLKARFADASFFIKSD 347 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 L S+ + N + DV F +G+ ERV+RI L K + Sbjct: 348 L--------LISSSSRIN--------------KLKDVTFAEGLGSLYERVNRIEWLVKLL 385 Query: 401 AQLIDADVALVDRAIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ D + +++ SK DL + +V EFPELQG IG +Y + + E+ C + E Sbjct: 386 TLKLEFDQEDIQKSVKVAHFSKHDLVSNMVDEFPELQGIIGSKYLLHEGESRDVCLGVLE 445 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H KP+G +++P+N + VSL ++ + LI+ +A E+PSGS DPYALRRA GI+ I+ Sbjct: 446 HYKPKGTSDSLPSNNLGNAVSLGERFELLISIYAKGERPSGSSDPYALRRAANGILLILW 505 Query: 518 ENKIDIPLSQFIED----------------QNLIL----FFHDRLKLYLHDRDIRHDLIE 557 + +++ ++D NL+ FF R+ L ++D+ D+I+ Sbjct: 506 NKDWQLNINKILDDSLIYWQQLFPSLSLDISNLLSELKEFFRQRIISLLEEKDVEFDIIQ 565 Query: 558 AI 559 A+ Sbjct: 566 AV 567 >gi|297815990|ref|XP_002875878.1| aminoacyl-t-RNA synthetase [Arabidopsis lyrata subsp. lyrata] gi|297321716|gb|EFH52137.1| aminoacyl-t-RNA synthetase [Arabidopsis lyrata subsp. lyrata] Length = 1083 Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 183/740 (24%), Positives = 346/740 (46%), Gaps = 91/740 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F++EI +EE+P + A+E L ++++ LL+++ + + ++ + TP RL + + +S Sbjct: 385 SFIIEIGTEEMPPQDVINASEQLRVLVLELLEDQRLRHGAVKAFGTPRRLVVLVDAMSSK 444 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E+ E GP G KA DGF R G+ + +K K + A + + Sbjct: 445 QLEEEVEVRGPPASKAFDDQGNPTKAADGFSRRYGVPL--EKLYRKVSGKTEYVHARVTE 502 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + + Sbjct: 503 PARRALEVLSEDLPGILAKISFPKSMRWN------SSVMFSRPIRWVMAL-----HGDLV 551 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM----------VLLDPEC-- 223 + I GN++ G R A + VQ+ + Y E+AM +D C Sbjct: 552 VPFSFAGISSGNVSCGLRNTASASLFVQNAESY----EDAMRNSGINIEIEAFMDLCCHF 607 Query: 224 --------RRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLP 275 R+ IL ++ LA +V LV +DLL E+ LVE +G F + +L LP Sbjct: 608 IGYHNLQERKKIILEKSNALAKSVNGRLVVPQDLLNEVANLVEAPVPLIGKFKESFLELP 667 Query: 276 EELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALH 335 EEL+ + ++ +QK F G L FI V+N ++ + +GN V+ AR EDA Sbjct: 668 EELLTIVMQKHQKYFSIIDESGQLLPYFIAVANGAINED--VVKKGNEAVLRARYEDAKF 725 Query: 336 FWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV 395 F++ D S+ DQ + ++FH K+GT ++++R++ Sbjct: 726 FYEVDTRK----------------RFSEFRDQ------LQGILFHEKLGTMLDKMNRLKK 763 Query: 396 LGKKIAQLIDAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCC 452 + K+ ++ D + +V+ A L+ +DL T +V EF L G + + YA+ + + Sbjct: 764 MVSKLCLALEIDEDLLPVVEDAASLAMSDLATAVVTEFTALSGIMARHYALRDSYSEQIA 823 Query: 453 DAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI 512 +A+ E PR + +P + +++AD+LD+L+ +A +PS + DP+ LRR + G+ Sbjct: 824 EALLEITLPRFSGDVIPKTDAGMVLAIADRLDSLVGLFAAGCQPSSTNDPFGLRRISYGL 883 Query: 513 IRIILENKIDIPLSQFIE--------------DQNLILFFHDRLKLYLHDRDIRHDLIEA 558 ++I++E ++ + +E +++ F RL+ L D + +++ + Sbjct: 884 VQILVEKDKNVNFKRALELAASVQPTKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRS 943 Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY 618 +L +N + + +KGE F + + I K+ + +++ Sbjct: 944 VLAERGNNPCLAARTAYKMEKL---SKGEIFPKIVEAYSRPTRIVRGKDVGVGVKVDENA 1000 Query: 619 LLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 E+ L+ + I ++ + + ++ + EP+E FF+ V V V++ VR Sbjct: 1001 FETSQERTLWRTYTSIKDRIHTGIEIEEFTEVS---MQLVEPLEDFFNNVFVMVEEERVR 1057 Query: 679 DNRLSLLQYIKNIILIVINV 698 NRL+LL I N+ VI++ Sbjct: 1058 KNRLALLNNIANLPTGVIDL 1077 >gi|91070279|gb|ABE11197.1| glycyl-tRNA synthetase beta subunit [uncultured Prochlorococcus marinus clone HF10-88D1] Length = 720 Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 193/751 (25%), Positives = 352/751 (46%), Gaps = 99/751 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI +EE+PA+ H E ++ L ++ + ++ + TP R+ L L+GL Sbjct: 1 MSKYLLEIGTEELPAKFSHSVLEQFKSLIEFELDKKLIKFEQIVVTSTPRRIVLLLEGLV 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ +KI ER GP+ G+ A GF S + + + +IK + KKG+ Sbjct: 61 DYAEDKIIERKGPKANSAYLNGSPTNAALGFANSLDID-VGELEIK-NTKKGEFVFGKKI 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L +I+P ++ + P+ M+W + S RP++ I I ++ Sbjct: 119 EKGLSTKISLSSIIPKLVKSLQGPRFMKWGAGNIKFS-----RPIRWIASIY-----NDE 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+D + E I N T HR ++VQ+ D + L+ V+ + R+ I + Sbjct: 169 ILDFEFDECDPKIKISNKTKSHRL-INEVLEVQNPDDFFELLKRNRVIAIRKERKEKIES 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ--- 287 ++ + ++ L+ + LL E+ LVEW + +G F ++L LP E++ +K++Q Sbjct: 228 LINQASKSLNLKPDLSEGLLNELTDLVEWPDLIIGKFSDEFLDLPVEVLSTVMKSHQRYV 287 Query: 288 ------KCF--VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 K F + + E ++ F ++SN + I +GN +V+ AR DA F + Sbjct: 288 PLLLKNKSFSKLDLSSEKNISTTFCVISN-GLEESNNNIAKGNEKVLRARFSDAKFFVES 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K ++++ N L V + +G +RV RI + K Sbjct: 347 DK---------KVASIERNEKLK-------------SVSYLKGLGNIFQRVERIEEVTNK 384 Query: 400 IAQLIDADVALVDRAIV----LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 I + ++ D +L ++ I+ K DLC+EIV EFPELQG +G +Y + + C A+ Sbjct: 385 ILKFLN-DKSLEEKKIIEAAKYCKNDLCSEIVFEFPELQGIMGGKYLKYEGFSEDVCLAV 443 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 EH P + +P+ K VS+ADK++TLI+ + ++PSGS DPYALRR G+I+I Sbjct: 444 AEHYLPSFYKDALPSTKYGAIVSIADKVETLISIFISGKRPSGSSDPYALRRNLNGVIKI 503 Query: 516 ILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDL 555 I + ++D+PL + ++ +L F R+ +L + + +L Sbjct: 504 IWDYELDLPLDKLFKELIDFWKIVFPNLNFSRETVFNDLNEFLVQRIVSHLEEISLSKEL 563 Query: 556 IEAILRPE---NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 I+A+ + +L IVDL + + + + + K I ++ + N ++S Sbjct: 564 IKAVCTSDELSQKRVLNIVDLKNRIKSIMNFNEKDNIVEIQKVITRVSKL--ANNSDLSR 621 Query: 613 E-------ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + ++ + + E +++ I + E + Y ++ +L IE F Sbjct: 622 DVLSTRDYVNTKLFEKDCELKVFEFIGELEKLFSEG--YCNYLELLNLFEINVNTIEDLF 679 Query: 666 DQ---VLVNVDDREVRDNRLSLLQYIKNIIL 693 D VL+ +D ++R+NRL+LL I+N L Sbjct: 680 DNEKGVLIMSEDLKIRNNRLNLLSLIRNYSL 710 >gi|237736436|ref|ZP_04566917.1| glycyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] gi|229421478|gb|EEO36525.1| glycyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] Length = 527 Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 159/545 (29%), Positives = 278/545 (51%), Gaps = 68/545 (12%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI EE+PAR +A DL L L E + + ++ Y TP RL L + L+ + Sbjct: 4 LFEIGMEELPARFLKQALSDLKSNLETKLNNERIKFDEIKTYGTPRRLVLDVHNLAENQE 63 Query: 65 EKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR---- 114 + LGP G +A GF +S G++ +I PK G+ Y+A + Sbjct: 64 DLDLVNLGPAKSVAYVNGEISRAGLGFAKSQGIEP-EQLEIVSTPK-GE-YIAARKFMKG 120 Query: 115 -KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K L+ ++LK++V ++ +PKSM+W+ + RP++ L + +E Sbjct: 121 KATKELLSEILKSLV----LELNFPKSMKWADKK-----LRFARPVQWFLALCDSE---- 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ +++ I GN + GHRF +V +++ Y + E V++D E RR A++ D Sbjct: 168 -VVPFEIEGIASGNKSRGHRFFGKE-FEVSNVEEYFTKIRENNVIIDIEERR-ALVKDLV 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + G ++ +++LL+E+ L+E+ +GSF+ +L +P++++ ++++ +Q+ F Sbjct: 225 AKCAGAGEQVHIEEELLDEVTNLIEYPCPIVGSFNADFLEVPQDVLIISMQVHQRYFPIL 284 Query: 294 TREGVLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L F++V N I++SD + +GN +V++ARL DA F++ D Sbjct: 285 DTNGKLLPKFVVVRNGIESSD---FVRKGNEKVLSARLADARFFYQED------------ 329 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L PL + +L VVF +GT +++ R K+IA + + D Sbjct: 330 --------LKHPLADNVEKLKT--VVFQKDLGTIYQKIER----SKEIATYLIDVLGCAD 375 Query: 413 R------AIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 R + L+KADL + ++ +EF +LQG +G +YA+ EN I+EH PR Sbjct: 376 RKEDVLRTVYLAKADLVSNMIGEKEFTKLQGFMGADYALKSGENERVSLGIKEHYYPRFQ 435 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +PT I ++D++DTL+ + + PSGSKDP+ALRRA LGI +I+ +K++I Sbjct: 436 GDLLPTEMEGIIAGISDRIDTLVGCFGVGVIPSGSKDPFALRRAALGIANVIVNSKLNIS 495 Query: 525 LSQFI 529 L + Sbjct: 496 LKALV 500 >gi|271969909|ref|YP_003344105.1| glycine--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270513084|gb|ACZ91362.1| Glycine--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 991 Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 191/727 (26%), Positives = 322/727 (44%), Gaps = 100/727 (13%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 EI EE+P +AA+ + L L + + ++ +P R+ ++ ++P + Sbjct: 313 FEIGVEELPPAETTRAADAVRQALTEKLAATRLRHGSVTVMSSPRRIVALVEDIAPREDD 372 Query: 66 KIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PK 117 + GPR+ GA KA GF R G+ ++ G Y+ ++ P Sbjct: 373 DEQTVRGPRLSAAYDAEGAPTKAAQGFARGQGIDV---AELAPLSAGGGEYVGYVKHVPG 429 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +VL I+P + + K+MRW SP S+ RP++ I +L AE ++ Sbjct: 430 RPAGEVLAAILPEIVTGLRAEKNMRW---RSP--GLSYSRPIRWITALLGAE-----VVP 479 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + ++ G + HR A I + + Y+ L + D RR+ I+ A RLA+ Sbjct: 480 FTVADLASGRSSRVHRTAAEPVITLSTATGYVETLRRHAIEPDAAVRRDDIVEQAARLAA 539 Query: 238 AVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G ++ + L++E+ LVE +G+FD+KYL LP ++ +K +Q+ F Sbjct: 540 GAGGRIDFEAESALVDEVTNLVEAPVAILGTFDEKYLELPAAILTTVMKKHQRYFPVLDG 599 Query: 296 EGVLANCFILVSNIQASDGGA----AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L N F+ ++N GA A+ GN V+ AR EDA FW+ D Sbjct: 600 DGRLLNRFVTIAN------GACDHDAVRAGNGAVLRARYEDAGFFWRND----------- 642 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 L+ PL + RL L F ++G+ ER RI + +A L D Sbjct: 643 ---------LATPLTEMKRRLARL--TFETRLGSVAERADRIDAIASDLAARALLGGDDG 691 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA L+K DL +E+V E L G + +EYA E + +A+ E PR + + Sbjct: 692 ETLRRAGRLAKFDLGSELVIELSSLAGVMAREYARQAGEPEAVAEALYEMELPRQAGDAL 751 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI------------- 515 P ++ ++LAD+ D L +AI +P+GS DP+ LRRA LG+I I Sbjct: 752 PRSRPGALLALADRFDLLAGLFAIGSEPTGSSDPFGLRRAALGVINILRAHPDLAGLTLR 811 Query: 516 ----ILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDR-----DIR--HDLIEAILRPEN 564 I + +P + DQ ++ F R + + ++ +IR L+++ +R E Sbjct: 812 EALAIAASHQPVPTDARLPDQ-VLDFVRRRFEQLMLEQGHPAANIRAVAGLVDSPVRAEQ 870 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + HL S+ ++ + +RI +I+ + L SP AE Sbjct: 871 --------TLDHLAALLSTEDFQELEAAVQRIRRIIPAGATPGYDPGLFDSP------AE 916 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + L + ++ D +R+ + + P+ +FFD+VLV DD VR NRL L Sbjct: 917 EGLATALEKARAGLRGETDLRRFAAEAAV---VVHPVTVFFDEVLVMADDPAVRANRLGL 973 Query: 685 LQYIKNI 691 L + ++ Sbjct: 974 LAAVHDL 980 >gi|78184814|ref|YP_377249.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9902] gi|78169108|gb|ABB26205.1| Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9902] Length = 720 Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 202/748 (27%), Positives = 327/748 (43%), Gaps = 106/748 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA +A + L + L E + + ++ + TP RL + + L Sbjct: 5 FLLEIGTEELPADFARQALDQLRERVPHDLAEARLSHGSISIFGTPRRLVVSIPDLDDRQ 64 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P+ EER GP V G A GF + G+ S + + PK V+ VL + Sbjct: 65 PDLREERKGPPVAQAFKDGVPGPAAIGFAKRCGIDA-SQLEQRDTPKGPCVFATVLTAGR 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPIS-AFSWIRPLKSILCILVAEDAKEKII 176 + +L+ ++P I + + MRW T S W+ L I V + ++ Sbjct: 124 DGVS-LLRELIPTWIDALQGRRFMRWGTGTQRFSRPIRWLVALHGDDVINVEMPGADPVV 182 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D + GHR + + + S D Y++ L++A VL+D + R I + A Sbjct: 183 RSD-------RYSRGHRLYGNQQLCIASADQYVKTLQKAGVLVDRDERSRLIRASIDQGA 235 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF------ 290 A E L EE++ LVE +V G +++L LP E+I ++ +Q+ Sbjct: 236 EAAEGEANCPDRLFEELVDLVEDPRVLQGQIAERFLQLPPEVISTVMQAHQRYVPLEIPG 295 Query: 291 -----VTRTREGVLANCFILVSNI--QASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + T E VL F+LV+N QAS A I +GN RV+ ARL DA F + D+ Sbjct: 296 LDPDPLRLTAEAVLRPEFLLVANGLEQAS---ALITRGNERVLGARLADAEFFLEVDRRQ 352 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 S+ + AL V F +G+ +R RI L ++ Sbjct: 353 A---SATRREALS-------------------RVTFAEGLGSLRDRCDRIERLTNQLL-- 388 Query: 404 IDADVALVD-------RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 D+AL D RA L K DL +++V EFPELQG +G +Y + + E+ A+ Sbjct: 389 --TDLALSDSVAMASRRAAHLCKHDLVSQMVGEFPELQGLMGGKYLLEEGESRDVALAVV 446 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH PRG + +P+ V+LA++ + L++ +A E+P+GS DPYALRRA G++ I+ Sbjct: 447 EHYLPRGAGDELPSTDAGAVVALAERFELLLSIFAKGERPTGSSDPYALRRAGNGVLLIL 506 Query: 517 LENKIDIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLI 556 + L+ F+ +L R+ L D DL+ Sbjct: 507 WNQGWKLDLNVFLAKAVEAWRELFPAFAVDTAQLTSDLSALLRQRITSQLEDDGYAADLV 566 Query: 557 EAILRPENDNLLTIVDLIKHLN-----EFFSSAKGEKFLLSAKRIFQILA-IEEKKNREI 610 +A+ D + T L L+ + + + L + + + Q + + EK + + Sbjct: 567 QAV---AGDTVSTTRLLHDPLDVRVRIQLLHGLRDQGRLTAVQAVVQRASRLAEKGDLPL 623 Query: 611 ----SLEI-SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 S E+ P +EK L+ D + + Y ++ D+L +E FF Sbjct: 624 DVLSSTEVVDPSRFESASEKGLF----DATERLNPLAERGAYQELCDVLVESTPALEAFF 679 Query: 666 D---QVLVNVDDREVRDNRLSLLQYIKN 690 D V+V DD +R NRL+LL ++N Sbjct: 680 DGDQSVMVMADDPALRMNRLNLLGVLRN 707 >gi|317122966|ref|YP_004102969.1| glycyl-tRNA synthetase subunit beta [Thermaerobacter marianensis DSM 12885] gi|315592946|gb|ADU52242.1| glycyl-tRNA synthetase, beta subunit [Thermaerobacter marianensis DSM 12885] Length = 766 Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 169/530 (31%), Positives = 270/530 (50%), Gaps = 53/530 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ EEIPA +A L+ L E G+ Y+ +R TP RL L +KGL+ Sbjct: 6 DLLVEVGCEEIPAGDCAEARRQLAERAGTALAEAGLPYEVVRTLGTPRRLTLIVKGLAAR 65 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP A +A GF R G+ ++D +++ +G+ A + Sbjct: 66 QEAREEWVRGPSKAAAFGPDGEPTRAALGFARGQGVD-VADLVVRQT-LQGEYVFARKVR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL +P + + + ++MRW ++RP+ ++ +L E++ Sbjct: 124 EGRPAAEVLAEQLPAILGGLEFRRTMRWGAGE-----HRFVRPVHWLVALL-----GEEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSL--DHYIRDLEEAMVLLDPECRRNAILNDAH 233 + + + G TYGHRF P +++ S D Y R L EA V++DPE RR I+ A Sbjct: 174 LPVSFAGVRAGRKTYGHRFLHPGAVELASASEDEYRRRLAEAYVVVDPEERRQRIVEQAR 233 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VT 292 +A+AVG E D +LL+E++ LVE+ F GSF + L LP +++ T+K +Q+ F V Sbjct: 234 AVAAAVGGEAEIDPELLDEVVDLVEYPTAFTGSFAAEMLELPRDVLVTTMKVHQRYFPVR 293 Query: 293 RTREGVLANCFILVSNIQAS--DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + E L FI V N D + QGN RV+ ARL DA F+++D+ Sbjct: 294 QPGESRLLPYFIAVRNGDRRHLD---TVRQGNERVIRARLADARFFFQQDRQ-------- 342 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---AD 407 + L R+A D+ V F +GT ++ R+ L +AQ +D + Sbjct: 343 ------------RRLADRVA--DLERVSFLPGLGTLLDKTRRLERLVGWLAQRLDLPSPE 388 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 RA L+KADL T +V EF EL G++G+EYA+L E + +A+ E PRG + Sbjct: 389 REQAARAAHLAKADLVTSLVYEFTELAGRMGREYALLDGEPPAVAEALAEQYLPRGGDDG 448 Query: 468 -VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 +P+ + +++AD+ DTL +A +P+GS+DPY LRRA +G++R++ Sbjct: 449 ELPSTWPGLLLAIADRADTLAGCFAAGLEPTGSQDPYGLRRAGVGLLRLL 498 Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 6/159 (3%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ F RL+ L + HD+I+A+L + ++ + + + +S L Sbjct: 600 RLLDFLAARLRGLLAEAGYAHDVIQAVLAVDGRDVPGVWARARAVAGLLASPLAADVLTV 659 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 +R + E + +L P+ E+ L+A + +QE++ + Y Sbjct: 660 HRRAANLAGRAEADAVDPALFREPE------EQALHAAVEAAAGAVQEALAVRDYGAYFR 713 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + ++ F D+VLV +D +R NRL+LL+ + ++ Sbjct: 714 AIAGLRPAVDAFLDRVLVMAEDPALRANRLALLKRVADL 752 >gi|99036057|ref|ZP_01315093.1| hypothetical protein Wendoof_01000063 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 494 Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 159/502 (31%), Positives = 255/502 (50%), Gaps = 58/502 (11%) Query: 224 RRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDK-KYLCLPEELIRLT 282 R+ IL+ ++ L+L ++ LL E+ GL+EW V G ++ K LP+E+I Sbjct: 4 RKQFILDQINKFTKEQNLQLEKNDYLLNELTGLIEWPIVLFGEVNQEKSFGLPKEVILSI 63 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + QK G + F+ V N+ +V+G+ R++ ARL DA +D+ Sbjct: 64 VNIQQKYLALSN--GKRISHFVTVVNVNN----GEVVKGHERILEARLADAQFLISQDK- 116 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 KE+ LD + +L ++FHA +G+ GE+V RI L K IA Sbjct: 117 --------KEN-----------LDYYVKKLG--SILFHASLGSVGEKVKRITALSKYIAI 155 Query: 403 LI-DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 I A + V+RA L+KADL T IVREFPELQG +G YA E+ +AI EH KP Sbjct: 156 FIPHASLIKVERAAYLAKADLATSIVREFPELQGVMGGYYASYFQEDKEVVEAITEHYKP 215 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 GP + P + +I VS+ADK+D+L+ A EK SGS D + LRR T+GIIR ILEN + Sbjct: 216 IGPEQECPKSPSAIAVSIADKVDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILENNL 275 Query: 522 DIPL-----------SQFIEDQN---------------LILFFHDRLKLYLHDRDIRHDL 555 +P+ S+ + ++N + F +R K+ L +RDIR D+ Sbjct: 276 HVPIRLMIDKSVSLYSRLLFNKNTASVDKPNRKQISELVFRFCLERFKVILKNRDIRQDV 335 Query: 556 IEAIL-RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLE 613 +++IL + + ++LLT L+ + S+ +GE+ L + KR+ +++ K + S Sbjct: 336 VDSILYKIDINDLLTAEKRTVILDRYLSTPEGEQILSTYKRVSNMMSKARKSDGTTYSAS 395 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 ++L+ E L +I++++ + ++ D L I F D + +N D Sbjct: 396 YGKRFLIESEEIALSNCAITACKNIKQAIKNNHFNVALDELAGFAPFINQFMDSIKINCD 455 Query: 674 DREVRDNRLSLLQYIKNIILIV 695 ++R NRLSLL+ + +I +V Sbjct: 456 SDKLRRNRLSLLENVVSIFHLV 477 >gi|116074692|ref|ZP_01471953.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9916] gi|116067914|gb|EAU73667.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9916] Length = 719 Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 204/740 (27%), Positives = 330/740 (44%), Gaps = 91/740 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA A L + L + + + ++R TP RL + +K L+ Sbjct: 5 FLLEIGTEELPADFARLALPQLQERVQRDLADLRLAHGDVRVSSTPRRLAVQVKALAEGQ 64 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + EER GP V G A GF + G+ + +++ PK GD A ++ Sbjct: 65 EDLCEERKGPPVAQAFKDGQPGPAAIGFAKRCGVDPAA-LEVRSTPK-GDCVFATVQVKG 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPIS-AFSWIRPLKSILCILVAEDAKEKII 176 + +L+ +P I + + MRW S W+ L + V A E ++ Sbjct: 123 QPALSLLQDCIPAWIDALQGRRFMRWGNGDQRFSRPVRWLVALLGTEIVPVTLPASEPVV 182 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 G + GHR H P ++V S D Y L V D + R I + A Sbjct: 183 H-------SGRCSRGHRLH-PGGVEVASADDYDTALAAVGVHADRQQRAALIQSSLQERA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 S+ L L EE++ LVE ++ G +YL LP E+I ++++Q+ +V TR Sbjct: 235 SSFDGALDCPSGLFEELVDLVEDPRIIQGEIADRYLDLPPEVIVTVMQSHQR-YVPLTRS 293 Query: 297 GV------------LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 GV L F+LV N AS A I +GN RV++ARL DA F Sbjct: 294 GVQPDPLRLASRDVLRPEFLLVGNGLAS-ADAQIRRGNERVLSARLADAEFF-------- 344 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA--- 401 N+D +P R R + V F + +G+ +R RI +L + Sbjct: 345 ------------LNVDRKQPSADR--REALSRVTFASGLGSLLDRTERIELLAASLVTAL 390 Query: 402 QLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 QL A RA K DL +++V EFPELQG +G +Y + + E A+ EH P Sbjct: 391 QLPAATADAAKRAAHFCKNDLVSQMVGEFPELQGLMGGKYLLEEGETREVAQAVVEHYYP 450 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN-- 519 RG +++P + V+LA++L+ L++ +A E+P+GS DPYALRRA GI++I+ + Sbjct: 451 RGAGDHLPQSDAGAVVALAERLELLLSIYAKGERPTGSSDPYALRRAGNGILQILWDRGW 510 Query: 520 KIDI--PLSQFIE----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 ++D+ L QF E +L+L R++ L D DL++A+ Sbjct: 511 RLDLFALLRQFAEVWQQQFPDFKVEAHSLAADLVLLLRQRIQSQLEDDGYEADLVQAVAG 570 Query: 562 PENDN---LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL-----E 613 + L +D++ + S +G++ + + + EK + E ++ Sbjct: 571 ETLSDQRLLADPLDVLDRIRLLGSLREGQRLGALQAVVQRAARLAEKGDLEATVLQADAV 630 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLV 670 + P +E ++A + ++ + Y Q+ D L +E FF D V+V Sbjct: 631 VDPGKFASPSETAMHAAV----LQLEPLAAARSYQQLADALVEATPALEAFFDGPDSVMV 686 Query: 671 NVDDREVRDNRLSLLQYIKN 690 DD ++R NRL+LL ++N Sbjct: 687 MADDLDLRRNRLNLLGVLRN 706 >gi|187250603|ref|YP_001875085.1| glycyl-tRNA synthetase subunit beta [Elusimicrobium minutum Pei191] gi|186970763|gb|ACC97748.1| Glycyl-tRNA synthetase, beta subunit [Elusimicrobium minutum Pei191] Length = 687 Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 177/723 (24%), Positives = 317/723 (43%), Gaps = 59/723 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLEI E +PAR A + + + + Y ++R + T ++ L+++GL Sbjct: 1 MKNALLEIGVEHLPARFVEGALRQMEALAAEQFAKYNISYASLRAFGTFRKIALHIEGLE 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFL-RSTGLQTISDCQIKK----DPKKGDVYLAVLRK 115 P S + +E GP K A F +S G + + +K + G A ++ Sbjct: 61 PKSKDISKEIKGPPAKLLKDANGNFTPQSAGFAQKNGIKPEKLSVVETPNGPFIYAKIKI 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L I + + +PK+M W S + RP+++++ + + + Sbjct: 121 KGEATKKLLPQIFTNIVTSLQFPKNMVWEE-----SGLRFARPIRTLIGLY-----GDAV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL--EEAMVLLDPECRRNAILNDAH 233 I + + G T+ IK+ S D YI L + +L +PE R+ + Sbjct: 171 IKFKVAGVESGRTTWPLSSFGTKGIKIASADSYIETLKNQPQPILAEPEERKEVLAKAIA 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + L V +DLL E + + E G F+ ++L LP+ELI +K K F Sbjct: 231 KEGELRNLTSVISEDLLNETVYMTEHPVAVPGDFEIRFLTLPKELIITVLKKQIKMFHMV 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + FI V + S +++G +V++ARL DA+ F+ +D N L++ KE Sbjct: 291 NKDGGIEPYFIAVRD-GMSVNQQEVMEGFKKVMSARLSDAIFFYNQDLNK--GLNAFKE- 346 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 ++A + +D +GT ++ R + L +A+ A +V + Sbjct: 347 --------------KLATVRFID-----GLGTMLDKTERTKKLALWLAEKCGAKKDIVGQ 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A ADL + +V EFPELQG +G YA+ +N+ A+EE P +P+ Sbjct: 388 AADYCYADLTSSVVYEFPELQGYMGGVYALKENKPTETAKALEEFYFPLTSTSELPSTLE 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S VSLA K+D + + + P+GS+DP+ALRR +GI+R++L+ + I + ++ Sbjct: 448 SAIVSLAGKMDAVTGNFLTGQIPTGSEDPFALRRQAIGIVRMMLDYNMPIAPKELVDYSV 507 Query: 533 -----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 L F R+ L + I +I + + + K L Sbjct: 508 KLYEKETDVYCALEAFLDARMSNLLENESIDTKVIMCVSGNAAKPFTHTLQVAKALQNMK 567 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI--- 638 + + SAKR+ IL KK + ++ +AE+ L + + Sbjct: 568 ENEDLKTVGESAKRVINIL----KKAEFDAASVNSTLFEHDAERNLLTAVEKTEKELIKY 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +++ K +I LL + FFD V+VN D E+R NRL+LL +++ ++ ++ Sbjct: 624 NKTLTVKDCEEIFALLAGFKGELASFFDSVMVNSDKEEIRKNRLNLLNKTASLLTVIADI 683 Query: 699 QKI 701 K+ Sbjct: 684 TKL 686 >gi|163855083|ref|YP_001629381.1| glycyl-tRNA synthetase beta chain [Bordetella petrii DSM 12804] gi|163258811|emb|CAP41110.1| glycyl-tRNA synthetase beta chain [Bordetella petrii] Length = 712 Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 157/484 (32%), Positives = 245/484 (50%), Gaps = 48/484 (9%) Query: 46 YWTPHRLFLYLKGLSPHSPEK-IEERLGP-RVG--AGKKAIDGFLR---STGLQTISDCQ 98 + TP RL + L + +P++ E+L P +VG A A L+ + GL+ I+ Sbjct: 52 FATPRRLAVRLSQVREQAPDQDYAEKLMPVKVGLDADGNATPALLKKLAAKGLEGIAPAS 111 Query: 99 IKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIR 157 + ++ K D +A P + D L+ + AI +P PK MR+ ++ ++R Sbjct: 112 LARESDGKQDYLVARGTAPGAKLADGLQEGLLAAIDGLPIPKVMRYQLADG-VTTVKFVR 170 Query: 158 PLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAM 216 P ++ + A+ ++ + + G T GHRF A P+ V D Y L E+ Sbjct: 171 PAHGLVALHGAD-----VVSVSALGLSAGRRTLGHRFMADAPVDVADADAYETVLAEQGR 225 Query: 217 VLLDPECRRNAILNDAHRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLC 273 V+ E RR I + A+ +G L D + LL+E+ LVE V++G FD+++L Sbjct: 226 VVASFEARRAEIDSQLQAHAARLGATLGTDPEVAALLDEVTALVEHPTVYVGQFDEQFLQ 285 Query: 274 LPEELIRLTIKTNQKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLED 332 +P+E + LT++ NQK F + G L + F++VSN+ +D IV+GN RVV RL D Sbjct: 286 VPQECLILTMRLNQKYFPLFDPASGKLTHRFLIVSNMH-TDDPVNIVEGNQRVVRPRLAD 344 Query: 333 ALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSR 392 A F F+ D PL R+ +L +V+H K+GTQ ERV R Sbjct: 345 AQFF--------------------FDTDRKTPLAARVQQLG--SIVYHNKLGTQLERVER 382 Query: 393 IRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCC 452 +R + + +A L+ D A DRA +L+KADL T +V EFPELQG +G YA E Sbjct: 383 VRAIARGVAGLLGGDAAAADRAALLAKADLGTNMVGEFPELQGIMGAYYAAGDGEPGDVV 442 Query: 453 DAIEEHLKPRGPLENVPTNKISITVS---LADKLDTLINFWAINEKPSGSKDPYALRRAT 509 A+ E + R + P S+T + +A++ +TL+ W I P+G +DP+ LRRA Sbjct: 443 RALREQYRIR---LDAPVTADSLTAAVLFIAERAETLVGIWGIGLAPTGERDPFGLRRAA 499 Query: 510 LGII 513 LG+I Sbjct: 500 LGLI 503 >gi|145343082|ref|XP_001416295.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576520|gb|ABO94588.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1051 Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 185/734 (25%), Positives = 319/734 (43%), Gaps = 86/734 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D ++E+ +EE+P + + + LLK EG+ + + TP R L +K LS Sbjct: 365 DCVIELGTEELPPQDVTSTSRQFHEAVDALLKAEGLTHAGISVGATPRRFTLSIKALSAG 424 Query: 63 SPEKIEERL-GPRVGAG--------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +EER+ GP + KA GF + G+ + ++KD G+ AV+ Sbjct: 425 Q-ANVEERVRGPPLSRAFEEDGTTPSKAAQGFCKKNGVDAGA---LEKD---GEYVWAVV 477 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K R VL+ +P I + +P++MRW+T +AFS RPL+ + + + Sbjct: 478 KKEGRSAVAVLEEALPKIIAAINFPRAMRWTTNSE--AAFS--RPLRWLFGV-----HGD 528 Query: 174 KIIDLDLKEIPCGNIT--YGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + + + G T R + Y L + ++L E R ++I ++ Sbjct: 529 HHLTFEALGVHSGTTTRLLRTRGDVTDTYSAANAAEYHALLAKDSIVLSFEDRMSSIWSE 588 Query: 232 AHRLASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A A VG E+ + + LLEE+ LVE + MG F++ +L LP+E++ + ++ +Q+ Sbjct: 589 AKAAAKTVGGEIPDSAGEGLLEEVANLVEAPNLVMGDFEEAFLTLPKEVLVMVMRKHQRY 648 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L FI +N G + GN V+ AR EDA F++ Sbjct: 649 FPVEGADGALKPHFITFANGSCDKG--VVKHGNEAVLRARYEDAKFFYE----------- 695 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 DL+KPL + + ++ + F ++G E+ R+ L +A + Sbjct: 696 ---------TDLNKPLAEF--KPELSGITFQQELGNMLEKTQRVEGLVADVAAALGYGPD 744 Query: 410 LVDRAIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +V A V L++ADL T +V E L G +G+ YA + + +AI E PR + Sbjct: 745 VVAPATVAAGLARADLATAMVMELTALAGTMGRHYAQKEGLPANVSEAIFEACLPRSAGD 804 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ ITV++AD+LDTLI +A+ P S DP+ LRRA G+++ I+ + L Sbjct: 805 ALPSTPAGITVAVADRLDTLIGLFAVVGGPKASADPFGLRRAAYGLVQTIVNSGATCDLR 864 Query: 527 QFIE--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 IE + + F RL+ D + + A+L+ + Sbjct: 865 SLIELAAAKQPVEVSNERIEECVTFITRRLEQLFIDAGNDVECVRAVLKERGGSPALASA 924 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQ--ILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 I L A K L + R+ + K L I+ E E+ L+A Sbjct: 925 SISEL-----VAVDGKALETCVRVLSRPTRLVRGKMGANADLRINEASFECEEERALHAA 979 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSLLQY 687 I + + D++ ++CE FFD V V DD E++ NR++L Sbjct: 980 YVAARAKIVDGC------SVTDMISAVCEMDNAATAFFDNVFVMADDAELKRNRMALCAA 1033 Query: 688 IKNIILIVINVQKI 701 + ++ V++ ++ Sbjct: 1034 VASLPSGVLDFAEL 1047 >gi|325923864|ref|ZP_08185468.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] gi|325545651|gb|EGD16901.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] Length = 690 Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 126/409 (30%), Positives = 207/409 (50%), Gaps = 33/409 (8%) Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 D+L I+ AI +P PK MRW +++ RP++ ++ + + +I +L Sbjct: 77 DLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-----GDAVIPAELL 126 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 + +T GHRF + + + Y+ L A VL+D + RR I+ + A G Sbjct: 127 GVRGDRLTRGHRFMHQGEVSLAAPGDYVEALRAAHVLVDADARRARIVEEVEAAAKQAGG 186 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 +D L++++ LVEW + SF++ +L +P+E + T++ NQK F G L Sbjct: 187 SARISEDNLQQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQKFFPVLDAGGKLTE 246 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI ++NI + D A + +G RV+ R DA F F+ DL Sbjct: 247 QFIGIANIVSKDV-AEVAKGYERVIRPRFADAKFF--------------------FDEDL 285 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 + L+ A L V + AK+GT ++V+R+ L + IA + AD RA L+K D Sbjct: 286 KQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEVIAPQVGADPVQARRAAELAKND 343 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L + +V EFPELQG G+ YA E AI+E +PR +++ + + +++A+ Sbjct: 344 LQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDIALSPLGKVLAIAE 403 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L I+ Sbjct: 404 RLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLLDLIK 452 >gi|271965733|ref|YP_003339929.1| glycine--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270508908|gb|ACZ87186.1| Glycine--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 1024 Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 187/731 (25%), Positives = 322/731 (44%), Gaps = 86/731 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 + EI +EE+PA + A + + L + + +R Y TP R+ ++ + P Sbjct: 331 LVFEIGTEELPAGDVTRTAATVRDAVARKLAATRLGHGGIRTYATPRRVVTIVEQVQPRE 390 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ + GPRV G KA GF R + + ++++ G ++ V+R Sbjct: 391 PDSEQTVRGPRVSVAYADDGEPTKAAVGFARG---RQVDVAKLRRIDVDGVAHVGVVRPD 447 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R VL ++ + ++ K+MRW+ S++RPL+ +L +L + Sbjct: 448 PGRDAVAVLSELLGQVVAELRADKNMRWNDPK-----LSFVRPLRWLLALL-----GDVP 497 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + + G T R A ++V S D Y+ L ++LDP RR I+ A RL Sbjct: 498 VPLAVSALAGGTTTRVLRNAAEPSVEVPSADGYLELLAGEGIVLDPAERRTRIVRAAQRL 557 Query: 236 ASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A VG +++ + L++EI LVE G F ++YL LP E++ ++ +Q+ R Sbjct: 558 ARDVGGVVDVEGESALIDEITNLVEEPTPIRGGFAEEYLALPSEILMTVMRKHQRYLPVR 617 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI V+N S + GN V+ AR EDAL FW+ D Sbjct: 618 AADGTLMPYFITVAN--GSCDQEVVGTGNEAVLRARYEDALFFWRAD------------- 662 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-----IDADV 408 LD+S D+ A LD L F +G+ +R RI + + + L +A+ Sbjct: 663 -----LDVSP--DRFRAALDKLS--FAENLGSMADRADRIAAVAQDLGALPMVFMTEAER 713 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA L+K DL + +V E L G + +EYA+ E A+ E +PR + Sbjct: 714 RTLTRAAALAKFDLASHMVVELTSLAGTMAREYALRAGEPEPVAQALHEMEQPRSAGGQL 773 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK-------- 520 P + ++LAD+LD L+ + I P+G DP+ LRRA G++ I+ ++ Sbjct: 774 PRSTPGALLALADRLDLLVGMFGIGSGPTGRSDPFGLRRAASGLVSILRDHTALRSMDVS 833 Query: 521 --------------IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 +D+P + E + F R + L D H + A+L P + Sbjct: 834 ACLAVAAEHLRARAVDVPATTLDEIRE---FVTRRYEQQLLDSGQDHRYVAAVL-PLAGS 889 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + + L++ + + + + R+ +I+ + S + P E Sbjct: 890 PARADETLAELHKRAKAPDFAELVAALLRVRRIVPAGTAAGYDASRLVEP------CELS 943 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+ V+ + T + E R D ++ P+ FFD+VLV +D + R RL LL Sbjct: 944 LHQVLGEVRTALGEQ--PTRLRDFVDTAAALVGPVNTFFDEVLVMDEDADRRATRLGLLA 1001 Query: 687 YIKNIILIVIN 697 +I+++ V++ Sbjct: 1002 HIRDLSAGVLD 1012 >gi|307299163|ref|ZP_07578964.1| glycyl-tRNA synthetase, beta subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306914959|gb|EFN45345.1| glycyl-tRNA synthetase, beta subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 678 Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 187/712 (26%), Positives = 334/712 (46%), Gaps = 77/712 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLE+ EE+P+ L + L + Y + + R + + G+ Sbjct: 7 LLEVGIEELPSSEVQGIKTQLKERIERSLDNNRLGYGELEVFVASRRFGVLIHGIELKQS 66 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-K 117 + +E++ GP + G +A+ GFLR + Q + D ++ Y+ V R+ Sbjct: 67 DFVEKKKGPSEKIAYKEGEPTRALLGFLRGSNAQ-LEDVSVEGG------YVYVQREIIG 119 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 ++ E++L I +++ + + K MRW + + RP+K I +L E I+D Sbjct: 120 KMAEELLPQIFSESLRSLEFKKPMRWGD-----GTYRFARPVKWITAMLDTE-----ILD 169 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++L N + GHRF ++V S ++Y +++ +A+V+ R L++ R+ S Sbjct: 170 MELFGKRSSNKSRGHRFFFDE-VEV-SPENYFQNMRDALVIARESDREERTLSEIRRIES 227 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + ++ D++LL E++ L E+ +G+F +KYL LP E+I +TIK +Q+ F +EG Sbjct: 228 DIHSQIPVDQELLAEVVSLTEYPTAVLGNFMEKYLSLPPEVIIVTIKHHQRTFPV-YKEG 286 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F+ + A D I G V+ ARLEDA ++++D+ Sbjct: 287 KLTNNFVAFQDGPA-DPLGNIRLGYEEVINARLEDAFFYFEKDKE--------------- 330 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRA 414 +P +Q + L ++F +GT ++ R L +I++ + A ++ V+R Sbjct: 331 -----RPFEQYVDGLQ--GILFQRGLGTLRDKTERTTALSSEISRRLKAKSDELFEVERT 383 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+KAD T +V+EFPELQG +G+ YA E IEEH R L VPT Sbjct: 384 ALLAKADQITRVVQEFPELQGIMGRIYAEASGEKSGVALGIEEHY--RDIL--VPTTLTG 439 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--LENKIDI--------- 523 V ++D++DTL +AI PS SKDPYALRR I R + L K+D+ Sbjct: 440 AVVGVSDRIDTLAGNFAIGNIPSASKDPYALRRKASFIFRTMHHLGWKLDLLELLERALN 499 Query: 524 PLSQFIED--QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 L++ E+ +L FF R + +L +R ++ ++ L V + ++E+ Sbjct: 500 NLNKTSEETLDSLKDFFSSRYEAFLLERGFSMNIARSVKMWWRFPYLG-VRAAEAISEYV 558 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + L++ +R+ I + + S + S + +AE+ L + E+ Sbjct: 559 KNEDFNDLLIAYQRVHNI----SRGHSGNSFDGSK--FIEQAERDLLNNYLKCFDDVMEA 612 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + + LL S+ I+ +FD V V + ++R NRL L+ + + L Sbjct: 613 LERDDFEKSLQLLTSLKPHIDRYFDDVFVMAEQEDIRLNRLGFLKSVDQLFL 664 >gi|159903545|ref|YP_001550889.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9211] gi|159888721|gb|ABX08935.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9211] Length = 720 Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 205/761 (26%), Positives = 344/761 (45%), Gaps = 124/761 (16%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+P A L I++ L ++ + + + TP R+ L + L Sbjct: 1 MSTFLLEIGTEEMPPEFARLAPSQLHEIVVNDLAQKRLSHGRVICTSTPRRISLIISDLL 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + E+R GP G +A GF + + D ++++ K VY +L Sbjct: 61 DRAEDFSEDRKGPPSTQAFINGVPSQAAIGFAKKYQILP-EDLEVRETSKGAFVYAKILE 119 Query: 115 K--PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K P +L +VP + +V + MRW + + S RP++ I+C+L +E Sbjct: 120 KGLPA---SQLLVDLVPSWVNRVQGNRFMRWGSGETRFS-----RPIRWIVCLLDSEKLP 171 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRR----NAI 228 +I D I NI+ HR P+ + S + Y+ L VL+ E R+ + I Sbjct: 172 ITLIGTD-PLIISDNISRPHRLFD-QPVTISSPNKYLELLRSVGVLVVREERQKLINSLI 229 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 N ++ L + L L DLL E+ +VE+ + SF + +L LP E++ +K +Q+ Sbjct: 230 QNASNELKANPDLSL----DLLNELTDIVEFPSLVKCSFSESFLRLPPEVLTTVMKVHQR 285 Query: 289 CF-----------VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFW 337 + E +L F+ +SN S G I QGN RV+ AR DA F Sbjct: 286 YIPLYLKNIEIDPLALVSEKILHPSFLCISN-GLSAGENTIRQGNERVLKARFADARFF- 343 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 +LDLS P QR +L V F + +G+ +RV RI L Sbjct: 344 -------------------IDLDLSIPSIQRNDQLKR--VTFASGLGSLYDRVERIVWLS 382 Query: 398 KKIAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 K++ +++ +D + RA L K DL +++V EFPELQG IG +Y + + E + Sbjct: 383 NKLSTILNISKSDSLHLTRAAQLCKHDLVSQMVGEFPELQGLIGGKYLLSEGEPRDVALS 442 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 + EH PR +++P + I +++ DKL+ L++ +A E+P+GS DPYALRR+ G+++ Sbjct: 443 VLEHYMPRSSNDDLPQSHIGSLLAILDKLELLVSIFAKGERPTGSSDPYALRRSANGVLQ 502 Query: 515 IILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHD 554 I+ I + + Q + L FF R+ L + + D Sbjct: 503 ILWNKSISLDVYQMLNLSVSYWRELFPNFNFNSHQLLNELTSFFRLRIISLLEESGVDSD 562 Query: 555 LIEAI----------LRPENDNLLTIVDLIKHLNEFFSSA--KGEKFLLS-AKRI----- 596 +++AI LR ND L+ K L S+ G +F+++ AKR+ Sbjct: 563 IVQAIAGESISIERLLRDPNDILVRA----KVLTNLRSTGDLSGVQFVVTRAKRLADKGT 618 Query: 597 --FQILAIEEKKNREISLEISPQYLLLEAEKRL--YAVISDFGTHIQESMDHKRYHQIGD 652 IL+ + + + E + + +L+ +L +A+ + RY Q+ Sbjct: 619 LPLDILSASDVVDTSL-FEKNSESEMLDVVNKLEPFAICTS----------STRYEQLAT 667 Query: 653 LLHSICEPIEIFFD---QVLVNVDDREVRDNRLSLLQYIKN 690 L + + FFD VLV ++ +R+NRL+LL ++N Sbjct: 668 GLKDGKQSLSNFFDGEQSVLVMTENIPLRNNRLNLLSILRN 708 >gi|242091660|ref|XP_002436320.1| hypothetical protein SORBIDRAFT_10g000400 [Sorghum bicolor] gi|241914543|gb|EER87687.1| hypothetical protein SORBIDRAFT_10g000400 [Sorghum bicolor] Length = 1034 Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 179/713 (25%), Positives = 319/713 (44%), Gaps = 112/713 (15%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P +A E L L+ L++ + + + Y TP RL + ++ LS Sbjct: 396 FVLEIGTEELPPGDVVEATEQLEKSLVNTLEKRRLTHGKVHTYGTPRRLAIVVENLSMKQ 455 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E E GP V G KA +GF R + D ++ K + A +R+ Sbjct: 456 TEVEFELRGPPVAKAFDEEGNPTKAAEGFCRKNNVSV--DHLYRRIDGKTEYIYARVRES 513 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++VL +P + + +PKSMRW++ +A S++R ++ ++ ++ KEK++ Sbjct: 514 ARFADEVLAEDIPTIVSGISFPKSMRWNSNVE--TAESYLRSVEKAGILINMQERKEKVL 571 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 HA + VL A Sbjct: 572 ------------------HA------------------STVL-----------------A 578 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 VG + V LL+E+I LVE +G +D +L LP++++ ++ +QK F ++ Sbjct: 579 EGVGGDFVAPDSLLQEVINLVEAPVPILGRYDDSFLELPKDVLITVMQKHQKYFAVISKS 638 Query: 297 -GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+N S+ + +GN V+ AR EDA F+K Sbjct: 639 TGDLLPYFIAVANGAISE--EVVRKGNEAVLRARYEDANFFYK----------------- 679 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVD 412 +D K + +L ++FH K+GT ++++R+ ++A ++ + ++++ Sbjct: 680 ---MDTQKKFSEFRGQLS--GILFHEKLGTMLDKMTRLENTVAELALILGINERMISIIK 734 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T IV EF L G + + YA+ +A+ E PR + P Sbjct: 735 DAAALAMSDLATSIVTEFTSLAGIMARHYALRDGIPEEIAEALFEITLPRSSGDVFPRTD 794 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS------ 526 I +++AD+LD+L+ + +PS + DP+ LRR + G+++I++ENK L Sbjct: 795 AGIVLAVADRLDSLVGLFGAGCQPSSTNDPFGLRRVSYGLVQILVENKKSFDLRRALTLL 854 Query: 527 ---QFIEDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 Q IE + ++ F RL+ L D + +++ ++L + + Sbjct: 855 AGVQPIEIETNVIDEAVQFVTRRLEQLLVDEGVNCEIVRSVLMERANCPYLAAQTATEME 914 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + K + + R +I+ K E +LE+ P + EK L++ + I Sbjct: 915 AFSRTETFPKVVEAYSRPTRII---RGKEIESALEVDPSVFEKDEEKVLWSAYLEVADKI 971 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +D K + LL +P+E FF+ V V V+D VR+NRL+LL+ I+++ Sbjct: 972 HPGVDIKTFADASLLL---IQPLEDFFNSVFVMVEDERVRNNRLALLRKIESL 1021 >gi|124514351|gb|EAY55864.1| Glycyl-tRNA synthetase, beta subunit [Leptospirillum rubarum] Length = 739 Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 198/726 (27%), Positives = 311/726 (42%), Gaps = 97/726 (13%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EE+PA + E + + L ++ + + R + TP RL L L+ L Sbjct: 21 LLEIGCEELPAGVLPSLREAMEVRARSLRQDFRLGPGSARVFGTPSRLILLLENLPEEQA 80 Query: 65 EKIEERLGPRVGAGKKAID-------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-P 116 E GP D GF RS G+ I + +I+K P+ YLAV + Sbjct: 81 PFRETVFGPPARLAGTLPDAPSPQALGFARSQGV-AIQEIRIEKTPR--GEYLAVDKTLE 137 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R DVL + P + +P PK+MRW + P +RP+ ++ + + Sbjct: 138 ARKTSDVLLELFPQTLDNLPLPKTMRWGSGEGPF-----LRPVLWVVAFW-----GNQPL 187 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND---AH 233 D+ + + G T RF P V+ + HY+ LEE + DP R I D + Sbjct: 188 DVRIAGVLSGTTTRSPRFTGFLPRPVRGISHYVTLLEEWGIEADPVKRGEKIEKDLDLSL 247 Query: 234 RLAS-----AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 R+ A G+ D L EE+ LVE +V GSF + YL LP ELI+ ++ +Q+ Sbjct: 248 RMEQDVGKIAPGVVRRPDAGLTEEVRDLVESYRVIAGSFPEHYLDLPPELIQTVLRVHQR 307 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNL 347 +V +G L+N F+ +S +D A +VQ G +VV ARLEDA ++ RD+ Sbjct: 308 FYVLEKPDGTLSNRFLAISGNPGAD--ANLVQAGFEKVVRARLEDAQYYLNRDR------ 359 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL-GKKIAQLIDA 406 ++PL ++ LD +VF +GT +++ R L G + + + Sbjct: 360 --------------ARPLSSYISDLD--GMVFFPGVGTLSDKIRMARELSGWILEHVPEK 403 Query: 407 DVAL-----------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD-- 453 +V+ +D L+KADL T +VREF EL+G IG Y + ++ I D Sbjct: 404 EVSATGLSRGEMAESLDSLCALAKADLATGLVREFTELEGVIGASYWLAEHREILSRDGK 463 Query: 454 ----------AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPY 503 AI EH +PR + +P +SL DK+ + A P+GS DPY Sbjct: 464 EARRIHLESAAIREHYRPRHAQDVLPETLPGRILSLVDKVLHQVGALAAGFVPTGSMDPY 523 Query: 504 ALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-----------FFHDRLKLYLHDRDIR 552 ALRRA G+I ++ E I LS + ++ F+ +RL Y +R+ Sbjct: 524 ALRRAANGMIALLRETGWPIGLSAMLAKTRTLVPGKDPSADLEKFWKERLVSYW-EREYP 582 Query: 553 HDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 L+ L ++ + + L E + + R+ IL+ E +R + Sbjct: 583 STLVRIALVDFSETVWRTGSRLAFLKEALGRPEAPSLVALHTRLSNILSGE---DRGPTP 639 Query: 613 EISPQYLLLEAEKRLYAVISDF----GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 P AEK L+ + GT E + + I +P+ F+ V Sbjct: 640 RPDPTLFQQSAEKDLFRLAEKAGLLDGTGWSEKALNGDWEGIWKASLVFVDPVGTLFETV 699 Query: 669 LVNVDD 674 +VN D Sbjct: 700 MVNDPD 705 >gi|302552599|ref|ZP_07304941.1| glycyl-tRNA synthetase, beta subunit [Streptomyces viridochromogenes DSM 40736] gi|302470217|gb|EFL33310.1| glycyl-tRNA synthetase, beta subunit [Streptomyces viridochromogenes DSM 40736] Length = 1009 Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 193/737 (26%), Positives = 333/737 (45%), Gaps = 102/737 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE+P E + + L + + + + TP R+ + ++ + P Sbjct: 328 LLFEIGVEELPYADVPATTEAVRESVTAKLADTRLGHGAITVMATPRRIVITVENVQPRE 387 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-KP 116 + + GP+V GA A+ GF RS G +D ++ KG Y++V R + Sbjct: 388 RDTVRTVRGPKVAAAYKDGAPTAALLGFARSQGADP-ADVRVVD--VKGVEYVSVTRHEE 444 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL ++ + + ++MRWS P +FS RP++ +L +L + Sbjct: 445 GRPAVEVLSDLLAEVVSGLRAGRNMRWS---DPGLSFS--RPVRWLLALL-----GRTPL 494 Query: 177 DLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + G+ T HR AP+P ++V + + Y L +LLD + RR A++ A Sbjct: 495 PVVVSSLTAGDTTRVHR-QAPYPEVRVTAAEGYPHFLHMHGILLDRDARRGAVVRGALEA 553 Query: 236 ASAVGLEL-VEDK-DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+ VG + VED+ L++EI ++E+ GSFD++YL LP ++ ++ +Q+ Sbjct: 554 AAEVGGRIDVEDQAGLIDEITDILEFPYAVRGSFDERYLELPASVLTTVMRKHQRYLPVM 613 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 E ++ + F+ +N D + GN V+ AR EDA FW+ D LK + Sbjct: 614 DGERLMPH-FVTFANALCDDD--VVRAGNEAVLRARYEDAAFFWRAD---------LKVT 661 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG---KKIAQLIDADVAL 410 +F L K + F ++GT +R RI VL + A L + V + Sbjct: 662 PAEFRRRLDK-------------LTFEDRLGTVADRAERIAVLALDLTRRAGLAEETVDV 708 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA L+K DL +++V EF L G + +EYA E+ +A+ E PR +PT Sbjct: 709 VRRAGALAKFDLASQMVIEFSGLAGVMAEEYARRAGESPEVAEALAEMELPRSAGGALPT 768 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------------- 516 +SLAD+ D + + I +P+GS DPY +RRA +G++ ++ Sbjct: 769 GDAGAVMSLADRFDLVTGMFLIGAEPTGSSDPYGVRRAAIGLLNVLRTAPAVAGLRVSDG 828 Query: 517 --------LENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAIL----RPEN 564 +++P + L+ R + L D H L++A+L RP Sbjct: 829 LRAAAVRYAAQGVEVPAERVAAAAELVT---RRYEQQLTDAGHEHRLVQAVLGWADRPAY 885 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-PQYLLLEA 623 + T+ L +H+ + E + +R+ +IL E +E + P L A Sbjct: 886 GD-RTLATLERHIG----TEAFEALAAAFQRVVRILP-------EGGVEAADPSLLTAPA 933 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLH---SICEPIEIFFDQVLVNVDDREVRDN 680 E RL ++ +++++ H R +G L+ + E I +FFD+VLV D VR Sbjct: 934 ELRL----AESAEAVRQAL-HGREDDLGALIEVSGPLVEAIGVFFDEVLVMDPDPAVRAA 988 Query: 681 RLSLLQYIKNIILIVIN 697 RL+LL + + ++ Sbjct: 989 RLALLTEVAGLARTTLD 1005 >gi|317402364|gb|EFV82937.1| glycyl-tRNA synthetase subunit beta [Achromobacter xylosoxidans C54] Length = 712 Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 192/713 (26%), Positives = 328/713 (46%), Gaps = 109/713 (15%) Query: 46 YWTPHRLFLYLKGLSPHSPEKI-EERLGP------RVGAGKKAIDGFLRSTGLQTISDCQ 98 Y TP RL + L + +P++ E+L P G A+ L + GL+ I Sbjct: 52 YATPRRLAVRLSAVLAQAPDQAYAEKLMPVKIGLTEDGKATPALQKKLAAKGLENIDLAT 111 Query: 99 IKKDP-KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIR 157 ++++ K D +A P + L+ + AI +P PK MR+ + ++R Sbjct: 112 LERESDGKQDYLVARGTAPGAALAVGLQEGIDAAIDGLPIPKVMRYQLADGETT-VKFVR 170 Query: 158 PLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAM 216 P ++ + A+ ++ + + G T GHR+ + I + D Y L E+ Sbjct: 171 PAHGLIALFGAD-----VVPVTALGLTAGRETLGHRYMSSGAIAIADADAYAATLAEKGR 225 Query: 217 VLLDPECRRNAI----LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYL 272 V+ E RR+ I L+ A RL++ +G + E LL+E+ LVE V++G F++++L Sbjct: 226 VVASFEGRRDEIQRQLLDHAGRLSATLGDD-PEVAALLDEVTALVEHPTVYVGEFEEQFL 284 Query: 273 CLPEELIRLTIKTNQKCF-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 +P+E + LT++ NQK F + G L + F++VSN++ +D IV+GN RVV RL Sbjct: 285 QVPQECLILTMRLNQKYFPLFDPASGRLTHRFLIVSNMR-TDNPVNIVEGNQRVVRPRLA 343 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F++ D+ PL R+ +L +V+H K+GTQ ERV Sbjct: 344 DAQFFFETDRKT--------------------PLAARVEQLG--SIVYHNKLGTQLERVE 381 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R+R + + +A + DVA DRA +L+KADL + +V EFPELQG +G YA E S Sbjct: 382 RVRSIARDVAGKLGGDVAAADRAALLAKADLGSNMVGEFPELQGIMGAYYAAGDGEPDSV 441 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVS---LADKLDTLINFWAINEKPSGSKDPYALRRA 508 A+ + R + P ++ +T + +A++ +TL+ WAI P+G +DP+ LRRA Sbjct: 442 VQALRTQYRNR---YDTPVSQDDLTAATLFIAERAETLVGIWAIGLAPTGERDPFGLRRA 498 Query: 509 TLGIIR-----------------------IILENKIDIPLSQFIEDQ--NLILFFHDRLK 543 LG+I ++ P + D + F ++R + Sbjct: 499 ALGLISAFEQLAAGGWLKLNQDGPLSLDGLLAATAATFPAGKIPADTLAEVRAFIYERYR 558 Query: 544 LYL---HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 L HDR+ +I A+ P L + + ++ + F + + KRI +L Sbjct: 559 NQLINEHDRNAVEAVI-ALAPP----LHQVGERVRAASAFAQMPEAASLAAANKRIGNLL 613 Query: 601 AIEEKKNREI--SLEISP---------QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 E + + + + P L +AE +L A DF +++ Sbjct: 614 KKAEGEIGAVNDAALVEPAEKALAAAIAALRPQAEAQLAA--GDFAANLRT--------- 662 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L EP++ FF ++V +D VR NRL+LL + ++ V ++ ++ Sbjct: 663 ----LAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 711 >gi|58698040|ref|ZP_00372964.1| glycyl-tRNA synthetase, beta subunit, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58535397|gb|EAL59472.1| glycyl-tRNA synthetase, beta subunit, putative [Wolbachia endosymbiont of Drosophila ananassae] Length = 462 Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 154/473 (32%), Positives = 237/473 (50%), Gaps = 58/473 (12%) Query: 253 IIGLVEWVQVFMGSFDK-KYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQA 311 + GL+EW V G ++ K LP+E+I + T QK G + F+ V N+ Sbjct: 1 MTGLIEWPIVLFGEVNQEKSFGLPKEVILSIVNTQQKYLALSN--GKRISHFVTVVNVNN 58 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 +V+G+ R++ ARL DA +D+ KE+ LD + + Sbjct: 59 ----GEVVKGHERILEARLADAQFLISQDK---------KEN-----------LDYYVKK 94 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLSKADLCTEIVREF 430 L ++FHA +G+ GE+V RI L K IA I A + V+RA L+KADL T IVREF Sbjct: 95 LG--SILFHASLGSVGEKVKRITALSKYIAIFIPHASLIKVERAAYLAKADLATSIVREF 152 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G YA E+ +AI EH KP GP + P + +I VS+ADK+D+L+ Sbjct: 153 PELQGVMGGYYASYFQEDREIVEAITEHYKPIGPEQECPKSPSAIAVSIADKVDSLVGLI 212 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-----------SQFIEDQN------ 533 A EK SGS D + LRR T+GIIR ILEN + IP+ S+ + ++N Sbjct: 213 AAGEKISGSYDQFGLRRMTIGIIRTILENNLHIPIRLMIDKSVSLYSRLLFNKNTTSVDK 272 Query: 534 ---------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDN-LLTIVDLIKHLNEFFSS 583 + F +R K+ L +RDIR D++++IL N LLT L+ + S Sbjct: 273 PNRKQISELVFRFCLERFKVILKNRDIRQDIVDSILYKIGINDLLTAEKQTVILDRYLSM 332 Query: 584 AKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 +GE+ L + KR+ +++ + + S ++L+ E L +I++++ Sbjct: 333 PEGEQILSTYKRVSNMMSKVRKSDGTTYSASYGKRFLIENEEIALSNCAITACKNIKQAI 392 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + ++ D L I F D V +N D ++R NRLSLL+ + +I +V Sbjct: 393 KNNHFNAALDELAGFAPFINQFMDSVKINCDSDKLRRNRLSLLENVVSIFHLV 445 >gi|308801046|ref|XP_003075304.1| putative aminoacyl-t-RNA synthetase (ISS) [Ostreococcus tauri] gi|116061858|emb|CAL52576.1| putative aminoacyl-t-RNA synthetase (ISS) [Ostreococcus tauri] Length = 950 Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 187/737 (25%), Positives = 328/737 (44%), Gaps = 92/737 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + AA L + L G+ ++ + TP R + +K LSP Sbjct: 264 DCLIELGTEELPPQDVASAARQLFDAVDAALAAAGLTHEGVCVGSTPRRFAIDIKALSPG 323 Query: 63 SPEKIEERL-GPRVGAG--------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ +EER+ GP + KA GF + G+ + +++D GD AV+ Sbjct: 324 QPD-VEERVRGPPLSRAFEDDGVTPSKAAMGFCKKNGVDASA---LERD---GDYVWAVV 376 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K R VL+ ++P I + +P++MRW+ +AFS RPL+ ++ + Sbjct: 377 KKEGRSASAVLEDVLPKIIAGITFPRTMRWAANSE--AAFS--RPLRWLVGA-----HGD 427 Query: 174 KIIDLDLKEIPCGNITYGHRFHAP----HPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + + + G T R H + + H + LE+ ++++ E R + I Sbjct: 428 RHLAFEALGVHSGTTTRLLRTRGDVTDVHTVANAAAYHAL--LEKEGIVVNFEDRMSRIW 485 Query: 230 NDAHRLASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 +DA A +VG ++ E + LLEE+ LVE V G FD+ +L LP+E++ + ++ +Q Sbjct: 486 SDARAAAKSVGGDVPESSREGLLEEVANLVEAPTVITGDFDEAFLSLPKEVLVMVMRKHQ 545 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F +G L F+ +N +G + GN V+ AR EDA F++ D Sbjct: 546 RYFPVENADGSLKPHFVTFANGPCDEG--VVKHGNESVLRARYEDAKFFYESD------- 596 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 LK+ F +LS + F ++G E+ R+ L +A ++ D Sbjct: 597 --LKKKLADFKPELSG-------------ITFQQELGNMLEKTRRVEGLVSDVAAVLGYD 641 Query: 408 VALVDRAIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 A+V A L++ADL + +V E L G +G+ YA + +AI E PR Sbjct: 642 SAVVATATHAAGLARADLASSMVMELTALAGTMGRHYAREEGLPADVSEAIFEACLPRSA 701 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI--------- 515 + +P ITV++ D+LDTL+ +A+ P S DP+ LRRA G+++ Sbjct: 702 GDLLPKTPAGITVAVTDRLDTLVGLFAVVGGPKASADPFGLRRAAYGLVQTLVASGATCD 761 Query: 516 ------ILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I K +P+S D+ + F RL+ D + + A+L+ +N Sbjct: 762 MRSLVEIAATKQPVPVSNERVDE-CVTFITRRLEQLFIDAGNDVERVRAVLKERGNNPAL 820 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQ--ILAIEEKKNREISLEISPQYLLLEAEKRL 627 + L + EK L + R+ + K L I+ + E+ L Sbjct: 821 ASASVAQL-----VSADEKSLETCMRVLSRPTRLVRGKMEDGTDLTINEASFECDEERAL 875 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICE---PIEIFFDQVLVNVDDREVRDNRLSL 684 +A I E + DL+ ++CE FFD+V V +D E++ NR+++ Sbjct: 876 HAAYVAARAKITEGC------SVTDLIAAVCEMDDASTAFFDKVFVMAEDPELKRNRVAM 929 Query: 685 LQYIKNIILIVINVQKI 701 + + V++ ++ Sbjct: 930 CAAVARLPAGVLDFGEL 946 >gi|194476741|ref|YP_002048920.1| putative Glycyl-tRNA synthetase, beta subunit [Paulinella chromatophora] gi|171191748|gb|ACB42710.1| putative Glycyl-tRNA synthetase, beta subunit [Paulinella chromatophora] Length = 718 Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 202/768 (26%), Positives = 355/768 (46%), Gaps = 117/768 (15%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI +EE+PA A L ++ L+ + Y+++R TP RL + + L Sbjct: 1 MSNFLLEIGTEELPAEFARLALPQLEYLICRDLQIHRINYEDLRVTSTPRRLIVQISNLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ EER GP G A+ GF + G++ IS+ +I++ KG A + Sbjct: 61 SSQPDLEEERKGPPAFQAMMKGELGPAMLGFAKRCGVE-ISNLEIRQT-NKGSFVFAHVS 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++LK +P I + + MRW S RP++ ++ + E Sbjct: 119 QPGQKTIELLKQCIPTWIGGLQGRRFMRWGEQEQKFS-----RPVRWLVALFDKE----- 168 Query: 175 IIDLDLK----EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 II++ L+ E+ G IT GHR +++ + Y + V++D R A++ Sbjct: 169 IINITLENTSPEVKSGRITRGHRLSTKQ-LQIGNASSYDAIMNRGQVIVD-RIVRAALIA 226 Query: 231 DAHRLAS-AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A LA+ + ++L E++ LVE ++ G+ ++YL LP E++ ++ +Q+ Sbjct: 227 EAINLATLNIQARAGISEELFTELVDLVEQPKLIQGAIAERYLRLPPEVLSTVMRIHQRY 286 Query: 290 F-----------VTRTREGVLANCFILVSN--IQASDGGAAIVQGNSRVVAARLEDALHF 336 + L FIL+SN +A++ I GN RV+ ARL DA F Sbjct: 287 IPLYSVDTEIDPLALNSSNALLPQFILISNGNFEATE---TIRYGNERVLKARLADAEFF 343 Query: 337 WKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI--- 393 ++DLS +R+ +L + + F +G+ ER R+ Sbjct: 344 --------------------LDVDLSTASVERLRKLAL--ITFAEGLGSLKERSDRLVWI 381 Query: 394 -RVLGKKIAQLIDADVAL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 ++L K I L++A +A +A L+K DL +++V EFPELQG +G +Y + + E Sbjct: 382 TQLLTKYI--LVEASIAKDACKAASLAKHDLASQMVFEFPELQGIMGGKYLLAEGEKREV 439 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A+ EH PR + +P+ + V+LA++L+ L++ +A E+PSGS DPYALRRA G Sbjct: 440 ALAVLEHYMPRCAGDVLPSTEAGSIVALAERLELLLSIFAKGERPSGSSDPYALRRAGNG 499 Query: 512 IIRIILENKIDIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDI 551 I++I+ I +S+ ++ Q L R+ L + + Sbjct: 500 ILQILWHRNWSIDISEILQKTSEHWSHLFPAFQVKPKQLTQELSDLLRQRIISQLSEEGV 559 Query: 552 RHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 DLI+A+ ++D I + K+L+S ++ +++ I+ R Sbjct: 560 DIDLIQAVAGETTSTAQLLIDPIDVRSRL-------KYLISLRKQNRLVPIQAMVQRAAH 612 Query: 612 LE---------ISPQYLLLEAEKRLYAVISDFG-THIQESM----DHKRYHQIGDLLHSI 657 L I P+ +L+ S+ ++ ES+ ++ Y Q+ D+L Sbjct: 613 LADKAVLKPNVIDPKGAF---NSKLFESPSEVALANLIESLYPLAKNRLYSQLSDVLSQG 669 Query: 658 CEPIEIFFD---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +E FFD V+V D+ E+R+NRL+LL + N I+ + K++ Sbjct: 670 VNILETFFDGEESVMVMNDNLEIRNNRLNLLAILHNQANILADFSKLI 717 >gi|254432216|ref|ZP_05045919.1| glycyl-tRNA synthetase, beta subunit [Cyanobium sp. PCC 7001] gi|197626669|gb|EDY39228.1| glycyl-tRNA synthetase, beta subunit [Cyanobium sp. PCC 7001] Length = 725 Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 205/760 (26%), Positives = 341/760 (44%), Gaps = 106/760 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA A L ++ L E+ + + ++ TP RL + + GL Sbjct: 8 FLLEIGTEELPADFARLALPQLEALVAASLAEQRLEHGDLDCTSTPRRLAVTVPGLPSRQ 67 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ EER GP R G A GF + G+ + +I+ PK VY AVLR+P Sbjct: 68 QDREEERKGPPAAQAFRDGTPTGAALGFAKRCGV-AVDQLEIRDTPKGPFVY-AVLREPG 125 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +VL +++P IQ++ + MRW S RP++ ++ +L E ++ Sbjct: 126 RGAAEVLASLIPGWIQQLQGRRFMRWGEGECRFS-----RPVRWLVALL-----DEAVVP 175 Query: 178 LDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + L + G + GHR P+ + S Y LE A V + RR+ I Sbjct: 176 VVLPGTDPVVASGRHSRGHRLET-RPVVIPSAAQYADTLEAAGVTVSRRRRRDRIQTSIA 234 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF--- 290 A A + LLEE+ LVE + G+ + YL LP E++ ++++Q+ Sbjct: 235 AAAEARDARPDLPEALLEELTDLVEQPLLIEGAMEHTYLDLPAEVLGTVMRSHQRYVPLY 294 Query: 291 --------VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + GVL F+ +SN + + +GN RV+ ARL DA F D+ Sbjct: 295 QSDAQVDPLAPAARGVLQPGFLCISNGR-EQAWETVRRGNERVLRARLADARFFVTADR- 352 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK---K 399 ++S+ DQ +AR V F +G+ +RV R+ + Sbjct: 353 ---AVASIDRR------------DQ-LAR-----VTFAEGLGSLRDRVERMEWCTDVLLE 391 Query: 400 IAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 + L + RA L K DL +++V EFPELQG +G +Y + + E A+ EH Sbjct: 392 VLPLPEEAAGHARRATHLCKHDLVSQMVGEFPELQGVMGAKYLLAEGEPRHVALAVLEHY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 PRG + +P ++ V+LA++L+ L++ +A E+PSGS DPYALRRA G+++I+ Sbjct: 452 LPRGAGDALPESEAGAVVALAERLELLLSIFAKGERPSGSSDPYALRRAGNGLLQILWAR 511 Query: 520 KI--------------------DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAI 559 + D+ +S + +L F RL L + + DL+ A+ Sbjct: 512 EWRLDLDALLQRCSLHWATLLPDLEVSAGLLRGDLAEFLCQRLASLLEEEGLEPDLVAAV 571 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA-KRIFQILAIEEKKNREISL----EI 614 P L L++ + + LL+A +R ++ A++ R L + Sbjct: 572 AGPS----LPRARLLRDPGDV----RQRGLLLAALRREGRLAAVQAVVTRAARLAEKGAL 623 Query: 615 SPQYLLLEA--EKRLYAVISDFG--------THIQESMDHKRYHQIGDLLHSICEPIEIF 664 SP L +A + RL+ S+ G T + S + Y+ + L E + F Sbjct: 624 SPDVLSPDAVVDARLFEKGSEAGMLAVLERLTPLAASCSSEGYNALASALEDSAEALGAF 683 Query: 665 FD---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FD V+V +D VR NRL++L ++N ++ + +++ Sbjct: 684 FDGDGSVMVMAEDAAVRTNRLAMLGVLRNQAAVLADFRQL 723 >gi|86739982|ref|YP_480382.1| glycine--tRNA ligase [Frankia sp. CcI3] gi|86566844|gb|ABD10653.1| glycyl-tRNA synthetase beta chain [Frankia sp. CcI3] Length = 1017 Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 191/745 (25%), Positives = 333/745 (44%), Gaps = 93/745 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI +EE+PA + E + L+ L + + +R TP R+ + ++P Sbjct: 311 LLFEIGTEELPAAEVTRTVEAVRAGLVERLAATRLTHGAVRVLGTPRRIVAIVDEVAPRE 370 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRS-----TGLQTISDCQIKKDPKKGDVYLA 111 P+ GPRV GA KA GF R GLQ ++ +G ++A Sbjct: 371 PDVERVVRGPRVSAAYDAAGAPTKAAVGFARGQGADPAGLQVVT--------HRGVEHVA 422 Query: 112 VLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 ++R + R VL ++ + + ++MRW + P +FS RP++ +L +L Sbjct: 423 LVRTEAGRDAARVLAGVLGELVVGLRAERNMRW---NDPTLSFS--RPVRWLLALL---- 473 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E ++ + + + G T GHR P+ V S Y L +LLDP RR ++ Sbjct: 474 -GETVVPVTVSTLAAGRTTRGHRRAGSPPLDVPSASGYPELLAARSILLDPVVRRELVVE 532 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +A +L + G ++LV + D+L E+ LVE+ +GSF++++L LP E++ ++ +Q+ Sbjct: 533 EAAKLTADSGGHIDLVAEADVLTEVANLVEFPCPILGSFEERFLDLPAEILTTVMRKHQR 592 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 R G L F+ V++ + A + GN V+ AR DA F Sbjct: 593 YLPVRDAAGRLLPSFVAVADGKVDQ--ALVRAGNEDVIRARFTDAAFF------------ 638 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-- 406 ++ D++ PL+ A L L F ++G+ +R RI L + +A+ ID Sbjct: 639 --------YDADITVPLETFRAELAKL--TFEQRLGSVADRADRIAALARDLAEEIDLGE 688 Query: 407 -DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D A +DRA L+K DL T++V E L G + +EYA E + A+ E PR Sbjct: 689 DDRATLDRAAALAKFDLATQMVIELSSLAGTMAREYARRAGEPEAVAVALFEMELPRRAG 748 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK----- 520 + +P ++LAD+LD L+ +A++ P+GS DP+ LRRA LG+ I+ Sbjct: 749 DQLPDTAPGGLLALADRLDLLVGLFALDAAPTGSSDPFGLRRAALGVAAILGSRPELAGL 808 Query: 521 ------------IDIPLS-QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAI----LRPE 563 +P+S + +E F R L D + H L+ A+ P Sbjct: 809 TVTGALARAARLTPVPVSAEALEAAE--TFVRGRYVQQLLDTGVDHRLVGAVGPLTGTPA 866 Query: 564 N--DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL-----AIEEKKNREISLEISP 616 L+T+ L++ E +A + +R+ +I+ A+ + + EI Sbjct: 867 RAAATLVTLRQLVQ--GESAPAAGFAALAAALQRVRRIVPAGTPAVLDAQRLTEPAEIDL 924 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 ++ +RL + +D + + ++ + ++ FFD V+V DD Sbjct: 925 LEVVTALVRRLASSGADSAVTAETAAGAISLDELVVAAGDLPAAVDAFFDAVMVMADDPA 984 Query: 677 VRDNRLSLLQYIKNIILIVINVQKI 701 VR RL LL +I+++ ++ + + Sbjct: 985 VRAARLGLLAWIRDLTTGALDWEAL 1009 >gi|157363331|ref|YP_001470098.1| glycyl-tRNA synthetase, beta subunit [Thermotoga lettingae TMO] gi|157313935|gb|ABV33034.1| glycyl-tRNA synthetase, beta subunit [Thermotoga lettingae TMO] Length = 671 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 189/719 (26%), Positives = 334/719 (46%), Gaps = 77/719 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EE+PA + + L ++ L E+ + ++ + T R+ + +K ++ Sbjct: 6 LLEIGIEELPASEMSQIQQQLQLLTEKLFTEKRLAFRTVLSVVTNRRMAVLVKEIAERQE 65 Query: 65 EKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PK 117 + I E+ GP G KA+ GFL S + D +K D Y+ + +K P Sbjct: 66 DSILEKRGPSKSTAFLDGKPTKALIGFL-SANEASEEDIYLK------DEYVYIRKKVPG 118 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +VL I IQ + + KSMRW + ++RP+K ++ +L +I+ Sbjct: 119 RKASEVLPEIFTEVIQSLKFTKSMRWGN-----GKYLFVRPVKWVVLML-----NNQILP 168 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + N T GH + I V++ YI L+ VL++ E R I + ++ Sbjct: 169 FQIFGKNSSNKTQGHP-NLQKVITVENCADYIDLLKNHYVLVNQEERIEKIKAELAKIEK 227 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 L DK+L+++I L+EW +G F ++YL LPEELI +T+K + F T + Sbjct: 228 EHFLTCDRDKELIKKISNLLEWPTAIVGKFKEEYLNLPEELITVTVKHHLSAFTTFENQK 287 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 + + N I G S VV ARLEDA ++++ D+ ++ Sbjct: 288 ITPYFVAFIDN--PFGNIEKITIGYSNVVNARLEDARYYFEIDK--------------RY 331 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAI 415 NL+ ++R+ + VF ++GT ++V RI+ L +A+ + + RA Sbjct: 332 NLE---DFNERLKGM-----VFQKELGTLFDKVLRIKKLSLYMAEKLGLSQMAEKIGRAA 383 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSKAD+ + +V EFPELQG IGK YA++ E+ +AIEE P Sbjct: 384 ILSKADIASHVVYEFPELQGTIGKLYALMNEEDAEVAEAIEEQYFDE------PKTITGS 437 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 +++AD++DT+I A+ PSGS+DP+ LR + I + I+ K D+ L + I + + Sbjct: 438 IIAIADRIDTIIGNLAVGNIPSGSRDPFGLRNKSDVIFKTIVNRKWDLDLEELIRETLKL 497 Query: 536 L-----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 L F +R +L +DL A+ + L + + L E + Sbjct: 498 LSITCKWEIISDFMSNRYYAFLSGEGFNYDLSRAVNHLWSKPLRGFLS-ARALAEMVKNN 556 Query: 585 KGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + +R+ I + K E + + LL R V S + ++E +D Sbjct: 557 SFNELCVGFERVHNITKNFNDTKFDGALFEENAEIELL---NRFIEVKSTVVSSLKE-LD 612 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++R + L+ ++ I+ +FD V V V+ ++R NRL+ L+ I + +++ ++ +++ Sbjct: 613 YER--GVSSLI-TLKPFIDKYFDDVFVMVNREDIRKNRLAFLKNIDELFMMIGDLTQLI 668 >gi|206602766|gb|EDZ39247.1| Glycyl-tRNA synthetase, beta subunit [Leptospirillum sp. Group II '5-way CG'] Length = 739 Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 198/726 (27%), Positives = 310/726 (42%), Gaps = 97/726 (13%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLE+ EE+PA + E + I L ++ + + R TP RL L L+ L Sbjct: 21 LLEVGCEELPAGVLPALREAMEIRARSLRQDFRLGPGSARVLGTPSRLILLLENLPEEQA 80 Query: 65 EKIEERLGPRVGAGKKAID-------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 E GP D GF RS G+ ++ + +I+K P+ YLAV + + Sbjct: 81 PFRETVFGPPARLAGTLPDAPSPQALGFARSQGV-SVQEIRIEKTPR--GEYLAVDKTLE 137 Query: 118 -RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R DVL + P + +P PK+MRW + P +RP+ ++ + + Sbjct: 138 IRKTSDVLSELFPQTLDNLPLPKTMRWGSGEGPF-----LRPVLWVMAFW-----GDLPL 187 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND---AH 233 D+ + + G T RF P V+ + HY LEE + DP R I D A Sbjct: 188 DVRVAGVLSGTTTRSPRFSGFLPRPVRGISHYATLLEEWGIEADPVKRGEKIEKDLDLAL 247 Query: 234 RLASAVGLELV-----EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 R+ VG L D L +E+ LVE +V GSF + YL LP ELI+ ++ +Q+ Sbjct: 248 RMEQDVGKILPGVVRRPDAGLTDEVRDLVESYRVIAGSFPEHYLDLPPELIQTVLRVHQR 307 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNL 347 +V +G L+ F+ +S +D A++VQ G +VV ARLEDA ++ RD+ Sbjct: 308 FYVLEKPDGTLSCRFLAISGNPNAD--ASLVQAGFEKVVRARLEDAQYYLNRDR------ 359 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI------- 400 ++PL ++ LD +VF +GT +++ R L I Sbjct: 360 --------------ARPLSSYVSDLD--GMVFFPGVGTLSDKIRMARELSGWILEHVPEK 403 Query: 401 ----AQLIDADVA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD-- 453 + L ++A +D L+KADL T +VREF EL+G IG Y + ++ I D Sbjct: 404 EVSASGLSRGEMAESLDSLCALAKADLATGLVREFTELEGVIGASYWLAEHREILSRDGK 463 Query: 454 ----------AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPY 503 AI EH +PR + +P +SL DK+ + A P+GS DPY Sbjct: 464 DARRIRLESAAIREHYRPRHAQDVLPETLPGRILSLVDKVLHQVGGLAGGFVPTGSMDPY 523 Query: 504 ALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-----------FFHDRLKLYLHDRDIR 552 ALRRA G+I ++ E I LS + ++ F+ +RL Y +R+ Sbjct: 524 ALRRAANGMIALLRETGWPIGLSAMLAKARTLVPGKDPSADLEKFWKERLVSYW-EREYP 582 Query: 553 HDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 L+ L ++ + + L E + + R+ IL+ E + +L Sbjct: 583 STLVRMALVDFSETVWRTGSRLAFLKEALERPEAPSLVALHTRLSNILSGEGSGS---TL 639 Query: 613 EISPQYLLLEAEKRLYAVISDFG----THIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 P AEK L+ + G T E + + I +P+ F+ V Sbjct: 640 RPDPTLFQQSAEKDLFRLAEKAGLLEDTGWTEKAQNGDWEGIWKASLVFVDPVGTLFETV 699 Query: 669 LVNVDD 674 +VN D Sbjct: 700 MVNDPD 705 >gi|113955371|ref|YP_730489.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. CC9311] gi|113882722|gb|ABI47680.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9311] Length = 719 Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 198/746 (26%), Positives = 335/746 (44%), Gaps = 103/746 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA H A + L +++ LK + + +R TP RL + ++ L Sbjct: 5 FLLEIGTEELPAEFVHSALKQLQQMVVSDLKHLRLSHGQVRVSGTPRRLAVVVESLIDRQ 64 Query: 64 PEKIEERLGPRVGAGKKA-IDGFLRSTGLQTISDCQI------KKDPKKGDVYLAVLRKP 116 P+ EER GP V K+A +DG L C + +D KG A + P Sbjct: 65 PDLEEERKGPPV---KQALVDGIPGPAALGFAKRCGVDPAELQSRDTSKGPCLFARVCTP 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +L +P I + + MRW S RP++ ++ + +E +I Sbjct: 122 GDATTTLLIDRIPAWINGLQGRRFMRWGDGDQRFS-----RPVRWLVSLYGSE-----LI 171 Query: 177 DLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + L + G ++ HR +++Q D Y L +A V++D R + I + Sbjct: 172 PVTLSAATPPVQSGRLSRSHRLR-DSTVEIQHADGYCDALAKAGVMVDRSQREHLIRSAL 230 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A A + + L EE++ LVE +V G YL LP E+I ++++Q+ +V Sbjct: 231 ETEAQACSASVDCPESLFEELVDLVEAPRVLSGEIADCYLDLPPEVIVTVMQSHQR-YVP 289 Query: 293 RTREGV------------LANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 RE L + F+LVSN + ++D A IV+GN RV+ ARL DA F Sbjct: 290 LKRENAHHDPLALQARDALLSRFLLVSNGLDSAD--ATIVRGNERVLGARLADAEFFLNV 347 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRIRVLGK 398 D+ + AR D LD V F +G+ +R R+ + + Sbjct: 348 DRKSASE-----------------------ARRDALDRVTFAKGLGSLRDRCDRMSWMTE 384 Query: 399 KI--AQLIDADVAL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 ++ + I +++A+ RA K DL +++V EFPELQG IG +Y + + E+ A+ Sbjct: 385 RLIDSLSITSEIAIHAKRAAHFCKHDLVSQMVGEFPELQGLIGGKYLLEEGEDRQVALAV 444 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 EH +PRG + +P++ ++L+++L+ L++ +A ++PSGS DPYALRRA GI++I Sbjct: 445 AEHYQPRGAGDALPSSDAGALLALSERLELLLSIYAKGDRPSGSSDPYALRRAGNGIVQI 504 Query: 516 ILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDL 555 + + + L + + +L L R+ + DL Sbjct: 505 LWDRGWRLSLQSLLSNAARYWAELFPSFAVQPEVLVADLSLLLRQRMVSQFEEDGFPADL 564 Query: 556 IEAILRPENDNLLTIVDLI--KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 ++A+ + + D + + + ++ L + + + Q A +K S + Sbjct: 565 VQAVAGEAVGDARLLSDPVDARERLALLHQLRRDERLQAVQAVVQRAAKLAEKGDLGSDQ 624 Query: 614 ISP----QYLLLE--AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD- 666 ++P Q L E +E L + D Q Y Q+ + L + +E FFD Sbjct: 625 LTPSGVVQPDLFESASEASLLQSLDDLSPLAQSG----NYIQLAEGLQDAAKALEAFFDG 680 Query: 667 --QVLVNVDDREVRDNRLSLLQYIKN 690 V+V D+ +VR NRL+LL +KN Sbjct: 681 PNSVMVMTDNLDVRRNRLNLLGVLKN 706 >gi|257464111|ref|ZP_05628494.1| glycyl-tRNA synthetase beta chain [Fusobacterium sp. D12] gi|317061628|ref|ZP_07926113.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D12] gi|313687304|gb|EFS24139.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D12] Length = 524 Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 157/542 (28%), Positives = 273/542 (50%), Gaps = 62/542 (11%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L EI EE PAR A DL I K E + + + Y TP RL L + ++ Sbjct: 4 LFEIGMEENPARFLEAALADLKKNFIQKCKAERISHGEVNIYGTPRRLILCAEDVAEQQE 63 Query: 65 EKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK- 117 + E +GP G +A GF +S G++ + I+ D KG+ Y+A + K Sbjct: 64 DLNELNIGPAKSIAFLNGEITRAGIGFAKSQGIEPVDLEIIQTD--KGE-YIAARKALKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +L ++ + ++ +PKSM+WS + RP++ L + A ++++ Sbjct: 121 QATKLLLPELLKSLVLELSFPKSMKWSDLK-----IRFARPIEWFLAM-----ADSEVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA-HRLA 236 +++ + N + GHRF +V S++ Y + E V++D E R+ I + ++A Sbjct: 171 FEIEGMKSSNRSKGHRFFGKE-FEVASVEDYFIKIRENNVIIDIEERKKMIREEILSKIA 229 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++V ++ LL E+ LVE+ +GSF+ +L +P+E++ ++++ +Q+ F + Sbjct: 230 EDE--QVVIEEGLLAEVTNLVEYPYPIVGSFNSDFLEVPQEVLIISMEVHQRYFPILDKH 287 Query: 297 GVLANCFILVSN-IQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+++ N I+ SD + GN +V++ARL DA F+K D N Sbjct: 288 GKLLPKFVVIRNGIEDSDN---VRIGNEKVLSARLADARFFYKEDLRN------------ 332 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL----- 410 PL+ + +L VVF +G+ +++ RI ++I + + + + L Sbjct: 333 --------PLEHNVEKLK--HVVFQKDLGSIYQKIIRI----QEICEFLLSKLQLEEKRE 378 Query: 411 -VDRAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V R L+KADL + ++ +EF +LQG +G +YA+ E I EH PR + Sbjct: 379 TVLRTAYLAKADLVSNMIGEKEFTKLQGFMGADYALKFGEKEEVSKGIREHYYPRFQGDE 438 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P I V +AD+LDTL+ + + PSGSKDP+ALRRA LGI+ IIL ++++I L Sbjct: 439 LPQGTEGILVGIADRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNIILHSELEISLRD 498 Query: 528 FI 529 + Sbjct: 499 LV 500 >gi|269302737|gb|ACZ32837.1| glycyl-tRNA synthetase (GlyRS) [Chlamydophila pneumoniae LPCoLN] Length = 1010 Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 189/726 (26%), Positives = 328/726 (45%), Gaps = 91/726 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI SEE+PA + L + +L + ++Y+ + +P RL L +K ++P Sbjct: 316 DLLLEIGSEELPATFVPIGIQQLESLARQVLTDHNIVYEGLEVLGSPRRLALLVKNIAPE 375 Query: 63 SPEKIEERLGPRVGA-----GKKAIDG--FLRSTGL-----QTIS-DCQIKKDPKKGDVY 109 +K E+ GP + + G + G F S G+ Q +S + G Y Sbjct: 376 VVQKAFEKKGPMLTSLFSPNGDVSPQGQQFFASQGVDISHYQDLSRHASLAIRTVNGSEY 435 Query: 110 LAVLRKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 L +L RL D+L +P+ IQ++ +PK M W S + RP++ ++ + Sbjct: 436 LFLLHPEVRLRTADILMQELPLLIQRMKFPKKMVWDN-----SGVEYARPIRWLVALY-- 488 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E I+ + L I ++GHR P I + S Y+ L +A V++ + RR I Sbjct: 489 ---GEHILPITLGTIIASRNSFGHRQLDPREISISSPQDYVETLRQACVVVSQKERR-MI 544 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + R S+ + + L+EE L E V G F +++ LP+EL+ + +QK Sbjct: 545 IEQGLRAHSSDTISAIPLPRLIEEATFLSEHPFVSCGQFSEQFCALPKELLIAEMVNHQK 604 Query: 289 CFVTR-TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F T T G ++N FI+V + +D I++GN + + RL D +K+ Sbjct: 605 YFPTHETSSGAISNFFIVVCDNSPND---TIIEGNEKALTPRLTDGEFLFKQ-------- 653 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 DL PL + +L V + +G+ ++V R++ + + A Sbjct: 654 ------------DLQTPLTTFIEKLK--SVTYFEALGSLYDKVERLKAHQRVFSTFSSLA 699 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y N + A+ EHL+ + Sbjct: 700 ASKDLDIAIQYCKADLVSAVVNEFPELQGIMGEYYLKHANLPTASAVAVGEHLRHITMGQ 759 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + T I +SL D+LD L+ + + KP+ S DPYALRR +L ++ ++ +++ I L+ Sbjct: 760 KLST--IGTLLSLLDRLDNLLACFILGLKPTSSHDPYALRRQSLEVLTLVSASRLPIDLA 817 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPEND 565 ++ ++ F RLK ++ + R D I A+L Sbjct: 818 SLLDRLADHFPSTIEEKVWDKSKTIHEILEFIWGRLKTFMGSLEFRKDEIAAVLIDSATK 877 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLL---SAKRIFQILAIEEKKNREISLEISPQYLLLE 622 N + I+D + L + EK + + R+ +IL+ + ++S+ SP +L + Sbjct: 878 NPIEILDTAEAL-QLLKEEHTEKLAVITTTHNRLKKILS-----SLKLSMTSSPIEVLGD 931 Query: 623 AEKRLYAVISDFGTHIQESMDH---KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 E V+ F +E+ H + + + DL + I + F + V + DD +R+ Sbjct: 932 RESNFKQVLDAFPEFPKETSAHAFLEYFLSLADLSNDIQD----FLNTVHIASDDGAIRN 987 Query: 680 NRLSLL 685 R+SLL Sbjct: 988 LRISLL 993 >gi|303282639|ref|XP_003060611.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458082|gb|EEH55380.1| predicted protein [Micromonas pusilla CCMP1545] Length = 963 Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 184/729 (25%), Positives = 322/729 (44%), Gaps = 81/729 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF +EI +EE+PA A+ L + L+ G+ + + TP R+ + + L+ Sbjct: 277 DFFVEIGTEELPAADVTTGAKQLLNAVKACLETAGLKHDGVTYGATPRRMVVRVANLAAS 336 Query: 63 SPEKIEERLGPRVGAG--------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 K E GP + KA GF + G + ++KD G+ A ++ Sbjct: 337 QESKEERNRGPPLSRAFEEDGTTPTKAALGFCKKNG---VDPADLEKD---GEYIWANVK 390 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + DVLK +P + + +PK+MRW++ S FS RPL+ +L + E Sbjct: 391 TTGKAAVDVLKEALPGMVSSINFPKTMRWNSE----STFS--RPLRWLLAM-----HGEH 439 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + +P G+ T R A ++V+ H+ L + +D E RR I + A Sbjct: 440 HVPFTALNVPSGSTTRLLRNSATPVVEVKDSAHHASALAADTIEIDFEARREMIWSTAGE 499 Query: 235 LASAVG----LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA+ VG E L++E++ L+E +G+FD +L LP+E++ + ++ +Q+ F Sbjct: 500 LAAGVGGVVPASSGEPGGLIDEVVNLIESPTPILGNFDAAFLSLPKEVLVMVMRKHQRYF 559 Query: 291 -VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 V G L F+ V+N A+ GN V+ AR +DA F Sbjct: 560 PVENAETGDLLPHFVTVANGAVDPD--AVRHGNECVLKARYDDAQFF------------- 604 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---A 406 + D SK L +L+ + F ++GT E+ R+ L +A+ + A Sbjct: 605 -------YEADTSKSLADFKPKLE--GITFQTELGTMLEKTERVEKLAPTLARALGFSDA 655 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D + A L++ADL T++V+EF L G +GK YA + CDAI E PR + Sbjct: 656 DAKVAAEAAALARADLATQLVQEFTSLAGVMGKHYATREGLPAPLCDAIFEAALPRSSGD 715 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +PT+ + V++AD+LDTL+ +A+ P + DP+ LRRA G ++ ++ + + L Sbjct: 716 LLPTSNAGVAVAVADRLDTLVGLFAVVGAPKATADPFGLRRAAYGAVQALVSSNVRCDLR 775 Query: 527 QFIED--------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +++ + + RL+ +L D +++ A L + Sbjct: 776 AALKEAAALQPVTCGDDVVTECLEYVTRRLEQFLVDDGCGAEVVRAALAERGGDPALAAT 835 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L F G++ + + + + K LE+ + E E L+ Sbjct: 836 TARALETFVG---GDELKAAIAVLARPTRLVRGKELPEDLEVKRESFAEEEETALWDAYE 892 Query: 633 DFGTHIQESMDHKRYHQIGDLLHS---ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I + K + DLL + + EP E FFD+V V ++ E+R NRL+L+ + Sbjct: 893 KAAAKIGD----KSTASVEDLLSAAALLVEPSEAFFDKVFVMAEEPELRRNRLALVNAVA 948 Query: 690 NIILIVINV 698 ++ V+++ Sbjct: 949 SLPNGVVDL 957 >gi|116515026|ref|YP_802655.1| hypothetical protein BCc_085 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256880|gb|ABJ90562.1| glycyl-tRNA synthetase, b subunit [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 646 Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 140/509 (27%), Positives = 249/509 (48%), Gaps = 80/509 (15%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI +E++P++ A I +KE + Y+ + ++T +L L + L Sbjct: 7 LIEIQTEDLPSKELKNIANFFYYIFKKKIKENKIQYKKISLFFTSKKLVLKVFSL----- 61 Query: 65 EKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL-IEDV 123 K+ KK +L + K K + +++ Sbjct: 62 ------------------------------------KNIKKKKNHLIYIHKKKTISLKEK 85 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 +K IV I+K+P +SM W + + RP+++I+ +L +KII ++ I Sbjct: 86 IKKIVFETIKKIPLKRSMLWDE-----KSIRFSRPIRNIMILL-----NKKIIKAKIEGI 135 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHRLASAVGLE 242 +I+YGH +P I + Y + + ++LD + R+ I+ L + Sbjct: 136 TSNSISYGHFLMSPKKIIFHHANQYTKKFFKKKKIILDYQERKKKIIKQIKNLTKKHNKK 195 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VTRTREGVLAN 301 + +K+LL+EI +EW +G F KKYL +P+E++ I+ NQK F + T++ + N Sbjct: 196 IYINKNLLKEISVSIEWPIAHIGKFKKKYLNIPQEILIYIIENNQKYFSIFNTKKNTITN 255 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI +SNI+ + I+Q N +V++++L++ F K+D +KF+ Sbjct: 256 YFIFISNIETPNF-KKIIQENEQVLSSKLKNINFFLKKDL------------LIKFS--- 299 Query: 362 SKPLDQRMARLDML-DVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 RLD+L ++ F K+G+ E+ RI+ + + I++++ + RA +LSK Sbjct: 300 --------NRLDLLKNISFQKKLGSMYEKTIRIKKISQYISKILKVKKKSIKRAAILSKC 351 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T I+R LQG IG YA+ +E+ AI+EH P N+PT IS +S++ Sbjct: 352 DLTTNIIRS-TTLQGIIGMYYALYNHEDREIALAIKEHYLPNFSQSNLPTQLISCILSIS 410 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRAT 509 DK+DT+ ++I++ P +KDP+ALRR+T Sbjct: 411 DKIDTITGIFSISKVPKNNKDPFALRRST 439 >gi|15618855|ref|NP_225141.1| glycyl tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|4377270|gb|AAD19084.1| Glycyl tRNA Synthetase [Chlamydophila pneumoniae CWL029] Length = 1014 Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 189/726 (26%), Positives = 328/726 (45%), Gaps = 91/726 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI SEE+PA + L + +L + ++Y+ + +P RL L +K ++P Sbjct: 320 DLLLEIGSEELPATFVPIGIQQLESLARQVLTDHNIVYEGLEVLGSPRRLALLVKNVAPE 379 Query: 63 SPEKIEERLGPRVGA-----GKKAIDG--FLRSTGL-----QTIS-DCQIKKDPKKGDVY 109 +K E+ GP + + G + G F S G+ Q +S + G Y Sbjct: 380 VVQKAFEKKGPMLTSLFSPDGDVSPQGQQFFASQGVDISHYQDLSRHASLAIRTVNGSEY 439 Query: 110 LAVLRKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 L +L RL D+L +P+ IQ++ +PK M W S + RP++ ++ + Sbjct: 440 LFLLHPEIRLRTADILMQELPLLIQRMKFPKKMVWDN-----SGVEYARPIRWLVALY-- 492 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E I+ + L I ++GHR P I + S Y+ L +A V++ + RR I Sbjct: 493 ---GEHILPITLGTIIASRNSFGHRQLDPRKISISSPQDYVETLRQACVVVSQKERR-MI 548 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + R S+ + + L+EE L E V G F +++ LP+EL+ + +QK Sbjct: 549 IEQGLRAHSSDTISAIPLPRLIEEATFLSEHPFVSCGQFSEQFCALPKELLIAEMVNHQK 608 Query: 289 CFVTR-TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F T T G ++N FI+V + +D I++GN + + RL D +K+D Sbjct: 609 YFPTHETSSGAISNFFIVVCDNSPND---TIIEGNEKALTPRLTDGEFLFKQD------- 658 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++V R++ + + A Sbjct: 659 -------------LQTPLTTFIEKLK--SVTYFEALGSLYDKVERLKAHQRVFSTFSSLA 703 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y N + A+ EHL+ + Sbjct: 704 ASEDLDIAIQYCKADLVSAVVNEFPELQGIMGEYYLKHANLPTASAVAVGEHLRHITMGQ 763 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + T I +SL D+LD L+ + + KP+ S DPYALRR +L ++ ++ +++ I L+ Sbjct: 764 KLST--IGTLLSLLDRLDNLLACFILGLKPTSSHDPYALRRQSLEVLTLVSASRLPIDLA 821 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPEND 565 ++ ++ F RLK ++ + R D I A+L Sbjct: 822 SLLDRLADHFPSTIEEKVWDKSKTIHEILEFIWGRLKTFMGSLEFRKDEIAAVLIDSATK 881 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLL---SAKRIFQILAIEEKKNREISLEISPQYLLLE 622 N + I+D + L + EK + + R+ +IL+ + ++S+ SP +L + Sbjct: 882 NPIEILDTAEAL-QLLKEEHTEKLAVITTTHNRLKKILS-----SLKLSMTSSPIEVLGD 935 Query: 623 AEKRLYAVISDFGTHIQESMDH---KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 E V+ F +E+ H + + + DL + I + F + V + DD +R+ Sbjct: 936 RESNFKQVLDAFPGFPKETSAHAFLEYFLSLADLSNDIQD----FLNTVHIANDDGAIRN 991 Query: 680 NRLSLL 685 R+SLL Sbjct: 992 LRISLL 997 >gi|15836479|ref|NP_301003.1| glycyl tRNA synthetase [Chlamydophila pneumoniae J138] gi|8979320|dbj|BAA99154.1| glycyl tRNA synthetase [Chlamydophila pneumoniae J138] Length = 1014 Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 189/726 (26%), Positives = 328/726 (45%), Gaps = 91/726 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI SEE+PA + L + +L + ++Y+ + +P RL L +K ++P Sbjct: 320 DLLLEIGSEELPATFVPIGIQQLESLARQVLTDHNIVYEGLEVLGSPRRLALLVKNVAPE 379 Query: 63 SPEKIEERLGPRVGA-----GKKAIDG--FLRSTGL-----QTIS-DCQIKKDPKKGDVY 109 +K E+ GP + + G + G F S G+ Q +S + G Y Sbjct: 380 VVQKAFEKKGPMLTSLFSPDGDVSPQGQQFFASQGVDISHYQDLSRHASLAIRTVNGSEY 439 Query: 110 LAVLRKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 L +L RL D+L +P+ IQ++ +PK M W S + RP++ ++ + Sbjct: 440 LFLLHPEIRLRTADILMQELPLLIQRMKFPKKMVWDN-----SGVEYARPIRWLVALY-- 492 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E I+ + L I ++GHR P I + S Y+ L +A V++ + RR I Sbjct: 493 ---GEHILPITLGTIIASRNSFGHRQLDPRKISISSPQDYVETLRQACVVVSQKERR-MI 548 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + R S+ + + L+EE L E V G F +++ LP+EL+ + +QK Sbjct: 549 IEQGLRAHSSDTISAIPLPRLIEEATFLSEHPFVSCGQFSEQFCALPKELLIAEMVNHQK 608 Query: 289 CFVTR-TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F T T G ++N FI+V + +D I++GN + + RL D +K+D Sbjct: 609 YFPTHETSSGAISNFFIVVCDNSPND---TIIEGNEKALTPRLTDGEFLFKQD------- 658 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++V R++ + + A Sbjct: 659 -------------LQTPLTTFIEKLK--SVTYFEALGSLYDKVERLKAHQRVFSTFSSLA 703 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y N + A+ EHL+ + Sbjct: 704 ASEDLDIAIQYCKADLVSAVVNEFPELQGIMGEYYLKHANLPTASAVAVGEHLRHITMGQ 763 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + T I +SL D+LD L+ + + KP+ S DPYALRR +L ++ ++ +++ I L+ Sbjct: 764 KLST--IGTLLSLLDRLDNLLACFILGLKPTSSHDPYALRRQSLEVLTLVSASRLPIDLA 821 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPEND 565 ++ ++ F RLK ++ + R D I A+L Sbjct: 822 SLLDRLADHFPSTIEEKVWDKSKTIHEILEFIWGRLKTFMGSLEFRKDEIAAVLIDSATK 881 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLL---SAKRIFQILAIEEKKNREISLEISPQYLLLE 622 N + I+D + L + EK + + R+ +IL+ + ++S+ SP +L + Sbjct: 882 NPIEILDTAEAL-QLLKEEHTEKLAVITTTHNRLKKILS-----SLKLSMTSSPIEVLGD 935 Query: 623 AEKRLYAVISDFGTHIQESMDH---KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 E V+ F +E+ H + + + DL + I + F + V + DD +R+ Sbjct: 936 RESNFKQVLDAFPGFPKETSAHAFLEYFLSLADLSNDIQD----FLNTVHIANDDGAIRN 991 Query: 680 NRLSLL 685 R+SLL Sbjct: 992 LRISLL 997 >gi|16752084|ref|NP_445450.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydophila pneumoniae AR39] gi|33242312|ref|NP_877253.1| glycyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|12643527|sp|Q9Z6W0|SYG_CHLPN RecName: Full=Glycyl-tRNA synthetase; Short=GlyRS; Includes: RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName: Full=Glycine--tRNA ligase alpha subunit; Includes: RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit gi|7189826|gb|AAF38698.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydophila pneumoniae AR39] gi|33236823|gb|AAP98910.1| glycyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] Length = 1010 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 189/726 (26%), Positives = 328/726 (45%), Gaps = 91/726 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI SEE+PA + L + +L + ++Y+ + +P RL L +K ++P Sbjct: 316 DLLLEIGSEELPATFVPIGIQQLESLARQVLTDHNIVYEGLEVLGSPRRLALLVKNVAPE 375 Query: 63 SPEKIEERLGPRVGA-----GKKAIDG--FLRSTGL-----QTIS-DCQIKKDPKKGDVY 109 +K E+ GP + + G + G F S G+ Q +S + G Y Sbjct: 376 VVQKAFEKKGPMLTSLFSPDGDVSPQGQQFFASQGVDISHYQDLSRHASLAIRTVNGSEY 435 Query: 110 LAVLRKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 L +L RL D+L +P+ IQ++ +PK M W S + RP++ ++ + Sbjct: 436 LFLLHPEIRLRTADILMQELPLLIQRMKFPKKMVWDN-----SGVEYARPIRWLVALY-- 488 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E I+ + L I ++GHR P I + S Y+ L +A V++ + RR I Sbjct: 489 ---GEHILPITLGTIIASRNSFGHRQLDPRKISISSPQDYVETLRQACVVVSQKERR-MI 544 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + R S+ + + L+EE L E V G F +++ LP+EL+ + +QK Sbjct: 545 IEQGLRAHSSDTISAIPLPRLIEEATFLSEHPFVSCGQFSEQFCALPKELLIAEMVNHQK 604 Query: 289 CFVTR-TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 F T T G ++N FI+V + +D I++GN + + RL D +K+D Sbjct: 605 YFPTHETSSGAISNFFIVVCDNSPND---TIIEGNEKALTPRLTDGEFLFKQD------- 654 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 L PL + +L V + +G+ ++V R++ + + A Sbjct: 655 -------------LQTPLTTFIEKLK--SVTYFEALGSLYDKVERLKAHQRVFSTFSSLA 699 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 +D AI KADL + +V EFPELQG +G+ Y N + A+ EHL+ + Sbjct: 700 ASEDLDIAIQYCKADLVSAVVNEFPELQGIMGEYYLKHANLPTASAVAVGEHLRHITMGQ 759 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + T I +SL D+LD L+ + + KP+ S DPYALRR +L ++ ++ +++ I L+ Sbjct: 760 KLST--IGTLLSLLDRLDNLLACFILGLKPTSSHDPYALRRQSLEVLTLVSASRLPIDLA 817 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPEND 565 ++ ++ F RLK ++ + R D I A+L Sbjct: 818 SLLDRLADHFPSTIEEKVWDKSKTIHEILEFIWGRLKTFMGSLEFRKDEIAAVLIDSATK 877 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLL---SAKRIFQILAIEEKKNREISLEISPQYLLLE 622 N + I+D + L + EK + + R+ +IL+ + ++S+ SP +L + Sbjct: 878 NPIEILDTAEAL-QLLKEEHTEKLAVITTTHNRLKKILS-----SLKLSMTSSPIEVLGD 931 Query: 623 AEKRLYAVISDFGTHIQESMDH---KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 E V+ F +E+ H + + + DL + I + F + V + DD +R+ Sbjct: 932 RESNFKQVLDAFPGFPKETSAHAFLEYFLSLADLSNDIQD----FLNTVHIANDDGAIRN 987 Query: 680 NRLSLL 685 R+SLL Sbjct: 988 LRISLL 993 >gi|159488996|ref|XP_001702483.1| predicted protein [Chlamydomonas reinhardtii] gi|158280505|gb|EDP06262.1| predicted protein [Chlamydomonas reinhardtii] Length = 1097 Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 167/625 (26%), Positives = 280/625 (44%), Gaps = 64/625 (10%) Query: 80 KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPK 139 KA++GF R G++ + + + DPK + AV++ R +VL +P + + + K Sbjct: 489 KALEGFCRKNGVEAGAVFK-EADPKGVEYVWAVVKDAGRPAVEVLTDELPALVGGLSFKK 547 Query: 140 SMRWST-THSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH 198 SMRWS T + AFS RPL+ +L + + ++ + G T R A Sbjct: 548 SMRWSPGTGAASPAFS--RPLRWLLAL-----HGDTVLPFVYGTLQAGATTRVLRNAASP 600 Query: 199 PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK---DLLEEIIG 255 + V S + Y+ L A + L R AI D A+ VG +V D DLLEE+ Sbjct: 601 TLPVPSAEAYLPALAAAGISLPGAGRAEAIWRDVTAAAARVG-GVVPDSTRGDLLEEVTN 659 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-VLANCFILVSNIQASDG 314 LVE V MGSF +L LP E++ + ++ +Q+ F T +G L FI V+N Sbjct: 660 LVEAPSVVMGSFSPDFLALPSEVLVMVMRKHQRYFPVFTADGKSLLPHFITVANGPIDP- 718 Query: 315 GAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDM 374 A + GN V+ AR EDA F++ D LK+ F LS Sbjct: 719 -AVVAAGNEAVLRARFEDAAFFYRED---------LKQPLQDFRPKLS------------ 756 Query: 375 LDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV----LSKADLCTEIVREF 430 F ++G+ + R+ L +A V V L KADL T V E Sbjct: 757 -GTTFQKELGSLLAKSDRVEQLVPALAAAAAWASPAVLEVAVQAAHLCKADLATSTVTEM 815 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 L G +G+ YA Q + +A+ E PR + +P++ + V++AD+LD+L+ + Sbjct: 816 TALAGTMGRHYAAKQGLPAAVSEAVFEACLPRQAGDLLPSSPAGVLVAVADRLDSLVGLF 875 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKID---------------IPLSQFIEDQNLI 535 A PS + DP+ALRRA G+++ ++ NK+ IP+S ++ +++ Sbjct: 876 AAGCAPSAATDPFALRRAAYGMLQTLVANKVSVSLKAAVAAAAALQPIPVSAQVQS-DVL 934 Query: 536 LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 + R++ L D +++ A L D+ + ++ L + K + + R Sbjct: 935 AYLGGRMEQLLGDGGAGAEVVRAALAERGDDPALVAATVEQLKA-GEGGRLRKVMAAFSR 993 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 +I + K+ S+ ++ + E E+ L+A S+ + + + + L Sbjct: 994 PTRI--VRGKEVPPASVAVAQELFEGEEERALFAAYSEARAKVTSASTVSEWLAAAEPLL 1051 Query: 656 SICEPIEIFFDQVLVNVDDREVRDN 680 S PI+ FF++V V +D+ VR N Sbjct: 1052 S---PIDKFFEKVFVMCEDQAVRAN 1073 >gi|317969808|ref|ZP_07971198.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. CB0205] Length = 721 Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 199/767 (25%), Positives = 337/767 (43%), Gaps = 114/767 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L + L + Y + TP RL + + LS Sbjct: 1 MSTFLLEIGTEELPADFARLALPQLEQAVKRDLSAARLSYGQVETTSTPRRLVVQVSDLS 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P+ +ER GP + G +A GF + G+ + +++ PK V+ VL Sbjct: 61 ESAPDLRDERKGPPAAQAFKDGVPTQAAIGFAKRCGIDPAA-LEVRDTPKGPFVFAEVL- 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L +P I + + MRW S S RP++ ++ +L +E Sbjct: 119 EAGRPARELLAETIPQWIAALQGRRFMRWGVGESRFS-----RPVRWLVALLGSE----- 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + L + G + GHR ++ + + S D Y L +A V+++ R + I Sbjct: 169 LIPVTLSGSDPVVQSGQTSRGHRLYS-DAVAIPSADAYAAALADAGVVVNRSDRASFIRM 227 Query: 231 DAHRLASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 R SA L+ V D DL EE+ LVE + GS YL LP E++ ++ +Q+ Sbjct: 228 SVER--SAAALDAVPDLPSDLFEELTDLVETPLLIEGSVADHYLALPAEVLSTVMRAHQR 285 Query: 289 C------------FVTRTREGVLANCFILVSN--IQASDGGAAIVQGNSRVVAARLEDAL 334 R+ +LA F+ + N +ASD ++ +GN RV+ ARL DA Sbjct: 286 YVPLYRKDADSDPLALDARKSLLAR-FLCIGNGLAEASD---SVRRGNERVLKARLADAE 341 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F + D+ S+ + LK V F +G+ +RV R+ Sbjct: 342 FFVQADRAVA---SAERRELLK-------------------RVTFAEGLGSLLDRVERLE 379 Query: 395 VLGKKIAQLIDADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 L +A+ ++ + D RA + K DL +++V EFPELQG +G +Y + + E Sbjct: 380 WLTALLAEQLELPNQVADHATRAAHMCKHDLVSQMVGEFPELQGVMGGKYLLAEGEPREV 439 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A+ EH +P+G + +P++ V+LA++ + L++ +A E+P+GS DPYALRRA G Sbjct: 440 ALAVLEHYQPKGAGDALPSSVAGAVVALAERFELLLSIYAKGERPTGSSDPYALRRAGNG 499 Query: 512 IIRIILENKIDIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDI 551 I++I+ + + + +E Q L RL+ L + I Sbjct: 500 ILQILWDQGWSLNIKTLLERATQHWAKLLPHFKVDAAALAQELSELMGQRLQSLLEEAAI 559 Query: 552 RHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 DL++A+ V L + L + + + L S + ++ A++ R Sbjct: 560 DSDLVQAVAG-------ETVSLERLLADPGDARQRASLLQSLRSGGELTAVQAVVTRAAK 612 Query: 612 LEIS---PQYLLLEA---EKRLYAVISDFGT--------HIQESMDHKRYHQIGDLLHSI 657 L PQ +L + + L+ S+ G + D RY Q+ L + Sbjct: 613 LATKGDLPQTVLSASAVVDASLFEKSSEAGMLSVLNSLEPVATGSDPDRYAQLAQGLIAG 672 Query: 658 CEPIEIFF---DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FF D V+V +D +R NRL+LL + N ++ + +I Sbjct: 673 ASALANFFDGEDSVMVMAEDSSIRANRLNLLGVLNNQASVLADFSRI 719 >gi|148242367|ref|YP_001227524.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. RCC307] gi|147850677|emb|CAK28171.1| Glycyl-tRNA synthetase beta subunit [Synechococcus sp. RCC307] Length = 737 Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 200/759 (26%), Positives = 348/759 (45%), Gaps = 105/759 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA + L ++ L E+ + + + TP R+ + + GL+P + Sbjct: 21 FLLEIGTEELPADFAAQVLAQLEPMVRRDLSEKRLACEGLSCTSTPRRIAVCIDGLAPSA 80 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + EER GP G KA GF + GLQ + +I++ PK V+ +VL K Sbjct: 81 SDLQEERKGPPAAQAFQDGMPTKAALGFAQRCGLQP-EELEIRETPKGPFVFASVLEK-G 138 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R D+L ++P I + + MRW S RP++ ++ +L E++++ Sbjct: 139 RQASDLLAELIPGWIAALQGRRFMRWGAGERRFS-----RPIRWLVALL-----DEQVVE 188 Query: 178 LDLK----EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 L L+ + G ++GHR A + + + Y L A V+++ + RR I + Sbjct: 189 LSLEGSDPPVQSGRTSFGHRLVAAE-VSIPAASAYGDCLACAGVMVNRQQRRQLIADAIA 247 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC--FV 291 AS +LLEE+ LVE + G+ D L LP E++ ++++Q+ Sbjct: 248 AAASKRDARADLPDELLEELTDLVERPSLIEGAIDDGSLDLPAEVLSTVMRSHQRYVPLY 307 Query: 292 TRTRE---------GVLANCFILVSNIQASDGGA-AIVQGNSRVVAARLEDALHFWKRDQ 341 R+ E G L F+ ++N DG +I +GN RV+ ARL DA F Sbjct: 308 RRSAEVDPLSLQARGCLLPQFLCIAN--GLDGAEDSIRRGNERVLKARLADAAFF----- 360 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA 401 + D + +QR A+L V F +G+ +R R+ L + + Sbjct: 361 ---------------LDADRAVASEQRRAQLSR--VTFAEGLGSLLDRCERLEWLAQTLG 403 Query: 402 QLIDADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 + + D A R L K DL +++V EFPELQG +G +Y + + E S A++EH Sbjct: 404 RCLALDAAAQADACRGAHLCKHDLVSQMVGEFPELQGLMGGKYLLAEGEPASVALAVQEH 463 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 PRG + +P++ V+LA++L+ L++ +A ++P+GS DPYALRRA GI++I+ E Sbjct: 464 YLPRGADDVLPSSDAGAVVALAERLELLLSIFAKGQRPTGSSDPYALRRAGNGILQILWE 523 Query: 519 NKIDIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEA 558 + + L ++ +L F RL L ++ DL++A Sbjct: 524 RQWRLDLQDLLQQACNHWAELLPGFAIDASQLQADLQEFLRQRLISQLEEQGEAVDLVQA 583 Query: 559 ILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-----EISLE 613 + P++ N L++ + + + L SA + + A+ ++ R +++ + Sbjct: 584 VT-PQSAN----QRLLRDPLDALDRLRLLEQLRSAGELAPVQAVVQRAVRLAEKGDLAAD 638 Query: 614 ISPQYLLLEA-------EKRLYAVISDF-GTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + +++A E + V+ G Q+ D RY ++ + L + + FF Sbjct: 639 VLSSTGVVDASLFEQPSEAAMLKVVDQLSGIVGQQGAD--RYSKLCEALAASSSTLAAFF 696 Query: 666 D---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D V+V DD VR NRL+LL + N ++ + I Sbjct: 697 DGDTSVMVMADDMAVRRNRLNLLAVLGNQAAVLADFAAI 735 >gi|32491343|ref|NP_871597.1| hypothetical protein WGLp594 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166550|dbj|BAC24740.1| glyS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 694 Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 163/567 (28%), Positives = 279/567 (49%), Gaps = 53/567 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P+ +K ++ + L + Y+N++ + RL + + Sbjct: 5 FLIEIGTEELPSYCLNKISKSFCESIKKQLFLSKIEYKNIKWLSSSRRLAVQADLYIYKT 64 Query: 64 PEKIEERLGPRVGAGKK----AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 + GPR+ K + +++ G IS QIK K V+++ K+ Sbjct: 65 KNSYILKKGPRIKNEKDIYNINVKMWIKKFG---ISTKQIKLIKNKKGVWVSYKACNKKY 121 Query: 120 -IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 + + L I+ ++++V PK M+WS + F +IRP+ SI +L + KI D+ Sbjct: 122 NLFNKLFDIIKSSLEEVYVPKKMKWSNYN-----FQFIRPVHSITALLDDKIIPGKIFDI 176 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 ++ G I Y R + ++D+ L+ +++D + R+N I+N+ +L Sbjct: 177 NIDRNLLG-IFYKKR---QKIVLNNAVDYENALLKNFNIIVDYKKRKN-IINEKIKLEEK 231 Query: 239 V--GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF--VTRT 294 G L DK LEEI LVE + G+F K +L +P ++I + QKCF + Sbjct: 232 KFKGKVLKNDK-FLEEITSLVEIPNIISGNFKKSFLKIPVKIIENILCNIQKCFPVYEKN 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++ +L FI V N +G I++ N V+ RL D F K Sbjct: 291 KQNLLPK-FIFVIN-GNKNGVERIIKDNENVINNRLLDVEFFIK---------------- 332 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +DL L R+ +L+ ++FH +G+ E+ RI++L I+ I+ + V RA Sbjct: 333 ----IDLQTKLKDRICKLN--SIIFHDNLGSLKEKTIRIKLLSICISNKINGNYKYVSRA 386 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L K DL T +V EFP QG IG+ Y+ + E+ A EH PR + +PTN S Sbjct: 387 SLLCKCDLTTNMVFEFPTTQGIIGEYYSEINMESKEVSLAQREHYYPRFSKDILPTNLTS 446 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +S+ADKLDT++ + I P+G KDP+ L+R +LGIIRII+E K+ I ++ I D+++ Sbjct: 447 QIISIADKLDTIVGIFGIKLYPTGKKDPFCLKRLSLGIIRIIIEKKLSININHII-DKSI 505 Query: 535 ILFFHDRLKLYLHDRDIRHDLIEAILR 561 L+ L + +++ +++E L+ Sbjct: 506 SLY-----SFKLTNENLKKEVLEFFLK 527 >gi|78212759|ref|YP_381538.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9605] gi|78197218|gb|ABB34983.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9605] Length = 723 Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 192/724 (26%), Positives = 315/724 (43%), Gaps = 90/724 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA +A + L + L+E + + + + TP RL + + L Sbjct: 5 FLLEIGTEELPADFVRQALDQLQQRVGRDLREARLGHGVVSVFGTPRRLVVSVAELEDRQ 64 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P+ EER GP V G A GF + G+ SD + ++D KG A + P Sbjct: 65 PDLQEERKGPPVAQAFKEGVPGPAAIGFAKRCGVDP-SDLE-QRDTPKGPCVFATVLTPG 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPIS-AFSWIRPLKSILCILVAEDAKEKII 176 + ++L+ ++P I + + MRW T S W+ LK I V D + Sbjct: 123 QASVELLQGLIPQWIDALQGRRFMRWGTGAQRFSRPIRWLLALKGSELIPVVLDGADP-- 180 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 E+ + HR H P+ + S + + L A V++D R I + A Sbjct: 181 -----EVRSDRFSRAHRLHGDEPLSIASAEQFGETLAAAGVVVDRAERAKRIRTSLDQSA 235 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR--- 293 A L EE++ LVE ++ G+ +++L LP E+I ++ +Q+ + Sbjct: 236 QAANGTPDCPASLFEELVDLVEDPRILEGTIAERFLQLPPEVISTVMQAHQRYVPLQVPG 295 Query: 294 --------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 T E VL F+LV N A IV+GN RV+ ARL DA F D+ Sbjct: 296 LEADPLRLTAEAVLRPQFLLVGNGLAP-ASTLIVRGNERVLGARLADAEFFLDVDRRQ-- 352 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRIRVLGKKIAQLI 404 +R + LD V F +G+ +R RI L + + + Sbjct: 353 ---------------------SSASRREALDRVTFAEGLGSLLDRSERIERLTGLLLKQL 391 Query: 405 DADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 D ++ D RA K DL +++V EFPELQG +G +Y + + E A+ EH P Sbjct: 392 GLDQSMADAAQRAAHFCKNDLVSQMVGEFPELQGLMGGKYLLEEGETREVALAVVEHYLP 451 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--LEN 519 RG + +P V+LA++L+ L++ +A E+P+GS DPYALRRA G+++I+ + Sbjct: 452 RGAGDALPATPAGAVVALAERLELLLSIFAKGERPTGSSDPYALRRAGNGVVQILWGMAW 511 Query: 520 KIDIP--LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 ++D+ LS+ +E+ +L R+ L D DL++A+ Sbjct: 512 RLDLMAFLSKAVEEWVALFPDFAVDASQLHNDLCQLMRQRIVSQLEDDGFAPDLVQAVAG 571 Query: 562 P--ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEKKNRE-----ISLE 613 + LL+ +K + + L + + + Q A + EK + S Sbjct: 572 DAVSSQRLLSDPLDVKQRIQLLRDLRDSGQLDAVQAVVQRAAKLAEKGDLARDQLVASDV 631 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLV 670 + P+ +EK L+A + +Q + Y + D L + ++ FFD V+V Sbjct: 632 VEPERFESASEKDLFAALE----QLQPMAQQRSYQALADALVAATPALQAFFDGETSVMV 687 Query: 671 NVDD 674 VDD Sbjct: 688 MVDD 691 >gi|33862851|ref|NP_894411.1| putative glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9313] gi|33634767|emb|CAE20753.1| putative Glycyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9313] Length = 721 Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 163/545 (29%), Positives = 273/545 (50%), Gaps = 70/545 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L+EI +EE+PA A L ++ L+ + Y ++ TP RL + ++ L+ Sbjct: 1 MSTLLVEIGTEELPADFARLALPQLEQMVSRDLQGLRLSYGMLQCTSTPRRLVVLVENLA 60 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + E R GP G K A GF + GL+ D +I++ PK V+ VL Sbjct: 61 SATADLEEVRKGPPAGQAFKNGVPTQAAAGFAKRCGLKA-EDLEIRETPKGPFVFATVLE 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +E +L +P I + + MRW S RP++ ++ +L E+ Sbjct: 120 HGRSAME-LLTDQIPEWIGSLQGRRFMRWGEGERRFS-----RPIRWLVALL-----DEQ 168 Query: 175 IIDLDL----KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 II + L EI N++ GHR H + + S + Y++ L + V +D + +R ++ Sbjct: 169 IIPVCLDGSDPEICAANLSRGHRLH-DQAVIIPSAESYVQTLAKVGVEVDRQ-KRGTLIR 226 Query: 231 DAHRLASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A A+A GLE + DL EE+ LVE + G+F K YL LP E++ ++ +Q+ Sbjct: 227 HAIDTAAA-GLEACPNCPDDLFEELTDLVEAPLLLEGTFAKSYLDLPAEVLSTVMRVHQR 285 Query: 289 CFVTRTR------------EGVLANCFILVSN--IQASDGGAAIVQGNSRVVAARLEDAL 334 +V R + L F+ +SN +ASD + +GN RV+ ARL DA Sbjct: 286 -YVPLYRLDAVNDPLALDAKSSLLPRFLCISNGLAKASD---PVRRGNERVLKARLADAE 341 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F + D++ L+S++ R + V F +G+ +RV R+ Sbjct: 342 FFVEADRS----LASIER------------------RKKLAHVTFAEGLGSLLDRVERME 379 Query: 395 VLGKKIAQLID--ADVAL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 L + +L+D A++++ V RA+ L K DL +++V EFPELQG +G +Y + + E Sbjct: 380 WLTDVLVELLDLSAEISVQVRRAVHLCKHDLVSQMVGEFPELQGVMGAKYLLAEGEPREV 439 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A+ EH PRG + +P ++ ++LAD+L+ L++ +A ++PSGS DPYALRRA G Sbjct: 440 ALAVLEHYLPRGAGDALPESESGAVLALADRLELLLSIYAKGDRPSGSSDPYALRRAGNG 499 Query: 512 IIRII 516 +++I+ Sbjct: 500 LLQIL 504 >gi|159040006|ref|YP_001539259.1| glycyl-tRNA synthetase, beta subunit [Salinispora arenicola CNS-205] gi|157918841|gb|ABW00269.1| glycyl-tRNA synthetase, beta subunit [Salinispora arenicola CNS-205] Length = 993 Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 190/732 (25%), Positives = 315/732 (43%), Gaps = 84/732 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 P + E+ EE+P A + + L L + + +R + TP R+ + ++ Sbjct: 312 PLLVFEVGVEEMPPAEARDARQQVENALTARLAAGRLPHGAIRVHATPRRITAIVTDVAD 371 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + GPRV G A GF RS G+ I D G YL V R+ Sbjct: 372 RETDAVTTMRGPRVSVAFKDGTPTPAAQGFARSHGVSAEELATIVVD---GQEYLCVHRE 428 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + L + + + K+MRWS P F+ RP++ +L + Sbjct: 429 EPGRPAVEALAETLSTVVGGLRSAKNMRWS---DPELVFT--RPIRWLLAMW-----GNA 478 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPI-KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + ++ + T HR +A PI V S Y+ L A ++LD RR I++ A Sbjct: 479 PVPVNASRLRADTSTRVHR-NADQPIVPVSSAGAYLPALAAAGIVLDERARRQVIIDAAR 537 Query: 234 RLASAVGLELVEDKD--LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A+ VG + D + LL++I LVE +G FD YL LP+ ++ ++ +Q+ Sbjct: 538 TAAATVGGSIDVDGEAPLLDQITFLVEQPTAILGDFDPGYLGLPDAILTTVMRKHQRYLP 597 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G L F++++N A + GN V+ AR EDA F++ DQ +P +++++ Sbjct: 598 VRDTDGQLLPHFVVIANGVIDR--ATVQAGNEAVLRARFEDAAFFYRADQT-VP-IATMR 653 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +R+ RL D K+G+ R RI L + +A L D++ Sbjct: 654 ---------------KRLHRLTFTD-----KLGSMANRADRIAGLAQALASDVSLKDSER 693 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++RA + K DL +++V E L G +G+EYA+ E A+ E PR + + Sbjct: 694 TTLERAAQIVKFDLGSQMVTEMTSLAGIMGREYALHAGETADVAAAMFEAELPRHADDQL 753 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI------------- 515 P + ++LADKLD+LI A P+ S DP+ALRRA +G I I Sbjct: 754 PHSTPGALLALADKLDSLIGLAATVGLPTSSSDPFALRRAAVGTIAIHRGTPALAGLSLR 813 Query: 516 --ILENKIDIPLSQFIEDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + E P+ E + + F RL+ L D D + A++ D T Sbjct: 814 DALAEAARLQPVPVTSETIDAVSEFVTRRLEQQLLDEGHAVDRVRAVII-HADKPSTADR 872 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 +++ L + +F + +R +I E P L AE L+ +S Sbjct: 873 VLRQLTNLADTPDFRRFAAALQRARRIATTG-------GAEYDPAALTEPAELHLHETVS 925 Query: 633 DFGTHIQESMDHKRYHQIGDLL---HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + E D +GDL+ ++ ++ FD +LV DD +VR RL L+ + Sbjct: 926 KSAGELPEHAD------LGDLVAAGGALPAAVDTSFDGILVMADDPQVRARRLGLVGAVA 979 Query: 690 NIILIVINVQKI 701 + V++ Q + Sbjct: 980 ALGDGVLDWQAL 991 >gi|87124315|ref|ZP_01080164.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9917] gi|86167887|gb|EAQ69145.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9917] Length = 719 Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 206/753 (27%), Positives = 342/753 (45%), Gaps = 95/753 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA A L + G LKE + + ++ TP RL + ++ L Sbjct: 5 FLLEIGTEELPADFARLALPQLKATVTGDLKEWRLNHGAIQVTSTPRRLAVIVENLVERQ 64 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E+R GP V G A GF R G+ S +++ PK V+ VL + + Sbjct: 65 EDLREDRKGPPVAQAYVDGQPGPAALGFARRCGVDP-SALEVRATPKGDCVFATVLVEGQ 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPIS-AFSWIRPLKSILCILVAEDAKEKII 176 + +L+ +P + + + MRW + S W+ L +C+ V A + ++ Sbjct: 124 STLS-LLQERIPGWVDALQGRRFMRWGSGDQRFSRPVRWLVALFGEVCVPVTLAASDPVV 182 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 G + HR + + + Y L A V++D +R I+ A + Sbjct: 183 H-------SGRSSRAHRLF-DRTVDLADAEAYGAALAAAGVVVD-RNKRAEIIRTALKER 233 Query: 237 SAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + V L+ V D L EE++ LVE +V GS +YL LP E+I ++++Q+ +V Sbjct: 234 AEV-LQGVADCPPALFEELVDLVEAPRVLTGSIADRYLALPPEVIITVMQSHQR-YVPLR 291 Query: 295 REGV------------LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 R GV L F+LVSN AS I +GN RV++ARL DA F D+ Sbjct: 292 RPGVCMDPLGLSAREVLCPDFLLVSNGLAS-ADDRIREGNQRVLSARLADAEFFLSVDRR 350 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 SS + AL+ V F +G+ +R RI L ++ + Sbjct: 351 QP---SSARREALQA-------------------VTFAEGLGSLRDRSDRIEHLAGQLLE 388 Query: 403 LIDADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ A + RA L K DL +++V EFPELQG IG +Y + + E+ + A+ EH Sbjct: 389 RLECPQATQEAARRAAHLCKHDLVSQMVGEFPELQGLIGGKYLLEEGESRAVALAVVEHY 448 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PRG + +P++ V+LA++L+ L++ +A E+PSGS DPYALRRA GI++I+ E Sbjct: 449 QPRGAGDALPSSDAGAVVALAERLELLLSIFAKGERPSGSSDPYALRRAGNGILQILWER 508 Query: 520 KIDIPLSQFIED-----QNLILFFH---------------DRLKLYLHDRDIRHDLIEAI 559 + L + ++ Q L+ F R+ L D DL++A+ Sbjct: 509 GWRLDLLELLKGAAGRWQELLPAFAVDTDVLVRDLVLLLRQRIHSQLEDDGHAPDLVQAV 568 Query: 560 LRPENDNLLTIVDLIKHLN--EFFSSAKGEKFLLSAKRIFQILA-IEEKKN-----REIS 611 + + D I L+ S + + L++ + + Q A + EK + + + Sbjct: 569 AGDAVSDERLLCDPIDVLDRIRLLSQLRQQNRLVAVQAVVQRAARLAEKGDLARGVLDAA 628 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QV 668 + P+ +E+ +Y V+ Q + Y + L +E FFD V Sbjct: 629 DTVDPKRFASPSEQAMYGVVQRLKPLAQA----RNYQALAHALVEATPTLEAFFDGDQSV 684 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +V DD E+R NRL+LL ++N ++ ++I Sbjct: 685 MVMADDPELRRNRLNLLSVLRNQAGVLAQFERI 717 >gi|218458475|ref|ZP_03498566.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli Kim 5] Length = 175 Score = 184 bits (466), Expect = 5e-44, Method: Composition-based stats. Identities = 85/169 (50%), Positives = 112/169 (66%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSKSGALRWVRPLQSIVCTFGPE 169 >gi|88808503|ref|ZP_01124013.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 7805] gi|88787491|gb|EAR18648.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 7805] Length = 719 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 195/758 (25%), Positives = 323/758 (42%), Gaps = 105/758 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA A L + L + + + + TP RL + +K L Sbjct: 5 FLLEIGTEELPADFVPSALRQLEQRVRSDLNDLRLAHGELSVTGTPRRLLVVVKDLIDSQ 64 Query: 64 PEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E+R GP V + G AI GF + G+ SD Q ++ PK G A ++ P Sbjct: 65 PDLEEDRKGPPVSSAFVDGRPGPAAI-GFAKRCGVDP-SDLQPRETPK-GPCLFAQVKTP 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPIS-AFSWIRPLKSILCILVAEDAKEKI 175 + +L VP I + + MRW S W+ L I V DA + + Sbjct: 122 GQASSALLGQYVPRWIDALQGRRFMRWGCGEQRFSRPVRWLVVLLGDALIPVTLDAADPV 181 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIK-VQSLDHYIRDLEEAMVLLDPECR----RNAILN 230 + G + GHR H P+K V+S + + L A V+++ E R R AI Sbjct: 182 VT-------SGRTSRGHRLH--QPLKDVKSAEELLAQLARAGVMVNREQRAETIRTAIAQ 232 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +A R + L +E++ LVE V G ++L LP E+I ++ +Q+ Sbjct: 233 EAERCGGQANCP----ESLFQELVDLVETPSVLKGKIADRFLDLPPEVIVTVMQAHQRYV 288 Query: 291 -----------VTRTREGVLANCFILVSNI--QASDGGAAIVQGNSRVVAARLEDALHFW 337 + VL F+LVSN ASD IV GN RV+ ARL DA F Sbjct: 289 PLLHPQAGSDPLQLQSRNVLRPEFLLVSNGLEPASD---TIVSGNQRVLGARLADAEFF- 344 Query: 338 KRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG 397 +D + +QR R ++ V F +GT +R R+ + Sbjct: 345 -------------------LTVDRRQSSEQR--RANLAQVTFAEGLGTLLDRSERMSWVM 383 Query: 398 KKIA---QLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 ++ QL + RA K DL ++V EFPELQG +G +Y + + E A Sbjct: 384 DQLLLALQLEGPIASHARRAAHFCKHDLVCQMVGEFPELQGLMGGKYLLEEGEVRDVALA 443 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 + EH +P G + PT+ ++LA++++ L++ +A ++P+GS DPYALRRA GI++ Sbjct: 444 VAEHYQPAGAGDAPPTSDAGALLALAERIELLLSIFAKGQRPTGSSDPYALRRAGNGIVQ 503 Query: 515 IILENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHD 554 I+ +PL + +L R+ + D Sbjct: 504 ILWNRGWRLPLQSLFKTAATHWAERFPAFKVEASALANDLGQLLRQRMVSQFEEDGFEID 563 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR---EIS 611 L++A+ + + ++ L++ + L ++ R+ + A+ ++ +R + Sbjct: 564 LVQAV----SGDGVSTDRLLEDPVDARDRLLLLNNLRTSGRLQGLQAVVQRASRLADKGD 619 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQ-ESMD----HKRYHQIGDLLHSICEPIEIFFD 666 L +S + + L+ S+ ++ E+M + Y + L +E FFD Sbjct: 620 LPLSSLCVEGVVDAELFDSPSEASLLVELEAMSPLAVARDYEGLAQKLQGAARALEAFFD 679 Query: 667 ---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+V DD +R NRL+LL ++N ++ I Sbjct: 680 GAESVMVMADDPSIRRNRLNLLGVLRNQAFVLARFDNI 717 >gi|207091685|ref|ZP_03239472.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_AG0C1] Length = 456 Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 147/484 (30%), Positives = 243/484 (50%), Gaps = 60/484 (12%) Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV-----TRTREGVLA 300 D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F ++ L Sbjct: 5 DRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAVFDQKSQEENPTLH 64 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 65 NGFIVVSNAISKDK-QKIIAGNQKVLKARLSDAVFFYEND-------------------- 103 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--------IDADVALVD 412 L KPLD A L+ VVF +GT +++ R ++ + + Q ++ + LV Sbjct: 104 LKKPLDN--APLE--SVVFVQGLGTLKDKMERESIIAQYLTQKYISSLNMPLEKALELVK 159 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P +P++ Sbjct: 160 RAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSLKEQYLPASENAPLPSSV 219 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----LENKIDIPLSQF 528 S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ LE + L Sbjct: 220 FSAIVALSLKLDSLFSLFSTGKIPSGSKDPFALRRLSFGLLKIVAHYGLEFDLKADLKNL 279 Query: 529 IEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEFF- 581 E + F + L+ +L +R D +I ++L +++ I+ +K L F Sbjct: 280 FEKVGVYQSFDLEVLEKFLLERFHNLIDCNPSIIRSVLNTNERDIVKIIQKVKALKRFLD 339 Query: 582 --SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 +A+ ++ L SA F+ LA I + +N S S E L+ + T Sbjct: 340 DPKNAQKKELLFSA---FKRLANINKDRNPNESSGFSTSLFKESQEHALFEAFNAIKTSA 396 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ES+D K G LH+ P+E +F VLV D E++ NR + L + L + ++ Sbjct: 397 FESLDSKIEAYFG--LHA---PLEEYFKSVLVMDKDIEIQKNRKNFLWGVYQSFLEIGDI 451 Query: 699 QKIV 702 ++I Sbjct: 452 KEIA 455 >gi|167044837|gb|ABZ09504.1| putative glycyl-tRNA synthetase beta subunit [uncultured marine crenarchaeote HF4000_APKG8D22] Length = 360 Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 129/387 (33%), Positives = 189/387 (48%), Gaps = 47/387 (12%) Query: 202 VQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQ 261 ++ L Y+ +L+DPE R+ IL LA G + ED +LL + LVE+ Sbjct: 1 MKDLASYLEKSANHFLLVDPEVRKQKILEQVQILAQEAGGFVEEDPELLNIVNYLVEFPV 60 Query: 262 VFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQG 321 G FD ++L LP+EL+ +T+K +QK F +G L FI +SN+ A G I G Sbjct: 61 AIRGDFDPRFLELPKELLVMTMKHHQKYFPVSDGKGNLLPGFITISNMSA---GHEIKNG 117 Query: 322 NSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHA 381 N RV+ ARLEDA F+ D+ NL ES + VVF Sbjct: 118 NERVLRARLEDARFFYNEDKKK--NLDDFVES--------------------LKGVVFQK 155 Query: 382 KIGTQGERVSRIRVLGKKIAQLIDAD---VALVDRAIVLSKADLCTEIVREFPELQGKIG 438 K+GT E++ RI L + ++ D AL RA L KADL T +V EFPELQG +G Sbjct: 156 KLGTLYEKMERICDLARILSTHACPDKEPQAL--RAGRLCKADLVTLMVYEFPELQGIMG 213 Query: 439 KEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSG 498 YA E + AI+EH +P ++ P +++ +++ADKLDT++ + PSG Sbjct: 214 GYYATHSGEEPTVAQAIQEHYRPAFAGDDPPASELGAVIAVADKLDTILGCIGVGLIPSG 273 Query: 499 SKDPYALRRATLGIIRIILENKIDIPLSQFIED-----------------QNLILFFHDR 541 S+DPY LRR LGII+I L + L +E+ +++ F R Sbjct: 274 SEDPYGLRRNALGIIQIFLHRGWQVSLDNLVEEGLRSMGSKIKLDPETIKNHVMELFSQR 333 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLL 568 K YL +D I+ +L D+++ Sbjct: 334 YKTYLDAEGFPYDAIDCVLSTGLDSIV 360 >gi|288916965|ref|ZP_06411337.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EUN1f] gi|288351674|gb|EFC85879.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EUN1f] Length = 1027 Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 192/748 (25%), Positives = 318/748 (42%), Gaps = 105/748 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE+PA + E + L+ L + + + TP R+ + ++P Sbjct: 313 LLFEIGVEELPAAEVTRQTEAVRAALVERLAATRLTHGEVLVRGTPRRIVAVVADVAPRE 372 Query: 64 PEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ GPR G KA GF+R G ++D + + +G ++A++R Sbjct: 373 PDVERVVRGPRRAAAYDAAGEPTKAATGFVRGQG-GDVADLTVVE--FRGVEHVALVRTD 429 Query: 117 -KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL ++ + + ++MRW + P +FS RP++ ++ +L A + Sbjct: 430 VGRPATEVLAEVLGAVLAGLRAERNMRW---NDPELSFS--RPVRWVVALLGA-----AV 479 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + + G + GHR PI+V D Y L VLLDP RR I+++A +L Sbjct: 480 VPVAVSTLAAGATSRGHRRAGSPPIEVAGADGYADLLAGHSVLLDPATRRELIVDEAAKL 539 Query: 236 AS----AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A+ + L+L + D+L E+ LVE+ + +GSF+++YL LP E++ + +Q+ V Sbjct: 540 AAEHQGTIDLDL--EGDVLAEVTNLVEYPRPVLGSFEQRYLELPAEILTTVMHKHQRYLV 597 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIV----QGNSRVVAARLEDALHFWKRDQNNLPNL 347 R G L CF+ +++ GA V GN V+ AR EDA F Sbjct: 598 VRDAAGALLPCFVTIAD------GAVDVPLVRAGNEAVLRARFEDAAFF----------- 640 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ----- 402 F+ DL PL A L L F ++G+ +R RI L +A Sbjct: 641 ---------FDADLKVPLATFRAGLAKL--TFEQRLGSVADRADRIARLAGVLADRLGTG 689 Query: 403 --------------LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN 448 L D A +DRA L+K DL T++V E L G + +EYA E Sbjct: 690 EGAATSGGTAAAGGLSPQDRATMDRAGALAKFDLATQMVIELSSLAGTMAREYARRAGEP 749 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRA 508 + A+ E PR +P ++LAD+LD L +A++ P+GS DP+ LRRA Sbjct: 750 EAVAVALYEMELPRRAGGVLPQTVPGALLALADRLDLLAGLFALDAAPTGSSDPFGLRRA 809 Query: 509 TLGIIRIILENK-----------------IDIPLSQFIEDQNLILFFHDRLKLYLHDRDI 551 LG+ I+ + I +P+SQ +Q F R L D + Sbjct: 810 ALGVTAILAQRPELAGLAVADMLAEAAKLIPVPMSQEALEQA-DAFVRGRFTQQLLDTGV 868 Query: 552 RHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 H L+ A+ P + L + + RI +I+ + I+ Sbjct: 869 DHRLVAAVA-PLTARPARATSTVAELRVLVEDPSFARLAAAVGRIRRIVPADTAPGIAIA 927 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTH--IQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 + P + RL ++ ++ S ++ E +E FFD V+ Sbjct: 928 DLVDP------VDHRLAQAATELSRQLVVRTSGRAPELVDFVAAAAALPEAVEAFFDGVM 981 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVIN 697 V ++ +R RL LL I+++ V++ Sbjct: 982 VMAEEPALRAARLGLLAEIRDVAGEVLD 1009 >gi|330937261|gb|EGH41275.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. pisi str. 1704B] Length = 436 Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 140/466 (30%), Positives = 212/466 (45%), Gaps = 42/466 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + L+ Sbjct: 5 DFLVELGTEELPPKTLVSLADAFFAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITALATQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGDVYLAVLRKPK 117 P++ GP A A DG L C +I + K +L KP Sbjct: 65 QPDRSVNLDGPPRQAAFDA-DGNPTQAALGFAKKCGVDLSEIDQSGPKLRYSQTILGKP- 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L TIV ++ +P K MRW ++RP + ++ + ++++D Sbjct: 123 --TTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVD 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 171 CTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELAA 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F G Sbjct: 231 QQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDGAG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ K+ F Sbjct: 291 KLLPRFITVANIESKD-PAQIIAGNEKVVRPRLTDAEFFFKQDK---------KQKLETF 340 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 N L +VVF A++G+ ++ R+ L IA I D RA +L Sbjct: 341 NDRLK-------------NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 SK DL +E+V EFPE+QG G YA E A+ E PRG Sbjct: 388 SKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRG 433 >gi|118488521|gb|ABK96073.1| unknown [Populus trichocarpa] Length = 512 Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 135/524 (25%), Positives = 258/524 (49%), Gaps = 47/524 (8%) Query: 185 CGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 CGN++YG R ++V+S + Y ++ A + ++ E R+ +IL ++ LA +V ++ Sbjct: 6 CGNLSYGLRNTPSATVQVESAESYEGVMQNAGINIEIEGRKRSILEQSNELAKSVKGRIL 65 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL E++ LVE +G F + +L LPE+L+ + ++ +QK F G L FI Sbjct: 66 IQESLLNEVVNLVEAPVPVLGKFKESFLELPEDLLTMVMQKHQKYFAITDDSGRLLPFFI 125 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 V+N ++ + +GN V+ AR EDA F++ D K S + LD Sbjct: 126 AVANGAINE--TVVKKGNEAVLRARYEDAKFFYEMDTRK-------KFSEFRNQLD---- 172 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIR-VLGKKIAQL-IDADV-ALVDRAIVLSKAD 421 ++FH K+GT +++ R+ V+ K +L ++ DV +V A L+ +D Sbjct: 173 -----------GILFHEKLGTMLDKMMRVENVITKLTVELGVNEDVIQVVQDAASLAMSD 221 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF L G + + YA+ + + +A+ E PR + VP I +++AD Sbjct: 222 LATAVVTEFTALSGIMARHYALREGYSAQIAEALLEITLPRFSGDMVPKTDAGIVLAIAD 281 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----------D 531 +LD+L+ +A +PS + DP+ LRR + G+++I+++N ++ L + + D Sbjct: 282 RLDSLVGLFAAGCQPSSANDPFGLRRISYGLVQILVDNDKNLDLVRALRLAADVQPIKAD 341 Query: 532 QNLI----LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++I LF RL+ +L D+ IR +++ ++L + + Sbjct: 342 VSMINDVHLFVTRRLEQFLVDKGIRPEIVRSVLAERASSPCLAAKTAYKMEALSRENLFP 401 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 K + + R +I+ K+ + +++ + E+ L++ + + I ++ + Sbjct: 402 KVVEAYSRPTRIV---RGKDVDTDMKVDEAAFETDEERALWSTFTSTKSKIYPGIEIDEF 458 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +I + +P+E FF+ V V V+D +R NRL+LL I ++ Sbjct: 459 VEIS---SELLQPLEDFFNNVFVMVEDERIRKNRLALLNKIADL 499 >gi|260436306|ref|ZP_05790276.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8109] gi|260414180|gb|EEX07476.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8109] Length = 721 Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 184/723 (25%), Positives = 314/723 (43%), Gaps = 88/723 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA +A + L + L+E + + + + TP RL + + L Sbjct: 5 FLLEIGTEELPADFVRQALDQLQQRVSRDLREARLAHGAVSVFGTPRRLVVSVADLEDRQ 64 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQI------KKDPKKGDVYLAVLRKPK 117 P+ E+R GP V K DG + C + ++D KG A + P Sbjct: 65 PDLQEDRKGPPVAQAFK--DGIPGPAAIGFAKRCGVDPSALEQRDTPKGPCVFATVLTPG 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++L+ ++P I + + MRW T A + RP++ +L + +E + Sbjct: 123 QACVELLQGLIPQWIDALQGRRFMRWGT-----GAQRFSRPIRWLLSLKGSEVIPVVLGG 177 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D E+ + HR H P+ + S + + L A V++D R I + A Sbjct: 178 AD-PEVRSDRFSRAHRLHGDEPLSIASAEQFGETLAAAGVVVDRAERAKRIRTSLDQSAQ 236 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR---- 293 A + L EE++ LVE ++ G+ +++L LP E+I ++ +Q+ + Sbjct: 237 AANGTPDCPESLFEELVDLVEDPKILEGTIAERFLQLPPEVISTVMQAHQRYVPLKVPGL 296 Query: 294 -------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 T E VL F+LV N A + IV+GN RV+ ARL DA F D+ Sbjct: 297 EADPLRLTAEAVLRPQFLLVGNGLAP-ASSLIVRGNERVLGARLADAEFFLDVDRRQ--- 352 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLD-VVFHAKIGTQGERVSRIRVLGKKIAQLID 405 +R + LD V F +G+ +R RI L + + + Sbjct: 353 --------------------SSASRREALDRVTFAEGLGSLLDRSERIERLTGLLLKQLG 392 Query: 406 ADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D ++VD RA K DL +++V EFPELQG +G +Y + + E A+ EH PR Sbjct: 393 LDESVVDTAERAAHFCKNDLVSQMVGEFPELQGLMGGKYLLEEGEPRDVALAVVEHYLPR 452 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 G + +P V+LA++L+ L++ +A ++P+GS DPYALRRA G+++I+ Sbjct: 453 GAGDALPATPAGAVVALAERLELLLSIFAKGQRPTGSSDPYALRRAGNGVVQILWGMAWR 512 Query: 523 IPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + L F+ +L R+ L D DL++A+ Sbjct: 513 LDLMAFLSIAVEEWAAQFPAFAVDASQLHYDLCQLMRQRIVSQLEDDGFAPDLVQAVAGD 572 Query: 563 --ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA-IEEK----KNREISLE-I 614 + LL+ +K + + L + + + Q A + EK +++ ++ + + Sbjct: 573 AVSSQRLLSDPLDVKQRIQLLRDLRDSGQLDAVQAVVQRAAKLAEKGDLARDQLVAGDVV 632 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVN 671 P +EK L+A + +Q + Y + D L + ++ FFD V+V Sbjct: 633 KPGRFESASEKDLFAALE----QLQPLAQQRSYQSLADALVAATPALQAFFDGDTSVMVM 688 Query: 672 VDD 674 VDD Sbjct: 689 VDD 691 >gi|148239654|ref|YP_001225041.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803] gi|147848193|emb|CAK23744.1| Glycyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803] Length = 719 Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 194/744 (26%), Positives = 318/744 (42%), Gaps = 99/744 (13%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA A L + LK+ + + + TP RL + ++ L Sbjct: 5 FLLEIGTEELPADFVPSALRQLEQRIRSDLKDLRLAHGELSVTGTPRRLLVVVRELIDSQ 64 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P+ E+R GP V G A GF + G+ D Q K PK G A ++ P Sbjct: 65 PDLEEDRKGPPVSQALVDGRPGPAAIGFAKRCGVDP-EDLQPKDTPK-GPCLFARVKTPG 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L VP I + + MRW S RP++ L +++ + +D Sbjct: 123 QPSSALLGECVPRWIDALQGRRFMRWGCGEQRFS-----RPVR-WLVVMLGDAVIPVTLD 176 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECR----RNAILNDAH 233 + G + GHR H +V S + +R L +A V+++ E R R AI++++ Sbjct: 177 TADPVVTSGRTSRGHRLHE-QLQEVNSAEDLLRQLNDAGVMVNREQRAETIRAAIVSESE 235 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R + L +E++ LVE V G ++L LP E+I ++ +Q+ R Sbjct: 236 RCDGQADCP----ESLFQELVDLVESPSVLKGRIADRFLELPPEVIVTVMQAHQRYVPLR 291 Query: 294 TREGV-----------LANCFILVSNI--QASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 + V L F+LVSN ASD IV GN RV+ ARL DA F Sbjct: 292 IPQAVSDPLQLQARNVLKPEFLLVSNGVESASD---TIVSGNQRVLGARLADAEFF---- 344 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 N+D + +QR L+ V F +G+ +R RI + ++ Sbjct: 345 ----------------LNVDRRQSSEQRRQSLER--VTFAEGLGSLLDRSERISWVMDQL 386 Query: 401 A---QLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 QL + RA L K DL ++V EFPELQG +G +Y + + E A+ E Sbjct: 387 LLALQLEGTVASHARRAAHLCKHDLVCQMVGEFPELQGLMGGKYLLEEGEPRGVALAVAE 446 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H P G + +P + ++LA++++ L++ +A ++P+GS DPYALRRA GI++I+ Sbjct: 447 HYLPAGSGDALPASDAGALLALAERIELLLSIFAKGQRPTGSSDPYALRRAGNGIVQILW 506 Query: 518 ENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIE 557 +PL +L R+ D DL++ Sbjct: 507 NRGWQLPLQSLFTTASTHWAERFPAFNVEAEALANDLGQLLCQRMVSQFEDDGFAIDLVQ 566 Query: 558 AILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISP 616 A+ + D + + K L + R+ + A+ ++ +R ++ P Sbjct: 567 AVCGEGVSTERLLEDPVDARDRLLLL----KTLRESGRLQDLQAVVQRASRLAEKGDLPP 622 Query: 617 QYLLLEA--EKRLYAVISDFGTHIQ-ESMD----HKRYHQIGDLLHSICEPIEIFF---D 666 L +E + L+ S+ ++ E++ K Y ++ L +E FF D Sbjct: 623 SKLSVEGIVDAFLFDSPSEAALLVELEALSPLAQAKDYERLAQRLQGAARALEAFFDGSD 682 Query: 667 QVLVNVDDREVRDNRLSLLQYIKN 690 V+V +D VR NRL+LL ++N Sbjct: 683 SVMVMAEDPSVRRNRLNLLGVLRN 706 >gi|318041339|ref|ZP_07973295.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. CB0101] Length = 721 Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 207/767 (26%), Positives = 334/767 (43%), Gaps = 114/767 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L ++ L E + + +R TP R+ L + L Sbjct: 1 MSTFLLEIGTEELPADFARLALPQLEQMVRRDLSEARLGHGAIRCTSTPRRIALQVHDLQ 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P+ EER GP + G A +GF + G+ + ++++ PK V+ VL Sbjct: 61 SAAPDLEEERKGPPAAQAFKDGVPTPAAEGFAKRCGIAAEA-LEVRETPKGPFVFATVLE 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L + +P I + + MRW + S S RP++ ++ +L E + Sbjct: 120 R-GRPAPELLSSWIPQWISSLQGRRFMRWGSGESRFS-----RPVRWLVALLDREVVPVR 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + D E+ GN + HR H + + S Y L A V +D R I + + Sbjct: 174 LEGSD-PEVVSGNSSRSHRLHG-GAVAINSASAYDEALAAAGVQVDRSQRAAWIRDTVAK 231 Query: 235 LASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A + LE D DL EE+ LVE + GS D+ YL LP E++ ++ +Q+ +V Sbjct: 232 AAES--LEATADLPNDLFEELTDLVEAPLLIEGSVDEHYLALPAEVLSTVMRAHQR-YVP 288 Query: 293 RTREGV------------LANCFILVSN--IQASDGGAAIVQGNSRVVAARLEDALHFWK 338 R G L F+ + N +A D + +GN RV+ ARL DA F Sbjct: 289 LYRRGADQDPLALDARTSLLPRFLCIGNGLPEALD---TVRRGNERVLKARLADAEFF-- 343 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR---- 394 N D + P R R + V F A +G+ +RV R+ Sbjct: 344 ------------------VNADRAVPSIDR--RDQLARVTFAAGLGSLLDRVERLEWITD 383 Query: 395 VLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 VL +++A L +A A A L K DL +++V EFPELQG +G +Y + + E A Sbjct: 384 VLLEQLA-LPEATAAHARHAAHLCKHDLVSQMVGEFPELQGVMGGKYLLAEGEPREVALA 442 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 + EH PRG +++P + V+LA++L+ L++ +A E+PSGS DPYALRRA G+++ Sbjct: 443 VLEHYLPRGAGDDLPASDAGAVVALAERLELLLSIYAKGERPSGSSDPYALRRAGNGVLQ 502 Query: 515 IILENKI--------------------DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHD 554 I+ D + +L R++ L + D Sbjct: 503 ILWAKGWRLDLLQLLQRACAHWAVLLPDFKVEAGALAADLGDLLRQRVQSLLEEVGTDAD 562 Query: 555 LIEAI----------LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ------ 598 L++A+ LR D DL+ L A + + A R+ + Sbjct: 563 LVQAVAGDSVPLERLLRDPADA-RERADLLMQLRASGDLAAVQAVVTRAARLAEKGDLSA 621 Query: 599 -ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 +L+ N + E S + +L+ +L V + G RY Q+ L + Sbjct: 622 TVLSAAGVVNAAL-FEKSSEAGMLQVIDQLEPVATATGA--------DRYSQLAQGLIAG 672 Query: 658 CEPIEIFFD---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FFD V+V DD +R NRL+LL ++N ++ + +I Sbjct: 673 TAALAAFFDGDQSVMVMADDPAIRTNRLNLLGVLRNQASVLADFSRI 719 >gi|149193978|ref|ZP_01871076.1| glycyl-tRNA synthetase subunit beta [Caminibacter mediatlanticus TB-2] gi|149135931|gb|EDM24409.1| glycyl-tRNA synthetase subunit beta [Caminibacter mediatlanticus TB-2] Length = 471 Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 141/508 (27%), Positives = 255/508 (50%), Gaps = 51/508 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L+EI EE+PA ++ + +L EE + N ++TP RL L+ + P Sbjct: 6 LVEIGVEELPAIPFLNELPNIEKKWLNIL-EEYNLKTNFEFFYTPRRLVLWHREF-PIKQ 63 Query: 65 EKIEERL--GPR--VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 E IE+ + P+ V K A+ GF + + + D Q K+ + +Y L K K Sbjct: 64 EDIEKEIWGAPKSIVEKNKNALLGFAKKNNI-NVEDVQYKEKNGQEFLYYKTLIKGKES- 121 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++L ++ ++ + + K+M+W +IRP++ ILC+L +++ I Sbjct: 122 KELLPEMIEKWLKSLNFGKTMKWGRCEE-----EFIRPIRWILCML-----EDEAITFKK 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 N T HR I + + Y +L++ V++ + R+ IL + + Sbjct: 172 FCTTSSNFTLPHRVFK-EKIFIDFVGKYFCELDKKGVIVFQKERKEKILREIKEIEKKED 230 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +++ D +LL+EI+ + E+ +G FD+++L LP+E+I ++K +Q+ F + L Sbjct: 231 VKVEIDNELLDEIVAITEYPTALIGKFDEEFLALPQEVIITSMKEHQRYFPV-YKNNRLT 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FI+VSN +D I++GN +V+ ARL DA+ F+K D ++ LK Sbjct: 290 NAFIVVSN-AFTDNFEYIIKGNEKVLRARLSDAMFFYKNDLKKGLSIEGLK--------- 339 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++VF K+G+ ++V R +G+ +A + D + +AI L+KA Sbjct: 340 ---------------NIVFMDKLGSLYDKVKREEKIGEYLADEFNLDKEKIKKAINLAKA 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EF ELQG +G YA+ QNE+ AI+E ++ TNKIS ++++ Sbjct: 385 DLLSEMVYEFTELQGIMGYYYALAQNEDKEIAIAIKEQYT------DIATNKISAILNIS 438 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRA 508 LDT++ ++I + P G+KD ++++ Sbjct: 439 KNLDTILGLFSIGKIPKGNKDLIWIKKS 466 >gi|255085132|ref|XP_002504997.1| predicted protein [Micromonas sp. RCC299] gi|226520266|gb|ACO66255.1| predicted protein [Micromonas sp. RCC299] Length = 1045 Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 188/741 (25%), Positives = 330/741 (44%), Gaps = 97/741 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+P +E LS + L G+ + + TP R+ + +K L+ Sbjct: 357 DFLLEVGTEELPPADVASGSEQLSKAIEACLDAAGLTHGGVVVGATPRRMVVKVKDLAAA 416 Query: 63 SPEKIEERLGPRVGAG--------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 K E GP + KA GF + G + ++KD G+ A ++ Sbjct: 417 QESKQERNRGPPLSRAFEEDGVTPTKAAMGFAKKNG---VDPADLEKD---GEYVWANVQ 470 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +V+ +P + + +PK+MRW+ +AFS RPL+ +L + E Sbjct: 471 TVGRAAHEVIADALPGIVGGINFPKTMRWNGD----AAFS--RPLRWLLAM-----HGEY 519 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPI-KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + + G+ T R ++P P +V S H+ + LE + + + RR AI + A Sbjct: 520 HLPFVALGVASGSTTRLLR-NSPTPTAEVTSAAHHAQLLEGDTIEISFDARRAAIWSAAE 578 Query: 234 RLASAVG----LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +LA+ V E L++E++ L+E +G FD +L LP+E++ + ++ +Q+ Sbjct: 579 KLAAGVNGVVPPTAGESGGLIDEVVNLIESPTPIIGGFDPAFLELPKEVLVMVMRKHQRY 638 Query: 290 F-VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F V G L FI V+N S + GN V+ AR EDA F++ D L+ Sbjct: 639 FPVEDVATGDLLPHFITVAN--GSVNPDVVRAGNESVLKARYEDAKFFYEADTRR--KLA 694 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---D 405 K D+ + F ++GT E+ R+ L K+A + + Sbjct: 695 DFKP--------------------DLAGITFQTELGTMLEKTERVEKLAPKLATSLGFSE 734 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D + A L++ADL T++V+EF L G +GK YA + + C+AI E PR Sbjct: 735 SDAKVATEAAALARADLATQLVQEFTSLAGVMGKHYAAREGLDAPLCEAIFEAALPRSSG 794 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK----- 520 + +P++ I V++AD+LDTL +A+ P + DP+ LRRA G ++ ++ + Sbjct: 795 DILPSSPAGIAVAVADRLDTLAGLFAVVGAPKATADPFGLRRAAYGAVQALVASNSRCDL 854 Query: 521 ----IDIPLSQFIEDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + Q +E + ++ + RL+ YL D + + A+L + Sbjct: 855 RAALAEAAALQPVECGDDVVDECLEYMTRRLEQYLVDSGCGVEAVRAVLAERGGDPAVAA 914 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK--KNREI--SLEISPQYLLLEAEKRL 627 + L+ E K +LA + + +E+ LE+ + L+ E L Sbjct: 915 VTARALDAAIVGGSEE-----LKAAMTVLARPTRLVRGKELPADLEVKKESLVDAEEVAL 969 Query: 628 Y----AVISDFGTHIQESMDHKRYHQIGD---LLHSICEPIEIFFDQVLVNVDDREVRDN 680 Y A G H + + +GD S+ E E FFD+V V ++ E+R N Sbjct: 970 YEAYVAAREKVGVHSEAT--------VGDLLSAAASLSEASEAFFDKVYVMAEEPELRRN 1021 Query: 681 RLSLLQYIKNIILIVINVQKI 701 R++L+ I ++ +++ ++ Sbjct: 1022 RMALMNAIASLSEGIVDFTEL 1042 >gi|330443837|ref|YP_004376823.1| glycyl-tRNA synthetase [Chlamydophila pecorum E58] gi|328806947|gb|AEB41120.1| Glycyl-tRNA synthetase [Chlamydophila pecorum E58] Length = 1008 Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 156/595 (26%), Positives = 266/595 (44%), Gaps = 77/595 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA+ + L ++ LL+ + Y+ + + +P RL + + L+P Sbjct: 315 DFLLEIGSEELPAKFVPIGIQQLESLITKLLESYRIPYEKLEVFGSPRRLAVLIHKLTPI 374 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKK-------------GDVY 109 + +K E+ GP + A G + S G Q S + ++ V Sbjct: 375 TTQKASEKKGPPI-ASLFTESGEVSSQGQQFFSAQHVVLSHREELSQHTQFAIRVINQVE 433 Query: 110 LAVLRKPKRLIED--VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 P+ IE +L +P I + +PK M W +S + RP++ L L Sbjct: 434 YLFFLTPETSIETAKILTEELPKLIHTMKFPKKMIWD-----MSGVEYARPIR-WLVALY 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 D I+ L + I T GHR P + + S Y+ L A V++ + R Sbjct: 488 GND----ILPLTIGSISASRNTQGHRQLDPRTLSISSPKDYLDTLRSACVIVS-QKERQE 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ R S+ + + D L+EE + L E V G F + +P+EL+ + +Q Sbjct: 543 IIEHGLRAHSSPTITPIMDSQLIEETVFLTEHPFVTCGKFSSTFCSVPKELLVAEMIQHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T+ G + N F+ V++ +D I++GN + + RL D Sbjct: 603 RYFPTQDTTGAITNSFVFVTDNSPND---VIIEGNEKALTPRLTDG-------------- 645 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 A FN DL PL+ + +L+ V + +G+ +++ R++ + + L+ Sbjct: 646 ------AFLFNQDLQTPLETFVDKLN--SVTYFDALGSLYDKIERLKAHKEILFPLLPLG 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ++ AI K DL + +V EFPELQG +G+ Y ++ A+ EHL+ + Sbjct: 698 DSEDLNIAIRYCKIDLVSSVVFEFPELQGIMGEYYLKHAQLPVTAAKAVREHLRHITLGQ 757 Query: 467 NV-PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII--LENKIDI 523 + PT + +SL D+ D +I+ + +N KP+ S DPYALRR +L II ++ LE ID+ Sbjct: 758 TISPTGTL---LSLLDRFDNIISCFILNLKPTSSHDPYALRRQSLEIITLLSSLEFSIDL 814 Query: 524 P--LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL 560 ++ IE+ + +I F RL+ +L D+I + Sbjct: 815 SALFNKLIENFPKELPIGLWDKRAIIEQIISFIGGRLRTFLTSLGFSKDIIATVF 869 >gi|312906133|ref|ZP_07765145.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis DAPTO 512] gi|310627779|gb|EFQ11062.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis DAPTO 512] Length = 438 Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 144/471 (30%), Positives = 235/471 (49%), Gaps = 55/471 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 4 DLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAIPEK 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G KA GF+R G+ T D K+ VY+ K Sbjct: 64 QVDVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGV-TTEDIVFKELNGVEYVYVTKFTK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E VL + V I + +P +M W+ F +IRP+ I+ +L +++ Sbjct: 123 GQSAKE-VLTKLNDV-ITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A+ L Sbjct: 171 IPFKVLDVTTGQTSRGHRFLGD-DVTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANAL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F R Sbjct: 230 AAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRND 289 Query: 296 EGVLANCFILV---SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G+L FI V N+ + +++GN +V+ ARLEDA F+ D Sbjct: 290 QGLLMPHFIAVRNGDNVHLEN----VIKGNEKVLIARLEDAEFFYNED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADV 408 K L + +V FH KIG+ E++ R+ +++G+K+ L + ++ Sbjct: 334 ----------KKLTIEACVEKLKNVTFHEKIGSIYEKMQRVALIAQIIGRKVG-LSEEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EHL Sbjct: 383 EDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHL 433 >gi|166154138|ref|YP_001654256.1| glycyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|166155013|ref|YP_001653268.1| glycyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335378|ref|ZP_07223622.1| glycyl-tRNA synthetase [Chlamydia trachomatis L2tet1] gi|290463312|sp|B0B923|SYG_CHLT2 RecName: Full=Glycyl-tRNA synthetase; Short=GlyRS; Includes: RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName: Full=Glycine--tRNA ligase alpha subunit; Includes: RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit gi|165930126|emb|CAP03610.1| glycyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|165931001|emb|CAP06564.1| glycyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 1003 Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 183/728 (25%), Positives = 326/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGL---------QTISDCQIKKDPKKG 106 + E+ GP + G+ + F S GL Q + C+++ Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFPSHGLSISHRSALDQPSAICRVRSI-NGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ +G + N F++V + +D +IV+GN + +A RL D +K+ Sbjct: 602 QRYFPTQNMQGEITNRFLIVCDNSPTD---SIVEGNEKALAPRLTDGNFLFKQ------- 651 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 652 -------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 696 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 697 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 756 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII------------ 513 N+ T +S+ D++D L++ + + P+ S DPYALRR +L I+ Sbjct: 757 SNISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 814 Query: 514 -----RIILENKIDIPLSQFIEDQ---NLILFFHDRLKLYLHDRDIRHDLIEAILR---P 562 R+I IP + + ++ L F RL+ L ++I +L P Sbjct: 815 EDLFARLIRHFPSSIPNTVWSPEEVLSKLNTFVWGRLRTILSSLGFDKEIIATVLTDNCP 874 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + + R+ +ILA +S ++ Q L+ Sbjct: 875 KNP--LTIIQSAQSIQELKNTQILKTIAATHNRLKKILA-------SLSFSVTEQMFSLQ 925 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 926 SAEDLLFKQALD--RFVEETTALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 980 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 981 RNQRIALL 988 >gi|62185397|ref|YP_220182.1| glycyl-tRNA synthetase alpha chain [Chlamydophila abortus S26/3] gi|62148464|emb|CAH64234.1| glycyl-tRNA synthetase alpha chain [Chlamydophila abortus S26/3] Length = 1005 Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 179/723 (24%), Positives = 319/723 (44%), Gaps = 89/723 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI SEE+PA + L + LL + + Y ++ +P RL L + L P Sbjct: 315 NFLLEIGSEELPATFVPMGIQQLESLAKKLLSDYNIGYDSLEVLGSPRRLALLIYNLEPT 374 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISD--CQIKKDPK------------KGDV 108 + +K E+ GP V + + G + + G Q + I+ + +G Sbjct: 375 AIQKASEKKGP-VLSSLFSHSGDVTTQGEQFFATHHAHIRHYSELAQYSLFDIREVQGVR 433 Query: 109 YLAVLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 YL +L + ++ +L +P IQ + +PK M + S + RP++ ++ + Sbjct: 434 YLFLLYPEVRKDTAAILSNELPKLIQSMKFPKKMTYDD-----SGVEYARPIRWLVSLY- 487 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++ ++ NI++GHR P +++ S + Y+ L +A V++ + RR Sbjct: 488 ----GTSVVPFSFGKVSASNISWGHRQLDPREVQIPSCERYVDTLRDACVIVSHKERRE- 542 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 I+ + S+ + + + LLEE + L E V G FD ++ LP+EL+ + +Q Sbjct: 543 IIEQGLKSHSSDNVSPITNPRLLEETVFLTEHPFVTCGQFDPEFCSLPKELLIAEMVNHQ 602 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F T+ R + N FILV + +D I+QGN + + RL D Sbjct: 603 KYFPTQNRAQQITNQFILVCDNCPND---IIIQGNEKALTPRLTDG-------------- 645 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-A 406 A F DL PL + +L V + +G+ ++V R++ K + L+ + Sbjct: 646 ------AFLFAQDLKTPLTTFVDKLK--SVTYFEALGSLYDKVQRLKAHKKIVYPLLPLS 697 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 ++ AI KADL + +V EF ELQG +G+ Y + + AI EHL+ + Sbjct: 698 SEEDINTAIEFCKADLVSAVVNEFAELQGIMGEYYLKHAGLSHASAVAIGEHLRHITYGQ 757 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 V T +SL D+ D L++ + +N +P+ S DPYALRR +L I+ ++ ++I + L Sbjct: 758 TVSTT--GTLLSLLDRFDNLLSCFILNLRPTSSHDPYALRRQSLEILTLLHASEISLDLE 815 Query: 527 QFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND- 565 + ++L+ F RLK +L D I +L ++ Sbjct: 816 SLLYHLADNFPSTVEGTSWDKPAVIKDLLAFIWGRLKTFLASLGFSKDEIATVLSDTSEK 875 Query: 566 NLLTIVDLIKHLNEF--FSSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLE 622 N + I+ + + A EK + R+ +ILA ++ ++ +E+ Q Sbjct: 876 NPVEIIKSATAIQDMKAHQGAALEKITTTHNRLKKILASLKLSTHKHTPMELDLQ----- 930 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E RL A + F + +G+L + I F ++V V E+++ R+ Sbjct: 931 -EARLQAALDRFDASANIKNKKDYFLCLGEL----TDDINTFLNEVHVTSGSEELKNLRI 985 Query: 683 SLL 685 LL Sbjct: 986 HLL 988 >gi|111221456|ref|YP_712250.1| glycyl-tRNA synthetase [Frankia alni ACN14a] gi|111148988|emb|CAJ60668.1| Glycyl-tRNA synthetase (GlyRS) [Includes: Glycyl-tRNA synthetase alpha chain (Glycine--tRNA ligase alpha chain); Glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain)] [Frankia alni ACN14a] Length = 1069 Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 146/513 (28%), Positives = 237/513 (46%), Gaps = 50/513 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI +EE+PA + A + L+ L + + ++R TP R+ + ++P Sbjct: 311 LLFEIGTEELPAAEVTRTAAAVRAGLLDRLAATRLTHGDVRVQGTPRRIVAIVDDVAPRE 370 Query: 64 PEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ GPRV A KA GF R G +D Q+ V L V + Sbjct: 371 PDVERVVRGPRVAAAYDAAGAPTKAAVGFARGQGADP-ADLQVVTHRDVEHVAL-VRTEA 428 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R DVL ++ + + ++MRW+ S+ RP++ ++ +L E ++ Sbjct: 429 GRDATDVLAEVLGELVAGLRAERNMRWNDPE-----LSFSRPVRWLVALL-----GETVV 478 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + G T GHR PI+V S D Y L +LLDP RR+ +L A +L Sbjct: 479 PVAVSSLAAGRTTVGHRRAGSPPIEVASADGYPELLATRSILLDPAVRRDLVLEQAAKLT 538 Query: 237 SAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + G ++ D D L E+ LVE+ + +G+F+ ++L LP E++ ++ +Q+ R Sbjct: 539 ADTGGHIDPDADADTLAEVTNLVEFPRPLLGAFEARFLELPAEILTTVMRKHQRYLPVRD 598 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L F+ V++ Q D A + GN V+ AR DA F+ D P Sbjct: 599 AAGRLLPAFVAVADGQVDD--ALVRAGNEDVIRARFTDAAFFYDADVKVAPE-------- 648 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDADVAL 410 F +L+K + F ++G+ +R RI R LG +I D D A Sbjct: 649 -TFRAELAK-------------LTFEQRLGSVADRADRIGALARALGDEIGLGAD-DRAT 693 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +DRA L+K DL T++V E L G + +EYA E + A+ E PR +++P Sbjct: 694 LDRAATLAKFDLATQMVVELSSLAGTMAREYARRAGEPEAVATALYEMELPRRAGDDLPA 753 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPY 503 ++LAD+LD L+ +A++ P+GS DP+ Sbjct: 754 TVAGSLLALADRLDLLVGLFALDAAPTGSSDPF 786 >gi|329943164|ref|ZP_08291938.1| glycyl-tRNA synthetase, alpha subunit [Chlamydophila psittaci Cal10] gi|332287745|ref|YP_004422646.1| glycyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|313848316|emb|CBY17319.1| glycyl-tRNA synthetase alpha chain [Chlamydophila psittaci RD1] gi|325506997|gb|ADZ18635.1| glycyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|328814711|gb|EGF84701.1| glycyl-tRNA synthetase, alpha subunit [Chlamydophila psittaci Cal10] gi|328915000|gb|AEB55833.1| glycyl-tRNA synthetase, alpha/beta subunit [Chlamydophila psittaci 6BC] Length = 1005 Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 179/722 (24%), Positives = 318/722 (44%), Gaps = 87/722 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FLLEI +EE+PA + L + LL + + Y ++ +P RL L + L P Sbjct: 315 NFLLEIGAEELPATFVPIGIQQLESLAKKLLSDYNIGYDSLEVLGSPRRLALLIYNLEPT 374 Query: 63 SPEKIEERLGPRVGA-----GKKAIDG--FLRSTGLQTISDCQIKKDPK------KGDVY 109 + +K E+ GP + + G G F + + ++ + G Y Sbjct: 375 AIQKAVEKKGPILSSLFSDSGDVTTQGEQFFATHHVDIRHYSELSQHSLFDIREINGVQY 434 Query: 110 LAVLRKPKRLIEDV-LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 L +L R V L +P IQ + +PK M + S + RP++ ++ + Sbjct: 435 LFLLHPEVRKDTAVILSNELPKLIQSMKFPKKMTYDD-----SGVEYARPIRWLVSLY-- 487 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++ ++ NI++GHR P +++ S + YI L +A V++ + RR I Sbjct: 488 ---GTSVLPFSFGKVSASNISWGHRQLDPREVRIPSCERYIDTLRDACVIVSHKERRE-I 543 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + +L S+ + + + LLEE + L E V G FD ++ LP+EL+ + +QK Sbjct: 544 IEQGLKLHSSDSVSPITNPRLLEETVFLTEHPFVTCGQFDPEFCSLPKELLIAEMVNHQK 603 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F T+ + N FILV + +D I+QGN + + RL D Sbjct: 604 YFPTQNTVQQITNQFILVCDNCPND---IIIQGNEKALTPRLTDG--------------- 645 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-AD 407 A F DL PL + +L V + +G+ ++V R++ + L+ + Sbjct: 646 -----AFLFAQDLKTPLTTFVDKLK--SVTYFEALGSLYDKVQRLKAHKNIVYPLMPLSS 698 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 ++ AI KADL + +V EF ELQG +G+ Y + + AI EHL+ + Sbjct: 699 EEDINTAIEFCKADLVSAVVNEFAELQGIMGEYYLKHAGLSHASAVAIGEHLRHITYGQT 758 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 + T +SL D+ D L++ + +N +P+ S DPYALRR +L I+ ++ +++ + L Sbjct: 759 ISTT--GTLLSLLDRFDNLLSCFILNLRPTSSHDPYALRRQSLEILTLLHASEVSLDLEN 816 Query: 528 FIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-N 566 + ++L+ F RLK +L D I +L ++ N Sbjct: 817 LLYHLADNFPSTVEGTSWDKPAVIKDLLAFIWGRLKTFLASLGFSKDEIATVLSDTSEKN 876 Query: 567 LLTIVDLIKHLNEFFSS--AKGEKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + I+ + E ++ A EK + R+ +ILA ++ N+ S+E+ Q Sbjct: 877 PVEIIKSATAIQEMKANQGATLEKITTTHNRLKKILASLKLPTNKHTSMELGLQ------ 930 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E RL A + F + + +G+L + I +F ++V V E+++ R+ Sbjct: 931 EGRLKAALDQFDASANIKNKKEYFLCLGEL----ADNINLFLNEVHVTSGSEELKNLRIH 986 Query: 684 LL 685 LL Sbjct: 987 LL 988 >gi|224137130|ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|222835348|gb|EEE73783.1| predicted protein [Populus trichocarpa] Length = 512 Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 129/524 (24%), Positives = 254/524 (48%), Gaps = 47/524 (8%) Query: 185 CGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 CGN++YG R ++V+S + Y ++ A + ++ E R+ +IL ++ LA +V ++ Sbjct: 6 CGNLSYGLRNTPSATVQVESAESYEGVMQNAGINIEIEGRKRSILEQSNELAKSVKGRIL 65 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 + LL E++ LVE +G F + +L LPE+L+ + ++ +QK F G L FI Sbjct: 66 IQESLLNEVVNLVEAPVPVLGKFKESFLELPEDLLTMVMQKHQKYFAITDDSGRLLPFFI 125 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 V+N ++ + +GN V+ AR EDA F++ D K S + L+ Sbjct: 126 AVANGAINE--TVVKKGNEAVLRARYEDAKFFYEMDTRK-------KFSEFRNQLN---- 172 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALVDRAIVLSKAD 421 ++FH K+GT +++ R+ + K+ + + + +V A L+ +D Sbjct: 173 -----------GILFHEKLGTMLDKMMRVENMITKLTVELGVNEDVIQVVQDAASLAMSD 221 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T +V EF L G + + YA+ + + +A+ E PR + VP I +++AD Sbjct: 222 LATAVVTEFTALSGIMARHYALREGYSAQIAEALLEITLPRFSGDMVPKTDAGIVLAIAD 281 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----------D 531 +LD+L+ +A +PS + DP+ LRR + +++I+++N ++ L + + D Sbjct: 282 RLDSLVGLFAAGCQPSSANDPFGLRRISYALVQILVDNDKNLDLVRALRLAADVQPIKAD 341 Query: 532 QNLI----LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++I LF RL+ +L D+ IR +++ ++L + + Sbjct: 342 VSMINDVHLFVTRRLEQFLVDKGIRPEIVRSVLAERASSPCLAAKTAYKMEALSRENLFP 401 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 K + + R +I+ K+ + +++ + E+ L++ + + I ++ + Sbjct: 402 KVVEAYSRPTRIV---RGKDVDTDMKVDEAAFETDEERALWSTFTSTKSKIYPGIEIDEF 458 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +I + +P+E FF+ V V V+D +R NRL+LL I ++ Sbjct: 459 VEIS---SELLQPLEDFFNNVFVMVEDERIRKNRLALLNKIADL 499 >gi|295698764|ref|YP_003603419.1| glycyl-tRNA synthetase, beta subunit [Candidatus Riesia pediculicola USDA] gi|291157093|gb|ADD79538.1| glycyl-tRNA synthetase, beta subunit [Candidatus Riesia pediculicola USDA] Length = 689 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 176/720 (24%), Positives = 320/720 (44%), Gaps = 76/720 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH-- 62 L+EI +E++P R+ + S + LK+ + Y + RL + + G S Sbjct: 13 LIEIGTEDLPYRILWLILKKFSNNFLDQLKKNRFDSDKIYSYVSLRRLAVKIIGFSSSIE 72 Query: 63 --SPEK--IEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 PEK I+ R P+ K + + DC + + +Y ++R Sbjct: 73 HCKPEKRLIKTRDFPQNNFSK-----CYKKKCFEENYDCLDEISFHRKTLYSKIIR---- 123 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL---VAEDAKEKI 175 +V +++ + M+W + +IRP+ S++ +L + D +I Sbjct: 124 --------MVIFSLRNLSSFGFMKWGDGNVKNQ---FIRPVHSVVILLDKFLVNDG-NRI 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 +++ N +Y F I + S D Y L++ V+ D + R++ I + Sbjct: 172 FGINISRKTLKNRSY---FSEEKYILLDSADQYPYSLQKFGHVIPDYKVRKSIIRKKINI 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + + D +L+++ +VEW + SF K++L P+++I ++T K Sbjct: 229 LAKSSNGTVKLDYGILDQMTSMVEWPNLLKASFKKRFLSFPKDIIVHIVQTVHKYIPIYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L + FI V + ++ N +V+ +RLED L F+++D+ + SL + Sbjct: 289 KKGQLTSEFIFVYDAPFLRRKNKVIHDNQKVINSRLEDILFFFQKDR-----IYSLFDF- 342 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDR 413 L ++K ++F+ K+G E+ RI +L K I++ I LV R Sbjct: 343 ----LSMTKR------------ILFYKKLGNMYEKTKRIIILSKYISEKIGITQKKLVFR 386 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V F + QG +G YA L EN AI E PR + +P +KI Sbjct: 387 ASLLSKCDLATSMVNCFSDTQGIVGMCYAKLDMENDEVSIAIREQYYPRYSRDRLPISKI 446 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 +S++DK+D+L+ + I + G KDP LRR ++GI+RI++E K D L + IE Sbjct: 447 GDILSISDKIDSLVAMFGIGIEYQGKKDPLFLRRMSIGILRIMIEKKYDFNLLEIIEKSS 506 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +N+ F RLK + +LI +I +L IK + Sbjct: 507 KIYSSFLFRKRDFLKNIDNFLMRRLKYWYFQNGCPMNLINSIQLSSIKDLQDFNLKIKAI 566 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F S+ K + KRI +I+ K ++ +I Q L E L+ Sbjct: 567 LLFQSNEKLQNLFRINKRISKIV---NKNTNQVHDDIDHQLLQSTQEIELFQTFLSVKRE 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + K Y + +H + P++ FF ++ + +R NR+++L+ +++++ +I+ Sbjct: 624 VYSLFSRKMYFECMLKMHDLVIPVDHFFKHTIIMDKNHNIRQNRINILKSVQSLLSKIID 683 >gi|255311632|ref|ZP_05354202.1| glycyl-tRNA synthetase [Chlamydia trachomatis 6276] gi|255317933|ref|ZP_05359179.1| glycyl-tRNA synthetase [Chlamydia trachomatis 6276s] Length = 1003 Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 184/728 (25%), Positives = 325/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKK---------G 106 + E+ GP + G+ + F S GL +IS P Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGL-SISHRSALDQPSAIWRVRSINGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ +G + N F++V + +D +IV+GN + +A RL D +K+ Sbjct: 602 QRYFPTQNMQGEITNRFLIVCDNSPTD---SIVEGNEKALAPRLTDGNFLFKQ------- 651 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 652 -------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 696 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 697 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 756 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL--ENKIDI 523 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ ++ +DI Sbjct: 757 SSISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 814 Query: 524 P--LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL---RP 562 ++ I L F RL+ L ++I +L RP Sbjct: 815 EDLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNRP 874 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + R+ +ILA +S I+ Q L+ Sbjct: 875 KNP--LTIIQSAQSIQELKNTQILKTIAAMYNRLKKILA-------SLSFSITEQMFSLQ 925 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 926 SAEDLLFKQALD--RFVEETTALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 980 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 981 RNQRIALL 988 >gi|329913694|ref|ZP_08275986.1| Glycyl-tRNA synthetase, beta subunit [Oxalobacteraceae bacterium IMCC9480] gi|327545289|gb|EGF30537.1| Glycyl-tRNA synthetase, beta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 468 Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 126/393 (32%), Positives = 203/393 (51%), Gaps = 34/393 (8%) Query: 93 TISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA 152 T++D + D K D + + D L++++ AI K+ PK M + S Sbjct: 109 TLADLERAAD-GKADSFFYNYSAEGASLRDGLQSVLEDAIAKLQIPKLMSYQRPDG--ST 165 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 ++RP+ ++ + ++++ + L + G +T GHRF + +++ D Y L Sbjct: 166 VQFVRPVHKLIALF-----GDELLPVSLLGLQAGRVTLGHRFLSEGELRISDADSYASIL 220 Query: 213 E-EAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKY 271 E + V+ P R+ I A LA+A ++ + LL+E+ LVEW V+ F++++ Sbjct: 221 ELQGKVIASPAARKENI--RAALLAAAGTDRVLMPEALLDEVSALVEWPVVYACHFEEEF 278 Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 L +P+E + LT++TNQK F G L + F++VSNI A++ I+ GN RVV RL Sbjct: 279 LAVPQECLILTMQTNQKYFALTDDHGKLRSRFLIVSNI-ATEDPQHIIGGNERVVRPRLS 337 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F+++D+ K L +R+ L +V+H K+GTQ +R + Sbjct: 338 DAKFFFEQDKK--------------------KTLAERLPGL--AGIVYHNKLGTQAQRTA 375 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 R+ L KIA DVAL +RA +L+K DL T++V EFPELQG +G YA E Sbjct: 376 RVTALAGKIALASGNDVALAERAALLAKTDLITDMVGEFPELQGIMGTYYAHHDGEPAEV 435 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 AI EH +PR + +P + V+LADKL+ Sbjct: 436 AVAISEHYQPRFAGDALPASTTGTAVALADKLE 468 >gi|225453368|ref|XP_002270774.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1456 Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 136/552 (24%), Positives = 263/552 (47%), Gaps = 52/552 (9%) Query: 157 RPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM 216 RP++ IL + + ++ + GN++YG R + IKV+S + Y + A Sbjct: 927 RPIRWILAL-----HGDVVVPFMFAGVLSGNLSYGLRNTSSATIKVESAESYATVIRNAG 981 Query: 217 VLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPE 276 + LD E R+ IL + LA V ++ LL+E++ LVE +G F + +L LP+ Sbjct: 982 ISLDIEERKQTILEQCNALAKGVNGHILLQGSLLDEVVNLVEAPVPVIGKFKESFLELPK 1041 Query: 277 ELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHF 336 +L+ + ++ +QK F G L FI V+N ++ + +GN V+ AR EDA F Sbjct: 1042 DLLTMVMQKHQKYFAITDDSGRLLPYFITVANGAINE--MVVRKGNEAVLRARYEDAKFF 1099 Query: 337 WKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVL 396 + +D K + ++L+ ++FH K+GT +++ R++ + Sbjct: 1100 --------------------YEMDTRKKFSEFRSQLE--GILFHEKLGTMLDKMIRVQNM 1137 Query: 397 GKKIA---QLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD 453 +++ Q+ + + ++ A L+ +DL T +V EF L G + + YA+ + + Sbjct: 1138 VAELSLALQVNEDKLQIIQDAASLAMSDLATAVVTEFTSLSGIMARHYALRDGYSEQIAE 1197 Query: 454 AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII 513 A+ E PR + VP + I +++AD+LD+L+ + +PS + DP+ LRR + G++ Sbjct: 1198 ALFEITLPRNSGDIVPKTDVGIVLAVADRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLV 1257 Query: 514 RIILENKIDIPLSQFIE----------DQNLI----LFFHDRLKLYLHDRDIRHDLIEAI 559 ++++E ++ L ++ + N+I F RL+ +L DR+I +++ +I Sbjct: 1258 QVLVEKDKNLDLRHALQLAAAVQPITIEANIIDDVHQFVTRRLEQFLVDREISPEVVRSI 1317 Query: 560 LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYL 619 L E N + K + + ++GE + + I K+ E +E+ Sbjct: 1318 LT-ERANWPCLA--TKSAYKMDAMSRGELLPKVVEAYSRPTRIVRGKDVEADMEVDEASF 1374 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 E+ L+ I ++ + + L +P+E FF+ V V V++ +R Sbjct: 1375 ETNEERALWRAFLSVRNKIYPGIEVDDFFEASSQL---LQPLEDFFNNVFVMVEEERIRK 1431 Query: 680 NRLSLLQYIKNI 691 NRL+LL+ I ++ Sbjct: 1432 NRLALLKKIADL 1443 Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+P + A++ L +++ LL ++ + + ++ + TP RL + +K LS Sbjct: 390 FLLEIGTEELPPQDVASASQQLKDLIMQLLDKQRLGHSEVQAFGTPRRLVVCVKNLSTKQ 449 Query: 64 PEKIEERLGPRVGAGKKAIDG 84 E E GP V KA DG Sbjct: 450 AENEVEVRGPPV---SKAFDG 467 >gi|255349195|ref|ZP_05381202.1| glycyl-tRNA synthetase [Chlamydia trachomatis 70] gi|255503732|ref|ZP_05382122.1| glycyl-tRNA synthetase [Chlamydia trachomatis 70s] Length = 1003 Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 182/728 (25%), Positives = 326/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADYGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGL---------QTISDCQIKKDPKKG 106 + E+ GP + G+ + F S GL Q + C+++ Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISHRSALDQPSAICRVRSI-NGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ +G + N F++V + +D +IV+GN + +A RL D +K+ Sbjct: 602 QRYFPTQNMQGEITNRFLIVCDNSPTD---SIVEGNEKALAPRLTDGNFLFKQ------- 651 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 652 -------------DLLAPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 696 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 697 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 756 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII------------ 513 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ Sbjct: 757 SSISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 814 Query: 514 -----RIILENKIDIPLSQFIEDQ---NLILFFHDRLKLYLHDRDIRHDLIEAILR---P 562 R+I IP + + ++ L F RL+ L ++I +L P Sbjct: 815 EDLFARLIRHFPSSIPNTVWSPEEVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCP 874 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + + R+ +ILA +S ++ Q L+ Sbjct: 875 KNP--LTIIQSAQSIQELKNTQILKTIAATHNRLKKILA-------SLSFSVTEQMFSLQ 925 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 926 SAEDLLFKQALD--RFVEETAALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 980 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 981 RNQRIALL 988 >gi|320539962|ref|ZP_08039621.1| putative glycine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] gi|320030148|gb|EFW12168.1| putative glycine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] Length = 403 Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 131/432 (30%), Positives = 204/432 (47%), Gaps = 43/432 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + A + L+ + + ++ + TP RL L + LS Sbjct: 6 FLVEIGTEELPPKALRSLAGAFAANFTTELENANLEHGSVSWFATPRRLALKVANLSAAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++I E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 66 ADRIVEKRGPAISQAFDATGKPNKAAEGWARGGGITVDQAERLVTD--KGEWLLYRAHVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++ +L ++V A+ K+P PK MRW S ++RP+ ++ +L AE +I Sbjct: 124 GQPVQQLLASMVNTALSKLPIPKLMRWGD-----SEVQFVRPVHTVTLLLGAE-----LI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 + + GHRF + + DHY + L E V+ D E R+ I D+ R Sbjct: 174 PGSVLGVESARTIRGHRFMGETEFTLDNADHYPQILLERGKVIADYEARKALIKRDSERA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G + + LLEE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 234 AAKIGGKADLSESLLEEVASLVEWPVVLTAKFEEEFLAVPAEALVYTMKGDQKYFPVYGS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 294 AGNLLPNFIFVANIESKD-PQQIITGNEKVVRPRLADAEFF------------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 FN D K L+ + RLD V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 334 -FNTDRKKRLEDHLPRLDT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNHATRAG 390 Query: 416 VLSKADLCTEIV 427 +LSK DL T +V Sbjct: 391 LLSKCDLMTNMV 402 >gi|297748924|gb|ADI51470.1| Glycyl-tRNA synthetase [Chlamydia trachomatis D-EC] gi|297749804|gb|ADI52482.1| Glycyl-tRNA synthetase [Chlamydia trachomatis D-LC] Length = 1031 Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 182/728 (25%), Positives = 324/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 342 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 401 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKK---------G 106 + E+ GP + G+ + F S GL +IS P Sbjct: 402 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGL-SISHRSALDQPSAIWRVRSINGT 460 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 461 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 515 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 516 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 569 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 570 AIIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 629 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ +G + N F++V + +D +IV+GN + +A RL D +K+ Sbjct: 630 QRYFPTQNMQGEITNRFLIVCDNSPTD---SIVEGNEKALAPRLTDGNFLFKQ------- 679 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 680 -------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 724 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 725 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 784 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL--ENKIDI 523 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ ++ +DI Sbjct: 785 SSISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 842 Query: 524 P--LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR---P 562 ++ I L F RL+ L ++I +L P Sbjct: 843 EDLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCP 902 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + R+ +ILA +S ++ Q L+ Sbjct: 903 KNP--LTIIQSAQSIQELKNTQILKTIAAMYNRLKKILA-------SLSFSVTEQMFSLQ 953 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 954 SAEDLLFKQALD--RFVEETTALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 1008 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 1009 RNQRIALL 1016 >gi|124023374|ref|YP_001017681.1| glycyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. MIT 9303] gi|123963660|gb|ABM78416.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9303] Length = 721 Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 164/545 (30%), Positives = 273/545 (50%), Gaps = 70/545 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L+EI +EE+PA A L ++ L+ + Y ++ TP RL + ++ L+ Sbjct: 1 MSTLLVEIGTEELPADFARLALPQLEQMVSRDLQGLRLSYGMIQCTSTPRRLVVLVEDLA 60 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + E R GP G K A GF + GL+ D +I++ PK V+ VL Sbjct: 61 SATADLEEVRKGPPAGQAFKNGVPTQAAAGFAKRCGLKP-EDLEIRETPKGPFVFATVLE 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +E +L +P I + + MRW S RP++ ++ +L E+ Sbjct: 120 HGRSAME-LLTDQIPEWIGSLQGRRFMRWGEGERRFS-----RPIRWLVALL-----DEQ 168 Query: 175 IIDLDLK----EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 II + L EI N++ GHR H + + S Y++ L E V +D + +R ++ Sbjct: 169 IIPVCLDGGDPEICAANLSRGHRLH-DQAVIIPSAGSYVQTLAEVGVEVDRQ-KRGTLIR 226 Query: 231 DAHRLASAVGLELVED--KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A A+A GLE D DL EE+ LVE + G+F K YL LP E++ ++ +Q+ Sbjct: 227 HAIDTAAA-GLEACPDCPDDLFEELTDLVEAPLLLEGAFAKSYLDLPAEVLSTVMRVHQR 285 Query: 289 CFVTRTR------------EGVLANCFILVSN--IQASDGGAAIVQGNSRVVAARLEDAL 334 +V R + L F+ +SN +ASD ++ +GN RV+ ARL DA Sbjct: 286 -YVPLYRLDAVNDPLALDAKSSLLPRFLCISNGLAKASD---SVRRGNERVLKARLADAE 341 Query: 335 HFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIR 394 F + D++ L+S++ R + V F +G+ +RV R+ Sbjct: 342 FFVEADRS----LASIER------------------RKKLAHVTFAEGLGSLLDRVERME 379 Query: 395 VLGKKIAQLID--ADVAL-VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 L + +L+D A++++ V RA+ L K DL +++V EFPELQG +G +Y + + E Sbjct: 380 WLTDVLVELLDLSAEISVQVRRAVHLCKHDLVSQMVGEFPELQGVMGAKYLLAEGEPREV 439 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A+ EH PRG + +P ++ ++LA++L+ L++ +A ++PSGS DPYALRRA G Sbjct: 440 ALAVLEHYLPRGAGDALPESESGAVLALAERLELLLSIYAKGDRPSGSSDPYALRRAGNG 499 Query: 512 IIRII 516 +++I+ Sbjct: 500 LLQIL 504 >gi|255507412|ref|ZP_05383051.1| glycyl-tRNA synthetase [Chlamydia trachomatis D(s)2923] gi|289525841|emb|CBJ15322.1| glycyl-tRNA synthetase [Chlamydia trachomatis Sweden2] gi|296435421|gb|ADH17599.1| glycyl-tRNA synthetase [Chlamydia trachomatis E/150] gi|296439138|gb|ADH21291.1| glycyl-tRNA synthetase [Chlamydia trachomatis E/11023] Length = 1003 Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 181/728 (24%), Positives = 326/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADYGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGL---------QTISDCQIKKDPKKG 106 + E+ GP + G+ + F S GL Q + C+++ Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGLSISQRSALDQPSAICRVRSI-NGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + G+ ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGSTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ +G + N F++V + +D +IV+GN + +A RL D +K+ Sbjct: 602 QRYFPTQNMQGEITNRFLIVCDNSPTD---SIVEGNEKALAPRLTDGNFLFKQ------- 651 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 652 -------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 696 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 697 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 756 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII------------ 513 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ Sbjct: 757 SSISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 814 Query: 514 -----RIILENKIDIPLSQFIEDQ---NLILFFHDRLKLYLHDRDIRHDLIEAILR---P 562 R+I IP + + ++ L F RL+ L ++I +L P Sbjct: 815 EDLFARLIRHFPSSIPNTVWSPEEVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCP 874 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + + R+ +ILA +S ++ Q L+ Sbjct: 875 KNP--LTIIQSAQSIQELKNTQILKTIAATHNRLKKILA-------SLSFSVTEQMFSLQ 925 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 926 SAEDLLFKQALD--RFVEETAALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 980 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 981 RNQRIALL 988 >gi|15605530|ref|NP_220316.1| glycyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX] gi|290463313|sp|P0CE22|SYG_CHLTR RecName: Full=Glycyl-tRNA synthetase; Short=GlyRS; Includes: RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName: Full=Glycine--tRNA ligase alpha subunit; Includes: RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit gi|3329262|gb|AAC68391.1| Glycyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX] Length = 1003 Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 182/728 (25%), Positives = 324/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKK---------G 106 + E+ GP + G+ + F S GL +IS P Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGL-SISHRSALDQPSAIWRVRSINGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ +G + N F++V + +D +IV+GN + +A RL D +K+ Sbjct: 602 QRYFPTQNMQGEITNRFLIVCDNSPTD---SIVEGNEKALAPRLTDGNFLFKQ------- 651 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 652 -------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 696 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 697 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 756 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL--ENKIDI 523 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ ++ +DI Sbjct: 757 SSISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 814 Query: 524 P--LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR---P 562 ++ I L F RL+ L ++I +L P Sbjct: 815 EDLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCP 874 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + R+ +ILA +S ++ Q L+ Sbjct: 875 KNP--LTIIQSAQSIQELKNTQILKTIAAMYNRLKKILA-------SLSFSVTEQMFSLQ 925 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 926 SAEDLLFKQALD--RFVEETTALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 980 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 981 RNQRIALL 988 >gi|195940758|ref|ZP_03086140.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. EC4024] Length = 395 Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 126/417 (30%), Positives = 202/417 (48%), Gaps = 41/417 (9%) Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+NI++ D + I+ GN +VV RL DA F Sbjct: 1 GKLLPNFIFVANIESKDP-SQIISGNEKVVRPRLADAEFF-------------------- 39 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 FN D K L+ + RL V+F ++GT ++ RI L IA+ I ADV RA + Sbjct: 40 FNTDRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNHATRAGL 97 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 98 LSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACA 157 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 158 VAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLY 217 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++I F R + + D D I+A+L +K ++ F Sbjct: 218 GDKLTNAKVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHFR 277 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ ILA K + ++ ++ L E L + ++ Sbjct: 278 TLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEISLAMQVVVLRDKLEPY 334 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L + + I+ FF++V+VNV+D+E+R NRLS+L+ ++ + L V ++ Sbjct: 335 FAEGRYQEALVELAELRDVIDAFFEKVMVNVEDKELRINRLSMLEKLRELFLRVADI 391 >gi|237805148|ref|YP_002889302.1| glycyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273448|emb|CAX10363.1| glycyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] Length = 1003 Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 182/728 (25%), Positives = 324/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKK---------G 106 + E+ GP + G+ + F S GL +IS P Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGL-SISHRSALDQPSAIWRVRSINGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ +G + N F++V + +D +IV+GN + +A RL D +K+ Sbjct: 602 QRYFPTQNMQGEITNRFLIVCDNSPTD---SIVEGNEKALAPRLTDGNFLFKQ------- 651 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 652 -------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 696 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 697 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 756 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL--ENKIDI 523 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ ++ +DI Sbjct: 757 SSISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 814 Query: 524 P--LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR---P 562 ++ I L F RL+ L ++I +L P Sbjct: 815 EDLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCP 874 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + R+ +ILA +S ++ Q L+ Sbjct: 875 KNP--LTIIQSAQSIQELKNTQILKTIAAMHNRLKKILA-------SLSFSVTEQMFSLQ 925 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 926 SAEDLLFKQALD--RFVEETTALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 980 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 981 RNQRIALL 988 >gi|296436346|gb|ADH18520.1| glycyl-tRNA synthetase [Chlamydia trachomatis G/9768] gi|296438205|gb|ADH20366.1| glycyl-tRNA synthetase [Chlamydia trachomatis G/11074] gi|297140706|gb|ADH97464.1| glycyl-tRNA synthetase [Chlamydia trachomatis G/9301] Length = 1003 Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 182/728 (25%), Positives = 324/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKK---------G 106 + E+ GP + G+ + F S GL +IS P Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGL-SISHRSALDQPSAIWRVRSINGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ +G + N F++V + +D +IV+GN + +A RL D +K+ Sbjct: 602 QRYFPTQNMQGEITNRFLIVCDNSPTD---SIVEGNEKALAPRLTDGNFLFKQ------- 651 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 652 -------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 696 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 697 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 756 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL--ENKIDI 523 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ ++ +DI Sbjct: 757 SSISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 814 Query: 524 P--LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR---P 562 ++ I L F RL+ L ++I +L P Sbjct: 815 EDLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCP 874 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + R+ +ILA +S ++ Q L+ Sbjct: 875 KNP--LTIIQSAQSIQELKNTQILKTIAAMHNRLKKILA-------SLSFSVTEQMFSLQ 925 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 926 SAEDLLFKQALD--RFVEETTALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 980 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 981 RNQRIALL 988 >gi|76789539|ref|YP_328625.1| glycyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|237803227|ref|YP_002888421.1| glycyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|76168069|gb|AAX51077.1| glycyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|231274461|emb|CAX11256.1| glycyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] Length = 1003 Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 182/728 (25%), Positives = 324/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKK---------G 106 + E+ GP + G+ + F S GL +IS P Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGL-SISHRSALDQPSAIWRVRSINGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ +G + N F++V + +D +IV+GN + +A RL D +K+ Sbjct: 602 QRYFPTQNMQGEITNRFLIVCDNSPTD---SIVEGNEKALAPRLTDGNFLFKQ------- 651 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 652 -------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 696 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 697 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 756 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL--ENKIDI 523 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ ++ +DI Sbjct: 757 SSISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 814 Query: 524 P--LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR---P 562 ++ I L F RL+ L ++I +L P Sbjct: 815 EDLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCP 874 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + R+ +ILA +S ++ Q L+ Sbjct: 875 KNP--LTIIQSAQSIQELKNTQILKTIAAMHNRLKKILA-------SLSFSVTEQMFSLQ 925 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 926 SAEDLLFKQALD--RFVEETTALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 980 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 981 RNQRIALL 988 >gi|15834798|ref|NP_296557.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum Nigg] gi|270284964|ref|ZP_06194358.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum Nigg] gi|270288989|ref|ZP_06195291.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum Weiss] gi|301336362|ref|ZP_07224564.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum MopnTet14] gi|11387146|sp|Q9PLC6|SYG_CHLMU RecName: Full=Glycyl-tRNA synthetase; Short=GlyRS; Includes: RecName: Full=Glycyl-tRNA synthetase alpha subunit; AltName: Full=Glycine--tRNA ligase alpha subunit; Includes: RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit gi|7190215|gb|AAF39052.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydia muridarum Nigg] Length = 1003 Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 185/726 (25%), Positives = 320/726 (44%), Gaps = 94/726 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + + Y N+ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPAAFVPTGIQQLESLAKKLLADHNISYNNLEVLGTPRRLALRIQGLSHL 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGL---------QTISDCQIKKDPKKG 106 + E+ GP + G+ + F S GL Q+ + C+++ KG Sbjct: 374 TIRPEAEKKGPPLSLLFEEDGSVSSQGEQFFASHGLSISHRSALDQSSTICRVRS--IKG 431 Query: 107 DVYLAVLRKPKRLIED--VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 YL L P+ IE +L +P+ I+ + +PK M W + RP++ ++ Sbjct: 432 TDYL-FLVIPEERIETAAILVNELPLLIRSMRFPKKMTWDN-----GGVEYARPIRWLVA 485 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECR 224 + ++++ + L + GNI++GHR + + S YI L +A V++ + R Sbjct: 486 LY-----GDQVLPISLGFVSSGNISWGHRQLDNRQLTIPSSKEYIDILRDACVIVSQKER 540 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R+ I L + + + L+EE + L E V F+ + LP+EL+ + Sbjct: 541 RSIIEQGLQNLTGDQTVAIAPEH-LIEETVFLTEHPFVICAQFNPDFCSLPKELLIAEMI 599 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 +Q+ F T+ +G + N F++V + +D I++GN + +A RL D +K+ Sbjct: 600 NHQRYFPTQNLQGEITNRFLIVCDNSPTD---TIIEGNEKALAPRLTDGNFLFKQ----- 651 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 DL LD + +L V + +G+ ++ +R+++ ++ L+ Sbjct: 652 ---------------DLLTSLDSFVEKLK--SVTYFDALGSLADKTARLKLHLEETYPLL 694 Query: 405 D-ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 +D A+ KADL + +V EFPELQG +G+ Y + + A+ EHL+ Sbjct: 695 PLCPKEDIDTAVHYCKADLVSAVVNEFPELQGIMGRYYLQNAALSKAAAIAVGEHLQHIT 754 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG------------ 511 +V T +S+ D++D L++ + + P+ S DPYALRR +L Sbjct: 755 LGSSVSTT--GALLSILDRVDNLLSCFILGLLPTSSHDPYALRRQSLELLTLLYTTQSSV 812 Query: 512 -----IIRIILENKIDIPLSQFIED---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 R++ IP + + + L F RLK L ++I A+L E Sbjct: 813 DIEDLFSRLVRHFPTTIPNTVWSPEDVLNKLCSFVWGRLKTILSSLGFAKEVIAAVLT-E 871 Query: 564 N--DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE--ISLEISPQYL 619 N N LTI++ + + E ++ E + R+ +ILA E SL S L Sbjct: 872 NCPKNPLTIINSARSIQELQNTQTLETIASTHNRLKKILASLSFSVTEQIFSLITSEDML 931 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 +A +R + +E + Q+ DL S +F D V + DD +R+ Sbjct: 932 FKQALERFKEATTSLPISSREYL-----LQLEDLSQSTA----LFLDSVRIADDDENIRN 982 Query: 680 NRLSLL 685 R++LL Sbjct: 983 QRIALL 988 >gi|29840580|ref|NP_829686.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydophila caviae GPIC] gi|29834930|gb|AAP05564.1| glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits [Chlamydophila caviae GPIC] Length = 1006 Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 181/723 (25%), Positives = 318/723 (43%), Gaps = 88/723 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 ++LLEI SEE+PA + L + LL + + Y+++ +P RL L + L P Sbjct: 315 NYLLEIGSEELPATFVPIGIQQLESLAKKLLADYNIGYESLEVLGSPRRLALLVYKLEPT 374 Query: 63 SPEKIEERLGPRVGA-----GKKAIDG--FLRSTGLQT-----ISDCQIKKDPKKGDVYL 110 + +K E+ GP + + G G F S + +S + + + G V Sbjct: 375 AIQKAVEKKGPMLSSLFSDSGDITAQGEQFFASHNISIRHYDELSQHSLFEIREIGSVNY 434 Query: 111 AVLRKPK--RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + P+ R +L +P IQ + +PK M + S + RP++ I+ + Sbjct: 435 LFILHPEVCRDTVTILANELPKLIQSMKFPKKMVYDD-----SGVEYARPIRWIVSLY-- 487 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 I+ ++ GN + GHR P + + S +HYI L A V++ + RR I Sbjct: 488 ---GTSILPFSFGKVVAGNTSMGHRQLDPREVPIPSCEHYIDTLRNACVVVSHKERRE-I 543 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + +L S+ + V + LLEE + L E V FDKK+ LP+EL+ + +QK Sbjct: 544 IEQGLKLHSSDNVSPVANPRLLEETVFLTEHPFVTCAQFDKKFCALPKELLIAEMVNHQK 603 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F T+ + N FILV + +D I++GN + + RL D + +D Sbjct: 604 YFPTQNTAKEITNQFILVCDNCPND---IIIEGNEKALTPRLTDGDFLFAQD-------- 652 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-AD 407 LK S F +D+ A V + +G+ ++V R++ + + L+ + Sbjct: 653 -LKTSLAIF-------VDKLKA------VTYFEALGSLYDKVERLKAHKEVVYPLLPISS 698 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + AI KADL + +V EF ELQG +G+ Y + + A+ EHL+ + Sbjct: 699 QEDITTAIEFCKADLVSAVVNEFAELQGIMGEYYIKHAGLSHAAAVAVGEHLRHITDGQT 758 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 + T +SL D+ D L++ + ++ +P+ S DPYALRR +L I+ ++ ++ + L Sbjct: 759 ISTT--GTLLSLIDRFDNLLSCFILDLRPTSSHDPYALRRQSLEILTLLHASEASLDLES 816 Query: 528 FIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-N 566 + ++++ F RLK ++ D I +L ++ N Sbjct: 817 LLHHLADNFPATVQGATWDKPAVIRDILTFIWGRLKTFMASLGFSKDEIATVLSDTSEKN 876 Query: 567 LLTIVDLIKHLNEFFSSAKG--EKFLLSAKRIFQILA-IEEKKNREISLEISPQYLLLEA 623 + ++ L +S + EK + R+ +ILA ++ N +E+ Q Sbjct: 877 PVEMLKSATALQAMKNSHRAILEKITTTHNRLKKILASLKLSTNTLTPIELDLQ------ 930 Query: 624 EKRLYAVISDFGTHIQESMDHKRYH-QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E +L A + F +Q K Y +GDL S I F ++V V E+++ R+ Sbjct: 931 ESQLKAALDHFDASVQTKDSKKDYFLSLGDLTDS----INTFLNEVHVTSGSEELQNLRI 986 Query: 683 SLL 685 LL Sbjct: 987 YLL 989 >gi|309810216|ref|ZP_07704061.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] gi|329920143|ref|ZP_08276974.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] gi|308169488|gb|EFO71536.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] gi|328936597|gb|EGG33041.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] Length = 374 Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 117/407 (28%), Positives = 203/407 (49%), Gaps = 44/407 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ E +L + ++++ +P MRW ++RP+ I+ + +E I Sbjct: 123 GKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE-----I 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + +I G TYGHRF + S D Y L+ V+ D R+N IL+ + L Sbjct: 171 IPVKILDIVAGRKTYGHRFLGESLVLATS-DDYESALKSQFVIADANQRKNMILSQINSL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 230 CEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI + N SD ++ GN +V+ ARL+DA F+ D+ Sbjct: 290 EGTLINHFIAIRN-GNSDYLDNVIAGNEKVLVARLDDAQFFYDEDK-------------- 334 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 PL + +L V FH KIG+ E++ R++++G+ I + Sbjct: 335 ------KYPLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGK 373 >gi|296437277|gb|ADH19447.1| glycyl-tRNA synthetase [Chlamydia trachomatis G/11222] Length = 1003 Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 180/728 (24%), Positives = 322/728 (44%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKK---------G 106 + E+ GP + G+ + F S GL +IS P Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFSSHGL-SISHRSALDQPSAIWRVRSINGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI+ + + + + + L++E + L E V FD + LP+EL+ + + Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLIDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ F T+ + + N F++V + +D +IV+GN + + RL D +K+ Sbjct: 602 QRYFPTQNMQREITNRFLIVCDNSPTD---SIVEGNEKALTPRLTDGNFLFKQ------- 651 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKKIAQLID 405 DL PL + +L V + +G+ ++ SR+++ L + A L Sbjct: 652 -------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEAYALLPL 696 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL+ Sbjct: 697 CAKEDIDTAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHLQHITLG 756 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL--ENKIDI 523 ++ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ ++ +DI Sbjct: 757 SSISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTTQSSVDI 814 Query: 524 P--LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR---P 562 ++ I L F RL+ L ++I +L P Sbjct: 815 EDLFARLIRHFPSSIPNTVWSPEAVLSKLNTFVWGRLRTILSSLGFDKEVIATVLTDNCP 874 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 +N LTI+ + + E ++ + R+ +ILA +S ++ Q L+ Sbjct: 875 KNP--LTIIQSAQSIQELKNTQILKTIAAMYNRLKKILA-------SLSFSVTEQMFSLQ 925 Query: 623 -AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 AE L+ D ++E+ + K Y LL + + E+F D V V DD Sbjct: 926 SAEDLLFKQALD--RFVEETTALPISSKDYLH---LLKELAQSTELFLDSVRVASDDEST 980 Query: 678 RDNRLSLL 685 R+ R++LL Sbjct: 981 RNQRIALL 988 >gi|153872572|ref|ZP_02001425.1| glycyl-tRNA synthetase, beta subunit [Beggiatoa sp. PS] gi|152070962|gb|EDN68575.1| glycyl-tRNA synthetase, beta subunit [Beggiatoa sp. PS] Length = 357 Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 116/365 (31%), Positives = 178/365 (48%), Gaps = 22/365 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + K +E L L+++ + Y+N Y TP RL + G+ Sbjct: 6 DLLIEIGTEELPPKALKKLSEAFLSGLCRGLEQKQLHYENATPYATPRRLAVLFNGVVTK 65 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ ER GP + G KA GF RS G++ Q++ KG + + Sbjct: 66 QDQRHIERRGPVLTAAFDKDGQPTKAALGFARSCGVEVNQLEQLET--PKGTWLVHRHTQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + ++ I+ A+ +P PK MRW + ++RP+ ++ + +++ Sbjct: 124 PGQATATLIPEIIEAALAALPIPKRMRWGDL-----PYEFVRPVHWVVILF-----GDEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ + + G T GHRFH P PI + + Y + LE V+ R+ I ND Sbjct: 174 INAKILGVQSGRETRGHRFHHPEPIALTFANTYAKSLEAGHVIASYTTRQAWIKNDVTET 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G E V D+DLL E+ LVEW MG++D+ +L +P E + T+K +QK F + Sbjct: 234 ALKTGGEAVIDEDLLNEVTSLVEWPVAIMGTYDESFLDIPPEALIATMKGHQKYFHIVNQ 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN-LPN-LSSLKES 353 +G L FI VSNIQ S + GN RV+ RL DA FW +D+ L N L+ LK Sbjct: 294 QGKLLPYFITVSNIQ-SRQPDVVRTGNERVIRPRLSDAAFFWTQDRKQPLENRLNPLKTV 352 Query: 354 ALKFN 358 K N Sbjct: 353 IFKIN 357 >gi|89897998|ref|YP_515108.1| glycyl tRNA synthetase [Chlamydophila felis Fe/C-56] gi|89331370|dbj|BAE80963.1| glycyl tRNA synthetase [Chlamydophila felis Fe/C-56] Length = 1007 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 184/728 (25%), Positives = 315/728 (43%), Gaps = 98/728 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + + Y+++ +P RL L + L P Sbjct: 316 DFLLEIGSEELPATFVPIGIQQLESLAKKLLSDYNIGYESLEVLGSPRRLALLIYKLEPT 375 Query: 63 SPEKIEERLGPRVGA-----GKKAIDG--FLRSTGL------QTISDCQIKKDPKKGDVY 109 + +K E+ GP + + G G F S + + Q + Y Sbjct: 376 AVQKATEKKGPILSSLFSDSGNVTTQGEQFFASHNVHIRHYNELFQYSQFEIREIHSVKY 435 Query: 110 LAVLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 L +L + + +L +P IQ + +PK M + S + RP++ ++ + Sbjct: 436 LFLLHPEVHQDTATILANELPRLIQSMKFPKKMVYDD-----SGVEYARPIRWLVSLY-- 488 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 I+ + N ++GHR P I + S + Y+ L +A V++ + RR I Sbjct: 489 ---GTSILPFSFGKTSASNTSWGHRQLDPREITIPSCESYVEALRDACVIVSHKERRE-I 544 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + S+ + + + LLEE I L E V FD K+ LP+EL+ + +QK Sbjct: 545 IEQGLKSHSSDNVFPIANPRLLEETIFLTEHPFVTCAQFDPKFCALPKELLIAEMVNHQK 604 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F T+ G + N FILV + +D I++GN + +A RL D + +D Sbjct: 605 YFPTQNASGEITNKFILVCDNCPND---IIIEGNEKALAPRLTDGDFLFAQD-------- 653 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-AD 407 LK S F L V + +G+ ++V R++ + I L+ + Sbjct: 654 -LKTSLSTFTDKLK-------------SVTYFEALGSLYDKVERLKAHKEIILPLLPLSS 699 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE--EHLKPRGPL 465 + AI KADL + +V EF ELQG +G+ Y L+N +S A+ EHL R Sbjct: 700 QEDISTAIEFCKADLVSAVVNEFAELQGIMGEYY--LKNAGLSKASAVAVGEHL--RHIT 755 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + + +SL D+ D L++ + ++ +P+ S DPYALRR +L I+ ++ ++ + L Sbjct: 756 DGQTISSTGTLLSLIDRFDNLLSCFILDLRPTSSHDPYALRRQSLEILTLLHASEASLDL 815 Query: 526 SQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + ++++ F RLK +L D I +L ++ Sbjct: 816 ESLLHHLADNFPATIQETSWDKPAVVRDILTFIWGRLKTFLASLGFSKDEIATVLSDTSE 875 Query: 566 -NLLTIVDLIKHLNEFFSSAKG--EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 N + I+ + +S K EK + R+ +ILA SL++S LE Sbjct: 876 KNPVEIIKSAMAIQGMKASHKDILEKITTTHNRLRKILA---------SLKLSTSKYALE 926 Query: 623 ----AEKRLYAVISDFGTHIQESMDHKRY-HQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 E +L +V+ F + + K Y +G+L S I +F + V V E+ Sbjct: 927 QLDAQEAKLKSVLDQFSVSVNIKNNKKDYLLNLGNLTDS----INMFLNTVHVTSGSEEL 982 Query: 678 RDNRLSLL 685 ++ R+ LL Sbjct: 983 QNLRIHLL 990 >gi|256375180|ref|YP_003098840.1| glycyl-tRNA synthetase, beta subunit [Actinosynnema mirum DSM 43827] gi|255919483|gb|ACU34994.1| glycyl-tRNA synthetase, beta subunit [Actinosynnema mirum DSM 43827] Length = 987 Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 128/458 (27%), Positives = 210/458 (45%), Gaps = 51/458 (11%) Query: 72 GPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PKRLIEDV 123 GPRV A KA GF R G+ ++ + + G ++A+ R R +V Sbjct: 376 GPRVSAAFDADGNPTKAAQGFARGQGVDV---SELGRVVENGVEHVALTRTVAGRGAVEV 432 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L ++ + ++ K+M+WS S+ RP++ +L +L + + + + Sbjct: 433 LSGVLGEVVTELRAEKNMKWSDPK-----LSFTRPVRWLLALL-----GDTPVPVVASAL 482 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 G T HR ++V S D Y L V+L + RR I+ A LA++VG Sbjct: 483 ASGTTTRVHRTADQPVVEVSSADGYREFLAGHGVVLSADERRAEIVRRAQELAASVGGS- 541 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV----- 298 V+ +L+E+ LVE +GSF+ YL LP +++ ++ +Q+ R G Sbjct: 542 VDLDGVLDEVTNLVEQPTPILGSFNADYLELPAQILTTVMRKHQRYLPVRAAGGEGAAGS 601 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L F+ V+N + + + GN V+ AR EDA FW+ Sbjct: 602 LLPHFVAVANGEVDED--LVRAGNEAVLRARYEDAAFFWR-------------------- 639 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 DL PL+ LD L F K+G+ +R +RI L +++A+++ A + RA L+ Sbjct: 640 ADLRTPLETMKGGLDKL--TFADKLGSMSDRSARIAALAERLAEVVGAGDETLRRAGELA 697 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL +++V E L G + +EYAV E A+ E PR + +P + +S Sbjct: 698 KFDLGSQMVIELSSLAGTMAREYAVRAGETPEVAQALYEMELPRSAGDAMPASTAGALLS 757 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 L D+ D L +A P+GS DP+ LRRA LG + ++ Sbjct: 758 LGDRFDLLAGLFATGANPTGSSDPFGLRRAALGAVSVL 795 >gi|312198751|ref|YP_004018812.1| glycyl-tRNA synthetase, subunit beta [Frankia sp. EuI1c] gi|311230087|gb|ADP82942.1| glycyl-tRNA synthetase, beta subunit [Frankia sp. EuI1c] Length = 1027 Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 185/749 (24%), Positives = 306/749 (40%), Gaps = 105/749 (14%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 LLEI EE+P A + + +L L E + + + TP RL + ++ Sbjct: 323 LLLEIGVEEMPPAEAVAARDQVESLLAKKLAEGRLAHGALTVSATPRRLVATVADVASRE 382 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + GP+V G A GF R+ G++ + + + + G +LAV+R Sbjct: 383 ADATRVVRGPKVTAAFRPDGTPTPAAAGFARANGVEVTA---LARTTENGVEHLAVVRHE 439 Query: 117 K-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + R D L + ++K+ K+MRW+ S+ RP++ ++ +L E + Sbjct: 440 RGRPATDALAPALADVVRKLRASKNMRWNNPE-----LSFTRPIRWVVALL-----GESV 489 Query: 176 IDLDLKEIPCGNITY--------GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 + +++ + G T R P +++ D Y L+ A +LLD RR Sbjct: 490 VPIEVGGLVSGRRTTLVRVAPGQPSRAGIPATVELTGADAYTAALDRAGILLDAGERRER 549 Query: 228 ILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 I A RLA+ G +++ + LL+E+ LVE +G FD YL LPE ++ ++ Sbjct: 550 IAAAAARLAAEAGGHVDVAAESRLLDEVSFLVEQPTPILGGFDPGYLELPEAVLTTVMRK 609 Query: 286 NQKCFVTRTREGV----------LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALH 335 +Q+ R L F+ V+N A+ GN V+ AR EDA Sbjct: 610 HQRYLPVRAGAAPGAAGPDDAGRLLPRFVAVANGTVDVD--AVRAGNEAVLRARFEDAAF 667 Query: 336 FWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV 395 F++ DL PL + RL L F K+G+ +R RI Sbjct: 668 FYR--------------------ADLKTPLAAMVERLSRL--TFTDKLGSMADRAGRIAT 705 Query: 396 LGKKIAQLIDADVALVDRAIV-----LSKADLCTEIVREFPELQGKIGKEYAVLQNENIS 450 L +A + +A DR ++ L K DL +++V E L G + EYA E + Sbjct: 706 LAAGLAGRLAPGLAGADREVLRRASDLVKFDLGSQMVIELTSLAGTMAHEYAQAAGEQPA 765 Query: 451 CCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATL 510 A+ E PR +P ++LAD+LD L+ A P+GS DP+A+RRA L Sbjct: 766 VATALLEAELPRSAGGPLPATVPGALLALADRLDALVGLAATVGLPTGSSDPFAVRRAAL 825 Query: 511 GIIRII----------LENKI-------DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRH 553 G + I+ L + + + ++ + D+ F RL+L L D Sbjct: 826 GALAILRTRPELAGLSLRDALAASAAGQPVAVTAALLDET-AAFLARRLELTLVDEGFPV 884 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--- 610 D + A+L P D L + L + L + F+ +A + R I Sbjct: 885 DHVRAVL-PHADRPAHAERLARQLAD-----------LRGRDDFRAVAAALDRARRIVPA 932 Query: 611 --SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 + P L AE L+ ++ G + + P+ FFD + Sbjct: 933 ATTAGYDPARLTEPAELALHQSVATVGAGLAGLGAAPDLVSFTAATAPLVAPVNQFFDDI 992 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVIN 697 LV D E+R RL LL ++++ V++ Sbjct: 993 LVMDPDPEIRATRLGLLATVRDLGAGVLD 1021 >gi|87302811|ref|ZP_01085622.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 5701] gi|87282694|gb|EAQ74652.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 5701] Length = 722 Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 192/765 (25%), Positives = 325/765 (42%), Gaps = 109/765 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L + L + + + + TP RL + + L Sbjct: 1 MATFLLEIGTEELPADFARLALPQLEQQVRHDLAAQRLPHGLVEATSTPRRLVVRVADLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIK------KDPKKGDVYLAVLR 114 + EER GP G+ +DG + + C + +D KG A L Sbjct: 61 LSQDDLAEERKGPP--GGQAFVDGQPGPAAIGFANRCGVDPASLELRDTPKGPFVFARLL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P R ++VL +P I + + MRW + RP++ ++ +L ++ Sbjct: 119 QPGRPSKEVLAECIPAWIAGLQGRRFMRWGEGE-----LRFSRPVRWLVALL-----DQQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + L+ I G I+ GHR + + + + L EA VL++ + R + I Sbjct: 169 VIPVVLEGSDPLISSGRISRGHRL-SEQTLTIPDAGLHSELLAEAGVLVERQQRADWIRQ 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 ASA ++L EE++ LVE + GS + ++L LP E++ ++++Q+ Sbjct: 228 QVLAAASAAQARPDLPEELFEELVDLVESPSLIEGSVEPRFLNLPPEVLSTVMRSHQRYV 287 Query: 291 VTR-----------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 R + + L F+ + N + A + +GN RV+ ARL DA F + Sbjct: 288 PLRRLDAAEDPLALSAQASLLPRFLCIGNGLPA-AAATVRRGNERVLKARLADAEFFLQA 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ + +QR RL V F +G+ +R R+ L + Sbjct: 347 DR--------------------AISCEQRRERL--ASVTFAEGLGSLLDRSDRLLWLSEL 384 Query: 400 IAQLID-----ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 + Q + + AL RA L K DL +++V EFPELQG +G +YA+ + E+ + A Sbjct: 385 LLQHLSLTRDHQEAAL--RAAHLCKHDLVSQMVGEFPELQGVMGAKYALAEGESRAVALA 442 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 + EH PRG + P++ V+LA++L+ L++ +A E+PSGS DPYALRRA G+++ Sbjct: 443 VLEHYLPRGAGDLPPSSDAGAVVALAERLELLLSIYAKGERPSGSSDPYALRRAGNGVLQ 502 Query: 515 IILENKIDIPL-----------SQFIED---------QNLILFFHDRLKLYLHDRDIRHD 554 I+ E + L +Q + D L+ R+ L + D Sbjct: 503 ILWERGWSLNLINLLKQASAHWAQLLPDLQLDAPSLAGELVEALRLRMVSLLDEEGFDAD 562 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 L++A+ D V + L + K L + Q+ ++ R L + Sbjct: 563 LVQAV---AGDG----VPAERLLGDPIDGRKRVALLAQLRVDGQLAPVQAVVQRAARLAV 615 Query: 615 S---------------PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 P +E + V+ + + RY Q+ L E Sbjct: 616 KGDLPVDVLSPTAVVDPALFSSPSEAGMLQVLQELDPILSLPDGEIRYRQLASKLAEGAE 675 Query: 660 PIEIFFD---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FFD V+V DD VR NRL+LL ++N ++ + K+ Sbjct: 676 ALSAFFDGASSVMVMCDDPAVRRNRLNLLAVLRNQASVLADFSKL 720 >gi|676852|gb|AAA82982.1| glycyl-tRNA synthetase [Chlamydia trachomatis] Length = 1008 Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 183/739 (24%), Positives = 324/739 (43%), Gaps = 115/739 (15%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI SEE+PA + L + LL + G+ Y+++ TP RL L ++GLS Sbjct: 314 DFLLEIGSEELPATFVPTGIQQLESLAKKLLADHGIAYKHLEVLGTPRRLALCIEGLSHV 373 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGL---------QTISDCQIKKDPKKG 106 + E+ GP + G+ + F S GL Q + C+++ Sbjct: 374 TIRPESEKKGPPLSLLFMTDGSVSPQGEQFFPSHGLSISHRSALDQPSAICRVRSI-NGT 432 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 D V+ + ++ +L +P I+ + +P+ M W + RP++ ++ + Sbjct: 433 DYLFLVIPEERKETAAILVNELPQLIRSIRFPQKMTWDN-----GGVEYARPIRWLVALY 487 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I+ + L + GN ++GHR + + S + Y+ L A V++ + RR Sbjct: 488 -----GDQILPISLGFVSSGNTSWGHRQLDNRQLTIPSSNMYVDTLRSACVIVSQKERR- 541 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI------R 280 AI+ + + + + + L++E + L E V FD + LP+EL+ Sbjct: 542 AIIKQGLQNLTGDQIVAIAPEHLVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQH 601 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 T+ N K + R + +L C + +D +IV+GN + +A RL D +K+ Sbjct: 602 PTVLPNTK-YARRNHQSILIVC-----DNSPTD---SIVEGNEKALAPRLTDGNFLFKQ- 651 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRV-LGKK 399 DL PL + +L V + +G+ ++ SR+++ L + Sbjct: 652 -------------------DLLTPLSSFVEKLK--SVTYFESLGSLADKTSRLKLHLEEA 690 Query: 400 IAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 A L +D AI KADL + +V EFPELQG +G+ Y + + + AI EHL Sbjct: 691 YALLPLCAKEDIDPAIHYCKADLVSSVVNEFPELQGIMGRYYLQNASLSRAAALAIGEHL 750 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-- 517 + N+ T +S+ D++D L++ + + P+ S DPYALRR +L I+ ++ Sbjct: 751 QHITLGSNISTT--GALLSILDRIDNLLSCFILGLLPTSSHDPYALRRQSLEILTLLYTT 808 Query: 518 ENKIDI-----------PLS-QFIEDQNLI-----------LFFHDRLKLYLHDRDIRHD 554 ++ +DI P S +F N + F RL+ L + Sbjct: 809 QSSVDIEDLFARLIRHFPSSARFASIPNTVWSPEEVLSKLNTFVWGRLRTILSSLGFDKE 868 Query: 555 LIEAILR---PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 +I +L P+N LTI+ + + E ++ + + R+ +ILA +S Sbjct: 869 IIATVLTDNCPKNP--LTIIQSAQSIQELKNTQILKTIAATHNRLKKILA-------SLS 919 Query: 612 LEISPQYLLLE-AEKRLYAVISDFGTHIQES----MDHKRYHQIGDLLHSICEPIEIFFD 666 ++ Q L+ AE L+ D ++E+ + K Y LL + + E+F D Sbjct: 920 FSVTEQMFSLQSAEDLLFKQALD--RFVEETTALPISSKDYLH---LLKELAQSTELFLD 974 Query: 667 QVLVNVDDREVRDNRLSLL 685 V V DD R+ R++LL Sbjct: 975 SVRVASDDESTRNQRIALL 993 >gi|307109903|gb|EFN58140.1| hypothetical protein CHLNCDRAFT_141905 [Chlorella variabilis] Length = 1035 Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 188/773 (24%), Positives = 323/773 (41%), Gaps = 118/773 (15%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LE+ SEE+P A + L + LL + + + TP RL + + L+ Sbjct: 303 FVLEVGSEELPPDDVVSALQQLKDRVPALLDRLRLGHGGVTVEGTPRRLAVLVHELAARQ 362 Query: 64 PEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E GP G A+ GF + G+ T+ DC + D K + A +++ Sbjct: 363 SNSSERVRGPPAKVAYDAAGTPSPALLGFCKKNGV-TVEDCFAEVDGKGVEYVWAEVKQM 421 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL +P + + + KSMRW + +A+S RPL+ +L + E + Sbjct: 422 GRPAAEVLLEELPALLASLSFKKSMRWRSD----TAYS--RPLRWLLAL-----HGEAAV 470 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + G T R +V S D Y+ L++ + L E R+ +I A Sbjct: 471 PFTYACLQAGATTRLLRNADQPEQQVASADAYLSVLQQGRISLGLEARKESIWQAVTAAA 530 Query: 237 SAVGLELVEDK---DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF-VT 292 VG +V D DLLEE+ LVE V +G+FD +L LP E++ L ++ +Q+ F V Sbjct: 531 EGVG-GVVPDGTRGDLLEEVANLVESPTVLLGAFDAAFLVLPREVLVLVMRKHQRYFPVY 589 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + + L F+ V+N + + GN V+ AR EDA F Sbjct: 590 KHQSDELLPYFVTVANGEVDV--PTVQAGNEAVLRARFEDAQFF---------------- 631 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVA 409 +N DL+ PL AR + +F +G+ ++ +R+ L + A L DA V Sbjct: 632 ----YNNDLATPLAD--ARPRLAGTMFQKDLGSLLDKSARVEQLVPALGAAAGLQDA-VP 684 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCD---------------- 453 + +A L KADL T +V E L G +G+ YA+ E + + Sbjct: 685 VAVQAAHLCKADLATSMVTEMTALAGTMGRHYAL--KEGLPAGEPGGRGGWLPPGAGAGL 742 Query: 454 ----------------AIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 AI E + PR + +P + VS+ADKLD+L+ +A P+ Sbjct: 743 RPGPEPGSAAAANVAEAIFESVLPRSAGDRLPQTPAGLLVSVADKLDSLVGLFAAGCAPT 802 Query: 498 GSKDPYALRRATLGIIRIILEN--KIDI-----------PLSQFIEDQNLIL-FFHDRLK 543 + DPY LRRA +G+++ +L ++D+ P + Q ++ F RL+ Sbjct: 803 ATADPYGLRRAAVGLLQALLAGGTRLDLGTAVAAAAAVQPCAVTPHSQAAVVEFVERRLE 862 Query: 544 LYLHDRDIRHDL--IEAILRPENDNLLTIVDLIKHLN------EFFSSAKGEKFLLSAKR 595 L D ++ + + A LR + + + + E A R Sbjct: 863 QLLSDAGVQVQIEAVRAALRERGRDAALAARTAREIRVGMPGAGAGAGPADEMAAGEAGR 922 Query: 596 IFQILA-------IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + Q++A + K + + + E E+ L+A + M + Sbjct: 923 LHQVMAALARPVRLTRGKQIDAGWTVQEELFEQEEERALHAAYRQAAAQVTPDMPVPAFL 982 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L P++ FFD+V V +++ VR NRL+LL+ + + ++++ ++ Sbjct: 983 AAAEPL---IAPLDAFFDKVFVMCEEQAVRQNRLALLRDVAALPAGILDLAEL 1032 >gi|255029589|ref|ZP_05301540.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes LO28] Length = 368 Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 109/367 (29%), Positives = 187/367 (50%), Gaps = 33/367 (8%) Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-- 405 + L ++ + DL +D+ +A+L ++VFH K+GT E++ R++ + +A +D Sbjct: 1 ARLSDADFFYQEDLKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQ 58 Query: 406 -ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P Sbjct: 59 EEDKQDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSA 118 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP Sbjct: 119 EGELPQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIP 178 Query: 525 LSQFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 + + I + + F +RL++ L IRHD+I+A++ + + Sbjct: 179 MLEVISRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPN 238 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 + ++D + LNE A+ E F + + + +++ I K E +E+ P E E+ Sbjct: 239 VIPQLIDRAQILNE---HAEAEWFRPTIEALSRVVKI--AKKYEDGVEVDPALFENEYEQ 293 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+ + +R DL + I+ +FD LV D+ E+++NRL+LL Sbjct: 294 ALFDKLEKLKFDYAGLTIIERLKAFADLRTT----IDAYFDNTLVMSDNDELKNNRLALL 349 Query: 686 QYIKNII 692 + + I Sbjct: 350 FELASFI 356 >gi|322515584|ref|ZP_08068564.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] gi|322118340|gb|EFX90610.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] Length = 367 Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 113/399 (28%), Positives = 192/399 (48%), Gaps = 45/399 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQSGLSFEKVEWFAAPRRLAVKMLGLATA 64 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A KA +G+ R G+ ++ D + V+ AV+ Sbjct: 65 QPSKEIEKRGPAVSAAFDADGNPTKAAEGWARGCGISVDQAERLATDKGEWLVHRAVIEG 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++L I+ ++ +P PK MRW ++RP+ ++ E Sbjct: 125 QPTK---NLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ ++ + N+ GHRF H + D Y+ L E+ MV+ D R+ IL + Sbjct: 172 LIEGEILGVKIANVVRGHRFLGEHEFTISHADEYLTALREKGMVVADFNERKALILAKSQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 EEATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI VSNI D AI++GN +VV RL DA F Sbjct: 292 DKDGKLLPHFIFVSNINPED-PTAIIEGNEKVVRPRLTDAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSR 392 F DL + L+ R+ RL+ V+F ++GT ++ +R Sbjct: 334 ---FKTDLKQRLEDRLPRLET--VLFQQQLGTLRDKTAR 367 >gi|213423815|ref|ZP_03356795.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 297 Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 107/323 (33%), Positives = 155/323 (47%), Gaps = 34/323 (10%) Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E +L +V ++ K+P PK MRW S ++RP+ ++ +L +K+I + Sbjct: 7 EALLPNMVATSLAKLPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVIPATI 56 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAV 239 I + GHRF + + D Y L E V+ D E R+ I DA A + Sbjct: 57 LGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKI 116 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G L Sbjct: 117 GGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGKL 176 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 FI V+NI++ D I+ GN +VV RL DA F FN Sbjct: 177 LPNFIFVANIESKD-PQQIISGNEKVVRPRLADAEFF--------------------FNT 215 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 D K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +LSK Sbjct: 216 DRKKRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSK 273 Query: 420 ADLCTEIVREFPELQGKIGKEYA 442 DL T +V EF + QG +G YA Sbjct: 274 CDLMTNMVFEFTDTQGVMGMHYA 296 >gi|163784109|ref|ZP_02179056.1| glycyl-tRNA synthetase subunit beta [Hydrogenivirga sp. 128-5-R1-1] gi|159880624|gb|EDP74181.1| glycyl-tRNA synthetase subunit beta [Hydrogenivirga sp. 128-5-R1-1] Length = 342 Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 109/339 (32%), Positives = 170/339 (50%), Gaps = 44/339 (12%) Query: 400 IAQLIDADVAL-----VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 IA LI ++ ++RA LSK DL TE+V+EF ELQG +G YA+ Q E A Sbjct: 11 IATLIAGEIGFNNINDLERANTLSKCDLLTEMVKEFDELQGIMGMHYALKQGEKEEVAKA 70 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 I EH P+ + +P I ++L+DKLDT+I+F +I EKP G+ DP+A+RRA +GI+R Sbjct: 71 IYEHYLPKTADDELPQTDIGSILALSDKLDTVISFLSIGEKPKGASDPFAVRRAAIGIVR 130 Query: 515 IILENKIDIPLSQFIE-------------------------DQNLI----LFFHDRLKLY 545 I++E IDI L + ++ D+N+I F R Y Sbjct: 131 ILVEKGIDIDLKKLLKEIEKNAKKSEILAFAKINSNWETPFDENVIPEVLEFIKGRFISY 190 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 + D+ D+I A++ ++ +L + IK + +F S + KR+ +I I EK Sbjct: 191 MKDKGYSTDIINAVVSTDDYSLYNLYLKIKTIQQFKKSEDFNDVMTVFKRVGKI--IPEK 248 Query: 606 KNREISLEISPQYLLL--EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 E S LL + EK+LY + + + +K Y + + L + I+ Sbjct: 249 ------FESSFNQTLLGKDEEKQLYKQYLTTKENFENDIKNKDYKKALESLLKLKPYIDE 302 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 FFD V+V V D +++NRLSLL+ I + + + KI Sbjct: 303 FFDNVMVMVKDENIKNNRLSLLKMINDTFKKIADFTKIT 341 >gi|302837349|ref|XP_002950234.1| hypothetical protein VOLCADRAFT_59982 [Volvox carteri f. nagariensis] gi|300264707|gb|EFJ48902.1| hypothetical protein VOLCADRAFT_59982 [Volvox carteri f. nagariensis] Length = 1069 Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 169/714 (23%), Positives = 296/714 (41%), Gaps = 66/714 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P A L + LL + + + ++ TP RL + ++GL+ Sbjct: 361 FVLEIGTEELPPDDVVSALNQLRERVPALLSKLRLTHGSVHVEGTPRRLAVVVEGLAARQ 420 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + GP G+ KA++GF R G+ + + D K + AV+R Sbjct: 421 ASEEAKVRGPPAKQAFSADGSPTKALEGFCRKNGVD-VGSVTREADAKGVEYVYAVVRDA 479 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL +P + + + KSMRW+ + S+ RP++ +L + + ++ Sbjct: 480 GRDAVEVLTDELPGLVGSLSFKKSMRWNGHGA-----SFSRPMRWLLAL-----HGDVVL 529 Query: 177 DLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + T R ++P P + V S + Y+ L A + L R AI D Sbjct: 530 PFVYGGLQAARTTRVLR-NSPAPELVVSSAETYLPALATAGIALSGSDRAEAIWRDVEAA 588 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWV-----------QVFMGSFDKKYLCLPEELIRLTIK 284 A+ VG GL F G E++ + ++ Sbjct: 589 AANVGRCPPILSPPSSPPCGLCNSTSPPFPPLPLPGHTFTGGTQHNTTQHDSEVLVMVMR 648 Query: 285 TNQKCFVTRTREG-VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 +Q+ F +G L FI V+N A + GN V+ AR EDA F++ D Sbjct: 649 KHQRYFPVFAPDGKSLLPYFITVANGPVDP--AVVAAGNEAVLRARFEDATFFYREDLKQ 706 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K S F DL LD+ + RL+ L +G V+ R + Sbjct: 707 PLEAFRPKLSGTTFQKDLGSLLDKAL-RLERL-------VGPLAAAVAAARPGQAAWGEA 758 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE---NISCCDAIEEHLK 460 +VA+ A L KADL T V E L G +G+ YA Q + + +AI E Sbjct: 759 GVLEVAV--EAARLCKADLATSTVTEMTALAGTMGRHYAYKQASCGLSAAVAEAIFEAAL 816 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P + + V+ AD+LD+L+ +A P+ + DPY LRRA G+++ ++ N Sbjct: 817 PRQAGDLLPASPAGVLVAAADRLDSLVGLFAAGCAPTAAADPYGLRRAAYGMLQTLVTNN 876 Query: 521 IDIPLSQF-----------IED---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 + + L + D +++ + + RL+ L D +++ A+L D+ Sbjct: 877 VGVSLRAAVAAAAALQPIAVSDAVQSDVLSYVNGRLEQLLGDGGAPAEVVRAVLGERGDD 936 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 ++ L + + + + + R +I + K+ + S+ + P E E++ Sbjct: 937 PALAAKTVEELKVWLRAGSLRRVMAAFSRPTRI--VRGKEVPDASVAVDPAVFEGEEERQ 994 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 LYA +D + ++ + + + I+ FFD+V V +D VR N Sbjct: 995 LYAAYTDARAKMSPAVSVSEWLAA---VEPLLPAIDRFFDKVFVMCEDAAVRAN 1045 >gi|213027175|ref|ZP_03341622.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 292 Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 151/325 (46%), Gaps = 34/325 (10%) Query: 138 PKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP 197 PK MRW S ++RP+ ++ +L +K+I + I + GHRF Sbjct: 1 PKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVIPATILGIQSDRVIRGHRFMGE 50 Query: 198 HPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGL 256 + + D Y L E V+ D E R+ I DA A +G + LLEE+ L Sbjct: 51 PEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASL 110 Query: 257 VEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGA 316 VEW V F++K+L +P E + T+K +QK F +G L FI V+NI++ D Sbjct: 111 VEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKD-PQ 169 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 I+ GN +VV RL DA F FN D K L+ + RL Sbjct: 170 QIISGNEKVVRPRLADAEFF--------------------FNTDRKKRLEDNLPRLQT-- 207 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 V+F ++GT ++ RI+ L IA+ I ADV RA +LSK DL T +V EF + QG Sbjct: 208 VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGV 267 Query: 437 IGKEYAVLQNENISCCDAIEEHLKP 461 +G YA E A+ E +P Sbjct: 268 MGMHYARHDGEAEDVAVALNEQYQP 292 >gi|254447347|ref|ZP_05060813.1| glycyl-tRNA synthetase beta subunit [gamma proteobacterium HTCC5015] gi|198262690|gb|EDY86969.1| glycyl-tRNA synthetase beta subunit [gamma proteobacterium HTCC5015] Length = 412 Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 101/349 (28%), Positives = 171/349 (48%), Gaps = 21/349 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + + S +I L+ + + + P RL L LK + Sbjct: 7 DLLIELGTEELPPKALKTLSNAFSASIIEQLETAQLKGEGSESFAAPRRLALLLKAVPEE 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +++ +R GP V G KA +GF RS G+ ++ + +D K +Y V +K Sbjct: 67 QGDQVIKRTGPAVQAAFDEDGNPTKAAEGFARSCGV-SVDEVSRIQDGKVEKLYYEV-QK 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L I+ A+ +P PK MRW + ++RP++ ++ + +++ Sbjct: 125 PGLSLSALLPEIIEKALTALPIPKRMRWGDND-----YQFVRPVQWLVTL-----HGDRV 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + +++ T GHRFHAP P+++ D Y L E V + RR I H Sbjct: 175 LPMEIMGQSASADTQGHRFHAPGPLRLTRADEYAAVLRERGKVEPSFDARRARIEEQVHA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + V D LL+E+ LVEW G F++++L +P+E + T++ NQK F Sbjct: 235 EAKALGGKAVIDPSLLDEVTALVEWPVAVAGHFEQRFLDVPQEALITTMEDNQKYFAVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 G L FI ++NI+ S + +GN RV+ R DA FW +D+ + Sbjct: 295 DNGQLMPHFITIANIE-SRNVKLLREGNERVIRPRFADAEFFWNQDRKH 342 >gi|206896274|ref|YP_002246853.1| glycyl-tRNA synthetase, beta subunit [Coprothermobacter proteolyticus DSM 5265] gi|206738891|gb|ACI17969.1| glycyl-tRNA synthetase, beta subunit [Coprothermobacter proteolyticus DSM 5265] Length = 669 Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 171/715 (23%), Positives = 330/715 (46%), Gaps = 83/715 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L E+ EE+P + + L K+ G+ ++ ++ + TP R L L GL P Sbjct: 2 DLLFELGFEEMPPSHLKALKQQVMERLEPTFKDYGLSFETVKTFLTPRRFALLLGGL-PE 60 Query: 63 SPEKIEERL-GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +E+ + GP G+ K A++ F++S G+ + + +I ++ K VY Sbjct: 61 KQAVVEKMIKGPPKSACYMPDGSIKPALEKFMQSNGVSS-DNIRIIEENGKSYVYAFKTE 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K E VL ++ + +PKSMRW + + RP++ I+ ++ ++ Sbjct: 120 GGKDACE-VLPALLEDLFTDLWFPKSMRWG------QGYVFGRPVRWIVALV-----DDQ 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAH 233 ++ ++L + ++ G R +++ HY + + E+ +++ D RR+ I N A Sbjct: 168 VLHIELFGVKSNRVSRGLRVFGSD-VEIDIPGHYEQLEKEKGLIIADENKRRDLIRNQAE 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +LA+ + + ++LLEE+ + E+ F+G F+ ++L LP++++ + +Q+ Sbjct: 227 KLAAELNGKPHLPEELLEELTFINEYPTGFVGHFEDRFLQLPKKVLETVMIHHQRYVAVE 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI N S+ ++ GN RV+ AR DAL F + Sbjct: 287 NEQGQLLPYFIGFRN-GPSENIQQVIVGNERVIRARFYDALFFVEE-------------- 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 DL P R+ L+ + F GT ++V+R+ K++ L + + L+ + Sbjct: 332 ------DLKTPFADRVQGLERIS--FLGNYGTLLDKVNRV----KRLLALFNKENDLLLQ 379 Query: 414 AIV-LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL-KPRGPLENVPTN 471 ++ L ADL T +V+E PEL G +G YA + IEE + +PR +EN Sbjct: 380 SLAELYNADLTTLMVQELPELHGYMGTFYAKRSGVEEPLANLIEEVVTEPR--VEN---- 433 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE-------NKIDIP 524 S + + D LDT+ + + PSGS DP L+ ++ +I + + + Sbjct: 434 --SAIIKVLDALDTIFAGFDMGFVPSGSSDPMGLKGLAFDVLDLICKFFPERSVKDLVLG 491 Query: 525 LSQFIEDQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD-LIKHLNE 579 + + +NL+ FF DRL ++ ++IR + AI+ D + + +++ L + Sbjct: 492 AASILGKENLVAAVEEFFLDRLDSWIECKEIR--VKNAIMDRALDKPIGMFPIMVEVLGQ 549 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F++ + L+ +RI I+ +N+E P + E + RL+ + G I Sbjct: 550 FWTGTMVQNIALAHRRIRNII-----RNQEAHASFDPA-IGSENDLRLHESFLNNGIRID 603 Query: 640 E--SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + ++ + L ++ + + +FD+ LV +D +VR NR++LL + N+ Sbjct: 604 SLNVVTKDGLMKVLEYLTALSDDVHEYFDKELVMAEDVKVRQNRVALLMAVDNLF 658 >gi|254282312|ref|ZP_04957280.1| glycyl-tRNA synthetase beta subunit [gamma proteobacterium NOR51-B] gi|219678515|gb|EED34864.1| glycyl-tRNA synthetase beta subunit [gamma proteobacterium NOR51-B] Length = 341 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 105/347 (30%), Positives = 173/347 (49%), Gaps = 22/347 (6%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L E+ +EE+PA Q +E L LI L G+ +++ R + TP RL + + GL + Sbjct: 6 LLFELGTEELPATAQGAMSESLHNHLIAALNSCGLDFEDSRFFATPRRLAVQIDGLLLEA 65 Query: 64 PEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E LGP + A + A +GF R G+ + + PK + L V + Sbjct: 66 PDVEREVLGPPIAASRDADGNWTPAAEGFARKQGV-PLDLLEAVATPKGERLGLKVT-EA 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 L +V+ +V A+ +P K MRW ++RP++ + + ++ Sbjct: 124 GVLAREVVPNLVAEAVAAIPVAKYMRWGRKRC-----EFLRPVQ-----WLVLLLDDTVL 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L L E+ + GHRFH P+ + + Y + L +A V+ D + RRN + N +A Sbjct: 174 PLSLFELEADRTSRGHRFHHPNNVAINHAKDYEKLLFQAKVIADFDTRRNVVANQVETVA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 VG ++ + DLL+E+ GLVEW G+FD+ +L +P+E + ++KT+QK F Sbjct: 234 E-VGTPVIAE-DLLDEVTGLVEWPIALAGTFDEAFLQVPQEALISSMKTHQKYFHLVDDS 291 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 G L FI V+NI++ D A ++ GN +V+ RL DA + RD+ Sbjct: 292 GALLPRFITVANIESKD-PAKVIAGNEKVIRPRLSDAAFLFDRDKKT 337 >gi|217032650|ref|ZP_03438137.1| hypothetical protein HPB128_19g11 [Helicobacter pylori B128] gi|216945660|gb|EEC24288.1| hypothetical protein HPB128_19g11 [Helicobacter pylori B128] Length = 408 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 129/446 (28%), Positives = 214/446 (47%), Gaps = 61/446 (13%) Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 +R +K +Q+ L N FI+VSN D I+ GN +V+ ARL DA+ F++ Sbjct: 1 MRFLVKKDQE------ESPTLHNGFIVVSNAINKDK-QKIILGNQKVLKARLSDAVFFYE 53 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 D L KPLD A L+ VVF +GT +++ R + + Sbjct: 54 ND--------------------LKKPLDN--APLER--VVFVQGLGTLKDKMERESTIAQ 89 Query: 399 KIAQL--------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENIS 450 + Q ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN Sbjct: 90 CLTQKYISSLNMPLEKALELVKRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENEL 149 Query: 451 CCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATL 510 +++E P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + Sbjct: 150 VALSVKEQYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSF 209 Query: 511 GIIRII----LENKIDIPLSQFIEDQNLILFFH-DRLKLYLHDR-----DIRHDLIEAIL 560 G+++II LE + L E + F + L+ +L +R D +I ++L Sbjct: 210 GLLKIIAHYGLEFDLKADLKSLFEKVGVYQSFDLEVLEKFLLERFHNLIDCNPSIIRSVL 269 Query: 561 RPENDNLLTIVDLIKHLNEFF---SSAKGEKFLLSAKRIFQILA-IEEKKNREISLEISP 616 +++ I+ +K L F +A+ ++ L SA F+ LA I + +N S S Sbjct: 270 NTNERDIVKIIQKVKALKRFLDDPKNARKKELLFSA---FKRLANINKDRNPNESSGFSI 326 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 E L+ + T E +D K + S+ P+E +F VLV D E Sbjct: 327 SLFKEPEEHALFEAFNAIKTSAFEGLDSKI-----EAYFSLHAPLEEYFKSVLVMDKDIE 381 Query: 677 VRDNRLSLLQYIKNIILIVINVQKIV 702 ++ NR + L + L + ++++I Sbjct: 382 IQKNRKNFLWGVYQSFLEIGDIKEIA 407 >gi|3122890|sp|O30836|SYGB_HAEAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|2394404|gb|AAB70306.1| glycyl-tRNA-synthetase [Haemophilus influenzae biotype aegyptius] Length = 285 Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 83/285 (29%), Positives = 141/285 (49%), Gaps = 19/285 (6%) Query: 429 EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLIN 488 EF + QG +G YA E+ A+ E PR + +P + ++ V+LADK DTL Sbjct: 1 EFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVASAVALADKFDTLTG 60 Query: 489 FWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-----------DQNLIL- 536 + I + P GS DP+ALRRA LG +RII+E + + L ++ +QN++ Sbjct: 61 IFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAALFGDKLANQNVVAD 120 Query: 537 ---FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA 593 F R + + D I D+I+A+L ++ ++ F + E + Sbjct: 121 VVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAAN 180 Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KR+ ILA + EI+L + + +AEK L + T +Q ++ Y + D Sbjct: 181 KRVSNILAKADAAIGEINLTVCVE----QAEKALAEAVLALRTEVQPLIEQGDYTTVLDK 236 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 237 LANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADI 281 >gi|1780765|emb|CAA71457.1| unnamed protein product [Coxiella burnetii] Length = 255 Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 147/288 (51%), Gaps = 35/288 (12%) Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 MRW H ++RP+ I+ +L + ++ K C T GHRFH P I Sbjct: 1 MRWGD-HKEF----FVRPVHWIILMLGKDLVPATLLG---KMASCE--TRGHRFHHPKNI 50 Query: 201 KVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEW 259 V D Y + L MV+ D E RR I + + AS G E + D+ LLEE+ G+VEW Sbjct: 51 LVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQKAASEKG-EAIIDEGLLEEVTGMVEW 109 Query: 260 VQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIV 319 + +G+F ++L LP E++ T+K +Q+ F + + G L FI+VSNI++ + IV Sbjct: 110 PVILVGNFKAEFLKLPPEVLITTMKVHQRTFPIKNKNGDLLPYFIIVSNIESKNPKRVIV 169 Query: 320 QGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVF 379 GN RV+ ARL DA F ++ DL L+ R+ +L DV+F Sbjct: 170 -GNERVINARLADASFF--------------------YDNDLRTSLENRLPKLG--DVIF 206 Query: 380 HAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIV 427 ++GT ++ RI L IA+ I+ D L RA +LSK DL +E+V Sbjct: 207 QRQLGTLADKARRIEKLAAFIAKQINIDEQLAARAGLLSKCDLVSEMV 254 >gi|289805923|ref|ZP_06536552.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 336 Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 94/328 (28%), Positives = 152/328 (46%), Gaps = 21/328 (6%) Query: 22 AEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV------ 75 AE + L G+ + ++ + P RL L + L+ P++ E+ GP + Sbjct: 16 AESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDA 75 Query: 76 -GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQK 134 G KA +G+ R G+ ++ D + +Y A ++ E +L +V ++ K Sbjct: 76 EGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAYVKGES--TEALLPNMVATSLAK 133 Query: 135 VPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRF 194 +P PK MRW S ++RP+ ++ +L +K+I + I + GHRF Sbjct: 134 LPIPKLMRWGA-----SDVHFVRPVHTVTLLL-----GDKVIPATILGIQSDRVIRGHRF 183 Query: 195 HAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEI 253 + + D Y L E V+ D E R+ I DA A +G + LLEE+ Sbjct: 184 MGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEV 243 Query: 254 IGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASD 313 LVEW V F++K+L +P E + T+K +QK F +G L FI V+NI++ D Sbjct: 244 ASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKD 303 Query: 314 GGAAIVQGNSRVVAARLEDALHFWKRDQ 341 I+ GN +VV RL DA F+ D+ Sbjct: 304 -PQQIISGNEKVVRPRLADAEFFFNTDR 330 >gi|291533031|emb|CBL06144.1| Glycyl-tRNA synthetase, beta subunit [Megamonas hypermegale ART12/1] Length = 291 Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 24/278 (8%) Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF ELQG +G+EYA+L E AI EH PR + P + VSLADK+D Sbjct: 1 MVCEFTELQGIMGREYALLDGEGQEVATAIYEHYMPRFAGDAEPASVAGRLVSLADKMDN 60 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------- 530 ++ ++ P+GS+DP+ALRR LGI+ I+E I +S+ + Sbjct: 61 IVATFSRGLVPTGSQDPFALRRQALGIVHTIIEANYTISISEIADKAMDLLNITDSEKRA 120 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +N+ FF RLK L D D+R+D+I+A+L ++ T E S + Sbjct: 121 EIQKNVAEFFTLRLKNVLGDNDVRYDIIDAVLENADEVAGTYAKACVTAQEIASGVLND- 179 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + ++ I +K + I+ L+ EK LY ++ ++++K Y Sbjct: 180 ---AIQAFVRVGNISKKAENNV---INEALFTLDEEKALYNTYVAVAKDVETALNNKDYK 233 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 D + + PI FFD V+V D ++++NRL+LL+ Sbjct: 234 TAIDKMQELTAPINNFFDNVMVMDKDEQIKNNRLALLK 271 >gi|28493467|ref|NP_787628.1| glycyl-tRNA synthetase alpha chain and beta chain [Tropheryma whipplei str. Twist] gi|28476508|gb|AAO44597.1| glycyl-tRNA synthetase alpha chain and beta chain [Tropheryma whipplei str. Twist] Length = 1024 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 131/546 (23%), Positives = 241/546 (44%), Gaps = 68/546 (12%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQY---WTPHRLFLYLKGLSP 61 L EI +EE+P+ E ++ + L ++ G +Y TP R+ + + + P Sbjct: 321 LFEIGTEEMPS-----TQEIITTVENTLREKLGRSQLKFEKYSVDATPRRIVIRIYKMHP 375 Query: 62 HSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + GP+V A A+ GFL++ G +++ + +I + V++ Sbjct: 376 RQSDSSVRIRGPKVEAAFDDDKKPTDALTGFLKANG-KSLDEIEIAVHKNRRHVFI-TKN 433 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L+ I + ++ ++MRW + P FS RP++ ++ + ++ Sbjct: 434 IPGQSAAKLLEQIFAEIVLEIRSSRNMRW---NDPKLVFS--RPIRWLVALY-----GQR 483 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + + G T R + V++ D+Y L V+L RR I A+ Sbjct: 484 QLNIRVSLLESGMHTRVLRNSKTPIVPVKAADNYEEFLTRNGVILSRSKRREIIFESANL 543 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT------NQK 288 A +V E+ +EEI LVE + + F+KKYL LPE ++ +K ++K Sbjct: 544 AAKSVSCEIDFSTQPIEEITDLVEAPSLVICRFEKKYLELPEVVLNAIMKKQKYITLSEK 603 Query: 289 CFVTR------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 C + + ++ FI +N + GN V+ R EDAL F + D Sbjct: 604 CATCKRIQREKCDQKTISQHFITFANGLCDK--ETVRSGNEAVIRTRFEDALFFQEADSK 661 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 P +L K LD +V+ K+G+ ++ RI+ + ++ Sbjct: 662 LSPE-------------NLYKMLD---------GLVYEEKLGSYLQKSQRIQRITDELLA 699 Query: 403 LIDADVALVDRA---IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 L+ AD L + A ++K DL +++V E PEL G + K YA + A+E+ Sbjct: 700 LMKADKNLSNTARQSAAIAKFDLASQMVTEMPELSGFMAKIYAQRAGKPPEVAQALEDME 759 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI--IL 517 PR +++P + +S+AD+LD L+ A+ +GS D + +RR G++ I +L Sbjct: 760 APRSAGKSLPVTQAGAILSIADRLDQLVAMTALGITSTGSSDLFGVRRTASGLVDILRVL 819 Query: 518 ENKIDI 523 K D+ Sbjct: 820 PQKYDL 825 >gi|28572421|ref|NP_789201.1| glycyl-tRNA synthetase [Tropheryma whipplei TW08/27] gi|28410552|emb|CAD66938.1| glycyl-tRNA synthetase [Tropheryma whipplei TW08/27] Length = 1024 Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 131/546 (23%), Positives = 241/546 (44%), Gaps = 68/546 (12%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQY---WTPHRLFLYLKGLSP 61 L EI +EE+P+ E ++ + L ++ G +Y TP R+ + + + P Sbjct: 321 LFEIGTEEMPS-----TQEIITTVENTLREKLGRSQLKFEKYSVDATPRRIVIRIYKMHP 375 Query: 62 HSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + GP+V A A+ GFL++ G +++ + +I + V++ Sbjct: 376 RQSDSSVRIRGPKVEAAFDDDKKPTDALTGFLKANG-KSLDEIEIAVHKNRRHVFI-TKN 433 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L+ I + ++ ++MRW + P FS RP++ ++ + ++ Sbjct: 434 IPGQSAAKLLEQIFAEIVLEIRSSRNMRW---NDPKLVFS--RPIRWLVALY-----GQR 483 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + + G T R + V++ D+Y L V+L RR I A+ Sbjct: 484 QLNVRVSLLESGMHTRVLRNSKTPIVPVKAADNYEEFLTRNGVILSRSKRREIIFESANL 543 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT------NQK 288 A +V E+ +EEI LVE + + F+KKYL LPE ++ +K ++K Sbjct: 544 AAKSVSCEIDFSTQPIEEITDLVEAPSLVICRFEKKYLELPEVVLNAIMKKQKYITLSEK 603 Query: 289 CFVTR------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 C + + ++ FI +N + GN V+ R EDAL F + D Sbjct: 604 CATCKRIQREKCDQKTISQHFITFANGLCDK--ETVRSGNEAVIRTRFEDALFFQEADSK 661 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 P +L K LD +V+ K+G+ ++ RI+ + ++ Sbjct: 662 LSPE-------------NLYKMLD---------GLVYEEKLGSYLQKSQRIQRITDELLA 699 Query: 403 LIDADVALVDRA---IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 L+ AD L + A ++K DL +++V E PEL G + K YA + A+E+ Sbjct: 700 LMKADKNLSNTARQSAAIAKFDLASQMVTEMPELSGFMAKIYAQRAGKPPEVAQALEDME 759 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI--IL 517 PR +++P + +S+AD+LD L+ A+ +GS D + +RR G++ I +L Sbjct: 760 APRSAGKSLPVTQAGAILSIADRLDQLVAMTALGITSTGSSDLFGVRRTASGLVDILRVL 819 Query: 518 ENKIDI 523 K D+ Sbjct: 820 PQKYDL 825 >gi|157850888|gb|ABV90251.1| glycyl-tRNA synthetase beta subunit [Bacillus subtilis subsp. sadata] Length = 268 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/272 (27%), Positives = 137/272 (50%), Gaps = 12/272 (4%) Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G++YA + E+ + A+ EH PR P+ V++ADKLDT+ +F++I P Sbjct: 1 MGEKYARMLGEDEAVAAAVNEHYMPRSAGGETPSTFTGAVVAMADKLDTITSFFSIGVIP 60 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFI------EDQNLILFFHDRLKLYLHDRD 550 +GS+DPY LRR GI+ I+L+ I + + ++ L+ FF RLK L+ Sbjct: 61 TGSQDPYGLRRQASGIVAILLDRNWGISFEELLTFVQTDKENELLDFFTQRLKYVLNAEQ 120 Query: 551 IRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI 610 IRHD+I+A+L + + + L + + F +A+ + ++++I +K R Sbjct: 121 IRHDVIDAVLESSELEPYSALHKAQVLEQKLGAP---GFKETAEALGRVISISKKGVRG- 176 Query: 611 SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 +I P E E +L+ ++QE+ K Y L ++ EPI+ +FD +V Sbjct: 177 --DIQPDLFENEYEAKLFDAYQTAKQNLQENFSKKDYEAALASLAALKEPIDAYFDHTMV 234 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D+ ++ NRL+ + + + I N+ ++ Sbjct: 235 IADNESLKANRLAQMVSLADEIKSFANMNALI 266 >gi|34763772|ref|ZP_00144688.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886448|gb|EAA23707.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 227 Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 127/242 (52%), Gaps = 28/242 (11%) Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 +++K +Q+ F +++G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 4 ISMKVHQRYFPVLSKKGKLLPKFIVIRN--GIDFSENVKKGNEKVLSARLADARFFYYED 61 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 L PLD + +L VVF +GT ++V R + + + Sbjct: 62 --------------------LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFL 99 Query: 401 AQLIDADVALVD--RAIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIE 456 + + + D R + L+KADL + ++ +EF +LQG +G+ YA+ E I I+ Sbjct: 100 VEKLKYNYMKEDILRTVKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIK 159 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH PR + +P+ I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II Sbjct: 160 EHYYPRFQGDLLPSGIEGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNII 219 Query: 517 LE 518 ++ Sbjct: 220 IK 221 >gi|169824435|ref|YP_001692046.1| glycyl-tRNA synthetase subunit beta [Finegoldia magna ATCC 29328] gi|167831240|dbj|BAG08156.1| glycyl-tRNA synthetase beta subunit [Finegoldia magna ATCC 29328] Length = 562 Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 106/444 (23%), Positives = 199/444 (44%), Gaps = 67/444 (15%) Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 +Y+ + K +ED +TI+ AI + + ++ H +S +SIL I + Sbjct: 54 IYVTSIENTKYTLED-YETIIINAIDSINF----KYKYNHESLSF------KESILQIKI 102 Query: 168 AEDAKEKIIDL-DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM----VLLDPE 222 + + K I+ D+ E + F+ D A+ ++L + Sbjct: 103 FNEEQHKTINFNDVDENKNNELVNSSTFN---------------DFSSALLKNEIILKKD 147 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 R + A++LA A G ++ +K ++ E ++ GSFD+KYLC+ + ++ Sbjct: 148 QRLESFEKSANKLARANGCSIINNKSIMNEYANKFDYPVSVEGSFDEKYLCIDKSILYTV 207 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 + N K G +N F+ N + D SRV+ A + + L + N Sbjct: 208 LMENFKVLPMEFENGNSSNFFVYAKNKNSED---------SRVLCAEINNKL----EEIN 254 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARL--DMLDVVFHAKIGTQGERVSRIRVLGKKI 400 NL ++K D+++ D+ +V + G ++ R+ + ++ Sbjct: 255 NL----------------ITKKSDKKLEDFVEDLKNVTYINNYGNFYDKTQRLIKISPEL 298 Query: 401 AQLI---DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 +++ + V V+R L KAD TEIV++ P L G IG+ YA E D + E Sbjct: 299 CKMLSVSEETVNSVNRISFLCKADKATEIVKKCPYLHGLIGRLYAKSDGEENIVYDGVYE 358 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H+KPR E++P + + V+++DK++ +++ + I+ K Y LR+ +I IIL Sbjct: 359 HIKPRFISESIPNSTAARIVAISDKMEYVMS-YIISSSDENFKYNYKLRKTITSVISIIL 417 Query: 518 ENKIDIPLSQFIEDQNLILFFHDR 541 ++++D LS FI + L +F D+ Sbjct: 418 KSELDFNLSDFIT-KILYVFLQDK 440 >gi|303233802|ref|ZP_07320456.1| glycine--tRNA ligase, beta subunit [Finegoldia magna BVS033A4] gi|302495236|gb|EFL54988.1| glycine--tRNA ligase, beta subunit [Finegoldia magna BVS033A4] Length = 562 Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 104/440 (23%), Positives = 200/440 (45%), Gaps = 59/440 (13%) Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 +Y+ + K +ED +TI+ AI + + ++ H +S +SIL I + Sbjct: 54 IYVTSIENTKYTLED-YETIIINAIDSINF----KYKYNHESLSF------KESILQIKI 102 Query: 168 AEDAKEKIIDL-DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 + + K I+ D+ E + + + + + L + ++L + R Sbjct: 103 FNEEQHKTINFNDVDENKNNEL-----------VNSSTFNDFSSALLKNEIILKKDQRLE 151 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 + A++LA A G ++ +K ++ E ++ GSFD+KYLC+ + ++ + N Sbjct: 152 SFEKSANKLARANGCSIINNKSIMNEYANKFDYPVSVEGSFDEKYLCIDKSILYTVLMEN 211 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 K G +N F+ N + D SRV+ A + + L + NNL Sbjct: 212 FKVLPMEFENGNSSNFFVYAKNKNSED---------SRVLCAEINNKL----EEINNL-- 256 Query: 347 LSSLKESALKFNLDLSKPLDQRMARL--DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 ++K D+++ D+ +V + G ++ R+ + ++ +++ Sbjct: 257 --------------ITKKSDKKLEDFVEDLKNVTYINNYGNFYDKTQRLIKISPELCKML 302 Query: 405 ---DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + V V+R L KAD TEIV++ P L G IG+ YA E D + EH+KP Sbjct: 303 SVSEETVNSVNRISFLCKADKATEIVKKCPYLHGLIGRLYAKSDGEEKIVYDGVYEHIKP 362 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R E++P + + V+++DK++ +++ + I+ K Y LR+ +I IIL++++ Sbjct: 363 RFISESIPNSTAARIVAISDKMEYVMS-YIISSSDENFKYNYKLRKTITSVISIILKSEL 421 Query: 522 DIPLSQFIEDQNLILFFHDR 541 D LS FI + L +F D+ Sbjct: 422 DFNLSDFIT-KILYVFLQDK 440 >gi|110589424|gb|ABG77221.1| glycyl-tRNA synthetase beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 238 Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 18/190 (9%) Query: 385 TQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVL 444 T ERV+ + + IA+ I AD V RA +LS+ DL TE+V EFPE+QG +G+ A Sbjct: 37 TNRERVADLAIY---IAEQIGADQERVRRAGLLSRCDLMTEMVYEFPEMQGIMGRYQAQR 93 Query: 445 QNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYA 504 E+ A++E PR + +P ++ I ++LA+++DTL+ + I KP+G KDP+A Sbjct: 94 DGEDAELAQAMDEFYMPRFSGDQLPQSQTGIAIALAERIDTLVGIFGIGMKPTGDKDPFA 153 Query: 505 LRRATLGIIRIILENKIDIPLSQF-----------IEDQNLILFFHD----RLKLYLHDR 549 LRRA LG IRI+ E+ + + L IE + I+ +D RLK ++ Sbjct: 154 LRRAALGAIRIMSEHSLSVNLPDLIANSAELLADKIEQNDTIVLVYDFIIERLKGVCLEQ 213 Query: 550 DIRHDLIEAI 559 I D +A+ Sbjct: 214 GISSDQFQAV 223 >gi|302380525|ref|ZP_07268990.1| glycine--tRNA ligase, beta subunit [Finegoldia magna ACS-171-V-Col3] gi|302311468|gb|EFK93484.1| glycine--tRNA ligase, beta subunit [Finegoldia magna ACS-171-V-Col3] Length = 562 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 85/330 (25%), Positives = 158/330 (47%), Gaps = 36/330 (10%) Query: 217 VLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPE 276 ++L + R + A++LA A G ++ +K ++ E ++ GSFD+KYLC+ + Sbjct: 142 IILKKDQRLESFEKSANKLARANGCSIINNKSIMNEYANKFDYPVSVEGSFDEKYLCIDK 201 Query: 277 ELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHF 336 ++ + N K G +N F+ N + D SRV+ A + + L Sbjct: 202 SILYTVLMENFKVLPMEFENGNSSNFFVYAKNKNSED---------SRVLCAEINNKLE- 251 Query: 337 WKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL--DMLDVVFHAKIGTQGERVSRIR 394 + NNL ++K D+++ D+ +V + G ++ R+ Sbjct: 252 ---EINNL----------------ITKKSDKKLEDFVEDLKNVTYINNYGNFYDKTQRLI 292 Query: 395 VLGKKIAQLI---DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 + ++ +++ + V V+R L KAD TEIV++ P L G IG+ YA E Sbjct: 293 KISPELCKMLSVSEETVNSVNRISFLCKADKATEIVKKCPYLHGLIGRLYAKSDGEEKIV 352 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 D + EH+KPR E++P + + V+++DK++ +++ + I+ K Y LR+ Sbjct: 353 YDGVYEHIKPRFISESIPNSTAARIVAISDKMEYVMS-YIISSSDENFKYNYKLRKTITS 411 Query: 512 IIRIILENKIDIPLSQFIEDQNLILFFHDR 541 +I IIL++++D LS FI + L +F D+ Sbjct: 412 VISIILKSELDFNLSDFIT-KILYVFLQDK 440 >gi|167950241|ref|ZP_02537315.1| Glycine--tRNA ligase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 219 Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 18/190 (9%) Query: 385 TQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVL 444 T ERV+ + + IA+ I AD V RA +LS+ DL TE+V EFPE+QG +G+ A Sbjct: 18 TNRERVADLAIY---IAEQIGADQERVRRAGLLSRCDLMTEMVYEFPEMQGIMGRYQAQR 74 Query: 445 QNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYA 504 E+ A++E PR + +P ++ I ++LA+++DTL+ + I KP+G KDP+A Sbjct: 75 DGEDAELAQAMDEFYMPRFSGDQLPQSQTGIAIALAERIDTLVGIFGIGMKPTGDKDPFA 134 Query: 505 LRRATLGIIRIILENKIDIPLSQF-----------IEDQNLILFFHD----RLKLYLHDR 549 LRRA LG IRI+ E+ + + L IE + I+ +D RLK ++ Sbjct: 135 LRRAALGAIRIMSEHSLSVNLPDLIANSAELLADKIEQNDTIVLVYDFIIERLKGVCLEQ 194 Query: 550 DIRHDLIEAI 559 I D +A+ Sbjct: 195 GISSDQFQAV 204 >gi|254447445|ref|ZP_05060911.1| glycyl-tRNA synthetase [gamma proteobacterium HTCC5015] gi|198262788|gb|EDY87067.1| glycyl-tRNA synthetase [gamma proteobacterium HTCC5015] Length = 290 Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 85/299 (28%), Positives = 137/299 (45%), Gaps = 34/299 (11%) Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF +QG G+ YA E A+EE +P+ + +P + ++LAD+LDT Sbjct: 1 MVLEFDSMQGIAGRYYAEHDGEPGDVAAALEEQYRPKFAGDQLPQSDSGRALALADRLDT 60 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI---------------PLSQFIE 530 L+ W ++P+GSKDP+ALRRA LG++RI+ E +D+ L Sbjct: 61 LVGIWTAGKQPTGSKDPFALRRAALGVLRILGETPLDLDLDALLDATIAGYPPELDAASN 120 Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPENDNLLTIVDLIKHLN--EFFSS 583 L+ FF +R K+ DR EA RP DL+K L+ + FS Sbjct: 121 KAALLDFFRERFKVLCLDRGYSRLQFEAAASVGYSRP--------ADLLKRLHAVQLFSE 172 Query: 584 AKGEKFLLSA-KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 L +A KRI I +K + + + E EK L+ + Q + Sbjct: 173 LDASDSLSAADKRIRNIF---KKIDANVLNNVDASLFEDELEKNLHQTLIKLQESSQLCI 229 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + Y L + P++ FFD V+V +D +R NRL+LL ++ + L + ++ ++ Sbjct: 230 ERSDYETALKTLAELKAPVDAFFDGVMVMAEDEALRQNRLALLAQLRGLFLQIADLSQL 288 >gi|322515764|ref|ZP_08068716.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] gi|322118136|gb|EFX90477.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] Length = 207 Score = 108 bits (271), Expect = 3e-21, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 17/184 (9%) Query: 396 LGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 L +IA I AD A +RA +LSK DL T +V EF + QG +G YA E+ A+ Sbjct: 3 LAGEIAAQIGADKAKAERAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVAL 62 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 E PR + +P + ++ +V+LADK DTL + I + P GS DP+ALRRA LG +RI Sbjct: 63 NEQYMPRFAGDELPKSLVACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRI 122 Query: 516 ILENKIDIPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL 560 I+E + + L + ++++ F R + + D I D+I+A+L Sbjct: 123 IVEKNLPLDLEDLVRKSAALFGDKLINANVVEDVVGFMLGRFRAWYQDEGIAVDVIQAVL 182 Query: 561 --RP 562 RP Sbjct: 183 ARRP 186 >gi|255030754|ref|ZP_05302705.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes LO28] Length = 279 Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 27/277 (9%) Query: 33 LKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP-------RVGAGKKAIDGF 85 L E + + ++ Y TP RL + ++G++ ++EE GP G KA GF Sbjct: 18 LTENKIEFGEIKTYSTPRRLTVLVEGMAEEQANRVEEAKGPAKKIALDEEGNWSKAALGF 77 Query: 86 LRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPV---AIQKVPWPKSMR 142 +S Q + + KG Y+ + K +I + T++P + + +P SM Sbjct: 78 AKS---QKVDPADLTFRDIKGVEYIYI---KKEVIGEKTSTLLPSLEKVVTSMTFPVSMH 131 Query: 143 WSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKV 202 W + +IRP+K ++ + E+II ++ + N + GHRF Sbjct: 132 WGSND-----LRYIRPIKWLIAMF-----DEEIIPFEITGVTTSNTSRGHRFLGKSATIK 181 Query: 203 QSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQV 262 Q D Y L E V+++ E R+ AI+ L S ++ ED DLLEE+ LVE+ V Sbjct: 182 QPSD-YPNALLEQFVVVNAEERKQAIVEQLRELESMENWQIKEDDDLLEEVTNLVEYPTV 240 Query: 263 FMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G+F+K+YL LPEE++ T+K +Q+ F ++ G L Sbjct: 241 LSGNFEKEYLELPEEVLITTMKEHQRYFPVFSQAGEL 277 >gi|289804684|ref|ZP_06535313.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 278 Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 26/281 (9%) Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G YA E A+ E +PR +++P+N ++ +++ADK+DTL + I + P Sbjct: 1 MGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHP 60 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILFFHDR 541 G KDP+ALRRA LG++RII+E +++ L E+ ++I F R Sbjct: 61 KGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNASVVDDVIDFMLGR 120 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 + + D D I+A+L +K ++ F + + + KR+ ILA Sbjct: 121 FRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHFRTLEEASALAAANKRVSNILA 180 Query: 602 IEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 K E +I +L EA + R V+ D +Q RY + L ++ Sbjct: 181 ----KATEPLNDIVHASVLKEAAEIELARHLVVLRD---KLQPYFADGRYQEALIELAAL 233 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 P++ FF+ V+VN +++++R NRL+LL ++ + L V ++ Sbjct: 234 RAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVADI 274 >gi|213416947|ref|ZP_03350091.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 279 Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 18/277 (6%) Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G YA E A+ E +PR +++P+N ++ +++ADK+DTL + I + P Sbjct: 2 MGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHP 61 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILFFHDR 541 G KDP+ALRRA LG++RII+E +++ L E+ ++I F R Sbjct: 62 KGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNASVVDDVIDFMLGR 121 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 + + D D I+A+L +K ++ F + + + KR+ ILA Sbjct: 122 FRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHFRTLEEASALAAANKRVSNILA 181 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 K ++ + L AE L + +Q RY + L ++ P+ Sbjct: 182 ---KATEPLNDIVHASVLKEAAEIELARHLVVLRDKLQPYFADGRYQEALIELAALRAPV 238 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + FF+ V+VN +++++R NRL+LL ++ + L V ++ Sbjct: 239 DEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVADI 275 >gi|329920070|ref|ZP_08276901.1| putative glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] gi|328936524|gb|EGG32968.1| putative glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] Length = 290 Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 31/298 (10%) Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF ELQG +G YA L E + AI+E P ++PT KI +S+ADKLDT Sbjct: 1 MVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTTKIGSLLSIADKLDT 60 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--------- 536 +I F+ P+ S DPYALRR+ GI+RI++ +I + ++D +L Sbjct: 61 IIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDIIALLKGKTVAKLP 120 Query: 537 -----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 F +R+K L + +D+I+ +L N+ I+ + L E +K Sbjct: 121 NDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILSIADILQENHDDSK 180 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 +K + S RI IL +K + + +I+P +EK LY I+ + +S+D K Sbjct: 181 FKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKIN---LLLDKSLDVK 234 Query: 646 R-YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + L I E +FD ++ + V+ NRLS L+ I + L ++ K+V Sbjct: 235 TLYSEFVQLQPVIDE----YFDSNMILDKNEAVKINRLSQLKLIDKLALEFGDLSKLV 288 >gi|217032651|ref|ZP_03438138.1| hypothetical protein HPB128_19g12 [Helicobacter pylori B128] gi|216945661|gb|EEC24289.1| hypothetical protein HPB128_19g12 [Helicobacter pylori B128] Length = 316 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 87/306 (28%), Positives = 145/306 (47%), Gaps = 22/306 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K+ +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IH-AKQPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLFN---G 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E +++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNGIEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQ 234 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 235 EIKELETKHHIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYF 294 Query: 291 VTRTRE 296 +++ Sbjct: 295 AVFSQK 300 >gi|222873658|gb|EEF10789.1| predicted protein [Populus trichocarpa] Length = 245 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 47/218 (21%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAIL---RP-------------------------- 562 ++L+ FFHDRLK+YL D+ RHDLI+A+L RP Sbjct: 27 EDLLSFFHDRLKVYLRDQGARHDLIDAVLASGRPISPLEGEMSPKATEGGAVPPTSQSVT 86 Query: 563 ------------------ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 ND+LL IV ++ L++ + G+ L KR ILA EE Sbjct: 87 PPSALPGISPSRGEITPSSNDDLLLIVRRVEALSDLLGTETGQNLLAGTKRAANILAAEE 146 Query: 605 KKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 KK I+ + P L E E RL++ ++ E++ + + L ++ EPI+ F Sbjct: 147 KKGTRIAEAVDPALLKEEQEIRLFSAVNQAEKEAGEAIQKQDFSAAMTALAALREPIDSF 206 Query: 665 FDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 F++VLVN ++ +R NRL+LLQ I+ V + KI Sbjct: 207 FEKVLVNDENDSIRANRLALLQRIREATGRVADFSKIA 244 >gi|297588414|ref|ZP_06947057.1| glycyl-tRNA synthetase beta subunit [Finegoldia magna ATCC 53516] gi|297573787|gb|EFH92508.1| glycyl-tRNA synthetase beta subunit [Finegoldia magna ATCC 53516] Length = 562 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 100/440 (22%), Positives = 195/440 (44%), Gaps = 59/440 (13%) Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 +Y+ L P +ED + ++ AI + + +++ +S +SIL I + Sbjct: 54 IYITNLENPGYTLED-YENVINKAIDSINF----KYNYDSESLSF------RESILYIKI 102 Query: 168 AEDAKEKIIDLD-LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 + + K I+ LKE ++ + + +++ +L + ++L R Sbjct: 103 FNEKENKTIEFKGLKEDKDDSL-----------VNSSTFNNFSSELRKNQIILKKGERLQ 151 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 + A++LA A G ++ +K +L E ++ GSFD+K+LC+ + ++ + N Sbjct: 152 SFEKSANKLARANGCSIINNKSILNEYANKFDYPVSVEGSFDEKFLCIDKSILYTVLMEN 211 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 K G +N F+ N + D S V+ + D L + +NL N Sbjct: 212 FKVLPMEFDNGNSSNFFVYAKNKSSED---------SHVLIKEINDKLE----EIDNLIN 258 Query: 347 LSSLKESALKFNLDLSKPLDQRMARL--DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 S D+++ D+ V + G ++ R+ + ++ +++ Sbjct: 259 QKS----------------DRKLEDFVEDLKTVNYINNYGNFYDKTQRLIKISIELCKML 302 Query: 405 DADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 +D R L KAD TEIV++ L G IG+ YA E+ + + EH+KP Sbjct: 303 SVSQETIDSVRRIAFLCKADKATEIVQKCSYLHGLIGRLYAKSDGEDKIVYEGVYEHIKP 362 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R EN+P + + V+++DK++ +++ + I+ K Y LR+ +I IIL++++ Sbjct: 363 RFISENIPNSTAARIVAISDKMEYVMS-YIISSSDDNFKYNYKLRKTITSVISIILKSEL 421 Query: 522 DIPLSQFIEDQNLILFFHDR 541 D LS FI + L +F D+ Sbjct: 422 DFNLSDFIT-KILYVFLQDK 440 >gi|167010541|ref|ZP_02275472.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica FSC200] Length = 233 Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 125/239 (52%), Gaps = 18/239 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 7 DFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAES 66 Query: 63 SPEKIEERLGPRVGAGKKAID------GFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + + E+ GP V K + GF +S G++ + + + PK ++ ++ Sbjct: 67 QQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVE-LDELERVATPKGDKLFYKTVQSG 125 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + + ++L+ I+ A++++P K MRW + S+ ++RP+ +L L D ++ Sbjct: 126 QATV-NLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLA-LYGND----VV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 D+++ NITYGHRFH P I + ++ YI+ L +AMV+ + + R+ ++ A + Sbjct: 175 DIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIGNWQQRKQMLVEQAENI 233 >gi|47679391|gb|AAT36676.1| glycyl-tRNA synthetase [Oenococcus oeni PSU-1] Length = 248 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/257 (30%), Positives = 131/257 (50%), Gaps = 36/257 (14%) Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI- 529 +K+ ++LADKLDTL +F+A PSGS DPY LRRA LGI+RII + K + +S+ + Sbjct: 1 SKVGAMLALADKLDTLFSFFAAGIIPSGSNDPYGLRRAALGIVRIIGQQKWNFSVSKLLH 60 Query: 530 ---------ED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 ED + +I FF DR++ DIR+DL++A N+ + Sbjct: 61 SLKTAVDKHEDGFLIDFADTKEISRKVIEFFLDRIR--QQSSDIRYDLLDASTGKVNEGI 118 Query: 568 LTIVDLIKHLNEFFSSAKGEKF--LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 + + K + S F ++ A Q LA + K N +EI P+ + +EK Sbjct: 119 INYI--FKRVRILASHVADPDFRDVIEALTRVQNLAEKNKSN----VEIDPELFVTNSEK 172 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 RLY + D + S K H + L S+ EPI +FD+ ++ + +++NR++ + Sbjct: 173 RLYQLTKDKDPIVLLS---KGDHTVYQFLASLKEPINNYFDENMIMDKNPIIKNNRVAQI 229 Query: 686 QYIKNIILIVINVQKIV 702 + N+I + +++K+V Sbjct: 230 NLLNNLISSLGDLRKVV 246 >gi|312906134|ref|ZP_07765146.1| glycyl-tRNA synthetase subunit beta domain protein [Enterococcus faecalis DAPTO 512] gi|310627780|gb|EFQ11063.1| glycyl-tRNA synthetase subunit beta domain protein [Enterococcus faecalis DAPTO 512] Length = 253 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 34/251 (13%) Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII----------- 516 +P I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII Sbjct: 1 MPETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQ 60 Query: 517 LENKIDIPLSQFIEDQNLIL---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 L+ ++D ++Q +E ++L F RL+ L +++RHD+I+A++ E +L Sbjct: 61 LQTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADL 120 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE----ISPQYLLLEA 623 L N S + + F S + + +++ + KK +E+ + I P +A Sbjct: 121 ---SKLFASANILKSRFEDQDFKPSMEALTRVINL-AKKGQELLGDTEEGIDPSLFENKA 176 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP-IEIFFDQVLVNVDDREVRDNRL 682 EK LY ++D + Y + +L P I+ +F++ +V V+D +V+ NRL Sbjct: 177 EKELYQAVNDLSEAFATRTIAENYEALVNL-----RPLIDAYFNETMVMVEDEKVKQNRL 231 Query: 683 SLLQYIKNIIL 693 L I + L Sbjct: 232 KQLMQIAKMAL 242 >gi|320540662|ref|ZP_08040303.1| putative glycine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] gi|320029275|gb|EFW11313.1| putative glycine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] Length = 263 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 18/265 (6%) Query: 434 QGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAIN 493 QG +G YA E A+ E +PR + +P ++++ ++++ADK+DTL + I Sbjct: 2 QGVMGMHYARHDGEVEDVAVALNEQYQPRFAGDRLPQSRVACSLAIADKMDTLAGIFGIG 61 Query: 494 EKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILFF 538 + P G KDP+ALRRA LG++RII+E + + L E+ ++ F Sbjct: 62 QHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQILTEEAMHLYSSKLTNVKVVDEVVEFM 121 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 R + + + D I+A+L +K ++ F + + + KR+ Sbjct: 122 LGRFRAWYQEEGHALDTIQAVLARRPTKPADFDARVKAVSHFRTLEEAAALAAANKRVSN 181 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 ILA K ++ + L AE +L + + ++ Y L ++ Sbjct: 182 ILA---KSTDTLNNHVQASVLQEAAEIQLASHLVVLRDKLEPYFAAGNYQDALVELATLR 238 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLS 683 EP++ FF+ V+V +D VR NRL+ Sbjct: 239 EPVDAFFENVMVMAEDDAVRVNRLT 263 >gi|309810240|ref|ZP_07704085.1| putative glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] gi|308169512|gb|EFO71560.1| putative glycine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] Length = 206 Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 20/195 (10%) Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF ELQG +G YA L E + AI+E P ++P KI +S+ADKLDT Sbjct: 1 MVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPITKIGSLLSIADKLDT 60 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--------- 536 +I F+ P+ S DPYALRR+ GI+RI++ +I + ++D +L Sbjct: 61 IIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKDIIALLKGKTVAKLP 120 Query: 537 -----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 F +R+K L + +D+I+ +L N+ I+ + L E +K Sbjct: 121 NDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANILSIADILQENHDDSK 180 Query: 586 GEKFLLSAKRIFQIL 600 +K + S RI IL Sbjct: 181 FKKVVESLTRIANIL 195 >gi|2500994|sp|P77891|SYGB_MORCA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|1657861|gb|AAB18210.1| glycyl-tRNA synthetase beta subunit [Moraxella catarrhalis] Length = 266 Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 22/269 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLR---STGLQ-TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ +TG ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR S I +IRP+ I +L+++ Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMR-----SGIDRHEFIRPVHWI--VLMSD 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 D +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 173 DV---VIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVE 258 LA V + ++LL+E+ LV+ Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVD 258 >gi|169836489|ref|ZP_02869677.1| Glycyl-tRNA synthetase beta chain [candidate division TM7 single-cell isolate TM7a] Length = 199 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 22/175 (12%) Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 +LQG +G YA Q E+ I EH PR + +PT +ADK+DT+I +A Sbjct: 7 KLQGFMGSVYAQKQGEDKDVALGIFEHYLPRYQGDKLPTTVEGAIAGIADKMDTIIGCFA 66 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------------DQNLIL-- 536 + KP+ SKDPYALRRAT GII+++L +K+ + IE ++N++ Sbjct: 67 VGLKPTSSKDPYALRRATQGIIQVVLNSKLSFDYKELIEKAYEIFSADKKVLEKNVVKDV 126 Query: 537 --FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 FF R+ L ++ + +LI + EN+ +V+L K L+E ++ E F Sbjct: 127 TEFFKQRIINVLSEK-YKKELINYEINLENN----VVELDKKLSELLKLSQTENF 176 >gi|313637824|gb|EFS03163.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri FSL S4-171] Length = 236 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 28/233 (12%) Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----LSQFIE---- 530 +ADKL+T + F+ +N P+GS DP+ LRR+ G +RII N DIP LS+ ++ Sbjct: 1 IADKLETFVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLELLSRIVDMERA 60 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + F +RL++ L + IRHD+I+A++ + + + +VD + LN+ Sbjct: 61 EGAVELPSDDVKREVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQLVDRAQILNK 120 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 S E F + + + ++L I +K E +E+ P E E L+ + Sbjct: 121 HVES---EWFRPTVEALTRVLNISKKY--EEGVEVDPALFENEYEHALFDKLEKLKYDYA 175 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 +R L +I + +FD LV D+ E+++NRL+LL + + I Sbjct: 176 SLTILERLRAFAGLRTTIDD----YFDNTLVMSDNLELKNNRLALLFELASFI 224 >gi|213026092|ref|ZP_03340539.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 232 Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 26/235 (11%) Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 +DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 1 MDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTN 60 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++I F R + + D D I+A+L +K ++ F + + Sbjct: 61 ASVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMKAVSHFRTLEEAS 120 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK----RLYAVISDFGTHIQESMD 643 + KR+ ILA K E +I +L EA + R V+ D +Q Sbjct: 121 ALAAANKRVSNILA----KATEPLNDIVHASVLKEAAEIELARHLVVLRD---KLQPYFA 173 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V ++ Sbjct: 174 DGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVADI 228 >gi|99036058|ref|ZP_01315094.1| hypothetical protein Wendoof_01000064 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 193 Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 13/189 (6%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP-H 62 L E SEEIP RMQ+ A + + + + V + +M + T R+ L++ ++ Sbjct: 5 LLFECLSEEIPPRMQNVVATQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNINALE 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + E GP + A K AI+GFLR Q + + + D Y I + Sbjct: 65 LKDSNNEVKGPNINAPKSAIEGFLRK--YQKNEEDLLVRKVNNEDFYFIKRESCSFNIRE 122 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 LK + ++ W KSMRW W+RP+K+ILCIL ++II + Sbjct: 123 FLKNQLEEMLKNFSWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPVSFAR 172 Query: 183 IPCGNITYG 191 I N TYG Sbjct: 173 ITASNTTYG 181 >gi|241563385|ref|XP_002401682.1| hypothetical protein IscW_ISCW020765 [Ixodes scapularis] gi|215501874|gb|EEC11368.1| hypothetical protein IscW_ISCW020765 [Ixodes scapularis] Length = 113 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 26/139 (18%) Query: 330 LEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGER 389 L DAL+F+K+D ++K L+ R+ +L+ V FHA++G E+ Sbjct: 1 LSDALYFYKQD--------------------IAKTLESRLGKLEA--VTFHAELGKLREK 38 Query: 390 VSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENI 449 V RI + K IA + D+ V + L K+DL +E+VREFPELQG +G YA + N Sbjct: 39 VERITKICKHIAP-NNKDLITVAK---LCKSDLVSEMVREFPELQGIMGYYYAKHEGLNE 94 Query: 450 SCCDAIEEHLKPRGPLENV 468 AI++H KPRG +NV Sbjct: 95 EVATAIKDHYKPRGLNDNV 113 >gi|58698041|ref|ZP_00372965.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58535398|gb|EAL59473.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] Length = 223 Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 14/221 (6%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP-HSPEKIEERLGPRV 75 MQ+ A + + + + V + +M + T R+ L++ ++ + E GP + Sbjct: 1 MQNSATVQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNINALELKDSNNEVKGPNI 60 Query: 76 GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKV 135 A K AI+GFLR Q + + + D Y I + LK + ++ Sbjct: 61 NAPKSAIEGFLRK--YQKNEEDLLVRKVNNEDFYFIKRESCSFNIREFLKNQLEEMLKNF 118 Query: 136 PWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRF- 194 W KSMRW W+RP+K+ILCIL ++II + I N TYGHRF Sbjct: 119 SWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPVSFAGITASNTTYGHRFL 168 Query: 195 HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + V++ Y LE+ V+L + R+ IL+ ++ Sbjct: 169 SSGTALTVKAPKDYFELLEKNSVILQMDKRKQFILDQINKF 209 >gi|169837066|ref|ZP_02870254.1| Glycyl-tRNA synthetase beta chain [candidate division TM7 single-cell isolate TM7a] Length = 147 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 32/170 (18%) Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGG 315 +VE+ G F+K YL LPE++I +T++T+Q+ F + ++G L+N FI++ N A + Sbjct: 1 MVEYPYAIKGEFNKDYLQLPEDIITITLETHQRYFPVKDKDGKLSNKFIVIRN--APEYS 58 Query: 316 AAIVQGNSRVVAARLEDALHFWKRDQNN--LPNLSSLKESALKFNLDLSKPLDQRMARLD 373 + +GN +VV RL DA F+ D N+ LKE Sbjct: 59 ETVKKGNEKVVEPRLADAKFFFDEDLKGKFADNVEKLKE--------------------- 97 Query: 374 MLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLC 423 V F +GT E+V R +KIA+ + +++ L + ++ DL Sbjct: 98 ---VTFQKDMGTIFEKVKR----SEKIAEYLISELNLSHKRNIIRTVDLA 140 >gi|218512702|ref|ZP_03509542.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli 8C-3] Length = 113 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 1/82 (1%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ-YWTPHRLFLYLKGL 59 MP+ LLE+ SEEIPARMQ KAA D ++ L E + + R YWTP RL L + GL Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDQIFLVTDALVEFLFVLRGPRAPYWTPRRLALDIHGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKKA 81 + S + EER GPR A +K Sbjct: 61 TARSADVCEERKGPRTDANEKG 82 >gi|330947682|gb|EGH48185.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. pisi str. 1704B] Length = 123 Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/49 (61%), Positives = 39/49 (79%) Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 V +ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L Sbjct: 2 VDIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNL 50 >gi|207110034|ref|ZP_03244196.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_CA4C1] Length = 134 Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 34/154 (22%) Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 +V+ ARL DA+ F++ D L KPLD A L+ VVF + Sbjct: 1 KVLKARLSDAVFFYEND--------------------LKKPLDN--APLE--SVVFVQGL 36 Query: 384 GTQGERVSRIRVLGKKIAQL--------IDADVALVDRAIVLSKADLCTEIVREFPELQG 435 GT +++ R ++ + + Q ++ + LV RA+ ++KADL +E+V EF ELQG Sbjct: 37 GTLKDKMERESIIAQYLTQKYISSLNMPLEKALELVKRAVKIAKADLLSEVVYEFSELQG 96 Query: 436 KIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +G YA+ QNEN +++E P EN P Sbjct: 97 IMGYYYALKQNENELVALSLKEQYLPAS--ENAP 128 >gi|207091643|ref|ZP_03239430.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_AG0C1] Length = 233 Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 22/239 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEAGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IHE-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVLF---NG 174 Query: 173 EKIIDLDLKE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 E D+++KE T HR I+V S Y LE+ V+LDP+ R IL Sbjct: 175 ENFNDIEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKIL 233 >gi|270700813|ref|ZP_06223055.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] gi|270315851|gb|EFA27950.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] Length = 163 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%) Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----------- 530 K DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 9 KFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAALFGDKLA 68 Query: 531 DQNLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 +QN++ F R + + D I D+I+A+L ++ ++ F + Sbjct: 69 NQNVVAEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSA 128 Query: 587 EKFLLSAKRIFQILA 601 E + KR+ ILA Sbjct: 129 EALAAANKRVSNILA 143 >gi|307069662|ref|YP_003878139.1| putative glycyl-tRNA synthetase subunit beta [Candidatus Zinderia insecticola CARI] gi|306482922|gb|ADM89793.1| putative glycyl-tRNA synthetase, beta subunit [Candidatus Zinderia insecticola CARI] Length = 679 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 12/117 (10%) Query: 428 REFPELQGKIGKEYAVLQNENISCCDAIE--EHLKPRGPLENVPTNKISITVSLADKLDT 485 +E+ +L+ I Y + N N S ++ E+ P +N+PT KI+I +S+ +K+ Sbjct: 390 KEYYKLEKYINMYYHI--NNNKSKIKSLYSYEYFLPFKKKKNLPTFKITILLSICNKISK 447 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ--------FIEDQNL 534 +INFW I KP +KDPY ++ T + +I++ K I ++ FI+++N Sbjct: 448 IINFWGIGLKPILNKDPYYIKLNTKMLFFLIIKKKFKISFTKLIIIYINLFIKNKNF 504 >gi|163784177|ref|ZP_02179112.1| Glycyl-tRNA synthetase, beta subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159880550|gb|EDP74119.1| Glycyl-tRNA synthetase, beta subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 223 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 25/205 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKA----AEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYL 56 M +LLEI EE+P + + A E L+ + + N+ ++ TP R+ + Sbjct: 1 MAQYLLEIGCEELPPKAVNTAREFLKEKLNELFFNFFQYHSP--DNIEEFATPRRIGFLV 58 Query: 57 KGLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 K L+ P + + +GP G KA F + I + +I ++ +KG Sbjct: 59 KNLNEKQPPEKKVIIGPPAKVAVDEEGKFTKAALAFASKNNI-PIEELKIIEN-EKGRYV 116 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A + K R I V++ +P I K+P+PK+M+W S F + RP++ I+ +L E Sbjct: 117 GAEIIKEGRDIRQVIEKELPEIISKIPFPKTMKWDN-----SGFRFSRPVRWIVSLLDNE 171 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRF 194 I+ L I T+ HRF Sbjct: 172 -----IVPFKLGNITADRYTHLHRF 191 >gi|322515582|ref|ZP_08068563.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] gi|322118385|gb|EFX90651.1| glycyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] Length = 113 Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 4/113 (3%) Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + KR+ ILA K + I E++P + AEK L + T +Q + Sbjct: 1 AEALAAANKRVSNILA---KADVAIG-EVNPTACVEPAEKALAEAVLGLRTEVQPLIAQG 56 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + D L S+ +P++ FFD V+VN +D E+R NRL++L ++ + L V ++ Sbjct: 57 EYTAVLDKLASLRQPVDNFFDNVMVNAEDPELRQNRLAILNTLQGLFLQVADI 109 >gi|329915034|ref|ZP_08276201.1| Glycyl-tRNA synthetase beta chain [Oxalobacteraceae bacterium IMCC9480] gi|327544995|gb|EGF30325.1| Glycyl-tRNA synthetase beta chain [Oxalobacteraceae bacterium IMCC9480] Length = 166 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 4/168 (2%) Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSA 593 ++ F +DRL+ L +R + IEA++ + D L I+D + ++ F + + E + Sbjct: 1 MLAFLYDRLRGLLRERGFTPNEIEAVVAQQPDVLENIIDRLDAVHAFAALPEAESLAAAN 60 Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KRI IL KK I + L AE+ LY ++ H+ + + Sbjct: 61 KRITNIL----KKTEGIPGPVHTGLLREVAEEALYGAMALLQPHVDAAFAKGDFSGTLLS 116 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + ++ FF V+V +D ++R NR++LL + ++ V ++ K+ Sbjct: 117 LAQLRHNVDAFFKDVMVMDEDAQLRANRIALLSQLHAMMNRVADISKL 164 >gi|511453|gb|AAA56913.1| unknown [Coxiella burnetii] Length = 145 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 15/138 (10%) Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---- 532 +++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 1 MAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKNNY 60 Query: 533 -------NLIL----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 N++ F +RL+ + ++++ + A+L D+ L IK + F Sbjct: 61 AVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQHFQ 120 Query: 582 SSAKGEKFLLSAKRIFQI 599 + + + + KR+ I Sbjct: 121 TLPEADALAAANKRVSNI 138 >gi|167950238|ref|ZP_02537312.1| Glycyl-tRNA synthetase, beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 135 Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 10/114 (8%) Query: 100 KKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPL 159 ++ KG+ L++ + ++L I A+ ++P PK MRW + + ++RP+ Sbjct: 5 RQKSDKGEWLCYQLKETGKSTRNLLPEIAETALARLPIPKRMRWGASEA-----QFVRPV 59 Query: 160 KSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE 213 +L +L E ++ L E TYGHRFH P I++ S Y LE Sbjct: 60 HWLLFLLGNE-----VVPCTLLEAEADRFTYGHRFHHPAAIEINSPAEYADKLE 108 >gi|34763773|ref|ZP_00144689.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886449|gb|EAA23708.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 174 Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 81/161 (50%), Gaps = 6/161 (3%) Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 + +++ F R+ D R D+I ++L + DN+ +++++ + E S K + L Sbjct: 9 ETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADNITNALEIVRVITEKLSKDKMQALL 68 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KR+ I+ K +++++ I + + EK LY ++++ K Y Sbjct: 69 QAVKRVSNIM----KGSKDVT--IKEKLFKNDIEKTLYTESKKVEEEAEKAIKEKEYADY 122 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + L ++ I+ +FD V+V +D+ VRDNR+ L YI N+ Sbjct: 123 FEKLFTLVPTIDKYFDTVIVMDEDKSVRDNRIGQLTYIMNL 163 >gi|207109522|ref|ZP_03243684.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_CA4C1] Length = 171 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 17/174 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEAGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRV---------GAGKKAID-GFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V G A+ GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 + + K +D++ IV ++ + + KSMRW S+IRP+ +I C+L Sbjct: 125 IHE-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNI-CVL 171 >gi|262189969|ref|ZP_06048278.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae CT 5369-93] gi|262034154|gb|EEY52585.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae CT 5369-93] Length = 141 Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%) Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KR+ ILA K + E+ EI L +AEK L + ++ + Y + Sbjct: 35 KRVGNILA---KYDGELGEEIDLALLQEDAEKALAEAVEIMAEALEPAFATGNYQEALSK 91 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L + P++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 92 LAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIADI 136 >gi|309807577|ref|ZP_07701529.1| glycine--tRNA ligase, beta subunit domain protein [Lactobacillus iners LactinV 01V1-a] gi|308169183|gb|EFO71249.1| glycine--tRNA ligase, beta subunit domain protein [Lactobacillus iners LactinV 01V1-a] Length = 151 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 8/129 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E + GP + G KA +GF+R + ++ D +K Y+ V ++ Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQKIKDVEYAYIHVKKE 122 Query: 116 PKRLIEDVL 124 K+ E +L Sbjct: 123 GKKATEILL 131 >gi|330976410|gb|EGH76466.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 108 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%) Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KR+ +L+ K I+ + P+Y E LY+ I IQ ++Y + Sbjct: 3 KRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAIQPMAAERQYSESLAR 59 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 60 LAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 104 >gi|330867891|gb|EGH02600.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 183 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 74/167 (44%), Gaps = 3/167 (1%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + ++ F DR++ D + + ++ + + L ++ + F + Sbjct: 16 EQVLDFIFDRMRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRKLPQAAALAA 75 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR+ +L+ K I+ + P+Y E LY+ I +Q ++Y + Sbjct: 76 VNKRVSNLLS---KAEGSIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMAAERQYSESL 132 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 133 ARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADI 179 >gi|32401316|gb|AAP80830.1| glycyl-tRNA synthetase beta chain [Griffithsia japonica] Length = 173 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 19/104 (18%) Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------I 529 V++AD++D+L+ +++ P + DP+ALRRA LG+++ ++ ++ L I Sbjct: 12 VAIADRIDSLVGLFSVGLVPKSTADPFALRRAALGVVQTVIAAGYNVDLRDMVRISAGSI 71 Query: 530 EDQN-----------LILFFHDRLKLYLHDR-DIRHDLIEAILR 561 DQ ++ F RL+ YL D IR D+++ +L+ Sbjct: 72 ADQTGKDVPLDVQDAVLEFIAKRLEGYLLDNVGIRDDVVKTVLK 115 >gi|309803286|ref|ZP_07697383.1| hypothetical protein HMPREF9214_0412 [Lactobacillus iners LactinV 11V1-d] gi|308164794|gb|EFO67044.1| hypothetical protein HMPREF9214_0412 [Lactobacillus iners LactinV 11V1-d] Length = 108 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 8/106 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 4 DYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAEK 63 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKK 101 + E + GP + G KA +GF+R + ++ D +K Sbjct: 64 QADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNM-SVDDIYFQK 108 >gi|4140516|gb|AAD04093.1| glycyl-tRNA synthetase [Chlamydia trachomatis] Length = 93 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%) Query: 249 LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSN 308 L++E + L E V FD + LP+EL+ + +Q+ F T+ +G + N F++V + Sbjct: 11 LVDETVFLTEHPFVISAQFDPAFCSLPKELLIAEMIQHQRYFPTQNMQGEITNRFLIVCD 70 Query: 309 IQASDGGAAIVQGNSRVVAARLEDA 333 +D +IV+GN + +A RL D Sbjct: 71 NSPTD---SIVEGNEKALAPRLTDG 92 >gi|313608762|gb|EFR84579.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL F2-208] Length = 188 Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 9/149 (6%) Query: 537 FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 F +RL++ L IRHD+I+A++ + + + ++D + LNE A+ E F + + + Sbjct: 30 FLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQLIDRAQILNE---HAEAEWFRPTIEAL 86 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 +++ I K E +E+ P E E+ L+ + +R DL + Sbjct: 87 SRVVKI--AKKYEDGVEVDPALFENEYEQALFDKLEKLKFDYAGLTIIERLKAFADLRTT 144 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 I+ +FD LV D+ E+++NRL+LL Sbjct: 145 ----IDAYFDNTLVMSDNDELKNNRLALL 169 >gi|207111689|ref|ZP_03245851.1| hypothetical protein HpylH_21690 [Helicobacter pylori HPKX_438_CA4C1] Length = 41 Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats. Identities = 19/40 (47%), Positives = 32/40 (80%) Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ Sbjct: 2 VALSLKLDSLFSLFSTGKIPSGSKDPFALRRLSFGLLKIV 41 >gi|167950242|ref|ZP_02537316.1| glycyl-tRNA synthetase subunit beta [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 143 Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%) Query: 569 TIVDLIKHL---NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEK 625 +I D + L F + E + KRI +L +K + E+ ++ Q L E+ Sbjct: 8 SIADFYRRLEAVKAFRDLDESEALAAANKRIQNLL---KKVDGEVQEHVNTQLLKQPEER 64 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L + + ++ Y L + +P++ FFDQVLV D ++R+NRL+LL Sbjct: 65 ELNDQLQAMKLRVSPMIESADYQGTLMGLAELRQPVDRFFDQVLVMADQADIRNNRLALL 124 Query: 686 QYIKNIILIVINV 698 + + N+ L V +V Sbjct: 125 KGLSNLFLKVADV 137 >gi|329925854|ref|ZP_08280583.1| glycine--tRNA ligase, beta subunit family protein [Paenibacillus sp. HGF5] gi|328939600|gb|EGG35948.1| glycine--tRNA ligase, beta subunit family protein [Paenibacillus sp. HGF5] Length = 194 Score = 45.8 bits (107), Expect = 0.027, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 14/161 (8%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 ++L FF R+K L + D R+D+++A++ D+++++V L S + K + Sbjct: 29 KDLKEFFGLRVKKLLSE-DQRYDVVDAVITAGFDHVVSVVSRGHALMNAVESVQDFKTTV 87 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY----AVISDFGTHIQESMDHKRY 647 + LA + K ++ + E +LY A+ +D+ +Q + + Sbjct: 88 ESFNRVSNLAAKAGK-----AAVNAELFTESEENKLYEAWNAIRADYHAALQAAEGERSL 142 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 LL + EPI FFD V+V +D VR NRL+LL I Sbjct: 143 ----SLLSGLREPITGFFDSVMVMAEDEAVRANRLALLSGI 179 >gi|322367961|ref|ZP_08042530.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320551977|gb|EFW93622.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 583 Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 605 KKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 + + EI +I P L E+E+ L VI+ F I+E+ D H + E F Sbjct: 480 EGDGEIPTDIDPSLLDSESERDLIEVIARFPNVIEEAADDLEPHAVATYTREFAETFNAF 539 Query: 665 FDQVLV-NVDDREVRDNRLSLLQYIKNIILIVINV 698 + + V +D EVRD RL+L+ K+ I + V Sbjct: 540 YRECPVLTAEDEEVRDARLALVAAAKHTIANALGV 574 >gi|213024988|ref|ZP_03339435.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 134 Score = 44.7 bits (104), Expect = 0.050, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E+ GP + G KA +G+ R G+ ++ D + +Y A ++ Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAYVK 123 >gi|297519887|ref|ZP_06938273.1| glycyl-tRNA synthetase subunit beta [Escherichia coli OP50] Length = 116 Score = 44.7 bits (104), Expect = 0.060, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 6 FLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGL 91 P++ E+ GP + G KA +G+ R G+ Sbjct: 66 PDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGI 100 >gi|159900875|ref|YP_001547122.1| metal dependent phosphohydrolase [Herpetosiphon aurantiacus ATCC 23779] gi|159893914|gb|ABX06994.1| metal dependent phosphohydrolase [Herpetosiphon aurantiacus ATCC 23779] Length = 169 Score = 43.5 bits (101), Expect = 0.12, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 7/104 (6%) Query: 388 ERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE 447 E + R+ +IA+L+ ADV + RA +L D + E G + +A Q E Sbjct: 29 EHLMRVTRYSYRIARLLKADVRVCTRAALLHDIDSRYGTL----ENHGAVAARWAEEQGE 84 Query: 448 NISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 + + C AI H+ P GP P + +SLADK +L + A Sbjct: 85 DFAVCQAIIGHMYPIGP---APMTREGWILSLADKAASLADLTA 125 >gi|237736437|ref|ZP_04566918.1| glycyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] gi|229421479|gb|EEO36526.1| glycyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] Length = 161 Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/149 (22%), Positives = 73/149 (48%), Gaps = 6/149 (4%) Query: 553 HDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 D+I A++ + DNL+ ++ +K L F + K L KR+ I + Sbjct: 16 RDVIVAVVDKDCDNLVDALERVKTLESFAKEEEFGKLLPVLKRVGNI------SKDHTDM 69 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 I+P+ + EK LY + + +++ + Y + + + S + I +FD+++V Sbjct: 70 IINPELFKEDIEKELYQFSVELSNKVNLAIEQRDYAKYLEEITSGKDIINNYFDKIIVMD 129 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKI 701 D +++NRLS ++++ +I + ++ +I Sbjct: 130 KDEAIKNNRLSQMRFLTDIFTKMADLNQI 158 >gi|270726109|ref|ZP_06223427.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] gi|270315246|gb|EFA27578.1| glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae HK1212] Length = 141 Score = 43.1 bits (100), Expect = 0.15, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 9/131 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL-- 113 P K E+ GP V A GK KA +G+ R G+ +I D + V+ A + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATDKGEWLVHRAKIEG 124 Query: 114 RKPKRLIEDVL 124 + K L+ D++ Sbjct: 125 QPTKNLLNDIV 135 >gi|167950239|ref|ZP_02537313.1| glycyl-tRNA synthetase subunit beta [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 84 Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 33/55 (60%) Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 D+ LL+E+ L EW GSF++++L +P E + LT+K NQK F E LA Sbjct: 14 DEALLDEVTALNEWPVPIAGSFEERFLEVPHEALVLTMKKNQKYFPLFDSEQRLA 68 >gi|145628142|ref|ZP_01783943.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] gi|144979917|gb|EDJ89576.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] Length = 163 Score = 43.1 bits (100), Expect = 0.17, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 9/131 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL-- 113 P K E+ GP V A GK KA +G+ R G+ +I D + ++ A + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATDKGEWLIHRAKIEG 124 Query: 114 RKPKRLIEDVL 124 + K L+ D++ Sbjct: 125 QPTKNLLNDIV 135 >gi|11120072|gb|AAG30824.1|AF286536_1 GlyS-like protein [Pseudomonas fluorescens] Length = 199 Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 4/105 (3%) Query: 594 KRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 KR+ +L+ E + + +Y AE L + I +Q M+ + Y + Sbjct: 95 KRVSNLLSKAEPSVKAVE----ARYFDNAAEFSLNSAIQQAYASVQPLMEKRDYAEALAR 150 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L ++ EP++ FF+ V+VN D+ +VR NR +LL ++++ L + ++ Sbjct: 151 LAALREPVDAFFEAVMVNADNEDVRKNRYALLARLRSLFLNIADI 195 >gi|145640588|ref|ZP_01796171.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae R3021] gi|145274514|gb|EDK14377.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae 22.4-21] Length = 150 Score = 42.0 bits (97), Expect = 0.33, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 9/141 (6%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELIQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-----GK--KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P K E+ GP V A GK KA +G+ G+ +I D + V+ A L+ Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWAHGCGITVEQAERIATDKGEWLVHCAKLKA 124 Query: 115 -KPKRLIEDVLKTIVPVAIQK 134 +PK + K + +A K Sbjct: 125 NRPKLIKRHCGKCVSEIANSK 145 >gi|313888948|ref|ZP_07822608.1| conserved domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845121|gb|EFR32522.1| conserved domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 105 Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 41/73 (56%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EE+P+R + A E L LL E + +++++ Y TP RL L ++GL Sbjct: 1 MNNYLLEIGVEELPSRFVNMAIEQLREKSQKLLVENELGFKDVKVYATPRRLSLIIEGLD 60 Query: 61 PHSPEKIEERLGP 73 + +E GP Sbjct: 61 EKQKDITKEVKGP 73 >gi|325849548|ref|ZP_08170786.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480029|gb|EGC83106.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 124 Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 10/127 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE P+ + + L L++E + + ++ TP R + L GL Sbjct: 1 MSKYLLEIGVEEFPSAYINSTKKQLEEKFKKLIEENKLSLEEIKVESTPRRFAILLDGLE 60 Query: 61 PHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E++ GP G KA+ GFLR ISD IK KG+ Y+ V Sbjct: 61 ENKSEELISVKGPSKKIAYDNEGNPSKALLGFLRGQK-ADISDVIIKDF--KGEEYVYVE 117 Query: 114 RKPKRLI 120 +K K L+ Sbjct: 118 KKKKALL 124 >gi|296134410|ref|YP_003641657.1| arginyl-tRNA synthetase [Thermincola sp. JR] gi|296032988|gb|ADG83756.1| arginyl-tRNA synthetase [Thermincola potens JR] Length = 561 Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 43/79 (54%) Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 I+P L AE L ++DF T + E+ + H++ LH + F++ V ++ Sbjct: 468 INPAVLKQAAELELLRKLADFPTEVAEAAVNLEPHRMARYLHELAGIFHSFYNSNRVMIE 527 Query: 674 DREVRDNRLSLLQYIKNII 692 D+++RD RL L++ ++ ++ Sbjct: 528 DKDIRDARLVLVKSVQQVL 546 >gi|42768709|gb|AAS45570.1| putative glycyl-tRNA synthetase beta chain [Aeromonas hydrophila] Length = 162 Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 3/138 (2%) Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 R + D I D++ A+L L +K ++ F + + KR+ IL Sbjct: 4 RFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVSHFRTLDAALALAAANKRVSNIL 63 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 A K E+ + P+ L+ AEK L +++ + Y L ++ EP Sbjct: 64 A---KVEGELPTAVKPELLVDAAEKALATQVAELQAELAPLFAAGDYQAALTRLAALREP 120 Query: 661 IEIFFDQVLVNVDDREVR 678 ++ FF++V+V DD ++ Sbjct: 121 VDTFFNEVMVMADDEALK 138 >gi|148656156|ref|YP_001276361.1| metal dependent phosphohydrolase [Roseiflexus sp. RS-1] gi|148568266|gb|ABQ90411.1| metal dependent phosphohydrolase [Roseiflexus sp. RS-1] Length = 172 Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 15/103 (14%) Query: 388 ERVSRIRVLGKKIAQLIDADVALVDRAIVL----SKADLCTEIVREFPELQGKIGKEYAV 443 + ++R + +++L+ ADV RA +L S+A T G++ +A Sbjct: 34 DHLTRSVRMSYHLSRLLRADVRTCVRAALLHDINSRAGTLTT--------HGRVAARWAA 85 Query: 444 LQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 + E+ + C AIE H+ P GP PT++ + + LADK +L Sbjct: 86 EKGEDAAVCAAIESHMYPLGP---APTSREAWVLVLADKAASL 125 >gi|195451005|ref|XP_002072727.1| GK13758 [Drosophila willistoni] gi|194168812|gb|EDW83713.1| GK13758 [Drosophila willistoni] Length = 342 Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Query: 10 SEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK 66 +E++ A+ QH +A DL+++LI L++ G + + YW P RL ++G SP + E+ Sbjct: 73 AEKLIAKDQHSSAADLALLLIDTLEKRGSLPGDNNFYWVP-RLGSLIRGFSPTTVER 128 >gi|149193981|ref|ZP_01871079.1| Glycine--tRNA ligase [Caminibacter mediatlanticus TB-2] gi|149135934|gb|EDM24412.1| Glycine--tRNA ligase [Caminibacter mediatlanticus TB-2] Length = 109 Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 7/78 (8%) Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK LY I +++ + K + D L S+ I+ FFD VLVNV+D ++R+NR S Sbjct: 37 EKELYEAI-------KKAKEFKNIEKKLDYLISLKPLIDKFFDNVLVNVEDEKIRNNRKS 89 Query: 684 LLQYIKNIILIVINVQKI 701 L+ I L + ++++I Sbjct: 90 LIASIYKEFLDIADIKEI 107 >gi|330813969|ref|YP_004358208.1| glycyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] gi|327487064|gb|AEA81469.1| glycyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] Length = 194 Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 24/166 (14%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN--------LLTIVDLIKHLNEFFSSA 584 +L+ FF+DR K L ++DI ++++++L + ++TI IK Sbjct: 21 DLVEFFNDRFKSLLKEKDISFNVVDSVLNNNRSDDFYNLFLKIITIAKCIKQ-------P 73 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREI---SLEISPQYLLL--EAEKRLYAVISDFGTHIQ 639 +G + + KR IL ++N +I ++ +P +L E E+ L+A I++ + Sbjct: 74 EGINSIAAYKRAKNIL----EQNEDIIKGNIFGTPDIVLFNSEIEETLFAKINEVKEYFT 129 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + +L + + FF++V VN ++ EV+ NRL LL Sbjct: 130 TPSRLRDSKKTIQMLSEVKVITDQFFEEVKVNDENEEVKKNRLELL 175 >gi|156742946|ref|YP_001433075.1| metal dependent phosphohydrolase [Roseiflexus castenholzii DSM 13941] gi|156234274|gb|ABU59057.1| metal dependent phosphohydrolase [Roseiflexus castenholzii DSM 13941] Length = 172 Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 15/103 (14%) Query: 388 ERVSRIRVLGKKIAQLIDADVALVDRAIVL----SKADLCTEIVREFPELQGKIGKEYAV 443 + ++R + +++L+ AD+ RA +L S+A T G++ +A Sbjct: 34 DHLTRSVRMSYHLSRLLRADIRTCVRAALLHDINSRAGTLTT--------HGRVAARWAA 85 Query: 444 LQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 Q E+ + C AIE H+ P GP P ++ + + LADK +L Sbjct: 86 AQGEDPAVCAAIESHMYPLGP---APASREAWVLVLADKAASL 125 >gi|145638255|ref|ZP_01793865.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] gi|145272584|gb|EDK12491.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] Length = 52 Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 31/47 (65%) Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 2 DKLANLRMPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADI 48 >gi|308512011|ref|XP_003118188.1| CRE-MLTN-13 protein [Caenorhabditis remanei] gi|308238834|gb|EFO82786.1| CRE-MLTN-13 protein [Caenorhabditis remanei] Length = 799 Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 24/155 (15%) Query: 460 KPRGPLENVPTNKISITV-SLADKLDTLINFWAINEKPSGSKDPYA-LRRATLGIIRIIL 517 +P P +NV + +I + LA K F I E P+G +D A +RR +R+ Sbjct: 251 EPVQPEQNVTATRPAIDLPKLASKY-----FQRIVEGPTGQRDHLANIRRIRNHYLRVEK 305 Query: 518 ENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 N + + D+N +F D+LKL ++ + + END IVD++ Sbjct: 306 CNG----YFKLMNDENKKVF--DQLKLPINSEAPK-------IENENDAFQKIVDIV--- 349 Query: 578 NEFFSSAKGEK-FLLSAKRIFQILAIEEKKNREIS 611 N+F +S G+K F + RIF I+ + KNR +S Sbjct: 350 NQFSASEVGQKKFSFLSPRIFSIMPEGKPKNRFLS 384 Searching..................................................done Results from round 2 >gi|254781094|ref|YP_003065507.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040771|gb|ACT57567.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 702 Score = 901 bits (2328), Expect = 0.0, Method: Composition-based stats. Identities = 702/702 (100%), Positives = 702/702 (100%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS Sbjct: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI Sbjct: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL Sbjct: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG Sbjct: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA Sbjct: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD Sbjct: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA Sbjct: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA Sbjct: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD Sbjct: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL Sbjct: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP Sbjct: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV Sbjct: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 >gi|241203330|ref|YP_002974426.1| glycyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857220|gb|ACS54887.1| glycyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 704 Score = 899 bits (2323), Expect = 0.0, Method: Composition-based stats. Identities = 378/702 (53%), Positives = 493/702 (70%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVSDVMPGIIRDFPWPKSMRWGKASSKPGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y +LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAITVRRFDDYAANLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-VL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + G L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRPQGGETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQASDGG IV GN +VV ARL DALHFWKRDQ NLP+L +L+ SA KF L Sbjct: 301 SNKFILVSNIQASDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLEASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL+DRA VL+K Sbjct: 361 DLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRTLAKELADITGADAALIDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YAVLQ E+ S AIE+H KP+GP + VP ++++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAVLQGEDASVAAAIEDHYKPQGPSDRVPEDRVAITIAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTLI FWAI+EKP+GSKDP+ALRRA LG++RI+LE +I +PL +D +L+ FFH Sbjct: 481 ADKLDTLIGFWAIDEKPTGSKDPFALRRAALGVVRILLERRIRLPLLATTKDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHDLI+A+L + D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARHDLIDAVLTSDADDLLMVARRVEALTAFITSEDGKNLLSGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L L+AEK L+A IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALLTLDAEKELFAAISGASKDASDAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|116250725|ref|YP_766563.1| glycyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. viciae 3841] gi|229558570|sp|Q1MKQ6|SYGB_RHIL3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|115255373|emb|CAK06448.1| putative glycyl-tRNA synthetase beta chain [Rhizobium leguminosarum bv. viciae 3841] Length = 704 Score = 896 bits (2315), Expect = 0.0, Method: Composition-based stats. Identities = 376/702 (53%), Positives = 492/702 (70%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVTDVMPGIIRDFPWPKSMRWGKASSKPGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP PI V+ D Y +LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEPITVRRFDDYAANLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-VL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + G L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRPQGGETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQASDGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNKFILVSNIQASDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLTASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 D++KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL+DRA VL+K Sbjct: 361 DINKPLDQRMAKLDALDVTFHAKLGTQGARVARIRTLAKQLADITGADAALIDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YA LQ E+ S A+E+H KP+GP + VP ++++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAALQGEDASVAAALEDHYKPQGPSDRVPEDRVAITIAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTLI FWAI+EKP+GSKDP+ALRRA LG++RI+LE K+ +PL D +L+ FFH Sbjct: 481 ADKLDTLIGFWAIDEKPTGSKDPFALRRAALGVVRILLERKVRLPLLTTTRDIDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHDLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARHDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +S L L+AEK L+A IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSQALLKLDAEKELFAAISGASKDASDAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|86356536|ref|YP_468428.1| glycyl-tRNA synthetase subunit beta [Rhizobium etli CFN 42] gi|123512853|sp|Q2KBT5|SYGB_RHIEC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|86280638|gb|ABC89701.1| glycyl-tRNA synthetase, beta subunit protein [Rhizobium etli CFN 42] Length = 704 Score = 895 bits (2314), Expect = 0.0, Method: Composition-based stats. Identities = 379/702 (53%), Positives = 484/702 (68%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL +IS+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSISEAQVVNDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSAPGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y LE A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAIMVRRFDDYAASLERAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + E L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEDTL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+ASDGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNRFILVSNIEASDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLAASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L +K+A + AD AL DRA VL+K Sbjct: 361 DLQKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAQKLAAVTGADAALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YA LQ EN S AIE+H KP+GP + VP +K++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAALQGENASVAAAIEDHYKPQGPSDRVPEDKVAITLAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE I +PL D +L+ FFH Sbjct: 481 ADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERGIRLPLLATTRDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHDLI+A+L PE D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARHDLIDAVLTPEADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L+AEK L+A IS ++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALFKLDAEKELFAAISSASKDAANAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|327190722|gb|EGE57803.1| glycyl-tRNA synthetase protein, beta subunit [Rhizobium etli CNPAF512] Length = 704 Score = 893 bits (2309), Expect = 0.0, Method: Composition-based stats. Identities = 376/702 (53%), Positives = 490/702 (69%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSKSGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGIIASNITYGHRFHAPEAITVRRFDDYAASLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + EG L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRRQGEGTL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNRFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLGASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL DRA VL+K Sbjct: 361 DLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAKELAAITGADPALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YAVLQ EN S A+E+H KP+GP + VP +K++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAVLQGENASVAAAVEDHYKPQGPSDRVPEDKVAITLAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL D +L+ FFH Sbjct: 481 ADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATTRDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ R+DLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARYDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L L+AEK L++ IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALLKLDAEKELFSAISSASKDAADAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF++VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|190890601|ref|YP_001977143.1| glycyl-tRNA synthetase, beta subunit [Rhizobium etli CIAT 652] gi|238692499|sp|B3PRI2|SYGB_RHIE6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|190695880|gb|ACE89965.1| glycyl-tRNA synthetase protein, beta subunit [Rhizobium etli CIAT 652] Length = 704 Score = 892 bits (2306), Expect = 0.0, Method: Composition-based stats. Identities = 376/702 (53%), Positives = 489/702 (69%), Gaps = 1/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSKSGALRWVRPLQSIVCTFGPEHEETTVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ D Y LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAITVRRFDDYAASLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + E L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEDTL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ NLP+L +L SA KF L Sbjct: 301 SNRFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGNLPDLETLAASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L K++A + AD AL DRA VL+K Sbjct: 361 DLQKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAKELAAITGADPALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YAVLQ EN S A+E+H KP+GP + VP +K++IT++L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAVLQGENASVAAAVEDHYKPQGPSDRVPEDKVAITLAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG++RI+LE ++ +PL D +L+ FFH Sbjct: 481 ADKLDTLTGFWAIDEKPTGSKDPFALRRAALGVVRILLERRVRLPLLATTRDGDLLSFFH 540 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ R+DLI+A+L P+ D+LL + ++ L F +S G+ L KR Q+ Sbjct: 541 DRLKVYLRDQGARYDLIDAVLTPDADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQL 600 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK I+ +SP L L+AEK L+A IS +++ + + + L + Sbjct: 601 LAAEEKKGTVIADGVSPALLKLDAEKELFAAISSASKDAADAVAGEDFRSAMEALSKLRG 660 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF++VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 PVDRFFEEVLVNDEDAAIRANRLALLRLIREATGTVADFSKI 702 >gi|325292025|ref|YP_004277889.1| glycyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] gi|325059878|gb|ADY63569.1| glycyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] Length = 717 Score = 890 bits (2300), Expect = 0.0, Method: Composition-based stats. Identities = 369/716 (51%), Positives = 494/716 (68%), Gaps = 14/716 (1%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVERGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GPR A +KAI+GFLR GL +S+ Q+ DPKKGD Y+A++ KP R Sbjct: 61 ARSADVREEKKGPRTDANEKAIEGFLRGAGLNDVSEAQVVSDPKKGDFYIAIINKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E+++ ++P I+ PWPKSMR P + W+RPL+SI+C+ Sbjct: 121 EEIIAEVMPGIIRSFPWPKSMRSGPASMPKGSSYAGIEGKGSESLRWVRPLQSIVCLFGP 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + ++I + I GN+TYGHRFHAP PI V+ + Y+ LE+A V+LD + R++ I Sbjct: 181 EHDETQVIPFVIDGIVAGNVTYGHRFHAPGPITVRRFEDYVSSLEKAKVILDADRRKDII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA LA A GLELVED+ LLEE+ GLVEW QV MG+F++ YL +P E+IRLTIKTNQK Sbjct: 241 LHDAKDLAFANGLELVEDEGLLEEVSGLVEWPQVLMGTFEEDYLQIPAEIIRLTIKTNQK 300 Query: 289 CFVTRTR--EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 CFVTR + E L+N FIL+SNI+ASDGG I+ GN +VV ARL DA HFW RDQ +LP+ Sbjct: 301 CFVTRNQGAEEGLSNRFILISNIEASDGGKEIIHGNGKVVRARLSDARHFWNRDQGDLPD 360 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L +LK+SA KF LDL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L K +A ++ A Sbjct: 361 LETLKDSAAKFGLDLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRELAKALAAVVGA 420 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ALVDRA+VL+KADL TE V EFPELQG +G++YA LQ EN S AIE+H KP+GP + Sbjct: 421 DAALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYATLQGENESVAAAIEDHYKPQGPSD 480 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +K++ITV+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG++RI+LE + +PL Sbjct: 481 RLPADKVAITVALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRILLEKNVRLPLL 540 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 +D +L+ FFHDRLK+YL D R+DLI+A+L PE+D+LL I ++ L F + G Sbjct: 541 SVAKDTDLLSFFHDRLKVYLRDLGARYDLIDAVLTPESDDLLMIARRVEALTAFITGEDG 600 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 L AKR Q+LA EEKK ++ +S + L L+AEK LYA I ++++ + Sbjct: 601 RNLLAGAKRATQLLAAEEKKGTVVANSVSEELLKLDAEKALYAAIKTASADAAKAVETED 660 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L ++ P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 FRSAMQALSTLRAPVDKFFEDVLVNDEDAAIRANRLALLKAIREATGTVADFSKIT 716 >gi|15887985|ref|NP_353666.1| glycyl-tRNA synthetase subunit beta [Agrobacterium tumefaciens str. C58] gi|229470693|sp|A9CK39|SYGB_AGRT5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|15155593|gb|AAK86451.1| glycyl-tRNA synthetase, beta chain [Agrobacterium tumefaciens str. C58] Length = 717 Score = 888 bits (2295), Expect = 0.0, Method: Composition-based stats. Identities = 372/716 (51%), Positives = 496/716 (69%), Gaps = 14/716 (1%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVERGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GPR A +KAI+GFLR GL IS+ Q+ DPKKGD Y+A++ KP R Sbjct: 61 ARSADVREEKKGPRTDANEKAIEGFLRGAGLNDISEAQVVSDPKKGDFYIAIINKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E+++ ++P I+ PWPKSMR P + W+RPL+SI+C+ Sbjct: 121 EEIIAEVMPGIIRSFPWPKSMRSGPASMPKGSSYAGIEGKGSESLRWVRPLQSIVCLFGP 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + ++I + I GNITYGHRFHAP PI V+ + Y+ +LE+A V+LD + R++ I Sbjct: 181 EHDETQVIPFVIDGIVAGNITYGHRFHAPGPITVRRFEDYVSNLEKAKVILDADRRKDII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA LA A GLELVED+ LLEE+ GLVEW QV MG+F++ YL +P E+IRLTIKTNQK Sbjct: 241 LHDAKDLAFANGLELVEDEGLLEEVSGLVEWPQVLMGTFEEDYLQIPAEIIRLTIKTNQK 300 Query: 289 CFVTRTR--EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 CFVTR + E L+N FIL+SNI+ASDGG I+ GN +VV ARL DA HFW RDQ +LP+ Sbjct: 301 CFVTRNQGAEEGLSNRFILISNIEASDGGKEIIHGNGKVVRARLSDARHFWNRDQGDLPD 360 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L +LK+SA KF+LDL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L K +A ++ A Sbjct: 361 LETLKDSAAKFDLDLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRELAKALAPVVGA 420 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ALVDRA+VL+KADL TE V EFPELQG +G++YAVLQ EN S AIE+H KP+GP + Sbjct: 421 DGALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYAVLQGENESVAAAIEDHYKPQGPSD 480 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +K++ITV+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG++RI+LE + +PL Sbjct: 481 RLPADKVAITVALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRILLEKNVRLPLL 540 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 D +L+ FFHDRLK+YL D R+DLI+A+L PE+D+LL I ++ L F + G Sbjct: 541 SVARDSDLLSFFHDRLKVYLRDLGARYDLIDAVLTPESDDLLMIARRVEALTAFITGEDG 600 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 L AKR Q+LA EEKK ++ +S + L L+AEK LYA I ++++ + Sbjct: 601 RNLLAGAKRATQLLAAEEKKGTVVADGVSEELLKLDAEKALYAAIKTASADAAKAVEGED 660 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L ++ P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 661 FRSAMQALSTLRAPVDKFFEDVLVNDEDAAIRANRLALLKAIREATGTVADFSKIT 716 >gi|222085067|ref|YP_002543597.1| glycyl-tRNA synthetase [Agrobacterium radiobacter K84] gi|221722515|gb|ACM25671.1| glycyl-tRNA synthetase [Agrobacterium radiobacter K84] Length = 742 Score = 886 bits (2290), Expect = 0.0, Method: Composition-based stats. Identities = 366/741 (49%), Positives = 494/741 (66%), Gaps = 39/741 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ +R+YWTP RL L ++G++ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGVREYWTPRRLTLDIRGVT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q++ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVQSDPKKGDFYVAVISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW + + W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVADVMPWIIRDFPWPKSMRWGKASAKPGSLRWVRPLQSIVCTFGTEHEETVVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N+TYGHRFHAP PI V+ D Y+ L++A V+LD E R++ IL+DA +A A G Sbjct: 181 DGIVASNVTYGHRFHAPGPITVKRFDDYVSSLDKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE---- 296 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR ++ Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRRQDSHLP 300 Query: 297 -----------------------------------GVLANCFILVSNIQASDGGAAIVQG 321 G L+N FILVSNIQA+DGG I+ G Sbjct: 301 LNGGGRSEAAGGGDPLLQQNHPTPALRANPPPQGEGALSNRFILVSNIQATDGGKEIIHG 360 Query: 322 NSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHA 381 N +VV ARL DALHFWKRDQ +LP+L +L+ SA KF LDL KPLDQRMA+LD L+V FHA Sbjct: 361 NGKVVRARLSDALHFWKRDQGDLPDLETLEASAAKFGLDLKKPLDQRMAKLDALNVTFHA 420 Query: 382 KIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEY 441 K+G+QGERV+RIR L ++A++ AD VDRA VL+KADL TE V EFPELQG +G++Y Sbjct: 421 KLGSQGERVARIRTLAAELAKITGADPLKVDRAAVLAKADLRTEAVGEFPELQGLMGRKY 480 Query: 442 AVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKD 501 A LQ E+ S AIE+H KP+GP + VP +K++ITV+LADKLDTL+ FWAI+EKP+GSKD Sbjct: 481 AALQGEDASVAAAIEDHYKPQGPSDRVPDDKVAITVALADKLDTLMGFWAIDEKPTGSKD 540 Query: 502 PYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 PYALRRA LG++RI+LE K+ +PL +D +L+ FFHDRLK+YL D+ R+DLI+++L Sbjct: 541 PYALRRAALGVVRILLERKVRLPLLAVTKDADLLAFFHDRLKVYLRDQGARYDLIDSVLT 600 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 PE D+LL + ++ L F +S G+ L KR Q+LA EEKK ++ +S L L Sbjct: 601 PEADDLLMVARRVEALTAFITSEDGKNLLAGTKRATQLLAAEEKKGTAVADGVSESLLTL 660 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 +AEK L+A ++ ++ + + L ++ P++ FF VLVN +D +R NR Sbjct: 661 DAEKDLFAAVTKASAEAANAIVGEDFRSAMAALSTLRAPVDRFFGDVLVNDEDAAIRANR 720 Query: 682 LSLLQYIKNIILIVINVQKIV 702 L+LL+ I+ V + KI Sbjct: 721 LALLRLIREATGTVADFSKIA 741 >gi|209548144|ref|YP_002280061.1| glycyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533900|gb|ACI53835.1| glycyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 727 Score = 885 bits (2288), Expect = 0.0, Method: Composition-based stats. Identities = 374/725 (51%), Positives = 484/725 (66%), Gaps = 24/725 (3%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L + GL+ Sbjct: 1 MPNLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLSYEGAREYWTPRRLALDIHGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR GL ++S+ Q+ DPKKGD Y+AV+ KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRGAGLSSVSEAQVVSDPKKGDFYVAVISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW S A W+RPL+SI+C E + +I ++ Sbjct: 121 EEIVAEVMPGIIRDFPWPKSMRWGKASSRPGAMRWVRPLQSIVCTFGPEHEETVVIPFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N TYGHRFHAP I V+ D Y LE+A V+LD E R++ IL+DA +A A G Sbjct: 181 DGITASNTTYGHRFHAPEAITVRRFDDYAASLEKAKVILDAERRKDIILHDARDIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW QV MGSF++ YL +P E+IRLTIKTNQKCFVTR + E L Sbjct: 241 LELVEDEGLLEEVSGLVEWPQVLMGSFEEDYLSIPSEIIRLTIKTNQKCFVTRKQGEETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNIQA DGG IV GN +VV ARL DALHFWKRDQ +LP+L +L SA KF L Sbjct: 301 SNKFILVSNIQAHDGGKEIVHGNGKVVRARLSDALHFWKRDQGDLPDLETLTASAAKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD LDV FHAK+GTQG RV+RIR L +++A++ AD AL DRA VL+K Sbjct: 361 DLKKPLDQRMAKLDALDVTFHAKLGTQGARVARIRALAEELAKITGADAALTDRAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G++YA LQ EN S AIE+H KP+GP + VP +K++ITV+L Sbjct: 421 ADLRTEAVGEFPELQGLMGRKYAGLQGENGSVAAAIEDHYKPQGPSDRVPADKVAITVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--- 536 ADKLDTLI FWAI EKP+GSKDP+ALRRA LG++RI+LE + +PL + +L+ Sbjct: 481 ADKLDTLIGFWAIGEKPTGSKDPFALRRAALGVVRILLERNVRLPLLTIMSQTSLLAKTG 540 Query: 537 --------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 FFHDRLK+YL D+ RHDLI+A+L + D+LL + ++ Sbjct: 541 GDTVFAFAGDPAETFFDLLSFFHDRLKVYLRDQGARHDLIDAVLTSDADDLLMVARRVEA 600 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L F +S G+ L KR Q+LA EEKK I+ +SP L L+AEK L+A IS Sbjct: 601 LTAFITSEDGKNLLAGTKRATQLLAAEEKKGTVIADAVSPALLKLDAEKELFAAISGASK 660 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +++ + + L + P++ FF+ VLVN +D +R NRL+LL+ I+ V Sbjct: 661 EAADAVASEDFRSAMAALSKLRGPVDRFFEDVLVNDEDAAIRANRLALLRLIREATGTVA 720 Query: 697 NVQKI 701 + KI Sbjct: 721 DFSKI 725 >gi|110633071|ref|YP_673279.1| glycyl-tRNA synthetase subunit beta [Mesorhizobium sp. BNC1] gi|110284055|gb|ABG62114.1| glycyl-tRNA synthetase beta chain [Chelativorans sp. BNC1] Length = 789 Score = 879 bits (2272), Expect = 0.0, Method: Composition-based stats. Identities = 348/760 (45%), Positives = 473/760 (62%), Gaps = 58/760 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ +YWTP RL L ++G++ Sbjct: 29 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDGLVEAGLTYEAATEYWTPRRLALDIRGVT 88 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++AI GFLR GL I+ + DPKKG Y+AV+ K R Sbjct: 89 ARSRDVREEIKGPSTSAPEQAIQGFLRKAGLTDIAQAHVHTDPKKGGFYVAVIEKNGRPA 148 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMRW + W+RPL+SI+C E + ++D ++ Sbjct: 149 EEIIAELMPAVIRNFPWPKSMRWGKASRNPGSLRWVRPLQSIVCTFGPETEEPVVVDFEI 208 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+TYGHRFHAP I V+ D Y+ LE+A V+LD E R+ IL+DA LA A G Sbjct: 209 DGIRAGNVTYGHRFHAPEAITVRRFDDYVEKLEQAKVVLDAERRKRIILDDAKNLAFANG 268 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--GV 298 LELVED+ LLEE+ GLVE+ V MG F++ YL +P E++RLTI+ NQKCFVTR + Sbjct: 269 LELVEDEGLLEEVSGLVEYPVVLMGEFEEAYLEIPAEVVRLTIRANQKCFVTRPQGELEK 328 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FI+ +NI+A+DGG I GN +VV ARL DAL+FWK DQ +LP++ LK SA KF Sbjct: 329 LSNRFIITANIEATDGGKEIAYGNGKVVRARLSDALYFWKTDQADLPDIDRLKGSAEKFG 388 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL+KPLDQRMARL+ L+V FHAK+GTQGERV RIR L +++A ++ AD L +RA VL+ Sbjct: 389 LDLNKPLDQRMARLEHLNVTFHAKLGTQGERVERIRRLARELAPIVGADPDLAERAAVLA 448 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA LQ E+ S A+EEH KP GP + VPT+ +S+ V+ Sbjct: 449 KADLTTEVVGEFPELQGAMGRKYAELQGEHPSVARALEEHYKPLGPSDIVPTDPVSVAVA 508 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--------- 529 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRI++EN + + L + Sbjct: 509 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIVVENGVRLALLKAFRKARNVSAE 568 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE-------------------------- 563 ++L+ FFHDRLK+YL D+ RHDLI+A+L Sbjct: 569 NTEDLLSFFHDRLKVYLRDQGARHDLIDAVLASGRPISPLEGEMSPKATEGGAVPPTSQS 628 Query: 564 ---------------------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 ND+LL IV ++ L++ + G+ L KR ILA Sbjct: 629 VTPPSALPGISPSRGEITPSSNDDLLLIVRRVEALSDLLGTETGQNLLAGTKRAANILAA 688 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EEKK I+ + P L E E RL++ ++ E++ + + L ++ EPI+ Sbjct: 689 EEKKGTRIAEAVDPALLKEEQEIRLFSAVNQAEKEAGEAIQKQDFSAAMTALAALREPID 748 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 FF++VLVN ++ +R NRL+LLQ I+ V + KI Sbjct: 749 SFFEKVLVNDENDSIRANRLALLQRIREATGRVADFSKIA 788 >gi|13476182|ref|NP_107752.1| glycyl-tRNA synthetase subunit beta [Mesorhizobium loti MAFF303099] gi|25009337|sp|Q986B5|SYGB_RHILO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|14026942|dbj|BAB53538.1| glycyl-tRNA synthetase, beta chain [Mesorhizobium loti MAFF303099] Length = 718 Score = 873 bits (2256), Expect = 0.0, Method: Composition-based stats. Identities = 353/717 (49%), Positives = 473/717 (65%), Gaps = 15/717 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL +L L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKMLTDGLVEAGLTYEAAREYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GFLR GL +++D + DPKKGD Y+A + KP R Sbjct: 61 ARSKDIREEIKGPSTTAPEQAVQGFLRKAGLSSVADAHVHSDPKKGDFYVAHISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + + W+RPL+S+LC E + ++D ++ Sbjct: 121 EEIIAQLVPGIIRNFPWPKSMRWGPASAKPGSLRWVRPLQSVLCTFGPETEEPVVVDFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GNITYGHRF AP I V+ D Y+ LE A V+LD + R+ IL DA LA A G Sbjct: 181 DGIRSGNITYGHRFLAPGEITVRRFDDYVSKLEAAKVVLDADRRKEIILADARNLAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-- 298 L+LVED+ LLEE+ GLVEW V MG F++ +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGEFEEAFLAIPAEVIRLTIRANQKCFVTRPQGEGEA 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FIL SNI+A DGG I GN +VV ARL DAL+FW DQ +LP+L L+ SA KF Sbjct: 301 LSNRFILTSNIEARDGGKEIAHGNGKVVRARLSDALYFWTTDQGDLPDLGQLEASAEKFG 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL+KPLDQRMARLD L+V FHAK+GTQGERV RIR L +++A + AD L RA VL+ Sbjct: 361 LDLNKPLDQRMARLDHLNVTFHAKLGTQGERVERIRRLAEELAPTVGADPVLAARAAVLA 420 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ S AIEEH KP+GP + VP++ +S+ V+ Sbjct: 421 KADLQTEVVGEFPELQGAMGRKYALLQGEHPSVAAAIEEHYKPQGPSDYVPSDPVSVAVA 480 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------ 532 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG++RI++E++I + LS Sbjct: 481 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVVRILVEDRIQLRLSSIFASAGACYAG 540 Query: 533 -------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +L+ FFHDRLK+YL D+ RHDLI+A++ P++D+LL IV ++ L F + Sbjct: 541 SGADQTRDLLAFFHDRLKVYLRDQGARHDLIDAVITPQSDDLLQIVRRVEALGSFLDTED 600 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G+ L KR ILA EEKK ++ + P AEK L+A ++ E++ ++ Sbjct: 601 GKNLLAGTKRAANILAAEEKKKTAVAKTVEPALFKENAEKSLFAAVNQAEKQAGEAIQNE 660 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L ++ EP++ FF+ VLVN +D EVR NRL+LL I+ V + KI Sbjct: 661 DFSAAMLALSALREPVDSFFEGVLVNDEDLEVRANRLALLTRIRAATGQVADFSKIA 717 >gi|319784744|ref|YP_004144220.1| glycyl-tRNA synthetase subunit beta [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170632|gb|ADV14170.1| glycyl-tRNA synthetase, beta subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 706 Score = 871 bits (2251), Expect = 0.0, Method: Composition-based stats. Identities = 351/705 (49%), Positives = 472/705 (66%), Gaps = 3/705 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL +L L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLRKMLTDSLVEAGLTYEAAREYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GFLR GL +I++ + DPKKGD Y+A + KP R Sbjct: 61 ARSKDINEEIKGPSTSAPEQAVQGFLRKAGLSSIAEAHVHSDPKKGDFYVAHISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ +VP I+ PWPKSMRW + + + W+RPL+SILC E + +ID ++ Sbjct: 121 EQIIAELVPGIIRNFPWPKSMRWGPSSAKPGSLRWVRPLQSILCTFGPETEEPVVIDFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GNITYGHRFHAP I V+ D Y+ LE A V+LD + R+ IL DA LA A G Sbjct: 181 DGIRSGNITYGHRFHAPDAITVRRFDDYVSKLEAAKVVLDADRRKEIILADARNLAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EGV 298 L+LVED+ LLEE+ GLVEW V MG F++ +L +P E+IRLTI+ NQKCFVTR + + Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGEFEEAFLAIPAEVIRLTIRANQKCFVTRPQGVDDA 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FIL +NI+A DGG I GN +VV ARL DAL+FW DQ +LP+L+ L+ SA KF Sbjct: 301 LSNRFILTANIEARDGGKEIAHGNGKVVRARLSDALYFWTTDQGDLPDLAELEASAEKFG 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL KPLDQRMARLD L V FHAK+GTQGERV RI+ L +++A ++ AD AL RA VL+ Sbjct: 361 LDLKKPLDQRMARLDHLGVTFHAKLGTQGERVERIKRLAEELAPIVGADPALARRAAVLA 420 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ S A EEH KP+GP + V ++ +SITV+ Sbjct: 421 KADLTTEVVGEFPELQGAMGRKYALLQGEHASVAAAAEEHYKPQGPSDRVSSDPVSITVA 480 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-F 537 LADKLD L+ FWAI+EKP+GSKDPYALRRA LG++RI++EN I + L+ + + +L F Sbjct: 481 LADKLDMLVGFWAIDEKPTGSKDPYALRRAALGVVRILVENDIRLALAAIVGKASDLLSF 540 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 FHDRLK+YL D+ RHDLI+A++ P++D+LL IV ++ L F + G+ L KR Sbjct: 541 FHDRLKVYLRDQGARHDLIDAVITPQSDDLLQIVRRVEALGAFLDTEDGKNLLAGTKRAA 600 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 ILA EEKK ++ + P + EK L+A ++ E++ + + L + Sbjct: 601 NILAAEEKKKTAVAETVEPALFRADTEKSLFAAVNQAEKQAGEAIQNDDFSGALLALSVL 660 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 EP++ FF+ VLVN +D+ VR NRL+LL I+ V + +I Sbjct: 661 REPVDSFFEHVLVNDEDQAVRANRLALLARIRAATGQVADFSRIA 705 >gi|315122428|ref|YP_004062917.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495830|gb|ADR52429.1| glycyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 700 Score = 869 bits (2245), Expect = 0.0, Method: Composition-based stats. Identities = 544/702 (77%), Positives = 609/702 (86%), Gaps = 3/702 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEIYSEEIPARMQ KA EDL + LLKE G+ Y+++RQYWTP RLF+YLKGL+ Sbjct: 2 MLGFLLEIYSEEIPARMQRKATEDLGKNVTRLLKEYGLSYESIRQYWTPRRLFVYLKGLT 61 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P SPEKIEERLGPRVGA +KAI+GFL STGL+ ISDC+IKKDPKKGD+YLAV++KPKRL Sbjct: 62 PSSPEKIEERLGPRVGASQKAIEGFLHSTGLKKISDCKIKKDPKKGDLYLAVIKKPKRLA 121 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++K IVP+AIQ VPWPKSMRWST +SP+S FSWIRPL+SILC+L +++ K IIDL+L Sbjct: 122 EDIIKEIVPIAIQNVPWPKSMRWSTNNSPVSDFSWIRPLQSILCVLFSKEGKSTIIDLNL 181 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 K IPCGNITYGHRFHAP PIKV+ LD YI LE+A VLLDPE RRN IL DA L+S G Sbjct: 182 KGIPCGNITYGHRFHAPQPIKVKCLDSYISGLEKAKVLLDPEHRRNTILRDARLLSSVNG 241 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +ELVED LLEEI+GLVEWVQV +GSFD+KYLCLPEELIRLTIKTNQKCFVTRTR+G LA Sbjct: 242 VELVEDDGLLEEIVGLVEWVQVLIGSFDEKYLCLPEELIRLTIKTNQKCFVTRTRQGKLA 301 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSNIQASDGG AIVQGNS+VVAARLEDALHFWKRDQ NLP++ SLKESALKFNLD Sbjct: 302 NRFILVSNIQASDGGIAIVQGNSKVVAARLEDALHFWKRDQENLPDIDSLKESALKFNLD 361 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 LSKPLDQRMA+LD L+VVFHAKIGTQGERVSRIR+LGKKIAQLI D+ALVDRA VL KA Sbjct: 362 LSKPLDQRMAKLDALNVVFHAKIGTQGERVSRIRLLGKKIAQLIGVDIALVDRAAVLLKA 421 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DLCT+IVREFPELQGKIGKEYA LQNE AIEEHLKPRGPLE VPT+KISIT+SLA Sbjct: 422 DLCTDIVREFPELQGKIGKEYANLQNET--IVLAIEEHLKPRGPLETVPTDKISITLSLA 479 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTLINFWAINEKPSGS+DPYALRRA LGIIRIILENKI IPLSQF+EDQNLILFFH Sbjct: 480 DKLDTLINFWAINEKPSGSQDPYALRRAALGIIRIILENKIHIPLSQFVEDQNLILFFHV 539 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 RLKLYL + IRHDLIEAIL+PENDNLL IVDLIK+LNEFF+S KG+ FL SAKRI QIL Sbjct: 540 RLKLYLREIGIRHDLIEAILQPENDNLLVIVDLIKYLNEFFNSEKGKNFLFSAKRILQIL 599 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 AIEEKK REI L I+PQ LEAEK+LY VISD HI++SM + YH+IGDLL S+ EP Sbjct: 600 AIEEKKGREI-LPIAPQKFSLEAEKKLYTVISDLDLHIKDSMHNNAYHRIGDLLFSLHEP 658 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 IE FFD V+VNV+D+EVR+NRL+LLQ K II+ V ++QKIV Sbjct: 659 IESFFDNVMVNVEDQEVRNNRLALLQCTKKIIMKVFDIQKIV 700 >gi|15964608|ref|NP_384961.1| glycyl-tRNA synthetase subunit beta [Sinorhizobium meliloti 1021] gi|307309354|ref|ZP_07589017.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] gi|307320090|ref|ZP_07599511.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|81854356|sp|Q92RL2|SYGB_RHIME RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|15073786|emb|CAC45427.1| Probable glycyl-tRNA synthetase beta chain [Sinorhizobium meliloti 1021] gi|306894305|gb|EFN25070.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|306900223|gb|EFN30841.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] Length = 721 Score = 864 bits (2234), Expect = 0.0, Method: Composition-based stats. Identities = 363/719 (50%), Positives = 479/719 (66%), Gaps = 18/719 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR+ A +KAI+GFLR+ GL ++S+ + DPKKGD Y+A + KP R Sbjct: 61 ARSADLREERKGPRIDANEKAIEGFLRAAGLSSLSEAHVHNDPKKGDFYVAHIVKPGREA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMR + + W+RPL+SI+C AE + K+I ++ Sbjct: 121 EEIIADVMPAIIRDFPWPKSMRSGAASAKPGSLRWVRPLQSIVCTFGAEHDETKVIPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ Y LE+A V++D E R+ I DAH +A A G Sbjct: 181 DGIVASNITYGHRFHAPEAITVRRFADYAEKLEKAKVVIDAERRKEIISADAHNVAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW +V MGSF++ YL +P E+IRLTIKTNQKCFVTR L Sbjct: 241 LELVEDEGLLEEVAGLVEWPRVLMGSFEESYLEIPSEIIRLTIKTNQKCFVTRKPGAETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+A DGG I GN +VV ARL DA HFWKRDQ++LP+L +L SA KF L Sbjct: 301 SNRFILVSNIEAKDGGKEIAHGNGKVVRARLSDAAHFWKRDQSDLPDLETLTASAEKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L +A+L AD A VDRA+VL+K Sbjct: 361 DLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSLAAALARLTGADAASVDRAVVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G +YAVLQ E + DAIE+H KP+GP + VPT+ +S TV+L Sbjct: 421 ADLRTEAVGEFPELQGIMGHKYAVLQGEAAAVADAIEDHYKPQGPSDRVPTDPVSATVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+ILE +PL + Sbjct: 481 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLILEGSARLPLLPCFDVALAALKAQ 540 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK+YL D R+DLI+A+L P+ D+LL I ++ L F + Sbjct: 541 RPDIRAEISADLLAFFHDRLKVYLRDLGARYDLIDAVLAPDADDLLMIARRVEALTAFIT 600 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + +G L KR QILA EEKK E++ + L+AE+ L+A I ++++ Sbjct: 601 AEEGRNLLTGTKRATQILAAEEKKGTEVAESVDEALFRLDAERTLHASIKVASDDARDAI 660 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + P++ FF+ VLVN +D+ +R NRL+LL I++ V + KI Sbjct: 661 VKEDFRSAMQALSKLRAPVDDFFNDVLVNDEDKAIRANRLALLGLIRSATGEVADFSKI 719 >gi|114705267|ref|ZP_01438175.1| glycyl-tRNA synthetase beta subunit [Fulvimarina pelagi HTCC2506] gi|114540052|gb|EAU43172.1| glycyl-tRNA synthetase beta subunit [Fulvimarina pelagi HTCC2506] Length = 759 Score = 861 bits (2225), Expect = 0.0, Method: Composition-based stats. Identities = 347/757 (45%), Positives = 454/757 (59%), Gaps = 56/757 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++G+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDVRGVD 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPR A +KAI GFLR GL +I + + + DPKKGD Y+AV+RKP R Sbjct: 61 ASSKNVNEERKGPRTDAPEKAIQGFLRGAGLSSIEEAETRSDPKKGDFYVAVIRKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ ++P I+ PWPKSMRW + W+RPL+SILC E + ++D ++ Sbjct: 121 EQIIAEVMPGIIRNFPWPKSMRWGPASREPGSMRWVRPLQSILCTFGPETEEPVVVDFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRFHAP V+ D Y+ LE+A V+LD E R+ I DA A A+G Sbjct: 181 SGIRSGNTTVGHRFHAPESFMVRRFDDYVDKLEKAHVILDAERRKEMIRTDAENRAFALG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR------- 293 LE+V D+ LLEE+ GLVEW V MGSFD+ +L +P E+I+LTIK NQKCFVTR Sbjct: 241 LEVVPDEGLLEEVSGLVEWPVVLMGSFDEAFLAIPPEVIQLTIKVNQKCFVTRPVGSEPQ 300 Query: 294 ------------------------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAAR 329 + L+N F+L+SNI+ASDGG I +GN +VV AR Sbjct: 301 ARKAERPSPGQGAPAEPSAQQTGVSENNRLSNHFVLISNIEASDGGEEIARGNGKVVRAR 360 Query: 330 LEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGER 389 L DAL+FWK DQ +LP+L SL+ SA KF LDL+KPLDQRMA+LD V FHAK+GTQGER Sbjct: 361 LSDALYFWKTDQADLPDLKSLEPSAEKFGLDLTKPLDQRMAKLDAQGVTFHAKLGTQGER 420 Query: 390 VSRIRVL------------------GKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 V RI L + A + V RA VLSKADL TE V EFP Sbjct: 421 VQRIAALAEAIAGEIAAQVTGNGVATSEDAFAAGELRSTVRRAAVLSKADLPTEAVGEFP 480 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 ELQG +G+ YA LQ E+ S AIEEH KP GP + VP + ++I V+LADKLD L+ FWA Sbjct: 481 ELQGLMGRYYAKLQGEHPSVQAAIEEHYKPLGPGDQVPRDPVAICVALADKLDMLVGFWA 540 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDI 551 I+EKP+GSKDPYALRRA LG+IRI+++N++ + F +L+ FFHDRL + L D Sbjct: 541 IDEKPTGSKDPYALRRAALGVIRILVDNRLVLKFGNFDVSSDLLAFFHDRLMVQLRDSGA 600 Query: 552 RHDLIEAILRP----ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN 607 RHDL++A+L ND+LL I ++ L +F + G+ L +R ILA EEKK Sbjct: 601 RHDLVDAVLSGSGEQSNDDLLDITRRVEALGQFLGAEDGQNLLAGYRRAANILAAEEKKG 660 Query: 608 REISLEISPQYLL---LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 I+ + ++ EK L I + E+++ + Y Q L + P++ F Sbjct: 661 TTIAASVDADWIAAKGEHEEKVLAGAIDRAEIEVAEALETRDYGQAMAGLSKLRAPVDSF 720 Query: 665 FDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FDKVLVNAEDETVRANRLALLARIRAACEKVADFSKI 757 >gi|150395691|ref|YP_001326158.1| glycyl-tRNA synthetase subunit beta [Sinorhizobium medicae WSM419] gi|229558576|sp|A6U6P3|SYGB_SINMW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|150027206|gb|ABR59323.1| glycyl-tRNA synthetase, beta subunit [Sinorhizobium medicae WSM419] Length = 721 Score = 860 bits (2223), Expect = 0.0, Method: Composition-based stats. Identities = 360/719 (50%), Positives = 480/719 (66%), Gaps = 18/719 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR+ A KAI+GFLR+ GL +IS+ + DPKKGD Y+A + + R Sbjct: 61 ARSADMREERKGPRIDANDKAIEGFLRAAGLSSISEAHVHNDPKKGDFYVAHIVRRGREA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P I+ PWPKSMR + + W+RPL+SI+C AE + K+I ++ Sbjct: 121 EEIVADVMPAIIRDFPWPKSMRSGAASAIPGSLRWVRPLQSIVCTFGAEHDETKVIPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ Y L +A V++D E R+ I DAH +A A G Sbjct: 181 DGIVASNITYGHRFHAPEAIAVRRFADYAEKLGKAKVVIDAERRKEIISADAHNIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW +V MGSF++ YL +P E+IRLTIKTNQKCFVTR L Sbjct: 241 LELVEDEGLLEEVAGLVEWPKVLMGSFEESYLAIPSEIIRLTIKTNQKCFVTRKPGAETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+A DGG IV GN +VV ARL DA HFWKRDQ +LP+L +L SA KF L Sbjct: 301 SNRFILVSNIEAKDGGKEIVHGNGKVVRARLSDAAHFWKRDQGDLPDLETLAASAGKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR L +A++ AD A V RA VL+K Sbjct: 361 DLKKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSLAAALAKITGADPASVARAAVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G +YAVLQ E+ + +AIE+H KP+GP ++VPT+ +S++V+L Sbjct: 421 ADLRTEAVGEFPELQGIMGHKYAVLQGESAAVANAIEDHYKPQGPSDHVPTDPVSVSVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADKLDTL+ FWAI+E+P+GSKDPYALRRA LG+IR+ILE + +PL + Sbjct: 481 ADKLDTLVGFWAIDERPTGSKDPYALRRAALGVIRLILEGRARLPLLPCFDVALASLKLQ 540 Query: 533 ----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK+YL D RHDLI+A+L P+ D+LL I ++ L F + Sbjct: 541 RPAMAADVSGDLLAFFHDRLKVYLRDLGARHDLIDAVLAPDADDLLMIARRVEALTAFIT 600 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + +G L KR QILA EEKK E++ + + L+AE+ LYA I + ++ Sbjct: 601 AEEGRNLLAGTKRATQILAAEEKKGTEVAASVDEELFRLDAERLLYASIKVASDGARAAI 660 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + EP++ FF+ VLVN +D+ +R NRL+LL I++ V + KI Sbjct: 661 AKEDFRSAMEALSKLREPVDAFFNDVLVNDEDKAIRANRLALLGLIRSATGEVADFSKI 719 >gi|222147719|ref|YP_002548676.1| glycyl-tRNA synthetase subunit beta [Agrobacterium vitis S4] gi|221734707|gb|ACM35670.1| glycyl-tRNA synthetase beta chain [Agrobacterium vitis S4] Length = 764 Score = 859 bits (2220), Expect = 0.0, Method: Composition-based stats. Identities = 367/763 (48%), Positives = 481/763 (63%), Gaps = 61/763 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L + G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKLVTDALVDAGLTYEGAREYWTPRRLVLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GP V A +KAI+GFLR GL +I +K DPKKGD Y+A++ KP R Sbjct: 61 ARSADVKEEKKGPSVSAPEKAIEGFLRGAGLASIDQAVVKTDPKKGDFYVAMIDKPGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E+++ +P I+ PWPKSMR P + W+RPL+SILC + Sbjct: 121 EEIITEAMPGIIRSFPWPKSMRSGAASMPKGSRYGGIEGKGSESLRWVRPLQSILCTFGS 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + II D+ I NITYGHRFHAP I V+ D Y+ LE+A V+LD E R++ I Sbjct: 181 EHDEVAIIPFDIDGITASNITYGHRFHAPEAITVRRFDDYVSSLEKAKVILDAERRKDII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA +A A GL+LVED+ LLEE+ GLVE+ QV +G+F+ YL +P E+IRLTIKTNQK Sbjct: 241 LHDARDVAFANGLDLVEDEGLLEEVSGLVEYPQVLLGTFEADYLSIPSEIIRLTIKTNQK 300 Query: 289 CFVTRT--REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 CFVTR L+N FIL+SNI A DGGA I+ GN +VV ARL DALHFWKRDQ NLP+ Sbjct: 301 CFVTRPIGESEKLSNHFILISNIAAHDGGAEIIHGNGKVVRARLSDALHFWKRDQGNLPD 360 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L +L+ SA KF LDL KPLDQRMA+LD L+V FHAK+G+QGERV+RIR L K +A ++ A Sbjct: 361 LETLEASAAKFGLDLKKPLDQRMAKLDALNVTFHAKLGSQGERVARIRDLAKVLAPVVGA 420 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 D ALVDRA+VL+KADL TE V EFPELQG +G++YA LQ E+ S AIE+H KP+GP + Sbjct: 421 DEALVDRAVVLAKADLRTEAVGEFPELQGLMGRKYATLQGEHESVAAAIEDHYKPQGPSD 480 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P +K++ITV+LADKLDTL+ FWAINEKP+GSKDP+ALRRA LG +RI+LE I + L Sbjct: 481 RLPEDKVAITVALADKLDTLVWFWAINEKPTGSKDPFALRRAALGDVRILLEKNIRLSLL 540 Query: 527 QFIEDQ-----------------------------------------------NLILFFH 539 +L+ FFH Sbjct: 541 DVFAHSLLGRSLTSEEIERIIDAAIYESVAGGAPKDSTSSKYSQEFASVFLGGSLLSFFH 600 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DRLK+YL D+ RHD+I+A+L PE D+LL + + L F +S G+ L KR Q+ Sbjct: 601 DRLKVYLRDQGARHDIIDAVLTPEADDLLMVARRAEALTAFITSEDGKNLLAGTKRATQL 660 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK ++ +S L L+AEK LYA I E++ + + L ++ Sbjct: 661 LAAEEKKGTVVADGVSEALLTLDAEKALYAAIVQATQSAAEAVAKEDFRSAMQALSTLRA 720 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 P++ FF+ VLVN +D +R NRL+LL+ I+ V + KI Sbjct: 721 PVDTFFEDVLVNDEDAAIRANRLALLKAIREATGTVADFSKIA 763 >gi|227821046|ref|YP_002825016.1| glycyl-tRNA synthetase subunit beta [Sinorhizobium fredii NGR234] gi|254781859|sp|C3MHD5|SYGB_RHISN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|227340045|gb|ACP24263.1| glycyl-tRNA synthetase beta chain [Sinorhizobium fredii NGR234] Length = 721 Score = 858 bits (2217), Expect = 0.0, Method: Composition-based stats. Identities = 365/719 (50%), Positives = 482/719 (67%), Gaps = 18/719 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDIRGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI+GFLR+ GL +I D + DPKKGD Y+A + KP R Sbjct: 61 ARSADVREERKGPRTDANEKAIEGFLRAAGLSSIGDAHVHSDPKKGDFYVAHIVKPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ ++P I+ PWPKSMR + + W+RPL+SI+C AE + ++I + Sbjct: 121 EDIVAEVMPAIIRDFPWPKSMRSGAASAKPGSLRWVRPLQSIVCTFGAETEETRVIPFAV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRFHAP I V+ Y LE+A V+LD E R+ I DA +A A G Sbjct: 181 DGITASNITYGHRFHAPEAIMVRRFADYADKLEKAKVVLDAERRKEIIGADARNIAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ GLVEW +V MGSF++ YL +P E+IRLTIKTNQKCFVTR L Sbjct: 241 LELVEDEGLLEEVTGLVEWPRVLMGSFEESYLEIPSEIIRLTIKTNQKCFVTRQPGAETL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N FILVSNI+A DGG IV GN +VV ARL DA HFWKRDQ +LP+L +LK SA KF L Sbjct: 301 SNRFILVSNIEAKDGGKEIVHGNGKVVRARLSDAAHFWKRDQGDLPDLETLKPSAEKFGL 360 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 DL KPLDQRMA+LD L+V FHAK+GTQGERV+RIR + +A++ AD ALV+R++VL+K Sbjct: 361 DLGKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSIALALAEVTGADQALVERSVVLAK 420 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE V EFPELQG +G +YAVLQ E+ + +AIE+H KP+GP + VPT+ +S V+L Sbjct: 421 ADLRTEAVGEFPELQGIMGHKYAVLQGEDAAVANAIEDHYKPQGPSDRVPTDAVSAAVAL 480 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL FWAI+EKP+GSKDPYALRRA LG+IR+ILE + +PL F + Sbjct: 481 ADKLDTLAGFWAIDEKPTGSKDPYALRRAALGVIRLILEGRTRLPLLPFFDVALKALRTQ 540 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +L+ FFHDRLK+YL D R+DLI+A+L E D+LL I ++ L F + Sbjct: 541 RPDLTGDIAADLLAFFHDRLKVYLRDLGARYDLIDAVLTSEADDLLMIARRVEALTAFIT 600 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + +G+ L KR QILA EEKK E++ ++ + L+AE+ L+A I +E++ Sbjct: 601 AEEGKNLLAGTKRATQILAAEEKKGTEVADQVDERLFRLDAERTLHASIKLASDDAREAI 660 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L + EP+++FF+ VLVN +DR +R NRL+LL I++ V + KI Sbjct: 661 GKEDFRSAMAALSKLREPVDVFFNDVLVNDEDRAIRANRLALLGLIRSATGEVADFSKI 719 >gi|239831279|ref|ZP_04679608.1| glycyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] gi|239823546|gb|EEQ95114.1| glycyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] Length = 765 Score = 851 bits (2198), Expect = 0.0, Method: Composition-based stats. Identities = 348/763 (45%), Positives = 457/763 (59%), Gaps = 61/763 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L E G+ Y+ YWTP RL L ++GL+ Sbjct: 2 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVEAGLTYEAATAYWTPRRLALDIRGLT 61 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 62 VRSKDVHEDIKGPSVTAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 121 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + + W+RPL+SILC E + +ID D+ Sbjct: 122 EEIVAELVPHTIRNFPWPKSMRWGAASAKPGSLRWVRPLQSILCTFGPETEETVVIDFDV 181 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 182 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 241 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVED+ LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 242 GLELVEDEGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGETE 301 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSNI A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF Sbjct: 302 ALSNKFILVSNIAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAQKF 361 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL Sbjct: 362 GLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVSADPKLATRAAVL 421 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G++YA+LQ E + AIEEH KP+GP + VP N +S+ V Sbjct: 422 AKADLQTEVVGEFPELQGAMGRKYALLQGEGETVAAAIEEHYKPQGPSDVVPKNPVSVAV 481 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------- 529 +LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL Sbjct: 482 ALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALK 541 Query: 530 --EDQNLILFFHDRL--------------------------------------------- 542 + Q + F RL Sbjct: 542 EGQVQRKLREFEARLAAENSGDVDGEQDVDNALASYEKLARAEAEASSEPVLGDLLSFLH 601 Query: 543 ---KLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 K++L D R+D I+A+L PE DNLL + ++ L F + G+ L KR I Sbjct: 602 DRFKVHLKDEGARYDAIDAVLSPEADNLLLVARRLEALIVFINEEDGKNLLAGTKRAANI 661 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK +++ + P L EK L+ +S + ++ + ++ L + Sbjct: 662 LAAEEKKGTKVADHVDPALLREAEEKALFEAVSLASKDAEAAIAREDFNGAMLALAKLRG 721 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 P++ FF++VLVN +D VR NRL+LL I+ V + KI Sbjct: 722 PVDTFFEKVLVNDEDENVRANRLALLDQIRAATGKVADFSKIA 764 >gi|90420145|ref|ZP_01228053.1| glycyl-tRNA synthetase, beta chain [Aurantimonas manganoxydans SI85-9A1] gi|90335479|gb|EAS49229.1| glycyl-tRNA synthetase, beta chain [Aurantimonas manganoxydans SI85-9A1] Length = 724 Score = 850 bits (2197), Expect = 0.0, Method: Composition-based stats. Identities = 340/722 (47%), Positives = 460/722 (63%), Gaps = 21/722 (2%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL ++ L E G+ Y+ R+YWTP RL L ++G+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLRKLVTDALVEAGLTYEGCREYWTPRRLTLDVRGVD 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + ++ER GPR A +KAI GFLR GL +I + I+ DPKKGD Y+A +RKP R Sbjct: 61 ARSRDVVDERKGPRTDAPEKAIQGFLRGAGLASIDEATIQSDPKKGDFYVATIRKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++P ++ PWPKSMRW + W+RPL+SILC E + ++D ++ Sbjct: 121 EEIIAEVMPGIVRGFPWPKSMRWGPASREPGSLRWVRPLQSILCTFGPETEEPVVVDFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+T GHRFHA +V+ D Y+ LE+A V+LD E R++ I +DA LA A G Sbjct: 181 DGIRAGNVTRGHRFHAAEEFRVRRFDDYVAGLEKAFVVLDAERRKDMIRHDAENLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EGV 298 LE+V D+ LLEE+ GLVEW MG F++ +L +P E+I+LTIK NQKCFVTR + +G Sbjct: 241 LEVVPDEALLEEVSGLVEWPVTLMGEFEETFLQIPPEVIQLTIKVNQKCFVTRRQGGDGT 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N F+LVSNI ASDGGA I +GN +VV ARL DAL+FW+ DQ +LP +L +A KF Sbjct: 301 LSNQFVLVSNIAASDGGAEIARGNGKVVRARLSDALYFWQTDQADLPGRDALAPAAEKFR 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--------- 409 LDL+KPLDQRMA+LD L V FHA++GTQGERV RI L ++IA + D A Sbjct: 361 LDLAKPLDQRMAKLDALGVTFHARLGTQGERVGRIAALAREIAATVYPDGATLGGASVSA 420 Query: 410 -----LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 LV RA VL+KADL TE V EFPELQG +G+ YA LQ E+ S A+EEH KP GP Sbjct: 421 DELKPLVTRAAVLAKADLTTEAVGEFPELQGLMGRYYAALQGEHPSVQAALEEHYKPLGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 ++VPT+ ++I V+LADKLD L+ FWAI+EKP+GSKDPYALRRA LG+IR++L+N++ + Sbjct: 481 TDSVPTDPVAICVALADKLDMLVGFWAIDEKPTGSKDPYALRRAALGVIRLVLDNELVMA 540 Query: 525 LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAIL-----RPENDNLLTIVDLIKHLNE 579 L F+ +L+ FFHDRLK+ L + RHDL++A+L D+LL + + L Sbjct: 541 LGGFMPASDLLAFFHDRLKVQLRESGARHDLVDAVLSGGSGGDRGDDLLDVTRRVTALGA 600 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + G+ L +R ILA EEKK ++ +S L EK L I + Sbjct: 601 FLDTEDGQNLLAGTRRAANILAAEEKKGTRVADAVSLDLLSEHEEKVLAGAIDRAEIELD 660 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + Y L + P++ FF+ VLVN +D VR NRL+LL I+ V + Sbjct: 661 AALAVENYAHAMTALAELRIPVDAFFETVLVNAEDEAVRANRLALLDRIRAATRRVADFS 720 Query: 700 KI 701 +I Sbjct: 721 RI 722 >gi|121602631|ref|YP_988699.1| glycyl-tRNA synthetase subunit beta [Bartonella bacilliformis KC583] gi|120614808|gb|ABM45409.1| glycyl-tRNA synthetase, beta subunit [Bartonella bacilliformis KC583] Length = 740 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 336/739 (45%), Positives = 460/739 (62%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL + L + G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKCVTNKLVDAGLTYKAACEYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + ++ IDGFLR+TGL IS+ I D KKGD Y+A + K R+ Sbjct: 61 TKSQDIYEERKGPSTQSPQQVIDGFLRATGLNNISEAHIAHDNKKGDFYIAKIIKKGRIA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ I+P ++ PWPKSMRW + A WIR L++ILC+ + + II + Sbjct: 121 EDIIAEILPDILRNFPWPKSMRWGEDSAKSGALRWIRSLQNILCVFGPQCGETHIIPFTI 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI ++ D YI LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSDGKPIPIRRFDDYIAQLEAHKVILDAERRKNIILVDAKNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVED L+EE+ GLVEW V MG+FDK +L +P E+IRLTI+ NQKCFVTR + + Sbjct: 241 GLELVEDDPLIEEVAGLVEWPVVLMGNFDKAFLDIPPEIIRLTIRANQKCFVTRKQGEKT 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ F+LVSNI ASD G I++GNS+VV ARL DAL+FW++DQ +L N++ LK SA KF Sbjct: 301 KLSSHFVLVSNILASDEGKEIIKGNSKVVHARLSDALYFWQKDQCDLFNIADLKSSAEKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A LD L+V FHAK+GTQGE+V RI L +KIA ++ AD L RA VL Sbjct: 361 DLDLNKPLDQRIANLDRLNVTFHAKLGTQGEKVERISALVQKIAPIVQADSTLAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +GK YA+LQ E+ +AIE+H +P GP + +P ++I V Sbjct: 421 AKADLQTEIVNEFPELQGFMGKTYALLQGEDPRVAEAIEDHYRPLGPTDRIPQEPVTIAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +LADK+DTL+ FW INEKP+ SKDPYALRRA LG+I+++L + I L+ Sbjct: 481 ALADKIDTLVGFWLINEKPTSSKDPYALRRAALGVIKLVLSHNCKINLTSLFHQAINIFL 540 Query: 533 -----------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ F H+RLK++L D +RHD+IEA+L Sbjct: 541 QQKTEYAAYLKESKQTQDTLVKEIDDILSDLLSFLHERLKIHLKDEGVRHDIIEAVLTKN 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+ IV I+ L F ++ G L + KR IL E KK E + I+ + + Sbjct: 601 ADDFSLIVHRIEVLTSFINTNNGNNLLAAIKRAVNILENESKKGNEFASTINLELFIENE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I + + ++ + + L S+ EPI+ FF++VLVN + +R NRL+ Sbjct: 661 EKQLYQAIIAAEKKVNDHINTTDWLSALNALASLKEPIDKFFEKVLVNDKNAAIRANRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL++I I + + KI+ Sbjct: 721 LLEFIHTITQDIADFSKII 739 >gi|49473963|ref|YP_032005.1| glycyl-tRNA synthetase subunit beta [Bartonella quintana str. Toulouse] gi|49239466|emb|CAF25817.1| Glycyl-tRNA synthetase beta chain [Bartonella quintana str. Toulouse] Length = 740 Score = 846 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 338/739 (45%), Positives = 458/739 (61%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL +I L G+ Y+ R+YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKCVIDQLVNAGLTYKAAREYWTPRRLTLDVRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + IDGFLR+TGL IS+ I DPKKGD Y+A + K R Sbjct: 61 IRSKDIHEERRGPSTKSPQHVIDGFLRTTGLNNISEAPIVHDPKKGDFYIAKIIKKGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW + A WIRPL++ILC+ E + ++I + Sbjct: 121 EEIIADILPGIIRNFPWPKSMRWGKDSAKSGALKWIRPLQNILCVFGPEIGETRVIPFTI 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P++++ D YI LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSNGKPLQIRRFDDYITQLEAHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV- 298 GLELVED LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDSALLEEVAGLVEWPVVLMGNFDKSFLDIPPEIIRLTIQANQKCFVTRKQGEKI 300 Query: 299 -LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ FILVSNI ASD G I +GNS+VV ARL DAL+FW+ DQ++LP++ L+ SA K Sbjct: 301 KLSHNFILVSNILASDEGKEISKGNSKVVCARLSDALYFWQTDQHDLPDIKYLQSSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 LDL KPLDQRMARLD L+V FH K+GTQG RV RI L +KIA + AD L RA +L Sbjct: 361 ALDLKKPLDQRMARLDHLNVTFHEKLGTQGARVERIATLAQKIAPSVQADPLLAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G++YA+LQ E+ +AIE+H KP+GP + +P ++I V Sbjct: 421 AKADLQTEVVGEFPELQGFMGRKYALLQEEDPRVAEAIEDHYKPQGPKDRIPQEPLAIAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL--- 534 +LADK+D L+ FW INEKP+GSKDPYALRRA LGIIR++L I L Sbjct: 481 ALADKIDMLVGFWLINEKPTGSKDPYALRRAALGIIRLVLLRDWKINLMPLFHLATNLFL 540 Query: 535 -------------------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + FFH+RLK+YL + +R+D +EA+L + Sbjct: 541 QQKNKDETSRTKTTQSQNLVLEKTEYILSDLLFFFHERLKIYLKEEGVRYDALEAVLNKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+ L + ++ L F +++ G FL + KRI IL E +K I EI+P+ Sbjct: 601 ADDFLLVARRVEALIAFINTSDGGSFLAAVKRIVNILENEIQKGSTIVNEINPELFSETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY VI + +++ ++ + + L + + I+ FF++VLVN + +R NRL+ Sbjct: 661 EKQLYQVIIEAEKKVRDHINAINLSRALNTLAPLRKFIDAFFEKVLVNDKNPNIRTNRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ I N V + K+V Sbjct: 721 LLKRIHNTTQAVADFSKLV 739 >gi|306842309|ref|ZP_07474969.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO2] gi|306287566|gb|EFM59022.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO2] Length = 777 Score = 841 bits (2172), Expect = 0.0, Method: Composition-based stats. Identities = 348/776 (44%), Positives = 460/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EEIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDEAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FW I+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWGIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLK------------------------------- 543 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 544 ---------LYLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEEDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ ++P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADWVNPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDVNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|306845032|ref|ZP_07477613.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO1] gi|306274664|gb|EFM56453.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. BO1] Length = 777 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 350/776 (45%), Positives = 459/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQVHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQSDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQREEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAQKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDEAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLK------------------------------- 543 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 544 ---------LYLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEEDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREAGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDVNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|163842686|ref|YP_001627090.1| glycyl-tRNA synthetase subunit beta [Brucella suis ATCC 23445] gi|163673409|gb|ABY37520.1| glycyl-tRNA synthetase, beta subunit [Brucella suis ATCC 23445] Length = 777 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 350/776 (45%), Positives = 460/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLK------------------------------- 543 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 544 ---------LYLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|17987812|ref|NP_540446.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|17983538|gb|AAL52710.1| glycyl-tRNA synthetase beta chain [Brucella melitensis bv. 1 str. 16M] Length = 780 Score = 837 bits (2163), Expect = 0.0, Method: Composition-based stats. Identities = 350/776 (45%), Positives = 460/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 4 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 63 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 64 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 123 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 124 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 183 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 184 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 243 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 244 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 303 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 304 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 363 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 364 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 423 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 424 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 483 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 484 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 543 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 544 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 603 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 604 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 663 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 664 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 723 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 724 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 779 >gi|299134688|ref|ZP_07027880.1| glycyl-tRNA synthetase, beta subunit [Afipia sp. 1NLS2] gi|298590498|gb|EFI50701.1| glycyl-tRNA synthetase, beta subunit [Afipia sp. 1NLS2] Length = 691 Score = 837 bits (2162), Expect = 0.0, Method: Composition-based stats. Identities = 315/711 (44%), Positives = 433/711 (60%), Gaps = 32/711 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L E++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + GL Sbjct: 1 MPDLLFELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EER GP+VGA A+ GFL++TGL+++ + +I+KDPKKGD Y+A++ KP R Sbjct: 61 GRQPDLKEERKGPKVGAPDAAVQGFLKATGLKSLDEAKIQKDPKKGDFYIALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ I+PV ++ PWPK MRW + A +W+RPL SI+ E ++ D+ Sbjct: 121 IDVIAEILPVIVRTFPWPKQMRWGAGSATRGALTWVRPLHSIIATFGLETEDPDVVKFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ + Y+ LE A V+LDP+ RR+ IL DA +LA A G Sbjct: 181 GGIEAGQVTRGHRFMAPAEFSVRRFEDYVAKLEAAKVVLDPQRRRDIILADAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED+ LLEE+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV R + G L Sbjct: 241 YELVEDEALLEEVAGLVEWPVALMGSFDQDFLSIPGEVIRATIRNNQKCFVVRDPKTGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FILVSNI+A+DGG AIV GN RV+ ARL DA F++ D Sbjct: 301 APKFILVSNIEATDGGKAIVAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + ++VFH K+GTQ ER++RI L +IA L+ ADV RA L+K Sbjct: 342 -LKTKLEARLPKFE--NIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKTKRAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E+ S AIE+H KP+GP + VP + ++I V+L Sbjct: 399 ADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAAAIEDHYKPQGPNDRVPNDPVAIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADK+D L FWAI+EKP+GSKDP+ALRRA LG IR+I +N I +PL Sbjct: 459 ADKIDILTGFWAIDEKPTGSKDPFALRRAALGAIRLIADNGIRLPLLATFAKAAKPHDGK 518 Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FF DRLK+ L ++ RHDL++A+ D+LL +V ++ L +F + G+ L Sbjct: 519 DLLSFFADRLKVQLREQGARHDLVDAVFALGGQDDLLMVVRRVEALGKFLDTDDGKNLLA 578 Query: 592 SAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR ILAIEEKK+ R + L+ EK L A I ++ + + Sbjct: 579 GTKRASNILAIEEKKDKRNFTGAPEASLYKLDEEKNLAAAIEQVKAEAGTAVAKEDFAGA 638 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 639 MGALAKLRPVVDAFFDKVKVNDDDKAVRENRLKLLNEIREATRAVADFSKI 689 >gi|254701212|ref|ZP_05163040.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261751750|ref|ZP_05995459.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261741503|gb|EEY29429.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] Length = 777 Score = 837 bits (2162), Expect = 0.0, Method: Composition-based stats. Identities = 351/776 (45%), Positives = 461/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ IL DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIILQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|225851940|ref|YP_002732173.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis ATCC 23457] gi|254693188|ref|ZP_05155016.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|254707863|ref|ZP_05169691.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|254709553|ref|ZP_05171364.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|254716617|ref|ZP_05178428.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|256031047|ref|ZP_05444661.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|256044124|ref|ZP_05447031.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|256060541|ref|ZP_05450709.1| glycyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261213429|ref|ZP_05927710.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|261218417|ref|ZP_05932698.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261315353|ref|ZP_05954550.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|261317081|ref|ZP_05956278.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|261324535|ref|ZP_05963732.1| glycyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|265988118|ref|ZP_06100675.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|225640305|gb|ACO00219.1| glycyl-tRNA synthetase, beta subunit [Brucella melitensis ATCC 23457] gi|260915036|gb|EEX81897.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|260923506|gb|EEX90074.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261296304|gb|EEX99800.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|261300515|gb|EEY04012.1| glycyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261304379|gb|EEY07876.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|264660315|gb|EEZ30576.1| glycyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] Length = 777 Score = 837 bits (2162), Expect = 0.0, Method: Composition-based stats. Identities = 350/776 (45%), Positives = 460/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|225626913|ref|ZP_03784952.1| glycyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] gi|225618570|gb|EEH15613.1| glycyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] Length = 780 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 351/776 (45%), Positives = 461/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ Sbjct: 4 MPDLLLELFSEEIPARMQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLALDIRGLT 63 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 64 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 123 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 124 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 183 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 184 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 243 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 244 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 303 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 304 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 363 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 364 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 423 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 424 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 483 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 484 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 543 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 544 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGGVDGEQDVDNALANYEKEIRAEAEAS 603 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 604 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 663 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 664 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 723 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 724 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 779 >gi|256368860|ref|YP_003106366.1| glycyl-tRNA synthetase, beta subunit [Brucella microti CCM 4915] gi|255999018|gb|ACU47417.1| glycyl-tRNA synthetase, beta subunit [Brucella microti CCM 4915] Length = 777 Score = 836 bits (2160), Expect = 0.0, Method: Composition-based stats. Identities = 350/776 (45%), Positives = 460/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDMHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|260168178|ref|ZP_05754989.1| glycyl-tRNA synthetase subunit beta [Brucella sp. F5/99] Length = 777 Score = 836 bits (2160), Expect = 0.0, Method: Composition-based stats. Identities = 351/776 (45%), Positives = 461/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGGVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|294851785|ref|ZP_06792458.1| glycyl-tRNA synthetase beta subunit [Brucella sp. NVSL 07-0026] gi|294820374|gb|EFG37373.1| glycyl-tRNA synthetase beta subunit [Brucella sp. NVSL 07-0026] Length = 777 Score = 836 bits (2160), Expect = 0.0, Method: Composition-based stats. Identities = 349/776 (44%), Positives = 459/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATTYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I AH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQYAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|62289391|ref|YP_221184.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 1 str. 9-941] gi|82699319|ref|YP_413893.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis biovar Abortus 2308] gi|189023643|ref|YP_001934411.1| glycyl-tRNA synthetase subunit beta [Brucella abortus S19] gi|237814878|ref|ZP_04593876.1| glycyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|254688705|ref|ZP_05151959.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|254729738|ref|ZP_05188316.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|256256952|ref|ZP_05462488.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|260545857|ref|ZP_05821598.1| glycyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260754182|ref|ZP_05866530.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|260757402|ref|ZP_05869750.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|260883207|ref|ZP_05894821.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297247804|ref|ZP_06931522.1| glycyl-tRNA synthetase beta subunit [Brucella abortus bv. 5 str. B3196] gi|62195523|gb|AAX73823.1| GlyS, glycyl-tRNA synthetase, beta subunit [Brucella abortus bv. 1 str. 9-941] gi|82615420|emb|CAJ10389.1| Glycyl-tRNA synthetase, beta subunit:Heterodimeric glycyl-transfer RNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189019215|gb|ACD71937.1| Glycyl-tRNA synthetase, beta subunit [Brucella abortus S19] gi|237789715|gb|EEP63925.1| glycyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|260097264|gb|EEW81139.1| glycyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260667720|gb|EEX54660.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|260674290|gb|EEX61111.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|260872735|gb|EEX79804.1| glycyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297174973|gb|EFH34320.1| glycyl-tRNA synthetase beta subunit [Brucella abortus bv. 5 str. B3196] Length = 777 Score = 835 bits (2158), Expect = 0.0, Method: Composition-based stats. Identities = 349/776 (44%), Positives = 459/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E + I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERCKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|256159111|ref|ZP_05456932.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|256254450|ref|ZP_05459986.1| glycyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|265997583|ref|ZP_06110140.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|262552051|gb|EEZ08041.1| glycyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] Length = 777 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 351/776 (45%), Positives = 461/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLVLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|148560042|ref|YP_001258428.1| glycyl-tRNA synthetase subunit beta [Brucella ovis ATCC 25840] gi|148371299|gb|ABQ61278.1| glycyl-tRNA synthetase, beta subunit [Brucella ovis ATCC 25840] Length = 777 Score = 834 bits (2155), Expect = 0.0, Method: Composition-based stats. Identities = 349/776 (44%), Positives = 459/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPY LRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYVLRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|23501308|ref|NP_697435.1| glycyl-tRNA synthetase subunit beta [Brucella suis 1330] gi|161618379|ref|YP_001592266.1| glycyl-tRNA synthetase subunit beta [Brucella canis ATCC 23365] gi|254703758|ref|ZP_05165586.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|260566988|ref|ZP_05837458.1| glycyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261754404|ref|ZP_05998113.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|23347197|gb|AAN29350.1| glycyl-tRNA synthetase, beta subunit [Brucella suis 1330] gi|161335190|gb|ABX61495.1| glycyl-tRNA synthetase, beta subunit [Brucella canis ATCC 23365] gi|260156506|gb|EEW91586.1| glycyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261744157|gb|EEY32083.1| glycyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] Length = 777 Score = 834 bits (2154), Expect = 0.0, Method: Composition-based stats. Identities = 350/776 (45%), Positives = 459/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNEFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR +L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRPLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLKL------------------------------ 544 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 545 ----------YLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ + E++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIARED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|49475213|ref|YP_033254.1| glycyl-tRNA synthetase subunit beta [Bartonella henselae str. Houston-1] gi|49238018|emb|CAF27224.1| Glycyl-tRNA synthetase beta chain [Bartonella henselae str. Houston-1] Length = 740 Score = 834 bits (2154), Expect = 0.0, Method: Composition-based stats. Identities = 333/739 (45%), Positives = 457/739 (61%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKSVTDQLVNAGLTYKAAHEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + IDGFLR+TGL IS I D KKGD Y+A + K R Sbjct: 61 IRSKDTHEERKGPSTKSPQHVIDGFLRATGLSDISKAHIAHDHKKGDFYIAKIVKKGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW A WIR L++ILC+ E + +I + Sbjct: 121 EEIIADILPDIIRNFPWPKSMRWGKDSEKSGALKWIRSLQNILCVFGPEIGETHVIPFTI 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P++V+ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSDGKPLQVRRFDDYVTQLEIHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV- 298 GLELV+D LLEE++GL+EW V MG+FDK +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVKDNALLEEVVGLIEWPVVLMGNFDKSFLNIPPEIIRLTIRANQKCFVTRKQGEKI 300 Query: 299 -LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ FILVSNI ASD G I +GNS+VV ARL DAL+FW+ DQ++LP++ L+ SA K Sbjct: 301 KLSHHFILVSNILASDEGKEISKGNSKVVCARLSDALYFWQTDQHDLPDIKYLQSSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL KPLDQRMA+LD L+V FHAK+GTQG RV RI +L ++IA L+ AD L RA VL Sbjct: 361 DLDLKKPLDQRMAQLDHLNVTFHAKLGTQGARVERITILAQQIAPLVHADPFLAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +G++YA+LQ E+ +AIE+H KP+GP + +P ++I V Sbjct: 421 AKADLQTEIVGEFPELQGLMGRKYALLQGEDPRVAEAIEDHYKPQGPADRIPQEPLAIAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL- 536 +LADK+D L+ FW INEKPS SKDPYALRRA LG+IR++L I L + Sbjct: 481 ALADKIDMLVGFWLINEKPSSSKDPYALRRAVLGVIRLVLLRDWKINLMPLFNLTANLFL 540 Query: 537 ---------------------------------FFHDRLKLYLHDRDIRHDLIEAILRPE 563 FFH+RLK+YL + R+D++EA+L+ + Sbjct: 541 QQKTPYGTSRREATQSQNVLPEKTEHILSDLLSFFHERLKIYLKEEGARYDVLEAVLKKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+LL I ++ L F +++ G+ FL + KR IL E +K+ I EI+P+ + Sbjct: 601 ADDLLLIARHVEALIAFINTSDGDSFLAAVKRTVNILEAESQKDSTIEDEINPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I++ + S++ + + L + + I+ FF++VLVN + VR NRL+ Sbjct: 661 EKQLYQAITEIEKTVHHSINATNLPHLLNTLTPLGKFIDTFFEKVLVNDKNPHVRTNRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ I + + K+V Sbjct: 721 LLKRIHTLTQKAADFSKLV 739 >gi|254718585|ref|ZP_05180396.1| glycyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|265983560|ref|ZP_06096295.1| glycyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306839898|ref|ZP_07472696.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] gi|264662152|gb|EEZ32413.1| glycyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306405084|gb|EFM61365.1| glycyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] Length = 777 Score = 833 bits (2152), Expect = 0.0, Method: Composition-based stats. Identities = 348/776 (44%), Positives = 458/776 (59%), Gaps = 74/776 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFL GL +S + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVSAPEQAIQGFLCKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ +VP I+ PWPKSMRW + A W+RPL+SILC E + K+ID D+ Sbjct: 121 EDIVAELVPQTIRNFPWPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + IKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE--- 296 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDAS 300 Query: 297 ------------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 L+N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++L Sbjct: 301 RLASPAPQHEEIQALSNKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDL 360 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 P+L L SA KF LDL KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ Sbjct: 361 PDLDKLAASAEKFGLDLKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLV 420 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AD L RA VL+KADL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP Sbjct: 421 GADPKLAQRAAVLAKADLQTEVVGEFPELQGAMGRKYALLQGEDEAVAAALEEHYKPQGP 480 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + VP N +S+ V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + P Sbjct: 481 SDVVPKNPVSVAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFP 540 Query: 525 LSQFI----------EDQNLILFFHDRLK------------------------------- 543 L + Q + F +L Sbjct: 541 LLPLFRSAFAALQEGQMQRKLREFEAKLATENSGDVDGEQDVDNALANYEKEIRAEAEAS 600 Query: 544 ---------LYLHDR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + HDR R+D I+A+L PE DNLL + ++ L F + G Sbjct: 601 CGPVLADLLSFFHDRFKVYLKDEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEEDG 660 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + L AKR ILA EEKK +++ + P L EK L+ ++ +++ + Sbjct: 661 KNLLAGAKRAANILAAEEKKGTKVADRVDPALLREAEEKALFDAVTLASREAGDAIVRED 720 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ L + P++IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 FNGAMLALAKLRGPVDIFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 776 >gi|319408196|emb|CBI81849.1| glycyl-tRNA synthetase beta chain [Bartonella schoenbuchensis R1] Length = 740 Score = 832 bits (2150), Expect = 0.0, Method: Composition-based stats. Identities = 331/739 (44%), Positives = 452/739 (61%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLE++SEEIPARMQ KAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MSNLLLELFSEEIPARMQRKAASDLKKCVTDQLVHAGLTYKAACEYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + IDGFLR+TGL IS+ I D KKGD Y+A + K R Sbjct: 61 TSSQDTHEERRGPSTKSPQHMIDGFLRATGLNNISEAHIVHDSKKGDFYVAKITKKGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW + A W+R L++ILC+ E + I+ + Sbjct: 121 EEIIADILPDIIRNFPWPKSMRWGQDSAQTGALKWVRSLQNILCVFGPEIGETHIVPFTV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+++ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GFLKSNNLTYGHRFLSDGKPIQIRRFDDYVTLLEAHKVILDTERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV- 298 GLELV+D LLEE+ GLVEW V MG FDK +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVQDNALLEEVAGLVEWPVVLMGDFDKTFLDIPPEIIRLTIRANQKCFVTRKQGEKI 300 Query: 299 -LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSN+ A+DGG I +GNS+VV ARL DAL+FW+ DQ++LP+++ LK+SA KF Sbjct: 301 KLSNHFILVSNVLANDGGKEITKGNSKVVRARLSDALYFWQTDQHDLPDIAHLKDSAAKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A+LD L+V FHAK+GTQG RV RI L +KIA L+ AD L RA +L Sbjct: 361 DLDLNKPLDQRIAQLDYLNVTFHAKLGTQGARVERIAALAQKIAPLVQADPLLAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T IV EFPELQG +G++YA+LQ E+ +AIE+H KP GP + +P I+I V Sbjct: 421 AKADLQTGIVAEFPELQGLMGRKYALLQGEDPHVAEAIEDHYKPLGPTDRIPCEPIAIAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +LADK+D L+ FW INEKP+ SKDPYALRRA LGII+++L I L + Sbjct: 481 ALADKIDILVGFWLINEKPTSSKDPYALRRAALGIIKLVLSRDWKINLMPLFDQAVDLFL 540 Query: 533 -----------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ F H+RLK+YL D R+D IEA+L + Sbjct: 541 QQKIKYTSPKIEAKQQQNTLSETKKDILSDLLSFLHERLKIYLKDEGARYDAIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D+ L + I+ L F ++ G FL S KR+ IL + K+ ++P+ Sbjct: 601 ADDFLLVARCIESLIVFINTNDGNDFLASVKRVVNILENQPSKDITTINTLNPELFSEIE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I D + + + + L + +PI+ FF++VLVN + +R NRL+ Sbjct: 661 EKQLYQAIIDAEKKLHDQTNATNLSLALNALVPLKKPIDTFFEKVLVNDKNSAIRANRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ I+ I V + K+ Sbjct: 721 LLERIRLITQNVADFSKLA 739 >gi|240850063|ref|YP_002971456.1| glycyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] gi|240267186|gb|ACS50774.1| glycyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] Length = 740 Score = 832 bits (2149), Expect = 0.0, Method: Composition-based stats. Identities = 332/739 (44%), Positives = 455/739 (61%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA DL + L G+IY+ R+YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAADLKKSVTDQLVNAGLIYEAAREYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + + IDGFLR+TGL IS+ I D KKG Y+A + K R Sbjct: 61 IRSKDIHEERRGPSIKSPQHVIDGFLRATGLNDISEAHIGHDDKKGHFYIAKIVKKGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PWPKSMRW + A WIRPL++ILC+ E + +I + Sbjct: 121 EEIIADILPNIIRNFPWPKSMRWGKDSAQSGALKWIRPLQNILCVFGPEIGETHVIPFTI 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P +V+ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSDGKPFQVRRFDDYVTQLETHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELV+D LLEE+ GLVEW + MG FD+ +L +P E+IRLTI+ NQKCFVTR + + Sbjct: 241 GLELVQDNPLLEEVAGLVEWPVILMGDFDQSFLDIPPEIIRLTIRANQKCFVTRKQGEKV 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ FILVSNI ++D G I +GNS+VV ARL DAL+FW+ DQ +LP++ L+ S KF Sbjct: 301 KLSHHFILVSNILSNDEGKEISKGNSKVVRARLSDALYFWQTDQRDLPDIQQLESSIKKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LD+ KPLDQRMARLD L+V FHAK+GTQG RV RI L ++I+ LI D L RA +L Sbjct: 361 DLDIKKPLDQRMARLDHLNVTFHAKLGTQGARVERIATLAQEISPLIQTDPLLAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +G++YA+LQ E+ AIE+H KP+GP + +P ++ITV Sbjct: 421 AKADLQTEIVGEFPELQGVMGQKYALLQGEDPRVAVAIEDHYKPQGPTDRLPQEPLAITV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL--- 534 LADK+D L+ FW INEKP+GSKDPYALRRA LG+IR++L I L + Sbjct: 481 MLADKIDMLVGFWLINEKPTGSKDPYALRRAALGVIRLVLSRDWKINLMPLFQLAMNLFL 540 Query: 535 -------------------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + FFHDRLK+YL + R+D +EA+L + Sbjct: 541 KQKNKYEISQRENSQLLNLLPEKTEYILSDLLFFFHDRLKIYLKEEGARYDALEAVLNKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D+ L + ++ L F ++ G F+ S KR IL E +K+ I EI+P+ + + Sbjct: 601 SDDFLLVARRVESLIAFINTHDGMNFVASVKRTANILENEFQKSTTIVNEINPELFVEKE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I + + ++ + +L + + I+IFF++VLVN +VR NRL+ Sbjct: 661 EKQLYHAICEVEKQVLAPINATNLSFVLSVLAPLGKLIDIFFEKVLVNDKKPDVRANRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ I I V + K+V Sbjct: 721 LLKCIHIITQSVADFSKLV 739 >gi|163867855|ref|YP_001609059.1| glycyl-tRNA synthetase subunit beta [Bartonella tribocorum CIP 105476] gi|161017506|emb|CAK01064.1| glycyl-tRNA synthetase beta chain [Bartonella tribocorum CIP 105476] Length = 740 Score = 830 bits (2144), Expect = 0.0, Method: Composition-based stats. Identities = 336/739 (45%), Positives = 453/739 (61%), Gaps = 37/739 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPARMQ KAA +L + L G+ Y+ R+YWTP RL L ++GLS Sbjct: 1 MSDLLLELFSEEIPARMQRKAAANLKKTVTDQLVNAGLTYKAAREYWTPRRLTLDIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP + + AIDGFLR+TGL IS+ I D KKGD Y+A + K R Sbjct: 61 IRSKDVHEERKGPSTKSPQYAIDGFLRATGLNDISEAHIGHDDKKGDFYIAKIVKKGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E++L I+P I+ PWPKSMRW + A WIRPL++ILCI E + +I + Sbjct: 121 EEILADILPDIIRNFPWPKSMRWGKDSAKSGALKWIRPLQNILCIFGPEIGETHVIPFTI 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + P +V+ D Y+ LE V+LD E R+N IL DA L A Sbjct: 181 GSLESNNLTYGHRFLSDGKPFQVRRFDDYVTQLETHKVILDAERRKNIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV- 298 GLEL++D+ LLEE+ GLVEW + MG FDK +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELIQDEALLEEVAGLVEWPVILMGDFDKSFLDIPPEIIRLTIRANQKCFVTRKQGEKI 300 Query: 299 -LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ FILVSNI A+D G I +GNS+VV ARL DAL+FW++DQ +LP++ L+ S KF Sbjct: 301 KLSHHFILVSNILANDEGKEISKGNSKVVRARLSDALYFWQKDQRDLPDIQQLESSIKKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LD+ KPLDQRMARLD L+V FHAK+GTQ RV RI L +KIA LI AD L +RA +L Sbjct: 361 DLDIKKPLDQRMARLDHLNVTFHAKLGTQSARVERIATLAQKIAPLIQADPLLANRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG +G +YA+LQ E+ AIEEH KP+GP + +P ++IT+ Sbjct: 421 AKADLQTEIVGEFPELQGVMGHKYALLQGEDPRVAVAIEEHYKPQGPADRLPQEPLAITI 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL--- 534 LADK+D L+ FW INEKP+GSKDPYALRRA LGIIR+IL I L + Sbjct: 481 MLADKIDMLVGFWLINEKPTGSKDPYALRRAALGIIRLILSRDWKINLMPLFQLATNLFV 540 Query: 535 -------------------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + FFHDRLK+YL + R+D +EA+L + Sbjct: 541 QQKNKYEISQRENPQLQNLLPETTEVILSDLLFFFHDRLKIYLKEEGARYDALEAVLNKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D+ L + ++ L F ++ G F+ S KR IL E +K+ I+ EI+P+ + Sbjct: 601 SDDFLLVARHVESLIAFINTHDGMNFVASVKRTANILQNELQKSTTIANEINPELFFEKE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY I + + ++ +L + + I++FF++VLVN +VR NRL+ Sbjct: 661 EKQLYHAICEVEKKVLAPINITNLSFALGILAPLGKLIDLFFEKVLVNDKKPDVRANRLA 720 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ I V + K+ Sbjct: 721 LLKRTHTITQAVADFSKLA 739 >gi|298293954|ref|YP_003695893.1| glycyl-tRNA synthetase subunit beta [Starkeya novella DSM 506] gi|296930465|gb|ADH91274.1| glycyl-tRNA synthetase, beta subunit [Starkeya novella DSM 506] Length = 687 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 311/704 (44%), Positives = 443/704 (62%), Gaps = 22/704 (3%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ AAE+L ++ L E G++Y+ + + TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQAGAAENLRKLVTDALVERGLLYEGAKAFVTPRRLALAIHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 H P+ EER GPRVGA + AI GFL++ GL ++ + +I DPKKGD Y+A + + R Sbjct: 61 AHQPDTHEERKGPRVGAPEAAIQGFLKAAGLSSLDEAKIVSDPKKGDSYVAHIHRHGRPT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ IVP ++ PWPKSMRW + + W+RPL+SILC E + +++ ++ Sbjct: 121 PDVVAEIVPEIVRGFPWPKSMRWGKASAETGSLRWVRPLQSILCTFGPETEEPEVVRFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ T GHRF + I+V+ LD ++ LE A V+ D + R++ ILNDA LA A G Sbjct: 181 DGLESGDTTRGHRFLSEGAIRVRRLDDWMAKLEAAFVVADRDRRKDIILNDAKDLALAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 LELVED+ LL+EI GLVEW V MG+F++ +L +P+E+IR TI+ NQKCFV + G L Sbjct: 241 LELVEDEGLLDEIAGLVEWPVVLMGAFEEGFLDVPDEVIRATIRINQKCFVLKDPATGRL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FILVSN++ASDGG AIV GN RV+ ARL DA FW+ D+ + Sbjct: 301 ANRFILVSNLKASDGGKAIVAGNERVIRARLSDAKFFWETDKKTNAAV------------ 348 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 PL++R+A+ +V FH K+G+Q ER+ RI L K +A L+ AD L +RA + +K Sbjct: 349 ----PLEERLAKFG--NVTFHEKLGSQLERIQRIAALAKALAPLVGADPELAERAALYAK 402 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 +DL TE+V EFPE+QG +GK YA L+ A EEH KP+GP + VPT +S+ V+L Sbjct: 403 SDLRTEVVGEFPEVQGLMGKYYARLEGLPEEIALAAEEHYKPQGPTDRVPTAPVSVAVAL 462 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG++R++LEN + + L++F+E +L+ FF Sbjct: 463 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVVRLVLENGLRLKLTEFVEP-DLLAFFA 521 Query: 540 DRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK++L ++ RHDL++A+ P+ D+LL IV ++ L F SS G L KR Sbjct: 522 DRLKVHLREQGARHDLVDAVFALPDQDDLLLIVKRVEALGRFLSSEDGRNLLAGTKRAAN 581 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL IEEKK+ + E+ L I+D I+ ++ + + L+ + Sbjct: 582 ILRIEEKKDGIAYEGGVDTALFAEPEERALADAIADLRPQIEAALASEDFEGAMALIARL 641 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FFD+V VN +D+ +R NRL LL I+ + + +I Sbjct: 642 RAPVDAFFDKVTVNAEDKALRANRLRLLADIRTATRAIADFDRI 685 >gi|319407554|emb|CBI81204.1| glycyl-tRNA synthetase beta chain [Bartonella sp. 1-1C] Length = 742 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 340/738 (46%), Positives = 453/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA+MQ KAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPAQMQRKAASDLKKCVTDKLINAGLTYKAACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP V + ++ ID FLR+TGL IS I D KKG+ Y+A K RL Sbjct: 61 KSSPDVHEERKGPNVQSPQQVIDAFLRATGLNDISKVHIAHDDKKGNFYIAKTTKKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I PWPKSMRW + + WIR L++ILC+ + + KII + Sbjct: 121 EEIIADILPDIIYNFPWPKSMRWGQESAKNGSLRWIRSLQNILCVFGSAIGETKIIPFTV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+V+ D YI LE V+LD E R++ IL D L A Sbjct: 181 GSLKSNNLTYGHRFLSNGNPIQVRRFDDYISQLENHKVILDAERRKDIILADIQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVEDK LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+T+QKCFVTR R + Sbjct: 241 GLELVEDKALLEEVSGLVEWPVVLMGTFDKTFLSIPPEIIRLTIQTHQKCFVTRKRGEKS 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSNI ASD G I +GNS+VV ARL DAL+FW+ DQ NLPN L+ SA K Sbjct: 301 KLSNYFILVSNILASDKGIEISKGNSKVVHARLSDALYFWETDQCNLPNTMHLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A L L+V FHAK+GTQG R+ RI L + IA L+ AD L RA VL Sbjct: 361 DLDLNKPLDQRVAHLHYLNVTFHAKLGTQGARIERIAALTQTIAPLVQADSILAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEI+ EFPELQG IG++YA+LQ E+ +AIE+H +P GP + +P I++TV Sbjct: 421 AKADLQTEIIGEFPELQGVIGRKYALLQGEDPLVAEAIEDHYRPLGPKDRIPITPIAVTV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +LADK+DTLI FW INEKP+ SKDPYALRRA LG+I++IL N + I L Sbjct: 481 ALADKIDTLIGFWFINEKPTSSKDPYALRRAALGVIKLILSNDLKIRLIPLFHQAINFLL 540 Query: 533 -----------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +L+ F H+RLK YL D RHD+IEA+L + Sbjct: 541 QQRVKYAASETKGVNLQNISVEKKENIVLDLLAFLHERLKGYLKDEGARHDIIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D++L I ++ L F +S G+ L++ KR IL E KK I ++ P+ + Sbjct: 601 ADDILLITRRVETLTFFINSNDGDSLLIAIKRAINILENETKKGMIIINKVKPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + I + + + L + +PI FF++V VN D+ ++R NRL+ Sbjct: 661 EKQLYQATLETEKKIADHIHITELSSALNSLALLKKPINAFFEKVFVNDDNIDIRANRLA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL I+ + V + K+ Sbjct: 721 LLNRIRIVTQNVGDFSKL 738 >gi|90425820|ref|YP_534190.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisB18] gi|90107834|gb|ABD89871.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisB18] Length = 728 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 314/748 (41%), Positives = 420/748 (56%), Gaps = 69/748 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L EG++Y + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAAEDLRRMVTDKLVAEGLVYDGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG AI GFL++TGL ++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQSDLKEERKGPRVGGPDAAIQGFLKATGLASLDEAKIQRDPKKGDFYIALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ + ++ D+ Sbjct: 121 LDVLADILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIVATFGIDTEDPDVVAFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V+ + Y L +A V+LDP+ R++ IL+DA LA A Sbjct: 181 SGIKAGQVTRGHRFMAPGEISVRRFEDYDAKLFDAKVVLDPQRRKDIILHDARTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED LL+E+ GLVEW MGSFD +L +P E+IR TI+ NQKCFV G L Sbjct: 241 FELVEDPVLLDEVSGLVEWPVALMGSFDPAFLAIPGEVIRATIRNNQKCFVVSDPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N FIL +NI+ASDGG AIV GN RV+ ARL DA F++ D Sbjct: 301 TNKFILTANIEASDGGKAIVAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPKF--AQIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKARRAAQLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VP++ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPNDRVPSDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IR+ILEN I L E Sbjct: 459 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLILENNIRPNLISAFEGHSSAVDQT 518 Query: 533 -------------------------------------NLILFFHDRLKLYLHDRDIRHDL 555 +L+ FF DRLK+ L ++ RHDL Sbjct: 519 TMRIAQTKAKSSGGFSLVLNAHSTQSWNDRQTRTTSVDLLSFFADRLKVQLREQGARHDL 578 Query: 556 IEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLE 613 ++A+ D++L IV ++ L F ++ G+ L KR IL IEEKK+ R Sbjct: 579 VDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLAGVKRAANILRIEEKKDARAFDGA 638 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 + + EK L I ++ + + + + ++ FFD+V VN D Sbjct: 639 PDASLYVADEEKTLATAIDQVKLEASSAVAREDFAAAMSAMAKLRPAVDAFFDKVKVNDD 698 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 D VRDNRL LL I+ V + KI Sbjct: 699 DARVRDNRLKLLNEIRAATRAVADFSKI 726 >gi|27377647|ref|NP_769176.1| glycyl-tRNA synthetase subunit beta [Bradyrhizobium japonicum USDA 110] gi|81841876|sp|Q89S69|SYGB_BRAJA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|27350792|dbj|BAC47801.1| glycyl-tRNA synthetase beta chain [Bradyrhizobium japonicum USDA 110] Length = 699 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 312/720 (43%), Positives = 435/720 (60%), Gaps = 42/720 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ ER GP++GA A+ GFL++TGL+++ + +I++DP KGD Y+A++ KP R Sbjct: 61 ARQPDLKTERRGPKMGAPDAAVQGFLKATGLKSLDEAKIQRDP-KGDFYIALIEKPGRDA 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV I+ PWPKSMRW + +W+RPL +I E + ++ + Sbjct: 120 IDVLAEILPVIIRTFPWPKSMRWGARSGKPGSLNWVRPLHAITATFGLETEEPDVVKFAV 179 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP I V+ + Y L +A V+LDPE R++AIL DA +LA A G Sbjct: 180 DGIEAGQTTYGHRFLAPAAINVRRFEDYEAKLLDAKVVLDPERRKDAILTDAKQLAFAQG 239 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 +LVED++LL+E+ GLVEW V MGSF++++L P E+IR TI+ NQKCFV + G L Sbjct: 240 FDLVEDQNLLDEVAGLVEWPVVLMGSFEEEFLATPAEVIRATIRNNQKCFVVSDAKTGKL 299 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FILV+NI+A+DGG I+ GN RV+ ARL DA F++ D Sbjct: 300 ANKFILVANIEATDGGKTIIAGNERVIRARLSDAKFFYETD------------------- 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + +VFH ++GTQ R++RI L +IA L+ ADVA RA L+K Sbjct: 341 -LKTKLEDRLPKFE--QIVFHEELGTQAARITRIERLAAEIAPLVGADVAKTARAAHLAK 397 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +S+ V+L Sbjct: 398 ADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSVAVAL 457 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+I EN + + L + Sbjct: 458 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLIAENTLRLSLMKVAASALAGLSVK 517 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRLK+ L ++ RHDL++A+ D+LL IV + L +F Sbjct: 518 PADVQKLPGDLLTFFADRLKVQLREQGARHDLVDAVFALGGQDDLLMIVRRVDALGKFLE 577 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G+ L KR IL+IEEKK+ R L EK L IS+ S Sbjct: 578 SDDGKNLLAGTKRASNILSIEEKKDKRTFDGAPDAALYSLGEEKALAKAISEVQAEASAS 637 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + + P++ FFD+V VN DD +VR+NRL LL I++ V + KI Sbjct: 638 VAKEDFAAAMSAMAKLRPPVDAFFDKVRVNDDDPKVRENRLKLLNEIRSATRAVADFSKI 697 >gi|254465195|ref|ZP_05078606.1| glycyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium Y4I] gi|206686103|gb|EDZ46585.1| glycyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium Y4I] Length = 699 Score = 822 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 282/722 (39%), Positives = 409/722 (56%), Gaps = 46/722 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L + GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRVTDGLVEAGLTYAGAAALSTPRRLTLAVDGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL + ++ KG VY A++ KP R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGLTRDQLEE--RETPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW A W+RPL SILCIL +++ ++DLD+ Sbjct: 119 AEIIAEVLEDTIRNFPWPKSMRWGAG-----ALRWVRPLHSILCIL-SDENGTSVVDLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V D Y L+ A V+LD R AI +A A A G Sbjct: 173 DGIKSGNTTRGHRFMAPEKITVTGFDDYAAKLKRAFVVLDARERAEAIWQEATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L++VEDK LL E+ GLVEW V MGS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LDVVEDKGLLAEVAGLVEWPVVLMGSIDAEFLELPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + + + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRTAKSEAGMGVWVE----- 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++ +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 348 ------------NLSNVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + +A E+H P GP ++VP+ +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPQAVANACEQHYSPLGPGDDVPSEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL---- 536 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++LEN + +PL+ I Sbjct: 456 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLENDVRMPLNMVFGKAAEITGKRE 515 Query: 537 ---------------FFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEF 580 FFHDRLK++L D+ IRHD+I+A + +D+L +V + L +F Sbjct: 516 GASGEAFADVNDLRGFFHDRLKVFLRDQGIRHDVIDACIAMDGSDDLTLLVKRARALEDF 575 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + GE L KR IL+ E+K+ E S ++ E EK L+ + G I Sbjct: 576 LKTEDGENLLQGFKRANNILSQAEEKDGVEYSYGADRKFAEDETEKALFDALEAGGAAIS 635 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ + + + ++ P++ FF+ V VN ++ +R NRL+LL I+ + V ++ Sbjct: 636 PAIEAEDFAAAMRGMAALRAPVDAFFEAVQVNAENEVLRRNRLNLLSQIRQVCGQVADLT 695 Query: 700 KI 701 K+ Sbjct: 696 KV 697 >gi|319404561|emb|CBI78167.1| glycyl-tRNA synthetase beta chain [Bartonella rochalimae ATCC BAA-1498] Length = 742 Score = 820 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 343/738 (46%), Positives = 454/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA+MQHKAA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPAQMQHKAASDLKKCVTDKLINAGLTYKAACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP V + ++ ID FLR+TGL IS I D KKG+ Y+A K RL Sbjct: 61 KSSPDVHEERKGPNVQSPQQVIDAFLRATGLNDISKVHIAHDDKKGNFYIAKTTKKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I PWPKSMRW + + WIR L++ILC+L + + KII + Sbjct: 121 EEIIADILPDIIYNFPWPKSMRWGQESAKNGSLRWIRSLQNILCVLGSAIGETKIIPFTV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+V+ D Y+ LE V+LD E R++ IL D L A Sbjct: 181 GSLKSNNLTYGHRFLSNGKPIQVRRFDDYVSQLENHKVILDAERRKDIILADIQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVEDK LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+T+QKCFVTR R + Sbjct: 241 GLELVEDKALLEEVSGLVEWPVVLMGTFDKTFLSIPPEIIRLTIQTHQKCFVTRKRGEKS 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILV+NI ASD G I +GNS+VV ARL DAL+FW+ DQ NLPN L+ SA K Sbjct: 301 KLSNYFILVANILASDKGIEISKGNSKVVHARLSDALYFWETDQCNLPNTIHLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A LD L+V FHAK+GTQG R+ RI L + IA L+ AD L RA VL Sbjct: 361 DLDLNKPLDQRVAHLDYLNVTFHAKLGTQGARIERIAALTQIIAPLVQADSILAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEI+ EFPELQG IG++YA+LQ EN +AIE+H KP GP + +PT I++TV Sbjct: 421 AKADLQTEIIGEFPELQGLIGRKYALLQGENPLVAEAIEDHYKPLGPKDRIPTESIAVTV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL--- 534 +LADK+DTLI FW INEK + SKDPYALRRA LG+I+++L N + I L Sbjct: 481 ALADKIDTLIGFWFINEKATSSKDPYALRRAALGVIKLMLSNDLKIRLIPLFYQAMNFLL 540 Query: 535 -------------------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + FFH+RLK YL D RHD+IEA+L + Sbjct: 541 QQRVKYATSETESAHLQNMPVEKKENIVLDLLAFFHERLKGYLKDEGARHDIIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 D++L I ++ L F +S G+ L++ KR IL E KK I +I P+ + Sbjct: 601 ADDILLITRRVEALTFFINSNDGDSLLIAIKRAINILENETKKGTIIINKIKPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + + I + + L + +PI FF++V VN D+ +R NRL+ Sbjct: 661 EKQLYQAMLETEKKIANHIHITELSSALNSLALLKKPINAFFEKVFVNDDNINIRANRLA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL I+ + V + K+ Sbjct: 721 LLDRIRIVTQNVGDFSKL 738 >gi|75676770|ref|YP_319191.1| glycyl-tRNA synthetase subunit beta [Nitrobacter winogradskyi Nb-255] gi|74421640|gb|ABA05839.1| glycyl-tRNA synthetase beta chain [Nitrobacter winogradskyi Nb-255] Length = 727 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 305/747 (40%), Positives = 432/747 (57%), Gaps = 68/747 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFVTPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++ GL ++ + +I++DPKKGD Y+A++ +P R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKAAGLTSLDEAKIQRDPKKGDFYVALIERPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL ++PV ++ PWPK MRW + A +W+RPL SI+ E + +++ D+ Sbjct: 121 IDVLAELLPVIVRTFPWPKQMRWGERSAKPGALTWVRPLHSIIATFGMETEEPEVVPFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 +I G T GHRF AP V+ + Y L +A V+LDP+ R++ IL DA LA A G Sbjct: 181 ADITAGQATRGHRFMAPGEFSVRRFEDYEAKLHDAKVVLDPQRRKDIILADAKELAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED+ LL+E+ GLVEW V MGSFDK++L +P E+IR TI+ NQKCFV + G L Sbjct: 241 YELVEDQALLDEVSGLVEWPVVLMGSFDKEFLSIPGEVIRATIRNNQKCFVVNDPKSGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+LV+N++ASDGG AI+ GN RV+ ARL DA F++ D Sbjct: 301 ANRFLLVANLEASDGGEAIIAGNERVIRARLADAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEARLPKFE--QIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKAKRAARLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VP++ +SI V+L Sbjct: 399 TDLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPNDRVPSDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IR+++ N + + L + Sbjct: 459 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLVVNNGLQLKLRHITAEALNLLEEQ 518 Query: 533 ------------------------------------NLILFFHDRLKLYLHDRDIRHDLI 556 +L++FF DRLK+ L ++ RHDL+ Sbjct: 519 KPDLVGEARQRWLNQYGGSHSIEAALESAVAAVFVKDLLIFFADRLKVQLREQGARHDLV 578 Query: 557 EAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEI 614 +A+ D+LL IV ++ L +F + G+ L KR ILAIEEKK+ R Sbjct: 579 DAVFALEGQDDLLMIVRRVEALGKFLDTDDGKNLLSGTKRASNILAIEEKKDKRSFDGAP 638 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 L EK L A I ++ + + + + ++ FF+QV VN D Sbjct: 639 DASLYTLGEEKALGAAIDQVKREASAAVATEDFAAAMSAMAKLRPAVDAFFEQVKVNDAD 698 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKI 701 ++R+NRL LL I+ V + KI Sbjct: 699 PKIRENRLRLLNEIRAATRTVADFSKI 725 >gi|153007867|ref|YP_001369082.1| glycyl-tRNA synthetase subunit beta [Ochrobactrum anthropi ATCC 49188] gi|151559755|gb|ABS13253.1| glycyl-tRNA synthetase, beta subunit [Ochrobactrum anthropi ATCC 49188] Length = 764 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 346/763 (45%), Positives = 457/763 (59%), Gaps = 61/763 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA DL ++ L E G+ Y+ YWTP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAGDLKKMITDGLVEAGLTYEAATPYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + E+ GP V A ++AI GFLR GL ++ + DPKKGD Y+A L KP R Sbjct: 61 VRSKDVHEDIKGPSVTAPEQAIQGFLRKAGLTDVAQAHVHSDPKKGDFYVAHLTKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ +VP I+ PWPKSMRW + + W+RPL+SILC E + +ID D+ Sbjct: 121 EEIVAELVPQTIRNFPWPKSMRWGAASARPGSLRWVRPLQSILCTFGPETEETVVIDFDV 180 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I GN+TYGHRF + PIKV+ + Y+ LE+A V+LD E R+ I DAH LA A Sbjct: 181 DGIKSGNVTYGHRFLSDGQPIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFAS 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVED LLEE+ GLVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 GLELVEDDGLLEEVSGLVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGEAE 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILVSNI A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF Sbjct: 301 ALSNKFILVSNIAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLVASAEKF 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 LDL KPLDQRMARLD L+V FHAK+GTQG RV RIR L +IA L+ AD L RA VL Sbjct: 361 GLDLKKPLDQRMARLDALNVTFHAKLGTQGARVERIRELAAQIAPLVGADPKLAARAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G++YA+LQ E+ + AIEEH KP+GP + VP N +S+ V Sbjct: 421 AKADLTTEVVGEFPELQGAMGRKYALLQGEDEAVAAAIEEHYKPQGPSDVVPKNPVSVAV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-------- 529 +LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IR++L + PL Sbjct: 481 ALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALK 540 Query: 530 --EDQNLILFFHDRLK----------------------------------------LYLH 547 + Q + F +L +LH Sbjct: 541 EGQVQRKLREFETKLAGENSGDIDGEQDVDNALASYEKQVRAEAEASSEPVLADLLSFLH 600 Query: 548 DR--------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 DR R+D I+A+L PE DNLL + ++ L F + G+ L KR I Sbjct: 601 DRFKVHLKEEGARYDAIDAVLSPEADNLLLVARRLEALIVFINEEDGKNLLAGTKRAANI 660 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 LA EEKK +++ +S L EK L+ ++ + ++ + ++ L + Sbjct: 661 LAAEEKKGTKVADSVSASLLHEAEEKALFEAVTLASQDAEAAIAREDFNGAMLALAKLRG 720 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 P++ FF++VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 PVDTFFEKVLVNDEDENVRANRLALLDQIRAATGKVADFSKIA 763 >gi|220924241|ref|YP_002499543.1| glycyl-tRNA synthetase subunit beta [Methylobacterium nodulans ORS 2060] gi|254781857|sp|B8IBI6|SYGB_METNO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219948848|gb|ACL59240.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium nodulans ORS 2060] Length = 701 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 321/721 (44%), Positives = 427/721 (59%), Gaps = 42/721 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLRKLVTDALVERGFLYEGAKAFATPRRLALHIAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVGA + AI GFL+S GL +++D + DPKKG+ Y+AV+ +P R Sbjct: 61 TRGKDVREERKGPRVGAPEAAIQGFLKSAGLTSLADATVVADPKKGEFYVAVIERPGRDT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL SI+ E + + + Sbjct: 121 IDVLAEILPAVIRNFPWPKSMRWGAASTEPGSLRWVRPLHSIVASFGPETETPERVPFAI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP PI+V+ Y+ LE A V+LD + RR+ IL+DA LA A G Sbjct: 181 DGIEAGFTTYGHRFLAPGPIEVRRFADYLPALERARVVLDADRRRDIILHDARDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR----TRE 296 L+LVED+ LLEE+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV R Sbjct: 241 LDLVEDEGLLEEVAGLVEWPVTLMGSFDESFLDIPPEVIRATIRANQKCFVLRAPSQDGR 300 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 LAN FILVSN+ ASDGGAAIV GN RVV ARL DA FW+ D+ Sbjct: 301 ERLANAFILVSNLAASDGGAAIVAGNERVVRARLSDAKFFWETDKKV------------- 347 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 PL+ R+ +L D+VFH K+GTQG RV RI L + +A L+ AD L RA Sbjct: 348 -------PLESRLPKLK--DIVFHEKLGTQGARVERIAALARNLAPLVGADAGLAGRAAR 398 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TE+V EFPELQG +G+ YA LQ E + AIEEH KP GP + VPT +S+ Sbjct: 399 LAKADLVTEMVGEFPELQGLMGRYYAELQGEPAAIATAIEEHYKPLGPSDRVPTEPVSVA 458 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----- 531 V+LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IR++L + +PL Sbjct: 459 VALADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRLVLAGDVRLPLLGAFAQAVAGH 518 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 +L+ FF DRLK++L D+ RHDLI+A+ P D+LL IV ++ L F Sbjct: 519 AAVGPESFAADLLGFFADRLKVHLRDQGARHDLIDAVFAIPGQDDLLMIVRRVEALGRFL 578 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G L +R IL IEEK++ R P L E L + E Sbjct: 579 DTEDGRNLLAGFRRAANILRIEEKRDGRAYDAAPDPALFSLPEESALANALDAARARAAE 638 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + L ++ P++ FFD+V VN +D +R NRL+LL ++ V + + Sbjct: 639 AVAAEDFEGAMRALATLRPPVDAFFDKVTVNAEDAALRANRLALLNALREATRAVADFAR 698 Query: 701 I 701 I Sbjct: 699 I 699 >gi|254504740|ref|ZP_05116891.1| glycyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] gi|222440811|gb|EEE47490.1| glycyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] Length = 695 Score = 817 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 306/721 (42%), Positives = 422/721 (58%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L + G+ Y+ + + TP RL L++ G+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAEDLKTLVTNALVDAGLPYEGAKAFATPRRLALHVAGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA++GFLR GL +I D I+ DPKKGD Y+AV+ KP R Sbjct: 61 AGSAATREERKGPRVGAPEKAVEGFLRGAGLASIDDATIQTDPKKGDFYVAVIEKPGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ +P ++ PWPKSM+W TT + W+RPL SI+ E + ++ + Sbjct: 121 IDIIAEFMPGILRNFPWPKSMKWGTTST-----RWVRPLHSIIATFGPETEEPDVVPFEF 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF A V+ D Y LE+ V+LD + R++ IL DA A A+G Sbjct: 176 DGIKSGKTTRGHRFLADVAFDVRRFDDYAPALEKHKVVLDADRRKDIILADAKDRALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 LELVED LLEE+ GLVEW V GSFD+ +L +P+E I+LTIK NQKCFV + + G L Sbjct: 236 LELVEDPGLLEEVAGLVEWPVVLTGSFDEAFLEIPDECIQLTIKVNQKCFVLKDPKTGKL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L+SNI A D G I+ GN +V+ ARL DA FW D Sbjct: 296 ANKFVLISNIVAPDDGKLIIAGNEKVIRARLSDAQFFWTSD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L + +L+ DV FH K+G+ GERV R+ L ++A L+ AD A R L+K Sbjct: 337 -LKTNLTDNLPKLN--DVKFHEKLGSVGERVQRLIALSAELAPLVGADEAKAKRGAELAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ S AIEEH KP+GP ++VP + ++I V+L Sbjct: 394 ADLVSAMVFEFPELQGLMGRYYATAQGEDASVATAIEEHYKPQGPSDSVPADPVAIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 A+KLD L FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + + L + I Sbjct: 454 AEKLDLLTGFWAIDEKPTGSKDPYALRRAALGVIRIVLENNLRLKLGELILSALKAQSAI 513 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRLK++L D +RHDLI+A+ D+LL +V ++ L +F S Sbjct: 514 ADDEAALVADLLSFFADRLKVHLKDEGMRHDLIDAVFALDGQDDLLMVVKRVEALQKFVS 573 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G KR IL EEKK+ ++ + +L +AE L I E+ Sbjct: 574 SDDGTNLAAGYKRAVNILKAEEKKDGTPVTGKPHADHLSEQAEIDLAVAIDTARAEAAEA 633 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + L + P++ FF+ +LVN DD +R NRL LL I++ +V + K+ Sbjct: 634 VKSENFEGAMEALSKLRAPVDRFFEDILVNADDPALRMNRLQLLAEIRDATHVVADFSKV 693 Query: 702 V 702 Sbjct: 694 A 694 >gi|328544957|ref|YP_004305066.1| glycyl-tRNA synthetase beta subunit [polymorphum gilvum SL003B-26A1] gi|326414699|gb|ADZ71762.1| Glycyl-tRNA synthetase beta subunit [Polymorphum gilvum SL003B-26A1] Length = 695 Score = 815 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 309/721 (42%), Positives = 432/721 (59%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ L E G+ Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLKSLVTNALVEAGLTYEGAKAFSTPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA KA++GFLR GL +I + I+ DPKKGD Y+AV+ +P R Sbjct: 61 VASSATREERKGPRVGAPDKALEGFLRGAGLSSIDEATIQTDPKKGDFYVAVIERPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ +P ++ PWPKSMRW W+RPL+SIL E + +I+ ++ Sbjct: 121 IDIIAEAMPGIVRAFPWPKSMRWGAGQ-----LRWVRPLQSILATFGPETEEPEIVRFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF A I+V+ D Y+ LE+ V+LD + R++ IL+DA A A+G Sbjct: 176 DGIVSGDTTRGHRFLADAEIRVRRFDDYMPKLEKHKVVLDADRRKDMILHDARDRALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 LELVED+ LLEE+ GLVEW V GSF++ +L +P+E IRLTI+ NQKCFV R + G L Sbjct: 236 LELVEDEGLLEEVAGLVEWPVVLTGSFEEAFLAIPDECIRLTIRANQKCFVLRDPKTGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L SNI +DGG +V GN +V+ ARL DA FW+ D Sbjct: 296 ANRFVLTSNIVPADGGKVVVAGNEKVIRARLSDARFFWETD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L + +LD +VFH K+G+QGERV R+ L ++A L+ AD R L+K Sbjct: 337 -LKTKLADTLPKLD--GIVFHDKLGSQGERVKRLEALAVELAPLVGADTDKARRGAELAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ S AIE+H KP+GP + VPT+ ++I V+L Sbjct: 394 ADLVSAMVYEFPELQGLMGRYYATAQGEDASVATAIEDHYKPQGPSDRVPTDPVAIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 +DKLD L FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + +PL++ I Sbjct: 454 SDKLDLLAGFWAIDEKPTGSKDPYALRRAALGVIRIVLENGLRLPLARLIGAAQSNLGIG 513 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 ++L+ FF DRLK++L D RHDLI+A+ D+LL IV ++ L F S Sbjct: 514 LSDPDALVEDLLAFFADRLKVHLKDEGARHDLIDAVFALGGQDDLLMIVRRVEALGTFLS 573 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + G L +R IL IEEKK+ + +L+ AE +L A I + E+ Sbjct: 574 TDDGANLLAGYRRAVNILRIEEKKDGAPVEGRPHADHLVEPAEIQLAAAIDAARAEVGEA 633 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + P++ FF+++LVN +D VR NRL LL I+++ V + ++ Sbjct: 634 LAGEDFEAAMTALAHLRAPVDRFFEEILVNAEDAGVRANRLRLLAEIRDVAGTVADFSRV 693 Query: 702 V 702 Sbjct: 694 A 694 >gi|319899206|ref|YP_004159299.1| glycyl-tRNA synthetase beta chain [Bartonella clarridgeiae 73] gi|319403170|emb|CBI76729.1| glycyl-tRNA synthetase beta chain [Bartonella clarridgeiae 73] Length = 742 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 334/738 (45%), Positives = 449/738 (60%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA MQ +AA DL + L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPAHMQRRAASDLKKCVTDKLVNAGLSYKAACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP + ++ ID FLR+TGL IS I D KKGD Y+A K RL Sbjct: 61 KSSPDVHEERKGPNAQSPQQVIDAFLRTTGLNDISKVHITHDDKKGDFYIAKTTKKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PW KSMRW + A WIR L++ILC+ + + II + Sbjct: 121 EEIIADILPDIIRNFPWQKSMRWGQESAKSGALRWIRSLQNILCVFGSAIGETHIIPFTV 180 Query: 181 KEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + I+V+ D Y+ LE V+LD E R++ IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSNGKSIQVRRFDDYVTQLENHKVILDAERRKDIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR--EG 297 GLELVEDK LLEE+ GLVEW V M +FDK +L +P E+IRLTI+T+QKCFVTR R + Sbjct: 241 GLELVEDKALLEEVAGLVEWPVVLMSTFDKTFLNIPPEIIRLTIQTHQKCFVTRKRGDKS 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILV+NI A+D G I +GNS+VV ARL DAL+FW+ DQ NLPN++ L+ SA K Sbjct: 301 KLSNYFILVANILANDKGIEISKGNSKVVNARLSDALYFWQTDQCNLPNITHLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A+L+ L+V FHAK+GTQG +V RI L + IA L+ AD L RA +L Sbjct: 361 DLDLNKPLDQRIAQLNYLNVTFHAKLGTQGAKVERIAALTQIIAPLVKADSILAKRAAIL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TEIV EFPELQG IG++YA+LQ E+ +AIE+H KP GP + +P I+ITV Sbjct: 421 AKADLQTEIVGEFPELQGLIGRKYALLQGEDPRVAEAIEDHYKPLGPKDRIPCEPIAITV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL--- 534 +LADK+DTLI FW INEKP+ SKDPYALRRA LG+IR++L N I L Sbjct: 481 ALADKIDTLIGFWFINEKPTSSKDPYALRRAALGVIRLMLLNDWKISLMPLFHQAMNFLL 540 Query: 535 -------------------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + FFH+RLK YL D RHD+IEA+L + Sbjct: 541 QQKIQYATSETEATQLQNISVEKTENIVLDLLTFFHERLKGYLKDEGARHDIIEAVLTKD 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D++L I ++ L F ++ G L++ KR IL E KK I ++ P+ + Sbjct: 601 SDDILLIARRVEALTFFINTNDGNSLLIAVKRAINILENETKKGTTIINKVRPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + I + + L + +PI FF++V VN + +R NRL+ Sbjct: 661 EKQLYQTTIETEKKIADHIHVTELSSTLSSLLLLKKPINEFFEKVFVNDGNINIRTNRLA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL+ I+ + V + K+ Sbjct: 721 LLERIRIVTQNVADFSKL 738 >gi|259416308|ref|ZP_05740228.1| glycyl-tRNA synthetase, beta subunit [Silicibacter sp. TrichCH4B] gi|259347747|gb|EEW59524.1| glycyl-tRNA synthetase, beta subunit [Silicibacter sp. TrichCH4B] Length = 687 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 283/710 (39%), Positives = 414/710 (58%), Gaps = 34/710 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +A EDL + L E G+ Y TP RL L ++GL Sbjct: 1 MADLLIELFSEEIPARMQARAGEDLKKRMTDGLVEAGLTYAGAHALTTPRRLTLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA +KAI+GFLR GL + +D KG VY A++ KP R Sbjct: 61 DHSPTVREERKGPKVGAPEKAIEGFLRGAGLSRDQLEE--RDTPKGAVYFAIIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILC+L ED +++ LD+ Sbjct: 119 AEIIAEVLEDTIRNFPWPKSMRWGAG-----SLRWVRPLHSILCVLTRED-GSEVVSLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T+GHRF AP I V S + Y L+ A V+LDP+ R AI DA A A G Sbjct: 173 DGITSGDATWGHRFMAPARISVTSFEDYAAKLKRAFVVLDPKEREAAIWQDATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V+DK LL E+ GLVEW V MGS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LEVVDDKGLLAEVAGLVEWPVVLMGSIDAEFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + ++ Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRIAKSEVGMEGWLESLG-- 350 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 351 ---------------NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAAKVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A ++H P GP + VPT +S+ V++A Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAQAAGLPQEVANACQQHYSPLGPSDEVPTEPVSVAVAMA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------QFIEDQN 533 DK+DTL FWAI+EKP+GSKDPYALRRA LG+IR++LEN + + LS + ++ + Sbjct: 456 DKIDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLENGVRVALSGVFTQGYEGADESD 515 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK++L D+ IRHD+I+A + ND+L +V + L F SS GE L Sbjct: 516 LLSFFHDRLKVFLRDQGIRHDVIDACIAMEGNDDLTLLVKRARALEAFMSSEDGENLLQG 575 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL+ E+K+ E S +++ AE L+ ++ I +++ + + Sbjct: 576 FKRANNILSQAEEKDGVEYSYGADKKFIEDAAEAALFDALAANEGAISSAIEAEDFAAAM 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ P++ FF+ V VN D++ VR NRL+LL I+ + V ++ +I Sbjct: 636 GGMAALRAPVDAFFEAVQVNSDNQVVRRNRLNLLSQIRKVCGQVADLSRI 685 >gi|148253849|ref|YP_001238434.1| glycyl-tRNA synthetase subunit beta [Bradyrhizobium sp. BTAi1] gi|229470695|sp|A5EED4|SYGB_BRASB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146406022|gb|ABQ34528.1| glycyl-tRNA synthetase beta chain [Bradyrhizobium sp. BTAi1] Length = 701 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 312/721 (43%), Positives = 431/721 (59%), Gaps = 42/721 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAAEDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG AI GFL++TGL ++ + I++DPKKGD Y+A++ KP R Sbjct: 61 ARQADLKEERKGPRVGGPDAAIQGFLKATGLSSLEEATIQRDPKKGDFYVALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL ++PV ++ PWPKSMRW A +W+RPL +I E + ++ + Sbjct: 121 LDVLAEMLPVIVRTFPWPKSMRWGKRSEKPGALNWVRPLHAITATFGLETEEPDVVSFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP I V+ + Y L +A V+LDP+ R++ I+ DA +LA A G Sbjct: 181 DGIEAGQTTYGHRFMAPAAISVRRFEDYEAKLLDAKVVLDPQRRKDTIVTDAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED LL+E+ GLVEW V MGSFD +YL +P E+IR TI+ NQKCFV R + G L Sbjct: 241 YELVEDPVLLDEVSGLVEWPVVLMGSFDPEYLKVPAEVIRATIRNNQKCFVVRDPKTGGL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FIL +NI+A+DGG I+ GN RV+ ARL DA F++ D Sbjct: 301 APKFILTANIEATDGGKTIIAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + +VFH K+GTQ R++RI L +IA L+ AD A RA L+K Sbjct: 342 -LKTRLEDRLPKFE--QIVFHEKLGTQAARIARIEKLAAEIAPLVGADAAKTARAAKLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E++S A EEH KP+GP + VPT+ +S+ V+L Sbjct: 399 ADLLTEVVGEFPEVQGLMGKYYALAQGEDVSVAAACEEHYKPQGPGDRVPTDPVSVAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+I EN + + L Q Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLITENSLRLSLLQVAGSALAGLHVK 518 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFF 581 +L+ FF DRLK+ L ++ RHDL++A+ D+LL +V ++ L +F Sbjct: 519 SELDAGKLSADLLSFFADRLKVQLREQGARHDLVDAVFALGGQDDLLMVVRRVEALGKFL 578 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G+ L KR ILAIEEKK+ R+ L+ EK L I + G+ Sbjct: 579 ETDDGKNLLAGTKRASNILAIEEKKDKRKFDGAPDAALYRLDEEKALAKAIGEVGSEAGT 638 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + + + ++ FFD+V VN DD +R+NRL LL I+N V + K Sbjct: 639 AVAKEDFAAAMHAMAKLRPAVDAFFDKVKVNDDDAAIRENRLKLLNEIRNATRAVADFSK 698 Query: 701 I 701 I Sbjct: 699 I 699 >gi|115526402|ref|YP_783313.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisA53] gi|115520349|gb|ABJ08333.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisA53] Length = 744 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 314/764 (41%), Positives = 425/764 (55%), Gaps = 85/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L EG++Y+ + + TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQAKAAEDLKRLVTDRLVAEGLVYEGAKAFATPRRLALTIHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++S+ +I+ DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLSEAKIQSDPKKGDFYIALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ E ++ D+ Sbjct: 121 LDVLAEILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIIATFGLETEDPDVVAFDI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ Y L +A V+LDP+ R++ IL DA LA A Sbjct: 181 SGIKAGQVTRGHRFMAPQDFSVRRFADYEAKLYDAKVVLDPQRRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED LL+E+ GLVEW MGSFDK++L +P E+IR TI+ NQKCFV R G L Sbjct: 241 YELVEDPVLLDEVSGLVEWPVALMGSFDKEFLSIPGEVIRATIRNNQKCFVVRDPATGNL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FIL +NI+ASDGGAAI GN RV+ ARL DA F++ D Sbjct: 301 APKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTSLESRLPKFD--QIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKTKRAARLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VP++ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPTDRVPSDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID----------------- 522 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IR+ILEN I Sbjct: 459 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLILENGIRTTLSKCMMFGHKQVSTK 518 Query: 523 ----------------------------IPLSQFIEDQNLILFFHDR-------LKLYLH 547 + + D ++ LF H++ L ++ Sbjct: 519 LFRFSSANFRAHIATILGVLSPDATERVLAAREIDFDTSVALFHHEKGSADTEQLLSFVV 578 Query: 548 DR--------DIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DR RHDL++A+ D+LL +V ++ L F ++ G+ L KR Sbjct: 579 DRLKVQLRDQGARHDLVDAVFALGGQDDLLMVVRRVEALAAFLATDDGKNLLAGVKRAAN 638 Query: 599 ILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL IEEKK+ R + EK L A I ++ + + + + Sbjct: 639 ILRIEEKKDSRAFDGAPDAALYASDEEKALAAAIDQAKVEASSAVAKEDFSAAMSAMAKL 698 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ FF++V VN DD+ VR+NRL LL I+ V + KI Sbjct: 699 RPAVDAFFEKVKVNDDDKAVRENRLKLLNEIRAATRAVADFSKI 742 >gi|254491151|ref|ZP_05104332.1| glycyl-tRNA synthetase, beta subunit [Methylophaga thiooxidans DMS010] gi|224463664|gb|EEF79932.1| glycyl-tRNA synthetase, beta subunit [Methylophaga thiooxydans DMS010] Length = 692 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 228/722 (31%), Positives = 354/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + ++ + K+ + +R Y TP RL L + L Sbjct: 6 DLLIELGTEELPPKALATLSKAFHQGVEQGFKKAELQCDEIRPYATPRRLALVITKLQTR 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ ER GP V G KA+ GF +S G+ +K D KG + ++ Sbjct: 66 QQDRTIERRGPAVTSAFDEDGNPTKALMGFAKSCGVDVDDLETMKTD--KGAWLVFKQQQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L I+ A+ ++P PK MRW ++RP+ ++ + + + Sbjct: 124 EGADTASLLPDIIQQALNELPIPKRMRWGDLPG-----EFVRPVHWLVVLF-----GDDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 + +DL + G ++ GHRFH P PI++ S Y LE E VL+D + R+ I + Sbjct: 174 VPVDLLGVSAGRMSRGHRFHNPQPIEIGSAMTYAPQLESEGHVLVDYDARKQIINTQVNE 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA +G E V + DLLEE+ GLVEW G+FD+++L LP E + +++ +QK F R Sbjct: 234 LAEKLGGEAVINPDLLEEVTGLVEWPVALAGNFDERFLELPAEALISSMEGHQKYFAVRA 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L FI VSNI + D A +V GN RV+ RL DA FW D+ Sbjct: 294 KNSDLLPHFITVSNIASQDP-AQVVAGNERVILPRLSDAAFFWDTDRK------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R +L +VF K+GT ++ R+ L +IAQ I D AL +RA Sbjct: 341 --------QPLAARQEQLK--SIVFQNKLGTVYDKSQRVAKLAAEIAQHIRGDEALAERA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL TE+V EFP+LQG +G+ YA L EN +A++E PR + +P Sbjct: 391 AMLAKCDLVTEMVGEFPDLQGIMGRYYARLDGENNDVAEALDEQYLPRFAGDQLPVTPTG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 VSLA+KLDTL + I + P+G KDP+ALRRA LG++RII+EN++D+ L+ ++ Sbjct: 451 QAVSLAEKLDTLTGLFGIGQPPTGVKDPFALRRAALGVLRIIIENELDLDLASLVDFAAD 510 Query: 535 ---------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +F+DRL+ Y D+ + D EA+L + L + +K + Sbjct: 511 TCGDTLTEKSVTSQVMQYFYDRLRGYALDQGFKADEFEAVLAVKPSRPLDFMQRLKAVAA 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KRI IL E + + I L AEK L ++ + Sbjct: 571 FRQLEQADSLAAGNKRIGNILRKNEAEAE--GMTIDDALLQESAEKDLAEKLAQASQDLA 628 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + + L + E I+ FFDQV+V DD VR NRL++L + + L V ++ Sbjct: 629 PLSAKSDYAGVLNYLAGMRETIDAFFDQVMVMADDEAVRQNRLAILNQTRALFLGVADIS 688 Query: 700 KI 701 + Sbjct: 689 CL 690 >gi|152972429|ref|YP_001337575.1| glycyl-tRNA synthetase subunit beta [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897022|ref|YP_002921768.1| glycyl-tRNA synthetase subunit beta [Klebsiella pneumoniae NTUH-K2044] gi|262040630|ref|ZP_06013868.1| glycyl-tRNA synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|166227916|sp|A6TFH4|SYGB_KLEP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|150957278|gb|ABR79308.1| glycyl-tRNA synthetase beta subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549350|dbj|BAH65701.1| glycyl-tRNA synthetase beta subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041994|gb|EEW43027.1| glycyl-tRNA synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 689 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 209/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAQEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +D+ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLDLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ + L AE +L + Sbjct: 566 AVSHFRTLEESSALAAANKRVSNILA---KSDETLNDIVHASVLKEAAEIKLAGNLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|283835937|ref|ZP_06355678.1| glycyl-tRNA synthetase, beta subunit [Citrobacter youngae ATCC 29220] gi|291068114|gb|EFE06223.1| glycyl-tRNA synthetase, beta subunit [Citrobacter youngae ATCC 29220] Length = 689 Score = 807 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + TP RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGIAHGNVEWFATPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAQAQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAETLLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + S D Y L E V+ D R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDSADQYPEILRERGKVIADYAERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F+ K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEDKFLAVPSEALVHTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFYTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L+ I Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLNLTTLIL 505 Query: 531 DQNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F +R + + D D+I ++L + +K Sbjct: 506 KASRLYGDKLTNDNVLDDVETFMLNRFRAWYQDMGYSIDVILSVLELRPTEPVDFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F S + KR+ IL+ K+ ++ E+ P L E+ L ++ Sbjct: 566 AVTHFRSLPDAASLAAANKRVSNILS---KRVDVLNDEVHPALLTEPTEQVLAFKMAVVR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 I+ H Y + L S+ +P++ FF+ V+VN ++++VR NRL+LL ++ + L V Sbjct: 623 DRIKPLCQHFLYQEALTELASLRQPVDDFFENVMVNAENQDVRINRLTLLSKLRALFLEV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|331685221|ref|ZP_08385807.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H299] gi|331077592|gb|EGI48804.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H299] Length = 689 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNTNVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAASLAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|319406070|emb|CBI79700.1| glycyl-tRNA synthetase beta chain [Bartonella sp. AR 15-3] Length = 742 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 336/738 (45%), Positives = 451/738 (61%), Gaps = 37/738 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPA MQ +AA DL +I L G+ Y+ +YWTP RL L ++GLS Sbjct: 1 MPDLLLELFSEEIPASMQRRAASDLKKCVINKLVNAGLTYKVACEYWTPRRLTLNIRGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP V + ++ ID FLR+TGL IS I D KKGD Y+A + RL Sbjct: 61 KSSPNVHEERKGPNVQSPQQIIDAFLRTTGLNDISKLHIAHDDKKGDFYIAKTTQKGRLA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ I+P I+ PW KSMRW + A WIR L++ILC+ + + +I + Sbjct: 121 EEIIADILPDIIRNFPWKKSMRWGKESAKSGALKWIRSLQNILCVFGSAMDETHVIPFTV 180 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N+TYGHRF + PI+++ D Y+ LE V+LD E R++ IL DA L A Sbjct: 181 GSLKSNNLTYGHRFLSNGEPIQIRRFDDYVTQLENHKVILDAERRKDIILADAQNLCFAN 240 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT--RTREG 297 GLEL+EDK LLEE+ GLVEW V MG+FDK +L +P E+IRLTI+T+QKCFVT R +G Sbjct: 241 GLELIEDKALLEEVAGLVEWPVVLMGNFDKTFLNIPPEIIRLTIQTHQKCFVTHKRGEKG 300 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FILV+NI ASD G I +GNS+VV ARL DAL+FW+ DQ NLPN++ L+ SA K Sbjct: 301 KLSNHFILVANILASDKGIEISKGNSKVVHARLSDALYFWQTDQCNLPNITRLESSAKKL 360 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +LDL+KPLDQR+A LD L+V FH K+GTQG RV RI L + IA L AD L RA VL Sbjct: 361 DLDLNKPLDQRIAHLDYLNVTFHTKLGTQGARVERIATLTQTIAPLAQADSILAKRAAVL 420 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T IV EFPELQG IG++YA+LQ E+ +AIE+H KP GP + +P I+ITV Sbjct: 421 AKADLQTGIVSEFPELQGLIGRKYALLQGEDPRVAEAIEDHYKPLGPKDRIPFEPIAITV 480 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL--- 534 +LADK+DTLI FW INEKP+ SKDPYALRRA LG+I++IL N I L + Sbjct: 481 ALADKIDTLIGFWFINEKPTSSKDPYALRRAALGVIKLILLNDWKINLIPLLHQAMNCLL 540 Query: 535 -------------------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + FFH+RLK YL D RHD+IEA+L Sbjct: 541 QQKIKYATSEIESVQLQNMSIEKKENIILDLLAFFHERLKGYLKDEGARHDIIEAVLTKS 600 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +D++L I ++ L F ++ G+ L++ KR IL E KK I ++ P+ + Sbjct: 601 DDDILFITRRVEALTFFINTHDGDSLLIAVKRAINILENEIKKGTAIINKVKPELFIETE 660 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK+LY + I + + + + L + +PI FF++V VN D+ +R NR + Sbjct: 661 EKQLYQATIETEKKIADHIHVTELSSVLNSLSLLKKPINAFFEKVFVNDDNINIRANRFA 720 Query: 684 LLQYIKNIILIVINVQKI 701 LL+ I+ + V + K+ Sbjct: 721 LLERIRIVTQRVADFSKL 738 >gi|206579067|ref|YP_002236067.1| glycyl-tRNA synthetase, beta subunit [Klebsiella pneumoniae 342] gi|238064853|sp|B5XMY7|SYGB_KLEP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|206568125|gb|ACI09901.1| glycyl-tRNA synthetase, beta subunit [Klebsiella pneumoniae 342] Length = 689 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 338/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLGVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ + L AE +L + Sbjct: 566 AVSHFRTLEESSALAAANKRVSNILA---KSDETLNDIVHASVLKEAAEIKLAGNLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|293412993|ref|ZP_06655661.1| glycyl-tRNA synthetase [Escherichia coli B354] gi|291468640|gb|EFF11133.1| glycyl-tRNA synthetase [Escherichia coli B354] Length = 689 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|330002313|ref|ZP_08304293.1| glycine--tRNA ligase, beta subunit [Klebsiella sp. MS 92-3] gi|328537334|gb|EGF63585.1| glycine--tRNA ligase, beta subunit [Klebsiella sp. MS 92-3] Length = 689 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ + L AE +L + Sbjct: 566 AVSHFRTLEESSALAAANKRVSNILA---KSDETLNDIVHASVLKEAAEIKLAGNLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|163742176|ref|ZP_02149564.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis 2.10] gi|161384506|gb|EDQ08887.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis 2.10] Length = 704 Score = 805 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 288/728 (39%), Positives = 417/728 (57%), Gaps = 53/728 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRMTDGLVEAGLTYAGAHALSTPRRLTLAMEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA KAI+GFLR GL + ++ KG VY A++ KP R Sbjct: 61 EHSPTVREERKGPKVGAPDKAIEGFLRGAGLTRDQLEE--RETPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PW KSMRW T + W+RPL+SI+C+L ED +++ L++ Sbjct: 119 AEIIAEVLEDTIRNFPWSKSMRWGTG-----SLRWVRPLQSIVCLLSKED-GAEVVPLNI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GNITYGHRF AP I V D Y L+ A V+LDP R AI +A A A G Sbjct: 173 DGIASGNITYGHRFIAPDQITVTGFDDYAAKLKRAHVVLDPAEREAAIWQEATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG+ D ++L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLMGAIDDEFLALPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRTVTE-------------- 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + + +L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 339 --QGFEPWVGKLG--NVTFHNKLGTQAARIDRIAALAREIALVVGADADLAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A E H P GP ++VPT +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPQDVAKACEAHYSPLGPSDDVPTEPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---------- 530 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + L + I Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENDVRMGLREIIGLHFSAMENSL 514 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLI 574 +QNL+ FFHDRLK++L D+ IRHD+I+A + ND+L +V + Sbjct: 515 PADVKKTEHWDAILVEQNLLFFFHDRLKVFLRDQGIRHDVIDACIAMNGNDDLTLLVKRV 574 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISD 633 + L +F +S G L KR ILA E+K+ E S ++ ++E L+ ++ Sbjct: 575 RALEDFMASDDGPNLLQGFKRANNILAQAEEKDGVEYSYGADKKFAEDDSEIPLFDALAQ 634 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I +++ + + + ++ P++ FF+ V VN D+ VR NRL+LL I+ + Sbjct: 635 SEGAISSAIEAEDFAAAMGSMAALRVPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVCG 694 Query: 694 IVINVQKI 701 V ++ +I Sbjct: 695 QVADLTRI 702 >gi|288933065|ref|YP_003437124.1| glycyl-tRNA synthetase subunit beta [Klebsiella variicola At-22] gi|288887794|gb|ADC56112.1| glycyl-tRNA synthetase, beta subunit [Klebsiella variicola At-22] Length = 689 Score = 805 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 338/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNANVVDDVIDFMLGRFRAWYQDEGYGVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ + L AE +L + Sbjct: 566 AVSHFRTLEESSALAAANKRVSNILA---KSDETLNDIVHASVLKEAAEIKLAGNLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAAGRYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|218550844|ref|YP_002384635.1| glycyl-tRNA synthetase subunit beta [Escherichia fergusonii ATCC 35469] gi|218707192|ref|YP_002414711.1| glycyl-tRNA synthetase subunit beta [Escherichia coli UMN026] gi|293407181|ref|ZP_06651105.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1412] gi|298382930|ref|ZP_06992525.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1302] gi|300898729|ref|ZP_07117041.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 198-1] gi|331665183|ref|ZP_08366084.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA143] gi|331675048|ref|ZP_08375805.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA280] gi|226737054|sp|B7NEL0|SYGB_ECOLU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737056|sp|B7LTH3|SYGB_ESCF3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218358385|emb|CAQ91032.1| glycine tRNA synthetase, beta subunit [Escherichia fergusonii ATCC 35469] gi|218434289|emb|CAR15211.1| glycine tRNA synthetase, beta subunit [Escherichia coli UMN026] gi|284923591|emb|CBG36687.1| glycine-tRNA synthetase, beta subunit [Escherichia coli 042] gi|291425992|gb|EFE99026.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1412] gi|298276766|gb|EFI18284.1| glycyl-tRNA synthetase beta subunit [Escherichia coli FVEC1302] gi|300357647|gb|EFJ73517.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 198-1] gi|323975029|gb|EGB70138.1| glycyl-tRNA synthetase beta subunit [Escherichia coli TW10509] gi|324007365|gb|EGB76584.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 57-2] gi|324111897|gb|EGC05877.1| glycyl-tRNA synthetase beta subunit [Escherichia fergusonii B253] gi|331057693|gb|EGI29679.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA143] gi|331067957|gb|EGI39355.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA280] Length = 689 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|170682940|ref|YP_001745846.1| glycyl-tRNA synthetase subunit beta [Escherichia coli SMS-3-5] gi|218702324|ref|YP_002409953.1| glycyl-tRNA synthetase subunit beta [Escherichia coli IAI39] gi|226737052|sp|B7NP55|SYGB_ECO7I RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737055|sp|B1LJC0|SYGB_ECOSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170520658|gb|ACB18836.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli SMS-3-5] gi|218372310|emb|CAR20175.1| glycine tRNA synthetase, beta subunit [Escherichia coli IAI39] Length = 689 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|331655194|ref|ZP_08356193.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M718] gi|331047209|gb|EGI19287.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M718] Length = 689 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEALSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|118590816|ref|ZP_01548217.1| glycyl-tRNA synthetase subunit beta [Stappia aggregata IAM 12614] gi|118436792|gb|EAV43432.1| glycyl-tRNA synthetase subunit beta [Stappia aggregata IAM 12614] Length = 695 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 304/721 (42%), Positives = 418/721 (57%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAAEDL ++ L + G+ Y+ + + TP RL L++ G+ Sbjct: 1 MPDLLLELFSEEIPARMQRKAAEDLKSLVTNALVDAGLPYEGAKAFATPRRLALHVAGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA++GFLR GL +I I+ DPKKGD Y+AV+ KP R Sbjct: 61 AGSAATREERKGPRVGAPEKALEGFLRGAGLTSIDQATIQTDPKKGDFYVAVIEKPGRSA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ +P ++ PWP +MRW + W+RPL SI+ E + ++ + Sbjct: 121 IDVIAEFMPGILRNFPWPITMRWGAATT-----RWVRPLHSIVATFGPETEEPDVVSFEF 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF A V+ D Y LE+ V+LD + R++ I NDA A A+G Sbjct: 176 DGIKAGKTTRGHRFLADEAFDVRRFDDYAPALEKHKVVLDADRRKDIIQNDAKDCALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 L+LVED LLEE+ GLVEW V GSFD+ +L +P+E I+LTIK NQKCFV + G L Sbjct: 236 LDLVEDPGLLEEVAGLVEWPVVLTGSFDEDFLTIPDECIQLTIKVNQKCFVLKNPATGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L+SNI A DGG IV GN +V+ ARL DA FW+ D Sbjct: 296 ANKFVLISNIIADDGGKLIVAGNEKVIRARLSDARFFWETD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L + +LD +V FH K+G+ GERV R+ L ++A + AD RA L+K Sbjct: 337 -LKSKLSDNLPKLD--EVKFHEKLGSVGERVKRMIALSAELAPVAGADETKAKRAAELAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ S AIEEH KP+GP ++VPT+ +++ V+L Sbjct: 394 ADLVSNMVFEFPELQGLMGRYYATAQGEDASVATAIEEHYKPQGPSDSVPTDPVAVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 A+KLD L FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + I L + Sbjct: 454 AEKLDLLAGFWAIDEKPTGSKDPYALRRAALGVIRIVLENNLRIRLGDILRSALDLQGVK 513 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRLK++L D RHDLI+AI D++L +V ++ L +F S Sbjct: 514 TADPAALVADLLSFFADRLKVHLRDEGARHDLIDAIFALEGQDDVLMVVRRVEALGKFVS 573 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G L KR IL EEKK+ +S + P + +AE L A I ++ Sbjct: 574 SDDGTNLLAGYKRAVNILKAEEKKDGAAVSGKPHPDHFQEQAEIDLAAAIDVARAEAADA 633 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + L + P++ FF +LVN +D +R NRL LL I++ +V + K+ Sbjct: 634 VASENFEGAMEALSKLRAPVDRFFVDILVNAEDATLRMNRLQLLAEIRDATHVVADFSKV 693 Query: 702 V 702 Sbjct: 694 A 694 >gi|320639879|gb|EFX09473.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. G5101] Length = 689 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 340/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + ++ KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAVANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|15833696|ref|NP_312469.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. Sakai] gi|26250200|ref|NP_756240.1| glycyl-tRNA synthetase subunit beta [Escherichia coli CFT073] gi|91213072|ref|YP_543058.1| glycyl-tRNA synthetase subunit beta [Escherichia coli UTI89] gi|110643806|ref|YP_671536.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 536] gi|117625841|ref|YP_859164.1| glycyl-tRNA synthetase subunit beta [Escherichia coli APEC O1] gi|168746896|ref|ZP_02771918.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|168753378|ref|ZP_02778385.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|168759650|ref|ZP_02784657.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|168765973|ref|ZP_02790980.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|168772480|ref|ZP_02797487.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|168779709|ref|ZP_02804716.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|168785430|ref|ZP_02810437.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|168797396|ref|ZP_02822403.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|191170372|ref|ZP_03031925.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli F11] gi|195935089|ref|ZP_03080471.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. EC4024] gi|208808060|ref|ZP_03250397.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208812785|ref|ZP_03254114.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208820866|ref|ZP_03261186.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209399717|ref|YP_002273044.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|215488843|ref|YP_002331274.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O127:H6 str. E2348/69] gi|217326136|ref|ZP_03442220.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|218560634|ref|YP_002393547.1| glycyl-tRNA synthetase subunit beta [Escherichia coli S88] gi|218691848|ref|YP_002400060.1| glycyl-tRNA synthetase subunit beta [Escherichia coli ED1a] gi|227883725|ref|ZP_04001530.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 83972] gi|237703329|ref|ZP_04533810.1| glycyl-tRNA synthetase subunit beta [Escherichia sp. 3_2_53FAA] gi|254795515|ref|YP_003080352.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. TW14359] gi|261224877|ref|ZP_05939158.1| glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261254224|ref|ZP_05946757.1| glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. FRIK966] gi|291284935|ref|YP_003501753.1| Glycyl-tRNA synthetase beta subunit [Escherichia coli O55:H7 str. CB9615] gi|300971418|ref|ZP_07171453.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 45-1] gi|300976958|ref|ZP_07173693.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 200-1] gi|301047087|ref|ZP_07194188.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 185-1] gi|331649389|ref|ZP_08350475.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M605] gi|54039662|sp|P67031|SYGB_ECO57 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|54042277|sp|P67030|SYGB_ECOL6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123265949|sp|Q1R537|SYGB_ECOUT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123343488|sp|Q0TBP4|SYGB_ECOL5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166227912|sp|A1AHA0|SYGB_ECOK1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737051|sp|B7MER4|SYGB_ECO45 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238064849|sp|B5YVL1|SYGB_ECO5E RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781848|sp|B7ULB9|SYGB_ECO27 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781850|sp|B7N1L1|SYGB_ECO81 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|26110629|gb|AAN82814.1|AE016768_232 Glycyl-tRNA synthetase beta chain [Escherichia coli CFT073] gi|13363916|dbj|BAB37865.1| glycine tRNA synthetase beta subunit [Escherichia coli O157:H7 str. Sakai] gi|91074646|gb|ABE09527.1| glycine tRNA synthetase beta subunit [Escherichia coli UTI89] gi|110345398|gb|ABG71635.1| glycyl-tRNA synthetase beta chain [Escherichia coli 536] gi|115514965|gb|ABJ03040.1| glycyl-tRNA synthetase subunit beta [Escherichia coli APEC O1] gi|187771698|gb|EDU35542.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|188018299|gb|EDU56421.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|189002608|gb|EDU71594.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|189359259|gb|EDU77678.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|189364795|gb|EDU83214.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|189369719|gb|EDU88135.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|189374282|gb|EDU92698.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC869] gi|189380084|gb|EDU98500.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC508] gi|190909180|gb|EDV68766.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli F11] gi|208727861|gb|EDZ77462.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208734062|gb|EDZ82749.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208740989|gb|EDZ88671.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209161117|gb|ACI38550.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|209755198|gb|ACI75911.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755200|gb|ACI75912.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755202|gb|ACI75913.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755204|gb|ACI75914.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|209755206|gb|ACI75915.1| glycine tRNA synthetase beta subunit [Escherichia coli] gi|215266915|emb|CAS11358.1| glycine tRNA synthetase, beta subunit [Escherichia coli O127:H6 str. E2348/69] gi|217322357|gb|EEC30781.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|218367403|emb|CAR05185.1| glycine tRNA synthetase, beta subunit [Escherichia coli S88] gi|218429412|emb|CAR10231.1| glycine tRNA synthetase, beta subunit [Escherichia coli ED1a] gi|226902593|gb|EEH88852.1| glycyl-tRNA synthetase subunit beta [Escherichia sp. 3_2_53FAA] gi|227839305|gb|EEJ49771.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 83972] gi|254594915|gb|ACT74276.1| glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14359] gi|281180603|dbj|BAI56933.1| glycyl-tRNA synthetase beta subunit [Escherichia coli SE15] gi|290764808|gb|ADD58769.1| Glycyl-tRNA synthetase beta subunit [Escherichia coli O55:H7 str. CB9615] gi|294489492|gb|ADE88248.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli IHE3034] gi|300301004|gb|EFJ57389.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 185-1] gi|300308428|gb|EFJ62948.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 200-1] gi|300411252|gb|EFJ94790.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 45-1] gi|307555663|gb|ADN48438.1| glycine tRNA synthetase beta subunit [Escherichia coli ABU 83972] gi|307628640|gb|ADN72944.1| glycyl-tRNA synthetase subunit beta [Escherichia coli UM146] gi|315285316|gb|EFU44761.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 110-3] gi|315294114|gb|EFU53466.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 153-1] gi|315300121|gb|EFU59359.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 16-3] gi|320191385|gb|EFW66035.1| Glycyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. EC1212] gi|320645042|gb|EFX14066.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H- str. 493-89] gi|320650309|gb|EFX18792.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H- str. H 2687] gi|320655884|gb|EFX23807.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661664|gb|EFX29079.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O55:H7 str. USDA 5905] gi|320666688|gb|EFX33671.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. LSU-61] gi|323189399|gb|EFZ74681.1| glycyl-tRNA synthetase beta subunit [Escherichia coli RN587/1] gi|323949802|gb|EGB45686.1| glycyl-tRNA synthetase beta subunit [Escherichia coli H252] gi|323954897|gb|EGB50677.1| glycyl-tRNA synthetase beta subunit [Escherichia coli H263] gi|324014233|gb|EGB83452.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 60-1] gi|326337437|gb|EGD61272.1| Glycyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. 1044] gi|326339962|gb|EGD63769.1| Glycyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. 1125] gi|330909621|gb|EGH38135.1| glycyl-tRNA synthetase beta chain [Escherichia coli AA86] gi|331041887|gb|EGI14031.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli M605] Length = 689 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|331659874|ref|ZP_08360812.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA206] gi|331053089|gb|EGI25122.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA206] Length = 689 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|325499117|gb|EGC96976.1| glycyl-tRNA synthetase subunit beta [Escherichia fergusonii ECD227] Length = 689 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RI++E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRILVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|300920443|ref|ZP_07136877.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 115-1] gi|300412576|gb|EFJ95886.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 115-1] Length = 689 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|323966028|gb|EGB61469.1| glycyl-tRNA synthetase beta subunit [Escherichia coli M863] gi|327251210|gb|EGE62903.1| glycyl-tRNA synthetase beta subunit [Escherichia coli STEC_7v] Length = 689 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESQDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|301020273|ref|ZP_07184391.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 69-1] gi|300398850|gb|EFJ82388.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 69-1] Length = 689 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLSHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPAVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|320193929|gb|EFW68562.1| Glycyl-tRNA synthetase beta chain [Escherichia coli WV_060327] Length = 689 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|293417006|ref|ZP_06659643.1| glycyl-tRNA synthetase [Escherichia coli B185] gi|291431582|gb|EFF04567.1| glycyl-tRNA synthetase [Escherichia coli B185] Length = 689 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEHIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|16131430|ref|NP_418016.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|89110454|ref|AP_004234.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. W3110] gi|157163035|ref|YP_001460353.1| glycyl-tRNA synthetase subunit beta [Escherichia coli HS] gi|170018211|ref|YP_001723165.1| glycyl-tRNA synthetase subunit beta [Escherichia coli ATCC 8739] gi|170083068|ref|YP_001732388.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|194435847|ref|ZP_03067950.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 101-1] gi|238902648|ref|YP_002928444.1| glycine tRNA synthetase, beta subunit [Escherichia coli BW2952] gi|253771606|ref|YP_003034437.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038744|ref|ZP_04872800.1| glycyl-tRNA synthetase beta subunit [Escherichia sp. 1_1_43] gi|254163483|ref|YP_003046591.1| glycyl-tRNA synthetase subunit beta [Escherichia coli B str. REL606] gi|256025713|ref|ZP_05439578.1| glycyl-tRNA synthetase subunit beta [Escherichia sp. 4_1_40B] gi|300930911|ref|ZP_07146276.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 187-1] gi|300950351|ref|ZP_07164281.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 116-1] gi|301028172|ref|ZP_07191443.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 196-1] gi|301646007|ref|ZP_07245913.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 146-1] gi|307140250|ref|ZP_07499606.1| glycyl-tRNA synthetase subunit beta [Escherichia coli H736] gi|312972165|ref|ZP_07786339.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1827-70] gi|331644271|ref|ZP_08345400.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H736] gi|586056|sp|P00961|SYGB_ECOLI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166980038|sp|A8A616|SYGB_ECOHS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189082267|sp|B1IZN4|SYGB_ECOLC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229470697|sp|B1X8H5|SYGB_ECODH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|259511923|sp|C4ZXE9|SYGB_ECOBW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|466697|gb|AAB18536.1| glycine-tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|1789982|gb|AAC76583.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|85676485|dbj|BAE77735.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K12 substr. W3110] gi|157068715|gb|ABV07970.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli HS] gi|169753139|gb|ACA75838.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli ATCC 8739] gi|169890903|gb|ACB04610.1| glycine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|194425390|gb|EDX41374.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 101-1] gi|226839250|gb|EEH71273.1| glycyl-tRNA synthetase beta subunit [Escherichia sp. 1_1_43] gi|238861373|gb|ACR63371.1| glycine tRNA synthetase, beta subunit [Escherichia coli BW2952] gi|242379077|emb|CAQ33878.1| glycyl-tRNA synthetase, beta subunit, subunit of glycyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253322650|gb|ACT27252.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975384|gb|ACT41055.1| glycyl-tRNA synthetase subunit beta [Escherichia coli B str. REL606] gi|253979540|gb|ACT45210.1| glycyl-tRNA synthetase subunit beta [Escherichia coli BL21(DE3)] gi|260447424|gb|ACX37846.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli DH1] gi|299878749|gb|EFI86960.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 196-1] gi|300450317|gb|EFK13937.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 116-1] gi|300461230|gb|EFK24723.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 187-1] gi|301075759|gb|EFK90565.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 146-1] gi|310334542|gb|EFQ00747.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1827-70] gi|315138136|dbj|BAJ45295.1| glycyl-tRNA synthetase subunit beta [Escherichia coli DH1] gi|315618402|gb|EFU98989.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 3431] gi|323934887|gb|EGB31269.1| glycyl-tRNA synthetase beta [Escherichia coli E1520] gi|323939541|gb|EGB35749.1| glycyl-tRNA synthetase beta subunit [Escherichia coli E482] gi|323959375|gb|EGB55035.1| glycyl-tRNA synthetase beta subunit [Escherichia coli H489] gi|323971318|gb|EGB66560.1| glycyl-tRNA synthetase beta subunit [Escherichia coli TA007] gi|331036565|gb|EGI08791.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H736] gi|332345527|gb|AEE58861.1| glycyl-tRNA synthetase beta subunit GlyS [Escherichia coli UMNK88] Length = 689 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|188493970|ref|ZP_03001240.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 53638] gi|188489169|gb|EDU64272.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli 53638] Length = 689 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVAMNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|170766599|ref|ZP_02901052.1| glycyl-tRNA synthetase, beta subunit [Escherichia albertii TW07627] gi|170124037|gb|EDS92968.1| glycyl-tRNA synthetase, beta subunit [Escherichia albertii TW07627] Length = 689 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 338/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAQAQPDREIEKRGPAIAQAFDAEGNPTKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQADRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|222035273|emb|CAP78018.1| glycyl-tRNA synthetase beta chain [Escherichia coli LF82] gi|312948124|gb|ADR28951.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O83:H1 str. NRG 857C] Length = 689 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|300937166|ref|ZP_07152019.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 21-1] gi|300457752|gb|EFK21245.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 21-1] Length = 689 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGESEFTIDNADQYPEILRERGRVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|156936270|ref|YP_001440187.1| glycyl-tRNA synthetase subunit beta [Cronobacter sakazakii ATCC BAA-894] gi|166227913|sp|A7MKS3|SYGB_ENTS8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|156534524|gb|ABU79350.1| hypothetical protein ESA_04169 [Cronobacter sakazakii ATCC BAA-894] Length = 689 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDAAGLAHGVVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LAASQPDREVEKRGPAVSAAFDAEGNPSKAAEGWARGCGITVDQAERLVTD--KGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAQALLPNMVSTALSKLPIPKLMRWGASD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ + I + GHRF + D Y + LE V+ D R+ I Sbjct: 169 DDEVLPATILGIQSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYNARKAKIQQ 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYGTDGKLLPNFIFVANIESKDPRQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGTLRDKTDRIQALSGWIASQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVAVALNEQYMPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + D D I+A+L +K Sbjct: 506 EAVRLYGSKLTNAKVVDDVVDFMLGRFRAWYQDEGYSVDTIQAVLANRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ E+ L + E RL ++ Sbjct: 566 AVSHFRTLDEAVALAAANKRVSNILA---KATEPLNDEVHASVLKEDPEIRLALQVAVMR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L + EP++ FF++V+VN DD +VR NRL+LL ++ + L V Sbjct: 623 DKLQPLFAEGRYQEALVELAQLREPVDEFFEKVMVNADDAQVRINRLTLLSKLRALFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|300957594|ref|ZP_07169796.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 175-1] gi|300315662|gb|EFJ65446.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 175-1] Length = 689 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLENNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|74314188|ref|YP_312607.1| glycyl-tRNA synthetase subunit beta [Shigella sonnei Ss046] gi|157156177|ref|YP_001465034.1| glycyl-tRNA synthetase subunit beta [Escherichia coli E24377A] gi|218697274|ref|YP_002404941.1| glycyl-tRNA synthetase subunit beta [Escherichia coli 55989] gi|256020906|ref|ZP_05434771.1| glycyl-tRNA synthetase subunit beta [Shigella sp. D9] gi|293453868|ref|ZP_06664287.1| glycyl-tRNA synthetase [Escherichia coli B088] gi|300925635|ref|ZP_07141500.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 182-1] gi|307314647|ref|ZP_07594247.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli W] gi|332282126|ref|ZP_08394539.1| glycyl-tRNA synthetase subunit beta [Shigella sp. D9] gi|123759516|sp|Q3YVU0|SYGB_SHISS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166980037|sp|A7ZTA5|SYGB_ECO24 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781849|sp|B7L6X3|SYGB_ECO55 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|73857665|gb|AAZ90372.1| glycine tRNA synthetase, beta subunit [Shigella sonnei Ss046] gi|157078207|gb|ABV17915.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E24377A] gi|218354006|emb|CAV00497.1| glycine tRNA synthetase, beta subunit [Escherichia coli 55989] gi|291321994|gb|EFE61425.1| glycyl-tRNA synthetase [Escherichia coli B088] gi|300418253|gb|EFK01564.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 182-1] gi|306905860|gb|EFN36384.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli W] gi|315062845|gb|ADT77172.1| glycine tRNA synthetase, beta subunit [Escherichia coli W] gi|323166949|gb|EFZ52688.1| glycyl-tRNA synthetase beta subunit [Shigella sonnei 53G] gi|323174217|gb|EFZ59845.1| glycyl-tRNA synthetase beta subunit [Escherichia coli LT-68] gi|323182714|gb|EFZ68116.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1357] gi|323376564|gb|ADX48832.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli KO11] gi|324116562|gb|EGC10479.1| glycyl-tRNA synthetase beta subunit [Escherichia coli E1167] gi|332104478|gb|EGJ07824.1| glycyl-tRNA synthetase subunit beta [Shigella sp. D9] Length = 689 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|83952444|ref|ZP_00961175.1| glycyl-tRNA synthetase beta subunit [Roseovarius nubinhibens ISM] gi|83836117|gb|EAP75415.1| glycyl-tRNA synthetase beta subunit [Roseovarius nubinhibens ISM] Length = 692 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 285/716 (39%), Positives = 408/716 (56%), Gaps = 41/716 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAAEDL + L E G+ Y + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQAKAAEDLRQRVTDGLVEAGLTYAGAASFSTPRRLTLAIEGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A +KAI+GFLR G+ D +D KKG VY AV+ KP R Sbjct: 61 AQSPTLREERKGPRVDAPEKAIEGFLRGAGVS--RDELEVRDEKKGQVYFAVISKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E+++ ++ I+ PWPKSMRW + W+RPL SILC++ + + I+ +D+ Sbjct: 119 EEIVAEVLEQTIRNFPWPKSMRWGAG-----SLRWVRPLHSILCLMTNDAGEAHIVPMDV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V S + Y L+ A V+LDPE R AI +A LA A G Sbjct: 174 DGITAGDSTEGHRFMAPGRFAVTSFEDYAAKLKRAYVVLDPEERAQAIWQEASNLAFAAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +ELVEDK LL E+ GLVEW MG+ D+ +L LP E+++ ++K +QK F + + Sbjct: 234 MELVEDKGLLREVAGLVEWPVPLMGAIDEAFLGLPPEVLQTSMKEHQKFFSVKNPKTGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW+ D + Sbjct: 294 EKFVTVANRETADHGATILAGNQKVLSARLADAKFFWENDLREAEAGGTA---------- 343 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +A LD +V FH K+G+Q R+ RI L ++IA + AD L ++A +KA Sbjct: 344 -------WLASLD--NVTFHNKLGSQAARIDRIAALAREIAGVTGADADLAEQAARWAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A +EH P GP ++VPT +S+TV+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEKAGLPAEVAGAAQEHYSPLGPSDDVPTAPVSVTVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + + + I Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENGLSLNMDEAIAKGLGQQPGAT 514 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKG 586 +L+ F HDRLK+YL D +RHD+I+A L ND+L +V + L E + G Sbjct: 515 DGAAADLLSFIHDRLKVYLRDEGLRHDVIDACLAMEGNDDLALVVKRARALGEMLGTEDG 574 Query: 587 EKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E L KR IL+ E K+ E S ++ E E+ L+A + I ++ + Sbjct: 575 ENLLQGFKRANNILSQAEDKDGVEYSYGADVKFAETEEERALFAALDAAEPKIAAALKAQ 634 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + ++ PI+ FF+ V VN D VR NRL+LL I+ ++ V ++ ++ Sbjct: 635 DFNAAMAAMAALRAPIDAFFEAVQVNTDKDVVRRNRLNLLSRIRGLVGSVADLTRV 690 >gi|24114835|ref|NP_709345.1| glycyl-tRNA synthetase subunit beta [Shigella flexneri 2a str. 301] gi|30065154|ref|NP_839325.1| glycyl-tRNA synthetase subunit beta [Shigella flexneri 2a str. 2457T] gi|110807772|ref|YP_691292.1| glycyl-tRNA synthetase subunit beta [Shigella flexneri 5 str. 8401] gi|191165233|ref|ZP_03027076.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B7A] gi|193061668|ref|ZP_03042765.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E22] gi|194427395|ref|ZP_03059944.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B171] gi|209921023|ref|YP_002295107.1| glycyl-tRNA synthetase subunit beta [Escherichia coli SE11] gi|260846727|ref|YP_003224505.1| glycine tRNA synthetase, beta subunit [Escherichia coli O103:H2 str. 12009] gi|260858046|ref|YP_003231937.1| glycine tRNA synthetase, beta subunit [Escherichia coli O26:H11 str. 11368] gi|260870289|ref|YP_003236691.1| glycine tRNA synthetase, beta subunit [Escherichia coli O111:H- str. 11128] gi|300815213|ref|ZP_07095438.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 107-1] gi|300822039|ref|ZP_07102182.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 119-7] gi|300902750|ref|ZP_07120705.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 84-1] gi|301304611|ref|ZP_07210720.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 124-1] gi|309797584|ref|ZP_07691973.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 145-7] gi|331670392|ref|ZP_08371231.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA271] gi|331679639|ref|ZP_08380309.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H591] gi|81839217|sp|Q83J38|SYGB_SHIFL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123146479|sp|Q0SY78|SYGB_SHIF8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238064850|sp|B6I3C9|SYGB_ECOSE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24054068|gb|AAN45052.1| glycine tRNA synthetase, beta subunit [Shigella flexneri 2a str. 301] gi|30043415|gb|AAP19136.1| glycine tRNA synthetase, beta subunit [Shigella flexneri 2a str. 2457T] gi|110617320|gb|ABF05987.1| glycine tRNA synthetase, beta subunit [Shigella flexneri 5 str. 8401] gi|190904635|gb|EDV64341.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B7A] gi|192932458|gb|EDV85055.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E22] gi|194414435|gb|EDX30708.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli B171] gi|209914282|dbj|BAG79356.1| glycyl-tRNA synthase beta subunit [Escherichia coli SE11] gi|257756695|dbj|BAI28197.1| glycine tRNA synthetase, beta subunit [Escherichia coli O26:H11 str. 11368] gi|257761874|dbj|BAI33371.1| glycine tRNA synthetase, beta subunit [Escherichia coli O103:H2 str. 12009] gi|257766645|dbj|BAI38140.1| glycine tRNA synthetase, beta subunit [Escherichia coli O111:H- str. 11128] gi|281602927|gb|ADA75911.1| Glycyl-tRNA synthetase beta subunit [Shigella flexneri 2002017] gi|300405178|gb|EFJ88716.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 84-1] gi|300525402|gb|EFK46471.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 119-7] gi|300532105|gb|EFK53167.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 107-1] gi|300840089|gb|EFK67849.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 124-1] gi|308118854|gb|EFO56116.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 145-7] gi|315254088|gb|EFU34056.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 85-1] gi|320201420|gb|EFW76001.1| Glycyl-tRNA synthetase beta chain [Escherichia coli EC4100B] gi|323153887|gb|EFZ40121.1| glycyl-tRNA synthetase beta subunit [Escherichia coli EPECa14] gi|323160673|gb|EFZ46612.1| glycyl-tRNA synthetase beta subunit [Escherichia coli E128010] gi|323944544|gb|EGB40615.1| glycyl-tRNA synthetase beta [Escherichia coli H120] gi|324017914|gb|EGB87133.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 117-3] gi|331062454|gb|EGI34374.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli TA271] gi|331072811|gb|EGI44136.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli H591] gi|332749993|gb|EGJ80405.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-671] gi|332750151|gb|EGJ80562.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri 4343-70] gi|332751419|gb|EGJ81822.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri 2747-71] gi|332764240|gb|EGJ94477.1| glycyl-tRNA synthetase, &beta subunit [Shigella flexneri 2930-71] gi|332996373|gb|EGK16000.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri VA-6] gi|332996921|gb|EGK16540.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-272] gi|332997029|gb|EGK16645.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-218] gi|333012812|gb|EGK32189.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-304] gi|333013392|gb|EGK32764.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri K-227] Length = 689 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|218556118|ref|YP_002389031.1| glycyl-tRNA synthetase subunit beta [Escherichia coli IAI1] gi|226737053|sp|B7M3I1|SYGB_ECO8A RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218362886|emb|CAR00520.1| glycine tRNA synthetase, beta subunit [Escherichia coli IAI1] Length = 689 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTSD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|306816088|ref|ZP_07450226.1| glycyl-tRNA synthetase subunit beta [Escherichia coli NC101] gi|305850484|gb|EFM50941.1| glycyl-tRNA synthetase subunit beta [Escherichia coli NC101] Length = 689 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGNVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|260599858|ref|YP_003212429.1| glycyl-tRNA synthetase subunit beta [Cronobacter turicensis z3032] gi|260219035|emb|CBA34390.1| Glycyl-tRNA synthetase beta subunit [Cronobacter turicensis z3032] Length = 689 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDAAGLTHGVVSWFAAPRRLALKVAS 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LAASQPDREVEKRGPAVSAAFDAEGNPSKAAEGWARGCGITVDQAERLVTD--KGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAQALLPNMVSTALSKLPIPKLMRWGASD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ + I + GHRF + D Y + LE V+ D R+ I Sbjct: 169 DDEVLPATILGIQSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYNARKAKIQQ 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYGTDGKLLPNFIFVANIESRDPHQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGTLRDKTDRIQALSGWIANQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVAVALNEQYMPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ V++ADK+DTL + I + P G KDP+ALRRA LG +RII+E + + L E Sbjct: 446 SLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +++ F R + + D D I+A+L +K Sbjct: 506 EAVRLYGSKLTNAKVVDDVVDFMLGRFRAWYQDEGYSVDTIQAVLANRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K N ++ E+ L + E RL ++ Sbjct: 566 AVSHFRTLDEAVALAAANKRVSNILA---KANEPLNDEVHASVLKEDPEIRLALQVAVMR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L + EP++ FF++V+VN DD +VR NRL+LL ++ + L V Sbjct: 623 DKLQPLFAEGRYQEALVELAQLREPVDEFFEKVMVNADDAQVRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|323179478|gb|EFZ65045.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 1180] Length = 689 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 340/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPSMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|309703962|emb|CBJ03305.1| glycine-tRNA synthetase, beta subunit [Escherichia coli ETEC H10407] Length = 689 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 DPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|194431308|ref|ZP_03063601.1| glycyl-tRNA synthetase, beta subunit [Shigella dysenteriae 1012] gi|194420763|gb|EDX36839.1| glycyl-tRNA synthetase, beta subunit [Shigella dysenteriae 1012] gi|320182075|gb|EFW56980.1| Glycyl-tRNA synthetase beta chain [Shigella boydii ATCC 9905] gi|332085078|gb|EGI90258.1| glycyl-tRNA synthetase beta subunit [Shigella boydii 5216-82] gi|332085634|gb|EGI90798.1| glycyl-tRNA synthetase beta subunit [Shigella dysenteriae 155-74] Length = 689 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 340/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL + V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQI--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|260563481|ref|ZP_05833967.1| glycyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265990534|ref|ZP_06103091.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|265999600|ref|ZP_05467081.2| glycyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|260153497|gb|EEW88589.1| glycyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|263001318|gb|EEZ13893.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|263094883|gb|EEZ18621.1| glycyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|326408438|gb|ADZ65503.1| glycyl-tRNA synthetase subunit beta [Brucella melitensis M28] gi|326538154|gb|ADZ86369.1| glycyl-tRNA synthetase, beta subunit [Brucella melitensis M5-90] Length = 761 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 337/760 (44%), Positives = 445/760 (58%), Gaps = 74/760 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ KAA DL ++ L + G+ Y+ YWTP RL L ++GL+ S + E+ GP V Sbjct: 1 MQRKAAGDLKKMITDGLVDAGLTYEAATAYWTPRRLALDIRGLTVRSKDVHEDIKGPSVS 60 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A ++AI GFLR GL +S + DPKKGD Y+A L KP R ED++ +VP I+ P Sbjct: 61 APEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAAEDIVAELVPQTIRNFP 120 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 WPKSMRW + A W+RPL+SILC E + K+ID D+ I GN+TYGHRF + Sbjct: 121 WPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDVDGIKSGNVTYGHRFLS 180 Query: 197 PH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 IKV+ + Y+ LE+A V+LD E R+ I DAH LA A GLELVED LLEE+ G Sbjct: 181 DGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFASGLELVEDDGLLEEVSG 240 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE---------------GVLA 300 LVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + L+ Sbjct: 241 LVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDASRLASPAPQHEEIQALS 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LD Sbjct: 301 NKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLD 360 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KA Sbjct: 361 LKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKA 420 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LA Sbjct: 421 DLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALA 480 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------E 530 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL + Sbjct: 481 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQ 540 Query: 531 DQNLILFFHDRLKL----------------------------------------YLHDR- 549 Q + F +L + HDR Sbjct: 541 MQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRF 600 Query: 550 -------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 R+D I+A+L PE DNLL + ++ L F + G+ L AKR ILA Sbjct: 601 KVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAA 660 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EEKK +++ + P L EK L+ ++ + E++ + ++ L + P++ Sbjct: 661 EEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVD 720 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 IFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 760 >gi|193068544|ref|ZP_03049506.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E110019] gi|192958195|gb|EDV88636.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli E110019] Length = 689 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAEFFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|237728873|ref|ZP_04559354.1| glycyl-tRNA synthetase subunit beta [Citrobacter sp. 30_2] gi|226909495|gb|EEH95413.1| glycyl-tRNA synthetase subunit beta [Citrobacter sp. 30_2] Length = 689 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGIAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAETLLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + S D Y L E V+ D R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDSADQYPEILRERGKVIADYAERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVHTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDPIQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSEETLNDRVNAATLKEPEEIALAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + EP++ FF++V+VNV+D+++R NRLS+L+ ++ + L V Sbjct: 623 DKLEPVFAAGRYQEALVELAELREPVDAFFEKVMVNVEDKDLRINRLSMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|261757637|ref|ZP_06001346.1| glycyl-tRNA synthetase [Brucella sp. F5/99] gi|261737621|gb|EEY25617.1| glycyl-tRNA synthetase [Brucella sp. F5/99] Length = 761 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 338/760 (44%), Positives = 446/760 (58%), Gaps = 74/760 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ S + E+ GP V Sbjct: 1 MQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLALDIRGLTVRSKDVHEDIKGPSVS 60 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A ++AI GFLR GL +S + DPKKGD Y+A L KP R ED++ +VP I+ P Sbjct: 61 APEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAAEDIVAELVPQTIRNFP 120 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 WPKSMRW + A W+RPL+SILC E + K+ID D+ I GN+TYGHRF + Sbjct: 121 WPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDVDGIKSGNVTYGHRFLS 180 Query: 197 PH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 IKV+ + Y+ LE+A V+LD E R+ I DAH LA A GLELVED LLEE+ G Sbjct: 181 DGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFASGLELVEDDGLLEEVSG 240 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE---------------GVLA 300 LVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + L+ Sbjct: 241 LVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDASRLASPAPQHEEIQALS 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LD Sbjct: 301 NKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLD 360 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KA Sbjct: 361 LKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKA 420 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LA Sbjct: 421 DLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALA 480 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------E 530 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL + Sbjct: 481 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQ 540 Query: 531 DQNLILFFHDRLKL----------------------------------------YLHDR- 549 Q + F +L + HDR Sbjct: 541 MQRKLREFEAKLAAENSGGVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRF 600 Query: 550 -------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 R+D I+A+L PE DNLL + ++ L F + G+ L AKR ILA Sbjct: 601 KVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAA 660 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EEKK +++ + P L EK L+ ++ + E++ + ++ L + P++ Sbjct: 661 EEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVD 720 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 IFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 760 >gi|320175983|gb|EFW51056.1| Glycyl-tRNA synthetase beta chain [Shigella dysenteriae CDC 74-1112] Length = 689 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTVELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|15804104|ref|NP_290143.1| glycyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 EDL933] gi|12518293|gb|AAG58707.1|AE005582_10 glycine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. EDL933] Length = 689 Score = 802 bits (2071), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANXXAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|187731977|ref|YP_001882247.1| glycyl-tRNA synthetase subunit beta [Shigella boydii CDC 3083-94] gi|238689523|sp|B2U566|SYGB_SHIB3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|187428969|gb|ACD08243.1| glycyl-tRNA synthetase, beta subunit [Shigella boydii CDC 3083-94] Length = 689 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTVELDNAGLAHGTVQWFAAPRRLTLKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|320187712|gb|EFW62387.1| Glycyl-tRNA synthetase beta chain [Shigella flexneri CDC 796-83] Length = 689 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 338/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + E + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|301328324|ref|ZP_07221428.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 78-1] gi|300845219|gb|EFK72979.1| glycyl-tRNA synthetase, beta subunit [Escherichia coli MS 78-1] Length = 689 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGGIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|261221621|ref|ZP_05935902.1| glycyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|260920205|gb|EEX86858.1| glycyl-tRNA synthetase subunit beta [Brucella ceti B1/94] Length = 761 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 338/760 (44%), Positives = 446/760 (58%), Gaps = 74/760 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ KAA DL ++I L + G+ Y+ YWTP RL L ++GL+ S + E+ GP V Sbjct: 1 MQRKAAGDLKKMIIDGLVDAGLTYEAATAYWTPRRLVLDIRGLTVRSKDVHEDIKGPSVS 60 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A ++AI GFLR GL +S + DPKKGD Y+A L KP R ED++ +VP I+ P Sbjct: 61 APEQAIQGFLRKAGLSDVSQAHVHSDPKKGDFYVAHLTKPGRAAEDIVAELVPQTIRNFP 120 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 WPKSMRW + A W+RPL+SILC E + K+ID D+ I GN+TYGHRF + Sbjct: 121 WPKSMRWGVASARPGALRWVRPLQSILCTFGPETEETKVIDFDVDGIKSGNVTYGHRFLS 180 Query: 197 PH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 IKV+ + Y+ LE+A V+LD E R+ I DAH LA A GLELVED LLEE+ G Sbjct: 181 DGQAIKVRRFEDYVEKLEKAFVVLDAERRKEIISQDAHNLAFASGLELVEDDGLLEEVSG 240 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE---------------GVLA 300 LVEW V MG F++++L +P E+IRLTI+ NQKCFVTR + L+ Sbjct: 241 LVEWPVVLMGEFEEEFLAIPPEVIRLTIRANQKCFVTRKQGDASRLASPAPQHEEIQALS 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSN+ A DGG I GN +VV ARL DAL+FW DQ++LP+L L SA KF LD Sbjct: 301 NKFILVSNVAARDGGTEIAYGNGKVVRARLSDALYFWHTDQHDLPDLDKLAASAEKFGLD 360 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L KPLDQRMARLD L+V FHAK+GTQG+RV RIR L +IA L+ AD L RA VL+KA Sbjct: 361 LKKPLDQRMARLDALNVTFHAKLGTQGQRVERIRELAAQIAPLVGADPKLAQRAAVLAKA 420 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G++YA+LQ E+ + A+EEH KP+GP + VP N +S+ V+LA Sbjct: 421 DLQTEVVGEFPELQGAMGRKYALLQGEDKAVAAALEEHYKPQGPSDVVPKNPVSVAVALA 480 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------E 530 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++L + PL + Sbjct: 481 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLSQEWKFPLLPLFRSAFAALQEGQ 540 Query: 531 DQNLILFFHDRLKL----------------------------------------YLHDR- 549 Q + F +L + HDR Sbjct: 541 MQRKLREFEAKLAAENSGDVDGEQDVDNALANYEKEIRAEAEASCGPVLADLLSFFHDRF 600 Query: 550 -------DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 R+D I+A+L PE DNLL + ++ L F + G+ L AKR ILA Sbjct: 601 KVHLKEEGARYDAIDAVLTPEADNLLLVARRLEALIVFINEVDGKNLLAGAKRAANILAA 660 Query: 603 EEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIE 662 EEKK +++ + P L EK L+ ++ + E++ + ++ L + P++ Sbjct: 661 EEKKGTKVADRVDPALLREAEEKALFDAVTLASREVGEAIAREDFNGAMLALAKLRGPVD 720 Query: 663 IFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 IFFD+VLVN +D VR NRL+LL I+ V + KI Sbjct: 721 IFFDKVLVNDEDGNVRANRLALLDQIRAATGKVADFSKIA 760 >gi|82545927|ref|YP_409874.1| glycyl-tRNA synthetase subunit beta [Shigella boydii Sb227] gi|123558352|sp|Q31V62|SYGB_SHIBS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81247338|gb|ABB68046.1| glycine tRNA synthetase, beta subunit [Shigella boydii Sb227] gi|332089349|gb|EGI94453.1| glycyl-tRNA synthetase beta subunit [Shigella boydii 3594-74] Length = 689 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 338/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + E + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYACHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|317494687|ref|ZP_07953099.1| glycyl-tRNA synthetase beta subunit protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917289|gb|EFV38636.1| glycyl-tRNA synthetase beta subunit protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 689 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 340/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + L Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNADLAHGEVTWYAAPRRLALKVAALHES 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QPDREIEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERLTSD--KGEWLLFRAHQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L T+V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQQLLPTLVTNALGKLPIPKLMRWGNNDT-----QFVRPVHTVTLLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I + IP + GHRF + + D Y + L E V+ D E R+ I D+ + Sbjct: 173 IPATILGIPSDRVIRGHRFMGEPQFTIDNADQYPQILMERGKVIADYETRKAIIKRDSEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGIADMSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ +RI L IA+ I ADV L RA Sbjct: 340 --------QRLEDNLPRLET--VLFQQQLGTLRDKTNRIEALSGWIAEQIGADVNLATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA EN A+ E +PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGENEEVAVALNEQYQPRFAGDALPESLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L E+ Sbjct: 450 CSVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLVTLTEEAAR 509 Query: 535 I---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + + D I+A+L +K ++ Sbjct: 510 LYGQKLTNANVVDDVVDFMLGRFRAWYQEEGHSVDTIQAVLARRPTKPADFDARMKAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLPEAAALAAANKRVSNILA---KSTEVLADRVHASVLKEAAEIKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ EP++ FF+QV+V +D +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFAEGRYQEALSELAALREPVDDFFEQVMVMAEDEQVRINRLTLLSKLRDLFLQVADIS 686 >gi|290511859|ref|ZP_06551227.1| glycyl-tRNA synthetase, beta subunit [Klebsiella sp. 1_1_55] gi|289775649|gb|EFD83649.1| glycyl-tRNA synthetase, beta subunit [Klebsiella sp. 1_1_55] Length = 689 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSENTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAAAQADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMIASSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + IP + GHRF + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIPSDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGQADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLMTLTA 505 Query: 531 DQNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F +R + + D D I ++L + +K Sbjct: 506 EAIRLYGDKLTNPNTLDDVETFMLNRFRAWYQDMGFSIDTILSVLELRPTMPVDFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F S + KR+ IL+ K+ ++ + P L AE+ L ++ Sbjct: 566 AVTYFRSQPDAASLAAANKRVSNILS---KRVDVLNDSVHPALLTERAEQELAFKLAVVR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 I+ + +Y L ++ EP++ FF+ V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 DRIKPLCQNLQYQDALIELAALREPVDEFFENVMVNAEDKDVRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|82779378|ref|YP_405727.1| glycyl-tRNA synthetase subunit beta [Shigella dysenteriae Sd197] gi|123560982|sp|Q328L9|SYGB_SHIDS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81243526|gb|ABB64236.1| glycine tRNA synthetase, beta subunit [Shigella dysenteriae Sd197] Length = 689 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFAIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKD-QQQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQLQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + +S ++ L E +L + Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|16762654|ref|NP_458271.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144141|ref|NP_807483.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213163579|ref|ZP_03349289.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428105|ref|ZP_03360855.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580726|ref|ZP_03362552.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609113|ref|ZP_03368939.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213649464|ref|ZP_03379517.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213854638|ref|ZP_03382878.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25009331|sp|Q8Z2B3|SYGB_SALTI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|25293205|pir||AI0980 glycine-tRNA ligase (EC 6.1.1.14) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16504960|emb|CAD07973.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29139778|gb|AAO71343.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 689 Score = 799 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAYVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y L E V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNASVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|167549108|ref|ZP_02342867.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325814|gb|EDZ13653.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 689 Score = 799 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|168465046|ref|ZP_02698938.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818524|ref|ZP_02830524.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|195632214|gb|EDX50698.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205344573|gb|EDZ31337.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088072|emb|CBY97834.1| Glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 689 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|168232493|ref|ZP_02657551.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468955|ref|ZP_03074939.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455319|gb|EDX44158.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333256|gb|EDZ20020.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 689 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|157149175|ref|YP_001456493.1| glycyl-tRNA synthetase subunit beta [Citrobacter koseri ATCC BAA-895] gi|166227911|sp|A8ARE4|SYGB_CITK8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157086380|gb|ABV16058.1| hypothetical protein CKO_05015 [Citrobacter koseri ATCC BAA-895] Length = 689 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 342/724 (47%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAASQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF I + + D Y + LE V+ D E R+ I Sbjct: 169 GDKLIPATILGIQSDRVIRGHRFMGEPEITIDTADQYPQILLERGKVVADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARQIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYAADGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLKTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KSDEVLNDRVNAATLKEPEEIALALQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + EP++ FF++V+V VDD+++R NRLS+L ++ + L V Sbjct: 623 DKLEPVFAEGRYQEALVELAELREPVDTFFEKVMVMVDDKDLRINRLSMLAKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|242237521|ref|YP_002985702.1| glycyl-tRNA synthetase subunit beta [Dickeya dadantii Ech703] gi|242129578|gb|ACS83880.1| glycyl-tRNA synthetase, beta subunit [Dickeya dadantii Ech703] Length = 689 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ YQ++ + P RL L + G Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDTAGLGYQSVNWFAAPRRLALKVAG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAAGHPTKAAEGWARGCGITVSQAERLTTD--KGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPGMVSAALAKLPIPKLMRWGDNDT-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ + I GHRF + + D Y + LE VL D E R+ I Sbjct: 169 GDELVPGTVLGIDSARTLRGHRFMGEPEFTIDNADQYPQILLERGKVLADYEARKAQIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARNIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI L +A I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGTLRDKTDRIAALAGWVAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E ++ + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKRLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAAALAAANKRVSNILA---KSTETLNDGVQAALLKENEEIQLATYVTALT 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + RY + L + E ++ FFD+V+VN +D++VR NRL+LL ++N+ L V Sbjct: 623 SKLAPWFAEGRYQEALVELAQLRESVDNFFDKVMVNAEDQQVRINRLTLLNELRNLFLKV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|168235257|ref|ZP_02660315.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736702|ref|YP_002116587.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238689772|sp|B4TZ49|SYGB_SALSV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|194712204|gb|ACF91425.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291494|gb|EDY30846.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 689 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|312968099|ref|ZP_07782310.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 2362-75] gi|312287358|gb|EFR15267.1| glycyl-tRNA synthetase beta subunit [Escherichia coli 2362-75] Length = 682 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 205/716 (28%), Positives = 334/716 (46%), Gaps = 61/716 (8%) Query: 7 EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK 66 EI +EE+P + AE + L G+ + ++ + P RL L + L+ P++ Sbjct: 2 EIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDR 61 Query: 67 IEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 62 EIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVKGES 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 E +L +V ++ K+P PK MRW + ++RP+ ++ +L +K+I Sbjct: 120 TEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL-----GDKVIPAT 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASA 238 + I + GHRF + + D Y L E V+ D E R+ I DA A Sbjct: 170 ILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARK 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G Sbjct: 230 IGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGK 289 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 290 LLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK---------------- 332 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +LS Sbjct: 333 ----KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLS 386 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ ++ Sbjct: 387 KCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALA 446 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------ 532 +ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 447 IADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGD 506 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++I F R + + D D I+A+L +K ++ F + Sbjct: 507 KLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTL 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 567 EAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFA 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 624 EGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADIS 679 >gi|198244903|ref|YP_002217613.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205354738|ref|YP_002228539.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858892|ref|YP_002245543.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690327|sp|B5FLC9|SYGB_SALDC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690461|sp|B5R4P2|SYGB_SALEP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690542|sp|B5RGM2|SYGB_SALG2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197939419|gb|ACH76752.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205274519|emb|CAR39556.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710695|emb|CAR35056.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326625398|gb|EGE31743.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629878|gb|EGE36221.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 689 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLSVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|167854811|ref|ZP_02477589.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis 29755] gi|167854109|gb|EDS25345.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis 29755] Length = 689 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 347/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATS 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLIHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ A+ K+P PK+MRW ++RP+ ++ +L +++ Sbjct: 123 EGQPTKNLLVGIISQALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++ D Y L E+ V+ D R+ IL A Sbjct: 173 IEGEILGVASGTTVRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSAK 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISSEIDRTLLVEAEEKALAEQVITLQAELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEDPKLRQNRQAILNNLRNLFLQVADIS 686 >gi|319775140|ref|YP_004137628.1| glycine tRNA synthetase subunit beta [Haemophilus influenzae F3047] gi|329122944|ref|ZP_08251515.1| glycyl-tRNA synthetase beta subunit [Haemophilus aegyptius ATCC 11116] gi|317449731|emb|CBY85938.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae F3047] gi|327471875|gb|EGF17315.1| glycyl-tRNA synthetase beta subunit [Haemophilus aegyptius ATCC 11116] Length = 688 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 347/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++ +L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIEVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTV----CVEQAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|238910311|ref|ZP_04654148.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 689 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 338/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE ++ L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAVNFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYDDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|240948882|ref|ZP_04753238.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor NM305] gi|240296697|gb|EER47308.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor NM305] Length = 689 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 347/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATS 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L ++ A+ K+P PK+MRW ++RP+ ++ +L +++ Sbjct: 123 EGQPTKNLLVGMISNALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ I G GHRF ++ D Y L E+ V+ D R+ IL A Sbjct: 173 IEGEILGIASGTTIRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KEGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSAK 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISSEIDRTLLVEAEEKALAEQVITLQAELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEDPKLRQNRQAILNNLRNLFLQVADIS 686 >gi|307133195|ref|YP_003885211.1| glycine tRNA synthetase, subunit beta [Dickeya dadantii 3937] gi|306530724|gb|ADN00655.1| glycine tRNA synthetase, beta subunit [Dickeya dadantii 3937] Length = 689 Score = 797 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 210/724 (29%), Positives = 341/724 (47%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ YQ++ + P RL L + G Sbjct: 1 MTDKTFLVEIGTEELPPKALRTLAESFAANFTAELDAAGLGYQSVNWFAAPRRLALKVAG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERLTTD--KGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK M W + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPGMVSTALAKLPIPKLMHWGDKET-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ + I GHRF + + D Y + LE VL D E R+ I Sbjct: 169 GDELVPGTVLGIDSARTIRGHRFMGEPEFTIDNADQYPQILLERGKVLADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEDAARNIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGKLMPNFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI L +A+ I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGTLRDKTDRIAALAGWVAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA +E A+ E +PR +++P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDSEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E ++ + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKRLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLTNVNVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + E + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAEALAAANKRVSNILA---KSTETLNDSVQAALLKENEEIQLATYVTALT 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + RY + L + EP++ FFD+V+VN DD++VR NRL+LL ++N+ L V Sbjct: 623 SKLAPWFAEGRYQEALGELAQLREPVDNFFDKVMVNADDQQVRINRLTLLNELRNLFLKV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|309751409|gb|ADO81393.1| Glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae R2866] Length = 688 Score = 797 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 211/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLCEKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGRLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F K+GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQKLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRMPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|327395920|dbj|BAK13342.1| glycyl-tRNA synthetase beta chain GlyS [Pantoea ananatis AJ13355] Length = 689 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 204/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + + L + + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAEAFAAQVTAELDAANLNHGEVSWFAAPRRLALKIAS 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LSASQPDREVEKRGPAVAAAFDAEGNATKAAEGWARGNGITVEQAERLSTD--KGEWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPGMVATALSKLPVPKLMRWGDSD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 +++I + I + GHRF I +++ D Y LE+ V+ D + R+ I Sbjct: 169 GDELIPATILGIKSDRVIRGHRFMGESEITLENADQYPDVLEKRGQVIADYQVRKAMIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARRLGGVADLSDSLLEEVTSLVEWPVVLTATFEEKFLKVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 EG L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDAEGNLLPNFIFVTNIESSDP-QQIISGNEKVVRPRLADAEFFFDTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQKELGSLRDKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGSKLSNANAVNDVIDFMLGRFRSWYQEEGHSIDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLDEAAALAAANKRVSNILA---KSTEPLNDSVQASLLKENEEIQLATFVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +D VR NRL+LL ++ + L V Sbjct: 623 SKLQPYFAEGRYQDALIELAQLREAVDNFFDKVMVNAEDEAVRINRLTLLSKLRGLFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|238754024|ref|ZP_04615383.1| Glycyl-tRNA synthetase beta subunit [Yersinia ruckeri ATCC 29473] gi|238707776|gb|EEQ00135.1| Glycyl-tRNA synthetase beta subunit [Yersinia ruckeri ATCC 29473] Length = 689 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 334/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + + L + + ++ + P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANITAELDSANLSHGDVSWFAAPRRLAVKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVDQAERLATD--KGEWLLYRAHI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 IGQSAQLLLAGMVSTALSKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + S + Y + LE V+ D E R++ I DA Sbjct: 173 IPGTVLGIHSNRVIRGHRFMGEAEFTIDSAEQYPQILLERGKVIADYELRKSIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGNLMPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L +A+ I ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAEQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +N+P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDNLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA+LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRASLGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + + D I+A+L +K ++ Sbjct: 510 LYGSKLTNGKVVDEVVEFMLGRFRAWYQEEGHSVDTIQAVLARRPTKPADFDARVKAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ ++ L AE +L + + Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDRVNAAVLKDSAELQLATHLVVLRDQLT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PLFAEGRYQEALVELATLRENVDAFFDNVMVMAEDDAVRINRLTLLSKLRELFLQVADIS 686 >gi|317046302|ref|YP_004113950.1| glycyl-tRNA synthetase subunit beta [Pantoea sp. At-9b] gi|316947919|gb|ADU67394.1| glycyl-tRNA synthetase, beta subunit [Pantoea sp. At-9b] Length = 689 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAEAFAAQVTAELDAAGLAHGEVNWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LAAAQPDREVEKRGPAIAAAFDANGNATKAAEGWARGNGITVDQAERLSTD--KGEWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L ++ A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGESAQTLLPAMIATALSKLPIPKLMRWGASD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILN 230 +++I + I + GHRF I + D Y + L E V+ D R+ I Sbjct: 169 GDELIPATILGIQSDRVIRGHRFMGEPEITLDHADQYPQLLLERGKVVADYAARKAQIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA + A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEQAALKLGGNADLSDSLLEEVTSLVEWPVVLTATFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQKELGTLRDKTDRIQALAGWIAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGSKLSNGNVVDDVIDFMLGRFRTWYQEEGHSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEAATTLAAANKRVSNILA---KSTETLNDSVQASLLKENEEIQLATFVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN DD+ VR NRL+LL ++ + L V Sbjct: 623 SKLQPYFAEGRYQDALIELAQLRESVDNFFDKVMVNADDQAVRINRLTLLAQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|146223|gb|AAA23915.1| glycyl-tRNA synthetase beta subunit [Escherichia coli] Length = 689 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 207/721 (28%), Positives = 338/721 (46%), Gaps = 61/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P + AE + L G+ + ++ + P RL L + L+ Sbjct: 4 KTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 64 AQPDREIEKRGPAIAQAFDAEGKPSKAPEGWARGCGITVDQAERLTTD--KGEWLLYRAH 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 E +L +V ++ K+P PK MRW SA +++RP+ ++ +L +K Sbjct: 122 VKGESTEALLPNMVATSLAKLPIPKLMRWGA-----SAAAFVRPVHTVTLLL-----GDK 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAH 233 +I + I + GHRF + + D Y L + V+ D E R+ I DA Sbjct: 172 VIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRDGGKVIADYEERKAKIKADAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 EAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 292 ANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK----------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 K + + RL V+F ++GT ++ RI+ L IA+ I ADV R Sbjct: 340 ---------KRDEDNLPRLQT--VLFQQQLGTVRDKTDRIQALAGWIAEQIGADVNHATR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 449 ACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++I F R + + D D I+A+L +K ++ Sbjct: 509 RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + KR+ ILA K + +S ++ L E +L + + Sbjct: 569 HFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 626 EPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADI 685 Query: 699 Q 699 Sbjct: 686 S 686 >gi|16766940|ref|NP_462555.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161616719|ref|YP_001590684.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167990886|ref|ZP_02571985.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168241824|ref|ZP_02666756.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260601|ref|ZP_02682574.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194443562|ref|YP_002042901.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448924|ref|YP_002047683.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197264551|ref|ZP_03164625.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|25009333|sp|Q8ZL96|SYGB_SALTY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189082272|sp|A9MUU1|SYGB_SALPB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690224|sp|B4T945|SYGB_SALHS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238693534|sp|B4SWK1|SYGB_SALNS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|16422219|gb|AAL22514.1| glycine tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161366083|gb|ABX69851.1| hypothetical protein SPAB_04538 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402225|gb|ACF62447.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407228|gb|ACF67447.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197242806|gb|EDY25426.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330783|gb|EDZ17547.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339005|gb|EDZ25769.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205350246|gb|EDZ36877.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261248804|emb|CBG26657.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995905|gb|ACY90790.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160191|emb|CBW19713.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914681|dbj|BAJ38655.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226709|gb|EFX51759.1| Glycyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132015|gb|ADX19445.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990505|gb|AEF09488.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 689 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|307941588|ref|ZP_07656943.1| glycyl-tRNA synthetase, beta subunit [Roseibium sp. TrichSKD4] gi|307775196|gb|EFO34402.1| glycyl-tRNA synthetase, beta subunit [Roseibium sp. TrichSKD4] Length = 697 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 307/723 (42%), Positives = 432/723 (59%), Gaps = 48/723 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE +SEEIPARMQ +AAEDL ++ L + G+ Y+ + Y+TP RL L++ G+ Sbjct: 1 MPDLLLEFFSEEIPARMQRRAAEDLKSLVTNALVDAGLPYEGAKAYFTPRRLALHVAGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA++GFLR GL +I + ++ DPKKGD Y+AV+ KP R Sbjct: 61 AGSAATREERKGPRVGAPEKAVEGFLRGAGLSSIDEVSVQTDPKKGDFYVAVIEKPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D++ +P ++ PWPKSM+W + + W+RPL SI+ E + +II+ ++ Sbjct: 121 KDIIAGFMPGIVRNFPWPKSMKWGSG-----SMRWVRPLHSIIATFGPETEEPEIIEFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF + V+ +D Y LE+ V+LD + R++ ILNDA A A+G Sbjct: 176 DGITSGNTTRGHRFLGDEVLTVRRMDDYAAQLEKHKVVLDADRRKDIILNDAKDRALALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 LELVED LLEE+ GLVEW V GSFD+K+L +P+E RLTI+ NQKCFV + + G L Sbjct: 236 LELVEDLGLLEEVAGLVEWPVVLTGSFDEKFLEIPDECTRLTIRVNQKCFVMKDPKTGKL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FILVSNI + D G IV GN +V+ ARL DA FW+ D Sbjct: 296 AKKFILVSNITSPDDGKLIVAGNEKVIRARLSDAWFFWETD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L + +LD +VFH K+GTQGERV R+ L ++A ++ AD RA L+K Sbjct: 337 -LKTQLADNLPKLD--SIVFHEKLGTQGERVKRLEALASELAPIVGADKDKAVRAARLAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +++V EFPELQG +G+ YA Q E+ S AIE+H +P+GP ++VPT+ +++ V+L Sbjct: 394 ADLVSQMVYEFPELQGLMGRTYASKQGEDESVAIAIEDHYRPQGPSDSVPTDPVAVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLD L FWAI+EKP+GSKDP+ALRRA LG+IRI+LENK+ +PL+Q ++ Sbjct: 454 ADKLDLLAGFWAIDEKPTGSKDPFALRRAALGVIRIVLENKLRLPLAQQLKASLYKIKPD 513 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEF 580 +L+ FF DRLK++L D RHDLI+A+ D+LL +V ++ L F Sbjct: 514 LNNEAAEELVTDLLSFFADRLKVHLKDEGARHDLIDAVFALGGQDDLLMVVKRVEALGAF 573 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 SS G KR IL EEKK+ + L +AE L A I + Sbjct: 574 VSSYDGANLAAGYKRAVNILRAEEKKDGAPVEGRPHADLLQEQAEIDLAAAIDTARAAAE 633 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ ++ + + L + P++ FF+ +LVN DD +R NRL LL I++ +V + Sbjct: 634 NAVANEDFEEAMAALSKLRAPVDKFFEDILVNADDPALRKNRLQLLAEIRDATHVVADFS 693 Query: 700 KIV 702 K+ Sbjct: 694 KVA 696 >gi|301169648|emb|CBW29249.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae 10810] Length = 688 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 347/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEMEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLEVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIEVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTV----CVEQAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|204928626|ref|ZP_03219825.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322059|gb|EDZ07257.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 689 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGQPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|301154902|emb|CBW14365.1| glycine tRNA synthetase, beta subunit [Haemophilus parainfluenzae T3T1] Length = 688 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVDQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNGIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALSEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAKGDYTAVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|56415548|ref|YP_152623.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364476|ref|YP_002144113.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821567|sp|Q5PLN2|SYGB_SALPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238690750|sp|B5BHU1|SYGB_SALPK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56129805|gb|AAV79311.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095953|emb|CAR61536.1| glycine-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 689 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVVTSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + S + Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDSAEQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|50119046|ref|YP_048213.1| glycyl-tRNA synthetase subunit beta [Pectobacterium atrosepticum SCRI1043] gi|81827262|sp|Q6DB17|SYGB_ERWCT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|49609572|emb|CAG73005.1| glycine-tRNA synthetase, beta subunit [Pectobacterium atrosepticum SCRI1043] Length = 689 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 333/724 (45%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L + + ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGDVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LSASQPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RAHAKGEQAQALLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 E++I + I GHRF + + + Y + LE V+ D + R+ I Sbjct: 169 GEELIPGQVLGIHSARTIRGHRFMGEAEFTIDNAEQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEDAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPHFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWVASQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGTKLTNTKAVDEVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ ILA K +++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILA---KSTDKLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|313647572|gb|EFS12022.1| glycyl-tRNA synthetase beta subunit [Shigella flexneri 2a str. 2457T] Length = 682 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 205/716 (28%), Positives = 334/716 (46%), Gaps = 61/716 (8%) Query: 7 EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK 66 EI +EE+P + AE + L G+ + ++ + P RL L + L+ P++ Sbjct: 2 EIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDR 61 Query: 67 IEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 62 EIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVKGES 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 E +L +V ++ K+P PK MRW + ++RP+ ++ +L +K+I Sbjct: 120 TEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL-----GDKVIPAT 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASA 238 + I + GHRF + + D Y L E V+ D E R+ I DA A Sbjct: 170 ILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARK 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G Sbjct: 230 IGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGK 289 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 290 LLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK---------------- 332 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +LS Sbjct: 333 ----KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLS 386 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ ++ Sbjct: 387 KCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALA 446 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------ 532 +ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 447 IADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGD 506 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++I F R + + D D I+A+L +K ++ F + Sbjct: 507 KLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTL 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 567 EAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFA 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 624 EGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRVADIS 679 >gi|200388817|ref|ZP_03215429.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199605915|gb|EDZ04460.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 689 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + S D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDSADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|325577405|ref|ZP_08147812.1| glycyl-tRNA synthetase beta subunit [Haemophilus parainfluenzae ATCC 33392] gi|325160634|gb|EGC72757.1| glycyl-tRNA synthetase beta subunit [Haemophilus parainfluenzae ATCC 33392] Length = 688 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 347/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVDQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R++RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLSRLET--VLFQQQLGTLKDKTDRIEKLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFADKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAKGDYTAVLDKLANLRAPVDNFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|322613960|gb|EFY10896.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620329|gb|EFY17197.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625334|gb|EFY22161.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629999|gb|EFY26772.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634189|gb|EFY30924.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635910|gb|EFY32619.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643062|gb|EFY39637.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644607|gb|EFY41143.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650849|gb|EFY47241.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652987|gb|EFY49322.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659950|gb|EFY56190.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663283|gb|EFY59487.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668769|gb|EFY64922.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674428|gb|EFY70521.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678364|gb|EFY74425.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680870|gb|EFY76904.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687194|gb|EFY83167.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192153|gb|EFZ77386.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200657|gb|EFZ85731.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201367|gb|EFZ86433.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206767|gb|EFZ91721.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211803|gb|EFZ96635.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216162|gb|EGA00890.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220385|gb|EGA04839.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226242|gb|EGA10457.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228362|gb|EGA12493.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234183|gb|EGA18271.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237168|gb|EGA21235.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244687|gb|EGA28691.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249168|gb|EGA33086.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250713|gb|EGA34593.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257588|gb|EGA41275.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262297|gb|EGA45858.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266148|gb|EGA49639.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268783|gb|EGA52241.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 689 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I I GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRIIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|161505806|ref|YP_001572919.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189082271|sp|A9MLF8|SYGB_SALAR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160867153|gb|ABX23776.1| hypothetical protein SARI_03982 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 689 Score = 795 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 204/724 (28%), Positives = 335/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGKVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDNVIPATILGIQSDRVIRGHRFMGEPEFTIDTADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI+++D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESTDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|62182160|ref|YP_218577.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|81309553|sp|Q57IG6|SYGB_SALCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|62129793|gb|AAX67496.1| glycine tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322716647|gb|EFZ08218.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 689 Score = 795 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 335/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLEHGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN ++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAKEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|291615654|ref|YP_003518396.1| GlyS [Pantoea ananatis LMG 20103] gi|291150684|gb|ADD75268.1| GlyS [Pantoea ananatis LMG 20103] Length = 689 Score = 795 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 338/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + + L + + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAEAFAAQVTAELDAANLNHGEVSWFAAPRRLALKIAS 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LSASQPDREVEKRGPAVAAAFDAEGNATKAAEGWARGNGITVEQAERLSTD--KGEWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPGMVATALSKLPVPKLMRWGDSD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 +++I + I + GHRF I +++ D Y LE+ V+ D + R+ I Sbjct: 169 GDELIPATILGIKSDRVIRGHRFMGESEITLENADQYPDVLEKRGQVIADYQVRKAMIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARRLGGVADLSDSLLEEVTSLVEWPVVLTATFEEKFLKVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDAGGNLLPNFIFVTNIESSDP-QQIISGNEKVVRPRLADAEFFFDTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQKELGSLRDKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGSKLSNANAVNDVIDFMLGRFRSWYQEEGHSIDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLDEAAALAAANKRVSNILA---KSTEPLNDSVQASLLKENEEIQLATFVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +D VR NRL+LL ++ + L V Sbjct: 623 SKLQPYFAEGRYQDALIELAQLREAVDNFFDKVMVNAEDEAVRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|224585454|ref|YP_002639253.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254781860|sp|C0Q1B6|SYGB_SALPC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|224469982|gb|ACN47812.1| glycyl-tRNA synthetase beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 689 Score = 795 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 335/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLALDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN ++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAKEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|219871686|ref|YP_002476061.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis SH0165] gi|254781852|sp|B8F711|SYGB_HAEPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219691890|gb|ACL33113.1| glycyl-tRNA synthetase subunit beta [Haemophilus parasuis SH0165] Length = 689 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 347/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ A+ K+P PK+MRW ++RP+ ++ +L +++ Sbjct: 123 EGQPTKNLLVGIISQALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++ D Y L E+ V+ D R+ IL A Sbjct: 173 IEGEILGVASGTTVRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSAK 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA E K IS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILAKVEGK---ISSEIDRTLLVEAEEKALAEQVITLQAELV 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEDPKLRQNRQAILNNLRNLFLQVADIS 686 >gi|16272861|ref|NP_439084.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae Rd KW20] gi|260580013|ref|ZP_05847843.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae RdAW] gi|1174512|sp|P43822|SYGB_HAEIN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|1573946|gb|AAC22584.1| glycyl-tRNA synthetase, beta chain (glyS) [Haemophilus influenzae Rd KW20] gi|260093297|gb|EEW77230.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae RdAW] Length = 688 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 343/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFYIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++ +L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKAGAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|261823642|ref|YP_003261748.1| glycyl-tRNA synthetase subunit beta [Pectobacterium wasabiae WPP163] gi|261607655|gb|ACX90141.1| glycyl-tRNA synthetase, beta subunit [Pectobacterium wasabiae WPP163] Length = 689 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 334/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L +++ ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLVHGDVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LNASQPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RALAKGEQAQALLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 E++I + I GHRF + S D Y + LE V+ D + R+ I Sbjct: 169 GEELIPGQVLGIHSARTIRGHRFMGEAEFTIDSADQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AMRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGTKLTNTKAVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ ILA K ++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILA---KSTDTLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|304398082|ref|ZP_07379957.1| glycyl-tRNA synthetase, beta subunit [Pantoea sp. aB] gi|304354368|gb|EFM18740.1| glycyl-tRNA synthetase, beta subunit [Pantoea sp. aB] Length = 689 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 202/724 (27%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L + + + + P RL L + Sbjct: 1 MTEQTFLVEIGTEELPPKALRSLAEAFAAQVTAELDAANLSHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LSASQPDREVEKRGPAVSAAFDADGNATKAAEGWARGNGITVDQAERLATD--KGEWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L ++ A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPAMIATALSKLPVPKLMRWGDSD-----VQFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 +++I + I + GHRF I + + D Y LE+ V+ D + R+ I Sbjct: 169 GDELIPGTILGIKSDRVIRGHRFMGESEITLDNADQYPDVLEKRGQVIADYQVRKAMIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARRLGGNADISDSLLEEVTSLVEWPVVLTATFEEKFLKVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++S+ I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNDGNLMPNFIFVTNIESSEPRQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQKELGTLRDKTDRIQALASWIAGEIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGSKLSNARVVDDVIDFMLGRFRTWYQEEGHSIDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSTETLNESVQASLLKENEEIQLATFVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + ++ FFD+V+VN DD+ VR NRL+LL ++ + L V Sbjct: 623 SKLQPYFAEGRYQDALVELAQLRTAVDNFFDKVMVNADDQAVRVNRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|261344460|ref|ZP_05972104.1| glycyl-tRNA synthetase, beta subunit [Providencia rustigianii DSM 4541] gi|282567368|gb|EFB72903.1| glycyl-tRNA synthetase, beta subunit [Providencia rustigianii DSM 4541] Length = 689 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 196/720 (27%), Positives = 339/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDGADISHGAVTWFAAPRRLALKVANLAAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAQM 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++L +V ++ K+P PK MRW+ + ++RP+ ++ +L ++ + Sbjct: 123 KGQAVSELLIDMVSRSLSKLPIPKLMRWADKET-----QFVRPVHTVTLLLGSD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ++ ++ I G GHRF + + D Y L E V+ D E R+ I D+ + Sbjct: 173 VEGEILGIKSGRTIRGHRFMGEAEFTIDNADQYPEILRERGKVIADYETRKATIKADSEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQALGGKADLTESLLEEVTSLVEWPVVLTAKFEEKFLDVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 NAGKLMPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ R+ L IA I ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQQQLGTLRDKTDRLEALSGWIASKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ +S Sbjct: 390 GLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFAGDELPSTDVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + ++ Sbjct: 450 AALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTQEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNKNVVDDVVEFMLGRFRSWYQELGYSIDAIQAVLARRPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + + KR+ IL+ K + +++ + L E +L + + Sbjct: 570 FRSLDEAQALAAANKRVSNILS---KSDEKLADSVLASVLKTPEEVKLATHLVVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L S+ E ++ FF V+V +D VR+NRL+LL ++ + L V ++ Sbjct: 627 PMFAERNYQEALVELASLREVVDEFFANVMVMDEDPAVRNNRLTLLSQLRELFLKVADIS 686 >gi|197251342|ref|YP_002148583.1| glycyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238689993|sp|B5EX65|SYGB_SALA4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197215045|gb|ACH52442.1| glycyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 689 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGNVEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++K D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E ++ +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESTEALVPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +K+I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDKVIPAIILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L AE L + Sbjct: 566 AVSHFRTLEEASALAAANKRVSNILA---KATEPLNDIVHASVLKEAAEIELARHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY + L ++ P++ FF+ V+VN +++++R NRL+LL ++ + L V Sbjct: 623 DKLQPYFADGRYQEALIELAALRAPVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|271498623|ref|YP_003331648.1| glycyl-tRNA synthetase subunit beta [Dickeya dadantii Ech586] gi|270342178|gb|ACZ74943.1| glycyl-tRNA synthetase, beta subunit [Dickeya dadantii Ech586] Length = 689 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 210/724 (29%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ YQ++ + P RL L + G Sbjct: 1 MTDKTFLVEIGTEELPPKALRTLAESFAAHFTAELDAAGLGYQSVDWFAAPRRLALKVVG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAAGNPTKAAEGWARGCGITVSQAERLTTD--KGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGEAAQTLLPGMVSTALAKLPIPKLMRWGDNDT-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I + I G GHRF + + D Y + LE VL D + R+ I Sbjct: 169 GDELIPGTVLGIDSGRTLRGHRFMGEPEFTIDNADQYPQILLERGKVLADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNADKLLPNFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L +A I ADV Sbjct: 340 ------------KRLEDHLPRL--ATVLFQQQLGTLRDKTDRIAALTGWVAGQIGADVEH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + E + KR+ ILA K ++ + L + E +L ++ Sbjct: 566 AVSHFRTLEQAEALAAANKRVSNILA---KSTETLNDSVQAALLKEKEEIQLATYVTALT 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + RY + L + E ++ FFD+V+VN DD +VR NRL+LL ++N+ L V Sbjct: 623 SKLAPWFAEGRYQEALAELAQLRESVDNFFDKVMVNADDAQVRINRLTLLNELRNLFLKV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|253690527|ref|YP_003019717.1| glycyl-tRNA synthetase, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511928|sp|C6DII7|SYGB_PECCP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|251757105|gb|ACT15181.1| glycyl-tRNA synthetase, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 689 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 206/724 (28%), Positives = 331/724 (45%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L + + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGEVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + KA +G+ R G+ ++ D KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAEGKTTKAAEGWARGCGITVEQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L ++ A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RAHAKGEQAQALLAGMISTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I + I GHRF + S D Y + LE V+ D + R+ I Sbjct: 169 GDELIPGQVLGIHSARTLRGHRFMGEAEFTIDSADQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGAKLTNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ ILA K ++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILA---KSTDTLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|145634100|ref|ZP_01789811.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittAA] gi|145268544|gb|EDK08537.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittAA] Length = 688 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNGIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KAAALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAMPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFSDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLVLRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|148828101|ref|YP_001292854.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittGG] gi|166227915|sp|A5UI65|SYGB_HAEIG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148719343|gb|ABR00471.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittGG] Length = 688 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLAKQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L + V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGRLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I D A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGTDEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIEVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTV----CVEQAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|294638314|ref|ZP_06716567.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda ATCC 23685] gi|291088567|gb|EFE21128.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda ATCC 23685] Length = 689 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 344/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + A+ + L G+ + ++ + P RL L + L Sbjct: 5 TFLVEIGTEELPPKALRSLAQAFADNFRSELDNAGLAHGDIAWFAAPRRLALKVAALDAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L ++ Sbjct: 65 QPDREIEKRGPAIAQAFDADGKPTKAAEGWARGCGISVEQAERLTTD--KGEWLLYRAQQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L T+V A+ ++P PK MRW + ++RP+ ++ +L +E Sbjct: 123 KGQRAQELLPTLVANALSRLPIPKLMRWGANDT-----QFVRPVHTVTLLLGSES----- 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEARKAQIKRDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAARIGGQADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V+N+ + D I+ GN +VV RL DA F+K D+ Sbjct: 293 AQGKLLPNFIFVANVDSKDA-QQIIAGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++G+ ++ RI L IAQ I ADV + RA Sbjct: 340 --------QRLEDNLPRLE--SVLFQQQLGSLRDKTDRIAALAGWIAQQIGADVNMATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E ++ E PR + +P++ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVSLNEQYMPRFAGDALPSSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L ++ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLLTLTQEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + + D I+A+L ++ ++ Sbjct: 510 LYGDKLSNAKVVEDVVDFMLGRFRAWYQEEGHAVDTIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K + ++ ++ L AE RL A + + Sbjct: 570 FRTLDEAATLAAANKRVSNILA---KSSDTLADQVQATLLKEAAEIRLAANLITLQEKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ +P++ FF+QV+V DD +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFAAGQYQEALVELATLRQPVDDFFEQVMVMADDEQVRINRLTLLSKLRDLFLQVADIS 686 >gi|22127958|ref|NP_671381.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis KIM 10] gi|45443705|ref|NP_995244.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|51598201|ref|YP_072392.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis IP 32953] gi|108809003|ref|YP_652919.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Antiqua] gi|108813877|ref|YP_649644.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Nepal516] gi|145597347|ref|YP_001161422.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Pestoides F] gi|150260990|ref|ZP_01917718.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis CA88-4125] gi|153949017|ref|YP_001403073.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis IP 31758] gi|162420121|ref|YP_001608092.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis Angola] gi|165926203|ref|ZP_02222035.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165936828|ref|ZP_02225394.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166009645|ref|ZP_02230543.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213303|ref|ZP_02239338.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167398625|ref|ZP_02304149.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420827|ref|ZP_02312580.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425595|ref|ZP_02317348.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167467917|ref|ZP_02332621.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis FV-1] gi|170022285|ref|YP_001718790.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis YPIII] gi|186897425|ref|YP_001874537.1| glycyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis PB1/+] gi|218931052|ref|YP_002348927.1| glycyl-tRNA synthetase subunit beta [Yersinia pestis CO92] gi|229839779|ref|ZP_04459938.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841863|ref|ZP_04462019.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229896741|ref|ZP_04511905.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Pestoides A] gi|229904400|ref|ZP_04519511.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Nepal516] gi|270488339|ref|ZP_06205413.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis KIM D27] gi|294505601|ref|YP_003569663.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Z176003] gi|25009332|sp|Q8Z9W7|SYGB_YERPE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81825680|sp|Q663V8|SYGB_YERPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|122979893|sp|Q1CD86|SYGB_YERPN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|123372145|sp|Q1C3J8|SYGB_YERPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166227933|sp|A4TGN7|SYGB_YERPP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166980042|sp|A7FP95|SYGB_YERP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238687308|sp|A9R4F9|SYGB_YERPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238688395|sp|B1JH07|SYGB_YERPY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238691425|sp|B2K7F8|SYGB_YERPB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|21961101|gb|AAM87632.1|AE014010_8 glycine tRNA synthetase, beta subunit [Yersinia pestis KIM 10] gi|45438575|gb|AAS64121.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis biovar Microtus str. 91001] gi|51591483|emb|CAH23154.1| glycyl-tRNA synthetase beta subunit [Yersinia pseudotuberculosis IP 32953] gi|108777525|gb|ABG20044.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Nepal516] gi|108780916|gb|ABG14974.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Antiqua] gi|115349663|emb|CAL22643.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis CO92] gi|145209043|gb|ABP38450.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Pestoides F] gi|149290398|gb|EDM40475.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis CA88-4125] gi|152960512|gb|ABS47973.1| glycyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis IP 31758] gi|162352936|gb|ABX86884.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis Angola] gi|165915070|gb|EDR33681.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922063|gb|EDR39240.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165991567|gb|EDR43868.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205601|gb|EDR50081.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960956|gb|EDR56977.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051129|gb|EDR62537.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055609|gb|EDR65402.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169748819|gb|ACA66337.1| glycyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis YPIII] gi|186700451|gb|ACC91080.1| glycyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis PB1/+] gi|229678518|gb|EEO74623.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Nepal516] gi|229691202|gb|EEO83255.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229696145|gb|EEO86192.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700280|gb|EEO88315.1| glycine tRNA synthetase, beta subunit [Yersinia pestis Pestoides A] gi|262363765|gb|ACY60486.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis D106004] gi|262367701|gb|ACY64258.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis D182038] gi|270336843|gb|EFA47620.1| glycyl-tRNA synthetase, beta subunit [Yersinia pestis KIM D27] gi|294356060|gb|ADE66401.1| glycyl-tRNA synthetase beta subunit [Yersinia pestis Z176003] gi|320017401|gb|ADW00973.1| glycine tRNA synthetase, beta subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 689 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 203/720 (28%), Positives = 330/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANLSHGEVSWYAAPRRLAVKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L E + Sbjct: 123 KGQPAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGTE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + S D Y + LE V+ D E R++ I DA + Sbjct: 173 IPGTVLGINSDRVIRGHRFMGEAEFTIDSADQYPQILLERGKVIADYELRKSIIKRDAEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQQIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 TAGHLMPHFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLSLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNAKVVDDVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVHASILKEPAELKLATHLVVLRDQLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYKEALVELAALRETVDEFFESVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|257465118|ref|ZP_05629489.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor 202] gi|257450778|gb|EEV24821.1| glycyl-tRNA synthetase subunit beta [Actinobacillus minor 202] Length = 689 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 348/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEAELNQAGLSFDKVEWFAAPRRLAVKVLGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ A+ K+P PK+MRW ++RP+ ++ +L +++ Sbjct: 123 EGQPTKNLLVGIISQALAKLPIPKTMRWGDKTE-----QFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++ D Y L E+ V+ D R+ IL A Sbjct: 173 IEGEILGVASGTTVRGHRFLGEREFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D +AI++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDP-SAIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLKT--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I ++P GS DP+ALRRA LG +RII+E + + LS + Sbjct: 450 SSVALADKFDTLTGIFGIGQQPKGSADPFALRRAALGALRIIVEKNLPLDLSDLVATSAK 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNSNVVEEVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISSEIDRTLLVEAEEKALAEQVIALQAELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y D L + E ++ FFD+V+VN ++ ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFEKGEYQTALDRLAGLREVVDNFFDKVMVNAEEPKLRQNRQAILNNLRNLFLQVADIS 686 >gi|227115350|ref|ZP_03829006.1| glycyl-tRNA synthetase subunit beta [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 689 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 333/724 (45%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L + + ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGDVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LSASQPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RAHAKGEQAQTLLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 E++I + I GHRF + + + Y + LE V+ D + R+ I Sbjct: 169 GEELIPGQVLGIDSARTLRGHRFMGEAEFTIDNAEQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWVAGQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLSNAKVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ ILA K ++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILA---KSTDTLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|148826424|ref|YP_001291177.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittEE] gi|229845983|ref|ZP_04466095.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 7P49H1] gi|166227914|sp|A5UDE3|SYGB_HAEIE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148716584|gb|ABQ98794.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittEE] gi|229810987|gb|EEP46704.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 7P49H1] gi|309973574|gb|ADO96775.1| Glycyl-tRNA synthetase, beta subunit [Haemophilus influenzae R2846] Length = 688 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELIQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHCAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFSDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLVLRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|283787796|ref|YP_003367661.1| glycine-tRNA synthetase, beta subunit [Citrobacter rodentium ICC168] gi|282951250|emb|CBG90944.1| glycine-tRNA synthetase, beta subunit [Citrobacter rodentium ICC168] Length = 689 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 339/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + N+ + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGNVEWFAAPRRLALKVAK 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G++R G+ ++ D KG+ L Sbjct: 61 LAESQPDREVEKRGPAIAQAFDAEGKPSKAAEGWVRGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L +V ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPNMVAASLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDNVIPATILGIQSDRVIRGHRFMGEPQFTIDNADQYPQILLERGKVIADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAIEAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D IV GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIVSGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI+ L IA ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAGQTGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAARLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + EP++ FF++V+VNV+D+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPFFAEGRYQEALVELAELREPVDAFFEKVMVNVEDKELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|311277514|ref|YP_003939745.1| glycyl-tRNA synthetase, beta subunit [Enterobacter cloacae SCF1] gi|308746709|gb|ADO46461.1| glycyl-tRNA synthetase, beta subunit [Enterobacter cloacae SCF1] Length = 689 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 211/724 (29%), Positives = 334/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDSAGLAHGGVEWFAAPRRLALKVAA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAESQPDREVEKRGPAVAQAFDASGHPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E Sbjct: 119 RAHVKGESAQALLPNMVATALAKLPIPKLMRWGASD-----VHFVRPVHTVTMLLGSE-- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +I + I + GHRF + D Y + LE V+ D E R+ I Sbjct: 172 ---VIPATILGIASDRVIRGHRFMGEPEFTIDHADQYPQILLERGKVIADYEQRKATIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLKVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI + D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDAAGKLLPNFIFVANIVSKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RLD V+F ++GT ++ RI L IA+ I ADV Sbjct: 340 ------------KRLEDHLPRLDT--VLFQQQLGTLRDKTDRIEALSGWIARQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGIMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NLVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLSLDLQSLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGEKLTNASVVDDVIDFMLGRFRAWYQDEGYAVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + KR+ ILA K + ++ ++ L E L I Sbjct: 566 AVTYFRTLDAASALAAANKRVSNILA---KSDEVLNERVNAATLKDPEEVALALQIVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + EP++ FF++V+V VDD+E+R NRLS+L+ ++ + L V Sbjct: 623 DKLEPYFAQGRYQEALVELAELREPVDAFFEKVMVMVDDKELRINRLSMLEKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|308188778|ref|YP_003932909.1| glycyl-tRNA synthetase, beta subunit [Pantoea vagans C9-1] gi|308059288|gb|ADO11460.1| Glycyl-tRNA synthetase, beta subunit [Pantoea vagans C9-1] Length = 689 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 202/724 (27%), Positives = 337/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + + + + + + P RL L + Sbjct: 1 MTEQTFLVEIGTEELPPKALRSLAEAFAAQVTAEMDAANLSHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LSASQPDREVEKRGPAVAAAFDADGNATKAAEGWARGNGITVDQAERLATD--KGEWLVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L ++ A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQALLPAMIATALSKLPVPKLMRWGDSD-----VQFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 +++I + I + GHRF I + + D Y LE+ V+ D + R+ I Sbjct: 169 GDELIPGTILGIKSDRVIRGHRFMGESEITLDNADQYPDVLEKRGQVIADYQVRKAMIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAARRLGGNADISDSLLEEVTSLVEWPVVLTATFEEKFLKVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNDGNLMPNFIFVTNIESSDPRQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDNLPRLET--VLFQKELGTLRDKTDRIQTLAGWIAGEIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGSKLSNARVVDDVIDFMLGRFRTWYQEEGHSIDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEAAAALAAANKRVSNILA---KSTETLNESVQASLLKENEEIQLATFVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + ++ FFD+V+VN DD+ VR NRL+LL ++ + L V Sbjct: 623 SKLQPYFAEGRYQDALVELAQLRTAVDNFFDKVMVNADDQAVRVNRLTLLSKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|145630016|ref|ZP_01785798.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae R3021] gi|144984297|gb|EDJ91720.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae R3021] Length = 688 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|52426011|ref|YP_089148.1| glycyl-tRNA synthetase subunit beta [Mannheimia succiniciproducens MBEL55E] gi|81825482|sp|Q65R47|SYGB_MANSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|52308063|gb|AAU38563.1| GlyS protein [Mannheimia succiniciproducens MBEL55E] Length = 689 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 348/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ ++ + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLTFEKVQWFAAPRRLAVKVLNLATS 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPTKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERLATD--KGEWLVHRATI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++++ IV ++ +P PK MRW ++RP+ ++ +L E + Sbjct: 123 EGQPTKNLMLDIVTRSLANLPIPKMMRWGDKTE-----QFVRPVHTVSLLLGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ ++ I G GHRF ++ D Y + L+ + V+ D RR IL D+ Sbjct: 173 IEGEILGIASGRTIRGHRFLGEAEFQIAHADEYPQILKDKGSVIADFNERRAIILADSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ASA+G + DLL+E+ LVE+ V +F++++L +P E + T+K +QK F Sbjct: 233 KASALGGVADIEDDLLDEVTSLVEFPNVLTATFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI VSNI +D I++GN +VV RL DA F+ D+ Sbjct: 293 KNGKLLPHFIFVSNINPTDPTP-IIEGNEKVVRPRLSDAEFFFNTDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L +IA I AD A +RA Sbjct: 340 --------QRLEDLLPRLET--VLFQQQLGTLLDKTKRIQALAGEIATQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L++ ++ Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLAEIVKKSTA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFADRLTNQNVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS +I LL EK L + + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KIEGEISSKIDRTLLLEPEEKALAEQVLALQSELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y D L + E I+ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PLFAKGEYQPALDRLAGLREVIDNFFDKVMVNAEDEKLRQNRQAILNTLRNLFLQVADIS 686 >gi|123444319|ref|YP_001008285.1| glycyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166227932|sp|A1JT50|SYGB_YERE8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|122091280|emb|CAL14166.1| glycyl-tRNA synthetase beta subunit [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 689 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 329/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + Y + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELNNANLPYGEVIWYAAPRRLALKVTNLSAT 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKDT-----QFVRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I + I I GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRIIRGHRFMGEPEFTLDNADQYPQVLQERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 TAGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K +++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDKLNDHVRASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFESVMVMDEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|260581758|ref|ZP_05849555.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae NT127] gi|260095351|gb|EEW79242.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae NT127] Length = 688 Score = 794 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEMEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L + V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G +++LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEENLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLLRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKAGAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRAPVDNFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|288959118|ref|YP_003449459.1| glycyl-tRNA synthetase beta chain [Azospirillum sp. B510] gi|288911426|dbj|BAI72915.1| glycyl-tRNA synthetase beta chain [Azospirillum sp. B510] Length = 729 Score = 793 bits (2049), Expect = 0.0, Method: Composition-based stats. Identities = 277/751 (36%), Positives = 406/751 (54%), Gaps = 83/751 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E++SEEIPARMQ KAA D +++ L G+ +Q + TP R+ L + GL Sbjct: 8 ELLVEVFSEEIPARMQAKAALDFRRLIVEKLAAAGLGFQAAVEQSTPRRIALVVNGLPDR 67 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + + EE+ GPRVG+ ++A+ GFL+S GL ++ C+ ++D KG Y AV K R + Sbjct: 68 TEDIKEEKKGPRVGSPEQAVAGFLKSAGLDSLDQCE-QRDTGKGVFYFAVTEKKGRETAE 126 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL I+P A+ ++PWPKSMRW T + W+RPL SI+ + D+ Sbjct: 127 VLAEIIPAAMAELPWPKSMRWGTGTA-----RWVRPLHSIIALFGGRVLDG---GYDIGG 178 Query: 183 ----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 I G+ T GHRF AP V+S Y L A V+LD E R+ I DA LA++ Sbjct: 179 AQGRIAFGDSTRGHRFLAPDAFTVESFADYREKLLAAKVVLDREERKAKIKADAEALAAS 238 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 GL L D LLEE+ GLVEW V MGS D+ ++ +P E++ +++T+QK F EG Sbjct: 239 QGLTLSPDDALLEEVAGLVEWPVVLMGSIDESFMDVPSEVLITSMRTHQKYFAVLDAEGR 298 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 +A CFI+V+N + DGG A+V GN RV+ ARL DA FW +D Sbjct: 299 MAPCFIVVANTETLDGGKAVVAGNERVLRARLSDAKFFWDQDHK---------------- 342 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L+ R + L+ + FHA +GT E+V+RI++L +IA++I ADV +RA L Sbjct: 343 ----TKLEDRKSSLE--KITFHANLGTVAEKVTRIQLLAAEIARIIGADVKAANRAAELC 396 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPE+QG +G+ YA Q E+ DAI +H KP GP ++ PT +S+ V+ Sbjct: 397 KADLVTEVVGEFPEVQGIMGRYYAKDQGESDDVADAIADHYKPVGPSDSCPTVPVSVAVA 456 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-- 536 LADK+DTL+ F+AI+EKP+GSKDPYALRRA LG+IR+IL N + + L+ Sbjct: 457 LADKIDTLVGFFAIDEKPTGSKDPYALRRAALGVIRLILTNDLRLRLTDITGFAFNSHYA 516 Query: 537 --------------------------------------------FFHDRLKLYLHDRDIR 552 FF DRLK+ L ++ +R Sbjct: 517 QGRIIEHEPEATGSKSLQKFGKALESIPSRREVWSDWTTDGLMSFFADRLKVVLREQGVR 576 Query: 553 HDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EI 610 HDL++A+ D+L+ ++ +K L F S +G L + KR I+ IEEKK+ Sbjct: 577 HDLVDAVFALGGEDDLVRLLARVKALQAFVGSEEGANLLAAYKRASNIVRIEEKKDGISF 636 Query: 611 SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 + L + E L A ++ + +D + + L ++ P++ FFD+V V Sbjct: 637 DQPVDAARLAQDEETALSAALNGASATAKPLLDAEDFTGTMAALANLRGPVDAFFDKVTV 696 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 N +D+++R NRL LL I+ + V + KI Sbjct: 697 NAEDKDLRANRLRLLTQIRTTLNAVADFSKI 727 >gi|323139039|ref|ZP_08074098.1| glycyl-tRNA synthetase, beta subunit [Methylocystis sp. ATCC 49242] gi|322395699|gb|EFX98241.1| glycyl-tRNA synthetase, beta subunit [Methylocystis sp. ATCC 49242] Length = 725 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 314/742 (42%), Positives = 426/742 (57%), Gaps = 63/742 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+DL ++ L E G+ Y+ Y TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQRQAADDLRRLVTNALVERGLTYEGASAYATPRRLALQVVGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EER GPRVGA AI GFL+S GL ++ +I+KD K + YLAV+ +P Sbjct: 61 GRQPDVREERKGPRVGAPDAAIQGFLKSAGLASLDQARIEKDKKGAEFYLAVIERPGAET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL I+P ++ PWPKSMRW + W+RPL SI+ E ++ ++ Sbjct: 121 IQVLAEILPGIVKGFPWPKSMRWGAASERTDSLRWVRPLHSIVATFGPETETPDVVPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T+GHRF AP I V+ + Y LE A V++DPE RR+ IL+DA LA A G Sbjct: 181 DGIIAGNTTHGHRFMAPAAIHVKRFEDYAMSLERARVVIDPERRRDIILHDAKDLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LLEE+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV R ++G L Sbjct: 241 LELVEDAGLLEEVAGLVEWPVTLMGSFDESFLSIPPEVIRATIRVNQKCFVLR-KDGKLT 299 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILVSNI+ASD GA IV GN RV+AARL DA F++ D Sbjct: 300 NRFILVSNIEASDHGATIVAGNQRVIAARLSDAKFFYETD-------------------- 339 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L L+ R+ +LD +VFH K+GTQGERV RI L +++A ++ AD RA L KA Sbjct: 340 LKTKLEDRLPKLD--QIVFHEKLGTQGERVKRIAALARELAPIVGADPDKAARAATLCKA 397 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA Q E+ S +A EH KP+G + P + +SI V+LA Sbjct: 398 DLVSEMVGEFPELQGLMGSYYASAQGEDPSVANACYEHYKPQGQGDYAPKDPVSIAVALA 457 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL------ 534 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRIILEN++ + + Q Sbjct: 458 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIILENELRLQALPIFDCQYNVFSFHG 517 Query: 535 ------------------ILFFHDRLKLYLHDRDIRHDLIEAIL--------------RP 562 + FF DRLK+YL D+ R+DLI+A L Sbjct: 518 KTLKETSEGMVGTSAISLLEFFIDRLKVYLRDKGARYDLIDAALGAVAFDESEEETASAA 577 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL--EISPQYLL 620 D+LL I ++ L++F ++ G+ L KR IL EEKK+ + +P + Sbjct: 578 LQDDLLMITKKVEALDKFLATDDGKNLLAGYKRAVNILKAEEKKDGPRAYYHRHAPNLRV 637 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 E +L A I+ E ++ + + L + +P++ FF+ V VN D+ ++R N Sbjct: 638 EPQEHKLAAAIARAREETTEKLEKEDFAGAMRSLAKLRDPVDAFFEHVTVNADNADLRLN 697 Query: 681 RLSLLQYIKNIILIVINVQKIV 702 RL LL ++ +++ V + KI Sbjct: 698 RLRLLAELRRVMMGVADFGKIA 719 >gi|319897585|ref|YP_004135782.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae F3031] gi|317433091|emb|CBY81465.1| glycine tRNA synthetase, beta subunit [Haemophilus influenzae F3031] Length = 688 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 347/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLHLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QLSKEIEKRGPAVSAAFDGEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++ +L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEEHFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLANQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + + +AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTV----CVEQAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIEQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|227326603|ref|ZP_03830627.1| glycyl-tRNA synthetase subunit beta [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 689 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 332/724 (45%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L + + ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRNLAESFAANFTAELDAANLAHGDVSWFAAPRRLALKVAR 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LSASQPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVEQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRWS + ++RP+ ++ +L Sbjct: 119 RAHAKGEQAQALLAGMVSTALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 E++I + I GHRF + + + Y + LE V+ D + R+ I Sbjct: 169 GEELIPGQVLGIDSARTIRGHRFMGEAEFTIDNAEQYPQILLERGKVVADYDARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNSGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++G+ ++ RI+ L +A I A+V Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGSLRDKTDRIQALAGWVAGQIGANVDH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+D+L + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDSLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGDKLSNAKVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F S + KR+ IL K ++ ++ L AE L + Sbjct: 566 AVSHFRSLDAAAALAAANKRVSNILT---KSTDTLNESVNAAVLKDAAEITLATHLVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + RY + L S+ EP++ FFDQV+V +D +VR NRL+LL ++ + L V Sbjct: 623 DKLTPLFAEGRYQEALVELASLREPVDAFFDQVMVMAEDEQVRVNRLTLLSQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|332288855|ref|YP_004419707.1| glycyl-tRNA synthetase subunit beta [Gallibacterium anatis UMN179] gi|330431751|gb|AEC16810.1| glycyl-tRNA synthetase subunit beta [Gallibacterium anatis UMN179] Length = 689 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 203/721 (28%), Positives = 346/721 (47%), Gaps = 61/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL EI +EE+P + K A + L + G+ + + + +P RL + + GL+ Sbjct: 4 KNFLAEIGTEELPPKALKKLAVAFKDNVEQELTQAGLAFDAVEWFASPRRLAVKVLGLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P K E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 64 AQPSKEVEKRGPAVAAAFDAEGKPTKAAEGWARGCGISVDQAERLVTD--KGEWLVHRAV 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +++L I+ A+ K+P PK MRW + +IRP+ ++ + ++ Sbjct: 122 IEGQPTKNLLLGIISNALAKLPIPKPMRWGDKNE-----QFIRPVHTVTLLF-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I+ + + G GHRF + + D Y + L E+ V+ D E R+ I DA Sbjct: 172 LIEGKILGVKSGRTIRGHRFLGQQEFTIDNADQYPQLLAEKGSVIADFEQRKAIIRQDAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A+ VG ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 232 KAAAKVGGIADIEEDLLDEVTSLVEFPVVMTAKFEERFLAVPAEALVYTMKGDQKYFPIY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI VSNI D +++++GN +VV RL DA F+K D Sbjct: 292 DQNGKLLPNFIFVSNINPQD-QSSVIEGNEKVVRPRLSDAEFFFKTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L + L+ + RL V+F ++GT ++ RI L +IA I ADVA +R Sbjct: 338 -------LKQRLEDNLPRLKT--VLFQQQLGTLFDKTERIEKLSGEIAAQIGADVAKAER 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPHSLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 + +V+LADK DTL+ + I + P G KDP+ALRRA LG++RII+E K+ + L + Sbjct: 449 ACSVALADKFDTLVGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLVDLAQKAA 508 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++++ F R + + + I D+I+A+L +K +N Sbjct: 509 ALYGDKLSNANVVEDVVDFILGRFRAWYQEEGIAVDVIQAVLACRPTKPADFDARVKAVN 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ IL+ K + + I E L + + + Sbjct: 569 HFRTLDAAQALAAANKRVQNILS---KVDGALPENIDLSLCREPQEINLAERVLELQREL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + Y + L + E ++ FFD V+VN +D ++R NRL+LL+ ++++ + ++ Sbjct: 626 QPLFEKGDYQTVLSRLADLRESVDSFFDNVMVNAEDEKLRQNRLALLKNLRDLFFKIADI 685 Query: 699 Q 699 Sbjct: 686 S 686 >gi|315633368|ref|ZP_07888659.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter segnis ATCC 33393] gi|315477868|gb|EFU68609.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter segnis ATCC 33393] Length = 688 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 207/720 (28%), Positives = 343/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGNKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA E I + AE+ L + +Q Sbjct: 570 FRTLDSAEALAAANKRVANILAKAEGDIG----AIDVALCVEPAEQVLAQSVLSLAKEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L + +P++ FFD V+VN +D ++R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGEYTAVLDKLAGLRQPVDNFFDNVMVNAEDAKLRQNRLAILNTLQGLFLQVADIS 685 >gi|295098692|emb|CBK87782.1| glycyl-tRNA synthetase beta chain [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 689 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 204/724 (28%), Positives = 338/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAASQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPDMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + + + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDTVIPATILGVASDRVIRGHRFMGESEFTIDNADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEDAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D + I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-SQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNAKVVDDVIDFMLGRFRAWYQDEGYSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEISLAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + + I+ FF++V+VNV+D+E+R NRLS+L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQEALVELAELRDVIDAFFEKVMVNVEDKELRINRLSMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|309787763|ref|ZP_07682374.1| glycyl-tRNA synthetase beta subunit [Shigella dysenteriae 1617] gi|308924513|gb|EFP70009.1| glycyl-tRNA synthetase beta subunit [Shigella dysenteriae 1617] Length = 682 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 205/716 (28%), Positives = 334/716 (46%), Gaps = 61/716 (8%) Query: 7 EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK 66 EI +EE+P + AE + L G+ + ++ + P RL L + L+ P++ Sbjct: 2 EIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDR 61 Query: 67 IEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 62 EIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAHVKGES 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 E +L +V ++ K+P PK MRW + ++RP+ ++ +L +K+I Sbjct: 120 TEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL-----GDKVIPAT 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASA 238 + I + GHRF + + D Y L E V+ D E R+ I DA A Sbjct: 170 ILGIQSDRVIRGHRFMGEPEFAIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARK 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F +G Sbjct: 230 IGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPSEALVYTMKGDQKYFPVYANDGK 289 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 290 LLPNFIFVANIESKD-QQQIISGNEKVVRPRLADAEFFFNTDRK---------------- 332 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+ + RL V+F ++GT ++ RI+ L IA+ I ADV RA +LS Sbjct: 333 ----KRLEDNLPRLQT--VLFQLQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLS 386 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ ++ Sbjct: 387 KCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALA 446 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------ 532 +ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E+ Sbjct: 447 IADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGD 506 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 ++I F R + + D D I+A+L +K ++ F + Sbjct: 507 KLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTL 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + KR+ ILA K + +S ++ L E +L + ++ Sbjct: 567 EAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFA 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY L + EP++ FFD+V+V VDD+E+R NRL++L+ ++ + L V ++ Sbjct: 624 EGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADIS 679 >gi|85703625|ref|ZP_01034729.1| glycyl-tRNA synthetase beta subunit [Roseovarius sp. 217] gi|85672553|gb|EAQ27410.1| glycyl-tRNA synthetase beta subunit [Roseovarius sp. 217] Length = 725 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 282/748 (37%), Positives = 397/748 (53%), Gaps = 72/748 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAAEDL L L E G+ Y + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQTKAAEDLRARLTEALVEAGLTYAGAAAFSTPRRLALTVQGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A +KAI+GFLR GL T +I+ D KKG VY A + KP R Sbjct: 61 GQSPTTREERKGPRVDAPEKAIEGFLRGAGL-TREQLEIR-DEKKGQVYFATITKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ + I+ PWPKSMRW + W+RPL SILCIL E + K++DLD+ Sbjct: 119 AEIVAEELDRIIRNFPWPKSMRWGAG-----SLRWVRPLHSILCILTDEAGEVKVVDLDV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF V S D Y L A V+L+ E R I +A A A G Sbjct: 174 DGIRAGNSTEGHRFMGAGRFAVTSFDDYRTKLRRAHVILEAEERAQHIWQEASNQAFASG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LL E+ GLVEW V MG D+ +L LP E+++ ++K +QK F + + Sbjct: 234 LELVEDSGLLAEVAGLVEWPVVLMGRIDEAFLGLPPEVLQTSMKEHQKFFSVKNPKTGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D GA I+ GN +V+AARL DA FW+ D + A Sbjct: 294 ERFVTVANVETADQGATILAGNQKVLAARLSDAKFFWENDLRTVQAQGLEGMGA------ 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + V FH K+G+Q +R++RI L ++IA + AD L ++A ++KA Sbjct: 348 ------------GLAHVTFHNKLGSQADRIARIAALAREIAPHVGADADLAEQAAKVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA A +EH P GP + VP+ +S+ V+LA Sbjct: 396 DLQSAMVGEFPELQGLMGRYYAAAAGLPAEVAAACQEHYSPLGPGDAVPSAPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DK+DTL FWAI+EKP+GSKDPYALRRA LG+ R+++ ++ + L + Sbjct: 456 DKIDTLTGFWAIDEKPTGSKDPYALRRAALGVDRLVVHGQLSVKLLDVLTGSFNRVGIAI 515 Query: 533 -------------------------------------NLILFFHDRLKLYLHDRDIRHDL 555 NL+ F HDRLK++L D IRHD+ Sbjct: 516 SETASQNKQKLGGINISGGAFQVLPEVDGRRVDARAVNLLSFLHDRLKVHLKDDGIRHDV 575 Query: 556 IEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLE 613 I+A L ND+L +V L +F + GE L KR IL E K+ E S Sbjct: 576 IDACLAMEGNDDLTLLVKRATALADFLKTDDGENLLQGFKRANNILTQAEAKDGVEYSYG 635 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 ++ + EK L+A ++ I ++ + + + ++ PI+ FF V VN + Sbjct: 636 ADVKFAETDEEKALFAALATAEPAIAIALKSEDFAGAMGAIAALRAPIDAFFTAVQVNAE 695 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 + +R NRL+LL I++I L ++ +I Sbjct: 696 SQVIRRNRLNLLSSIRHICLQAADLTRI 723 >gi|261341815|ref|ZP_05969673.1| hypothetical protein ENTCAN_08299 [Enterobacter cancerogenus ATCC 35316] gi|288316188|gb|EFC55126.1| glycyl-tRNA synthetase, beta subunit [Enterobacter cancerogenus ATCC 35316] Length = 689 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 204/724 (28%), Positives = 338/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAASQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + + + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDTVIPATILGVASDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARQIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDPTQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNAKVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLDAAAALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + E I+ FF++V+VNV+D+E+R NRL++L+ ++ + L V Sbjct: 623 DKLEPFFAEGRYQEALVELSELREAIDAFFEKVMVNVEDQELRINRLTMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|145636932|ref|ZP_01792596.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittHH] gi|145269790|gb|EDK09729.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae PittHH] Length = 688 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 KGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLLRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLSRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|238793179|ref|ZP_04636807.1| Glycyl-tRNA synthetase beta subunit [Yersinia intermedia ATCC 29909] gi|238727552|gb|EEQ19078.1| Glycyl-tRNA synthetase beta subunit [Yersinia intermedia ATCC 29909] Length = 689 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 328/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVVWYAAPRRLAVKVTDLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + S D Y + LE V+ D E R++ I DA Sbjct: 173 IPGTVLGIDSDRVIRGHRFMGEAEFTIDSADQYPQILLERGKVIADYELRKSIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGIADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGSLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNGNVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAATLAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGNYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|254362729|ref|ZP_04978813.1| glycine--tRNA ligase [Mannheimia haemolytica PHL213] gi|261491870|ref|ZP_05988449.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|153094354|gb|EDN75209.1| glycine--tRNA ligase [Mannheimia haemolytica PHL213] gi|261312525|gb|EEY13649.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 688 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 200/720 (27%), Positives = 351/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKVLSLAES 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ + G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK+MRW ++RP+ ++ + AE + Sbjct: 123 EGQPTKNLLVDIIAKSLANLPIPKTMRWGDKTE-----QFVRPVHTVTLLFGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++++ D Y + L++ V+ D R+ IL + Sbjct: 173 IEGEILGVKSGRTIRGHRFLGEREFQIENADQYPQLLKDRGSVVADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F + Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYS 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQKLEDQLPRLET--VLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSAQ 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + + I + AEK L + +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADIAIGD----IDVSACVEPAEKALAEAVIALKAEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ +P++ FFD V+VN +D+++R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVADIS 685 >gi|190151158|ref|YP_001969683.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264507|ref|ZP_07546092.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692361|sp|B3GZ55|SYGB_ACTP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189916289|gb|ACE62541.1| Glycyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306870204|gb|EFN01963.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 688 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 207/720 (28%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + E ++P + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADVAIGE----VNPTACVEPAEKALAEAVLGLRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L S+ +P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAKGEYTAVLDKLASLRQPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|261494658|ref|ZP_05991138.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309623|gb|EEY10846.1| glycine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 688 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 350/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQSGLAFEKVEWFAAPRRLAVKVLSLAES 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + Sbjct: 65 QPSKEVEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK+MRW ++RP+ ++ + AE + Sbjct: 123 EGQPTKNLLVDIIAKSLANLPIPKTMRWGDKSE-----QFVRPVHTVTLLFGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF +++ D Y + L++ V+ D R+ IL + Sbjct: 173 IEGEILGVKSGRTIRGHRFLGEREFTIENADQYPQLLKDRGSVVADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F + Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYS 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQKLEDQLPRLET--VLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSAQ 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + + I + AEK L + +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADIAIGD----IDVSACVEPAEKALAEAVIALKAEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ +P++ FFD V+VN +D+++R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVADIS 685 >gi|290473327|ref|YP_003466193.1| glycine tRNA synthetase subunit beta [Xenorhabdus bovienii SS-2004] gi|289172626|emb|CBJ79395.1| glycine tRNA synthetase, beta subunit [Xenorhabdus bovienii SS-2004] Length = 689 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 336/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + LK + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFEAELKNANLGHGEISWFAAPRRLALKVANLAVA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERMVTD--KGEWLLYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +++L +V ++ K+P PK MRW + ++RP+ ++ +L ++ + Sbjct: 123 KGREAKELLADMVSSSLGKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ID ++ I I GHRF + + + Y L E V+ D R+ I DA + Sbjct: 173 IDGEILGIKSDRIIRGHRFMGEAEFAIDNAEQYPTILQERGRVIADYYARKALIKRDAEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAMQLGGVADLTDSLLEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KSGKLMANFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 340 --------QRLEDNLLRLET--VLFQKQLGTLRDKTDRIQALAGWIAEKIGADVTHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ +S Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYQPRFSGDELPSTAVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L E+ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLQTLAEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + ++ D I+A+L +K + Sbjct: 510 LYGDKLTNENVVDDVVEFMLGRFRTWYQEQGYSVDAIQAVLARRPTQPADFDARMKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E+K ++ + L E +L + + Sbjct: 570 FRTLDEAVSLAAANKRVSNILAKSEEK---LNDCVLASVLKAAEEIQLATHLVVLKDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L S+ E ++ FFD V+V +D++VR NRL+LL ++ + L V ++ Sbjct: 627 PLFAEGNYQDALVELASLREVVDAFFDNVMVMDEDQQVRINRLTLLSELRELFLRVADIS 686 >gi|269137370|ref|YP_003294070.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda EIB202] gi|267983030|gb|ACY82859.1| glycyl-tRNA synthetase, beta subunit [Edwardsiella tarda EIB202] gi|304557471|gb|ADM40135.1| Glycyl-tRNA synthetase beta chain [Edwardsiella tarda FL6-60] Length = 689 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + A+ + L G+ + ++ + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAQAFADNFRTELDNAGLAHGDIEWFAAPRRLALKVAALNAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QPDREIEKRGPAIAQAFDADGKPTKAAEGWARGCGISVDQADRLSTD--KGEWLLYRALQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +D+L T V A+ ++P PK MRW + + ++RP+ ++ +L +E Sbjct: 123 KGQRAQDLLPTRVANALSRLPIPKLMRWGDSDT-----QFVRPVHTVTLLLGSES----- 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + +P + GHRF + S D Y + LE V+ D + R+ I DA Sbjct: 173 IPATILGVPSDRVIRGHRFMGEAEFTIDSADQYPQILLERGKVIADYDARKALIKRDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAARIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI + D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGKLLPNFIFVANIDSKDA-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++G+ ++ RI L IAQ I ADV + RA Sbjct: 340 --------QRLEDNLPRLET--VLFQQQLGSLRDKTDRITALAGWIAQQIGADVNMATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E PR + +PT+ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEADEVAVALNEQYMPRFAGDALPTSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++ADK+DTL + I + P G KDP+ALRRA LG++RI++E K+ + L ++ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIVVEKKLPLDLLTLTQEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L ++ ++ Sbjct: 510 LYGDKLSNANVVDDVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ ++ L AE RL A + + Sbjct: 570 FRTLPEAATLAAANKRVSNILA---KSGDVLAEQVQAVLLKEPAEIRLAANLITLQEKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ +P++ FF+QV+V DD +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFADGRYQEALVELATLRQPVDDFFEQVMVMADDEQVRINRLTLLNKLRDLFLQVADIS 686 >gi|296100579|ref|YP_003610725.1| glycyl-tRNA synthetase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055038|gb|ADF59776.1| glycyl-tRNA synthetase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 689 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSEKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLAHGKIEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAASQPDREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGERAEALLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + + + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDTVIPATILGVASDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L IA+ I ADV Sbjct: 340 ------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E +++ L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALAMQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + + I+ FF++V+VNV+D+++R NRLS+L+ ++ + L V Sbjct: 623 DKLEPYFAEGRYQEALVELAELRDVIDAFFEKVMVNVEDKDLRINRLSMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|152978094|ref|YP_001343723.1| glycyl-tRNA synthetase subunit beta [Actinobacillus succinogenes 130Z] gi|171472951|sp|A6VLE1|SYGB_ACTSZ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|150839817|gb|ABR73788.1| glycyl-tRNA synthetase, beta subunit [Actinobacillus succinogenes 130Z] Length = 689 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 343/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +F EI +EE+P + K A + + LK+ G+ + + + P RL + + L+ + Sbjct: 5 NFFAEIGTEELPPKALKKLATAFAENVENELKQAGLAFDKVEWFAAPRRLAVKVLNLAAN 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVDQAERLVTD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++++ I+ ++ +P PK+MRW + ++RP+ ++ +L E + Sbjct: 123 EGQPTKNLMLDIIAKSLANLPIPKTMRWGDKN-----VQFVRPVHTVTLLLGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ I G GHRF ++ D Y LEE V+ D RR IL + Sbjct: 173 IEGEILGIASGRTIRGHRFLGEREFQISHADQYPSLLEEKGCVIADFNKRREMILTKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G + DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEDDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L FI VSNI D I++GN +VV RL DA F+ D+ Sbjct: 293 KEGKLLPHFIFVSNINPVDPMP-IIEGNEKVVRPRLSDAEFFFNTDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL V+F ++GT ++ RI+ L +IA I AD A +RA Sbjct: 340 --------QRLEDLLPRLQT--VLFQQQLGTLLDKTKRIQSLAGEIAGQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR +N+P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ ++ Sbjct: 450 SSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLSLDLADLVKKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVDDVVDFMLGRFRAWYQDGGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EI EI LL EK L + + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVAGEIRSEIDRTLLLEAEEKALAEQVLALQSELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y D L + E ++ FFD+V+VN +D ++R NR ++L ++N+ L V ++ Sbjct: 627 PVFAKGDYQTALDRLACLREVVDNFFDKVMVNAEDEKLRQNRQAMLNVLRNLFLQVADIS 686 >gi|251793743|ref|YP_003008473.1| glycyl-tRNA synthetase subunit beta [Aggregatibacter aphrophilus NJ8700] gi|247535140|gb|ACS98386.1| glycyl-tRNA synthetase, beta subunit [Aggregatibacter aphrophilus NJ8700] Length = 688 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 343/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLTFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA DG+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAADGWARGCGITVEQAERIATD--KGEWLVRRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEGLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SVVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSTA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDDGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA E I + AE+ L + +Q Sbjct: 570 FRTLDSAEALAAANKRVANILAKAEGDVG----AIDVALCVEPAEQVLAQSVLSLAKEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L + +P++ FFD V+VN +D ++R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGEYTAVLDKLAGLRQPVDNFFDNVMVNAEDAKLRQNRLAILNTLQGLFLQVADIS 685 >gi|78484700|ref|YP_390625.1| glycyl-tRNA synthetase, beta subunit [Thiomicrospira crunogena XCL-2] gi|78362986|gb|ABB40951.1| glycyl-tRNA synthetase, beta subunit [Thiomicrospira crunogena XCL-2] Length = 690 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 213/723 (29%), Positives = 349/723 (48%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+EI +EE+P + K + + L + + Y Y +P RL + + L Sbjct: 6 AEFLVEIGTEELPPKALKKLSNAFMDGIKAGLDDAELNYGETAVYASPRRLAVRIDALQT 65 Query: 62 HSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +K ER GP A KA+ GF R G +I+ + KG + L Sbjct: 66 KQADKTVERKGPAKKAAFDAEGQPTKALQGFARGCGADVADLSEIETE--KGIWMVYYLE 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++L IV ++ K+P PK MRW + ++RP+ L +L ++ Sbjct: 124 QKGQLTAELLPAIVNQSLAKLPIPKRMRWGASD-----VEFVRPVHWALMLL-----DDQ 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ + N T+GHRFHAP I++ Y+ L E+ V D E R+ I Sbjct: 174 VVPATILGHQTSNKTHGHRFHAPQAIEICKPSEYVSVLKEQGYVQADFEERKARIREQVE 233 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A + G D DLL+E+ L EW +G FD+ +L +P E + +K +QK F Sbjct: 234 AVAQSAGGVADIDDDLLDEVTALNEWPTAVVGDFDESFLSVPSEALISAMKGHQKYFHIL 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI +SNI++S+ ++ GN RV+ RL DA FW +D+ Sbjct: 294 DKAGQLMAKFITISNIESSNP-ESVKNGNERVIRPRLSDAKFFWNQDRK----------- 341 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PLD + RL VVF K+GT ++V R+ L KI + + D +++R Sbjct: 342 ---------QPLDDFLPRLKT--VVFQQKLGTLYDKVERLETLVVKIGRPLGEDAQVLER 390 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A LSK DL TE+V EFP+LQG +G+ YA QNE++ DAI+ +PR + +P + + Sbjct: 391 AARLSKCDLMTEMVGEFPDLQGVMGRYYAQAQNEDVKVADAIDGQYQPRFAGDQLPDSVV 450 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 S +++ADKLDT+ + I + P+G KDP+ALRR+ LG++RI++E ++D+ L I Sbjct: 451 SQALAIADKLDTITGIYGIGQVPTGDKDPFALRRSALGLVRILIEKELDLDLQLMIRFSL 510 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + F RLK Y + + + EA+ + L I+ + Sbjct: 511 DLHSEIDTSEALVMEIYDFIISRLKAYYAGKGVSAEQFEAVRVCAPSHPLDFAKRIEAVC 570 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 +F + E + KRI IL +K + + E+ ++E+ L+ + + Sbjct: 571 QFSEMDEAESLSAANKRIANIL---KKVDATLPEEVESSLFEEDSERDLFDALDALRETV 627 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y LL +I +P++ FFD V+V DD V+ NRL+LL I + V ++ Sbjct: 628 SNKIAERDYAGAMQLLATIRQPVDAFFDNVMVMADDEAVKLNRLALLNQIYQLFRQVADI 687 Query: 699 QKI 701 ++ Sbjct: 688 SRL 690 >gi|268592254|ref|ZP_06126475.1| glycyl-tRNA synthetase, beta subunit [Providencia rettgeri DSM 1131] gi|291312029|gb|EFE52482.1| glycyl-tRNA synthetase, beta subunit [Providencia rettgeri DSM 1131] Length = 689 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 199/720 (27%), Positives = 336/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDGADIAHGAVTWFAAPRRLALKVADLAAS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QPDREIEKRGPAISQAFGPDGQPTKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAQM 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++L +V A+ K+P PK MRW+ + ++RP+ ++ +L ++ + Sbjct: 123 KGQAVSELLADMVSRALAKLPIPKLMRWADKDT-----QFVRPVHTVTLLLGSD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ID ++ I G GHRF + + + Y L E V+ D R+ I DA + Sbjct: 173 IDGEILGIKSGRTIRGHRFMGESEFTIDNAEQYPAILRERGKVMADYAERKAVIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQALGGQADLTDSLLEEVTSLVEWPVVLTAKFEEKFLDVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KTGKLMPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ R+ L IA I ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQKQLGTLRDKTDRLEALAGWIANKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ +S Sbjct: 390 GLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFSGDALPSTDVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + E+ Sbjct: 450 AALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTEEAAR 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNKNVVNDVVEFMLGRFRSWYQELGYSIDTIQAVLARHPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + + KR+ IL+ E+K ++ + L E +L + + Sbjct: 570 FRSLEEAQALAAANKRVSNILSKSEEK---LADNVLASVLKTPEEVKLATHVVVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L S+ + ++ FF V+V +D+ VR NRL+LL ++ + L V ++ Sbjct: 627 PMFAERNYQEALVELASLRDIVDEFFANVMVMDEDQAVRINRLTLLSQLRELFLKVADIS 686 >gi|238917996|ref|YP_002931510.1| glycyl-tRNA synthetase subunit beta [Edwardsiella ictaluri 93-146] gi|259511924|sp|C5B995|SYGB_EDWI9 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238867564|gb|ACR67275.1| glycyl-tRNA synthetase, beta subunit, putative [Edwardsiella ictaluri 93-146] Length = 689 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + A+ + L G+ + ++ + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAQAFADNFRTELDNAGLAHGDIEWFAAPRRLALKVAALNAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QPDREIEKRGPAIAQAFDAEGKPTKAAEGWARGCGISVDQAERLSTD--KGEWLLYRALQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +D+L +V A+ ++P PK MRW + + ++RP+ ++ +L +E Sbjct: 123 KGQRAQDLLPALVASALSRLPIPKLMRWGDSDT-----QFVRPVHTVTLLLGSES----- 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + +P + GHRF + S D Y + LE V+ D + R+ I DA Sbjct: 173 IPATILGVPSDRVIRGHRFMGEAEFTLDSADQYPQILLERGKVIADYDARKALIKRDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAARIGGVADLSDSLLEEVTSLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI + D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGKLLPNFIFVANIDSKDA-QQIIAGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++G+ ++ RI L IAQ I ADV + RA Sbjct: 340 --------QRLEDNLPRLE--SVLFQQQLGSLRDKTDRITALAGWIAQQIGADVNMATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E PR + +PT+ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDALPTSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++ADK+DTL + I + P G KDP+ALRRA LG++RI++E K+ + L ++ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIVVEKKLPLDLLTLTQEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L ++ ++ Sbjct: 510 LYGDKLGNASVVDDVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ ++ L AE RL A + + Sbjct: 570 FRTLPEAATLAAANKRVSNILA---KSGDVLAEQVQAVLLKEPAEIRLAANLITLQEKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ +P++ FF+QV+V DD +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFADGRYQEALVELATLRQPVDDFFEQVMVMADDEQVRINRLTLLNKLRDLFLQVADIS 686 >gi|238757318|ref|ZP_04618504.1| Glycyl-tRNA synthetase beta subunit [Yersinia aldovae ATCC 35236] gi|238704357|gb|EEP96888.1| Glycyl-tRNA synthetase beta subunit [Yersinia aldovae ATCC 35236] Length = 689 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 327/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSANLPHGEVVWYAAPRRLALKVINLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDTEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I I GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRIIRGHRFMGEAEFTIDNADQYPQILLERGKVIADYELRKTIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQQIGGIADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+K D+ Sbjct: 293 AAGNLMPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT + RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRHKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNSKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVRASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|220936411|ref|YP_002515310.1| Glycine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] gi|219997721|gb|ACL74323.1| Glycine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] Length = 696 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 217/724 (29%), Positives = 350/724 (48%), Gaps = 62/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D L+EI +EE+P + + + + L E G+ ++ + P RL L + ++ Sbjct: 5 HDLLIEIGTEELPPKALKGLRDAFAESVAAGLAEAGIGASKVQAFAAPRRLALLCRDVAA 64 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ ER GP + G KA GF S G++ +++ D KG + Sbjct: 65 RQPDQSMERRGPALAAAFDDNGNPTKAAQGFAASCGVKPEDLERLETD--KGAWLVHRHV 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + ++ +IV A+ +P PK MRW + + ++RP+ ++ +L + Sbjct: 123 EPGKAAAALIPSIVERALAALPIPKRMRWGDSDA-----EFVRPVHWVVLLL-----GDA 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAH 233 +++ ++ + G T GHRFH P + + Y L+ E V+ D E RR AIL Sbjct: 173 VVEAEILGVKAGRETRGHRFHHPDTLFIAEPAAYAPLLQTEGRVMADFEARREAILGQVE 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + + DLL+E+ LVEW G F+ ++L +P+E + T++ NQK F Sbjct: 233 DAAQKLGGRALIEPDLLDEVTALVEWPSAIAGHFETRFLDVPQEALITTMQDNQKYFPVV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI VSNI++ + + +GN RV+ R DA FW +D+ Sbjct: 293 DQVGRLMPHFITVSNIESREP-ERVREGNERVIRPRFSDAEFFWNQDRK----------- 340 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 KPLD + L VVF K+GT E+ R+ L K +A L++ D R Sbjct: 341 ---------KPLDSHLEALK--HVVFQRKLGTLFEKTERVAALTKHLAGLLNVDHGEALR 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF ELQG +G+ YA E A+EE PR +N+P + Sbjct: 390 AAMLSKCDLQTHMVFEFTELQGTMGRYYAEHGGEPADVAQALEEQYWPRHAGDNLPETGV 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++LAD+LDTL+ +AI +KP+G+KDPY LRRA LG++RI++E ++D+ L I Sbjct: 450 GKALALADRLDTLVGIFAIGQKPTGAKDPYGLRRAALGVLRILIERELDLDLLALIRAAA 509 Query: 534 L----------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + +RL+ Y DR I D+ EA+L L ++ + Sbjct: 510 EGYQGTDVNAAGAVASVFDYMMERLRAYYTDRGIGVDVFEAVLACRPLRPLDFDRRVRGV 569 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + F S + + + KRI IL +K + +I P +AE+ L+ + Sbjct: 570 DHFRSLPEAQSLAAAHKRIHNIL---KKVEGALPEQIDPARFSEDAERALFDRLEALRGT 626 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 RY + L ++ EP++ FFD V+V DD VRDNRL+LL + + L V + Sbjct: 627 ALPLFTEGRYTEGLAALAALREPVDRFFDGVMVMADDAAVRDNRLALLNSLSGLFLEVAD 686 Query: 698 VQKI 701 + ++ Sbjct: 687 MSRL 690 >gi|146309830|ref|YP_001174904.1| glycyl-tRNA synthetase subunit beta [Enterobacter sp. 638] gi|166980039|sp|A4W573|SYGB_ENT38 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145316706|gb|ABP58853.1| glycyl-tRNA synthetase beta chain [Enterobacter sp. 638] Length = 689 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 335/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + + L G+ + + + P RL L + Sbjct: 1 MSDKTFLVEIGTEELPPKALRSLAESFAANVTAELDNAGLTHGKIEWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LAASQADREVEKRGPAISQAFDAEGKPSKAAEGWARGCGITVDQAERLTTD--KGEWLLY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 E +L ++ ++ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAHVKGESAEALLPNMIATSLAKLPIPKLMRWGASD-----VHFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 + +I + I + GHRF + + D Y + LE V+ D E R+ I Sbjct: 169 GDTVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPQILLERGKVIADYELRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEEAARKIGGNADLSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYANDGKLLPNFIFVANIESKDPIQ-IISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL V+F ++GT ++ RI L IA+ I ADV Sbjct: 340 ------------KRLEDHLPRLQT--VLFQQQLGTLRDKTDRIAELSGWIAREIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLSLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + D D I+A+L +K Sbjct: 506 EAVRLYGDKLTNAKVVDEVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K + ++ ++ L E L + Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KSDETLNERVNAATLKEPEEIALALQVVVLR 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY + L + E I+ FF++V+VNV+D+++R NRLS+L+ ++ + L V Sbjct: 623 DKLEPFFAEGRYQEALVELAELREVIDAFFEKVMVNVEDKDLRINRLSMLEKLRELFLRV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|157368319|ref|YP_001476308.1| glycyl-tRNA synthetase subunit beta [Serratia proteamaculans 568] gi|166980041|sp|A8G7U0|SYGB_SERP5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157320083|gb|ABV39180.1| glycyl-tRNA synthetase, beta subunit [Serratia proteamaculans 568] Length = 689 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 325/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAEAFAANFTAELDSANLEHGEVSWFAAPRRLALKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V ++ K+P PK MRW + ++RP+ ++ +L AE + Sbjct: 123 KGQSAQALLAGMVSNSLAKLPIPKLMRWGDSD-----VQFVRPVHTVTMLLGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSARTVRGHRFMGEAEFTIDNADQYPQILLERGKVIADYETRKAMIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AASTIGGKADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 AAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAGQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPESLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 ++++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CSLAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLTLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + + D I+A+L +K + Sbjct: 510 LYGSKLTNAKVVDEVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLEAAAALAAANKRVSNILA---KSTDTLNDRVHASVLKEAAEIQLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L + EP++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PYFAAGNYQDALVELADLREPVDAFFDNVMVMAEDEAVRVNRLTLLSKLRELFLQVADIS 686 >gi|126728902|ref|ZP_01744717.1| glycyl-tRNA synthetase subunit beta [Sagittula stellata E-37] gi|126710832|gb|EBA09883.1| glycyl-tRNA synthetase subunit beta [Sagittula stellata E-37] Length = 703 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 276/727 (37%), Positives = 400/727 (55%), Gaps = 52/727 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL ++ L E G+ Y + + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARAAGDLKKMMTDGLVEAGLTYASAAAFHTPRRLCLTVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KA++GF+R G+ + ++ KKG Y A + P R Sbjct: 61 AESPTLKEERRGPKVGAPDKALEGFMRGAGVTRDQLEE--REDKKGAFYYATVTTPGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ + ++ PWPKSMRW T + W+RPL ILC++ ++ E ++DL++ Sbjct: 119 EAIVAEQLEKTVRGFPWPKSMRWGTG-----SLRWVRPLHRILCLM-RDEGGEHVVDLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF P +V S + Y L+ A V+L E R I NDA +A A G Sbjct: 173 DGIRAGRTTEGHRFMGGAPFEVTSFEDYAAKLKRAHVILSAEERAEHIWNDATNMAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L++VEDK LL E+ GLVEW V MG + +L LP E+++ ++K +QK F R + Sbjct: 233 LDVVEDKGLLAEVAGLVEWPVVLMGDIEDTFLGLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+NI+ +D GA I+ GN +V+AARL DA FW+ D L K++ L D Sbjct: 293 EKFVTVANIETADNGATILAGNQKVLAARLSDAKFFWEND------LRVAKDAGLTAWTD 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + DV FH K+G+Q R+ RI L + +A + AD +A ++KA Sbjct: 347 R------------LEDVTFHNKLGSQKARIERIAALARDLAPKVGADTDRAAQAAEVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A +EH P GP ++VPT S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPADVAAACQEHYSPLGPSDDVPTAPTSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------------- 527 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + I LS Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLGNGLRISLSDVISEALENVGAAR 514 Query: 528 -----------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIK 575 +D +L+ FFHDRLK+YL D+ + HD+I+A L ND+L +V + Sbjct: 515 PNPQDEDDYTGLDKDLDLLAFFHDRLKVYLRDQGVSHDVIDASLAMDGNDDLTLLVKRAE 574 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDF 634 L + G + KR IL E+K+ E S ++ + E+ L+ + Sbjct: 575 ALAAVMQTEDGRNLVQGFKRANNILTQAEEKDGVEYSFGADVKFAETDEERALFEALDAA 634 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I +M + + + + ++ PI+ FFD V VN ++ VR NRL+LL I+ L Sbjct: 635 DKKIAPAMQAEDFTAAMEAMATLRAPIDAFFDAVQVNSENSVVRRNRLNLLSRIRQTCLQ 694 Query: 695 VINVQKI 701 + ++ KI Sbjct: 695 IADLTKI 701 >gi|260914511|ref|ZP_05920980.1| glycyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] gi|260631612|gb|EEX49794.1| glycyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] Length = 689 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 212/720 (29%), Positives = 351/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ + + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVELELNQAGLTFDKVEWFAAPRRLAVKVLGLATS 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + Sbjct: 65 QPSKQIEKRGPAVSAAFDSEGKPTKAAEGWARGCGINVEQAERIATD--KGEWLVHRATI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++LK IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLKDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF H ++ D Y L E+ V+ D R+ IL A Sbjct: 173 IEGEILGVTSGTTIRGHRFLGEHEFQISHADQYPALLKEKGSVVADFNERKALILAKAQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KEGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I ++P GS DP+ALRRA LG++RII+E + + L + ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQQPKGSADPFALRRAALGVLRIIVEKNLPLDLEEIVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D I D+I+++L ++ ++ Sbjct: 510 LFGDRLTNANVVEEVVDFMLGRFRAWYQDEGIAVDVIQSVLARRPTKPSDFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K E+ I + EK L + + Sbjct: 570 FRTLEAAEALAAANKRVSNILA---KVEGELPATIDTVLCVENTEKVLAEQVIALQAELT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y D L ++ EP++ FFD V+VNV+D+++R NRL++L ++N+ L V ++ Sbjct: 627 PLFAKGEYQVALDRLAALREPVDTFFDNVMVNVEDQKLRQNRLAILNNLRNLFLQVADIS 686 >gi|212711578|ref|ZP_03319706.1| hypothetical protein PROVALCAL_02653 [Providencia alcalifaciens DSM 30120] gi|212685680|gb|EEB45208.1| hypothetical protein PROVALCAL_02653 [Providencia alcalifaciens DSM 30120] Length = 689 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 194/720 (26%), Positives = 337/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L ++ L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSADITHGAVNWFAAPRRLALKVESLAAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QPDREVEKRGPAISQAFDAEGKPTKAAEGWARGCGITVDQAERLTTD--KGEWLLYRAQM 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++L +V ++ K+P PK MRW+ + ++RP+ ++ +L ++ I Sbjct: 123 KGQPVSELLIDMVSRSLAKLPIPKLMRWADKDT-----QFVRPVHTVTLLLGSD-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ++ ++ I I GHRF + + + Y L V+ D R+ I+ +A + Sbjct: 173 VNGEILGIKSDRIIRGHRFMGEAEFTIDNAEQYPEILRTRGKVIADYAERKAIIIANAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + L+EE+ LVEW V F+ K+L +P E + T+K +QK F Sbjct: 233 AAKALGGKADLTDSLVEEVTSLVEWPVVLTAKFEDKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 DAGKLMPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ R+ L IA I ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQQQLGTLRDKTDRLEALAGWIASKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ +S Sbjct: 390 GLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFAGDELPSTDVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + ++ Sbjct: 450 AALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTQEAVR 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNKNVVEDVVEFMLGRFRSWYQELGYSIDTIQAVLARRPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + + KR+ IL+ E+K ++ + L E +L + + Sbjct: 570 FRSLEEAQTLAAANKRVSNILSKSEEK---LADSVLASVLKTPEEVKLATHVVVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L S+ E ++ FF V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PMFAERNYQEALVELASLREVVDEFFANVMVMDEDPAVRINRLTLLSQLRELFLKVADIS 686 >gi|322830761|ref|YP_004210788.1| glycyl-tRNA synthetase, subunit beta [Rahnella sp. Y9602] gi|321165962|gb|ADW71661.1| glycyl-tRNA synthetase, beta subunit [Rahnella sp. Y9602] Length = 689 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 196/721 (27%), Positives = 330/721 (45%), Gaps = 61/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P + AE + L L + + +++ + P RL L + GL Sbjct: 4 KTFLVEIGTEELPPKALRSLAESFAANLTAELDAANLPHGDVKWFAAPRRLALKVSGLHE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 64 SQADREVEKRGPAVAQAFDAEGKPSKAAEGWARGCGITVDQADRLVTD--KGEWLVYRAH 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++ ++ K+P PK MRW + ++RP+ ++ +L ++ Sbjct: 122 VKGESAQQLLPAMIATSLSKLPIPKLMRWGDSD-----VQFVRPVHTVTLLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAH 233 +I + I GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 172 LIPAKILGIDSARTLRGHRFMGEPEFTIDNADQYPQILLERGKVIADYEQRKALIKRDAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 KAAKEIGGIADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 292 DAAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK----------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 K L+ + RL+ V+F ++GT ++ RI+ L IA+ I A+V R Sbjct: 340 ---------KRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALSGWIAEKIGANVENAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEQEEVAVALNEQYQPRFAGDELPASLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 449 ACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAV 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + + + D I+A+L +K ++ Sbjct: 509 RLYGDKLTNEKVVDDVVDFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA K + + L AE +L + + Sbjct: 569 YFRTLDEAATLAAANKRVSNILA---KSTDVLLDHVHASVLKEPAELKLATHLVVLRDKL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + +Y + L ++ E ++ FFD V+V ++ VR NRL+LL ++ + L V ++ Sbjct: 626 EPLFAAGQYKEALVELAALRETVDTFFDTVMVMDENEAVRINRLTLLSKLRELFLQVADI 685 Query: 699 Q 699 Sbjct: 686 S 686 >gi|329297820|ref|ZP_08255156.1| glycyl-tRNA synthetase subunit beta [Plautia stali symbiont] Length = 689 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 335/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ + ++ + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAEAFAAHFTAELDSAGLAHGDVSWFAAPRRLALKVAQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LAAAQPDREVEKRGPAVAAAFDAEGKPTKAAEGWARGNGITVEQAERLSTD--KGEWLVH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RTAVKGESAQALLPAMVATALSKLPIPKLMRWGASD-----VQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILN 230 +++I + I + GHRF + + + D Y + L E V+ D R+ I Sbjct: 169 SDELIPATILGIQSDRVIRGHRFIGEPELTLDNADQYPQLLQERGKVIADYVTRKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAQQLGGKADLSDRLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYAEDGQLLPNFIFVTNIESRDP-QQIISGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV Sbjct: 340 ------------KRLEDNLPRLET--VLFQKELGTLRDKTDRIQALAGWIAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 SPVACAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++I F R + + + D I+A+L +K Sbjct: 506 EAVRLYGSKLSNANVVDDVIDFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + KR+ ILA K ++ + L AE +L ++ G Sbjct: 566 AVSHFRTLEAASALAAANKRVSNILA---KATETLNDSVQASLLKENAEIQLATFVTALG 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 +Q RY L + E ++ FFD V+VN DD VR NRL+LL ++ + L V Sbjct: 623 DKLQPYFAEGRYQDALVELAQLREAVDNFFDNVMVNADDEAVRINRLTLLAQLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|270264147|ref|ZP_06192414.1| glycyl-tRNA synthetase, beta subunit [Serratia odorifera 4Rx13] gi|270041796|gb|EFA14893.1| glycyl-tRNA synthetase, beta subunit [Serratia odorifera 4Rx13] Length = 689 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 202/720 (28%), Positives = 326/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSANLEHGEVSWFAAPRRLALKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW S ++RP+ ++ +L AE + Sbjct: 123 KGQSAQALLAGMVSTALSKLPIPKLMRWGD-----SEVQFVRPVHTVTLLLGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I GHRF + + D Y + LE V+ D E R+ I DA Sbjct: 173 IPGTVLGIESARTLRGHRFMGEAEFTIDNADQYPQILLERGKVIADYEARKALIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQQIGGKADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 AAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAGQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPESLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 ++++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CSLAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + + D I+A+L +K + Sbjct: 510 LYGSKLSNAKAVDEVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLEEAAALAAANKRVSNILA---KSTDTLNDRVHAAVLKEAAEIQLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L ++ EP++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGDYQDALVQLAALREPVDAFFDNVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|229844013|ref|ZP_04464154.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 6P18H1] gi|229813007|gb|EEP48695.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 6P18H1] Length = 688 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 345/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNGIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYLPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDKLPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLLLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|300725252|ref|YP_003714581.1| glycine tRNA synthetase subunit beta [Xenorhabdus nematophila ATCC 19061] gi|297631798|emb|CBJ92519.1| glycine tRNA synthetase, beta subunit [Xenorhabdus nematophila ATCC 19061] Length = 694 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 203/720 (28%), Positives = 335/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFEAELNNANLGHGEVSWFAAPRRLALKVANLAAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERMVTD--KGEWLLYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +D+L +V ++ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGREAKDLLAEMVSSSLGKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGRD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 +D ++ I I GHRF +++ + Y L E V+ D E R+ I DA R Sbjct: 173 VDGEILGIKSDRIIRGHRFMGEAEFTIENAEQYPAILQERGRVIADYEARKAIIKRDAER 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G +LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAAQLGGVADLSDNLLEEVASLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+ D+ Sbjct: 293 NSGKLMANFIFVTNIESSDP-QQIISGNEKVVRPRLADAEFFFNTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALAGWIAEQIGADVEHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +V EF + QG +G YA E A+ E +PR +++P+ +S Sbjct: 390 GLLSKCDLMANMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYQPRFSGDDLPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++ADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L E+ Sbjct: 450 CAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLQTLAEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNEKAVDDVVEFMLGRFRAWYQELGYSVDTIQAVLARRPTQPADFDARMKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA E+K ++ + L E +L + + Sbjct: 570 FRTLDEAVSLAAANKRVSNILAKSEEK---LNDSVQASVLKAAEEIQLATHLVVLKEKLT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L S+ E ++ FFD V+V +D +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFAESNYQDALVELVSLREVVDAFFDNVMVMDEDSQVRINRLTLLSELRDLFLRVADIS 686 >gi|238765095|ref|ZP_04626030.1| Glycyl-tRNA synthetase beta subunit [Yersinia kristensenii ATCC 33638] gi|238696712|gb|EEP89494.1| Glycyl-tRNA synthetase beta subunit [Yersinia kristensenii ATCC 33638] Length = 689 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 203/720 (28%), Positives = 327/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSANLPHGEVIWYAAPRRLALKVINLSAS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLITD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVSTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I + I I GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRIIRGHRFMGESEFALDNADQYPQVLLERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 TAGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FFD V+V ++ VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFDSVMVMDENDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|307246733|ref|ZP_07528803.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255718|ref|ZP_07537522.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260170|ref|ZP_07541880.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852433|gb|EFM84668.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861395|gb|EFM93385.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865816|gb|EFM97694.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 689 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 347/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+FH ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFHQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLSLDLEDLVRKSAV 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRSLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|145632310|ref|ZP_01788045.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae 3655] gi|144987217|gb|EDJ93747.1| glycyl-tRNA synthetase beta subunit [Haemophilus influenzae 3655] Length = 688 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 343/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 KGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L + V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYLPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDKLPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLLLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + AEK L + T +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTA----CVEPAEKALAEAVLALRTEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 626 PLIAQGDYTTVLDKLANLRVPVDSFFDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 685 >gi|307251102|ref|ZP_07533026.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856932|gb|EFM89064.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 689 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGNKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRSLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|163761029|ref|ZP_02168107.1| glycyl-tRNA synthetase subunit beta [Hoeflea phototrophica DFL-43] gi|162281810|gb|EDQ32103.1| glycyl-tRNA synthetase subunit beta [Hoeflea phototrophica DFL-43] Length = 788 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 331/787 (42%), Positives = 451/787 (57%), Gaps = 87/787 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KAA DL + L + G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLIELRSEEIPARMQRKAAGDLRKSVTDALVDAGLTYEAAREYWTPRRLTLDIRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GF+R GL IS+ + DPKKGD Y+A + +P R Sbjct: 61 ARSKDVHEEIKGPSTKAPEQALAGFMRKAGLNDISEAHVHTDPKKGDFYVAHISRPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISA------------FSWIRPLKSILCILVA 168 E ++ ++P I+ WPKSMRW P + W+RPL+SI+C Sbjct: 121 EVIIADVMPGIIRGFSWPKSMRWGAASMPKGSSYHGIEGKGSESLKWVRPLQSIICTFGP 180 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E + +I ++ + GN T GHRFHAP P V+ D Y LE A V+LD E R+ I Sbjct: 181 ETEEPTVIAFEIDGLVAGNTTSGHRFHAPDPFTVRRFDDYADKLERARVVLDAERRKEII 240 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L+DA LA A GLELVED+ LL+E+ GLVEW V MG F++ +L +P+++IRLTIKTNQK Sbjct: 241 LSDARNLAFASGLELVEDEGLLDEVSGLVEWPVVLMGEFEEDFLAIPDDIIRLTIKTNQK 300 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 CFV R L+N FILVSNI+ASD G I GN +VV ARL DAL+FW DQ +LP+L Sbjct: 301 CFVLRRPGRGLSNKFILVSNIEASDAGKEIAYGNGKVVRARLSDALYFWNTDQADLPDLE 360 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L SA K LD+SKPLDQRMARLD L V FHAK+GTQGERV RI L ++A ++ AD Sbjct: 361 KLTASAEKLGLDMSKPLDQRMARLDQLGVTFHAKLGTQGERVQRIAKLAAELAPIVGADP 420 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +L+KADL TE+V EFPELQG +G+ YA LQNEN S A EEH KP+GP + V Sbjct: 421 EHATRAAMLAKADLTTEVVGEFPELQGVMGRIYAGLQNENASVALAAEEHYKPQGPSDQV 480 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-LSQ 527 PT+ +SI V+LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRI++EN +D+ ++ Sbjct: 481 PTDPVSIAVALADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRILVENGVDLRVVTS 540 Query: 528 FIEDQNLILFF----------------------HDRLKLY------LHDRDIRHDLI--E 557 E +L+ F ++L+ D+ D++ + Sbjct: 541 SGETASLLRFIGTSVADHLVGLQMRGLAKIIADLEKLESKGALPSGYRDQ-FAKDMVSRK 599 Query: 558 AI-----------LRPENDNLLTIVDLIKH----------LNEFFSSAKGEKFLLSAKRI 596 A +D L D +K L + + + + L +R+ Sbjct: 600 AAENFINETADLSWAAASDLLSFFHDRLKVYLRDQGARHDLIDAVITPQSDDLLDITRRV 659 Query: 597 ----------------------FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 ILA EEKK ++ I P L+AE+ L+ ++ Sbjct: 660 AALGAFLDTDDGKNLLAGTKRGANILAAEEKKGTAVAETIDPALFELDAERNLFNAVTQS 719 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++++ Y L ++ EP++ FF+ VLVN DD VR NRL+LL I++ Sbjct: 720 VSAAIQVIENEDYAAAMSALATLREPVDSFFEAVLVNADDEAVRANRLALLAMIRHATGA 779 Query: 695 VINVQKI 701 V + +I Sbjct: 780 VADFSRI 786 >gi|332163498|ref|YP_004300075.1| glycyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607999|emb|CBY29497.1| glycyl-tRNA synthetase beta chain [Yersinia enterocolitica subsp. palearctica Y11] gi|325667728|gb|ADZ44372.1| glycyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861718|emb|CBX71892.1| glycyl-tRNA synthetase beta subunit [Yersinia enterocolitica W22703] Length = 689 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 200/720 (27%), Positives = 328/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELNSANLPHGEVVWYAAPRRLAVKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRVIRGHRFMGESEFALDNADQYPQVLLERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 TAGHLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RI++E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRILVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K +++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDKLNDHVRASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFESVMVMDEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|154247257|ref|YP_001418215.1| glycyl-tRNA synthetase, beta subunit [Xanthobacter autotrophicus Py2] gi|154161342|gb|ABS68558.1| glycyl-tRNA synthetase, beta subunit [Xanthobacter autotrophicus Py2] Length = 733 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 300/758 (39%), Positives = 419/758 (55%), Gaps = 84/758 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+ L ++ L E G++Y+ + + TP RL L + GL Sbjct: 1 MPDLLIELFSEEIPARMQAQAADGLKKLVTDALVERGLLYEGAKAFVTPRRLALAVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE+ GPRVGA AI GFL+S GL ++ ++ DPKKGD Y+AV+ KP R Sbjct: 61 GRQADQREEKKGPRVGAPDGAIAGFLKSAGLSSLDQATVQSDPKKGDFYVAVVEKPGRPT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ I+P I+ PWPKSMRW + + W+RPL SI+ AE + +++ ++ Sbjct: 121 PEVIAEIIPAIIRSFPWPKSMRWGSG-----SLRWVRPLHSIVATFGAEGDEPEVVRFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I NITYGHRF AP PI V+ LD ++ LE A V++D + R++ IL DA A A Sbjct: 176 DGIVSSNITYGHRFLAPAPITVKRLDDWMAKLEAAKVVVDRDRRKDIILADAKNEAFANR 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 LELVED+ LL+E+ GLVEW V MG+F++++L +P+E+IR TI+ NQKCFV + G L Sbjct: 236 LELVEDEGLLDEVAGLVEWPVVLMGAFEERFLDIPDEVIRATIRANQKCFVLKDPATGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN F+L+SN+ ASDGGAAIV GN RV+ ARL DA FW D+ N Sbjct: 296 ANRFLLISNLVASDGGAAIVAGNERVIRARLSDAKFFWDTDRVNG--------------- 340 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L+ RM R + FH K+G+Q ER+ RIR L +IA + A AL + A + K Sbjct: 341 -----LESRMPRFQ--SITFHEKLGSQAERIERIRRLAVEIAPKVGAPAALAEDAALFCK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G YA + A EEH KP+GP + VPT +S+ V+L Sbjct: 394 ADLLTEVVGEFPELQGLMGHYYAQGEGLAPEVAAACEEHYKPQGPGDRVPTAPVSVAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF-- 537 ADK+DTL+ FWAI+EKP+GSKDPYALRRA LG+IRI+LEN + + L+ + Sbjct: 454 ADKIDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIVLENGLRLRLADVFTGHFKLADQD 513 Query: 538 ------------------------------------FHDR----------------LKLY 545 F DR LK++ Sbjct: 514 IIRTANEARIKRVEDALGDQGGAVVGNDVAMWVSRKFGDRTADSRSIDLLSFFADRLKVH 573 Query: 546 LHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 L + RHDL++A+ D+L +V+ + L F + G L +R IL IEE Sbjct: 574 LREHGARHDLVDAVFALEGQDDLFLLVERMTALARFLDTEDGRTLLAGYRRAVNILRIEE 633 Query: 605 KKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 KK+ R + L AE+RL I + ++ + + L + P++ Sbjct: 634 KKDGRAFAGPTDATLLKEPAEERLADAIEQVKGRVAAAVAAEDFETAMTALADLRGPVDA 693 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD V VN D +R+NRL LL I+ + + +I Sbjct: 694 FFDAVTVNDQDPALRENRLKLLDEIRAATRGIADFDRI 731 >gi|300719083|ref|YP_003743886.1| glycyl-tRNA synthetase beta subunit [Erwinia billingiae Eb661] gi|299064919|emb|CAX62039.1| Glycyl-tRNA synthetase beta subunit [Erwinia billingiae Eb661] Length = 689 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 205/721 (28%), Positives = 330/721 (45%), Gaps = 61/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P + AE + L G+ + + Y P RL L + LS Sbjct: 4 KTFLVEIGTEELPPKALRNLAESFAAHFTAELDTAGLTHGAVSWYAAPRRLALKVANLSA 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E+ GP + G KA +G+ R G+ ++ D KG+ L + Sbjct: 64 AQPDREVEKRGPAIAAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLLYRAQ 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L +V ++ K+P PK MRW + ++RP+ ++ +L ++ Sbjct: 122 VTGESAQSLLPAMVSTSLAKLPIPKLMRWGDSD-----VQFVRPVHTVTLLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAH 233 + + + G GHRF + + D Y + LE V D E R+ I DA Sbjct: 172 SLPATILGVASGRTIRGHRFMGEPEFTIDNADQYPQILLERGKVQADYEVRKAQIKADAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 AAAREIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V+NI + D I+ GN +VV RL DA F+ D+ Sbjct: 292 DTAGKLLPNFIFVTNIVSKDP-QQIISGNEKVVRPRLADAEFFFNSDRK----------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV R Sbjct: 340 ---------KRLEDNLPRLET--VLFQKELGTLRDKTDRIQALAGWIAGQIGADVNHATR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 449 ACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAV 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F R + + + D I+A+L +K ++ Sbjct: 509 RLYGSKLSNGKVVDEVIDFMLGRFRTWYQEEGHSVDTIQAVLARRPTRPADFNARMKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA K ++ +S L E +L +S + + Sbjct: 569 HFRTLEEAATLAAANKRVSNILA---KATEPLNDSVSASLLKENEEIQLATYVSALTSKL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q RY L + ++ FF++V+VN ++REVR NRL+LL ++ + L V ++ Sbjct: 626 QPYFAEGRYQDALIELAQLRTAVDNFFEKVMVNAEEREVRINRLTLLAKLRELFLQVADI 685 Query: 699 Q 699 Sbjct: 686 S 686 >gi|89070594|ref|ZP_01157878.1| glycyl-tRNA synthetase beta subunit [Oceanicola granulosus HTCC2516] gi|89043811|gb|EAR50012.1| glycyl-tRNA synthetase beta subunit [Oceanicola granulosus HTCC2516] Length = 694 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 272/720 (37%), Positives = 414/720 (57%), Gaps = 47/720 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E+ SEEIPARMQ KA++DL ++ L E G+ Y + + TP RL L+++GL+ Sbjct: 1 MPDLLIELLSEEIPARMQAKASDDLKKMVTDGLVEAGLTYASAAAFATPRRLVLHVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ +ER GP+VGA KA++GF R G+ + + +D KG + AV+ + R Sbjct: 61 AESPDTRDERRGPKVGAPDKAVEGFCRGAGVDRAALEE--RDTGKGAFWFAVIERKGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ ++ PWPKSMRW + + W+RPL SILCIL +++ +++ L++ Sbjct: 119 ADIVAEVLETTVRGFPWPKSMRWGSG-----SLRWVRPLSSILCIL-SDEGGAEVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 G +T GHRF AP I V + Y L+ A V+L P+ R AI NDA +A + G Sbjct: 173 DGQRAGAVTRGHRFMAPGEISVGDFEDYEAKLKRAKVMLRPDERAEAIWNDATNMAFSAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG + +L LP E+++ ++K +QK F R +G + Sbjct: 233 LEVVEDKGLLREVAGLVEWPVVLMGEIGESFLGLPPEVLQTSMKEHQKFFSVRAPDGRIT 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+NI+ +D GA I+ GN +V+AARL DA FW+ D + E+ ++ L+ Sbjct: 293 -RFVTVANIETADDGATILAGNQKVLAARLSDAKFFWENDLR-------VAEAGMEPWLE 344 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V F ++G+Q +R+ RI L + +A + AD L ++A ++KA Sbjct: 345 ------------ALGNVTFERRLGSQQDRIGRIATLARALAGPVGADPELAEKAARVAKA 392 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y+ A EEH P GP + VPT +S+ V+LA Sbjct: 393 DLSSEMVYEFPELQGLMGRYYSAAAGLPDEVARACEEHYSPLGPSDAVPTAPVSVAVALA 452 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL------ 534 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + + L D Sbjct: 453 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLTNDLRLSLKDIFRDSAQIVSEQL 512 Query: 535 -----------ILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFS 582 + FFHDRLK++L D IRHD+I+A+ P ND+L +V + L++ Sbjct: 513 QGDITTDTDDLLAFFHDRLKVHLRDEGIRHDVIDAVTAMPGNDDLALLVARARALSDVLK 572 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + GE L +R IL+ E + E S ++ +AEK L+A + + I ES Sbjct: 573 TDDGENLLQGFRRANNILSQAEAADGVEYSYGADVKFAESDAEKALFAALDEAEPKIAES 632 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + + PI+ FF+ V VN D++ +R NRL+LL I+ I L V ++ ++ Sbjct: 633 LAREDFAAAMAAMAGLRGPIDAFFEDVQVNSDNQVLRRNRLNLLSRIRQICLSVADLTRV 692 >gi|46143625|ref|ZP_00134813.2| COG0751: Glycyl-tRNA synthetase, beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209267|ref|YP_001054492.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae L20] gi|166227908|sp|A3N3A1|SYGB_ACTP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|126098059|gb|ABN74887.1| Glycyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 689 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 348/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + + ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQADLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + Sbjct: 65 QPSKEIEKRGPAVSAAFDADGKPTKAAEGWARGCGITVDQADRIATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ +E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E+ MV+ D R+ IL + Sbjct: 173 IEGEILGVKINNVIRGHRFLGEREFTISHADEYLTALREKGMVVADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGNKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS+EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISIEIDRTLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|165977240|ref|YP_001652833.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|238687522|sp|B0BSX5|SYGB_ACTPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|165877341|gb|ABY70389.1| glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 689 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 345/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRSLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDSFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|99082150|ref|YP_614304.1| glycyl-tRNA synthetase subunit beta [Ruegeria sp. TM1040] gi|123252189|sp|Q1GE74|SYGB_SILST RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|99038430|gb|ABF65042.1| Glycine--tRNA ligase [Ruegeria sp. TM1040] Length = 687 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 277/710 (39%), Positives = 405/710 (57%), Gaps = 34/710 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +A EDL + L E G+ Y TP RL L ++GL Sbjct: 1 MADLLIELFSEEIPARMQARAGEDLKKRMTDGLVEAGLTYAGAHALTTPRRLTLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA +KAI+GFLR GL + +D KG VY A + KP R Sbjct: 61 DHSPTVREERKGPKVGAPEKAIEGFLRGAGLTRDQLEE--RDTPKGAVYFATIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW A W+RPL SILC+L E+ +++ L++ Sbjct: 119 AEIIAEVLEDTIRNFPWPKSMRWGAG-----ALRWVRPLHSILCLLTREE-GSEVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ T GHRF AP V + Y L+ A V+LDP+ R AI DA A A G Sbjct: 173 DGVTSGDSTAGHRFMAPARFAVTGFEDYAAKLKRAFVVLDPKEREAAIWQDATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V+DK LL E+ GLVEW V MGS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LEVVDDKGLLAEVAGLVEWPVVLMGSIDAEFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + ++ Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRIAKSEVGVEGWLESLG-- 350 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 351 ---------------NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAAKVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAQAAGLPQEVANACELHYSPLGPSDDVPTEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------N 533 DK+DTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + + Sbjct: 456 DKIDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLSNDVRVGLKEVFAKAYEGADGSD 515 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK++L D+ IRHD+I+A + +D+L +V + L +F S GE L Sbjct: 516 LLSFFHDRLKVFLRDQGIRHDVIDACIAMEGSDDLTLLVKRARALEDFMKSEDGENLLQG 575 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL+ E+K+ E S +++ AE L+ ++ I +++ + + Sbjct: 576 FKRANNILSQAEEKDGVEYSFGADKKFVEDPAEAALFEALAANEAAISTAIEAEDFAAAM 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ P++ FF+ V VN D+ VR NRL+LL I+ + V ++ +I Sbjct: 636 GGMAALRAPVDAFFEAVQVNSDNPVVRRNRLNLLSQIRKVCGQVADLSRI 685 >gi|303250056|ref|ZP_07336258.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253488|ref|ZP_07535359.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651119|gb|EFL81273.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859167|gb|EFM91209.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 689 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 347/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRR+ LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRSALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGNKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS+EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISIEIDRTLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDHLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|307257903|ref|ZP_07539658.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863590|gb|EFM95518.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 689 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 345/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKEIEKRGPAVSAAFDADGKPTKAAEGWARGCGITVDQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVELPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD A +RA Sbjct: 338 ------LKQRLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLSLDLEDLVRKSAV 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDCTLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|293391259|ref|ZP_06635593.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951793|gb|EFE01912.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 693 Score = 785 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 351/725 (48%), Gaps = 67/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ ++N+ + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATAFADNVQAELNQAGLAFENIEWFAAPRRLAVKVLALATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QPSKEIEKHGPAVSAAFDAEGNPTKAAEGWARGCGITVDQAERLASD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLADIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTIRGHRFLGEREFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR- 293 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPLYE 292 Query: 294 ----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 ++G L FI VSNI D +AI++GN +VV RL DA F+K D Sbjct: 293 KTEGDKDGKLLPHFIFVSNINPDDP-SAIIEGNEKVVRPRLTDAEFFFKTD--------- 342 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A Sbjct: 343 -----------LKQKLVDRLPRLET--VLFQQQLGTLRDKTDRIEQLAGEIAKQIGADEA 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P Sbjct: 390 KAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + ++ +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 KSLVASSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLV 509 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + +++ F R + + D I D+I+A+L + Sbjct: 510 KKSAALFGDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + ++ F + E + KR+ ILA + EI+L + AEK L + Sbjct: 570 RAVSHFRTLDSAEALAAANKRVANILAKADVAIGEINLTA----CVEPAEKALAEAVLAL 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 T +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L Sbjct: 626 QTEVQPLIAKGEYTAVLDKLANLRTPVDNFFDNVMVNAEDPALRQNRLAILNTLQGLFLQ 685 Query: 695 VINVQ 699 V ++ Sbjct: 686 VADIS 690 >gi|238787798|ref|ZP_04631595.1| Glycyl-tRNA synthetase beta subunit [Yersinia frederiksenii ATCC 33641] gi|238724141|gb|EEQ15784.1| Glycyl-tRNA synthetase beta subunit [Yersinia frederiksenii ATCC 33641] Length = 689 Score = 785 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 203/720 (28%), Positives = 327/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVIWYAAPRRLALKVINLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVEQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + D Y + L E V+ D E R++ I DA Sbjct: 173 IPGTVLGIDSDRVIRGHRFMGEAEFTLDHADQYPQVLLERGKVIADYELRKSIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 TAGNLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGAKLTNAKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E I+ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETIDEFFESVMVMAEDDAVRINRLTLLSKLRELFLQVADIS 686 >gi|68249510|ref|YP_248622.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 86-028NP] gi|81336063|sp|Q4QLY5|SYGB_HAEI8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|68057709|gb|AAX87962.1| Glycyl-tRNA synthetase beta chain [Haemophilus influenzae 86-028NP] Length = 722 Score = 785 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 210/754 (27%), Positives = 342/754 (45%), Gaps = 96/754 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLVHRTKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 KGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF +Q D Y + L + V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFDIQHADQYPQLLRDKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGRLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F ++GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L+ I Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLNDIISKAFD 509 Query: 533 -----------------------------------------------NLILFFHDRLKLY 545 ++ F R + + Sbjct: 510 LYKELDNERLRNAPIAKTRGGFSEYPEGYVSFFTRGDDLVPKQKILDEVVDFMLGRFRAW 569 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 D I D+I+A+L ++ ++ F + E + KR+ ILA Sbjct: 570 YQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKAGA 629 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 EI+L + AEK L + T +Q + Y + D L ++ P++ FF Sbjct: 630 AIGEINLTA----CVEPAEKALAEAVLALRTEVQPLIAQGDYTAVLDKLANLRAPVDSFF 685 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D V+VN +D +R NRL++L ++ + L V ++ Sbjct: 686 DNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 719 >gi|238750267|ref|ZP_04611769.1| Glycyl-tRNA synthetase beta subunit [Yersinia rohdei ATCC 43380] gi|238711500|gb|EEQ03716.1| Glycyl-tRNA synthetase beta subunit [Yersinia rohdei ATCC 43380] Length = 689 Score = 785 bits (2028), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 329/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL + + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVIWYAAPRRLAVKVLNLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDEAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGQSAQLLLAGMVNTALSKLPIPKLMRWGDKET-----QFVRPVHTVTLLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I + I + GHRF + + D Y + L E V+ D E R+ I DA Sbjct: 173 IPGTVLGIDSDRVIRGHRFMGEAEFTLDNADQYPQVLMERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F Sbjct: 293 TAGNLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFF------------------ 333 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN DL K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 334 --FNTDLKKRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNAKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTKPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K +++ + L AE +L + ++ Sbjct: 570 FRTLDAAATLAAANKRVSNILA---KSTDKLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PVFAAGQYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|304415609|ref|ZP_07396219.1| glycine tRNA synthetase beta subunit [Candidatus Regiella insecticola LSR1] gi|304282541|gb|EFL91094.1| glycine tRNA synthetase beta subunit [Candidatus Regiella insecticola LSR1] Length = 690 Score = 785 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 334/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + A+ + I L + + + N++ + TP RL L + LS Sbjct: 6 TFLVEIGTEELPPKALRSLAQSFADHFITELNDAHLSHGNLKWFATPRRLALQVTDLSTT 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++I E+ GP + G KA + + G+ +++ + KG+ L + Sbjct: 66 QADRIIEKRGPAITQAYDALGKATKAAESWACGCGITLDQAERLRTE--KGEWLLYRAQI 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L ++ Sbjct: 124 KGQSATSLLPRLVNTALSKLPIPKLMRWGDKST-----QFVRPVHTVTLLL-----GNEL 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I L + + GHRF + + + + Y + L V+ D E R+ I + + Sbjct: 174 IPGTLLGVDSARLIRGHRFMGEATLTLDNAEQYRQILLTRGSVIADYETRKAQIKSQIEQ 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G D+DLLEE+ LVEW V SF+KK+L +P E + T+K +QK F Sbjct: 234 TAQTLGGIADIDEDLLEEVTSLVEWPVVLTASFEKKFLLVPAEALVHTMKADQKYFPVYD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L++ FI V+NI + D I+ GN +V+ RL DA F+ D+ Sbjct: 294 QVGQLSSNFIFVANIASKDP-QQIIAGNEKVIRPRLADAEFFFNTDRQ------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 KPL + RL+ V+F ++GT ++ RI L IA+ I AD+ RA Sbjct: 341 --------KPLLDYLPRLE--SVLFQQQLGTLRDKTDRISALSGWIAEQIGADIPHAIRA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF E QG +G YA E+ A+ E PR + +P+ +S Sbjct: 391 GLLSKCDLMTNMVFEFTETQGMMGMHYARHDGEDEQVALALYEQYLPRFSGDLLPSKPVS 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +++ADK+DTL+ + I + P G KDP+ALRRA LG++RII NK+ + L + Sbjct: 451 CALAIADKIDTLVGIFGIGQPPKGDKDPFALRRAALGVLRIITLNKLPLDLQTLSQQAER 510 Query: 535 I---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + + D I+A+L IK ++ Sbjct: 511 LYGSKLINKKGVNEVVEFMLGRFRAWYQEEGHSVDTIQAVLACHPTKPADFDARIKAVSH 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K + ++ L AE L + ++ Sbjct: 571 FRTLDAAVALTAANKRVSNILA---KSTDILPDDVDVSLLTDPAELTLATDLIALSDQLE 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY + L ++ E ++ FFD V+V V+D +R NRL+LL ++ + L + ++ Sbjct: 628 PLFASGRYQEALSKLAALREVVDRFFDNVMVMVEDNSMRINRLTLLNKLRALFLKIADIS 687 >gi|170718076|ref|YP_001785112.1| glycyl-tRNA synthetase subunit beta [Haemophilus somnus 2336] gi|189082269|sp|B0UWA9|SYGB_HAES2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|168826205|gb|ACA31576.1| glycyl-tRNA synthetase, beta subunit [Haemophilus somnus 2336] Length = 688 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEQELNQAGLAFEKVEWFAAPRRLAVKVLGLAEA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKQVEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ A+ +P PK+MRW ++RP+ ++ + A+ + Sbjct: 123 EGQPTKNLLVGIIDKALAGLPIPKTMRWGDKTE-----QFVRPVHTVTLLFGAD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF + D Y + L+E V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTVRGHRFLGEREFSLDHADQYPQLLKERGSVVADFNERKALILATSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G +++LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEELLEEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPDDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD RA Sbjct: 338 ------LKQKLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADQTKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEDVAVALNEQYMPRFAGDTLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +V+LADK+DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKIDTLTGIFGIGQSPKGSADPFALRRAALGCLRIIVEKNLPLDLVDIVAKATA 509 Query: 535 I---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + I D+I+++L ++ ++ Sbjct: 510 LFGDKLTNKNVVDEVVDFMLGRFRAWYESEGIAVDVIQSVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI L + + AEK L + +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADIAIGEIDLGV----CVESAEKTLAEAVIALKGEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ +PI+ FFD V+VNV+++ +R NRL++L ++N+ L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRQPIDAFFDGVMVNVEEQTLRQNRLAILSTLQNLFLQVADIS 685 >gi|113460624|ref|YP_718690.1| glycyl-tRNA synthetase subunit beta [Haemophilus somnus 129PT] gi|123131976|sp|Q0I273|SYGB_HAES1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|112822667|gb|ABI24756.1| glycyl-tRNA synthetase beta chain [Haemophilus somnus 129PT] Length = 688 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 206/720 (28%), Positives = 348/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVEQELNQAGLAFEKVEWFAAPRRLAVKVLGLAEA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKQVEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERLSTD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L +++L I+ A+ +P PK+MRW ++RP+ ++ + A+ + Sbjct: 123 EGQLTKNLLVGIIDKALAGLPIPKTMRWGDKTE-----QFVRPVHTVTLLFGAD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF + D Y + L+E V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTVRGHRFLGEREFSLDHADQYPQLLKERGSVVADFNERKALILATSRE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G +++LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEELLEEVTSLVEYPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPDDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ R+ RL+ V+F ++GT ++ +RI L +IA I AD RA Sbjct: 338 ------LKQKLEDRLPRLET--VLFQQQLGTLRDKTARIEALAGEIAAQIGADQTKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEDVAVALNEQYMPRFAGDTLPNSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +V+LADK+DTL + I + P GS DP+ALRRA LG +RII+E + + L+ + Sbjct: 450 CSVALADKIDTLTGIFGIGQSPKGSADPFALRRAALGCLRIIVEKNLPLDLADIVAKATA 509 Query: 535 I---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + I D+I+++L ++ ++ Sbjct: 510 LFGDKLTNKNVVDEVVDFMLGRFRAWYESEGIAVDVIQSVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI L + + AEK L + +Q Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADIAIGEIDLGV----CVESAEKTLAEAVLALKGEVQ 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + D L ++ +PI+ FFD V+VNV+++ +R NRL++L ++N+ L V ++ Sbjct: 626 PLIAQGDYTAVLDKLANLRQPIDAFFDGVMVNVEEQTLRQNRLAILSTLQNLFLQVADIS 685 >gi|126725590|ref|ZP_01741432.1| glycyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2150] gi|126704794|gb|EBA03885.1| glycyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2150] Length = 685 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 271/710 (38%), Positives = 390/710 (54%), Gaps = 36/710 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA DL ++ L + G+ Y + + TP RL L ++GL Sbjct: 1 MPDLLLELFSEEIPARMQTRAANDLKKLVTDGLVKSGLTYASAEAFSTPRRLTLVVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GPRV A KAI+GFLR GL D +D KKG VY A + K R Sbjct: 61 AESPMIVEERKGPRVDAPAKAIEGFLRGAGLT--RDQLDVRDEKKGQVYFARIEKAGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + ++ I+ PWPK+MRW T W+RPL SILC+L +++A +++ D+ Sbjct: 119 PIIAAEVITDTIRNFPWPKAMRWGTGE-----LRWVRPLHSILCVL-SDEAGSEVVPFDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N T GHRF V D Y L + V+L R + I DA A A G Sbjct: 173 DGIAANNTTEGHRFMGTGRFSVTDFDDYATKLRQNHVILRATDRADHIWADATNQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V+DK LL E+ GLVEW V MG+ D +L LP E+++ ++K +QK F + + Sbjct: 233 LEVVDDKGLLTEVAGLVEWPVVLMGAIDDDFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N D GA I+ GN +V++ARL DA FW+ D Sbjct: 293 EKFITVANRDTKDNGATILAGNQKVLSARLADAKFFWENDLRVA---------------- 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + L+ +V FH K+GTQ R+ RI L ++IA ++ AD + + A ++KA Sbjct: 337 -KSDIGSWVKSLE--NVTFHNKLGTQSARIDRIATLAREIAPMVGADAEVAENAARVAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + + +EH P GP ++VP+N +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYATAAGMSDDIALSAQEHYSPLGPSDDVPSNPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QN 533 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR+ L+N + + L ++ Sbjct: 454 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLTLDNDLSMNLKSVFARGYENANAED 513 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK YL D+ IRHD+I+A L ND+L +V L + + GE L Sbjct: 514 LLSFFHDRLKTYLRDQGIRHDVIDACLAMANNDDLSLLVKRATALADLLKTDDGENLLQG 573 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL E K+ ++ +AEK L+A + I+ ++ + Sbjct: 574 YKRANNILTQAETKDGVSYEYGADIKFAEDDAEKALFAALDTADAAIKPALVADDFAAAM 633 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF+ V VN D+ VR NRL+LL I+ I ++ ++ Sbjct: 634 SAMAALRAPIDGFFEAVQVNSDNEIVRRNRLNLLHRIRAICTSTADLSRV 683 >gi|251787694|ref|YP_003002415.1| glycyl-tRNA synthetase subunit beta [Dickeya zeae Ech1591] gi|247536315|gb|ACT04936.1| glycyl-tRNA synthetase, beta subunit [Dickeya zeae Ech1591] Length = 694 Score = 784 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 210/729 (28%), Positives = 339/729 (46%), Gaps = 68/729 (9%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L G+ YQ++ + P RL L + G Sbjct: 1 MTDKTFLVEIGTEELPPKALRTLAEAFAANFTAELDAAGLGYQSVGWFAAPRRLALKVAG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 61 LSASQPDREVEKRGPAIAQAFDAEGKATKAAEGWARGCGITVEQAERLTTD--KGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L Sbjct: 119 RAQVKGEAAQTLLPGMVSTALAKLPIPKLMRWGDNDT-----QFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I + I + GHRF + + D Y + LE VL D E R+ I Sbjct: 169 GDELISGTVLGIDSARVIRGHRFMGEPEFTIDNADQYPQILLERGKVLADYEARKAKIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEDAARKIGGNADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDNAGKLLPNFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFFFNTDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ + RL+ V+F ++GT + RI L +A+ I ADV Sbjct: 340 ------------KRLEDHLPRLET--VLFQQQLGTLRNKTDRIAALTGWVAEQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 AKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ + L E Sbjct: 446 SAVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKRLPLDLQTLTE 505 Query: 531 DQ--------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + ++I F R + + + D I+A+L Sbjct: 506 EAVRLYGDKLSTINAGNANVVDDVIEFMLGRFRAWYQEEGHSVDTIQAVLARRPTRPADF 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +K ++ F + + E + KR+ ILA K ++ + L E +L Sbjct: 566 DARVKAVSHFRTLEQAEALAAANKRVSNILA---KSTETLNDSVQAALLKENEEIQLATY 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ + + RY + L + E ++ FFD+V+VN D+ +VR NRL+LL ++N Sbjct: 623 VTALTSKLAPWFAEGRYQEALAELAQLRESVDNFFDKVMVNADEAQVRINRLTLLNELRN 682 Query: 691 IILIVINVQ 699 + L V ++ Sbjct: 683 LFLKVADIS 691 >gi|33152920|ref|NP_874273.1| glycyl-tRNA synthetase subunit beta [Haemophilus ducreyi 35000HP] gi|71153558|sp|Q7VKG6|SYGB_HAEDU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|33149145|gb|AAP96662.1| glycyl-tRNA synthetase beta subunit [Haemophilus ducreyi 35000HP] Length = 688 Score = 784 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 211/720 (29%), Positives = 352/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + K A + + L++ G+ ++ + + TP RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKKLATAFADNIQAELEQAGLAFEKIEWFATPRRLAVKVLSLAIA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP VG+ KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKEIEKRGPAVGSAFDADGQPTKAAEGWARGCGISVEQADRVVTD--KGEWLVHRAVV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +D+L +V A+ K+P K MRW+ +IRP+ ++ +L ++ Sbjct: 123 EGKPTKDLLVDMVASALAKLPIAKPMRWADK-----TVQFIRPVHTVTLLL-----GNEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ ++ I N+ GHRF ++ D Y + L + V+ D R+ IL DA Sbjct: 173 IEGEILGITIANVVRGHRFLGESQFQIAHADEYPQILRDKGAVIADFAERKAIILRDAQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G + DLLEE+ LVE+ V + F++++L +P E + T+K +QK F Sbjct: 233 KAAALGGVADIEDDLLEEVTSLVEYPNVLVAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L FI VSNI D +AI++GN +VV RL DA F+K D Sbjct: 293 KEGNLLPHFIFVSNINPQDP-SAIIEGNEKVVRPRLSDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L ++ RL+ V+F ++GT ++ RI L IA+ I ADV RA Sbjct: 338 ------LKQRLVDQLPRLET--VLFQQQLGTLRDKTDRIEQLSGVIAEQIGADVQKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E PR + +PT+ ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDALPTSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK+DTL + I + P G KDP+ALRRA LG++RII+E K+ + L +E Sbjct: 450 CSVALADKIDTLTGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKKLPLDLVHLVEKSTG 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNKAVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA + EI+L + E+ L + ++ Sbjct: 570 FRTFESAEALAAANKRVTNILAKADIAIGEINL----SACVEPTERALAEAVLALKDEVR 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L ++ P++ FFD V+VN +D +R NRL++L ++++ L V ++ Sbjct: 626 PLIAKANYTAVLTQLANLRTPVDNFFDHVMVNAEDPSLRQNRLAILSTLQSLFLEVADIS 685 >gi|183597049|ref|ZP_02958542.1| hypothetical protein PROSTU_00285 [Providencia stuartii ATCC 25827] gi|188023709|gb|EDU61749.1| hypothetical protein PROSTU_00285 [Providencia stuartii ATCC 25827] Length = 689 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 338/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + L+ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSADIAHGEVSWFAAPRRLALKVAALADS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 SP++ E+ GP + G KA +G+ R G+ ++K D KG+ L + Sbjct: 65 SPDREVEKRGPAISAAFGADGQPTKAAEGWARGCGISVDQAERLKTD--KGEWLLYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L +V ++ K+P PK MRW + ++RP+ ++ +L ++ + Sbjct: 123 KGVAVSELLVDMVSRSLAKLPIPKLMRWGDKET-----HFVRPVHTVTLLLGSD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 +D ++ I G GHRF + D Y L E V+ D E R+ I DA + Sbjct: 173 VDGEVLGIKSGRTIRGHRFMGESEFTIDHADQYPAILRERGKVIADYEERKAVIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AALALGGKADLTDSLLEEVASLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 NAGNLMPNFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ R+ L +A I ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQQQLGTLRDKTDRLEALSGWVAAKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E+ A++E +PR + +P+ +S Sbjct: 390 GLLAKCDLMTNMVFEFTDTQGVMGMHYARHDGESEDVALALKEQYQPRFAGDALPSTDVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 ++LA+K+DTL + I + P G KDP+ALRRA LG++RII+E + L + E+ Sbjct: 450 AALALAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKGYQLDLVEMTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L + +K + Sbjct: 510 LYGDKLTNKNVVNDVVEFMLGRFRSWYQELGYSIDTIQAVLARRPTSPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ IL+ K N +++ ++ L E +L + ++ Sbjct: 570 FRTLEDAEALAAANKRVSNILS---KSNEKLADKVLASVLKAPQEVKLATHLVVLQEKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y L S+ E ++ FF V+V +D VR NRL+LL ++++ L V ++ Sbjct: 627 PMFAERNYQDALVELASLREVVDAFFADVMVMDEDEAVRINRLTLLSQLRDLFLKVADIS 686 >gi|261867209|ref|YP_003255131.1| glycyl-tRNA synthetase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412541|gb|ACX81912.1| glycyl-tRNA synthetase beta subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 693 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 347/725 (47%), Gaps = 67/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATAFADNVQAELNQAGLAFDKIEWFAAPRRLAVKVLALATQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QPGKEIEKRGPAVSAAFDAEGNPTKAAEGWARGCGITVDQAERLATD--KGEWLVHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLADIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + G GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASGRTIRGHRFLGEREFEIQHADQYPQLLREKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR- 293 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPLYK 292 Query: 294 ----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 ++G L FI VSNI D +AI++GN +VV RL DA F+K D Sbjct: 293 KTEGDKDGKLLPHFIFVSNINPDDP-SAIIEGNEKVVRPRLTDAEFFFKTD--------- 342 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L + L R+ RL+ V+F ++GT ++ RI L IA+ I AD A Sbjct: 343 -----------LKQKLVDRLPRLET--VLFQQQLGTLRDKTDRIEQLAGAIAKQIGADEA 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P Sbjct: 390 KAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + ++ V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 KSLVASAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLV 509 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + +++ F R + + D I D+I+A+L + Sbjct: 510 QKSAALFGDKLTNKNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + ++ F + E + KR+ ILA + EI+L + AEK L + Sbjct: 570 RAVSHFRTLDSAEALAAANKRVANILAKADVAIGEINLIA----CVESAEKNLAEAVLVL 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 T +Q + Y + D L ++ P++ FFD V+VN +D +R NRL++L ++ + L Sbjct: 626 QTEVQPLIAKGEYTAVLDKLANLRTPVDNFFDNVMVNAEDPTLRQNRLAILNTLQGLFLQ 685 Query: 695 VINVQ 699 V ++ Sbjct: 686 VADIS 690 >gi|255263205|ref|ZP_05342547.1| glycyl-tRNA synthetase, beta subunit [Thalassiobium sp. R2A62] gi|255105540|gb|EET48214.1| glycyl-tRNA synthetase, beta subunit [Thalassiobium sp. R2A62] Length = 699 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 280/724 (38%), Positives = 403/724 (55%), Gaps = 50/724 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ KAA+DL ++ L E G+ Y + + TP RL L ++GL+ Sbjct: 1 MSDLLIELFSEEIPARMQAKAADDLKRLVTNGLVEAGLTYASAGAFSTPRRLVLTVEGLN 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KA++GFLRSTGL + +D KKG V+ A++ KP R Sbjct: 61 DRSADVREERKGPRTDAPEKALEGFLRSTGLTKDQLEE--RDDKKGAVWFAIVEKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILCIL AED +++ LD+ Sbjct: 119 SEIVAEVLDATIRNFPWPKSMRWGNG-----SLRWVRPLHSILCILSAED-GAEVVPLDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G++T+GHRF AP IKV + D L++A V+LD R AI DA A A G Sbjct: 173 DGIVSGDVTFGHRFLAPDAIKVVNFDDCSTKLKQAYVVLDASERAEAIWADATNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE++ED+ LL E+ GLVEW V MG K YL LP E+++L++K +QK F + + Sbjct: 233 LEVIEDRGLLAEVAGLVEWPVVLMGPIAKDYLNLPSEVLQLSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI+ +D GA I+ GN RV++ARL D FW+ D + AL+ Sbjct: 293 EQFITVANIETADNGATILAGNGRVLSARLADGKFFWENDLREAKSGMKGWLQALE---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+G+ E++ RI L +A AD + A LSKA Sbjct: 349 ---------------NVTFHNKLGSVAEQIERISDLSGHLAATTGADPVMATTAAQLSKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y+ + + AIEEH P GP ++VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGVMGRYYSAEAGHDAAIGAAIEEHYSPLGPSDDVPTAPVSMAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL---- 536 K+DTL FW I+EKP+GSKDP+ALRRA LG+IR+ +EN + L Q ++ Sbjct: 454 AKVDTLAGFWVIDEKPTGSKDPFALRRAALGVIRLAVENDLRFGLRDVFARQATVVSKAQ 513 Query: 537 -----------------FFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIKHLN 578 F HDRLK+YL DR ++HD+I+A + P ND+L +V + L+ Sbjct: 514 DGSDGVDSDAISDSLMGFVHDRLKVYLKDRGVKHDVIDASVAMPGNDDLSLLVRRAEALS 573 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + GE + KR +L EEKK+ E S ++ + E+ L+A + Sbjct: 574 GFLRTDDGENLVQGFKRANNMLTAEEKKDGVEYSFGADIKFAETDEERALFAALDAGEPA 633 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 I +M + + + + P++ FF V VN D +R NRL+LL I L V + Sbjct: 634 IVAAMGAEDFETAMAAMAQLRGPVDAFFKAVKVNADSDVIRRNRLNLLSRISKTCLSVAD 693 Query: 698 VQKI 701 + ++ Sbjct: 694 LTRL 697 >gi|303253230|ref|ZP_07339379.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248875|ref|ZP_07530887.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302647912|gb|EFL78119.1| glycyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854612|gb|EFM86803.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 689 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 206/720 (28%), Positives = 345/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFKAD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLSLDLEDLVRKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVEDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + T + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRTLLVEAEEKALAEQVISLQTELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|332304394|ref|YP_004432245.1| glycyl-tRNA synthetase, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171723|gb|AEE20977.1| glycyl-tRNA synthetase, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 692 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K A+ + + L + Y ++ + +P RL + + L+ Sbjct: 5 NLLIEIGTEELPPKALCKLAQAFADNMQNALDAAELKYASVEWFASPRRLAVNVIDLAEQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 65 QEDKLIEKKGPAVSVAFDEAGQATKAAQGWARSNGITVEQAERLTTD--KGEWLLFKGES 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 I +L ++ A++K+P PK+MRW + S+ +IRP+ ++ + A+ + Sbjct: 123 KGETISSLLPPMIDGALKKLPIPKAMRWGS-----SSIQFIRPVHTVTILFGAD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ I + GHRFH + + Y+ LE VL D R+ I Sbjct: 173 IKGNILGIDSDRVVQGHRFHGEKQFSLAHANDYLAQLEAHYVLADFAARKAKIQQQVKAT 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + +LL+E+ LVEW V SFD+ +L +P+E + T+K +QK F + Sbjct: 233 AQKENAVADMNDELLDEVTALVEWPVVLTASFDESFLEVPKEALIYTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + F+ V+NI++ D I+ GN +V+ RL DA F+ D+ Sbjct: 293 NGQLKSRFVFVTNIESKDP-KQIISGNEKVIRPRLADAEFFFNTDKK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L V+F ++GT E+ RI L IA ++D+D AL RA Sbjct: 339 -------TTLESRLESLKT--VLFQKQLGTLYEKSQRIAELAGTIASMLDSDAALASRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFP++QG +G YA E+ + A+ E PR + +PT+ IS Sbjct: 390 LLSKTDLMTNMVMEFPDVQGVMGMHYAKNDGESDAVALALNEQYMPRFAGDQLPTSHISS 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADK+DTL+ + I + P G KDP+ALRRA +G++RI +E K+ + L++ ++ Sbjct: 450 AVALADKIDTLVGIFGIGQVPKGDKDPFALRRAAIGVLRISVEMKLPLDLTELVQASIDS 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D++I D+I+A+ I+ ++ Sbjct: 510 FADKLTHVDDLTSQVVDFILGRFRAWYQDQNIDIDVIQAVAARRPTKPADFAARIEAVSG 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + G + KR+ ILA + S I P E E L ++ + Sbjct: 570 FKRLSSGLALASANKRVANILAKNKITG---STNIDPSLFESEHETALADALNSIEATVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ Y + D L ++ ++ FFD V+V +D +VR+NRL+LL ++ + L+V ++ Sbjct: 627 AFVNDANYQGVFDQLATLHVKVDDFFDNVMVMAEDEKVRNNRLALLSKLRTLFLLVADIS 686 >gi|119383292|ref|YP_914348.1| glycine--tRNA ligase [Paracoccus denitrificans PD1222] gi|229558567|sp|A1AZF8|SYGB_PARDP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119373059|gb|ABL68652.1| glycyl-tRNA synthetase beta chain [Paracoccus denitrificans PD1222] Length = 685 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 270/710 (38%), Positives = 409/710 (57%), Gaps = 36/710 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A DL ++ L E G+ Y++ + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARARGDLKKLVTDGLVEAGLTYKSAGAFSTPRRLALAIEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPR A + A++GFLRSTGL +D KKG V+ AV+ KP R Sbjct: 61 AQSPTTREERKGPRTDAPEAALEGFLRSTGLTREQLE--ARDDKKGQVWFAVVTKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ AI+ PWPKSMRW + + W+RPL SI+C+L ++++ ++ L++ Sbjct: 119 AEIVAEVLERAIRDFPWPKSMRWGSG-----SLRWVRPLHSIICLL-SDESGASVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I GN T GHRF AP I V + Y L A V+LD R AI +A LA A G Sbjct: 173 EGIGAGNTTRGHRFMAPDEIAVSGFEDYAAKLRRARVMLDAAEREAAIRQEAANLAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 E+V D+ LL E+ GLVEW MG+ + ++L LP E+++ ++K +QK F R + Sbjct: 233 WEIVPDEGLLSEVAGLVEWPVPLMGAIEDRFLALPPEVLQTSMKEHQKFFSARNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+NI+ D G I++GN RV+AARL DA FW+ D + L+ Sbjct: 293 EGFVTVANIETPDHGETILKGNQRVLAARLSDAAFFWENDLREAKAGMADWAEGLR---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 V F +K+G+Q +R++RI L +IA L+ AD ++A ++K Sbjct: 349 ---------------SVTFQSKLGSQADRIARIAALALEIAPLVGADADQAEQAARIAKL 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA+ DA +H P GP + VP+ +S+ V+LA Sbjct: 394 DLRSAMVGEFPELQGIMGRYYALEAGLPEPVADAARDHYSPLGPSDAVPSAPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QN 533 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + L Q + Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLLLVNGVRANLGQTFAKARPDADAAD 513 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ FFHDRLK++L D+ +RHD+I+A+L P ND+L+ +V+ L++ + G L Sbjct: 514 LLAFFHDRLKVHLRDQGVRHDIIDAVLSMPGNDDLVLLVNRATALSDVLKTEDGTNLLQG 573 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR ILA E+ + E S P++ + E+ L+A + I+E++ + + Sbjct: 574 LKRAGNILAQAEEMDGVEYSFGADPKFAETDEERTLFAALDKAEPAIREAVRLEDFQAAT 633 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + S+ PI+ FF+ V +N D++ +R NRL+LL I++ ++ + +I Sbjct: 634 QGIASLRAPIDAFFEAVQINSDNQILRRNRLNLLSRIRDAGRLIADFGRI 683 >gi|307262297|ref|ZP_07543946.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306868060|gb|EFM99887.1| Glycyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 689 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 342/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ ++ + + P RL + GL Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLVTA 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATD--KGEWLVHRAVI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++ +P PK MRW ++RP+ ++ E + Sbjct: 123 EGQPTKNLLVDIISRSLANLPIPKMMRWGDKTE-----QFVRPVHTVTLFFGGE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + N+ GHRF + D Y+ L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEEDLLDEVTSLVEFPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPEDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADETKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L + Sbjct: 450 CSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAA 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K EIS EI L+ EK L + + Sbjct: 570 FRTLDSAEALAAANKRVSNILA---KVEGEISTEIDRTLLVEAEEKALAEQVISLQMELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y D L S+ E ++ FF++V+VN +D +R NR ++L ++N+ L V ++ Sbjct: 627 PTFANGEYQTALDRLASLRETVDNFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADIS 686 >gi|114797868|ref|YP_759414.1| glycyl-tRNA synthetase subunit beta [Hyphomonas neptunium ATCC 15444] gi|123028308|sp|Q0C4C9|SYGB_HYPNA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114738042|gb|ABI76167.1| glycyl-tRNA synthetase, beta subunit [Hyphomonas neptunium ATCC 15444] Length = 706 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 286/736 (38%), Positives = 410/736 (55%), Gaps = 67/736 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ KA DL L G LKE G+ ++ P RL ++GL Sbjct: 1 MADLLIELFSEEIPARMQAKAEADLLAALTGKLKEAGLAWKTAFAVSGPRRLTAVVEGLD 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE+ GP+VGA ++AI GFLR GL IS+ + DPKKGD Y+A P R Sbjct: 61 ARSADVREEKKGPKVGAPEQAIAGFLRGAGLTDISEASVVSDPKKGDFYVAYSTVPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +DV+ VP I+ WPKSMRW T W+RPL+ I+C+L ++ ++ Sbjct: 121 KDVIAEAVPAIIRDFHWPKSMRWGTGE-----LRWVRPLQRIVCVLDGA-----VVPFEV 170 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAV 239 I GN T GHR H P V Y LE + V+L + RR AIL + + Sbjct: 171 GGITSGNETEGHRVHGRGPYTVTGWADYKSQLEGQGHVVLSRDDRRAAILGGIEKACAKA 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV-TRTREGV 298 GL+ +EDK LLEE+ GL EW V +G D +L LP E+I L+++T+QK F T + G Sbjct: 231 GLQWIEDKGLLEEVTGLAEWPVVVLGQMDPDFLDLPPEVITLSMRTHQKYFAATHAKTGK 290 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FILV+NI A+DGGA I +GN+RV++ARL DA FW++D+ Sbjct: 291 LAPNFILVANIAATDGGAKIAEGNARVLSARLSDARFFWEKDK----------------- 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + PL+ +L + F ++G+ G++V R+ L +++A + AD L +RA L+ Sbjct: 334 ---ATPLEVMGEKLKT--IAFKEELGSLGDKVERVAALARELAPAVGADPGLAERAARLA 388 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA+ E+ DAI +H KP+GP ++VPT+ +SI V+ Sbjct: 389 KADLVSEMVGEFPELQGVMGRYYALAVGEDARVADAIRDHYKPQGPSDSVPTDPVSIAVA 448 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------ 532 LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG++RI LEN + + LS I Sbjct: 449 LADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVVRINLENGVRLKLSNAILKAPLAVRP 508 Query: 533 ------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L+ FF DRLK L D+ RHDLI+A+ D+L+ Sbjct: 509 VVKGGQSDSVRSAASKAIDALIDPTLLSFFADRLKQVLRDQGKRHDLIDAVFALGEDDLV 568 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS-LEISPQYLLL--EAEK 625 IV ++ L F ++ G L +R IL EEKK L + P + AE+ Sbjct: 569 LIVKRVEALAAFLATEDGATLLAGYRRAANILKAEEKKGALPDGLSVDPALIAKGPAAEQ 628 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L+A +++ ++ + + + L + P++ FF+ VLVN D +VR+NRL+LL Sbjct: 629 ALWASLNETTAALEAPLKTEDFAGAMTALAGLRAPVDAFFEDVLVNDSDAKVRENRLALL 688 Query: 686 QYIKNIILIVINVQKI 701 ++ + V + +I Sbjct: 689 IAVRGALHKVADFSRI 704 >gi|293393757|ref|ZP_06638064.1| glycyl-tRNA synthetase [Serratia odorifera DSM 4582] gi|291423584|gb|EFE96806.1| glycyl-tRNA synthetase [Serratia odorifera DSM 4582] Length = 689 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 198/720 (27%), Positives = 324/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFSAELDNANLAHGEVNWFAAPRRLALKVANLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++K D KG+ L + Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLKTD--KGEWLLYRAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGQSAQQLLAGMVSTALSKLPIPKLMRWGDKTT-----QFVRPVHTVTMLL-----GDAL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + I GHRF +++ D Y + LE V+ D R+ I DA Sbjct: 173 IPGTVLGIDSARTVRGHRFMGEAQFTLENADQYPQILLERGKVVADYAARKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAEKIGGKADLSESLLEEVASLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 AAGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L IA I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALSGWIAGQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDALPQSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAAR 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + + D I+A+L +K + Sbjct: 510 LYGSKLTNANVVDDVVEFMLGRFRAWYQEEGHAVDTIQAVLARRPTKPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLEEAAALAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 RY L ++ ++ FF+ V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PFFAEGRYQDALVELAALRATVDEFFESVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 686 >gi|89074697|ref|ZP_01161155.1| glycyl-tRNA synthetase beta subunit [Photobacterium sp. SKA34] gi|89049461|gb|EAR55022.1| glycyl-tRNA synthetase beta subunit [Photobacterium sp. SKA34] Length = 689 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 216/721 (29%), Positives = 341/721 (47%), Gaps = 62/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +E++P AE + LK + + ++ Y P RL L + GL+ Sbjct: 4 KNFLIELGTEDLPPTALRTLAEAFATNFEAELKAADLPHDGIKWYAAPRRLALKVTGLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 NQPDKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVDQAERMVTD--KGEWLLFKQE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + +L + A+ K+P P+ MRW + +IRP+K++ +L ++ Sbjct: 122 VKGQPAQALLPELAAAALAKLPIPRPMRWGDKET-----QFIRPVKTLTMLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ + + GHRF + + D Y LEE V+ D + R+ IL DA Sbjct: 172 LIEGTILGVASARTIRGHRFMGEAEFTIDNADQYPAILEERGKVMADYDARKAIILADAK 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A AVG + DL+EE+ LVEW V SF++++L +P E + T+K +QK F Sbjct: 232 KAAEAVGGIADLEDDLVEEVTSLVEWPVVLTASFEEEFLKVPSEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI VSNI ++D + I+ GN +VV RL DA F Sbjct: 292 DAEGKLVPKFIFVSNIISNDP-SQIISGNEKVVRPRLADAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN DL L R+ +L+ +F ++GT ++ RI L IA I ADV R Sbjct: 334 ---FNTDLKSKLVDRLPQLETA--IFQKQLGTIKDKTDRITELAGYIADKIGADVDNAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 389 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEQEDVALALNEQYMPRFAGDQLPSTPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN D+ L I + Sbjct: 449 SSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYDLDLVDLIAKAH 507 Query: 534 LI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + F R + + D D+I+A+L +K ++ Sbjct: 508 SLFGDKLTNDNVDSDVIEFMLGRFRAWYQDAGFSIDVIQAVLAMHPTQPADFDKRVKAVS 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F E + KR+ ILA K + E+ + L+ AEK L ++ + Sbjct: 568 HFRELDAAESLAAANKRVGNILA---KFDGELPTTVDNSLLVEAAEKELAEKVTAVVAAL 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L S+ EP++ FFD V+V DD +++ NRL+LL ++N L V ++ Sbjct: 625 ESVFAAGDYQTALSELASLREPVDAFFDNVMVMADDEKLKVNRLALLSLLRNQFLKVADI 684 Query: 699 Q 699 Sbjct: 685 S 685 >gi|284008981|emb|CBA75885.1| glycyl-tRNA synthetase beta subunit [Arsenophonus nasoniae] Length = 688 Score = 780 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + Y +P RL L + L+ + Sbjct: 4 TFLVEIGTEELPPKALRLLAESFAANFKHQLTQAELPHGEVLWYASPRRLALKVTDLAAY 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ Sbjct: 64 QADREVEKRGPAISQAFDASGKPTKAAEGWARGCGISVEQVERLVTD--KGEWLFYRATN 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L +V A+ ++P PK MRW + ++RP+ +++ +L +++ Sbjct: 122 EGQAAQVLLGDMVVNALSQLPIPKLMRWGDKET-----QFVRPVHTVIMLL-----GDQL 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ++ ++ + G + GHRF + + S + Y L E V+ D E R+ I + A++ Sbjct: 172 LEGEVLGVQSGRMIRGHRFMGEAELTIDSAEQYPAILRERGKVIADYEERKALIKHQANK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A +G LLEE+ LVEW V F++K+L +P E + T+K++QK F Sbjct: 232 VAQQLGGTAELSDSLLEEVTSLVEWPVVLNAKFEQKFLSVPAEALVHTMKSDQKYFPVYD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++S+ IV GN +V+ RL DA F+K D Sbjct: 292 KVGNLMANFIFVANIESSEP-QQIVAGNEKVIRPRLADAEFFFKTD-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L++ + RL+ V+F ++ + ++ R+ VL IA I ADV RA Sbjct: 337 ------CKKRLEEHLPRLET--VLFQKQLDSLRDKTDRLEVLAGWIAAKIGADVNHATRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E AI+E +PR + +PTN ++ Sbjct: 389 GLLSKCDLMTNMVFEFTDTQGVMGMHYARRDGEAEEVALAIKEQYQPRFAGDQLPTNPVA 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 + ++LADK+DTL+ + I + P G KDP+ALRRA LG++RII+E D+ L + Sbjct: 449 VALALADKMDTLVGIFGIGQPPKGDKDPFALRRAALGVLRIIVEKGYDLDLLALTQQTAQ 508 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + ++ R D I+A+L +K + Sbjct: 509 LYGDKLTNKNVIDDVVEFMLGRFRAWYQEQGYRIDTIQAVLARRPTKPADFDARVKAVTH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E KR+ IL K + +++ ++ L E L A + + Sbjct: 569 FRTLEAAEALAAVNKRVANILT---KSDEKLNDNVAASVLKAPEEVTLAAHLVVLQDKLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y L S+ E I+ FFD V+V D++VR NRL+LL ++++ L V ++ Sbjct: 626 PLFADGKYQGALIELASLREVIDAFFDNVMVMDTDQKVRINRLTLLSQLRDLFLQVADIS 685 >gi|269103825|ref|ZP_06156522.1| glycyl-tRNA synthetase beta chain [Photobacterium damselae subsp. damselae CIP 102761] gi|268163723|gb|EEZ42219.1| glycyl-tRNA synthetase beta chain [Photobacterium damselae subsp. damselae CIP 102761] Length = 689 Score = 780 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 215/720 (29%), Positives = 344/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE + LK + + + + P RL L + L+ + Sbjct: 5 NFLIELGTEELPPKALRTLAEAFAANFEAELKAADLAHNGIEWFAAPRRLALKVNALAEN 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+KI E+ GP + G KA G+ R G+ ++ D KG+ L Sbjct: 65 QPDKIVEKRGPAIASAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLLFKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +L + A+ K+P PK MRW + +IRP+K++ +L +++ Sbjct: 123 KGQEAKALLPELATNALAKLPIPKPMRWGDKET-----QFIRPVKTLTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ++ + + GHRF + + D Y LEE V+ D E R+ I+ DA + Sbjct: 173 VEGTILGVDSARTIRGHRFMGESEFTIDNADQYPAILEERGKVMADYEARKAIIVADAQK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG D +L+EE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAQEVGGIADLDDELVEEVTSLVEWPVVLTASFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI VSN+ + D + I+ GN +VV RL DA F+ D+ Sbjct: 293 AEGNLVPKFIFVSNLISKDP-SQIIAGNEKVVRPRLADAEFFFNTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R+ +L+ +F K+GT ++ RI L IA IDADV RA Sbjct: 340 --------RPLIDRLPQLETA--IFQQKLGTIKDKTDRITELAGFIAAKIDADVDNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLSKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDELPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V++ADKLDTL+ + I + P GS DP+ALRRA LG++RII+E ++ L + + + Sbjct: 450 AAVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKGYNLDLVELVAKAHE 508 Query: 535 I---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D D+I+A+L +K ++ Sbjct: 509 LYGDKLSNDNVESDVIEFMLGRFRAWYQDEGFSVDVIQAVLALHPTKPADFDQRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KR+ ILA K + E+ + L+ +AEK L A I+ ++ Sbjct: 569 FRELDAAESLAAANKRVGNILA---KFDGELPAQWDNALLVEDAEKTLAADIAAMQATLE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q L S+ EP++ FFD V+V DD +++ NRL++L ++N+ L V ++ Sbjct: 626 PAFAAGNYQQALTELASLREPVDAFFDNVMVMADDEKLKVNRLTMLNALRNMFLQVADIS 685 >gi|109896340|ref|YP_659595.1| glycine--tRNA ligase [Pseudoalteromonas atlantica T6c] gi|123361467|sp|Q15ZZ0|SYGB_PSEA6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|109698621|gb|ABG38541.1| glycyl-tRNA synthetase beta chain [Pseudoalteromonas atlantica T6c] Length = 692 Score = 780 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 349/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K A+ + L G L + Y +++ + +P RL + + GL+ Sbjct: 5 NLLVEIGTEELPPKALGKLAQAFADNLQGALDTAELKYTSIKWFASPRRLAVNVIGLAEQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 65 QEDKLIEKKGPAVSVAFDESGQATKAAQGWARSNGITVEQAERLTTD--KGEWLLFKGEA 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L ++ A++K+P PK+MRW + S+ +IRP+ ++ + A+ + Sbjct: 123 KGEQVSSLLPAMIDGALKKLPIPKAMRWGS-----SSIQFIRPVHTVTMLFGAD-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ ++ I + GHRFH + D Y+ LE VL D R++ I + + Sbjct: 173 IEGNILGIDSDRVINGHRFHGEKQFSLSHADDYLAQLEAHYVLADFSARKDKIRHQVNAA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++DLL+E+ LVEW SFD +L +P+E + T+K +QK F + Sbjct: 233 AQKEDAVADMNEDLLDEVTALVEWPVALTASFDDSFLEVPKEALIYTMKDDQKYFPLIDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + F+ V+NI++ D I+ GN +V+ RL DA F+ D+ Sbjct: 293 NGQLKSRFVFVTNIESKDPMQ-IISGNEKVIRPRLADAEFFFNTDKK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L V+F ++GT E+ RI L IA ++ +D++ RA Sbjct: 339 -------TTLESRLESLKT--VLFQKQLGTLYEKSQRISELAGTIANMLSSDISQASRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFP++QG +G YA E+ A+ E PR + +PT+ IS Sbjct: 390 LLSKTDLMTNMVMEFPDVQGVMGMHYAKHDGEHDKVALALNEQYMPRFAGDQLPTSNISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V++ADK+DTL+ + I + P G KDP+ALRRA +G++RI +E K+ + L+ ++ Sbjct: 450 AVAIADKIDTLVGIFGIGQVPKGDKDPFALRRAAIGVLRISVEMKLPLDLTTLVQASINS 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +I F R + + D+ I D+I+A+ I+ ++ Sbjct: 510 FGTKLTHVEDLESQVIDFILGRFRAWYQDQHIDIDVIQAVAARRPTKPADFAARIEAVSA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S A G + KR+ ILA + + I+ E E L +SD + Sbjct: 570 FKSLASGLALASANKRVANILAKNKVTDTN---SINSSLFESEHEAALADAMSDIEETVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + L ++ + ++ FFD V+V +D VR+NRL+LL ++ + L+V ++ Sbjct: 627 AFVVDANYQGVFTELATLHDKVDAFFDNVMVMAEDENVRNNRLALLSKLRTLFLLVADIS 686 >gi|85711017|ref|ZP_01042078.1| glycyl-tRNA synthetase beta subunit [Idiomarina baltica OS145] gi|85695421|gb|EAQ33358.1| glycyl-tRNA synthetase beta subunit [Idiomarina baltica OS145] Length = 688 Score = 780 bits (2014), Expect = 0.0, Method: Composition-based stats. Identities = 214/719 (29%), Positives = 353/719 (49%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + + +E + L + + + ++ TP RL + + L Sbjct: 5 TLLVELGTEELPPKALKQLSESFKHGIEEGLNKAELAFGEIKALATPRRLAVLVNSLEGQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ RS G++ +++ D KG L Sbjct: 65 QQDKVVEKRGPSVDVAFDEAGQPTKAAQGWARSNGIEVSEAERLETD--KGAWLLHKAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + VL IV A++K+P PK MRW + + +IRP+ ++ + +++ Sbjct: 123 KGESLAQVLPGIVEDALKKLPIPKPMRWGDSDA-----QFIRPVHTLTLLF-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ L I G HRFHAP +Q D Y L + V+ D R I + L Sbjct: 173 INASLLGIKSGRHINAHRFHAPDGFDIQHADDYEAQLYKHHVIADQAKRMELIRTSINDL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS +G + D+DL+EE+ LVEW SFD+++L +P+E + +T+K +Q+ F + Sbjct: 233 ASQLGGTVETDEDLVEEVSALVEWPVALSASFDEQFLTVPKEALIVTMKDDQRYFPVQDD 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI ++NI + D I++GN RVV RL DA F++ D+ Sbjct: 293 KGELKPVFIFITNIDSKDP-KQIIKGNERVVRPRLADAQFFFESDKKV------------ 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L R+ +L V+F ++GT ++ RI L +IA ++AD A Sbjct: 340 --------TLSSRLDKLGT--VLFQKQLGTMKDKSERISRLSARIAGSLNADEQHARLAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L K DL T++V EFPE QG +G+ YA+ + DAIE+H PR +N+PT+ +S Sbjct: 390 ELCKTDLVTDMVSEFPETQGVMGRHYALNDGLDAEVADAIEQHYWPRFAGDNLPTSDVSR 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 +V+LADKLD+L+ + I + P G +DP+ALRRA LG+IRII+E+ +++ L + I+ Sbjct: 450 SVALADKLDSLVGIFGIGQTPKGDRDPFALRRAALGLIRIIVESNLNLDLYELIDAAIGE 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +N+ F R + + ++ I D+I+A+L I ++ F Sbjct: 510 FGDRLSNNDVRENVFNFIIGRFRPWYQEQGISVDVIQAVLARAPSRPADFNLRIHAVDAF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 E + KR+ IL+ K +++ +I L+ EK L A IS+ + Sbjct: 570 KQHDAAESLSAANKRVGNILS---KSEGDLTGKIDHTLLVAAEEKTLAAQISETEKSAEP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + S+ PI+ FF+ V+VN +D VR NRL+LL ++ + L V ++ Sbjct: 627 EIAAGNYEGALTRMASLKSPIDDFFENVMVNDEDPAVRQNRLNLLYQLRGMFLRVADIS 685 >gi|262273136|ref|ZP_06050953.1| glycyl-tRNA synthetase beta chain [Grimontia hollisae CIP 101886] gi|262222892|gb|EEY74200.1| glycyl-tRNA synthetase beta chain [Grimontia hollisae CIP 101886] Length = 693 Score = 780 bits (2014), Expect = 0.0, Method: Composition-based stats. Identities = 206/728 (28%), Positives = 344/728 (47%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LKE + ++ ++ Y TP RL L + L Sbjct: 1 MAKNFLIELGTEELPPTQLRTLAEAFAANFEQELKEAELAHEGIKWYATPRRLALKVSAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G++ ++ D KG+ L Sbjct: 61 AEQQADKVVEKRGPAVSAAFDADGNPTKAAQGWARGCGIEVADADRMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ + A+ +P K MRW + +IRP+K++ +L Sbjct: 119 QEVKGQNTKDIVVALADKALANLPIAKPMRWGDKETL-----FIRPVKTLTILL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +++++ + + GHRF + + D Y LEE V+ D E R+ I+ D Sbjct: 169 DELVEGTIMGVGSTRTIRGHRFMGEAEFTIDNADQYPAILEERGKVIADYEARKATIIAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A +G + DL+EE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 AQKAAKQLGGVADLEDDLVEEVTSLVEWPVVLTATFEEKFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSEDKQLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFFFDTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ +L+ +F ++GT ++ RI L IA I ADV Sbjct: 339 -----------RPLIDRLPQLETA--IFQKQLGTIKDKTDRITELAGYIADKIGADVEKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF E QG +G YA E A+ E PR + +P + Sbjct: 386 KRAGLLAKCDLMTSMVFEFTETQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPGD 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S +++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E D+ L+ + Sbjct: 446 GVSSALAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYDLDLTDLVAK 504 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + ++I F R + + D D I+A+L Sbjct: 505 AKSLFANEDGSNRLTNENVEADVIEFMLGRFRAWYQDEGHSVDAIQAVLAMRPTQPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K + F S E + KR+ ILA K + E+S I+ + L+ +AEK L + Sbjct: 565 KRVKAVTHFRSLDAAESLAAANKRVGNILA---KFDGELSDTINSELLVEDAEKALADKV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + Y L + EP++ FFD V+V +D ++ NRL+LL +++ Sbjct: 622 TAMVEALAPVFAAGDYQTALTQLAELREPVDTFFDNVMVMAEDEALKANRLALLNTLRSQ 681 Query: 692 ILIVINVQ 699 + V ++ Sbjct: 682 FMNVADIS 689 >gi|89092284|ref|ZP_01165238.1| glycyl-tRNA synthetase beta subunit [Oceanospirillum sp. MED92] gi|89083372|gb|EAR62590.1| glycyl-tRNA synthetase beta subunit [Oceanospirillum sp. MED92] Length = 682 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 350/715 (48%), Gaps = 56/715 (7%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + ++ + + LKE GV + +++ Y +P RL + + L Sbjct: 4 HDFLVELGTEELPPKALKTLSDAFTSGITAGLKEAGVNFGDVKSYASPRRLAVLISALDD 63 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 ++ E+ GP V A +KA++GF RS G+ +I D KG+ Y + + Sbjct: 64 KQADREIEKRGPSVKAPEKAVEGFARSCGVTIDQLEKI--DTNKGEYYNFKNTEEGKATS 121 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 +L +V ++ K+P PK MRW S ++RP+ ++ + ++++D ++ Sbjct: 122 SLLPELVETSLNKLPIPKRMRWGA-----SRVEFVRPVHWLVMLF-----GDEVVDCEIL 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVG 240 + G T GHRFH I++ + Y LE MV+ D + R+ I + Sbjct: 172 GLTSGRKTRGHRFHYNQEIELIAPSEYADRLENPGMVIADYDIRKAMINEQVKAEGDKLN 231 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 D+DLL+E+ L EW G F++++L +P + + ++K +QK F G L Sbjct: 232 AVAQIDEDLLDEVTALNEWPVALTGRFEERFLEVPAQALISSMKEHQKYFHHLDANGNLL 291 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F + NI + D +++GN +V+ RL DA F++ D+ Sbjct: 292 PNFTTICNIVSKDP-QQVIEGNEKVIRPRLSDAAFFFETDKK------------------ 332 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ R+ +L +VF +GT ++ +RI L KIA ++ D A +RA +L K Sbjct: 333 --TTLESRVEKLKT--IVFQKDLGTVYDKAARISALSGKIAATLNQDQAKAERAGLLCKT 388 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T++V EF +LQG +G YA+ E+ A E PR + +P + V++A Sbjct: 389 DLLTDMVYEFTDLQGLMGYHYALNDGEDQDVALAQNEQYMPRFAGDELPQTAPGVAVAIA 448 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----------------ENKIDIP 524 D+LDTL + IN+ P+GSKDP+ALRRA LG++RII+ N D+P Sbjct: 449 DRLDTLTGLFGINQPPTGSKDPFALRRAALGVLRIIVERELDLDLRELLTIAANNHNDLP 508 Query: 525 LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + +ED+ ++ F +R + + D DI ++ ++L + L +K +N F S A Sbjct: 509 AREGLEDK-VLDFMLERFRAWYEDADINAEVFLSVLALKPSRPLDFDRRVKAVNHFRSLA 567 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + E + KR+ IL+ K+ + +++ + L AEK L A I + Sbjct: 568 EAEALAAANKRVSNILS---KQGVTGTTDVNNELLTEAAEKALAADIEAQKAALAPLFAE 624 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + + L + + FF+ V+V +D V++NRL+LL ++ + L V ++ Sbjct: 625 GKYQEALESLAGLRASTDAFFEDVMVMAEDEAVKNNRLALLSQLRALFLGVADIS 679 >gi|226327616|ref|ZP_03803134.1| hypothetical protein PROPEN_01487 [Proteus penneri ATCC 35198] gi|225204142|gb|EEG86496.1| hypothetical protein PROPEN_01487 [Proteus penneri ATCC 35198] Length = 690 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 193/720 (26%), Positives = 337/720 (46%), Gaps = 60/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + ++ + P RL + + ++ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDNANITHGDVSWFAAPRRLAIKVANMAKS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ Sbjct: 65 QADRTIEKRGPAIAQAFDAEGKPTKAAEGWARGNGITVDQAERLSTD--KGEWLFYRAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGEAVNQLLIGMVSTALSKLPIPKLMRWGDKET-----HFVRPVHTVTLLL-----GDTV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ID ++ I + GHRF + + D Y L E V+ D E R++ IL+DA Sbjct: 173 IDGEILGIQSDRVIRGHRFMGEAEFTIDNADQYPEILYERGKVIADYETRKSIILHDARL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAEKLGGIADLSDSLVEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KQGGLLPNFIFVTNIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F +GT ++ RI+ L IA + DV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQKDLGTLRDKTDRIQALAGFIAGKMGTDVNKATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A++E +PR + +P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVAVALKEQYQPRFAGDELPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++A+K+DTL + I + P G KDP+ALRRA+LG++RII+E + + + + ++ Sbjct: 450 SALAIAEKMDTLAGIFGIGQHPKGDKDPFALRRASLGVLRIIVEQDLPLDIEELTQEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + + D I+A+L +K + Sbjct: 510 LYGEKLTNKNVVSDVVEFMLGRFRSWYQELGYSIDTIQAVLARRPTQPADFNARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA + N +++ + L E +L A +S + Sbjct: 570 FRTLEEAAALAEANKRVSNILA--KSANVKLNDTVLASVLKAPEEVQLAANLSVLQDKLA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++Y + L S+ + + FFD+V+V +D VR NRL++L ++ + L V ++ Sbjct: 628 PLFAERKYQEALVELASLRDVVNNFFDKVMVMDEDEAVRINRLTMLSQLRELFLKVADIS 687 >gi|15602967|ref|NP_246039.1| glycyl-tRNA synthetase subunit beta [Pasteurella multocida subsp. multocida str. Pm70] gi|13431896|sp|P57905|SYGB_PASMU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|12721444|gb|AAK03186.1| GlyS [Pasteurella multocida subsp. multocida str. Pm70] Length = 689 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 349/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI +EE+P + K A + + L + G+ +++++ + P RL + + L+ Sbjct: 5 NFLAEIGTEELPPKALKKLATAFAENMELELNQAGLAFESVQWFAAPRRLAVKVLALATS 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ ++ D KG+ + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGISVEQAERVATD--KGEWLVHRATI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++LK +V A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLKDMVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++ D Y L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVESARTLRGHRFLGEREFQISHADQYPALLKEKGSVVADFNDRKALILAKSQE 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G + DLL+E+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEDDLLDEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D + I++GN +VV RL DA F+K D Sbjct: 293 KDGKLLPHFIFVSNINPDDP-SKIIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L+ ++ RL+ V+F ++GT ++ +RI L +IA+ I AD RA Sbjct: 338 ------LKQRLEDQLPRLET--VLFQQQLGTLRDKTARIEQLAGEIAKQIGADEVKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I ++P GS DP+ALRRA LG +RII+E + + L++ ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQQPKGSADPFALRRAALGALRIIVEKNLPLDLAEIVKKSSA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNANVVEDVVEFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPSDFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K E+ I AEK L + + Sbjct: 570 FRALEAAEALAAANKRVSNILA---KVEGELPANIDTTLCAEAAEKVLAEQVIALQAELA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y D L ++ EP++ FFD V+VN ++ ++R NRL++L ++N+ L V ++ Sbjct: 627 PLFAKGEYQVALDRLAALREPVDTFFDNVMVNAENPQLRQNRLAILNNLRNLFLQVADIS 686 >gi|254293492|ref|YP_003059515.1| glycyl-tRNA synthetase subunit beta [Hirschia baltica ATCC 49814] gi|254042023|gb|ACT58818.1| glycyl-tRNA synthetase, beta subunit [Hirschia baltica ATCC 49814] Length = 722 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 274/752 (36%), Positives = 407/752 (54%), Gaps = 83/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++ EEIPARMQ KA DL ++ L E G++ + ++ + P RL + +GL Sbjct: 1 MPQLLLELFCEEIPARMQAKAQADLERAVMDKLSEAGLMAEGVKAFSGPRRLCVVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GP+VGA +KAI GFLR GL +I +I++D KKG Y+AV+ KP Sbjct: 61 VKSADVREERKGPKVGAPEKAIAGFLRGAGLDSIEQAEIQEDKKKGQFYVAVINKPGVET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ +VP ++ WPKSMRW + W+RPL+ ILC E ++ ++ Sbjct: 121 TQIIANMVPEIVRSFHWPKSMRWGSRE-----MRWVRPLQRILCTFDGE-----VVPFEI 170 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAV 239 I N+T GHR P KV+ D Y L+ + V+ D + R++ I +A L A Sbjct: 171 DGIASSNVTQGHRVMGAGPFKVRRFDDYSDILKNKGRVIYDRDERKDIIATEAKTLCDAQ 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGV 298 GLELV D LLEE+ GL E+ V MG D K+L LP E+I L+++ +QK F R + G Sbjct: 231 GLELVPDIGLLEEVAGLAEFPVVIMGDMDPKFLALPPEVITLSMRVHQKYFAVRDPKTGK 290 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI+V+N++A DGG I GNS+V++ARL DA+ F++ D+ Sbjct: 291 LAPKFIVVANLEAEDGGKTIAAGNSKVLSARLSDAVFFYENDK----------------- 333 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 +K L++R L ++VFH K+GT ++ R+ L ++A ++ A A L+ Sbjct: 334 ---AKKLEERFDSLG--NIVFHEKLGTVKDKAERVAALAGELAPIVGAKKEDAIAAAKLA 388 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL E+V EF EL+G +G+ YA+ + + D I +H KP+GP ++VPT ++ V+ Sbjct: 389 KCDLVAEMVFEFTELEGVMGRYYAMEEGQPQHIADTIRDHYKPKGPSDDVPTEPTAVAVA 448 Query: 479 LADKLDTLI-NFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------ 531 LADKLDTL FW INE P+GSKDPYALRR+ LG+IR++LEN I + L + Sbjct: 449 LADKLDTLCSGFWTINELPTGSKDPYALRRSALGVIRLVLENNIRLKLEPCFSELAEIGF 508 Query: 532 -----------------------------------------QNLILFFHDRLKLYLHDRD 550 QNL+ FF DRLK+YL D+ Sbjct: 509 ALSPVSKAHWTEMWKLSQDVEADGTTFIEGTGFKDEAQTLAQNLLSFFEDRLKVYLRDKG 568 Query: 551 IRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE- 609 IRHDL++A+ D+L+ IV ++ L F + G+ + KR IL EEKK+ Sbjct: 569 IRHDLLDAVFSLGGDDLVLIVKRVEALGSFLETEDGKNLVSGHKRATNILQKEEKKDGSA 628 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I+ EI + L AE L+ ++ + + ++ + + L + P++ FFD V+ Sbjct: 629 ITGEIDKKLLSDAAELALHEALNVATANAEAALKKEDFEGAMSALSLLRGPVDTFFDDVI 688 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN +D +VR+NRL LL I+++ V + KI Sbjct: 689 VNAEDNKVRENRLKLLARIRDVTSQVADFSKI 720 >gi|88801020|ref|ZP_01116569.1| Glycyl-tRNA synthetase, beta subunit [Reinekea sp. MED297] gi|88776223|gb|EAR07449.1| Glycyl-tRNA synthetase, beta subunit [Reinekea sp. MED297] Length = 681 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 204/714 (28%), Positives = 358/714 (50%), Gaps = 54/714 (7%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + +I L++ G+ +++ ++ P RL L LK L Sbjct: 4 ADFLIELGTEELPPKALRMLKNAFAEGIIERLQKAGLSFEDSERFAAPRRLALTLKNLEL 63 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 P++ +ER GP A +AI+GF +S G+ + +++ D KG + KP + Sbjct: 64 KQPDEEQERKGPNAKAPAQAIEGFAKSCGVTVVDLEELETD--KGTWLVYRGVKPGKPTA 121 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 ++L IV + +P PK MRW ++RP+K +L +L ++++ ++ Sbjct: 122 ELLPEIVQQTLDALPIPKRMRWGARRD-----EFVRPVKWLLMLL-----GDEVVPAEIY 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVG 240 + GN++ GHRFHAP I + S Y L E V+ R I + ++A+ G Sbjct: 172 GVSSGNLSRGHRFHAPKDIAITSASAYQETLRAEGKVMASYGERHKLIEAEVKKVAAEKG 231 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + V D DLL+E+ L EW +G F++++L +P E + +++ +QK F T EG + Sbjct: 232 VVPVIDADLLDEVTALNEWPVALVGQFEERFLEVPAEALMSSMEEHQKYFPTVDAEGNIQ 291 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI ++NI++ D +++GN +V+ RL DA FW+ D+ Sbjct: 292 PYFIFIANIESKDP-QVVIEGNEKVIRPRLSDAAFFWETDKK------------------ 332 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L R+A L V F ++G+ ++V RI+ + IA IDA V+ +RA L+KA Sbjct: 333 --TKLADRVASLKT--VKFQEQLGSVFDKVERIQKIAGHIAGQIDASVSEAERAAYLAKA 388 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T++V EF +LQG G+ YA+ E + +AI E KP G + +P ++ + V+LA Sbjct: 389 DLVTDMVFEFTDLQGIAGRYYALADGEPEAVAEAILEQYKPAGAGDALPESREGMAVALA 448 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 D+LD L + I + P+G+KDP+ALRRA LG++RI++E ++D+ L+ + Sbjct: 449 DRLDNLSGLFGIGQPPTGTKDPFALRRAALGVLRIVVERELDLDLADLVAFAADQHNKLP 508 Query: 533 -------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +++ + DR + D IR ++ +A+ I ++ + EF + Sbjct: 509 KRDAVVNDVVHYALDRFSAWYADEGIRTEVFQAVRALNLTKPYDIDLRVRAVAEFSKLDQ 568 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + KR+ L+ K +I EI E L + + ++ Sbjct: 569 AEALAAANKRVSNFLS---KVEGDIPTEIDVARFEESVEGDLLKALDGVEAKVSAAVQSS 625 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L ++ + ++ FFD+V+V DD VR+NRL+LL ++ + + V ++ Sbjct: 626 DYRTALNELSTLRDAVDAFFDKVMVMADDDNVRNNRLALLSKLRGLFVQVADIS 679 >gi|77358988|ref|YP_338563.1| glycyl-tRNA synthetase subunit beta [Pseudoalteromonas haloplanktis TAC125] gi|123730516|sp|Q3IJ28|SYGB_PSEHT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|76873899|emb|CAI85120.1| glycyl-tRNA synthetase, beta subunit [Pseudoalteromonas haloplanktis TAC125] Length = 689 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 210/723 (29%), Positives = 343/723 (47%), Gaps = 62/723 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L + Sbjct: 1 MSAQNLLVEIGTEELPPKALRKLAEAFAANLTAELETLELAHQGVSWYASPRRLGLRVIA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L +K E+ GP + G KA G+ R G++ ++ D KG L Sbjct: 61 LDAKQQDKEVEKRGPAIKAAFDADGNPTKAAMGWARGCGIEVKDAQTLETD--KGAWLLH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + + ++ ++ A+ K+P PK MRW + +IRP+ ++ +L Sbjct: 119 LAKVAGQETKTLMVDVINKALAKLPIPKPMRWGANKT-----QFIRPVHTVTILL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 169 GDELVTGEVLGKQVSNQLQGHRFHHPEKITINHADDIFDVLKSAYVIADYEQRKAQIRAQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A A+ + D+DLLEE+ LVEW +F++++L +P E + T+K +QK F Sbjct: 229 IEAAAKAINAVVAMDEDLLEEVTSLVEWPVTLTATFEEEFLAVPAEALIYTMKDDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L N F+ VSNI++ D + ++ GN +VV RL DA F++ D+ Sbjct: 289 LLDQNGKLLNKFLFVSNIESKDP-SVVISGNEKVVRPRLADAQFFFESDKK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 K L+ R+ LD V+F ++GT ++ +RI L IAQ + AD L Sbjct: 339 -----------KTLESRLESLD--SVLFQKQLGTLKDKSARISELAGYIAQQLGADKELA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EF ++QG +G YA E A E PR +++PTN Sbjct: 386 QRAGLLSKTDLMTEMVMEFTDIQGVMGMHYARFDGEAEDVALAQNEQYMPRFAGDSLPTN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + + + Sbjct: 446 LISCAVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKELPLDILDLVAK 505 Query: 532 QNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + F R + + D I D+I+A+L + +K Sbjct: 506 SQTLFGDKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + E + KR+ ILA K + + L +AEK L A ++ F T Sbjct: 566 VSHFRTLDAAEALAAANKRVSNILA---KNDITSEGNVDESLLTDDAEKVLAAQVAKFAT 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + Y + L I + ++ FFD V+V DD V+ NRL+LL + + L + Sbjct: 623 ELAPLYASGNYQEALSQLAGIRQSVDSFFDNVMVMADDEAVKQNRLALLSQLSGLFLGIA 682 Query: 697 NVQ 699 ++ Sbjct: 683 DIS 685 >gi|146339077|ref|YP_001204125.1| glycyl-tRNA synthetase subunit beta [Bradyrhizobium sp. ORS278] gi|146191883|emb|CAL75888.1| glycine tRNA synthetase, beta subunit [Bradyrhizobium sp. ORS278] Length = 772 Score = 778 bits (2011), Expect = 0.0, Method: Composition-based stats. Identities = 312/792 (39%), Positives = 428/792 (54%), Gaps = 113/792 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG AI GFL++TGL ++ + I++DPKKGD Y+A++ KP R Sbjct: 61 ARQADLKEERKGPRVGGPDAAIQGFLKATGLASLEEATIQRDPKKGDFYVALIEKPGRAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL ++PV ++ PWPKSMRW A SW+RPL +I E + +I + Sbjct: 121 LDVLAEMLPVIVRTFPWPKSMRWGQRSEKPGALSWVRPLHAITATFGLETEEPDVISFAV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP V+ + Y L +A V+LDP+ R++ I+ DA +LA A G Sbjct: 181 DGIEAGQTTYGHRFLAPSAFTVRRFEDYEAKLLDAKVVLDPQRRKDTIVTDAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED LL+E+ GLVEW V MGSFD +YL +P E+IR TI+ NQKCFV R + G L Sbjct: 241 YELVEDPVLLDEVAGLVEWPVVLMGSFDPEYLKVPGEVIRATIRNNQKCFVVRDPKTGGL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FIL +NI+A+DGG I+ GN RV+ ARL DA F++ D Sbjct: 301 APKFILTANIEATDGGKTIIAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + + +VFH K+GTQ R++RI L +IA ++ AD A RA L+K Sbjct: 342 -LKTKLEDRLPKFE--QIVFHEKLGTQAARIARIEKLAAEIAPMVGADAAKTARAAKLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPE+QG +GK YA+ Q E+ S A EEH KP+GP + VP + +S+ V+L Sbjct: 399 ADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAAACEEHYKPQGPGDRVPADPVSVAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------- 532 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRIILEN + + L+ Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIILENDLRVHLADICGPAFFDLATA 518 Query: 533 -------------------------------------------NLILFFHDRLKLYLHDR 549 +LI FF DRLK+ L ++ Sbjct: 519 IRAREVGNEVEQAESGEKPGLTRFVVRVDAQTFGTRSVPVKVVDLISFFADRLKVQLREQ 578 Query: 550 DIRHDLIEAILRPEN---------------------------------------DNLLTI 570 RHDL++A+ D+LL + Sbjct: 579 GARHDLVDAVFATSPSPWWRSDAARSGAGRLDLIEAAGSEEALDREPSQEEEMKDDLLMV 638 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYA 629 V ++ L +F S G+ L KR ILAIEEKK+ R+ L+ EK L Sbjct: 639 VRRVEALGKFLDSDDGKNLLAGTKRASNILAIEEKKDKRKFDGAPDAALYKLDEEKALAR 698 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I + G ++ + + + + ++ FFD+V VN DD +R+NRL LL I+ Sbjct: 699 AIGEVGAEAGAAVAKEDFAAAMRAMAKLRPAVDAFFDKVKVNDDDAAIRENRLKLLNEIR 758 Query: 690 NIILIVINVQKI 701 + V + KI Sbjct: 759 SATRAVADFSKI 770 >gi|85057990|ref|YP_453692.1| glycyl-tRNA synthetase subunit beta [Sodalis glossinidius str. 'morsitans'] gi|123739018|sp|Q2NX38|SYGB_SODGM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|84778510|dbj|BAE73287.1| glycyl-tRNA synthase beta subunit [Sodalis glossinidius str. 'morsitans'] Length = 689 Score = 778 bits (2011), Expect = 0.0, Method: Composition-based stats. Identities = 209/721 (28%), Positives = 337/721 (46%), Gaps = 61/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P + AE +I + G L V + + + P RL + + L Sbjct: 4 HTFLVEIGTEELPPKALRALAEAFAIHISGELDAANVRHGEVSWFAAPRRLAVKVAALGG 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP + G KA +G+ R G+ ++ D KG+ + R Sbjct: 64 AQADSDVEKRGPAIAQVFDADGNPTKAAEGWARGCGITVSQAERLATD--KGEWLVYRAR 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++++L +V A+ K+P PK MRW + +IRP+ ++ +L + Sbjct: 122 VKGQPVQELLCAVVSRALGKLPIPKMMRWGDNET-----QFIRPVHTVTLLL-----DDG 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 +I ++ I I GHRF I ++ D Y + L + V+ D R+ I DA Sbjct: 172 VIAGNVLGIDADRIVRGHRFMGEREISLEHADQYPQVLLDRGRVMADYLQRKETIRRDAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 232 EAAKRLGGVADLSESLLEEVTSLVEWPVVLTARFEEKFLAVPAEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V+NI++ D I+ GN +VV RL DA F+ D Sbjct: 292 DAAGNLLPHFIFVANIESKDP-QQIIAGNEKVVRPRLADAEFFFNTDHK----------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 + L+ R+ RLD V+F ++GT ++ RI L IA I ADV R Sbjct: 340 ---------QRLEDRLPRLDT--VLFQKQLGTLRDKSDRIEALSAWIAGRIGADVPQAAR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E + A +E +PR + +PT + Sbjct: 389 AGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEPEAVALAQKEQYQPRFAGDALPTTLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S V++ADK+DTL + I + P G KDP+ALRRATLG++RII+E ++ + L E+ Sbjct: 449 SCAVAIADKMDTLAGIFGIGQHPKGDKDPFALRRATLGVLRIIVEKQLPLDLQTLTEEAV 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++I F R + + ++ D I+A+L ++ ++ Sbjct: 509 RLYGEKLTNDAVVNDVIDFMLGRFRAWYQEQGHSVDTIQAVLARRPTRPADFDARVRAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + + KR+ ILA K + + ++ L +E L + + Sbjct: 569 YFRTLEEAASLAAANKRVSNILA---KSDDPVYKDLQASVLKDPSEITLATHLVVLREKL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q + RY L ++ EP++ FFD V+V DD +VR NRL+LL ++ + L V ++ Sbjct: 626 QPLFEAGRYQDALVELAALREPVDAFFDSVMVMADDPQVRINRLTLLAQLRKLFLQVADI 685 Query: 699 Q 699 Sbjct: 686 S 686 >gi|170740976|ref|YP_001769631.1| glycyl-tRNA synthetase subunit beta [Methylobacterium sp. 4-46] gi|238688003|sp|B0UNU2|SYGB_METS4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|168195250|gb|ACA17197.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium sp. 4-46] Length = 704 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 310/724 (42%), Positives = 422/724 (58%), Gaps = 45/724 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLRKLVTDALVERGFLYEGAKAFSTPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVGA + A+ GFL+S GL ++ ++ DPKKG+ Y+AV+ +P R Sbjct: 61 VRGQDVREERKGPRVGAPEAAVQGFLKSAGLASLDQARVVADPKKGEFYVAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + A W+RPL +I+ E + + + Sbjct: 121 LDVLAEILPAIIRAFPWPKSMRWGAASAEPGALRWVRPLHAIVATFGPETETPERVPFRV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF +P PI+V+ Y+ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGIEAGFTTYGHRFLSPGPIEVRRFADYLPALERAKVVLDADRRKDIILHDARDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG--- 297 L+LVED+ LLEE+ GLVEW MG+FD +L +P E+IR TI+ NQKCFV R Sbjct: 241 LDLVEDEGLLEEVAGLVEWPVTLMGAFDASFLDIPPEVIRATIRANQKCFVLRAPAADPA 300 Query: 298 -----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 LAN FILVSN+ ASDGGAAIV GN RVV ARL DA FW+ D+ Sbjct: 301 AKGRERLANAFILVSNLAASDGGAAIVAGNERVVRARLSDAKFFWETDRKI--------- 351 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 PL +R+ +LD D+VFH K+GTQ RV RI L + A ++ AD A + Sbjct: 352 -----------PLAERLPKLD--DIVFHEKLGTQAARVGRIAALARAFAPVVGADPAEAE 398 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+KADL TE+V EFPELQG +G+ YA LQ E + AIEEH KP GP + VPT Sbjct: 399 RAARLAKADLVTEMVGEFPELQGLMGRYYAELQGEPEAVAAAIEEHYKPLGPGDRVPTGP 458 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK------------ 520 +S+ V+LADKLDTL+ FW+++EKP+GSKDPYALRRA LG+IR++L Sbjct: 459 VSVAVALADKLDTLVGFWSVDEKPTGSKDPYALRRAALGVIRLVLGAGARLPLLPALAAA 518 Query: 521 -IDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLN 578 + +L+ FF DRLK++L D+ RHDLI+A+ P D+LL +V ++ L Sbjct: 519 AGGHGAAPGGFAADLLGFFADRLKVHLRDQGARHDLIDAVFALPGQDDLLLVVRRVEALG 578 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTH 637 + G L +R IL IEEKK+ P L E L ++ Sbjct: 579 RLLDTEDGTNLLAGYRRAANILRIEEKKDGRAHDGAPDPARFALPEETALAEALAAARGA 638 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + ++ + + L + P++ FFD+V VN +D +R+NRL+LL ++ L V + Sbjct: 639 AERAVAAEDFEGAMRALAGLRAPVDAFFDKVTVNAEDPAMRENRLALLGALRTATLAVAD 698 Query: 698 VQKI 701 +I Sbjct: 699 FSRI 702 >gi|292490092|ref|YP_003532987.1| glycyl-tRNA synthetase subunit beta [Erwinia amylovora CFBP1430] gi|292901099|ref|YP_003540468.1| glycine-tRNA synthetase subunit beta [Erwinia amylovora ATCC 49946] gi|291200947|emb|CBJ48086.1| glycine-tRNA synthetase, beta subunit [Erwinia amylovora ATCC 49946] gi|291555534|emb|CBA24085.1| Glycyl-tRNA synthetase, beta subunit [Erwinia amylovora CFBP1430] gi|312174286|emb|CBX82539.1| Glycyl-tRNA synthetase, beta subunit [Erwinia amylovora ATCC BAA-2158] Length = 689 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 202/724 (27%), Positives = 336/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAESFAANLTAELDAAGLAHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LSAAQPDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 R + +L ++ ++ K+P PK MRW S ++RP+ ++ +L Sbjct: 119 RARVTGERTQALLPAMIANSLTKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I ++ + + GHRF + D Y + LE V D R+ I Sbjct: 169 GDELIPANILGVDSARVIRGHRFMGEPAFTIDHADQYPQILLERGKVQADYAARKATIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLNDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDKAGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFNSDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ + RL+ V+F ++GT + RI+ L +A I ADV Sbjct: 340 ------------RRLEDNLPRLET--VLFQKELGTLRAKTDRIQALSGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDVLPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLSE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGNKLSNAKAVDEVIDFMLGRFRAWYQEEGHSVDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY + L + E ++ FFD+V+VN +++EVR NRL+LL ++ + L V Sbjct: 623 SKLQPFFAEGRYQEALIELAQLREAVDNFFDKVMVNAEEKEVRINRLTLLAKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|253987711|ref|YP_003039067.1| glycyl-tRNA synthetase subunit beta [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779161|emb|CAQ82321.1| glycyl-trna synthetase beta chain (glycine--trna ligase beta chain (glyrs) [Photorhabdus asymbiotica] Length = 689 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 201/720 (27%), Positives = 332/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + + TP RL L + L Sbjct: 5 TFLVEIGTEELPPKALRSLAEAFAANFAAELDNANLAHGEVSWFATPRRLALKVANLDEA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPTKAAEGWARGCGITAAQAERLVTD--KGEWLLYRALV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++L +V A+ K+P PK MRWS + ++RP+ ++ + ++ Sbjct: 123 KGLSVKELLAGMVNNALSKLPIPKLMRWSDKET-----QFVRPVHTVTMLF-----GNEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ D+ I + GHRF + + + Y L++ V+ D R+ I D + Sbjct: 173 IEGDILGIKSTRVIRGHRFMGESEFTIDNTEQYPEILQQRGKVMADYVTRKALIKQDVEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAVKLGGIADISDSLLEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 HAGKLMANFIFVANIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALAGWIAEKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ IS Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYQPRFAGDELPSTGIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E K+ + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGALRIIVEKKLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + ++ D I+A+L +K + Sbjct: 510 LYGDKLTNAKVIDDVVEFMLGRFRAWYQEQGYSIDTIQAVLARRPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ ++S L E +L + + Sbjct: 570 FRTLDEATALAAANKRVSNILA---KSEETLNEKVSASVLKAPEEVKLATHLVVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ E ++ FFD V+V +D++VR NRL+LL ++ + L V ++ Sbjct: 627 PLFAEGCYQEALVELASLREVVDAFFDNVMVMDEDQQVRVNRLTLLSELRELFLKVADIS 686 >gi|238783054|ref|ZP_04627081.1| Glycyl-tRNA synthetase beta subunit [Yersinia bercovieri ATCC 43970] gi|238716055|gb|EEQ08040.1| Glycyl-tRNA synthetase beta subunit [Yersinia bercovieri ATCC 43970] Length = 689 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 325/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + + Y P RL L + LS Sbjct: 5 TFLVEIGTEELPPKALRSLAESFAANFTAELDSANLPHGEVIWYAAPRRLALKVVNLSAA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E + Sbjct: 123 KGESAQLLLAGMVNAALAKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYI-RDLEEAMVLLDPECRRNAILNDAHR 234 I + I I GHRF + + + Y LE V+ D E R+ I DA Sbjct: 173 IAGTVLGIDSDRIIRGHRFMGEAEFALDNAEQYPQALLERGKVIADYELRKAIIKRDAEL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAQKIGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 293 TAGNLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA Sbjct: 340 --------KRLEDNLPRLET--VLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR +++P+N I+ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPIA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D I+A+L +K + Sbjct: 510 LYGSKLTNAKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ ILA K ++ + L AE +L + ++ Sbjct: 570 FRTLDAAAALAAANKRVSNILA---KSTDTLNDHVRASVLKDPAELKLATHLVVLRDKLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E I+ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 627 PIFAAGQYKEALVELAALRETIDEFFDSVMVMAEDDAVRINRLTLLSKLRELFLQVADIS 686 >gi|83642934|ref|YP_431369.1| glycyl-tRNA synthetase subunit beta [Hahella chejuensis KCTC 2396] gi|123767557|sp|Q2SQY0|SYGB_HAHCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|83630977|gb|ABC26944.1| Glycyl-tRNA synthetase, beta subunit [Hahella chejuensis KCTC 2396] Length = 692 Score = 777 bits (2007), Expect = 0.0, Method: Composition-based stats. Identities = 212/719 (29%), Positives = 356/719 (49%), Gaps = 59/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+EI +EE+P + + AE + + L++ + + + Y P RL +++ GL+ Sbjct: 5 DFLVEIGAEELPPKALRQLAEAFAQGIRQRLEKAQLSFSELTWYAAPRRLAVHVSGLAEK 64 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ E+ GP GA KA +GF RS G +++ D KG + ++ Sbjct: 65 QPDLEVEKRGPALQAAFDAAGAPTKACEGFARSCGTTPDKLEKLETD--KGVWLVFRSKQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L IV ++ +P PK MRW + ++RP+ I+ + EK+ Sbjct: 123 AGAPTTGLLPAIVEESLAALPIPKRMRWGARRT-----EFVRPVHWIIMLF-----GEKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 ID ++ + GN T GHRFH P PI++ + +Y L+ V+ D E R+ I Sbjct: 173 IDCEILGLKAGNTTLGHRFHHPAPIEIATPANYKDALKNTGYVMADFEERKALIRQQVEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A V D++LLEE+ L EW MG F+ ++L +P E + T+K NQK F Sbjct: 233 IAKQTSGMAVIDEELLEEVASLNEWPTALMGRFEDRFLEVPAEALISTMKGNQKYFHVVD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG + FI V+NI++ D ++ GN RV+ RL DA F+ D+ Sbjct: 293 AEGRMLPYFITVANIESKDP-QQVIDGNERVIRPRLSDAAFFFSTDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L R+ L +VF ++GT ++ R+ L KIA ID++ RA Sbjct: 340 --------RTLASRLEDLKP--IVFQQQLGTVYDKAIRVGKLAAKIAAKIDSNPEWAQRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL TE+V EFPELQG +G+ YA + +E A EE PR + +PT Sbjct: 390 GELSKTDLATEMVMEFPELQGTMGRYYAAIDSEPEEVSMAQEEQYLPRFAGDQLPTTLTG 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 VSLADKLDT++ + IN+ P+G+KDP+ LRRA LG++RI++E K+D+ L++ ++ Sbjct: 450 CAVSLADKLDTIVGIFGINQPPTGAKDPFGLRRAALGVLRILVEKKLDLDLAECVQWAQE 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + ++ + DR + + + + ++ ++L + + + EF Sbjct: 510 LHGDLPAENLETAVVDYMLDRFRAWYEEAGVPTEVFLSVLARRPTKPVEFDQRVLAVAEF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ IL+ E+ S +P+ EAEK L+ + + + Sbjct: 570 LKLDAAQALAAANKRVSNILSKEQVDISAESA--NPELFTEEAEKNLFRALQEKSESARP 627 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + Q L + + I++FFD+V+V VDD +R NR++LL ++++ L V ++ Sbjct: 628 YIEQRNFTQALQQLAELKDVIDLFFDKVMVMVDDPAIRSNRMTLLASLRHVFLQVADIS 686 >gi|227355124|ref|ZP_03839535.1| glycyl-tRNA synthetase beta subunit [Proteus mirabilis ATCC 29906] gi|227164911|gb|EEI49758.1| glycyl-tRNA synthetase beta subunit [Proteus mirabilis ATCC 29906] Length = 690 Score = 777 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 195/720 (27%), Positives = 339/720 (47%), Gaps = 60/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + ++ + P RL + + ++ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFATHFTAELDNANITHGDVSWFAAPRRLAIKVANMAKS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++I E+ GP + G KA +G+ R G+ ++ D KG+ Sbjct: 65 QADRIVEKRGPAIAQAFDAEGKPTKAAEGWARGNGITVDQAERLSTD--KGEWLFYRAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGEAVNQLLAGMVSNALAKLPIPKLMRWGDKET-----HFVRPVHTVTLLL-----GDTL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ID ++ + I GHRF + + D Y L E V+ D E R++ IL+DA Sbjct: 173 IDGEILGVQSDRIIRGHRFMGEAEFTIDNADQYPEILYERGKVIADYENRKSIILHDARL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAEKLGGVADLSDSLVEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KQGALLPHFIFVSNIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F +G+ ++ RI+ L IA+ + ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQKDLGSLRDKTDRIQALAGFIAEKMGADVNKATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A++E +PR + +P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALKEQYQPRFAGDALPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V++A+K+DTL + I + P G KDP+ALRRA LG++RII+E + + + + ++ Sbjct: 450 SAVAIAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEQDLPLDIEELTQEAAR 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNKNVVSDVVEFMLGRFRAWYQELGYSIDTIQAVLARRPTQPADFNARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA + + +++ ++ L E +L A +S + Sbjct: 570 FRTLEEAAALAEANKRVSNILA--KSADVKLNDKVLASVLKAPEEVQLAANLSVLQDKLA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++Y + L S+ + + FFD+V+V D E+R NRL++L ++ + L V ++ Sbjct: 628 PLFAERKYQEALVELASLRDVVNNFFDKVMVMDKDEEIRVNRLTMLHELRELFLKVADIS 687 >gi|308047728|ref|YP_003911294.1| glycyl-tRNA synthetase beta chain [Ferrimonas balearica DSM 9799] gi|307629918|gb|ADN74220.1| glycyl-tRNA synthetase beta chain [Ferrimonas balearica DSM 9799] Length = 697 Score = 777 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 204/727 (28%), Positives = 344/727 (47%), Gaps = 68/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + ++ L + Y ++ + +P RL + + L+ Sbjct: 5 TFLVEIGTEELPPKALRTLAESFAANMVDSLNAAELPYGDLTWFASPRRLAIKVSALAAQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ RS G+ +I D KG+ L Sbjct: 65 QADKIVEKRGPAVQAAFDADGNPTKAAEGWARSNGITVAEAGRIATD--KGEWLLHKAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L +V A+ K+P PK MRW + +IRP++++ +L E + Sbjct: 123 KGQSAAELLPQMVSEALAKLPIPKPMRWGAYDT-----QFIRPVQTVTLML-----GEHL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 + + GN GHRF + ++ + Y LEE V+ D E R+ I+ D Sbjct: 173 LPATILGKASGNTLLGHRFMGEQVLTIEHAEQYPALLEEQGKVIADYERRKAKIVADIQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G D +LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAEIGGHADLDDELLEEVTSLVEWPVVLTASFEEKFLAVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI VSN+++ D A ++ GN +VV RL DA F++ D+ Sbjct: 293 AEGKLLPKFIFVSNLESKDP-AVVIAGNEKVVRPRLADAEFFFETDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L + IA LI AD A RA Sbjct: 340 --------QTLESLLPRLET--VLFQKQLGTLKDKTDRIQALAEHIAGLIGADRAHAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 LSK DL T +V EF + QG +G YA E + A+ E +PR + +P++ ++ Sbjct: 390 GQLSKCDLMTNMVFEFTDTQGIMGMHYARHDGEAEAVAVALNEQYQPRFAGDELPSSGVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 +++ADK+D+L+ + I + P KDP+ALRRA +GI+RI ++ + + L Sbjct: 450 QALAIADKMDSLVGIFGIGQPPKADKDPFALRRAAIGILRIAVDKALPLDLFDLAAFSYS 509 Query: 531 ------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 ++ F R + + + D+I+A+L + Sbjct: 510 LFAEQEKLDADGKKGAEICNQVVDFMLGRFRAWYQEEGFPADVIQAVLAVRPTRPVDFDR 569 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 +K + F S E + KR+ ILA K I+ ++ L +AEK L +++ Sbjct: 570 RVKAVQHFRSLDAAEALAAANKRVGNILA---KVEGPIADQVDAALLQDDAEKVLADIVA 626 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ Y L + EP++ FF+ V+VN +D +R NR +LL+ ++ + Sbjct: 627 QVAAKVEPMFAAGDYQNALLALADLREPVDAFFEAVMVNAEDPALRANRQALLKQLRQLF 686 Query: 693 LIVINVQ 699 + V ++ Sbjct: 687 MQVADIS 693 >gi|315125117|ref|YP_004067120.1| glycyl-tRNA synthetase subunit beta [Pseudoalteromonas sp. SM9913] gi|315013630|gb|ADT66968.1| glycyl-tRNA synthetase subunit beta [Pseudoalteromonas sp. SM9913] Length = 689 Score = 777 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 214/723 (29%), Positives = 344/723 (47%), Gaps = 62/723 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L +K Sbjct: 1 MSAENLLVEIGTEELPPKSLRKLAEAFAANLTAELESLELAHQGVSWYASPRRLGLQVKA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L +K E+ GP + G KA G+ R G++ ++ D KG L Sbjct: 61 LDAKQQDKEVEKRGPAIKAAFDAEGNPTKAAMGWARGCGIEVKDAQTLETD--KGAWLLH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + + ++ + A+ K+P PK MRW + +IRP+ ++ +L +E Sbjct: 119 IAKVAGQETKLLMADAISKALAKLPIPKPMRWGANKT-----QFIRPVHTVTILLGSE-- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I+ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 172 ---LIEGEILGKQVSNQLQGHRFHHPEKISINHADDVFDVLKSAYVIADYEQRKAQIRAQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A AV + D+DLLEE+ LVEW +F++ +L +P E + T+K +QK F Sbjct: 229 IEDAAKAVNAVVAMDEDLLEEVTSLVEWPVTLTATFEEAFLDVPAEALIYTMKDDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L N F+ VSNI++ D + ++ GN +VV RL DA F++ D+ Sbjct: 289 LLDQNGKLLNKFLFVSNIESKDP-SVVISGNEKVVRPRLADAQFFFETDKK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 K L+ R+ LD V+F ++GT ++ RI L IA+ + AD AL Sbjct: 339 -----------KTLESRLESLD--SVLFQKQLGTLKDKSQRISELAGYIAEQLGADKALA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EF ++QG +G YA E A E PR +N+PT+ Sbjct: 386 ARAGLLSKTDLMTEMVMEFTDVQGVMGMHYARHDGEAEDVAVAQNEQYMPRFAGDNLPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + + + Sbjct: 446 LISCAVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKQLPLDILDLVAK 505 Query: 532 QNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + F R + + D I D+I+A+L + +K Sbjct: 506 SQTLFGEKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + E + KR+ ILA K N ++ L +AEK L + ++ F T Sbjct: 566 VSHFRTLDAAESLAAANKRVSNILA---KNNITTQGDVDQSLLSDDAEKVLASQVAKFAT 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + Y + L I + ++ FFD V+V DD V+ NRL+LL + + L + Sbjct: 623 DLAPLYSDGNYQEALSQLAGIRDSVDNFFDNVMVMADDEAVKQNRLALLSQLSGLFLEIA 682 Query: 697 NVQ 699 ++ Sbjct: 683 DIS 685 >gi|149912060|ref|ZP_01900651.1| glycyl-tRNA synthetase beta subunit [Moritella sp. PE36] gi|149804856|gb|EDM64893.1| glycyl-tRNA synthetase beta subunit [Moritella sp. PE36] Length = 690 Score = 777 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 205/720 (28%), Positives = 337/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + AE + LK+ G+ + ++ P RL L + L+ Sbjct: 5 NLLIEIGTEELPPKSLRTLAEAFAANFQAELKKAGLEFADVSWMAAPRRLALTVTALADS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ +IK D KG+ L Sbjct: 65 QADKVIEKRGPAISVAFDADGNATKAAQGWARGNGITVEQAGRIKTD--KGEWLLHKSEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ +V A+ K+P K MRW + S +IRP+ ++ + ++ Sbjct: 123 KGQATQVLVADMVATALAKLPVSKPMRWGS-----SPIQFIRPVHTVTMLF-----GDEA 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + ++ I GHRF ++ D+Y+ LE+ V++D R+ I Sbjct: 173 LAGEILGIKAARTIRGHRFLGKGDFELPHADNYVDLLEDHGMVMVDYARRKEVIRQQVIA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A G D+ LLEE+ LVEW +G+F+++YL +P E + T+K NQK F + Sbjct: 233 AAEEHGGVAEIDEALLEEVTSLVEWPVTLVGNFEERYLDVPAEALIYTMKDNQKYFPMLS 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI + D +++GN +VV RL DA F+ D+ Sbjct: 293 KDGELLPKFIFVSNIISKDVRQ-VIEGNEKVVRPRLADAEFFFNTDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+A L+ V+F ++GT E+ RI L IA I A+ RA Sbjct: 340 --------RTLESRLADLET--VIFQKQLGTLKEKSQRISDLAAAIAGKISANTEHAQRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+KADL +++V EFP++QG +G YA E A+ E PR + +P + ++ Sbjct: 390 GLLAKADLMSDMVVEFPDVQGVMGMHYARNDGEAEEVAIALNEQYMPRYAGDRLPESLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +V+LADKLDTL+ + I + P G KDP+ALRRA +G +RII+E + + L ++ Sbjct: 450 CSVALADKLDTLVGIFGIGQIPKGDKDPFALRRAAIGTLRIIIEKDLPLDLVDLVDTAKL 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + D I D+I+A+L +K +N Sbjct: 510 LFGDKLSNQNVSTDVVAFILGRFPAWYKDAGISVDVIQAVLARRPTKPADFDKRVKAVNH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + KR+ ILA K E++ + L +AEK L A + + Sbjct: 570 FRGLDAAATLAAANKRVGNILA---KFEGELNTTVDTSLLQEDAEKALAAAVDAKVELLT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y Q L + + ++ FFD V+V DD ++ NRL+LL ++N L V ++ Sbjct: 627 PLFAAGDYQQALTELSELRDVVDTFFDNVMVMADDEALKINRLTLLNTLRNQFLNVADIS 686 >gi|310765834|gb|ADP10784.1| glycyl-tRNA synthetase subunit beta [Erwinia sp. Ejp617] Length = 689 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 334/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAESFAANLTAELDAAGLAHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LSAAQPDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 R + +L +V ++ K+P PK MRW S ++RP+ ++ +L Sbjct: 119 RARVTGERTQLLLPAMVATSLAKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ ++ I GHRF + D Y + LE V D E R+ I Sbjct: 169 GDELVPANILGIDSARTLRGHRFMGEPAFTIDHADQYPQILLERGKVQADYEARKAIIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDKAGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFNSDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ + RL+ V+F ++GT + RI+ L +A I ADV Sbjct: 340 ------------RRLEDNLPRLET--VLFQKELGTLRAKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGNKLSNAKAVDEVIDFMLGRFRTWYQEEGHSVDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +D+EVR NRL+LL ++ + L V Sbjct: 623 SKLQPFFAEGRYQDALIELAQLRETVDNFFDKVMVNAEDKEVRINRLTLLARLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|197286684|ref|YP_002152556.1| glycyl-tRNA synthetase subunit beta [Proteus mirabilis HI4320] gi|238693195|sp|B4EZ95|SYGB_PROMH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|194684171|emb|CAR45626.1| glycyl-tRNA synthetase beta subunit [Proteus mirabilis HI4320] Length = 690 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 195/720 (27%), Positives = 339/720 (47%), Gaps = 60/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + + ++ + P RL + + ++ Sbjct: 5 TFLVEIGTEELPPKALRSLAESFATHFTAELDNANITHGDVSWFAAPRRLAIKVANMAKS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++I E+ GP + G KA +G+ R G+ ++ D KG+ Sbjct: 65 QADRIVEKRGPAIAQAFDAEGKPTKAAEGWARGNGITVDQAERLSTD--KGEWLFYRAEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L +V A+ K+P PK MRW + ++RP+ ++ +L + + Sbjct: 123 KGEAVNQLLAGMVSNALAKLPIPKLMRWGDKET-----HFVRPVHTVTLLL-----GDTL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ID ++ + I GHRF + + D Y L E V+ D E R++ IL+DA Sbjct: 173 IDGEILGVQSARIIRGHRFMGEAEFTIDNADQYPEILYERGKVIADYENRKSIILHDARL 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAEKLGGVADLSDSLVEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI++SD I+ GN +VV RL DA F+K D+ Sbjct: 293 KQGALLPHFIFVSNIESSDP-QQIISGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F +G+ ++ RI+ L IA+ + ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQKNLGSLRDKTDRIQALAGFIAEKMGADVNKATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A++E +PR + +P+N ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALKEQYQPRFAGDALPSNPVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V++A+K+DTL + I + P G KDP+ALRRA LG++RII+E + + + + ++ Sbjct: 450 SAVAIAEKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEQDLPLDIEELTQEAAR 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + + D I+A+L +K + Sbjct: 510 LYGDKLTNQNVVSDVVEFMLGRFRAWYQELGYSIDTIQAVLARRPTQPADFNARVKAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA + + +++ ++ L E +L A +S + Sbjct: 570 FRTLEEAAALAEANKRVSNILA--KSADVKLNDKVLASVLKAPEEVQLAANLSVLQDKLA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++Y + L S+ + + FFD+V+V D E+R NRL++L ++ + L V ++ Sbjct: 628 PLFAERKYQEALVELASLRDVVNNFFDKVMVMDKDEEIRVNRLTMLHELRELFLKVADIS 687 >gi|83955610|ref|ZP_00964190.1| glycyl-tRNA synthetase beta subunit [Sulfitobacter sp. NAS-14.1] gi|83839904|gb|EAP79080.1| glycyl-tRNA synthetase beta subunit [Sulfitobacter sp. NAS-14.1] Length = 706 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 279/729 (38%), Positives = 406/729 (55%), Gaps = 53/729 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L + G+ Y + + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLKKLVTNGLVDAGLTYASAAAFSTPRRLTLTIEGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A +KAI+GFLR GL + +D KG + A++ KP R Sbjct: 61 DASPSLVEERKGPKADAPEKAIEGFLRGAGLTRDQLEE--RDTPKGKILFAMINKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + + W+RPL SILCIL AED + + L + Sbjct: 119 AEIVADVLETTIRNFPWPKSMRWGSG-----SLRWVRPLHSILCILSAED-GAQTVPLTI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP I V S D Y L+ A V+LDP RR+ I NDA +A A G Sbjct: 173 DGITAGDTTRGHRFLAPDTITVSSFDDYSAKLKRAFVVLDPAERRDTIWNDATNMAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVE+ V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEYPVVLMGQIGDDFLGLPPEVLQTSMKEHQKFFSVRNPKSGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW+ D + + ++ Sbjct: 293 ERFVTVANRTTADDGATILAGNEKVLSARLSDAKFFWENDLRIAQSEAGMQ--------- 343 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + RL +V FH K+GTQ E +SR+ L ++A + AD A +KA Sbjct: 344 ------TWVDRLS--NVTFHNKLGTQAELISRMEALAGELAPTVGADAEEARAAARFAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA ++ + A ++H P GP ++VPT +SI V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGSYYAKAAGKSEAIAAAAQDHYAPLGPSDDVPTAPVSIAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------ 528 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + + L Sbjct: 456 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDVSLKLRDTILEHLSQAPAPA 515 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP----------ENDNLLTIVDL 573 +NL+ F HDRLK+YL D+ +RHD+I+A + ND+L +V Sbjct: 516 AGSAEETAENLLSFLHDRLKVYLKDQGVRHDIIDACISSSDGAPAGATEGNDDLTLLVKR 575 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVIS 632 K L+E + GE + KR IL+ E + E S ++ E E+ L+A + Sbjct: 576 AKALSETLKTDDGENLIQGFKRANNILSQAEDADGVEYSFGADIKFAETEEERALFAALD 635 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I+ +M+ + + + S+ PI+ FFD V VN D+ VR NRL+LL I+ I Sbjct: 636 TAEAQIKPAMEAQDFGTAMSAMASLRGPIDAFFDAVQVNADNATVRRNRLNLLSRIRTIC 695 Query: 693 LIVINVQKI 701 V ++ KI Sbjct: 696 SSVADLTKI 704 >gi|332533695|ref|ZP_08409554.1| glycyl-tRNA synthetase beta chain [Pseudoalteromonas haloplanktis ANT/505] gi|332036859|gb|EGI73320.1| glycyl-tRNA synthetase beta chain [Pseudoalteromonas haloplanktis ANT/505] Length = 689 Score = 776 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 212/723 (29%), Positives = 341/723 (47%), Gaps = 62/723 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L +K Sbjct: 1 MSAQNLLVEIGTEELPPKALRKLAEAFAANLTQELETLELAHQGVSWYASPRRLGLQVKA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L +K E+ GP G KA G+ R G++ ++ D KG L Sbjct: 61 LEAKQQDKEVEKRGPATKAAFDSEGNPTKAAMGWARGCGIEVKDAQTLETD--KGAWLLH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + + ++ + A+ K+P PK MRW + +IRP+ ++ + Sbjct: 119 IAKVAGQETKTLMTDAITKALSKLPIPKPMRWGANKT-----QFIRPVHTVTILF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++++ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 169 GDELLEGEILGKQITNQLQGHRFHHPEKISINHADDVFDVLKSAYVIADYEQRKAQIRAQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ASAV + D+DLLEE+ LVEW +F++ +L +P E + T+K +QK F Sbjct: 229 IEEAASAVNAVVAMDEDLLEEVTSLVEWPVTLTATFEEAFLDVPAEALIYTMKDDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L N F+ VSNI++ D + ++ GN +VV RL DA F++ D+ Sbjct: 289 LLDQNGKLLNKFLFVSNIESKDP-SVVISGNEKVVRPRLADAQFFFETDKK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 K L+ R+ LD V+F ++GT ++ RI L IA+ + AD L Sbjct: 339 -----------KTLESRLESLD--SVLFQKQLGTLKDKSERISELAGYIAEQLGADKDLA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EF ++QG +G YA E A E PR +N+PTN Sbjct: 386 QRAGLLSKTDLMTEMVMEFTDVQGVMGMHYARHDGEAEDVAVAQNEQYMPRFAGDNLPTN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + + + Sbjct: 446 LISCAVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKELPLDILDLVAK 505 Query: 532 QNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + F R + + D I D+I+A+L + +K Sbjct: 506 SQTLFGDKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + E + KR+ ILA K + + L +AEK L + ++ F T Sbjct: 566 VSHFRTLDAAEALAAANKRVGNILA---KNDITSQGSVDESLLSDDAEKVLASQVAKFAT 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + Y + L I E ++ FFD V+V DD V+ NRL+LL + + L + Sbjct: 623 DLAPLYADGNYQEALSQLAGIRESVDNFFDNVMVMADDEAVKQNRLALLNQLSGLFLGIA 682 Query: 697 NVQ 699 ++ Sbjct: 683 DIS 685 >gi|259910253|ref|YP_002650609.1| glycyl-tRNA synthetase subunit beta [Erwinia pyrifoliae Ep1/96] gi|224965875|emb|CAX57408.1| Glycyl-tRNA synthetase beta subunit [Erwinia pyrifoliae Ep1/96] gi|283480370|emb|CAY76286.1| glyS [Erwinia pyrifoliae DSM 12163] Length = 689 Score = 775 bits (2001), Expect = 0.0, Method: Composition-based stats. Identities = 202/724 (27%), Positives = 334/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAESFAANLTAELDAAGLPHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LSAAQPDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 R + +L ++ ++ K+P PK MRW S ++RP+ ++ +L Sbjct: 119 RARVTGERTQVLLPAMIATSLAKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 ++++ ++ I GHRF + D Y + LE V + E R+ I Sbjct: 169 GDELVPANILGIDSARTLRGHRFMGEPAFTIDHADQYPQILLERGKVQANYEVRKAIIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLSDSLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDKAGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFNSDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ + RL+ V+F ++GT + RI+ L +A I ADV Sbjct: 340 ------------RRLEDNLPRLET--VLFQKELGTLRAKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + +I F R + + + D ++A+L +K Sbjct: 506 EAVRLYGNKLSNAKAVDEVIDFMLGRFRTWYQEEGHSVDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +D++VR NRL+LL ++ + L V Sbjct: 623 SKLQPFFAEGRYQDALIELAQLRETVDNFFDKVMVNAEDKKVRINRLTLLAKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|167630520|ref|YP_001681019.1| glycyl-tRNA synthetase, beta subunit [Heliobacterium modesticaldum Ice1] gi|167593260|gb|ABZ85008.1| glycyl-tRNA synthetase, beta subunit [Heliobacterium modesticaldum Ice1] Length = 691 Score = 774 bits (1999), Expect = 0.0, Method: Composition-based stats. Identities = 217/729 (29%), Positives = 343/729 (47%), Gaps = 72/729 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA+ A L + L+E + Y + Y TP RL LY+K ++ Sbjct: 5 DLLLEIGTEEIPAKFIPSALAQLRQLAEKGLQEARLAYGAVETYGTPRRLTLYVKQVAAQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G KA GF RS G+ + + +D A+ + Sbjct: 65 QEDLRLEVKGPAVKAGFDKEGNPTKAAQGFARSQGVDVSA--LVTRDLAGVPYLYALRTE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R DVL ++ I + +PK MRW+ + RP++ I+ + E++ Sbjct: 123 SGRPARDVLPQLLQGCISGLSFPKPMRWA-----WGETRFARPIRWIVALY-----GEEV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++++ + G TYGHRF PI++ Y+ LE+A V+ DP R+ I L Sbjct: 173 IPVEVEGVQAGRTTYGHRFLGGGPIELTRPSEYLERLEKAYVIADPHKRKAMIWKQITEL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+AVG ++ ED+ LL+EI LVE+ G D Y+ LPE ++ +K +Q+ F ++ Sbjct: 233 AAAVGGQVAEDEGLLDEINYLVEYPTALCGEVDADYMHLPEAVLITPMKEHQRYFPVKSP 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V N ++ + + GN +V+ ARL DA F+ DQ Sbjct: 293 SGGLLPTFITVRNG-TAEHLSIVRAGNEKVLRARLADAAFFYAEDQK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VD 412 PLD + +L +VF +GT ERV R + L +A ++ L Sbjct: 339 -------TPLDAQKEKLK--KIVFQESLGTVYERVEREQALTAFLADCMNVPAVLREGAL 389 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+KADL T +V EFPELQG +G+ YA+L E AI EH +PR + VP+ Sbjct: 390 RAAELAKADLVTHMVYEFPELQGIMGERYALLSGEAPEVAQAIREHYQPRFSGDAVPSTM 449 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 V+LADK+D ++ ++I P+GS+DPYALRR G+ +II+ + + L+ IE Sbjct: 450 EGTLVALADKIDAIVGCFSIGIIPTGSQDPYALRRQAQGVCQIIMRGNLPLSLAAVIEKS 509 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++L+ FF RL+ L + IR+D I+A+L D ++ Sbjct: 510 YNLYAAAGRPTRSLEETQKDLLEFFRQRLRFLLGEEGIRYDTIDAVLAEGFDQPAEVLKR 569 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 K L++F + + + R + S I P E LY + Sbjct: 570 AKALSDFRQAEAFSALITAYTRAANLAKKGG------SEPIRPDLFEQATEGELYKALQA 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++++ Y I + ++ ++ FFD V+V D+ +R+NRL+LL + + Sbjct: 624 AEEQVRQA--DGDYSTILAAVAALRPAVDAFFDAVMVMADEPVIRENRLALLNGVIGLTR 681 Query: 694 IVINVQKIV 702 V ++ K+V Sbjct: 682 GVADLSKLV 690 >gi|316932589|ref|YP_004107571.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris DX-1] gi|315600303|gb|ADU42838.1| glycyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris DX-1] Length = 746 Score = 774 bits (1999), Expect = 0.0, Method: Composition-based stats. Identities = 305/766 (39%), Positives = 420/766 (54%), Gaps = 87/766 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ I+PV ++ PWPKSMRW + A W+RPL SI+ + + ++ ++ Sbjct: 121 IEVIAEILPVIVRTFPWPKSMRWGARSAKPGALQWVRPLHSIVATFGIDTEEPDVVHFNV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP +V+ + Y L A V+LDP+ RR+ IL DA LA A Sbjct: 181 DGIEAGQTTRGHRFMAPDAFEVRRFEDYEAKLFAAKVVLDPQRRRDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED LL+E+ GLVEW MGSFDK +L +P+E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDAGLLDEVSGLVEWPVPLMGSFDKDFLSIPDEVIRATIRANQKCFVVADPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA F++ D Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ ER+ RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPKFD--QIVFHEKLGTQAERIERIERLAAEIAPLVGADVEKTKRAAKLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-----DQNL 534 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR+I++NK+ + + + Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLIVDNKLRLNIFDLSARPFARNAKA 518 Query: 535 ILFFHDRLKLYLHDR------------------DIRH------DLIEAILRPENDNLLT- 569 +LF R + L R R+ DL+ +R +LL+ Sbjct: 519 VLFDEFRAAMELVQRVEDELPPGTIISISELATAFRYRQIAEADLVAGQMRKAALDLLSF 578 Query: 570 ---------------------------------IVDLIKHLNEFFSSAKGEKFLLSAKRI 596 IV ++ L F ++ G+ L KR Sbjct: 579 FADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLAGTKRA 638 Query: 597 FQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL IEEKK+ R + E+ L A I ++ + + + Sbjct: 639 ANILRIEEKKDGRAFDGAPDASLYAQDEERALAAAIDRAKAEAGAAVAKEDFAAAMTAMA 698 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 699 GLRPAVDAFFDKVTVNADDKAVRENRLKLLNEIRAATRAVADFSKI 744 >gi|238798356|ref|ZP_04641839.1| Glycyl-tRNA synthetase beta subunit [Yersinia mollaretii ATCC 43969] gi|238717814|gb|EEQ09647.1| Glycyl-tRNA synthetase beta subunit [Yersinia mollaretii ATCC 43969] Length = 682 Score = 773 bits (1998), Expect = 0.0, Method: Composition-based stats. Identities = 201/716 (28%), Positives = 323/716 (45%), Gaps = 61/716 (8%) Query: 7 EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEK 66 EI +EE+P + AE + L + + + Y P RL + + LS ++ Sbjct: 2 EIGTEELPPKALRSLAESFAANFTAELDNANLPHGEVVWYAAPRRLAVKVAHLSAAQADR 61 Query: 67 IEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 62 EVEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLVTD--KGEWLLYRAHVKGES 119 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + +L +V A+ K+P PK MRW + ++RP+ ++ +L +E +I Sbjct: 120 AQLLLAGMVNAALSKLPIPKLMRWGDKET-----QFVRPVHTVTMLLGSE-----LISGT 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASA 238 + I I GHRF + + D Y + L E V+ D E R+ I DA A Sbjct: 170 VLGIDSDRIIRGHRFMGEAEFALDNADQYPQLLLERGKVIADYELRKTIIKRDAELAAQK 229 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +G + LLEE+ LVEW V F++K+L +P E + T+K +QK F G Sbjct: 230 MGGVADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDTAGH 289 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 290 LLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK---------------- 332 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+ + RL+ V+F ++GT ++ RI+ L +A I ADV RA +LS Sbjct: 333 ----KRLEDNLPRLE--SVLFQQQLGTLRDKTDRIQALAGWVAAQIGADVNHATRAGLLS 386 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EF + QG +G YA E A+ E +PR +++P+N ++ ++ Sbjct: 387 KCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALA 446 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ------ 532 +ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E+ Sbjct: 447 IADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTEEAVRLYGS 506 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 +I F R + + D D I+A+L +K + F + Sbjct: 507 KLTNTKVVDEVIEFMLGRFRAWYQDEGHSVDTIQAVLARRPTRPADFDARVKAVTYFRTL 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + KR+ ILA K ++ + L AE +L + ++ Sbjct: 567 DAAATLAAANKRVSNILA---KSTDTLNDHVHASVLKEPAELKLATHLVVLRDKLEPVFA 623 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +Y + L ++ E ++ FFD V+V +D VR NRL+LL ++ + L V ++ Sbjct: 624 AGQYQEALVELAALRETVDEFFDSVMVMAEDDAVRVNRLTLLSKLRELFLQVADIS 679 >gi|188535522|ref|YP_001909319.1| glycyl-tRNA synthetase subunit beta [Erwinia tasmaniensis Et1/99] gi|238689720|sp|B2VCH1|SYGB_ERWT9 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|188030564|emb|CAO98459.1| Glycyl-tRNA synthetase beta chain [Erwinia tasmaniensis Et1/99] Length = 689 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 203/724 (28%), Positives = 335/724 (46%), Gaps = 63/724 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D FL+EI +EE+P + AE + L L G+ + + + P RL L + Sbjct: 1 MTDKTFLVEIGTEELPPKALRSLAESFAANLTAELDAAGLAHGEVSWFAAPRRLALKVAN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ E+ GP + G KA +G+ R G+ ++ D KG+ + Sbjct: 61 LSAAQPDREVEKRGPAIQAAFDANGVATKAAEGWARGCGITVDQAERLSTD--KGEWLMY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 R + +L ++ ++ K+P PK MRW S ++RP+ ++ +L Sbjct: 119 RARVTGERTQVLLPAMIATSLAKLPIPKLMRWGA-----SEVQFVRPVHTVTLLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILN 230 +++I ++ I I GHRF + D Y + LE V D R+ I Sbjct: 169 GDELIPANILGIDSARIIRGHRFMGEPEFTIDHADQYPQILLERGKVQADYAARKAIIKA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 DA A+ +G LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 229 DAEAAAAKIGGVADLSDSLLEEVTSLVEWPVVLTATFEEKFLAVPAEALVYTMKGDQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 289 PVYDKAGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFNSDRK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ + RL+ V+F ++GT + RI+ L +A I ADV Sbjct: 340 ------------RRLEDNLPRLET--VLFQKELGTLRAKTDRIQALAGWVAAQIGADVNH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ Sbjct: 386 ATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDELPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E + + L E Sbjct: 446 NPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLPLDLQTLTE 505 Query: 531 DQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + ++ F R + + + D ++A+L +K Sbjct: 506 EAVRLYGSKLSNAKAVDEVVDFMLGRFRTWYQEEGHSVDTLQAVLARRPTRPADFDARMK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F + + + KR+ ILA K ++ + L E +L ++ Sbjct: 566 AVSHFRTLEQAASLAAANKRVSNILA---KATEPLNDSVQASLLKENEEIKLATYVTALS 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + +Q RY L + E ++ FFD+V+VN +++EVR NRL+LL ++ + L V Sbjct: 623 SKLQPFFAEGRYQDALIELAQLREAVDNFFDKVMVNAEEKEVRINRLTLLAKLRELFLQV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|312882229|ref|ZP_07741975.1| glycyl-tRNA synthetase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] gi|309370073|gb|EFP97579.1| glycyl-tRNA synthetase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] Length = 686 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 210/721 (29%), Positives = 341/721 (47%), Gaps = 64/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +EE+P AE + LKE + +Q ++ + P RL L + L+ Sbjct: 3 KEFLIELGTEELPPTQLRTLAEAFASNFTTELKEAELDHQGIKWFAAPRRLALKVTELAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 63 SQADKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGIAVEQAERMVTD--KGEWLLFKQE 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++ + A+ K+P K MRW + +IRP+K++ +L +E Sbjct: 121 VKGQSTTAIVVELAAKALAKLPIAKPMRWGDKTT-----QFIRPVKTLTILLGSE----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAH 233 +I+ ++ + GHRF ++S + Y LE V+ D E R+ IL DA Sbjct: 171 LIEGEILGVQSSRTLRGHRFMGEQEFTIESAEQYPEILETRGKVMADYEARKALILADAQ 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + ASA+G + +L+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 231 KAASAIGGLADLEDELVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 T + L FI VSNI++ D +++GN +VV RL DA F+ D+ Sbjct: 291 TEDKKLLPNFIFVSNIESKDPRQ-VIEGNEKVVRPRLADAEFFFNTDRK----------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL R+ LD +F ++GT ++ RI L IA I ADV +R Sbjct: 339 ---------RPLIDRLPELDSA--IFQKQLGTIKDKTDRITELAGYIANKIGADVEKSER 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P++ + Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDTLPSDGV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S V+LADKLDT++ + I + P GS DP+ALRRA+LG++RII+E D+ L I Sbjct: 448 STAVALADKLDTIVGIFGIGQAPKGS-DPFALRRASLGLLRIIVEYGYDLDLVDLIAKAK 506 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +I F R + + D+ D+I+A+L +K ++ Sbjct: 507 SLFGSRLTNESVEHEVIDFMLGRFRAWYQDQGFSIDVIQAVLARRPTKPADFDQRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KR+ ILA K ++ + L E E+ LY + + Sbjct: 567 HFRTLDAAEPLAAANKRVSNILA---KFEGDLPERVDETLLTEEPEQALYQAL--ATPAV 621 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + Y Q L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 622 SIELKNGGYQQQLTQLAELREPVDKFFDNVMVMADDEALKKNRLTLLNQLRNLFLQIADI 681 Query: 699 Q 699 Sbjct: 682 S 682 >gi|37524312|ref|NP_927656.1| glycyl-tRNA synthetase subunit beta [Photorhabdus luminescens subsp. laumondii TTO1] gi|81833305|sp|Q7MB99|SYGB_PHOLL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|36783735|emb|CAE12589.1| glycyl-tRNA synthetase beta chain (glycine--TRNA ligase beta chain) (GlyRS) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 689 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 202/720 (28%), Positives = 332/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + AE + L + Y + + TP RL L + L Sbjct: 5 TFLVEIGTEELPPKALRSLAEAFAANFAAELDNANLAYGEISWFATPRRLALKVANLDEA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA +G+ R G+ ++ D KG+ L Sbjct: 65 QADREVEKRGPAIAQAFDTEGKPTKAAEGWARGCGITAAQAERLVTD--KGEWLLYRALV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R ++++L +V A+ K+P PK MRWS + + RP+ ++ + +++ Sbjct: 123 KGRSVKELLAAMVNSALNKLPIPKLMRWSDKET-----QFARPVHTVTMLF-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ I + GHRF + + + Y L++ VL D R+ I D + Sbjct: 173 IEGEILGIKSARVIRGHRFMGESEFAIDNAEQYPEILQQRGRVLADYTTRKVLIKQDVEQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G LLEE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 233 AAIKLGGVADISDSLLEEVTSLVEWPVVLTAKFEEKFLEVPAEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI +SD I+ GN +VV RL DA F+K D+ Sbjct: 293 NAGKLMANFIFVANIDSSDP-QQIIDGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ + RL+ V+F ++GT ++ RI+ L IA+ I ADV RA Sbjct: 340 --------QRLEDNLPRLET--VLFQKQLGTLRDKTDRIQALAGWIAEKIGADVNHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E A+ E +PR + +P+ +S Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYQPRFAGDELPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++ADK+DTL + I + P G KDP+ALRRA LG +RII+E K+ + L E+ Sbjct: 450 CALAIADKMDTLAGIFGIGQHPRGDKDPFALRRAALGALRIIVEKKLPLDLQTLTEEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + ++ R D I+A+L +K + Sbjct: 510 LYGDKLTNAKVTDDVVEFMLGRFRAWYQEQGYRVDTIQAVLARRPTQPADFDARVKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K ++ ++ L E +L + + Sbjct: 570 FRTLDEAAALAAANKRVSNILA---KSEETLNEKVDVSTLKAPEEVKLATHLIVLQDKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ E ++ FFD V+V +D +VR NRL+LL ++++ L V ++ Sbjct: 627 PLFAEGHYQEALVELASLREVVDAFFDNVMVMDEDLQVRVNRLTLLSELRDLFLRVADIS 686 >gi|59710623|ref|YP_203399.1| glycyl-tRNA synthetase subunit beta [Vibrio fischeri ES114] gi|81311051|sp|Q5E8Y5|SYGB_VIBF1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|59478724|gb|AAW84511.1| glycyl-tRNA synthetase, beta subunit [Vibrio fischeri ES114] Length = 688 Score = 772 bits (1994), Expect = 0.0, Method: Composition-based stats. Identities = 210/721 (29%), Positives = 345/721 (47%), Gaps = 62/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +EE+P AE + LK + +Q ++ Y TP RL L + L+ Sbjct: 3 KNFLIELGTEELPPTALRSLAEAFASNFEAELKAADLAHQGVKWYATPRRLALKVAELAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 63 SQADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVEQADRLKTD--KGEWLLHKEE 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +++++ A+ +P PK+MRW + +IRP+K++ +L ++ Sbjct: 121 VKGKPVQELVVDFAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTILL-----GDE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ + + GHRF + S D Y LEE V+ D + R+ IL D+ Sbjct: 171 LIEGSILGVSSARTLRGHRFMGESEFTIDSADQYPAILEERGKVMADYDARKAIILADSE 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A+AVG + + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 231 KAAAAVGGKADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 291 DENKKLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFFFNTDRK----------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV R Sbjct: 339 ---------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKSQR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ I Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPSTDI 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S V++ADKLDTL+ + I + P GS DP+ALRRA LG++RII+E + ++ L + Sbjct: 448 SSAVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKEYNLDLVDLVAKAQ 506 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++I F R + + D D+I+A+L +K ++ Sbjct: 507 SLFGDKLSNANVATDVIDFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDKRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F E + KR+ ILA K + E++ EI L +AEK L + + Sbjct: 567 HFRELDAAESLAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEKVEILAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPVFAAGNYQEALSRLAELREPVDAFFDNVMVMADDEALKTNRLTLLNKLRNLFLDIADI 683 Query: 699 Q 699 Sbjct: 684 S 684 >gi|254471700|ref|ZP_05085101.1| glycyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] gi|211958902|gb|EEA94101.1| glycyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] Length = 745 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 300/771 (38%), Positives = 412/771 (53%), Gaps = 96/771 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL +L L E GV Y+ + Y TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRRAAEDLKSLLTNALVEAGVTYEGAKAYATPRRLALHIAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPRVGA +KA+ GFLR GL +I + ++ DPKKGD Y+AV+ KP R Sbjct: 61 AGSKATREERKGPRVGAPEKALAGFLRGAGLTSIEEAEVHNDPKKGDFYVAVIEKPGRKT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ED++ ++P I+ PWPKS RW + + W+RPL SI+C E + ++I ++ Sbjct: 121 EDIVADVMPDIIRNFPWPKSQRWGSGN-----LRWVRPLHSIVCTFGPETEEPEVIPFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP I+V+ L+ Y+ LE A V+LD + R++ I DA A A+G Sbjct: 176 DGITSGQTTYGHRFMAPEAIEVRRLEDYMSKLEAAKVVLDADRRKDIIDTDAKNAAMALG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 LELVED LLEE+ GL EW V +GS+D+ +L LP+E+I+LTIK NQK FV R L Sbjct: 236 LELVEDAGLLEEVAGLNEWPTVLIGSYDESFLQLPDEVIQLTIKVNQKNFVLRDPATSNL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N F L +NI A DGG I+ GN +VV+ARL DA FW+ D Sbjct: 296 SNKFALTANIVAKDGGTKIIAGNEKVVSARLSDAKFFWETD------------------- 336 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ +++L D+VFH K+G+ RV R+ L +IA L+ AD+ RA L+K Sbjct: 337 -LKTKLESNVSKLQ--DIVFHEKLGSVAARVDRLERLAAEIAPLVGADIEQTKRAARLAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G+ YA Q E+ + AIE+H KP G ++VPT+ +SI V+L Sbjct: 394 ADLVSAMVFEFPELQGLMGRYYAEAQGEDAAVAQAIEDHYKPAGASDDVPTSPVSIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---NLIL 536 ADKLD L FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + +PL + NL Sbjct: 454 ADKLDILAGFWAIDEKPTGSKDPFALRRAALGVIRLVLENDLRLPLRDVLVQSLRRNLAD 513 Query: 537 FFHDRLKLYLHD----------RDIRHDLI-------EAILR------------------ 561 R + L D + D+ + +L Sbjct: 514 IAAARGESALSDLPFIGKGKTGEGVVKDIFSMVSKAADVVLANVSDKIPETSLETGLIDD 573 Query: 562 -----------------------------PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 D++ IV + L S G L Sbjct: 574 LLGFFADRMKVVLKDKGVRHDLIDAVLARGGQDDIALIVKQAEALAGLLGSEDGANLLAG 633 Query: 593 AKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL EEKK+ + + L +AEK L A + I+ +D + Sbjct: 634 YKRAANILRAEEKKDGKTFEGKPDAALLEEQAEKDLAAALDSVLVEIKPLLDSADFSGAM 693 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L + P++ FFD + VN + EVR+NRL +L I+ + V + KI Sbjct: 694 AALAKLRGPVDGFFDNIHVNAEKPEVRENRLKILSEIRAAVHQVADFSKIA 744 >gi|209696359|ref|YP_002264290.1| glycyl-tRNA synthetase subunit beta [Aliivibrio salmonicida LFI1238] gi|238064847|sp|B6EGT3|SYGB_ALISL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|208010313|emb|CAQ80649.1| glycine-tRNA synthetase, beta subunit [Aliivibrio salmonicida LFI1238] Length = 688 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 212/723 (29%), Positives = 346/723 (47%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + LK G+ +Q ++ Y TP RL L + L Sbjct: 1 MAKNFLIELGTEELPPKALRSLAEAFAANFEAGLKAAGLAHQGIKWYATPRRLALKIAEL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 +KI E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 61 DEGQADKIVEKRGPAIASAFDADGNPTKAAQGWARGNGITVEQAERLKTD--KGEWLLHK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++ ++ + A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 EEVKGQPVKGLVVELAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTILL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +++I+ + + GHRF + S D Y LEE V+ D + R+ IL Sbjct: 169 DELIEGTILGVASTRTIRGHRFMGESEFTIDSADQYPAILEERGKVMADYDARKAIILAG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A AVG + +L+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AKKAAEAVGGIADLEDELVEEVTSLVEWPVVLTAKFEQEFLNVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +E L FI V+NI++ + I++GN +VV RL DA F+ D+ Sbjct: 289 VYDQEKNLLPNFIFVTNIESKEPR-HIIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 QRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDAQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S +V++ADKLDTL+ + I + P GS DP+ALRRA LGI+RII+E ++ L + Sbjct: 446 DVSASVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGILRIIVEKGYNLDLVDLVAK 504 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + + D D+I+A+L +K Sbjct: 505 AQSLFGDKLTNANVDTDVIDFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELDAAESLAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKVLAEKVEILAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPVFIAGNYQEALSRLAELREPVDAFFDGVMVMADDEALKLNRLTLLNKLRNLFLDIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|323703326|ref|ZP_08114976.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum nigrificans DSM 574] gi|323531689|gb|EGB21578.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum nigrificans DSM 574] Length = 694 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 225/732 (30%), Positives = 344/732 (46%), Gaps = 71/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PAR A L + L+E+ ++Y ++ Y TP RL LY+K Sbjct: 1 MAKDFLLEIGIEEMPARFLAPALAQLKELTAKTLQEQRIVYGDIATYGTPRRLVLYVKDA 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +E GP G KAI GF+RS G+ + + + + AV Sbjct: 61 AEDQAPLEKEVKGPAKKAAFDIDGNPTKAIQGFMRSQGVSLED--LVVRHIGQVEYLYAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R+ R DVL I P I + +PK MRW + + RP++ +L + Sbjct: 119 KREAGRPTADVLAEICPALITGLHFPKPMRWGSLE-----MRFARPIRWLLALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + ++ +L + ITYGHRF + + + Y + +A VL+DP R+ I Sbjct: 169 DDVVPFELANLKSNRITYGHRFLTTGDLPIANPADYFDRIRKAYVLIDPVERKEVIRQQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+A G ++ D+DLL+EI +VEW GSFD+ YL LP ++ ++ +Q+ F Sbjct: 229 QELAAAEGGQVEMDEDLLDEITNIVEWPTALCGSFDRDYLKLPAAVLVTPMREHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N FI V N + GN +V+ ARL DA F++ D Sbjct: 289 LGPDGQLLNKFIAVRNG-TKAYLDIVTAGNEKVLRARLADAAFFFEED------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---A 409 L KPL ++ L VVF +GT ++V RI L +A+L+ AD Sbjct: 336 --------LKKPLASKVDGLK--KVVFLEGLGTVADKVDRIGALADHLAELLGADEQQQE 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA +L+KADL T +V EFPELQG +G+EYA+ E+ +AI +H PR + +P Sbjct: 386 KIQRAALLAKADLVTNMVYEFPELQGVMGREYALRNGEDPDVAEAIFQHYLPRFAGDQLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +SLADK+DT++ +AI +P+GS DPYALRR LGI II E + + L Q I Sbjct: 446 NTLAGRVLSLADKMDTIVGCFAIGIQPTGSADPYALRRQALGICHIITEGNLHLSLKQMI 505 Query: 530 EDQ-------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 E + FF R+K + DR + +D +EA+L D++ Sbjct: 506 EWAYQGYSAEVELKYTLPQVAGEIEEFFKQRIKGMMSDRGLSYDTVEAVLAVGFDDITDA 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 L F + + R + I+ YL AE LY Sbjct: 566 FARGAALTSFRDQPAFNALMTAFNRANNLAKNA------TGGAINEAYLEHPAEHELYRQ 619 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ +Q + + Y + +I P+ FF+QV+V V+D ++ NRL+LL+ + + Sbjct: 620 LTALTQKVQPLIQSRDYVAALREIAAIQAPLNEFFEQVMVMVEDERIKTNRLALLKNLVD 679 Query: 691 IILIVINVQKIV 702 + V + K+V Sbjct: 680 LSKTVADFSKVV 691 >gi|197334221|ref|YP_002154788.1| glycyl-tRNA synthetase, beta subunit [Vibrio fischeri MJ11] gi|238690288|sp|B5FEW0|SYGB_VIBFM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197315711|gb|ACH65158.1| glycyl-tRNA synthetase, beta subunit [Vibrio fischeri MJ11] Length = 688 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 210/721 (29%), Positives = 346/721 (47%), Gaps = 62/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +EE+P AE + LK + +Q ++ Y TP RL L + L+ Sbjct: 3 KNFLIELGTEELPPTALRSLAEAFASNFEAELKAADLAHQGVKWYATPRRLALKVAELAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 63 SQADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVEQAERLKTD--KGEWLLHKEE 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +++++ A+ +P PK+MRW + +IRP+K++ +L ++ Sbjct: 121 VKGKPVQELVVDFAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTILL-----GDE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ + + GHRF + S D Y LEE V+ D + R+ IL D+ Sbjct: 171 LIEGSILGVSSARTLRGHRFMGESEFTIDSADQYPAILEERGKVMADYDARKAIILADSE 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A+AVG + + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 231 KAAAAVGGKADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFPVY 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 291 DENKKLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFFFNTDRK----------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV R Sbjct: 339 ---------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKSQR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ I Sbjct: 388 AGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPSTDI 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 S +V++ADKLDTL+ + I + P GS DP+ALRRA LG++RII+E + ++ L + Sbjct: 448 SASVAMADKLDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKEYNLDLVDLVAKAQ 506 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++I F R + + D D+I+A+L +K ++ Sbjct: 507 SLFGDKLSNANVATDVIDFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDKRVKAVS 566 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F E + KR+ ILA K + E++ EI L +AEK L + + Sbjct: 567 HFRELDAAESLAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEKVEILAEAL 623 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + ++ Sbjct: 624 EPVFAAGNYQEALSRLAELREPVDAFFDNVMVMADDEALKTNRLTLLNKLRNLFLDIADI 683 Query: 699 Q 699 Sbjct: 684 S 684 >gi|292490371|ref|YP_003525810.1| glycyl-tRNA synthetase subunit beta [Nitrosococcus halophilus Nc4] gi|291578966|gb|ADE13423.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus halophilus Nc4] Length = 691 Score = 771 bits (1992), Expect = 0.0, Method: Composition-based stats. Identities = 220/722 (30%), Positives = 350/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + K +E L+ L L+ G+ Y +++ Y P RL ++++ L+ Sbjct: 6 DLLIEIGTEELPPKALRKLSESLTQELSQRLQAAGLAYGSLKGYGAPRRLAVWVQELTAS 65 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++ ER GP + A A GF RS G+ ++ + KG + R+ Sbjct: 66 QPDRVLERRGPALTAAFDDEGRATAAAQGFARSCGVPVDELESLESE--KGAWLVHRQRR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L I+ ++Q +P PK MRW+ + +IRP+ ++ + ++ Sbjct: 124 QGAPTRELLPDILAQSLQALPIPKRMRWNDL-----SVEFIRPVHWLVLLF-----GDEA 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I +L + T GHRFH P P+ + Y LE E VL D RR AI Sbjct: 174 IPAELLGVQADRETRGHRFHHPAPLYLAEPAAYGPLLETEGKVLADFSVRREAIYAQVVE 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG E + + LL+E+ GLVEW G F+ +L LPEE++ T++ +QK F R Sbjct: 234 AAKKVGGEALVEDALLDEVTGLVEWPVALAGRFEPDFLQLPEEVLIATMQDHQKYFPVRD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI VSNI++ A+V+GN RV+ RL DA F+ D+ Sbjct: 294 GQGHLLPYFITVSNIESEQP-EAVVEGNERVIRPRLADAAFFYATDRK------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L R +L + F K+G+ ER R+ L + IA I + +RA Sbjct: 341 --------ESLASRCGKLK--KITFQEKLGSVFERTERLAQLARSIAISIGGNGDWAERA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPELQG +G+ YA+ +E +A+ E PR + +P Sbjct: 391 GLLSKCDLVTEMVTEFPELQGIMGRYYALRDDEPAEVAEALREQYLPRFAGDKLPGTPTG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE---------------N 519 +SLAD+LDTL+ + I E PSG +DPY LRRA LG++RII+E Sbjct: 451 QALSLADRLDTLVGLFGIGEPPSGDRDPYGLRRAALGVLRIIIEAELGLDLRLLLERGCQ 510 Query: 520 KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L++ + + +RL+ Y + R D IEA+L + +K + Sbjct: 511 AYGGRLTESNTAAQVHDYLLERLRGYYLEAGFRPDEIEAVLVLKPGRPWDFDRRLKGVAS 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL ++K I ++ P L AE+ L + D + Sbjct: 571 FRELPEAESLSAANKRIRNILRKSKEK---IPPQVEPGLLQDPAEQALATQMYDLEREVS 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + Y L S+ ++ FFD+V+V V+D +R NRL+LL+ ++ + L V ++ Sbjct: 628 PLLERQDYQAALRALASLRGAVDRFFDEVMVMVEDPALRANRLALLERLQTLFLQVADIS 687 Query: 700 KI 701 ++ Sbjct: 688 RL 689 >gi|149375623|ref|ZP_01893392.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter algicola DG893] gi|149360025|gb|EDM48480.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter algicola DG893] Length = 695 Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 199/724 (27%), Positives = 344/724 (47%), Gaps = 62/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + ++ + + L+E G+ + + + P RL + ++ Sbjct: 1 MATQDFLVELGTEELPPKALKPLSDAFTRGITHGLEEAGIQFGKVEAFAAPRRLAVRVRD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P+K E+ GP V G +A+ GF S G+ ++ D KG + Sbjct: 61 LEDAQPDKPVEKRGPAVKAAFDDSGNPTRALTGFATSLGVTPDQLDTLETD--KGAWVVY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R +++ +V ++ +P PK MRW + ++RP+ + + Sbjct: 119 RTIEKGRPTVELMPELVDQSLAALPIPKRMRWGAHRT-----EFVRPVHWAILLF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 K+ID + + GN T GHRFH P + V + Y L E V+ D RR I + Sbjct: 169 GNKVIDTPIMGLTPGNKTRGHRFHCPKSLIVPTPGDYEVVLRQEGYVIADFAERREQIRD 228 Query: 231 DAHRLAS-AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A G + V D+DLL+E+ L EW MG F++++L +P E + ++K +QK Sbjct: 229 GVTAIAKKEAGGQAVIDEDLLDEVTALNEWPVPLMGRFEERFLEVPAEALISSMKEHQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + +G + FI V+N+++ D ++ GN +V+ RL DA F+ D+ Sbjct: 289 FHVVSADGRMLPLFITVANLESKDP-QQVISGNEKVIRPRLSDAAFFYDTDRK------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L+ R+ +L +VF K+G+ ++ R+ L KKIA I +D Sbjct: 341 -------------TRLEDRIDQLKP--IVFQDKLGSIYDKSVRVAALAKKIADAIGSDPV 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L +RA +L+K DL TE+V EF +LQG +G+ YA EN A+ E PR +++P Sbjct: 386 LAERAAMLAKTDLVTEMVLEFTDLQGIMGQYYAANDGENEDVASALNEQYMPRFAGDDLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V++AD++D+L+ + IN+ PSG++DP+ LRRA+LG++RII+E ++ + L Sbjct: 446 ATLTGCAVAIADRIDSLVGLFGINQPPSGTRDPFGLRRASLGVLRIIIERELPLDLQTLC 505 Query: 530 E--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 E ++ + +R + + ++ I ++ A+ L +K Sbjct: 506 EWAVEQHNSFTEPKVANTVVDYMLERFRAHYEEQGISAEVYLAVHARRPTRPLDFDRRVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + KR+ IL + I I + L +AE L I Sbjct: 566 AVEAFRQLPEALALAGANKRVSNILTKQ--GGDSIGESIDSELLQDKAEITLADQIRQQA 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + Y L S+ EP++ FFD+V+V DD VR+NRL++L ++N+ L V Sbjct: 624 DKALPLFEKGDYATALSSLASLREPVDNFFDEVMVMADDEAVRNNRLAMLNLLRNLFLRV 683 Query: 696 INVQ 699 ++ Sbjct: 684 ADIS 687 >gi|83942787|ref|ZP_00955248.1| glycyl-tRNA synthetase, beta subunit [Sulfitobacter sp. EE-36] gi|83846880|gb|EAP84756.1| glycyl-tRNA synthetase, beta subunit [Sulfitobacter sp. EE-36] Length = 706 Score = 770 bits (1990), Expect = 0.0, Method: Composition-based stats. Identities = 277/729 (37%), Positives = 407/729 (55%), Gaps = 53/729 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L + G+ Y + + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLKKLVTNGLVDAGLTYASAAAFSTPRRLTLTVEGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A +KAI+GFLR GL + +D KG + A++ KP R Sbjct: 61 DASPSLVEERKGPKADAPEKAIEGFLRGAGLTRDQLEE--RDTPKGKILFAMINKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + + W+RPL SILCIL AED + + L + Sbjct: 119 AEIVAEVLETTIRNFPWPKSMRWGSG-----SLRWVRPLHSILCILSAED-GVQTVPLTI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP I V S D Y L+ V+LDP RR+ I NDA +A A G Sbjct: 173 DGITAGDTTRGHRFLAPDTITVSSFDDYSAKLKRVFVVLDPAERRDTIWNDATNMAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVE+ V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEYPVVLMGQIGDDFLGLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW+ D + + ++ Sbjct: 293 ERFVTVANRTTADDGATILAGNEKVLSARLSDAKFFWENDLRIAQSEAGMQ--------- 343 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + RL +V FH K+GTQ E +SR+ L ++A ++ AD A +KA Sbjct: 344 ------TWVDRLS--NVTFHNKLGTQAELISRMEALAGELAPMVGADAEEARAAARFAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G Y ++ + A ++H P GP ++VPT ++SI V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGSYYTKAAGKSEAIAAAAQDHYAPLGPSDDVPTARVSIAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------ 528 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + + L Sbjct: 456 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDVSMKLRDTILEHLSQAPAPA 515 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP----------ENDNLLTIVDL 573 +NL+ F HDRLK+YL D+ +RHD+I+A + ND+L +V Sbjct: 516 AGSAEETAENLLSFLHDRLKVYLKDQGVRHDIIDACISSSDGAPAGATDGNDDLTLLVKR 575 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVIS 632 K L+E + GE + KR IL+ E +R E S ++ + E+ L+A + Sbjct: 576 AKALSETLKTDDGENLIQGFKRANNILSQAEDADRVEYSFGADIKFAETDEERALFAALD 635 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 I+ +M+ + + + S+ PI+ FFD V VN D+ VR NRL+LL I+ I Sbjct: 636 TAEAQIKPAMEAQDFGTAMSAMASLRGPIDAFFDAVQVNADNATVRRNRLNLLSRIRTIC 695 Query: 693 LIVINVQKI 701 V ++ KI Sbjct: 696 SSVADLTKI 704 >gi|54307292|ref|YP_128312.1| glycyl-tRNA synthetase subunit beta [Photobacterium profundum SS9] gi|81828898|sp|Q6LW15|SYGB_PHOPR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|46911712|emb|CAG18510.1| Putative glycyl-tRNA synthetase, beta chain [Photobacterium profundum SS9] Length = 689 Score = 770 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 213/720 (29%), Positives = 338/720 (46%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE S LK +++Q + + TP RL L + L+ Sbjct: 5 NFLIELGTEELPPKALRTLAEAFSSNFEAELKTAALVHQGIEWFATPRRLALKVTALATG 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G KA G+ R G+ +K + KG+ L Sbjct: 65 QADSVVEKRGPAISAAFDAEGNPTKAAQGWARGNGITVEQADTLKTE--KGEWLLYKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L + A+ K+P PK MRW +IRP+K++ +L +++ Sbjct: 123 KGKPAQELLSGLAAAALAKLPIPKPMRWGNNE-----IQFIRPVKTLTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ I GHRF + + D Y LEE V+ + E R+ IL A + Sbjct: 173 IEGNILGADSARIIRGHRFMGEAEFTIDNADQYPAILEERGKVMANYEARKAIILEGAKK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG + +L+EE+ LVEW V SF++ +L +P E + T+K +QK F Sbjct: 233 AALEVGGIADLEDELVEEVTSLVEWPVVLTASFEENFLNVPTEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V+NI++ D I++GN +VV RL DA F+K D+ Sbjct: 293 AEGNLIPKFIFVTNIESKDPRQ-IIEGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV RA Sbjct: 340 --------RPLVDRLPELEKA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVTNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEDVALALYEQYMPRFAGDKLPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++ADK+DTL+ + I + P GS DP+ALRRA LG++RII+E + L I Sbjct: 450 AAVAMADKIDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKDYSLDLVDLIAKARA 508 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + D D+I A+L +K ++ Sbjct: 509 QFGDKLTNANVEDEVIDFMLGRFRAWYQDEGHSVDVILAVLALRPTQPADFDKRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S E + KR+ ILA K + E+ L + LL +AEK L + + Sbjct: 569 FRSLDAAESLAAANKRVGNILA---KFDGELPLAVDSSLLLEDAEKALAEKVEAMIATLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y Q L ++ EP++ FFD V+V DD +++ NRL++L ++N L V ++ Sbjct: 626 PVFAEGNYQQALSELATLREPVDAFFDNVMVMADDEKLKVNRLTMLNLLRNEFLKVADIS 685 >gi|170724382|ref|YP_001758408.1| glycyl-tRNA synthetase subunit beta [Shewanella woodyi ATCC 51908] gi|238688635|sp|B1KCY4|SYGB_SHEWM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169809729|gb|ACA84313.1| glycyl-tRNA synthetase, beta subunit [Shewanella woodyi ATCC 51908] Length = 689 Score = 770 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 217/720 (30%), Positives = 351/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L++ + +++ + + P RL + L Sbjct: 5 NLLIEVGTEELPPKALRKLAESFVSNFTDELEKAELSFESAQWHAAPRRLAFTVNQLVLA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAIAQAFDADGNPTKAAMGWARGNGISVEQAERLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW T+ + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLINDMAQRALDKLPIPKPMRWGTSKT-----QFIRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 ++ +L + + GHRF ++ D+Y+ L+E VL D E R+ I DA Sbjct: 173 VEGELLGVKSARVIRGHRFMGKKSFELDHADNYLSALKEQGMVLADYEARKAIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADLEDDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++ D I+ GN +VV RL DA F++ D+ Sbjct: 293 KAGQLLPHFIFVTNIESKDP-QVIISGNEKVVRPRLADAEFFFETDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+A L+ VVF ++GT +RV RI L IA IDAD RA Sbjct: 340 --------QTLESRLASLET--VVFQKQLGTIKQRVERISQLAGYIAASIDADSDEASRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALAEQYKPKFSGDTVPTAPIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 + V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L I Sbjct: 450 VCVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + FF R + + D+ + D+I A+L IK + Sbjct: 510 LHGDNLTNDKAAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFDSRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + KR+ ILA K E++ +IS + L+ AEK L +++ + Sbjct: 570 FRSLEQASALAAANKRVSNILA---KVEGELATDISSELLVENAEKALAEKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQQALSLLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 >gi|159044945|ref|YP_001533739.1| glycyl-tRNA synthetase subunit beta [Dinoroseobacter shibae DFL 12] gi|238686865|sp|A8LS45|SYGB_DINSH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157912705|gb|ABV94138.1| glycyl-tRNA synthetase beta chain [Dinoroseobacter shibae DFL 12] Length = 720 Score = 770 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 275/745 (36%), Positives = 400/745 (53%), Gaps = 71/745 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +AA+DL ++ L E G+ Y R Y TP RL L + + Sbjct: 1 MPELLIELFSEEIPARMQARAAQDLQKLVTNGLVEAGITYAGARAYATPRRLTLVVSDML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GP+ A +KAI+GFLRSTGL ++ KGDV AV+ KP R Sbjct: 61 AASAPVREERKGPKADAPEKAIEGFLRSTGLGREQLET--RETPKGDVLFAVIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + S+ W+RPL ILC+ + ++ +I+ L + Sbjct: 119 AEIVAEVLETTIRNFPWPKSMRWGS-----SSLRWVRPLHRILCL-IRDEEGAEIVPLTV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G++T GHRF AP IKV + Y L A V+LD E R I DA A A G Sbjct: 173 DGITAGDVTEGHRFLAPGEIKVHGFEDYETKLRRAKVILDAEERAEHIWADATNQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVE+ MG D +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDRRLLSEVAGLVEFPVPLMGEIDADFLDLPPEVLQTSMKEHQKFFSVRDLKSGKI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW+ D AL+ Sbjct: 293 VRFVTVANTETTDHGATILAGNRKVLSARLADAKFFWENDLRIARAGMQPWREALE---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+G+Q R++RI L +A + AD A L+KA Sbjct: 349 ---------------NVTFHNKLGSQAARIARIADLAATLAPQVGADPDAARTAAELAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA ++H +P GP + VPT +SI V+LA Sbjct: 394 DLSSEMVFEFPELQGLMGRYYAEAAGHPAEIAAVAQDHYQPLGPSDAVPTAPLSIAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL------ 534 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IRI+LEN + +PL ++ N Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRIVLENGLRLPLINSVKHHNSENTSRP 513 Query: 535 ------------------------------------ILFFHDRLKLYLHDRDIRHDLIEA 558 + FFHDRLK++L D IRHD+I+A Sbjct: 514 LFSALVAHAKTDQERADGSKSMSDWKALVARSQDDLLSFFHDRLKVFLRDEGIRHDIIDA 573 Query: 559 ILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISP 616 L ND+LL +V+ + L+E + GE L KR IL E+ + E S P Sbjct: 574 CLAMEGNDDLLLLVNRARALSETLKTEDGENLLQGFKRANNILTQAEEADGVEYSYGADP 633 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 ++ + E+ L+A + I +++ + + + S+ P++ FF+ V VN +++ Sbjct: 634 KFAETDEERALFAALDTAEAVIDPALEAEDFAAATAAMASLRAPLDAFFEAVQVNAENQI 693 Query: 677 VRDNRLSLLQYIKNIILIVINVQKI 701 +R NRL+LL I+ L + ++ +I Sbjct: 694 LRRNRLNLLSRIRATCLKLADLTRI 718 >gi|90413726|ref|ZP_01221714.1| glycyl-tRNA synthetase beta subunit [Photobacterium profundum 3TCK] gi|90325195|gb|EAS41692.1| glycyl-tRNA synthetase beta subunit [Photobacterium profundum 3TCK] Length = 689 Score = 769 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 213/720 (29%), Positives = 340/720 (47%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + AE S LK +++Q + + TP RL L + L+ Sbjct: 5 NFLIELGTEELPPKALRTLAEAFSSNFEAELKAAALVHQGIEWFATPRRLALKVTALATG 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G KA G+ R G+ +K + KG+ L Sbjct: 65 QADSVVEKRGPAISAAFDAEGNPTKAAQGWARGNGITVEQADTLKTE--KGEWLLYKQEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L + A+ K+P PK MRW +IRP+K++ +L +++ Sbjct: 123 KGKPAQELLSGLAAAALAKLPIPKPMRWGNNE-----IQFIRPVKTLTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I+ ++ I GHRF + + D Y LEE V+ + E R+ IL A + Sbjct: 173 IEGNILGADSARIIRGHRFMGEAEFTIDNADQYPAILEERGKVMANYEARKAIILEGAKK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A VG + +L+EE+ LVEW V SF++ +L +P E + T+K +QK F Sbjct: 233 AALEVGGIADLEDELVEEVTSLVEWPVVLTASFEENFLNVPSEALVYTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI V+NI++ D I++GN +VV RL DA F+K D+ Sbjct: 293 AEGNLIPKFIFVTNIESKDPRQ-IIEGNEKVVRPRLADAEFFFKTDRK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV RA Sbjct: 340 --------RPLVDRLPELETA--IFQKQLGTIKDKTDRITELAGYIAEKIDADVTNAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ +S Sbjct: 390 GLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEDVALALYEQYMPRFAGDELPSTGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++ADK+DTL+ + I + P GS DP+ALRRA LG++RII+E ++ L I Sbjct: 450 AAVAMADKIDTLVGIFGIGQAPKGS-DPFALRRAALGVLRIIVEKGYNLDLVDLIAKARA 508 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++I F R + + D D+I A+L +K ++ Sbjct: 509 QFGDKLTNTNVEDDVIDFMLGRFRAWYQDEGHSVDVILAVLALRPTQPADFDKRVKAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S E + KR+ ILA K + E+ L + L+ AEK L + + Sbjct: 569 FRSLDAAESLAAANKRVGNILA---KFDGELPLAVDSSLLIENAEKALAEKVEAMIAALA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y Q L ++ EP++ FFD V+V DD +++ NRL++L ++N L V ++ Sbjct: 626 PVFAEGNYQQALSELATLREPVDAFFDNVMVMADDEKLKVNRLTMLNLLRNEFLKVADIS 685 >gi|119471663|ref|ZP_01614048.1| glycyl-tRNA synthetase subunit beta [Alteromonadales bacterium TW-7] gi|119445442|gb|EAW26729.1| glycyl-tRNA synthetase subunit beta [Alteromonadales bacterium TW-7] Length = 689 Score = 768 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 212/719 (29%), Positives = 340/719 (47%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE + L L+ + +Q + Y +P RL L +K L Sbjct: 5 NLLVEIGTEELPPKSLRKLAEAFAANLTQELESLELAHQGVSWYASPRRLGLQVKALEAK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP G KA G+ R G++ ++ D KG L + + Sbjct: 65 QQDKEVEKRGPATKAAFDSEGNPTKAAMGWARGCGIEVSEAQTLETD--KGAWLLHIAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + ++ + A+ K+P PK MRW + +IRP+ ++ + +E + Sbjct: 123 AGQETKTLMADAIAKALSKLPIPKPMRWGANKT-----QFIRPVHTVTILFGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ ++ N GHRFH P I + D L+ A V+ D E R+ I Sbjct: 173 LEGEILGKQVSNQLQGHRFHHPEKISINHADEVFDVLKSAYVIADYEQRKAQIRAQIEEA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ASAV + D+DLLEE+ LVEW +F++ +L +P E + T+K +QK F + Sbjct: 233 ASAVNAVVAMDEDLLEEVTSLVEWPVTLTATFEEAFLDVPAEALIYTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F+ VSNI++ D + ++ GN +VV RL DA F++ D+ Sbjct: 293 NGKLLNKFLFVSNIESKDP-SVVISGNEKVVRPRLADAQFFFETDKK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ R+ LD V+F ++GT ++ RI L IA+ + AD L RA Sbjct: 339 -------KTLESRLESLDT--VLFQKQLGTLKDKSERISELAGYIAEQLGADKDLAKRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EF ++QG +G YA E A E PR +N+PTN IS Sbjct: 390 LLSKTDLMTEMVMEFTDVQGVMGMHYARFDGEAEDVALAQNEQYMPRFAGDNLPTNLISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 V++ADK DTL+ + I + P G KDP+ALRRA +G +RI++E ++ + + + + Sbjct: 450 AVAIADKFDTLVGIFGIGQAPKGDKDPFALRRAAIGALRIMVEKELPLDILDLVAKAQTL 509 Query: 536 ---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F R + + D I D+I+A+L + +K ++ F Sbjct: 510 FGEKLTNLNVSTDVFEFMLGRFRAWYQDEGIEVDVIQAVLARRPTKPVDFDRRVKAVSHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E + KR+ ILA K + + L +AEK L + ++ F T + Sbjct: 570 RTLDAAEALAAANKRVSNILA---KNDITSQGNVDESLLSDDAEKVLASQVAKFATELAP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L I E ++ FFD V+V DD V+ NRL+LL + + L + ++ Sbjct: 627 LYADGNYQEALSQLAGIRESVDNFFDNVMVMADDEAVKQNRLALLSQLSGLFLDIADIS 685 >gi|312115351|ref|YP_004012947.1| glycyl-tRNA synthetase subunit beta [Rhodomicrobium vannielii ATCC 17100] gi|311220480|gb|ADP71848.1| glycyl-tRNA synthetase, beta subunit [Rhodomicrobium vannielii ATCC 17100] Length = 721 Score = 768 bits (1984), Expect = 0.0, Method: Composition-based stats. Identities = 301/752 (40%), Positives = 419/752 (55%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LLE++SEEIPAR+Q + A+DL+ ++ L + G+ R P R+ + Sbjct: 1 MPNLLLELFSEEIPARLQGRGADDLAKLMTEALTKGGLTVGATRTLSGPRRIVFIADDVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HS +EER GPR A KA++GF+++ GL +I + Q+ KDP KGD YLA KP R Sbjct: 61 AHSAATVEERKGPRTSAPAKALEGFVKAAGLNSIDEAQVVKDP-KGDYYLARSEKPGRAA 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ VP I+K PWPKSMRW WIRPL SILC+ +K + ++ Sbjct: 120 ADIIAEAVPDIIRKFPWPKSMRWGNGR-----LRWIRPLHSILCLF-----DDKPVAFEV 169 Query: 181 KEIPCGNITYGHRFHA------PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I G+ITYGHRF + P +KV + Y L A V++ E R AIL AH Sbjct: 170 DGIKSGDITYGHRFLSGENITQPKVVKVDRISDYADALMHAKVVVAGEHRAKAILEGAHT 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS GL LVED LL E GLVEW V G F++ +L +PEE++ ++K +QKCF R+ Sbjct: 230 AASDAGLALVEDHGLLAENAGLVEWPVVLSGQFEESFLDVPEEILMTSMKAHQKCFSLRS 289 Query: 295 -REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G LAN FILVSN++A DGG AIV GN RV+ ARL DA FW+ D+ Sbjct: 290 AKTGKLANRFILVSNLEAEDGGKAIVAGNERVIRARLSDAKFFWENDRK----------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL+ A L V FH K+GTQ RV RI+ L +++A ++ AD R Sbjct: 339 ---------RPLEGLTALLG--QVTFHEKLGTQFRRVERIKALARELAPIVGADPDDAVR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL +E V EFPELQG IG A+ Q E + DAI EH KP+GP + VPTN + Sbjct: 388 AAHLAKADLMSETVGEFPELQGIIGSYIALAQGEKPAVADAIAEHYKPQGPSDAVPTNPV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 ++ V+LADKLD L+ FWAI+EKP+GSKDP+ALRRA LG+IRI+LEN + + L + IE Sbjct: 448 AVAVALADKLDMLVGFWAIDEKPTGSKDPFALRRAALGVIRIVLENGLRVELMKIIEKAS 507 Query: 531 ---------------------------------------DQNLILFFHDRLKLYLHDRDI 551 + ++ FF DRLK+YL D+ Sbjct: 508 ELIDEDQYERAMRRVEKSGGTVAFAKTSVEWNGRQIGTREAEMLSFFADRLKVYLRDQGA 567 Query: 552 RHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-RE 609 RHDLI+A+ P D+LL +V ++ L F + G+ L +R IL IEEKK+ R Sbjct: 568 RHDLIDAVFALPGQDDLLMVVRRVEALGRFLETDDGKSLLALVRRALNILRIEEKKDARA 627 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 E + + L + EK L + + G ++ ++ + + L + P++ FFD+V Sbjct: 628 FDGEPAAKLLKEKEEKALASAVKAVGKDVRAALATEDFEAAMTALAKLRAPVDAFFDKVT 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN D ++R+NRL+LL I+ + L + + KI Sbjct: 688 VNADAADIRENRLTLLAQIRALTLDIADFSKI 719 >gi|163751701|ref|ZP_02158920.1| glycyl-tRNA synthetase beta subunit [Shewanella benthica KT99] gi|161328440|gb|EDP99596.1| glycyl-tRNA synthetase beta subunit [Shewanella benthica KT99] Length = 689 Score = 767 bits (1981), Expect = 0.0, Method: Composition-based stats. Identities = 217/720 (30%), Positives = 349/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE LK+ + +++ + TP RL + + L Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLSNFTAELKKSELSFESAVWHATPRRLAICVNQLVLA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEEAGRLKTD--KGEWLLHQAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P+PK MRW + + +IRP+ ++ +L +E I Sbjct: 123 VGVETKSLISAMAQRALDKLPFPKPMRWGSNKT-----QFIRPVHTVTMLLGSE-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 + +L I + GHRF ++ D+Y+ L E+ VL D E R+ I DA Sbjct: 173 VAGELLGIKSDRVIRGHRFMGQASFELDHADNYLSALKEKGKVLADYEARKAIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + +LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKLGGIADLEDELLEEVCSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI + D I+ GN +VV RL DA F++ D+ Sbjct: 293 QTGQLLANFIFVTNIVSKDP-QVIISGNEKVVRPRLADAEFFFENDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+ L+ VVF ++GT +RV RI + IA IDA+ RA Sbjct: 340 --------QTLEDRLPSLE--SVVFQKQLGTIKQRVERISAMAGFIASSIDANAEEASRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A++E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVALALQEQYKPKFSGDTVPTAAIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 + V+LA+KLDTL+ + I P G+ DP+ALRRA +GI+RI +EN + + L I Sbjct: 450 VCVALAEKLDTLVGIFGIGLAPKGAADPFALRRAAIGILRICVENNLPLDLVDLIAKAQA 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + FF R + + D+ + D+I A+L + IK + Sbjct: 510 LHGSNLSNDTTAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARHPTSPADFDSRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K +I I L AEK L +++ + Sbjct: 570 FRTLEQALALAAANKRVSNILA---KVKGDIPASIDASLLTETAEKALAQKLNELQPKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL + E +++FF++V+V VDD +++NRL+LL ++ L V ++ Sbjct: 627 PLFASANYQEALALLADLRESVDVFFEEVMVMVDDEALKNNRLALLSSLREQFLHVADIS 686 >gi|90408448|ref|ZP_01216608.1| glycyl-tRNA synthetase beta subunit [Psychromonas sp. CNPT3] gi|90310432|gb|EAS38557.1| glycyl-tRNA synthetase beta subunit [Psychromonas sp. CNPT3] Length = 688 Score = 767 bits (1980), Expect = 0.0, Method: Composition-based stats. Identities = 216/724 (29%), Positives = 350/724 (48%), Gaps = 63/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+E+ +EE+P + K AE + + L + + ++ + +P RL + + Sbjct: 1 MSQENLLIELGTEELPPKSLRKLAEAFADNVRARLIDAELSFEKVDWLASPRRLAVVVTQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ +K+ E+ GP V G KA +G+ RS G+ ++ D KG+ L Sbjct: 61 LTDAQADKVVEKRGPAVSVAFAEDGTATKAAEGWARSNGISVEQAQRLVTD--KGEWLLF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L +IV A+ K+P PK MRW + S+ +IRP+ ++ + Sbjct: 119 KSEVKGKEVAQLLPSIVADALAKLPIPKPMRWGS-----SSIQFIRPVHTLCILF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +I +L + I GHRF ++ D Y LE V++D R+ I Sbjct: 169 GNTLIPAELLGVKSTRIIRGHRFMGESEFNIEHADDYAELLETRGKVIVDYVRRKAIIRT 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LASA D+ LLEE+ LVEW +GSF++KYL +P E + T+K NQK F Sbjct: 229 QVEVLASAENGVADIDEALLEEVTALVEWPVTLIGSFEEKYLAVPSEALIYTMKDNQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L FI VSNI+++D + +VQGN +VV RL DA F+ D+ Sbjct: 289 PVIDKKGNLLPRFIFVSNIESTDP-SQVVQGNEKVVRPRLADAEFFFATDKK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L R+ L V+F ++GT E+ +RI + +KIA LI+AD Sbjct: 340 ------------KTLASRVELLS--SVLFQKQLGTLKEKSARIANIAEKIALLINADAKH 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL TE+V EFP++QG +G YA E+ + A+ E PR + +PT Sbjct: 386 AQRAGWLSKADLMTEMVLEFPDVQGVMGMYYARFDGEDEAVAIALNEQYLPRFSGDKLPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + ++ VSLADKLDTL+ + I + P G+ DP+ALRRA +G++RII + ++D+ + E Sbjct: 446 SLVACAVSLADKLDTLVGIFGIGQAPKGAADPFALRRAAIGLLRIIKDKELDLDIVALAE 505 Query: 531 DQN---------------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 N ++ F R + +LI+++L + I+ Sbjct: 506 LANVEYGEKLSNKNVVTEVVDFLFARFRATYQANGFSAELIQSVLARRPTKPVDFEKRIQ 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + +F + + + KRI ILA K I+ EI + AE L +S Sbjct: 566 AVAKFHALPEAAPIAAANKRISNILA---KVKTPINAEIDADLFVEPAETALAQKLSTLE 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + Y L S+ P+++FF+ V+V D+ ++ NRL++L ++++ L V Sbjct: 623 LKLSPLFEKGDYESALFELASLQAPVDLFFENVMVMADNDAIKQNRLAILSRLRDLFLKV 682 Query: 696 INVQ 699 +V Sbjct: 683 ADVS 686 >gi|300024367|ref|YP_003756978.1| glycyl-tRNA synthetase subunit beta [Hyphomicrobium denitrificans ATCC 51888] gi|299526188|gb|ADJ24657.1| glycyl-tRNA synthetase, beta subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 693 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 286/711 (40%), Positives = 396/711 (55%), Gaps = 54/711 (7%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +A++DL +++ LK G+ R + TP RL L ++G+ SP EE+ G Sbjct: 13 IPARMQARASDDLKRLIVDGLKARGLDVGEARSFATPRRLTLVIEGVPAKSPAISEEKKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PRVGA +A+ GFL+S GL ++ D + KD KKGD Y+A + KP R +++ + Sbjct: 73 PRVGAPDQAVQGFLKSAGLASLEDATVVKDEKKGDFYVAKIEKPGRAAAEIIAETIVEVA 132 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K PWPKSMRW + S+F W+RPL+S+LC+L K++ +L I GN T GH Sbjct: 133 AKFPWPKSMRWGS-----SSFQWVRPLQSVLCLLDG-----KVVPFELNGIEAGNETRGH 182 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 RF P P KV++ Y L V+LDP R AI AH LA LEL+ED LL E Sbjct: 183 RFLGPGPFKVKNFADYEAKLAAHHVMLDPAKRAAAISEQAHALAKDAKLELIEDDALLAE 242 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-TREGVLANCFILVSNIQA 311 GL EW V MG+FDK +L +P E++ ++KT+QKCF R TR LAN F+LVSN+ A Sbjct: 243 NAGLTEWPVVLMGTFDKAFLEVPAEVLTTSMKTHQKCFSLRETRSKKLANKFLLVSNLVA 302 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 DGGA IV GN +V+ ARL DA FW++D L PL + + Sbjct: 303 KDGGAEIVSGNEKVIRARLSDAKFFWEQD--------------------LKHPLGEMAGK 342 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFP 431 L + FH K+G+Q +RV RI L ++A DA RA L+KADL + +V EFP Sbjct: 343 LS--GITFHEKLGSQKDRVERIEALAFELAGACDAIPEDARRAAGLAKADLVSGMVGEFP 400 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS----ITVSLADKLDTLI 487 ELQG +G+ YA A+E H KP+GP + VP + V+LADKLDTL+ Sbjct: 401 ELQGLMGRYYAEHVGTKPEIARALELHYKPKGPTDTVPREDQGDAVAVAVALADKLDTLV 460 Query: 488 NFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL----------- 536 FWAI EKP+GS DPY LRRA LG+IRI+LEN + +PL+ +IE + Sbjct: 461 GFWAIGEKPTGSGDPYQLRRAALGVIRIVLENDLRVPLNHYIEIGERLHGAKKAAGEVQS 520 Query: 537 ----FFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 FF DRLK++L D+ RHDLI+A+ D+L IV ++ L+ F + G L Sbjct: 521 DLLSFFADRLKVFLRDQGKRHDLIDAVFALGGQDDLALIVRRVEALDAFLKTDDGANLLA 580 Query: 592 SAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR ILAIEEKK+ + + + + + E L A I +++ + + Sbjct: 581 GVKRAANILAIEEKKDKKSYAGPYDLKLITEKEETALAAAIEATKQDTVAAINVENFAGA 640 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + P++ FF+++LVN DD ++R+NRL LL I+ V + KI Sbjct: 641 MRALSELRAPVDAFFEKILVNADDPKIRENRLRLLSEIRAATQTVADFSKI 691 >gi|127510944|ref|YP_001092141.1| glycyl-tRNA synthetase subunit beta [Shewanella loihica PV-4] gi|166227926|sp|A3Q8T4|SYGB_SHELP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|126636239|gb|ABO21882.1| Glycine--tRNA ligase [Shewanella loihica PV-4] Length = 689 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 219/720 (30%), Positives = 351/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + AE L++ + Y++ Y P RL L + L Sbjct: 5 NLLIEVGTEELPPKSLRTLAESFLANFEEELQKAELSYESATWYAAPRRLALKVNALVTA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++ D KG+ L + Sbjct: 65 QADKVVEKRGPAIAQAFDADGNPTKAAMGWARGNGITVEQAERLTTD--KGEWLLHKAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + + +IRP+ ++ ++ +++ Sbjct: 123 VGVETKSLVAEMAQRALDKLPIPKPMRWGSNKT-----QFIRPVHTVTMLM-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I +L I GHRF +++ D+Y+ LE + V+ D + R I DA Sbjct: 173 IPGELLGIESARTIRGHRFMGVDTLELDHADNYLTALETQGKVMADYQARMAIIKADAQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G D+DLLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 233 AADAMGGIAEIDEDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI VSNI++ D A I+ GN +VV RL DA F++ D+ + Sbjct: 293 KAGTLLPHFIFVSNIESKDP-AQIIAGNEKVVRPRLADAEFFFETDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+A L+ VVF ++GT +RV RI L IAQ I AD RA Sbjct: 341 ---------SLESRLASLET--VVFQQQLGTIKDRVERISALAAFIAQGIGADSEQAGRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+EE KP+ ++VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLDGETEAVALALEEQYKPKFSGDSVPTQPIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 I+V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RI +EN + + L + Sbjct: 450 ISVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRICVENNLPLDLVDLVAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L + IK + Sbjct: 510 LHGANLSNADTAEQVLEFLMGRFRAWYQDQGISVDVILAVLARRPTSPADFDSRIKAVTH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + KR+ ILA K +I+ +I L AE+ L + +++ ++ Sbjct: 570 FRSLEQAAALAAANKRVSNILA---KVEGDIASDIDSNLLQESAEQALASKLNELQPQLE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL S+ E ++ FF+ V+V DD ++ NRL+LL ++ L ++ Sbjct: 627 PLFANADYQQALALLASLRESVDTFFEDVMVMADDEALKQNRLALLSKLRAQFLHAADIS 686 >gi|114319177|ref|YP_740860.1| glycine--tRNA ligase [Alkalilimnicola ehrlichii MLHE-1] gi|114225571|gb|ABI55370.1| glycyl-tRNA synthetase beta chain [Alkalilimnicola ehrlichii MLHE-1] Length = 693 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 219/728 (30%), Positives = 352/728 (48%), Gaps = 65/728 (8%) Query: 1 MPD----FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYL 56 M + L+EI +EE+P + ++ L++ + + + Y TP RL L + Sbjct: 1 MAESTRTLLIEIGTEELPPVALPRLEAAFRDGVVQGLEQAELGHGPVHSYATPRRLALQV 60 Query: 57 KGLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 + L +K ER GP + G KA +GF RS G +++ KG Sbjct: 61 EALQARQEDKAIERRGPALNVAFDDHGRPTKAAEGFARSCGATVEQLERLET--PKGTWL 118 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 +P R ++L IV ++ ++P PK MRW + + +++RP+ I+ +L A+ Sbjct: 119 AWRGVQPGRAATELLPDIVNQSLSRLPIPKRMRWGSGQA-----TFVRPVHWIVFLLGAD 173 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAI 228 ++ L ++ G T GHRFHAP PI++ S D Y L E V E RR I Sbjct: 174 -----VVPATLMDVTSGRTTRGHRFHAPEPIELASADDYAERLRGEGRVEASFEARRERI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 RLA + D+ LL+E+ LVEW +GSFD +L +PEE + +++ +QK Sbjct: 229 RRGVLRLAEQEQGVAIMDEGLLDEVTALVEWPVPLVGSFDPGFLEVPEEALISSMQGHQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F R ++G L FI V+NI++ D + GN RV+ RL DA FW++D+ Sbjct: 289 YFPVRGQDGQLLPLFITVANIESRDP-DQVRSGNERVIRPRLADADFFWQQDRK------ 341 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 +PL R+A L V+F ++GT ++ R+ L +++A +D D Sbjct: 342 --------------RPLIDRLADLK--GVIFQKQLGTLYDKTQRVAHLAEQLAVEMDHDP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A V RA L++ DL TE+V EFPELQG +G+ YA+ E + DAI EH +PR E + Sbjct: 386 APVARAAWLARCDLGTEMVGEFPELQGIMGRYYALHDGEPKAVADAILEHYRPRYAGEAI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P +++A++ DTL +AI P+G KDP+ALRRA LG++R ++E ++ + L Sbjct: 446 PATPAGRLLAIAERADTLAGIFAIGLAPTGDKDPFALRRAALGLMRTLIEGELPLDLEGL 505 Query: 529 IEDQNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++L F +RL+ Y ++ I +L EA+L L Sbjct: 506 LGRAAVLLPEGIAGRSIAEEVYDFCLERLRGYYQEQGIGAELFEAVLAVRPRCPLDFHRR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + F + E + KRI IL K + ++ L AE+ L + Sbjct: 566 LLACRRFAGLPEAEALAAANKRIGNILR---KAGETVPDTVASAQLKEPAEQALARSLEA 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q + Y + L + EP++ FFD +LV +D VR NRL+LL+ I+ + L Sbjct: 623 TREQLQPRLAEGDYAGALEGLARLREPVDTFFDDILVMAEDPGVRVNRLALLKAIQALFL 682 Query: 694 IVINVQKI 701 + +V ++ Sbjct: 683 EIADVSRL 690 >gi|302391468|ref|YP_003827288.1| glycyl-tRNA synthetase beta chain [Acetohalobium arabaticum DSM 5501] gi|302203545|gb|ADL12223.1| glycyl-tRNA synthetase beta chain [Acetohalobium arabaticum DSM 5501] Length = 694 Score = 765 bits (1977), Expect = 0.0, Method: Composition-based stats. Identities = 221/733 (30%), Positives = 364/733 (49%), Gaps = 72/733 (9%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + LLEI +EEIPA E L + L K+ + ++ Y TP RL L + Sbjct: 1 MSNNKLLLEIGTEEIPAGFMEPTFEQLEELAAELFKQYRIETGSVATYGTPRRLTLVVNE 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 +S + +E GP G KA GF R GL T+ + +I+ D G+ A Sbjct: 61 VSSRQDDLTKEVKGPAKNIAFDDEGNPTKAGSGFARGQGL-TVDELEIR-DTDNGEYLFA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V + + E++L I+ I + + KSMRW+ ++RP+ IL + Sbjct: 119 VQTEEGKPTEELLPEILTELIHDLDFAKSMRWADKD-----MQFVRPIHWILALY----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ ++L++ +I T GHRF + I++ S Y L E V++D RR I++ Sbjct: 169 GDEPVELEVADIESDTYTKGHRFLSTGQIEIDSAQDYFDRLNEEYVIVDQNKRREMIIDQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L G E++ D+DLL+E+ LVE+ MGSFD+++L LP E++ +++ +Q+ F Sbjct: 229 ITELGKEAGGEVLIDEDLLKEVNYLVEYPTALMGSFDEEFLDLPREVLITSMREHQRYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V N + D + +GN +V+ ARL D + F++ DQ Sbjct: 289 IEDDNGDLMARFITVRNG-SEDHIDIVREGNEKVLRARLADGMFFYEEDQKED------- 340 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L+ ++ L +V+F +GT E+V R+ L K A+ +D +V Sbjct: 341 -------------LEDKVDELK--NVIFQEDLGTIYEKVKRLVELSKVFAKKLDLSEKEV 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA LSKADL TE+V EFP+L+G +G+EYA L EN + DAI EH PR + + Sbjct: 386 KDSKRAAYLSKADLITEMVIEFPKLEGVMGREYAKLSGENKAVADAIFEHYLPRYATDVL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P K VS+ADK+D ++ + + P+GS+DPYALRR GI++IIL++ + + L+ Sbjct: 446 PQTKTGQIVSIADKIDNIVGCFGVGLIPTGSQDPYALRRQAQGIVKIILDSDLKLNLAGL 505 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I++ ++ FF RL+ +R +R+D+ A+L + +L Sbjct: 506 IDNVLELLVEAEKLKRSQGEVKTEVLDFFKQRLEHIFEERGVRYDVSNAVLATDITDLND 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 V + + EF + K E L + R + ++ S +I+P E+E++LY Sbjct: 566 AVKRAEAVMEFRNEEKFEDLLTAYNRAGNL------ADKATSEDINPDLFTDESEEKLYE 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++E + K Y D L ++ +P++ FF+ V+V DD +V++NRL+LL+ Sbjct: 620 AYQSTQAEVEELLVAKDYSSALDELATLQKPVDKFFNSVMVMADDEKVKNNRLALLKNTV 679 Query: 690 NIILIVINVQKIV 702 I + ++ +IV Sbjct: 680 QIFTKIADLSEIV 692 >gi|126461281|ref|YP_001042395.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides ATCC 17029] gi|229558571|sp|A3PH07|SYGB_RHOS1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|126102945|gb|ABN75623.1| Glycine--tRNA ligase [Rhodobacter sphaeroides ATCC 17029] Length = 697 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 269/721 (37%), Positives = 397/721 (55%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + ++D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDRLETRED-KKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL+SILC+L +++ +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWGTG-----SLRWVRPLQSILCLL-SDEGGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V + Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFEDYRAKLGRAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D G I++GN +V++ARL DA FW+ D + Sbjct: 293 EKFVTVANRETADHGETILKGNGKVLSARLSDARFFWENDLRTVKTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ L V FH ++G+Q +R++RI L ++IA L+ A L A ++KA Sbjct: 341 ----LEGMAEGLK--QVTFHNRLGSQADRIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S+ V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGSYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI-----------------DI 523 DK+DTL FW I EKP+GSKDP+ALRRA LG+IR++L N Sbjct: 455 DKIDTLAGFWRIGEKPTGSKDPFALRRAALGVIRLLLTNNSRAGLMGIMLPAMNRHLEPF 514 Query: 524 PLSQFIEDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 S F + +L FFHDRLK++L ++ IRHD+I+A L P ND+L +V + L+ F Sbjct: 515 DTSDFTPYERELLSFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSAFL 574 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G L KR IL E K+ E S P++ +AE+ L+A + I Sbjct: 575 KTDDGTNLLQGFKRANNILTQAEAKDGVEYSFGADPKFAETDAERALFAALETAEAAIGP 634 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + + ++ PI+ FF+ V VN D+ +R NRL++L I+ V ++ + Sbjct: 635 ALQAEDFAAAMSAMAALRAPIDAFFETVQVNADNAVLRRNRLNMLHSIRATCARVADLTR 694 Query: 701 I 701 I Sbjct: 695 I 695 >gi|237806784|ref|YP_002891224.1| glycyl-tRNA synthetase, beta subunit [Tolumonas auensis DSM 9187] gi|259511933|sp|C4L762|SYGB_TOLAT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|237499045|gb|ACQ91638.1| glycyl-tRNA synthetase, beta subunit [Tolumonas auensis DSM 9187] Length = 690 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 203/720 (28%), Positives = 333/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+E+ +EE+P + K A+ + L + G+ +Q ++ + P RL L + L+ Sbjct: 5 NFLIELGTEELPPKALRKLAQAFADNFTAELDKAGLAHQGVQWFAAPRRLALKVAALADK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP V G A G+ +S G++ ++ D KG+ + Sbjct: 65 QADKQVEKRGPAVSAAFDAAGNPTPAAAGWAKSNGIEVAQADRLATD--KGEWLVYRANV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L + A+ +P PK MRW + +IRP+ ++ + AE + Sbjct: 123 AGQPTTGLLPAMAATALAGLPIPKPMRWGAKRT-----QFIRPVHTLCMLFGAE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 +D ++ + I GHRF ++ D Y L E+ V D E R+ I A Sbjct: 173 VDGEILGLRSARIIRGHRFMGEAQFEISHADQYPALLLEKGKVQADYETRKAFIKAGAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G ++ LLEE+ LVEW + +F++K+L +P E + T+K +QK F Sbjct: 233 AAQQLGGIADIEESLLEEVTSLVEWPVILTATFEEKFLAVPAEALVHTMKGDQKYFPVYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI VSNI++ D A I+QGN RVV RL DA F+ D+ + Sbjct: 293 NNGKLLPNFIFVSNIESKDP-AQIIQGNERVVRPRLSDAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L R+ LD V+F ++GT ++ RI + IA I ADV RA Sbjct: 341 ---------SLASRLESLDT--VLFQQQLGTLKDKSVRIAEMSAFIAAQIGADVEHATRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA +E A+ E PR +N+P ++ Sbjct: 390 GLLSKCDLMTNMVMEFTDTQGVMGMHYARHDHEAEDVAVALNEQYMPRFAGDNLPNGLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++ADKLDTL + I + P G KDP+ALRRA +G +RII+E ++D+ L + Sbjct: 450 CAVAIADKLDTLAGIFGIGQAPKGDKDPFALRRAAIGTLRIIVEKQLDLDLVDVVSKAAE 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + I D+I+A+L +K ++ Sbjct: 510 LYDGKISNKSVVDEVVDFMLGRFRASYQEAGIAVDVIQAVLARRPTRPADFDARVKAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ ILA K + ++ + L AE+ L ++ T + Sbjct: 570 FRTLDAAEALAAANKRVSNILA---KFDGKLKDSVDAALLQDPAEQVLAQQVAAMETKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y L ++ E ++ FFD+V+V DD ++ NRL+LL ++ + L ++ Sbjct: 627 PLFANGEYQLALTELAALREAVDTFFDKVMVMADDEALKLNRLTLLARLQALFLQAADIS 686 >gi|119947319|ref|YP_944999.1| glycyl-tRNA synthetase, beta subunit [Psychromonas ingrahamii 37] gi|166227922|sp|A1T0Y5|SYGB_PSYIN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119865923|gb|ABM05400.1| glycyl-tRNA synthetase, beta subunit [Psychromonas ingrahamii 37] Length = 688 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 210/720 (29%), Positives = 349/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + + AE + + L + + + ++R +P RL L + LS Sbjct: 5 NLLIELGTEELPPKSLRQLAESFASNVEAELNKAELSFDSVRWLASPRRLALVIANLSDS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 65 QADKIVEKRGPAVNVAFDAEGQATKAAQGWARSNGITVEQAERLITD--KGEWLLFKSEV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ I A+ K+P K MRW + S+ +IRP+ ++ + + ++ Sbjct: 123 KGLSVAELIPEIAANALAKLPISKPMRWGS-----SSTQFIRPVHTVTMLFGS-----RL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I +L + I GHRF + + D Y L++ V++D E R+ I + Sbjct: 173 IQGELLGVASDRIIRGHRFLGEAELIIDHADQYETLLDDSGKVIVDYERRKAIIRDQVEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ D+ LLEE+ LVEW +GSF+ K+L +P E + T+K NQK F Sbjct: 233 LAAHENGVADIDESLLEEVTSLVEWPVTLVGSFEDKFLDVPSEALIYTMKDNQKYFPVLD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI + D A ++ GN +V+ RL DA F++ D+ Sbjct: 293 KDGKLLPRFIFVSNIVSRDP-AQVISGNEKVIRPRLADAEFFFETDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L R+ L V+F K+GT E+ RI + + IA I AD RA Sbjct: 340 --------KTLASRLESLS--SVLFQQKLGTLKEKSERIANVAEDIALQIKADTKHAQRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T++V EFP++QG +G YA+ E A+ E PR + +PT+ ++ Sbjct: 390 GLLSKTDLMTDMVMEFPDVQGIMGMHYALHDGEEQEVAIALNEQYLPRFAGDKLPTSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 VSLADKLDTL+ + I + P G+ DP+ALRRA +G++RII +D+ L + +E Sbjct: 450 CAVSLADKLDTLVGIFGIGQAPKGAADPFALRRAAIGLLRIITNKNLDLDLVELVEIAKL 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 Q+++ F R + +LI+++L + ++ + + Sbjct: 510 QYGHKLTNDNVVQDVVDFLFARFRATYQANGYSVELIQSVLVRRPTKPVDFEKRLQAVAK 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KRI ILA K EI+ ++ P L AE +L ++ + ++ Sbjct: 570 FQTLPEAAPIAAANKRISNILA---KVKGEINAQVDPSLLQEPAEIKLSEILGSLESTLR 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D+ Y L S+ EP++ FFD V+V +D ++ NRL++L ++N+ L + +V Sbjct: 627 PLFDNLDYESALFELASLNEPVDEFFDNVMVMAEDPAIKANRLAILNRLRNLFLQIADVS 686 >gi|77163904|ref|YP_342429.1| glycine--tRNA ligase [Nitrosococcus oceani ATCC 19707] gi|254435742|ref|ZP_05049249.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus oceani AFC27] gi|76882218|gb|ABA56899.1| glycyl-tRNA synthetase beta chain [Nitrosococcus oceani ATCC 19707] gi|207088853|gb|EDZ66125.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus oceani AFC27] Length = 691 Score = 765 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 221/722 (30%), Positives = 347/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + K +E L L L+ G+IY +++ Y P RL ++++ L+ Sbjct: 6 DLLIEIGTEELPPKALRKLSESLLQELSHGLQAAGLIYGDLKGYGAPRRLAVWVQALTVS 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 PE++ ER GP + G A GF S G+ + +K + KG + R+ Sbjct: 66 QPEQVLERRGPALAAAFNEEGKPTAAARGFAGSCGVPVEALESLKNE--KGAWLVYRQRQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L I+ A+Q +P PK MRWS +IRP+ ++ + E++ Sbjct: 124 QGAPTRELLPAILAQALQALPIPKPMRWSDLPG-----EFIRPVHWLVLLF-----GEEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I L + G T GHRFH P P+ + Y LE E VL D RR AI Sbjct: 174 IPATLLGVQAGRETQGHRFHHPEPLYLTEPAAYATLLETEGKVLADFAVRREAIYTQVVA 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + ++ LL+E+ GLVEW G FD +L LP E++ T++ +QK F + Sbjct: 234 AAQQMGGKALIEEALLDEVTGLVEWPVALAGQFDGDFLKLPAEVLIATMQDHQKYFPVQD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L CFI V NI++ +V+GN RV+ RL DA F+ D+ Sbjct: 294 EQGHLLPCFITVCNIESQRP-EVVVEGNERVIRPRLTDAAFFYATDRK------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L R RL + F K+G+ ER R+ L IA+ I + RA Sbjct: 341 --------ESLASRCERLK--KITFQEKLGSVFERTERLAKLAWHIAKDIGGNGDWAKRA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPELQG +G+ YA+ +E +A+ E PR + +P Sbjct: 391 GLLSKCDLVTEMVTEFPELQGSMGRYYALHDHEPQEVAEALREQYLPRFAGDVLPRTATG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +SLAD+LDTL+ + I PSG KDPY LRRA LG++RII+E+ + + L ++ Sbjct: 451 QALSLADRLDTLVGLFGIGAPPSGDKDPYGLRRAALGVLRIIIESGLALDLPSLLKRACE 510 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + +RL+ Y + R D IEA+L D L +K + Sbjct: 511 TYNDRLTEKNTAVQVHAYLLERLRGYYLEAGFRPDEIEAVLAVRPDQPLDFDRRLKAVAS 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL K ++ +I L AE+ L + + Sbjct: 571 FRKLPEAESLSAANKRIRNILR---KSGEKLPAQIESDLLQDPAEQTLATQMYSLEREMM 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L + ++ FFD+V+V V+D ++R NRL+LL ++ + L V ++ Sbjct: 628 PLLERQDHRATLTALAGLRGAVDQFFDEVMVMVEDPKLRANRLALLARLQTLFLQVADIS 687 Query: 700 KI 701 ++ Sbjct: 688 RL 689 >gi|157959836|ref|YP_001499870.1| glycyl-tRNA synthetase subunit beta [Shewanella pealeana ATCC 700345] gi|189082275|sp|A8GYE8|SYGB_SHEPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157844836|gb|ABV85335.1| glycyl-tRNA synthetase, beta subunit [Shewanella pealeana ATCC 700345] Length = 689 Score = 765 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 219/720 (30%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE L + + +++ + P RL + + L+ Sbjct: 5 NLLIEIGTEELPPKSLRKLAESFLANFTEELTKAELSFESAVWHAAPRRLAICINQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L R Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEQAERLKTD--KGEWLLHQARV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIADMAQRSLDKLPIPKPMRWGSNTT-----QFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 +D +L I I GHRF K+ D+Y+ L E+ VL D E R+ I DA Sbjct: 173 VDGELLGIKSDRIIRGHRFMGESSFKLDHADNYLVALKEKGKVLADYEARKAIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADLEDDLLEEVTSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F++ D+ + Sbjct: 293 NAGQLLPNFIFVTNIESKDP-QQIIAGNEKVVRPRLADAEFFFETDKKD----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ VVF ++GT +RV RI + IA IDA+ RA Sbjct: 341 ---------TLEARLTSLET--VVFQKQLGTIKQRVERISAMAGYIATSIDANSEEAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALSEQYKPKFSGDTVPTAPIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L I Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + FF R + + D+ + D+I A+L IK + Sbjct: 510 LHGENLTNADVAEQVLEFFMARFRAWYQDQGVSVDVILAVLARRPTAPADFESRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K E+ I + L+ AEK L +++ + Sbjct: 570 FRTLEQASALAAANKRVSNILA---KVEGELPAAIDDKLLVEAAEKALAEKLAELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQEALALLASLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 >gi|254474910|ref|ZP_05088296.1| glycyl-tRNA synthetase, beta subunit [Ruegeria sp. R11] gi|214029153|gb|EEB69988.1| glycyl-tRNA synthetase, beta subunit [Ruegeria sp. R11] Length = 743 Score = 764 bits (1974), Expect = 0.0, Method: Composition-based stats. Identities = 278/766 (36%), Positives = 402/766 (52%), Gaps = 90/766 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L L+G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRVTDGLVEAGLTYAGAHALSTPRRLTLALEGVL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA KAI+GFLR GL + +D KG VY A + K R Sbjct: 61 DHSPTVREERKGPKVGAPDKAIEGFLRGAGLTRDQLEE--RDTPKGAVYFATIEKAGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW + W+RPL SILCIL AED +++ LD+ Sbjct: 119 ADIIAEVLEDTIRNFPWPKSMRWGAG-----SLRWVRPLHSILCILSAED-GAEVVALDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V S + Y L+ A V+LDP R AI DA A A G Sbjct: 173 DGITSGNTTRGHRFMAPDEITVSSFEDYATKLKRAYVVLDPAEREAAIWQDATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V +GS D ++L LP E+++ ++K +QK F + + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLLGSIDDEFLELPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW+ D + + + Sbjct: 293 EKFVTVANRETADNGATILAGNQKVLSARLADAKFFWENDLRTAKSEAGMSAWVD----- 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++ +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 348 ------------NLSNVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + +A E+H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPSAVANACEQHYSPLGPSDDVPTESVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------------- 527 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + + L Sbjct: 456 DKMDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLNNDVRVRLDSVIDAHLLRHEMAQ 515 Query: 528 --------------FIEDQNLILF-----------------FHDRLKLYLHD-----RDI 551 E + +F ++LK L D Sbjct: 516 NGDDPVATRLMQDMLTEIADHGVFGSAVRTVLDAFDGDLPKHIEQLKEQLPDVSRDLLSF 575 Query: 552 RHDLIEAILRPE---------------NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 HD ++ LR + ND+L +V + L +F S G L KR Sbjct: 576 FHDRLKVFLRDQGIRHDVIDACIAMDGNDDLTLLVKRARALEDFLKSEDGTNLLQGFKRA 635 Query: 597 FQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL E+K+ E S ++ + EK L+ ++ I +++ + + + Sbjct: 636 NNILTQAEEKDGVEYSYGADKKFAEDDTEKALFDALATSEGAISSAIEAEDFAAAMGSMA 695 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ P++ FF+ V VN D+ VR NRL+LL I+ ++ V ++ +I Sbjct: 696 ALRAPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVVGQVADLTRI 741 >gi|295689050|ref|YP_003592743.1| glycyl-tRNA synthetase subunit beta [Caulobacter segnis ATCC 21756] gi|295430953|gb|ADG10125.1| glycyl-tRNA synthetase, beta subunit [Caulobacter segnis ATCC 21756] Length = 664 Score = 764 bits (1974), Expect = 0.0, Method: Composition-based stats. Identities = 276/704 (39%), Positives = 393/704 (55%), Gaps = 43/704 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++SEEIPARMQ +AA+DL + L G + + + + P RL L +GL Sbjct: 1 MPQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALTTFAGPRRLTLVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GPRVGA +A++GFLR TGL D +++D VY+A + K R Sbjct: 61 LAQADRKEELKGPRVGAPPQAMEGFLRKTGLT--QDQLVERDG----VYMAFIEKKGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ PWPKSM W W+RPLK ILC+L E ++ + Sbjct: 115 AEIVAEMVEAIVRGFPWPKSMIWGYKK-----LRWVRPLKRILCVLDRE-----VVPFSI 164 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I G++T GHRF P + D Y LE+ V+LD E R+ IL L A Sbjct: 165 EGIESGDVTEGHRFMGEAKPFVAKDFDEYAAGLEKHFVVLDVEERKQRILEGCKTLCFAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 LELVED+ LL+E+ GL EW +G D +L LP E+IR +++T+QK F + E Sbjct: 225 HLELVEDQGLLDEVAGLAEWPTPVLGDMDPSFLDLPPEVIRTSMRTHQKYFAVKKPGEPG 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI ++NIQA DGGA I GN++V++ARL DA FW D+ Sbjct: 285 LAPHFITIANIQAKDGGAVIAAGNAKVLSARLSDARFFWDEDRKAG-------------- 330 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + + +L+ V FHAK+GT +RV RI L IA L+ ADVA A L+ Sbjct: 331 ------FEPWLEKLN--GVTFHAKLGTMAQRVERIVALAGAIAPLVGADVAKAKEAARLA 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA + AI++H KP+GP + VPT+ ++I V+ Sbjct: 383 KADLASGMVGEFPELQGLMGGYYAREAGLDPEIAAAIQDHYKPQGPSDAVPTSPLAIAVA 442 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDTL+ F+AI+EKP+GSKDPYALRRA LG+IRI+LEN + + L++F +D +LI FF Sbjct: 443 LADKLDTLVGFFAIDEKPTGSKDPYALRRAALGVIRIVLENGLRVSLAKFGKD-DLIAFF 501 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DRLK+ L D+ RHDL++A+ +D+L IV ++ L+ F + G+ L KR Sbjct: 502 ADRLKVTLRDQGKRHDLVDAVFALGDDDLARIVARVEALDGFLKTDDGKNLLAGYKRASN 561 Query: 599 ILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 IL EEKK S E AE +LY + + +++ + + L + Sbjct: 562 ILKAEEKKGALPSGEPEAPAADSAAEVQLYDALRVLKGPLADALAKEDFTGAMAQLAGLR 621 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 P++ + D V VN D E RDNRL L +++ + V + I Sbjct: 622 GPVDAYLDGVFVN--DPEHRDNRLKTLAAVRDAMGQVADFGLIA 663 >gi|148545333|ref|YP_001265435.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida F1] gi|166227920|sp|A5VWJ1|SYGB_PSEP1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148509391|gb|ABQ76251.1| Glycine--tRNA ligase [Pseudomonas putida F1] Length = 684 Score = 764 bits (1974), Expect = 0.0, Method: Composition-based stats. Identities = 210/723 (29%), Positives = 344/723 (47%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + E + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALTSLGEAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP + G +A GF + G+ ++ + + G Sbjct: 61 LDVQQPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGV------ELAEIDQSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + D+L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 SQHIPGKATTDLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 GDQVVDCTILSQKAGRESRGHRFHHPETVVITTPANYVEDLRKAHVLADFAERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LLDSEGKLLPRFITVANIESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L +A LI D Sbjct: 335 -----------QPLETFNERLK--NVVFQAQLGTVYDKAERVSKLAAFVAPLIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 GRAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEF 501 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D I ++ + + L ++ Sbjct: 502 AVKQFGAKVKAPGLADQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 VQAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|77462404|ref|YP_351908.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides 2.4.1] gi|123757774|sp|Q3J5C7|SYGB_RHOS4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|77386822|gb|ABA78007.1| Glycyl-tRNA synthetase, beta subunit [Rhodobacter sphaeroides 2.4.1] Length = 697 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 270/721 (37%), Positives = 397/721 (55%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + ++D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDQLETRED-KKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL+SILC+L +++A +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWGTG-----SLRWVRPLQSILCLL-SDEAGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V + Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFEDYRAKLARAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D G I++GN +V++ARL DA FW+ D + Sbjct: 293 EKFVTVANRETADHGETILKGNGKVLSARLSDARFFWENDLRTVKTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ L V FH ++G+Q R++RI L ++IA L+ A L A ++KA Sbjct: 341 ----LEGMAEGLK--QVTFHNRLGSQAARIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S+ V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGSYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI-----------------DI 523 DK+DTL FW I EKP+GSKDP+ALRRA LG+IR++L N Sbjct: 455 DKIDTLAGFWRIGEKPTGSKDPFALRRAALGVIRLLLTNNSRAGLMGIMLPAMNRHLEPF 514 Query: 524 PLSQFIEDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 S F + +L FFHDRLK++L ++ IRHD+I+A L P ND+L +V + L+ F Sbjct: 515 DTSDFTPYERDLLAFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSAFL 574 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G L KR IL E K+ E S P++ +AE+ L+A + I Sbjct: 575 KTDDGTNLLQGFKRANNILTQAEAKDGVEYSFGADPKFAETDAERALFAALETAEAAIGP 634 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + + ++ PI+ FF+ V VN D+ +R NRL++L I+ V ++ + Sbjct: 635 ALQAEDFAAAMSAMAALRAPIDAFFETVQVNADNAVLRRNRLNMLHSIRATCARVADLTR 694 Query: 701 I 701 I Sbjct: 695 I 695 >gi|71281166|ref|YP_266788.1| glycyl-tRNA synthetase subunit beta [Colwellia psychrerythraea 34H] gi|123761120|sp|Q48AS2|SYGB_COLP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71146906|gb|AAZ27379.1| glycyl-tRNA synthetase, beta subunit [Colwellia psychrerythraea 34H] Length = 688 Score = 763 bits (1972), Expect = 0.0, Method: Composition-based stats. Identities = 201/719 (27%), Positives = 348/719 (48%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + A + G L + Y +++ + TP R + + L Sbjct: 5 TLLIELGTEELPPKSLKTLATAFYDNIKGQLDSHNLSYSDIKWFATPRRFAVQVFDLVEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA G+ RS G++ ++ KG+ L Sbjct: 65 QDDKIVEKRGPAVNVAFDDAGNASKAAQGWARSNGIEVDQAERLVT--GKGEWLLHRATV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +++ +V A+ K+P K MRW + +IRP++++ + ++ I Sbjct: 123 SGKAVVELIPDMVTTALNKLPIAKPMRWGAERT-----QFIRPVQTLTMLFGSD-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + N GHRFH + + + Y +L +A V +D R+N I+ ++ Sbjct: 173 IAGEALGVSSSNQVQGHRFHHEGLVTINHANDYQAELAKAYVEVDFNERQNKIVAQIKQV 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + + D++LL E+ LVEW +G+FD+ +L +P E + ++K +QK F + Sbjct: 233 ANDIDAVALIDEELLNEVTALVEWPVTLVGTFDEDFLNVPAEPLIYSMKDHQKYFPVTDK 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N FI V+NI++ D I+ GN +V+ RL DA F+K D+ Sbjct: 293 NGQLVNKFIFVTNIESKDPN-TIIFGNEKVIRPRLADAEFFFKTDKK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L+ R+ L+ V+F ++GT + RI L + IA+ ++ + RA Sbjct: 339 -------QSLESRLKSLE--SVLFQKQLGTLKAKSERIASLSQFIAEQLNENAQDAYRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL +++V EFP++QG +GK YA+ EN + A+E+ +PR +++P I Sbjct: 390 LLSKTDLMSDMVLEFPQVQGTMGKYYALHDGENENIAQALEDQYRPRFAGDSLPEANIGC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------- 528 V+++DK+D+L+ + IN+ P G KDP+ALRRA +G IRII+E ++D+ LS Sbjct: 450 AVAISDKIDSLVGIFGINQAPKGDKDPFALRRAAIGSIRIIIEKQLDLDLSTLINKSIEL 509 Query: 529 --------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +++ F R + + ++ I D+I+A+L + L IK + F Sbjct: 510 FGDKLVNENTATDVLEFIMGRFRAFYQEQGISVDVIQAVLAKKPSAPLDFEKRIKAVTFF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ ILA K + E+ + +AE+ L + D + Sbjct: 570 GELPEAATLAAANKRVGNILA---KFDGELYQSFNTDLATEQAERDLADIYRDISLKVAP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 M K Y L + PI+ FFD V+V DD V+ NRL+LL I+N + ++ Sbjct: 627 LMADKNYQAALSELAQLKAPIDTFFDGVMVMSDDEAVKINRLTLLNQIRNSFFAIADIS 685 >gi|88860611|ref|ZP_01135248.1| glycyl-tRNA synthetase beta subunit [Pseudoalteromonas tunicata D2] gi|88817206|gb|EAR27024.1| glycyl-tRNA synthetase beta subunit [Pseudoalteromonas tunicata D2] Length = 689 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 207/719 (28%), Positives = 345/719 (47%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + AE L L + Y++ Y +P RL + + GL Sbjct: 5 NLLIEIGTEELPPKSLRTLAEALLQNFCDELATLELSYESASWYASPRRLGVKVFGLINA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP + G KA G+ R G++ +++ D KG L V + Sbjct: 65 QQDKEVEKRGPALQAAFDAEGNPTKAAIGWARGCGIEVDQAERLETD--KGAWLLHVAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +E ++ + A+ K+P K MRW + +IRP+ ++ + Sbjct: 123 AGQAVESLIPDALSNALTKLPIAKPMRWGAYKT-----QFIRPVHTVTVFY-----GPSL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + N GHRFH P I++ D LE+A V+ D E R+ I L Sbjct: 173 VEGTILGKAISNQLQGHRFHHPARIEINHADEAFAALEKAYVVADYEARKALIKGQIEAL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ + D+ LLEE+ LVEW +F++ +L +P E + T+K +QK F + Sbjct: 233 AAEHNAIVAMDESLLEEVTSLVEWPVTLTATFEESFLSVPSEALIFTMKDDQKYFPLLDQ 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N F+ VSNI++ + A ++ GN +VV RL DA F++ D+ Sbjct: 293 DGNLLNKFLFVSNIESKNP-AQVISGNEKVVRPRLADAQFFFETDKK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ R+A L+ V+F ++GT ++ RI L IA+ + A V RA Sbjct: 339 -------KTLESRLASLET--VLFQKELGTLKDKSERIAELSGFIAEKLGASVVDATRAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL TE+V EF ++QG +G YA E + A E PR + +P++ IS Sbjct: 390 LLSKTDLMTEMVMEFTDVQGIMGMHYARHDGETEAVALAQNEQYMPRFSGDALPSSLISC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 +V+LADK D+L+ + I + P G KDP+ALRRA +G +RII+E ++++ I + Sbjct: 450 SVALADKFDSLVGIFGIGQAPKGDKDPFALRRAAIGALRIIVEKELNLDALDIINKAMTL 509 Query: 536 ---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F R + + D+ I D+I+A+L L +K ++ F Sbjct: 510 FGEKLSNPNVAEDVFEFLLGRFRAWYQDQGIEVDIIQAVLARRPSQPLDFDRRVKAVSHF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + + KR+ ILA + K E +++ L+ EAEK L A + + + Sbjct: 570 RSLEQAAALAAANKRVANILAKNDFKAAE---QVNENLLVEEAEKELAAQVKRYQAELAP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y + + L +I EP++ FFD V+V +D ++ NR +LL ++++ L V ++ Sbjct: 627 VIAAGDYQSVLEKLAAIREPVDTFFDNVMVMAEDEAIKQNRFTLLNELRSLFLQVADIS 685 >gi|332560288|ref|ZP_08414610.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides WS8N] gi|332278000|gb|EGJ23315.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides WS8N] Length = 697 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 272/721 (37%), Positives = 397/721 (55%), Gaps = 46/721 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + ++D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDQLETRED-KKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL+SILC+L +++A +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWGTG-----SLRWVRPLQSILCLL-SDEAGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V D Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFDDYRAKLARAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I++GN +V++ARL DA FW+ D + Sbjct: 293 EKFVTVANRETADHGATILKGNGKVLSARLSDARFFWENDLRTVKTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ L V FH +G+Q R++RI L ++IA L+ A L A ++KA Sbjct: 341 ----LEGMAEGLK--QVTFHNMLGSQAARIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S+ V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGSYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI-----------------DI 523 DK+DTL FW I EKP+GSKDP+ALRRA LG+IR++L N Sbjct: 455 DKIDTLTGFWRIGEKPTGSKDPFALRRAALGVIRLLLTNNSRAGLMGIMLPAMNRHLEPF 514 Query: 524 PLSQFIEDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 S F + +L FFHDRLK++L ++ IRHD+I+A L P ND+L +V + L+ F Sbjct: 515 DTSDFTPYERELLAFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSGFL 574 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + G L KR IL E K+ E S P++ +AE+ L+A + I Sbjct: 575 KTDDGTNLLQGFKRANNILTQAEAKDGVEYSFGADPKFAETDAERALFAALETAEAAIGP 634 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + + + ++ PI+ FF+ V VN D+ +R NRL++L I+ V ++ + Sbjct: 635 ALQAEDFAAAMSAMAALRAPIDAFFETVQVNADNAVLRRNRLNMLHSIRATCARVADLTR 694 Query: 701 I 701 I Sbjct: 695 I 695 >gi|254463281|ref|ZP_05076697.1| glycyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium HTCC2083] gi|206679870|gb|EDZ44357.1| glycyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium HTCC2083] Length = 685 Score = 762 bits (1969), Expect = 0.0, Method: Composition-based stats. Identities = 282/710 (39%), Positives = 407/710 (57%), Gaps = 36/710 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ + E G+ Y + + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQGRAADDLKKLMTDGMVEAGLTYASAAAFSTPRRLCLTVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL + +D KG VY A K R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGLTRDKLEE--RDTSKGAVYFASFEKQGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL SILC+L +++A +++ LD+ Sbjct: 119 PEIIAEVLEQTIRTFPWPKSMRWGTG-----SLRWVRPLHSILCVL-SDEASSEVVPLDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G TYGHRF AP+ I V + Y L+ A V+L+ R +AI DA A A G Sbjct: 173 DGITSGKATYGHRFMAPNQITVNGFEDYEAQLKRAFVVLNAGERADAIWEDAKNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG + +L LP E+++ ++K +QK F + + Sbjct: 233 LEVVEDAGLLREVAGLVEWPVVLMGEIAEDFLGLPPEVLQTSMKEHQKFFSVKNAKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + D GA I+ GN +V+ ARL DA FW+ D + + +A Sbjct: 293 ERFITVANRETVDNGATILAGNQKVLFARLSDAKFFWENDLRVATSDMASWTAA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GTQ ER+ RI L +++A ++ AD +RA L+KA Sbjct: 347 -------------LSNVTFHNKLGTQAERIERIAALARELAPVVGADADEAERAAKLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA E + A EEH P GP + VPT +S+ VSLA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYAEAAGETAAVAAAAEEHYAPLGPSDAVPTAPVSVAVSLA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL------ 534 DK+DTL FWAI+EKP+GSKDP+ALRRA LGIIR++LEN + I ++ Sbjct: 454 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGIIRLVLENDLTIRSKPLFTKADMRADSDD 513 Query: 535 -ILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 + FFHDRLK+YL D+ +RHD+I+A + ND+L +V L F + G L Sbjct: 514 LLSFFHDRLKVYLRDQGVRHDVIDACIAMEGNDDLALLVKRAVALEAFLKTEDGTNLLQG 573 Query: 593 AKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR IL+ EE K+ E S ++ E E+ L+A ++ G I+ ++ + + Sbjct: 574 FKRANNILSKEEDKDGVEYSYGGDVKFAETEEERALFAALTAEGPAIETALKAEDFAGAM 633 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + PI+ FF+ V VN D++ VR NRL+LL I+ ++ V ++ ++ Sbjct: 634 SGMAGLRAPIDAFFEAVQVNSDNQTVRRNRLNLLSDIRKLVGSVADLSRV 683 >gi|121534207|ref|ZP_01666032.1| metal dependent phosphohydrolase [Thermosinus carboxydivorans Nor1] gi|121307310|gb|EAX48227.1| metal dependent phosphohydrolase [Thermosinus carboxydivorans Nor1] Length = 685 Score = 762 bits (1967), Expect = 0.0, Method: Composition-based stats. Identities = 216/730 (29%), Positives = 347/730 (47%), Gaps = 73/730 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EEIPA+ A L I L+ V + N+R TP RL L + + Sbjct: 1 MAKDLLLEIGTEEIPAKFMPGALAQLESIAKSKLETYRVSFSNVRVVGTPRRLALIVYQV 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 ++ E GP + G KA GF RS G+ K G VY A+ Sbjct: 61 EEKQTDRKSENKGPSLKIAYDEKGLPTKAALGFARSQGVDVSQLV-----AKDGYVY-AI 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + R ++++L ++P I + +PK+MRW + RP++ ++ + Sbjct: 115 VEEAGRPVQEILPILLPEIILALSFPKNMRWGDLD-----VRFARPIRWLVALY-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++ L + GN+T GHRF + P+ + S D Y L E V++D + RR I Sbjct: 165 NEVVPFTLAGVASGNMTQGHRFLSKGPVVISSPDDYFAKLAEHHVMVDQDVRRRVIREQV 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A G + D++LLEE++ LVE+ G F++KYL LP E++ ++ +Q+ F Sbjct: 225 ESIAVDQGGVVSIDEELLEEVVYLVEYPTALYGRFEEKYLSLPPEVVITPMREHQRYFPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L FI V N A + + GN RV+ ARL DA F+ DQ Sbjct: 285 FGKDGKLLPVFITVRNGGA-EYIDIVRHGNERVLKARLADAQFFFTEDQK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 PL +R+ +L +VF +GT ++ R+ L IA+ +++ Sbjct: 334 ----------TPLAERVEKLKT--IVFQEGLGTLYDKTLRLARLAAVIARKAGLPESEIP 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++R+ L+KADL T +V EF ELQG +G+EYA L E + AI EH PR + +P Sbjct: 382 TIERSAYLAKADLVTGMVYEFTELQGIMGREYARLSGEPEAVAQAIFEHYLPRFAGDKLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V +ADKLD ++ ++ P+GS+DPYALRR LGI+ I+++ K + L++ + Sbjct: 442 QSPAGRVVGIADKLDNIVATFSRGLIPTGSQDPYALRRQALGIVNILIDAKYHLSLTEMV 501 Query: 530 EDQNLIL-----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + +L FF R+K L + +RHD+I+A++ DNL Sbjct: 502 QHTMDLLGIHDPDRRTKLIDEIGDFFRLRIKNILTEEGMRHDMIDAVIAAGTDNLYDTWL 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K L + ++ + + R + I+ I P EAE LY Sbjct: 562 RAKALAFEGGTMAMQRAVQAFTRAGNLAKNA------ITETIDPSLFSTEAEHNLYQAYL 615 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + E + + Y + ++ + PI+ FF V+V V+D VR+NRL+LL+ I + Sbjct: 616 SARQTVAEKLHVRDYVGVLKVMAEMAGPIDAFFGAVMVMVEDMAVRNNRLALLKAITGLT 675 Query: 693 LIVINVQKIV 702 V ++ KIV Sbjct: 676 ANVADLSKIV 685 >gi|258516200|ref|YP_003192422.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum acetoxidans DSM 771] gi|257779905|gb|ACV63799.1| glycyl-tRNA synthetase, beta subunit [Desulfotomaculum acetoxidans DSM 771] Length = 698 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 217/734 (29%), Positives = 341/734 (46%), Gaps = 74/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFL EI +EEIP+R A +L I + L+E + Y + Y TP RL LY++ L Sbjct: 1 MAKDFLFEIGTEEIPSRFIAPALAELKEITVKALEENRLSYGKVNTYGTPRRLVLYIEAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G +A GF +S + +++ + A+ Sbjct: 61 AEEQDSLLREVKGPAVKVAFTPEGEPTRAAVGFAKSQQVDIKD--LVRRQVATVEYLYAI 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ R +VL + P+ I + +PK MRW + RP++ +L + E Sbjct: 119 KQELGRPAYEVLTELCPLLISSLHFPKPMRWGDLE-----VRFARPIRWLLALWGGET-- 171 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + G +T+GHRF + P++V S Y+ L V++D + RR I Sbjct: 172 ---VNFSFAGLSSGKVTFGHRFLS-GPLEVDSPKDYLARLRSNYVIVDIDERRQMIWQQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G + D+DLLEE+ LVE+ GSF++KYL LP+E++ ++ +Q+ F Sbjct: 228 QNLAEQSGGVVEPDEDLLEEVCNLVEYPTALCGSFEEKYLHLPKEVLITPMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V N + GN +V+ ARL DA F++ D Sbjct: 288 LDSEGRLMPKFIAVRNGIHK-YLDTVRAGNEKVLRARLADAEFFFEED------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 L PL ++ L VV+ +GT ++V R+ L ++ L+ A Sbjct: 335 --------LKTPLADKVEGLK--KVVYQESLGTVHDKVKRVIKLADYLSDLLIVGAAVKE 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA VL KADL T +V EF ELQG +G+EYA+ E AI EH PR +++P Sbjct: 385 QIMRAAVLCKADLVTNMVYEFTELQGIMGREYALKSGEEPVVAQAIFEHYLPRFAGDSLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +++ADK DT+ +AI +P+GS+DP+ALRR LGI IIL + + I LS + Sbjct: 445 ETLPGKILAIADKFDTVAGCFAIGIQPTGSQDPHALRRQALGICHIILSSGLKISLSALV 504 Query: 530 EDQ---------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + +FF RLK D + +D I+A+L D+ Sbjct: 505 TAAYASYLEQEQVQLKLGLDELLVEMWVFFQIRLKNIFSDCGLGYDTIDAVLAAGFDDFS 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + L++F + L R + + EI P++L+ ++E+ LY Sbjct: 565 DTWERARALSQFRNEPAFSDLLTVFNRANNLSKNVDVA------EIKPEFLVDDSERNLY 618 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + MD K Y + + I EP+ FFD V+V +D +RDNRL+LL+ + Sbjct: 619 DHFLALKKQVAVEMDKKNYLGVLKAVAEIREPLGKFFDSVMVMAEDTNIRDNRLALLKSL 678 Query: 689 KNIILIVINVQKIV 702 ++ V + KIV Sbjct: 679 AGLMQSVADFSKIV 692 >gi|56459117|ref|YP_154398.1| glycyl-tRNA synthetase subunit beta [Idiomarina loihiensis L2TR] gi|81821718|sp|Q5QY35|SYGB_IDILO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56178127|gb|AAV80849.1| Glycyl-tRNA synthetase, beta subunit [Idiomarina loihiensis L2TR] Length = 688 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 218/719 (30%), Positives = 368/719 (51%), Gaps = 60/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + + L + LK + + ++ Y TP RL + +K + Sbjct: 5 NLLIELGTEELPPKALKSLRDSLKSGIESGLKNAELSFDSIEAYATPRRLAVLVKQVETE 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP + G KA +G+ RS G+ ++K D KG+ L Sbjct: 65 QQDKEVEKRGPAINVAFDDTGKPTKAAEGWARSNGITVEQADRLKTD--KGEWLLHKATV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +++ I+ AI+ +P PK MRW S +IRP+ ++ +L +E + Sbjct: 123 KGQALSVLVQGILEAAIKALPIPKPMRWGD-----STAQFIRPVHTLTVMLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID ++ E GHRFH+P ++ +D+Y+ L EA V+ + E R I ++ RL Sbjct: 173 IDAEILETKSARFIQGHRFHSPQGFELDHVDNYLFKLREAKVIANFEERIETIQSEVSRL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 AS +G ++++D +L+EE+ LVEW SFD+ +L +P+E + +T+K +Q+ F Sbjct: 233 ASELGGQVIQDDELVEEVAALVEWPVALTASFDQGFLAVPKEPLIVTMKDDQRYFPVEDG 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI ++NI++ D I++GN +VV RL DA F++ D+ Sbjct: 293 KGNLLPQFIFITNIESRDP-QQIIKGNEKVVRPRLADAQFFFESDKKV------------ 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+A LD V+F ++G+ G++ RI VL KIA + ADV +RA Sbjct: 340 --------TLESRVAALD--SVLFQKQLGSIGDKARRISVLAGKIANQLTADVKASERAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L KADL +++V EFPE QG +GK YA+ E+ +AIE+H PR + +P K + Sbjct: 390 LLCKADLVSDMVSEFPETQGVMGKHYALNDGESPVVAEAIEQHYWPRFSGDELPLTKEAC 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADKLDTL+ + I + P G +DP+ALRRA LG++R ++E K+ + L + + Sbjct: 450 AVALADKLDTLVGIFGIGQVPKGDRDPFALRRAALGLLRTLVERKLSLDLHELLAASVEG 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R + + D+ I D+I+++L +K + F Sbjct: 510 FGDKLSNNTVATDVFDFLLGRFRPWYQDQGITVDVIQSVLARSPSKPTDFDQRVKAVQSF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S + KR+ ILA K + EIS + L E+E LY ++ ++ Sbjct: 570 KSMDSAASLAAANKRVGNILA---KSDEEISGNVDEALLQEESETTLYRLVKQTEGAVKP 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + +Y L + EP++ FF+ V+VN DD +VR NRL+LL ++ + L + ++ Sbjct: 627 LIAAGKYSDALTHLSELKEPVDAFFEHVMVNADDDKVRINRLNLLFRLRQLFLEIADIS 685 >gi|119773167|ref|YP_925907.1| glycyl-tRNA synthetase subunit beta [Shewanella amazonensis SB2B] gi|166227923|sp|A1S1I1|SYGB_SHEAM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119765667|gb|ABL98237.1| Glycine--tRNA ligase [Shewanella amazonensis SB2B] Length = 689 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 216/720 (30%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + AE L + + ++++ Y P RL LY+KGL+ Sbjct: 5 NLLIEIGTEELPPKALRTLAESFQANFSEELTKAELPFESIEWYAAPRRLALYVKGLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + Sbjct: 65 QEDKVVEKRGPAVQSAFDADGNPTKAAEGWARGNGITVAEAERLATD--KGEWLVYRANV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++ + A+ K+P PK MRW + + +IRP+ ++ +L +E + Sbjct: 123 AGEPTSVLVPAMTQRALDKLPIPKPMRWGSNST-----QFIRPVHTVTLLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 I ++ I GHRF + D+Y+ L+E V+ D + R+ I DA + Sbjct: 173 IAGEVLGIQSDRTIRGHRFMGESSFSLDHADNYLAALKERGKVIADYQARKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G ++ LLEE+ LVEW V F++K+L +P E + T+K +QK F + Sbjct: 233 AAAVIGGNADIEESLLEEVASLVEWPVVLTAHFEEKFLAVPAEALVYTMKGDQKYFPVFS 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 293 NDGKLLPNFIFVANIESKDP-AQIIAGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L R+A L+ VVF ++GT +R RI L IA I A RA Sbjct: 341 ---------TLASRLASLET--VVFQKQLGTLKDRAERISALAGFIAGQIGASSEDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ ++VP+ +S Sbjct: 390 GLLSKCDLMTNMVMEFTDTQGTMGMHYARLDGEAEAVAVALEEQYKPKFSGDSVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V+LA+KLDTL + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALAEKLDTLSGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAVE 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F R + + D+ I D+I A+L D I ++ Sbjct: 510 LHGSNLSNALAADEVLEFLMGRFRAWYQDKGISTDVILAVLARRPTRPADFDDRILAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K E+ I+ L AEK L A +++ I Sbjct: 570 FRTLEQAAALAAANKRVSNILA---KVEGELPSSINDALLSEAAEKALAAKLAEVTPVIA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y Q L ++ E ++ FF+ V+V DD+ +R+NRL+LL +++ L V ++ Sbjct: 627 PLFAAGNYQQALTELAALRESVDQFFEDVMVMADDQALRNNRLALLGNLRDQFLHVADIS 686 >gi|254483305|ref|ZP_05096536.1| glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2148] gi|214036400|gb|EEB77076.1| glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2148] Length = 692 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 201/726 (27%), Positives = 344/726 (47%), Gaps = 61/726 (8%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L+E+ +EE+P + + LK+ + + + + +P RL + + Sbjct: 1 MSNETLLIELGTEELPPKALKSLGLAFRDGITAGLKQRELGFGEVSWFASPRRLAVQIAQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + +K E LGP + G A GF + G+ +I+ KG Sbjct: 61 VQTQGEDKDIEVLGPPIDRARDSEGNWTPAASGFAKKQGVAAQDLQEIET--PKGTRLGL 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + D L I+ I +P PK MRW S ++RP++ ++ +L + Sbjct: 119 KKTEAGLHTSDCLNDIIVETIAGLPIPKRMRWGA-----SRVEFVRPVQWLIAMLGEKFD 173 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 KI+ IP GN T GHRFH+ I ++ D Y L A V+ + + R+ I Sbjct: 174 HGKIL-----GIPTGNTTRGHRFHSSGDILLEKADDYEEVLANAHVVANFDKRQAMIREQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ASAV V D DLL+E+ GLVEW GSF++++L +P E + ++K +QK F Sbjct: 229 VEAEASAVNASAVIDPDLLDEVTGLVEWPVALTGSFEERFLEVPAEALISSMKEHQKYFH 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI ++NI++ D ++ GN RV+ RL DA F++ D+ Sbjct: 289 LVDANGELKPNFITLANIESKDPVQ-VIAGNERVIRPRLADAAFFFETDKK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 PL +R A+L+ V+F K+GT ++ R++ L +A++I AD Sbjct: 339 -----------TPLAKRAAKLET--VIFQQKLGTLADKARRVQKLAGSLARMIGADADKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +R+ +L+KADL T++V+EF ++QG G YA+ E+ AI + P+ + +P + Sbjct: 386 ERSALLAKADLVTDMVQEFSDMQGVAGSYYALHDGEDAEVAAAIAQQYWPKFAGDRLPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + + LAD+LDTL+ + I + P+GSKDP+ALRRA+L ++RII+E K+++ L +E Sbjct: 446 NTACALGLADRLDTLVGIFGIGQPPTGSKDPFALRRASLAVLRIIVEKKLELDLRDCLEL 505 Query: 532 QNL---------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + +R + + + +I ++ A+ L I + Sbjct: 506 ATQQYPQDLLAEGTTDQVFDYMIERFRAWYEEENIPVEVFRAVSARRISQPLDIQQRVLA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 +N F + + KR+ IL + N E+ L AEK L +S T Sbjct: 566 VNAFSQLPEASALAAANKRVSNIL--GKLSNDHSFGEVRVNLLQEAAEKELTENLSALST 623 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ Y L + P++ FFD+V+VN ++ +R+NRL+LL+ +++ L V Sbjct: 624 IASGHLEKGEYSAALASLAGLRAPVDRFFDEVMVNAENEALRNNRLNLLKALRDQFLEVA 683 Query: 697 NVQKIV 702 ++ ++V Sbjct: 684 DISQLV 689 >gi|256823752|ref|YP_003147715.1| glycyl-tRNA synthetase subunit beta [Kangiella koreensis DSM 16069] gi|256797291|gb|ACV27947.1| glycyl-tRNA synthetase, beta subunit [Kangiella koreensis DSM 16069] Length = 690 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 195/727 (26%), Positives = 347/727 (47%), Gaps = 69/727 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D L E+ +EE+P + ++ L L+ + ++ Y P RL L ++ Sbjct: 1 MSQHDLLFELGTEELPPKALKTLSDALRDNFAANLQSNDFTFDSIENYAAPRRLALTIRN 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P+K ERLGP V G+ K A GF +S G++ +I+ D KG+ Sbjct: 61 LADSQPDKNVERLGPAVAGAFNDDGSAKPAAVGFAKSCGVEVDQLDRIETD--KGERLGY 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + + ++++ ++ A++K+P PK MRW +IRP+ + + Sbjct: 119 TIAQKGQPLSELIEDMLNSALKKLPIPKPMRWGDRSE-----QFIRPVHWAVLLF----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++++ + + N + GHRF +P + S D Y+ L A V D E R+ I Sbjct: 169 GDQVLNATVLGVKTSNQSRGHRFMSPDWVTFNSADDYLSKLLTAKVNADYEQRKEQIRGQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A +G D+ LL+E+ LVEW G FD ++L +P E + ++ +QK F Sbjct: 229 VKAEADKLGGVAQIDESLLDEVASLVEWPVALTGKFDTEFLAVPAECLISSMAEHQKYFH 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G L FI VSNI++ + ++++GN +V+ RL DA+ F++ D+ Sbjct: 289 VFDKDGKLMPNFITVSNIES-NRPQSVIEGNEKVIRPRLADAMFFFETDKKV-------- 339 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L+ L VVF ++G+ ++ R+ L K IA I A Sbjct: 340 ------------SLESHQDHLQ--KVVFQKQLGSILDKSIRVAHLAKYIAPKIGAIPEDA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA +LSK DL T +V EF LQG +G YA EN + A+ E P+ + + N Sbjct: 386 ERAALLSKCDLATNMVGEFDNLQGIMGTYYARHDGENENVAIAMTEQYLPKFSGDELAKN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++AD++D+L+ + + + P GSKDP+ALRRA +G++R I+EN++++ +++ + Sbjct: 446 SVGQCLAIADRVDSLVGIFGVGQGPKGSKDPFALRRAAIGLLRTIVENRLELDINELLSK 505 Query: 530 -----------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + + L+ F +RL+ D+ + + I A++ L Sbjct: 506 ANQLISERIDKANFYSHKQEALLDFLFERLRALYLDQGVSSNTISAVMALRPTQPLDFDA 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 IK + F + + E + KR+ ILA K + E+ I L E+ L I+ Sbjct: 566 RIKAVQFFQTLPEAESLSAANKRVKNILA---KADIEVPDAIDSGLLQEAEEQALAKTIT 622 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 D + Y L S+ + ++ FFD+V+VN DD V+ NRL++L+ ++++ Sbjct: 623 DAEAKLSAMNS---YQDKLQHLASLRDDVDAFFDKVMVNADDAAVKANRLAMLKKLQDLF 679 Query: 693 LIVINVQ 699 V ++ Sbjct: 680 GSVADIS 686 >gi|237801654|ref|ZP_04590115.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024513|gb|EGI04569.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] Length = 684 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 207/723 (28%), Positives = 332/723 (45%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + AE + L+ G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLAEAFLAGIEKGLQGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ GP G +A GF + G+ Q G Sbjct: 61 LSTQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVDLNEIDQ------SGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTMSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 IEELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVYDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGFYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVDTVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGTKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GNIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|192289649|ref|YP_001990254.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris TIE-1] gi|192283398|gb|ACE99778.1| glycyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris TIE-1] Length = 760 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 297/780 (38%), Positives = 414/780 (53%), Gaps = 101/780 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP + Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGKPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ +PV ++ PWPKSMRW + A W+RPL SI+ E + ++ ++ Sbjct: 121 IDVIAEFLPVIVRTFPWPKSMRWGARSARPGALQWVRPLHSIIATFGMETEEPDVVHFNV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP V+ + Y L A V+LD R++ IL DA LA A Sbjct: 181 DGIEAGQTTRGHRFMAPDAFSVRRFEDYEAKLFAAKVVLDSARRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GVL 299 ELVED+ LL+E+ GLVEW MGSFDK +L +P+E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDKDFLSIPDEVIRATIRANQKCFVVADPSTGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA F++ D Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ R+ RI+ L KIA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPKFD--QIVFHEKLGTQAVRIKRIQSLAAKIAPLVGADVEKTKRAAKLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDESVAAACEEHYKPQGPADRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFH 539 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++LEN + + L + Q + FH Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLENGLCLNLMPVVRPQASLFVFH 518 Query: 540 DRLK--------LYLHDRDIRHDLI----------------------------------- 556 + +K ++ + ++ Sbjct: 519 EWMKSENVQKIMALANEEGLTEEIFPIISASYEKKLGAFRQWNSQTESEVIRDPEKHAEL 578 Query: 557 -EAILRPENDNLLTIVDLIKH-----------LNEFFSSAKGEKFLLSAKRI-------- 596 + + D L D +K ++ F+ + L+ +R+ Sbjct: 579 RKLVSSRCYDLLSFFADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLA 638 Query: 597 --------------FQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 IL IEEKK+ R + EK L A I + Sbjct: 639 TDDGKNLLAGTKRAANILRIEEKKDGRAYDGAPDASLYAQDEEKALAAAIDRAKADAVAA 698 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 699 VAKEDFAAAMTAMAGLRPAVDAFFDKVTVNADDKAVRENRLKLLNEIRAATRAVADFSKI 758 >gi|167031097|ref|YP_001666328.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida GB-1] gi|189082270|sp|B0KF22|SYGB_PSEPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|166857585|gb|ABY95992.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas putida GB-1] Length = 683 Score = 760 bits (1963), Expect = 0.0, Method: Composition-based stats. Identities = 207/722 (28%), Positives = 344/722 (47%), Gaps = 65/722 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P++ GP + G +A GF + G+ ++ + + G Sbjct: 61 LDVQQPDRSINIDGPPMQAAFKDGEPTQAALGFAKKCGV------ELAEIDQSGAKLRFS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + +L TI+ ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 QHIPGKATASLLPTIIEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 DQVVDCTILSQKAGRESRGHRFHHPENVVITTPANYVEDLRKAYVLADFAERRELISKRT 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 AELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LDSEGKLLPRFITVANVESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 334 ----------QPLETFNERLK--NVVFQAQLGTVYDKAERVSKLAAFIAPLIGGDAQRAG 381 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 RAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTL 441 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 TGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLTGAVEFA 501 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ F DRL+ D I ++ + + L ++ + Sbjct: 502 VKQFGAKVKAAGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAV 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 QAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQA 618 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V + Sbjct: 619 VQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVAD 678 Query: 698 VQ 699 + Sbjct: 679 IS 680 >gi|310816494|ref|YP_003964458.1| glycyl-tRNA synthetase, beta subunit [Ketogulonicigenium vulgare Y25] gi|308755229|gb|ADO43158.1| glycyl-tRNA synthetase, beta subunit [Ketogulonicigenium vulgare Y25] Length = 690 Score = 760 bits (1963), Expect = 0.0, Method: Composition-based stats. Identities = 272/723 (37%), Positives = 398/723 (55%), Gaps = 55/723 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +AA+DL ++ L E G+ Y+ + TP RL L L GL+ Sbjct: 1 MADLLIELFSEEIPARMQTRAADDLRRLVTDGLVEAGLTYEGAGAFSTPRRLVLTLSGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GPR A + A+ GFLR+TGL T+ ++ GD Y AV KP R Sbjct: 61 AQSRAVREERKGPRTNAPEAALQGFLRATGL-TVDQLDVR-----GDTYFAVTEKPGRAA 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ A++ PWPKSMRW + + W+RPL SI+C+L ++++ +D+ Sbjct: 115 PEIIAEVLTSAVRNFPWPKSMRWGSGN-----LRWVRPLHSIICLL-----DDQVVPVDI 164 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V Y L+ A V+L + R + I DA A A G Sbjct: 165 DGIVAGNTTRGHRFMAPGVITVTGFADYEEKLQAARVMLRADQRADTIWTDATNAAFAKG 224 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG + +L LP E+++ +++ +QK F R Sbjct: 225 LEVVEDKGLLAEVAGLVEWPVVLMGPIGEAFLGLPPEVLQTSMREHQKFFSLRNPATGRI 284 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI +D GA I+QGN +V+AARL DA FW+ D + +A Sbjct: 285 EAFITVANILTADDGATILQGNGKVLAARLSDARFFWENDLRTVSRAGLEGMAA------ 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH ++G+Q +R++RI + + +A + AD A + KA Sbjct: 339 ------------GLANVTFHNRLGSQTDRIARIEAMARALAPVTGADADEAALAARVVKA 386 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA + + +A + H +P GP + VP +S TV+LA Sbjct: 387 DLRSEMVGEFPELQGTMGGYYARAAGLSDAVANACKGHYQPLGPDDAVPHEAVSATVALA 446 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DKLDTL FWA++EKP+GSKDP+ALRRA LG+IR++L N + +PL + Sbjct: 447 DKLDTLTGFWAMDEKPTGSKDPFALRRAALGVIRLVLGNGLRLPLRDTLAAPLAANFAAS 506 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEF 580 +NL+ FFHDRLK++L D + HD+I+A L P ND+L +V + L F Sbjct: 507 GTAGETAPVAENLLGFFHDRLKVFLKDEGLSHDVIDACLAMPGNDDLDLLVRRARALQAF 566 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + GE + KR IL E K+ E S P + E E+ L+A ++ I Sbjct: 567 LKTDDGENLVQGFKRANNILTQAEAKDGVEYSFGADPAFAEDEVERALFAALTRAEGQIT 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + + ++ PI+ FF V VN ++ VR NRL+LL I+ I L V ++ Sbjct: 627 PAIAAEDFAGAMAAMAALRAPIDAFFAGVQVNAENAIVRRNRLNLLGQIRTICLQVADLS 686 Query: 700 KIV 702 ++V Sbjct: 687 RLV 689 >gi|86137955|ref|ZP_01056531.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. MED193] gi|85825547|gb|EAQ45746.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. MED193] Length = 741 Score = 760 bits (1963), Expect = 0.0, Method: Composition-based stats. Identities = 278/764 (36%), Positives = 405/764 (53%), Gaps = 88/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y + TP RL L L+GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRMTDGLVEAGLTYAGAAAFSTPRRLTLALEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL + ++ KG VY A++ KP R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGLTRDQLEE--RETPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILC L +++ +++ L++ Sbjct: 119 AEIIAEVLEATIRNFPWPKSMRWGAG-----SLRWVRPLHSILCQL-SDENGSEVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V + Y L+ A V+LDP R+ AI +A A A G Sbjct: 173 DGIKAGTVTQGHRFMAPGEITVSGFEDYAAKLKRANVVLDPVERQEAIWQEAGNQAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V +G D ++L LP E+++ ++K +QK F + + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLLGDIDAEFLELPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F V+N + +D GA I+ GN +V++ARL DA FW+ D + + ++ + Sbjct: 293 EGFFTVANRETADQGATILAGNQKVLSARLADAKFFWENDLRVAKSETGMEAWTGQ---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GTQ ER+ RI L ++IA ++ AD L ++A ++KA Sbjct: 349 -------------LSNVTFHNKLGTQAERIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPQEVANACEMHYSPLGPSDDVPTEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI----------- 529 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + L +F Sbjct: 456 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENNARMSLDRFFDGQLLRIESAL 515 Query: 530 --------------EDQNLILF------FHDR----------------------LKLYLH 547 E +F DR L + H Sbjct: 516 DASLPDAGIASLLKEIAEHGVFGAAFRVVRDRLGENAERAFLDLETKVPDLSDDLLSFFH 575 Query: 548 DR--------DIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DR IRHD+I+A + ND+L +V + L +F +S G L KR Sbjct: 576 DRLKVFLRDQGIRHDVIDACIAMAGNDDLTLLVKRARALEDFLNSEDGTNLLQGFKRANN 635 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL E+K+ E S ++ ++EK L+A + I +++ + + + ++ Sbjct: 636 ILTQAEEKDGVEYSYGADVKFAEDDSEKALFAALEASEGAISAAIEAEDFAAAMGGMAAL 695 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ FF+ V VN D VR NRL+LL I+ + V ++ +I Sbjct: 696 RGPVDAFFEAVQVNSDKEVVRRNRLNLLSQIRKVCGQVADLSRI 739 >gi|260774575|ref|ZP_05883488.1| glycyl-tRNA synthetase beta chain [Vibrio metschnikovii CIP 69.14] gi|260610481|gb|EEX35687.1| glycyl-tRNA synthetase beta chain [Vibrio metschnikovii CIP 69.14] Length = 688 Score = 760 bits (1962), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 337/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + + ++ + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFSTELAAAELTHDGIKWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++K + +G+ L Sbjct: 61 AEKQADKVLEKRGPAVSVAFDAQGNPTKAAQGWARGNGITVEQADRLKTE--QGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + ++ + A+ +P K MRW + +IRP+K++ +L Sbjct: 119 QEVKGQAAKAIVVELAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +++ID ++ + GHRF + S Y LE+ V+ D E R+ I+ Sbjct: 169 DELIDGEILGVASARTIRGHRFMGEKEFTIDSAQQYPDILEQRGKVIADYETRKATIIAG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A VG D DL+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 AQQAAQQVGGIAELDDDLVEEVTALVEWPVVLTAKFEEKFLNVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI V+NI++ + +++GN +VV RL DA F Sbjct: 289 VYDANKQLLPNFIFVTNIESKEPR-HVIEGNEKVVRPRLADAEFF--------------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 FN DL L R+ +L+ +F K+GT ++ RI L IA+ I ADVA Sbjct: 333 -----FNTDLKSKLIDRLPQLETA--IFQQKLGTIKDKTDRITELAGYIAEQIGADVAQA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E + A+ E PR + +PT+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEPEAVALAMNEQYMPRFAGDQLPTD 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S +++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E + L + Sbjct: 446 GVSSALAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYKLDLVDLVAK 504 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNQAVEHDVIEFMLGRFRAWYQDEGFSVDVIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K ++ E+ L AEK L ++ Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFAGQLPAEVDLALLQEPAEKALGQDVAVMSE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ Y Q L S+ EP++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPVFASGDYQQALSQLASLREPVDAFFDNVMVMADDEALKQNRLTLLNDLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|294138812|ref|YP_003554790.1| glycyl-tRNA synthetase subunit beta [Shewanella violacea DSS12] gi|293325281|dbj|BAJ00012.1| glycyl-tRNA synthetase, beta subunit [Shewanella violacea DSS12] Length = 689 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 216/720 (30%), Positives = 343/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + K AE LK+ + +++ + P RL L + L+ Sbjct: 5 NLLIEIGTEELPPKSLRKLAESFLSNFTDELKKAELSFESAVWHAAPRRLALSVNQLATA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEEAGRLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + + +IRP+ ++ + +E I Sbjct: 123 VGVETKSLISAMAQRALDKLPIPKPMRWGSNKT-----QFIRPVHTVTMLFGSE-----I 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 + +L I + GHRF ++ D+Y+ L E+ VL D E R+ I DA Sbjct: 173 VAGELLGIKSDRVIRGHRFMGQASFELDHADNYLSALKEKGKVLADYEVRKTIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + +LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGIADLEDELLEEVCSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI + D I+ GN +VV RL DA F++ D+ Sbjct: 293 KTGQLLPNFIFVTNIVSKDP-QVIISGNEKVVRPRLADAEFFFENDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+ L+ VVF ++GT +RV RI + IA IDA+ RA Sbjct: 340 --------QTLEDRLVSLET--VVFQKQLGTIKQRVERISEMAGFIASSIDANAEDASRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A++E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVALALQEQYKPKFSGDTVPTASIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RI +EN + + L I Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRICVENNLPLDLVNLIAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + FF R + + D+ + D+I A+L IK + Sbjct: 510 LHGSNLSNETTAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFDSRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K +I I L AEK L +++ + Sbjct: 570 FRTLDQASALAAANKRVSNILA---KIEGDIPASIDASLLTENAEKALAEKLNELQPKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL + E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQEALALLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 >gi|289648601|ref|ZP_06479944.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 2250] Length = 684 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDANGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DR++ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRMRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|71736576|ref|YP_272325.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485592|ref|ZP_05639633.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] gi|298484619|ref|ZP_07002723.1| Glycyl-tRNA synthetase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123734064|sp|Q48QJ1|SYGB_PSE14 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71557129|gb|AAZ36340.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160843|gb|EFI01860.1| Glycyl-tRNA synthetase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|331011880|gb|EGH91936.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 684 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|26986805|ref|NP_742230.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida KT2440] gi|38258507|sp|Q88RR9|SYGB_PSEPK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24981401|gb|AAN65694.1|AE016196_5 glycyl-tRNA synthetase, tetrameric type, beta subunit [Pseudomonas putida KT2440] Length = 684 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 208/723 (28%), Positives = 344/723 (47%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP + G +A GF + G+ ++ + + G Sbjct: 61 LDVQQPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGV------ELAEIDQSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 SQHIPGKATVGLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 GDQVVDCTILSQKAGRESRGHRFHHPENVLITTPANYVEDLRKAYVLADFAERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LLDSEGKLLPRFITVANVESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 335 -----------QPLETFNERLK--NVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 GRAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D I ++ + + L ++ Sbjct: 502 AVKQFGAKIKAPGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 VQAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|313496432|gb|ADR57798.1| GlyS [Pseudomonas putida BIRD-1] Length = 684 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 208/723 (28%), Positives = 344/723 (47%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP + G +A GF + G+ ++ + + G Sbjct: 61 LDVQQPDRSINIDGPPLQAAFNAEGEPTQAALGFAKKCGV------ELAEIDQSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 SQHIPGKATVGLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 GDQVVDCTILSQKAGRESRGHRFHHPENVLITTPANYVEDLRKAYVLADFAERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LLDNEGKLLPRFITVANVESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 335 -----------QPLETFNERLK--NVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 GRAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTGAVEF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D I ++ + + L ++ Sbjct: 502 AVKQFGAKVKAPGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 VQAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|170719266|ref|YP_001746954.1| glycyl-tRNA synthetase subunit beta [Pseudomonas putida W619] gi|229558569|sp|B1J425|SYGB_PSEPW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169757269|gb|ACA70585.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas putida W619] Length = 683 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 207/722 (28%), Positives = 343/722 (47%), Gaps = 65/722 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALATLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P++ GP + G +A GF + G+ ++ + + G Sbjct: 61 LDVQQPDRSINIDGPPLQAAFKDGEPTQAALGFAKKCGV------ELSEIDQSGAKLRFS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 QHIPGKATASLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 DQVVDCTILSQQAGRESRGHRFHHPQNVVITTPANYVEDLRKAYVLADFAERRELIAKRT 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V+N+++ D IV GN +VV RL DA F+K+D+ Sbjct: 285 LDSEGKLLPRFITVANVESRDP-KQIVSGNEKVVRPRLTDAEFFFKQDKK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 334 ----------QPLETFNERLK--NVVFQAQLGTVYDKAERVSRLAAYIAPLIGGDAQRAG 381 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 RAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTL 441 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 TGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTPAVEFA 501 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ F DRL+ D I ++ + + L ++ + Sbjct: 502 VKQFGAKVKAAGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALKPGSALDFDQRVQAV 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 QAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQA 618 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V + Sbjct: 619 VQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVAD 678 Query: 698 VQ 699 + Sbjct: 679 IS 680 >gi|330985731|gb|EGH83834.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. lachrymans str. M301315] Length = 684 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTIHGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DLS 681 >gi|330961519|gb|EGH61779.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. maculicola str. ES4326] Length = 684 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L+ G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLQGAGLTYSAKQVYAAPRRLAVLITE 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS P++ GP G +A GF + G+ + + + G Sbjct: 61 LSTQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTLSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAYVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AVTQFGTKIKPAGLAEQVLDFIFDRLRARYEDEGVDVATYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GNIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|320326674|gb|EFW82719.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. B076] gi|320331351|gb|EFW87294.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 684 Score = 758 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 334/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTKSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKDP-AQIVTGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|144897875|emb|CAM74739.1| glycyl-tRNA synthetase beta chain [Magnetospirillum gryphiswaldense MSR-1] Length = 690 Score = 758 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 265/722 (36%), Positives = 401/722 (55%), Gaps = 55/722 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLEI+SEEIPARMQ +AAEDL ++ L + G+ + R Y TP RL L ++GL Sbjct: 1 MAELLLEIFSEEIPARMQARAAEDLLRMVTEGLGKNGLTFDGARSYVTPRRLVLVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRVGA ++A+ GFL STG+ K+D KG+ Y A++ K R Sbjct: 61 TAGPDVSEEKRGPRVGAPEQAMAGFLSSTGMALEQLE--KRDTGKGEFYFAIINKKGRPT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D K ++ A+ PWPKS RW T W+RPL+SILC+ ++ + Sbjct: 119 VDAAKEVIEAAMADFPWPKSQRWGT-----ETVRWVRPLQSILCLFAGA-----VVPVSF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN++ GHRF AP V Y L A V+LDP RR+AIL A A+A G Sbjct: 169 GPITAGNVSRGHRFLAPADFTVTDFADYSTKLAAAKVVLDPVERRHAILRQAEEAAAAAG 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L D LL E+ GLVE+ V +G D K++ +P+E++ +++++QK F +G LA Sbjct: 229 FALRADDGLLAEVTGLVEYPNVMIGVIDDKFMAVPQEVLITSMRSHQKYFSLLKADGSLA 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F++VSN++ +D GAAI GN RV+ ARL DA FW D+ Sbjct: 289 PRFLVVSNMETNDNGAAITAGNQRVLRARLSDAAFFWDTDRK------------------ 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVDRAIVLSK 419 + LD R+ +L +F+AK+GT ++V R+ +L + + ++A +RA L+K Sbjct: 331 --QRLDSRLPKLAER--LFYAKLGTMADKVERMAILARHLTAFVEAAHADEAERAARLAK 386 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G+ YA+ E + DAI H P+GP ++VPT ++I +L Sbjct: 387 ADLSTEMVGEFPELQGIMGRYYALNDGETPAVADAIAGHYAPQGPSDSVPTAPLTICAAL 446 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL----- 534 ADK+D+L+ F+AI+EKP+GSKDP+ALRRA LG+IR+++EN + +PL ++ + Sbjct: 447 ADKIDSLVGFFAIDEKPTGSKDPFALRRAALGVIRLVVENNLRLPLFAVLQFAHSLYKPG 506 Query: 535 -------------ILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIKHLNEF 580 + FF DR+K++L ++ +RHDL+ AI + D+L+ ++ + L +F Sbjct: 507 VLSADPRMVANDLLDFFADRMKVHLKEKGVRHDLVNAIFALGDEDDLVRLLARVDALADF 566 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 SS G L++ +R I+ IEEKK+ + L E+ L ++ + Sbjct: 567 LSSDDGSNLLIAYRRAANIVKIEEKKDGTSFAGPADVSRLKEPEEQALGQALAPARDALA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L + P++ FFD+V VN D E+R NRL LL I + V + Sbjct: 627 HALKAEDFADAMAALAQLRRPVDAFFDKVTVNADQAELRVNRLKLLAEIGAAMGEVADFS 686 Query: 700 KI 701 K+ Sbjct: 687 KV 688 >gi|289626617|ref|ZP_06459571.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 684 Score = 758 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DR++ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRMRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|300115242|ref|YP_003761817.1| glycyl-tRNA synthetase subunit beta [Nitrosococcus watsonii C-113] gi|299541179|gb|ADJ29496.1| glycyl-tRNA synthetase, beta subunit [Nitrosococcus watsonii C-113] Length = 691 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 222/722 (30%), Positives = 350/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+P + K +E L L L+ G+IY +++ Y P RL ++++ L+ Sbjct: 6 DLLIEIGTEELPPKALRKLSESLLQELGRGLQAAGLIYADLKGYGAPRRLAVWVQALTVS 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 PE++ ER GP + G A GF S G+ + +K + KG + R+ Sbjct: 66 QPEQVLERRGPALAAAVNEEGKPTAAARGFAGSCGVPVEALESLKNE--KGAWLVYRQRR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L TI+ + +P PK MRWS +IRP+ ++ + E++ Sbjct: 124 QGAPTRELLPTILAQVLHGLPIPKPMRWSDLPG-----EFIRPVHWLVLLF-----GEEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I L + G T+GHRFH P + + Y LE E VL D RR AI Sbjct: 174 IPATLLGVQAGRETWGHRFHHPESLYLTEPAVYASLLETEGKVLADFTARREAIYAQVVA 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G + + ++ LL+E+ GLVEW G FD+ +L LPEE++ T++ +QK F + Sbjct: 234 AAQQMGGKALIEEALLDEVTGLVEWPMALAGRFDEDFLKLPEEVLIATMQDHQKYFPVQD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L CFI V NI++ A+V+GN RV+ RL DA F+ D+ Sbjct: 294 EQGHLLPCFITVCNIESQCP-EAVVEGNERVIRPRLTDAAFFYTTDRK------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L R RL + F K+GT ER R+ L IA+ I + RA Sbjct: 341 --------ESLVSRRERLK--KITFQEKLGTVFERTERLAKLAGHIAKDIGGNGDWARRA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPELQG +G+ YA+ E +A+ E PR + +P Sbjct: 391 GLLSKCDLVTEMVTEFPELQGSMGRYYALHDKEPQEVAEALREQYLPRFAGDVLPCTAPG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE---- 530 +SLAD+LDTL+ + PSG KDPY LRRA LG++RII+E+++ + L ++ Sbjct: 451 QALSLADRLDTLVGLFGTGTPPSGDKDPYGLRRAALGVLRIIIESELALDLPSLLKLACE 510 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ + +RL+ Y + R D IEA+L D L +K + Sbjct: 511 TYHDRLTENNTAAHVYAYLLERLRGYYLEAGFRPDEIEAVLAVRPDQPLDFDRRLKAVAS 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KRI IL K + +I L AE+ L A + + Sbjct: 571 FRKLPEAESLSAANKRIRNILR---KSGERLPAQIESDLLQDSAEQTLAAQMYGLEREVV 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L + ++ FFD+V+V V+D ++R NRL+LL+ ++ + L V ++ Sbjct: 628 PLLERQDHRATLTALAGLRSAVDQFFDEVMVMVEDPKLRANRLALLERLQTLFLQVADIS 687 Query: 700 KI 701 ++ Sbjct: 688 RL 689 >gi|289677558|ref|ZP_06498448.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 684 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 204/723 (28%), Positives = 331/723 (45%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELAAQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDGTGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLEFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 ATQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|66043282|ref|YP_233123.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae B728a] gi|75504069|sp|Q500T7|SYGB_PSEU2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|63253989|gb|AAY35085.1| Glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. syringae B728a] gi|330970335|gb|EGH70401.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aceris str. M302273PT] Length = 684 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVAQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|330890240|gb|EGH22901.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. mori str. 301020] Length = 684 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 207/723 (28%), Positives = 334/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+IY + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLIYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|330952323|gb|EGH52583.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae Cit 7] Length = 684 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 204/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + + G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGITGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISQR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|90019661|ref|YP_525488.1| glycine--tRNA ligase [Saccharophagus degradans 2-40] gi|89949261|gb|ABD79276.1| Glycyl-tRNA synthetase, beta subunit [Saccharophagus degradans 2-40] Length = 690 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 345/725 (47%), Gaps = 61/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + + + L + Y + Y TP RL +++K L Sbjct: 1 MSYEFLVELGTEELPPTALKTLSNAFTQGICNGLDSAKLSYSAVESYATPRRLAVWVKDL 60 Query: 60 SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +P + + GP GA KA + F + G++ ++ K D + Sbjct: 61 AQSTPVEDLKVWGPPAAIAFKDGAPTKAAEAFAKKNGVEVSELAT--ENDGKADKLVVNA 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + D+L+ IV ++ +P K MRW S ++RP+ + +L + Sbjct: 119 KAGGEAAADLLEGIVNASLAALPISKRMRWGA-----SRAEFVRPVHWAIMLL-----ND 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 ++ L GN+T GHRFHA I +Q+ Y L E+ V+ E RR I Sbjct: 169 DVLPATLLGKATGNVTRGHRFHANTDITIQNAQSYASTLLEQGKVVASFEDRRATIAKQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A ++G E V DLL+E+ LVEW G FD+ +L +P E + ++K +QK F Sbjct: 229 AEQAKSLGGEAVISDDLLDEVSALVEWPVALGGRFDESFLSVPAEALISSMKEHQKYFHV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI VSNI+++D A ++ GN RV+ RL DA F++ D+ Sbjct: 289 VDSKGALLPYFITVSNIESTDP-AQVIDGNERVIRPRLADAAFFFETDKK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L+ R +L VVF AK+GT ++ RI L + IA + D + Sbjct: 338 ----------SSLEARREKLK--SVVFQAKLGTIYDKTQRITGLSQHIADKLSIDASNAV 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L K+DL + +V EFPE+QG G YA+ EN + AI E P+ + +P + Sbjct: 386 RAAQLCKSDLVSNMVYEFPEMQGIAGYSYALNDGENETVAQAIVEQYMPKFAGDTLPASD 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 V+LAD+LDT+ + I + P+GSKDP+ALRRA+LG +R+++E ++ L I Sbjct: 446 EGTIVALADRLDTITGIFGIGQTPTGSKDPFALRRASLGALRLLVEKGYELDLRDLITQA 505 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++++ + +R K + + +I ++ +A+ + L I + + + Sbjct: 506 AGQFSDLPKADSVVEDVLAYMLERFKAWYEEANIPSEVFQAVSAKQLSTPLDINNRVYAV 565 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 N F+S + + KR+ ILA K + E++ E+ L AE L + T Sbjct: 566 NSFYSLPQAAALASANKRVSNILA---KNDAEVAGEVDAALLTEAAEIALAKQVQKMQTA 622 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + + Y Q L + E ++ FFD V+V DD VR+NRL+LL ++ + L V + Sbjct: 623 VTPLLAERNYEQALTTLAGLREAVDSFFDDVMVMTDDLAVRNNRLALLSKLRELFLHVAD 682 Query: 698 VQKIV 702 + + Sbjct: 683 ISLLA 687 >gi|77456237|ref|YP_345742.1| glycyl-tRNA synthetase subunit beta [Pseudomonas fluorescens Pf0-1] gi|123772394|sp|Q3KKF3|SYGB_PSEPF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|77380240|gb|ABA71753.1| glycyl-tRNA synthetase beta chain [Pseudomonas fluorescens Pf0-1] Length = 684 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 204/723 (28%), Positives = 335/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + AE + L+ G+ Y++ Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKALNTLAEAFLAGIDKGLQAAGLNYESKTVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ ++ + + G Sbjct: 61 LATQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGV------ELSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW ++RP + ++ +L Sbjct: 115 SQNIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++IID + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQIIDCTILAQKAGRESRGHRFHHPQSVRIGSPSSYLADLRAAYVLADANERREIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TEELATRQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKDP-QQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF K+G+ ++ R+ L IA I + + Sbjct: 335 -----------QKLEAFNDRLQ--NVVFQEKLGSVYDKAERVSKLAAYIAARIGGNASWA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 ARAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPEDVALALNEQYMPRGAGAELPAT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ + Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLNDAVAF 501 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AVNAFGAKVKAAGLNDAVLEFIFDRLRARYEDEGVGVATYLSVRALKPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ K + E+ +Y E LY+ I Sbjct: 562 VQAFRKLPEAAALAAVNKRVSNLLS---KVEGSVPTEVQAKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y++ L ++ EP++ FFD V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYNESLARLAALREPVDAFFDAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|104779330|ref|YP_605828.1| glycyl-tRNA synthetase subunit beta [Pseudomonas entomophila L48] gi|166227918|sp|Q1IH28|SYGB_PSEE4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|95108317|emb|CAK13011.1| glycyl-tRNA synthetase, beta chain [Pseudomonas entomophila L48] Length = 684 Score = 757 bits (1954), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 339/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + + Y P RL + L+ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTSKQVYAAPRRLAVLLRQ 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP G +A GF + G++ Q G Sbjct: 61 LDVQQPDRSINIDGPPRQAAFDAEGNPTQAALGFAKKCGVELSDIDQ------SGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + +L TIV ++ +P PK M W + ++RP + ++ +L Sbjct: 115 SQHIPGKATASLLPTIVEDSLNDLPIPKRMHWGASRE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 GDQVVDCTILAQKAGRESRGHRFHHPENVVITTPANYVEDLRKAYVLADFAERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELAMQQEGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+N+++ D IV+GN +VV RL DA F+K+D+ Sbjct: 285 LLDSEGKLLPRFITVANVESRDP-KQIVEGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L IA I A Sbjct: 335 -----------QPLESFNERLK--NVVFQAQLGTVFDKAERVSKLAAFIAPYIGGSAANA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 GRAGLLSKCDLASEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTTAVEF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D I ++ + + L ++ Sbjct: 502 AVKQFGTKVKAAGLSEQVLEFIFDRLRARYEDEGIDVATYLSVRALKPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ +L K I+ ++ P+Y E LY+ I Sbjct: 562 VQAFRKLPEANALAAANKRVSNLL---GKAEGAIADQVEPKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y++ L ++ +P++ FF+ VLVN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMASARQYNEALARLAALRDPVDAFFEAVLVNAEDAKVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|302185849|ref|ZP_07262522.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae 642] Length = 684 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAAYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAKRS 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPDDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|325275347|ref|ZP_08141297.1| glycyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] gi|324099518|gb|EGB97414.1| glycyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] Length = 683 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 207/722 (28%), Positives = 343/722 (47%), Gaps = 65/722 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + L+ G+ Y + Y P RL + ++ Sbjct: 1 MSAQDFLVELGTEELPPKALASLGDAFLAGIEKGLQAAGLNYTGKQVYAAPRRLAVLIRQ 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P++ GP + G +A GF + G+ ++ + + G Sbjct: 61 LDVQQPDRSINIDGPPLQAAFKDGEPTQAALGFAKKCGV------ELAEIDQSGPKLRFS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + +L TIV ++ +P PK MRW+ + ++RP + ++ +L Sbjct: 115 QHIPGKATVGLLPTIVEDSLNDLPIPKRMRWAASRE-----EFVRPTQWLVMLL-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D + + GHRFH P + + + +Y+ DL +A VL D RR I Sbjct: 165 DQVVDCTILSQKADRESRGHRFHHPENVLITAPANYVEDLRKAYVLADFAERRELISKRT 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 AELAMQQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V+N+++ D IVQGN +VV RL DA F+K+D+ Sbjct: 285 LDSEGKLLPRFITVANVESRDP-KQIVQGNEKVVRPRLTDAEFFFKQDKK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +PL+ RL +VVF A++GT ++ R+ L IA LI D Sbjct: 334 ----------QPLETFNERLK--NVVFQAQLGTVYDKAERVSKLAAFIAPLIGGDAQRAG 381 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P Sbjct: 382 RAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTL 441 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L+ +E Sbjct: 442 TGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLTGAVEFA 501 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ F DRL+ D I ++ + + L ++ + Sbjct: 502 VKQFGAKVKAAGLAEQVLEFIFDRLRARYEDEGIDVATYLSVRALQPGSALDFDQRVQAV 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E KR+ +L+ E I+ ++ P+Y E LY+ I Sbjct: 562 QAFRKLPEAEALAAVNKRVSNLLSKAE---GAIAEQVEPKYFDNANEFSLYSAIQQADQA 618 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +Q ++Y + L ++ +P++ FF+ V+VN +D +VR NR +LL ++ + L V + Sbjct: 619 VQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVAD 678 Query: 698 VQ 699 + Sbjct: 679 IS 680 >gi|213968433|ref|ZP_03396576.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|301384279|ref|ZP_07232697.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato Max13] gi|302060159|ref|ZP_07251700.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato K40] gi|302130432|ref|ZP_07256422.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926721|gb|EEB60273.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|330876370|gb|EGH10519.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 684 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELASQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKVKPAGLAEQVLEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|90415373|ref|ZP_01223307.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2207] gi|90332696|gb|EAS47866.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2207] Length = 693 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 357/725 (49%), Gaps = 58/725 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFL+EI +EE+P ++ + +E ++ + LKE+ + + M + P RL + +K L Sbjct: 1 MSKDFLVEIGTEELPPKVLRQLSETVASGITQRLKEQQLGFNQMTAFAAPRRLAVLIKDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 +P++ GP + G KA + F R GL+ ++ ++ + D Sbjct: 61 DEQTPDQDIVSWGPPLKVAFDADGQPTKAAEAFARKNGLEVAVLAELVENDGQQDKLCVR 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 E +L ++ ++ +P PK MRW + ++RP++ + + Sbjct: 121 QSISGSNTEALLGEVINQSLAALPIPKPMRWGRSRQ-----EFVRPVQWAVVLF-----G 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + +D+ + GN + GHRFH+ I++ S Y L +A V++D RR I Sbjct: 171 NETVAIDILGVTSGNHSRGHRFHSTGDIQITSPASYRDTLLDAFVMVDFAERRELIRQGV 230 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A + V D+ LLEE+ L EW MG F++ +L +P E + ++ +QK F Sbjct: 231 MAAAKTANGQAVIDESLLEEVTSLNEWPVPLMGRFEEHFLEVPAEALVSSMAQHQKYFHV 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI V+NI ++D ++ GN RV+ RL DA F+ D Sbjct: 291 VDANNKLLPLFITVANIASADP-QQVINGNERVIRPRLADAAFFYNTD------------ 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L LD R R + +VF +K+GT ++ +R+ L K +A + ADV Sbjct: 338 --------LKTTLDAR--RETLRKIVFQSKLGTVYDKTARVSELAKILAPFVGADVTAAG 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSK+DL +E+V EF +LQG +G+ YA+ E+ + DA+ E PR + +P + Sbjct: 388 RAGELSKSDLVSEMVGEFDDLQGVMGRYYALNDGEDPAVADALLEQYLPRFAGDAIPASA 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 ++LAD+LDTL+ ++I ++PSGS+DP+ALRRA+LGI+RII+E IDI L I Sbjct: 448 TGAALALADRLDTLVGIFSIGQQPSGSRDPFALRRASLGILRIIIERNIDIDLKVAIAAA 507 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ + +RLK + D +I ++ ++ E N L I +K + Sbjct: 508 AQQLALTEVLDGNLEQVLTYVTERLKSWYRDENITPEVFASVAAMELSNPLDINARVKAV 567 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +EF + + + KR+ ILA + ++ ++ AE +L A I Sbjct: 568 DEFSRAVEAVALASANKRVLNILAKQ--GETKVEAKVDSTLFEDPAEIQLAAEIERLRLL 625 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 I ++ + Y + L ++ EP++ FFD VLV D+ EVR NRL+LL ++ + L V + Sbjct: 626 IAPLVEERNYMGVLAALATLREPVDTFFDGVLVMADNPEVRANRLALLHSLRQLFLNVAD 685 Query: 698 VQKIV 702 + +V Sbjct: 686 ISHLV 690 >gi|39995686|ref|NP_951637.1| glycyl-tRNA synthetase subunit beta [Geobacter sulfurreducens PCA] gi|81832117|sp|Q74FM7|SYGB_GEOSL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|39982449|gb|AAR33910.1| glycyl-tRNA synthetase, beta subunit [Geobacter sulfurreducens PCA] gi|298504697|gb|ADI83420.1| glycyl-tRNA synthetase, beta subunit [Geobacter sulfurreducens KN400] Length = 687 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 216/728 (29%), Positives = 341/728 (46%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LEI +EEIPA KA D+ I+ L+ + + ++ + TP RL L +KGL Sbjct: 1 MSKELFLEIGTEEIPAGFLPKAMADMEAIVTKELENARLAFGEVKTFATPRRLALVVKGL 60 Query: 60 SPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 P+ LGP G KA +GF R G+ S + + KG+ AV Sbjct: 61 PTVQPDAEITALGPARNIAFGPDGTPSKAAEGFARGQGVDVASLTLVSTE--KGEYVAAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ R + D+L I+P + +P+ KSMRW+ + RP+ I+ + Sbjct: 119 RKESGRPVPDLLAEILPRLVGGIPFRKSMRWADLD-----VRFARPIHWIVALFDG---- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + GN++ GHRF A P V+ HY+ + E V+ DPE R+ I + Sbjct: 170 -VVVPFAFGNVQSGNVSRGHRFMANQPFPVRDFAHYLDECERHFVIPDPERRKETIRREI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 HR+A G L+ D+ LL+E+ LVE+ V G+F +L +P E++ +++++Q+ F Sbjct: 229 HRVAKTAGGHLLPDEGLLDEVAYLVEYPSVVHGTFSPDFLKVPREVLITSMRSHQRYFSI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI ++N D + +V+GN RV+ ARL DA F++ DQ Sbjct: 289 VDDAGKLMPGFITINNTLTEDP-SVVVKGNERVLRARLSDARFFFEEDQKV--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 L+ R+ L +VV+ K+GT E++ R R L + +A L++ V A Sbjct: 339 -----------KLETRVESLK--NVVYQQKLGTSYEKMERFRALAEGLADLLNPAVKAKT 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L KADL + +V EFPE+QG +G+EYA+LQ E+ AI EH P ++P + Sbjct: 386 SRAAFLCKADLVSGMVGEFPEVQGIMGREYALLQGEDAEVAAAIAEHYLPTQAGGDLPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS----- 526 I VS+ADKLDT+ + + P+GS DPYALRR+ LGII IIL+ + L Sbjct: 446 DIGAFVSIADKLDTICGCFGVGLIPTGSADPYALRRSALGIINIILDRGCRLSLEGEIGK 505 Query: 527 ------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++ FF R + DR D ++A + D+L+ I Sbjct: 506 ALELLSAKLTRPAAEVMADVLEFFRGRFVNLMADR-YPADAVDAAIAAGFDDLVDAEARI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L F + ++ KR+ I+ + + AE L+A Sbjct: 565 GALAAFKGRPDFDSLAVAFKRVCNIVK------DGVDQPVDAALFQEPAEGALFAAFQQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ Y + ++ ++ FFD+V+V +D VR NRL+LL I + Sbjct: 619 RADVEARTASGDYLAALTGIAALKGAVDDFFDKVMVMAEDERVRTNRLALLTGIARLFGG 678 Query: 695 VINVQKIV 702 V + KI Sbjct: 679 VADFAKIA 686 >gi|330898600|gb|EGH30019.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. japonica str. M301072PT] Length = 684 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 332/723 (45%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLISA 60 Query: 59 LSPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP A +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADSNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELAAQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDGAGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLIETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKIKPAGLAEQVLEFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 IQ ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AIQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|114561194|ref|YP_748707.1| glycyl-tRNA synthetase subunit beta [Shewanella frigidimarina NCIMB 400] gi|122301220|sp|Q08A46|SYGB_SHEFN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114332487|gb|ABI69869.1| Glycine--tRNA ligase [Shewanella frigidimarina NCIMB 400] Length = 694 Score = 755 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 213/725 (29%), Positives = 338/725 (46%), Gaps = 66/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + AE L + + +++ Y P RL + + GL+ Sbjct: 5 NLLIEVGTEELPPKALRTLAESFLTSFTDELTKADLPFESAVWYAAPRRLAINVLGLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLVHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIADMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 + +L I I GHRF ++ D+Y+ L E+ VL D E R++ I DA Sbjct: 173 VAGELLGITSNRIIRGHRFMGKASFELDHADNYLAALKEQGKVLADYELRKSLIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKLGGIADIQDGLLEEVASLVEWPIVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ N Sbjct: 293 KAGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFNTDKKN----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-----IDADVA 409 L+ R+A L+ VVF ++GT RV RI L IA ++ + Sbjct: 341 ---------TLESRIASLET--VVFQKQLGTLKARVERISELAGFIATQMNNNGVETNSV 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP Sbjct: 390 DASRAGLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAIALEEQYKPKFSGDTVP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T +S V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+R+I+ENK+ + L + I Sbjct: 450 TATVSCAVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRVIVENKLPLDLVELI 509 Query: 530 EDQNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + F R + + D+ I+ D+I A+L + Sbjct: 510 AKAQALHATNITNTNTSDDVLEFLLARFRAWYQDKGIQVDVILAVLARRPTKPADFDSRV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++ F + KR+ ILA K E+ I+ L AEK L + Sbjct: 570 KAVSHFRGLEASTALAAANKRVSNILA---KVEGELPATINSALLTEPAEKALADKLVQL 626 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L Sbjct: 627 QPQLAPLFADGNYQQALTLLADLRENVDQFFEDVMVMADDEALKNNRLALLTNLREQFLH 686 Query: 695 VINVQ 699 V ++ Sbjct: 687 VADIS 691 >gi|260433231|ref|ZP_05787202.1| glycyl-tRNA synthetase, beta subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260417059|gb|EEX10318.1| glycyl-tRNA synthetase, beta subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 739 Score = 755 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 277/764 (36%), Positives = 402/764 (52%), Gaps = 90/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL + L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQTRAGEDLKKRITDGLVEAGLTYAHAHALTTPRRLTLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR G+ + +D KG VY A + KP R Sbjct: 61 AESPTIREERKGPKVGAPDKAIEGFLRGAGISRDQLEE--RDTPKGAVYFATIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + W+RPL SILCIL +++A +++ +++ Sbjct: 119 AEIVAEVLADTIRNFPWPKSMRWGSGQ-----LRWVRPLHSILCIL-SDEAGAQVVPMEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V + Y L+ A V+L PE R I NDA LA A G Sbjct: 173 DGITAGDTTEGHRFMAPGRFAVTGFEDYAAKLKRAFVVLSPEERAEHIWNDAQNLAFATG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG D ++L LP E+++ ++K +QK F R Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLMGQIDDEFLDLPPEVLQTSMKEHQKFFSVRNPNTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + + AL+ Sbjct: 293 ERFITVANRETTDNGATILAGNQKVLSARLADAKFFWENDLRVAKSDITQWTRALE---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+GTQ +R+ RI L +++A + AD ++A L+KA Sbjct: 349 ---------------NVTFHNKLGTQAQRIERIAALARELAPVTGADPDQAEKAARLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y E+ + +EH P GP ++VPT +S+TV+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYIEAAGEDAAVAAVAQEHYSPLGPSDDVPTAPLSVTVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI----------------- 523 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR+IL N + + Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLILNNDLRLKLGGILDAQLVRAEVAS 513 Query: 524 ------------------------------------PLSQFIEDQNLILFFHDRLKLYLH 547 LS + + + L + H Sbjct: 514 NDAVHDEHVADLLEEIAQHGVFGAAFRVVKEKLAGKHLSDILHMERKVPDATQDLLSFFH 573 Query: 548 DR--------DIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DR IRHD+I+A + ND++ +V + LN ++ GE + KR Sbjct: 574 DRLKVFLRDEGIRHDVIDACIAMDGNDDINLLVKRARALNVVIATEDGENLVQGFKRANN 633 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL E+K+ E S P++ ++EK L+A + + I ++ + + + ++ Sbjct: 634 ILTQAEEKDGVEYSFGADPKFAETDSEKALFAALDEAQAKIASALAAEDFPAAMAAMAAL 693 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN D+ +R NRL+LL I+ I V ++ KI Sbjct: 694 RGPIDAFFEDVQVNSDNPVLRRNRLNLLSQIRQICSSVADLTKI 737 >gi|269468521|gb|EEZ80175.1| glycyl-tRNA synthetase, beta subunit [uncultured SUP05 cluster bacterium] Length = 678 Score = 755 bits (1950), Expect = 0.0, Method: Composition-based stats. Identities = 216/714 (30%), Positives = 369/714 (51%), Gaps = 57/714 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+P ++ K + L+ L L E + + + + TP RL + ++ L Sbjct: 5 DFLLELGTEELPPKLLQKISNALTTNLTDQLSELKLSFGKVESFATPRRLAVLVRDLQLQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 ++ ER GP + A +A++GF +S G+ K K D Y + D Sbjct: 65 QDDQTVERKGPALSAPDQAVEGFAKSCGVSKQDLSH--KAFGKADYYFFTKEQKGLKTTD 122 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L+ +V AI+K+P K MRW F+++RP ++ +L +E I+ + Sbjct: 123 LLEDVVDTAIKKIPIAKPMRWGNLD-----FTFVRPTHWLVMMLGSE-----IVPATVMG 172 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 + GN T G RF + + Y + L + A + +D + R+ I ++AS Sbjct: 173 LSAGNTTKGLRFTGEQEFGIDNAADYQQTLFDRAQIEVDFDARKQIIRKQVMQVASKSKA 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 V D+ LL+E+ LVE+ F G FD+K+L +PEE + +K++QK F L Sbjct: 233 NAVIDESLLDEVCALVEYPCAFSGGFDQKFLSVPEEALISAMKSHQKYFHMVDDNEKLLP 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI V+NI++SD + I+ GN RV+ RL D+ FW++D+ Sbjct: 293 SFISVANIESSD-LSVIIDGNERVIRPRLSDSEFFWEKDK-------------------- 331 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 ++ L+ R+++L+ DV+F +G+ G++V RI L IA +I A+V RA +LSK+D Sbjct: 332 TESLESRLSKLN--DVLFMKLLGSMGDKVKRIESLSSYIAGVIGANVDYSARAGLLSKSD 389 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L +++V EF +LQG +G YA+ E+ S AI EH PR +++P+++ + V++AD Sbjct: 390 LVSDMVGEFADLQGVMGGYYALNDGEDESVSIAIREHYHPRFSGDSLPSSREGLVVAIAD 449 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL----- 536 KLDT+ + I + P+GSKDPYALRR LG++RI++E ++++ L I + Sbjct: 450 KLDTITGIYGIGQGPTGSKDPYALRRMALGLLRIMVEGQLNLDLKALIAQSLSLHSSKVD 509 Query: 537 ---------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 F DRL+ Y ++ + EA+L ++ ++ LN F ++ E Sbjct: 510 ASSADDIYQFMMDRLRAYYKEQKVSAKAFEAVLAVRPESPYDFHRRVEALNLFTQQSESE 569 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + S KRI IL K++ + ++ + +AEK LY +S+ + S Y Sbjct: 570 SLIESNKRIANIL----KEHDNLGTDVDTSVFVEDAEKALYEAVSNVAKDLSLSA---DY 622 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L + + I+ FFDQV+VN DD ++ +RL+LL +++++ L V ++ + Sbjct: 623 EQTMNKLLGLKDSIDSFFDQVMVNTDDEILKRSRLTLLNWVRSLFLSVADISYL 676 >gi|94502179|ref|ZP_01308676.1| Glycyl-tRNA synthetase, beta subunit [Oceanobacter sp. RED65] gi|94425682|gb|EAT10693.1| Glycyl-tRNA synthetase, beta subunit [Oceanobacter sp. RED65] Length = 689 Score = 755 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 213/724 (29%), Positives = 335/724 (46%), Gaps = 62/724 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+EI +EE+P + + L+ +G+ + N + P RL + L G Sbjct: 1 MSQHDFLVEIGTEELPPTALKSLRDAFQKGIETFLQAKGLSFANSEAFAAPRRLAVRLTG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 LS E+ GP V G KA +GF RS G+ +I +KG+ Sbjct: 61 LSAQGESSKSEKFGPYVNVAIGDDGKPTKAAEGFARSNGVNFEELDRI--TDEKGERLYF 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P D L + ++ K+P PK MRW S ++RP+ +L +L Sbjct: 119 ATEVPGAKAVDELPNAIRDSLNKLPIPKRMRWGA-----SRTEFVRPVHWVLTLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILN 230 K I+ D+ + T GHRFHA I + S Y L E+ VL + + R+ I Sbjct: 169 DNKSIEADILGVKTNYFTRGHRFHANKEITITSPSAYEATLKEQGKVLANYDERKEMIRQ 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A +G + V D+DLL+E+ L EW G+FDK++L +P E + ++K +QK F Sbjct: 229 QVLAEAEKLGGQAVIDEDLLDEVASLNEWPTALSGNFDKEFLQVPAEALVSSMKEHQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L FI + NI++ D +++GN RV+ RL DA FW D Sbjct: 289 HVLDKDGKLMPNFITICNIESKDP-QQVIEGNERVIRPRLADAKFFWDTD---------- 337 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L PLD R +LD V + ++G+ ++ R+ VL KIA I D Sbjct: 338 ----------LKTPLDSRFEKLD--SVRWVQQLGSLKDKSERLMVLASKIATAIGGDAEK 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +RA L K DL +E+V EF +LQG G+ YA E+ C A+EE P + +P Sbjct: 386 AERAAKLCKTDLLSEMVLEFSDLQGLAGRYYAQHDGEDPDVCAAMEEQYMPAFAGDALPQ 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + ++LAD+LD+L+ + I + P+G KDP+ALRRA+LG++R+I+EN + + L++ I+ Sbjct: 446 TQTGLALALADRLDSLVGLFGIGQIPTGGKDPFALRRASLGVLRLIVENNLKLDLNELID 505 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 LI + DR + D +I + +A+ I + Sbjct: 506 WAMDNNWPCDLDADNKSKLIDYMLDRFSAWYQDENIPSVVFQAVRAKGITQPYDINQRVM 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 ++ F E + KR+ IL+ + ++ L AEK L + Sbjct: 566 AVHAFSQLESAEALAAANKRVSNILSKNDAFMDNA--KVDNNLLSDAAEKALAESLDKQM 623 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + Y Q L + + I+ FFD+V+V DD V+ NRLSLL ++N+ L V Sbjct: 624 QSATPLFEKGEYAQYLTQLTELRQSIDTFFDEVMVMADDEAVKQNRLSLLNQLRNLFLNV 683 Query: 696 INVQ 699 ++ Sbjct: 684 ADIS 687 >gi|95929742|ref|ZP_01312483.1| Glycine--tRNA ligase [Desulfuromonas acetoxidans DSM 684] gi|95134038|gb|EAT15696.1| Glycine--tRNA ligase [Desulfuromonas acetoxidans DSM 684] Length = 688 Score = 755 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 205/728 (28%), Positives = 338/728 (46%), Gaps = 67/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LEI +EEIPA M A DL ++ L V + ++ Y TP RL L + + Sbjct: 1 MAKELFLEIGTEEIPAGMLPVAMRDLERMMRKELTNARVAFGDVTTYATPRRLVLSVADV 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + GP V G KA GF RS G+ +++ +KG Sbjct: 61 AEEQERQELNLSGPSVKVAFDADGNPTKAALGFARSNGVDVSE--LTQQETEKGTYLFLS 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + I++ L I+ + + + KSMRW + RP+ ++ + E Sbjct: 119 KVIEGQPIKEQLPEIMERIVSSLSFKKSMRWKDLD-----VRFARPVHWLIALFGGE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + GN +YGHRF AP V LD ++ E V++DPE R+ I + Sbjct: 171 --VIPFSWGNLTSGNTSYGHRFMAPAGFDVTGLDDFVAKAREHFVIVDPEERKQIIAREI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A G L D+DLLEE+ LVE GSF++++L LP+EL+ ++K +Q+ F Sbjct: 229 ERVAGEEGGALNVDEDLLEEVAYLVEDPTPLCGSFEEEFLQLPDELLITSMKEHQRYFTL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI +SN + +D +V+GN RV+ ARL DA+ FWK DQ Sbjct: 289 ADTEGRLLPKFITISNTRPTDP-DVVVKGNERVLRARLSDAMFFWKEDQK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 PL+ R+ L +VV+ A++GT +V R L + +A D++ V L Sbjct: 338 ----------TPLENRLEALK--NVVYQAQLGTSYAKVQRFTALAEDLASQFDSEVVELT 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L K DL T +V EFPELQG +G+EYA ++ E+ AI EH P ++P++ Sbjct: 386 RRAAQLCKCDLETGMVYEFPELQGVMGREYAAIEGEDPRVAKAIFEHYLPVQAGGDLPSD 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + VS+ADK+DT+ + + P+G+ DPYALRR +G++ I+L+ + + + + Sbjct: 446 NVGAFVSIADKIDTICGCFGVGLIPTGTADPYALRRCAIGVLNILLDRGFTVSIPELVAK 505 Query: 532 -----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++ F R + + D++EA+L DN++ I Sbjct: 506 AVKQLEDKLNRSVEEVTADVVEFIRLRFVNMMTGPETATDVVEAVLAARFDNVMDARQRI 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+ + E + KR+ I+ ++ + + + E+ +Y + Sbjct: 566 EALSAMKQQPEFEALAATFKRVGNIIK------GGVTDAVDAECFEQDCEREMYGALQQV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + M Y + S+ ++ FFD V+V +D V+ NRL+LL + + Sbjct: 620 QQDVARLMADGDYPGALRAIGSLRPAVDAFFDGVMVMAEDEAVKRNRLALLTQVAGLFAG 679 Query: 695 VINVQKIV 702 + + +I Sbjct: 680 LADFSRIA 687 >gi|28867425|ref|NP_790044.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato str. DC3000] gi|38258482|sp|Q88B35|SYGB_PSESM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28850659|gb|AAO53739.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] Length = 684 Score = 755 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAANVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELASQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKVKPAGLAEQVLEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|330965130|gb|EGH65390.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. actinidiae str. M302091] Length = 684 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 204/723 (28%), Positives = 332/723 (45%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVFLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDAGGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELASQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKDPTQ-IIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKVKPAGLAEQVVEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|147677235|ref|YP_001211450.1| glycyl-tRNA synthetase, beta subunit [Pelotomaculum thermopropionicum SI] gi|146273332|dbj|BAF59081.1| glycyl-tRNA synthetase, beta subunit [Pelotomaculum thermopropionicum SI] Length = 698 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 215/729 (29%), Positives = 342/729 (46%), Gaps = 70/729 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+LLEI EE+PAR A +L I + L E+ + + + + TP RL LY++GL+ H Sbjct: 7 DYLLEIGVEELPARFLDPALAELKEISVRALAEKRLSCKKVETFGTPRRLALYVEGLAEH 66 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E GP V G +A +GF RS G+ ++K + AV R+ Sbjct: 67 QEPLETEVKGPAVKVAFKPDGTPTRAAEGFARSQGVAVSG--LVRKFVGHVEYVFAVKRE 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL I P I + +PK MRW + RP++ I+ + +++ Sbjct: 125 EGRPAREVLSEIAPALIDGLHFPKPMRWGNLE-----VRFARPIRWIVSLF-----GDEV 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + + G T GHRF + P+ + Y + V++D RR I L Sbjct: 175 VEFEYAGLKAGRTTCGHRFLSKEPVVLAFSSEYFEKMRSNYVIVDTAERRQLIRRQVQEL 234 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ G ED+DLL E+ LVE+ +G F YL LP E++ ++ +Q+ F + Sbjct: 235 AASAGGRAEEDEDLLNEVSNLVEYPTALVGEFSPDYLNLPREVLVTPMREHQRYFPVVSP 294 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N A D I G +V+ ARL DA F++ D Sbjct: 295 DGGLLPKFIAVKNG-APDHLDIIRSGYEKVLRARLADANFFFQED--------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVD 412 L PL ++ L V+F +GT ++V R+ L +A ++ A + + Sbjct: 339 -----LKTPLAGKVPALK--KVIFQESLGTVYDKVERLGALAGYLAGVMGAGRQEKEVAL 391 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+KADL T +V EFPELQG +G+EYA+ E+ +A+ EH PR + +P Sbjct: 392 RAAYLAKADLVTSMVYEFPELQGIMGREYALRSGESREVAEAVFEHYLPRFAGDRLPETL 451 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 +S+ADK+D ++ +AI +PSGS+DPYALRR LGI IILE + + L + +E Sbjct: 452 PGKILSIADKIDNIVGCFAIGIQPSGSQDPYALRRQALGISHIILEGQAALSLRELVETA 511 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ FF RL+ L R +D +EA+L D+ + Sbjct: 512 YRGYEGKVELKCSLEKVTADVGEFFEQRLRSILGARGFSYDTVEAVLASGCDDFADTLLR 571 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L F L R + +++P L +EK L ++ Sbjct: 572 AQALAGFRRDPAFGDLLTVFVRANNLARNA------FPGQVNPALLEDASEKELNRRLAG 625 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + ++ K Y + + ++ +P+E FF+ V+V V+DREVR+NRL+LL + ++ Sbjct: 626 VQEEAKRHLEKKDYRSLLAGIATLQKPLEEFFNSVMVMVEDREVRENRLTLLANLAGLVR 685 Query: 694 IVINVQKIV 702 V ++ KIV Sbjct: 686 QVADLSKIV 694 >gi|134300311|ref|YP_001113807.1| glycine--tRNA ligase [Desulfotomaculum reducens MI-1] gi|238685553|sp|A4J7C9|SYGB_DESRM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|134053011|gb|ABO50982.1| glycyl-tRNA synthetase beta chain [Desulfotomaculum reducens MI-1] Length = 695 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 213/732 (29%), Positives = 351/732 (47%), Gaps = 71/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLE+ EE+PAR A L + L+E + Y +++ Y TP RL LY+K L Sbjct: 1 MAKDFLLEVGIEEMPARFLGPALTQLKEQTVKTLQELRIEYADIQTYGTPRRLVLYIKDL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + +E GP G KAI GF RS G+ + + + + A+ Sbjct: 61 AENQAALEKEVKGPAKKAAFDAAGNPTKAILGFTRSQGVSMED--LVVRSIGQVEYLYAL 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R+ R VL I P I + +PK MRW + RP++ +L + Sbjct: 119 KREEGRPTAQVLAEICPGLIAGLHFPKPMRWGELE-----LRFARPIRWLLALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E ++ +L + TYGHRF + + + + + Y + A VL+DP R+ I Sbjct: 169 EAVVPFELANLQSNRFTYGHRFLSTGDLSIANPEDYFTKIRGAYVLIDPAERKELIWQQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+A G + +D+DLL+EI ++EW G+FD+ YL LP ++ ++ +Q+ F Sbjct: 229 QELATAEGGVVEKDEDLLDEITNILEWPTALCGTFDEDYLKLPGAVLVTPMREHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + EG L N FI V N + GN +V+ ARL DA F++ D Sbjct: 289 VSNEGKLLNKFIAVRNG-TRAYIEIVTAGNEKVLRARLADAAFFFEED------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-- 410 L +PL ++ L VVF +G+ ++V RI + +A+ + A+ Sbjct: 336 --------LKQPLASKVNGLQ--KVVFLEGLGSIADKVDRIGAMADHLAETLGANEEQRE 385 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R +L+KADL T +V EFPELQG++G+EYA+ E +AI EH PR + +P Sbjct: 386 NIQRGALLAKADLITNMVYEFPELQGEMGREYALRNGEAPEVAEAIFEHYLPRFAGDLLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +S+ADK+D+++ +AI +P+GS+DPYALRR LGI +++E I + L + + Sbjct: 446 ETLAGSVLSVADKMDSIVGCFAIGIQPTGSQDPYALRRQALGICHMLIEGNIHLSLRELV 505 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + FF RLK L+DR + +D ++A+L D++ + Sbjct: 506 QWAYQGYHEGVELKQDLNQVITEIEEFFKQRLKGILNDRGLSYDTVDAVLTAGFDDIADV 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 VD L F + + R + + ++ +L AE+ LY + Sbjct: 566 VDRGMALAAFRELPAFAALMTAFNRANNLAKHA------TTTQVQEVHLEHSAEQELYGL 619 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 ++ ++ ++ K Y + +I P++ FF+ V+V V+D V+ NRL+LL+ + Sbjct: 620 LTKLEGEVRPLLEQKNYALALQKIATIQSPLDTFFESVMVMVEDEAVKTNRLALLKKLVG 679 Query: 691 IILIVINVQKIV 702 + + V + KIV Sbjct: 680 LSMNVADFSKIV 691 >gi|189424088|ref|YP_001951265.1| glycyl-tRNA synthetase subunit beta [Geobacter lovleyi SZ] gi|238692124|sp|B3E621|SYGB_GEOLS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|189420347|gb|ACD94745.1| glycyl-tRNA synthetase, beta subunit [Geobacter lovleyi SZ] Length = 687 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 213/728 (29%), Positives = 345/728 (47%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EEIPA KA L ++ L+ + + + TP RL L++KGL Sbjct: 1 MSKELLLEIGAEEIPAGFVPKALASLEEMIRKELETARLCFDAIVTMGTPRRLTLHIKGL 60 Query: 60 SPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 P+ +GP A KA +GF R G+ + I D KG+ Sbjct: 61 PVIQPDAELTAMGPSKKAAFDADGKPTKAAEGFARGQGVDVSALQVISTD--KGEYLAVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ R ++L I+P + +P+ KSMRW+ + RP+ I+ + Sbjct: 119 RQETGRPTHELLAEILPRLVAGIPFKKSMRWADLD-----IRFARPVHWIVALFDGI--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ I GNI+ GHRF A V+ HY+ + E V++D E R+ I + Sbjct: 171 --VVPFSFGPIQSGNISRGHRFMANSTFPVRDFAHYLDECERHFVIVDQERRKETIRKET 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 HR+A G L+ D+ LLEE+ LVE+ +GS ++L +P+E++ +++++Q+ F Sbjct: 229 HRVAKTTGGHLLPDESLLEEVTYLVEYPSAIIGSIPAEFLVVPKEVLITSMRSHQRYFSV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI + N A D A +V+GN RV+ ARL DA F+ D+ Sbjct: 289 VDENGKLLPYFITIPNTLAEDP-AVVVRGNERVLRARLSDARFFFDEDRKL--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 L+ R+ L VV+ K+GT E++ R R L +++A+ ++ A Sbjct: 339 -----------RLESRVESLK--SVVYQQKLGTSYEKMERFRALAEQLAEQLNPAAKQQA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 R L KADL + +V EFPE+QG +G+EYA+ E + +AI EH P ++P + Sbjct: 386 ARTAFLCKADLVSGMVGEFPEVQGIMGREYALHDGEETAVANAIAEHYLPTQAGGDLPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I VSLADKLDTL + + P+G+ DPYALRRAT+G+I IIL+ + LS I+ Sbjct: 446 DIGAFVSLADKLDTLCGCFGVGLIPTGAADPYALRRATIGMISIILDKGYSLSLSGLIDK 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++ FF R L D++EA + D+L + I Sbjct: 506 SLELLAAKLTRPRDEVRHDVLEFFRGRFVN-LQGNAYPADVVEAAMAAGFDDLADCAERI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L+ F + ++ KR+ I+ I ++P EAE LY V+ + Sbjct: 565 RALDTFRQRDDFQPLTVAFKRVCNIIKEG------IDAPVAPALFQDEAEHTLYRVLQET 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++Y + + + ++ FFD V+V +D VR+NRL+LL I + Sbjct: 619 KLSASDKIQQQQYLEALTDIAGLKWAVDAFFDAVMVMAEDSAVRNNRLALLTTINRLFSR 678 Query: 695 VINVQKIV 702 + + ++ Sbjct: 679 IADFGRLA 686 >gi|83311749|ref|YP_422013.1| glycyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|123541640|sp|Q2W3X1|SYGB_MAGMM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|82946590|dbj|BAE51454.1| Glycyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 688 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 280/720 (38%), Positives = 408/720 (56%), Gaps = 53/720 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI+SEEIPARMQ +AA+DL ++ L + G+ + R Y TP RL L ++GL Sbjct: 1 MAEFLLEIFSEEIPARMQARAADDLRGMVSDGLAKNGITFDAARSYVTPRRLVLVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRV + +A++GFL+STG+ Q +D KG Y AV+ + R Sbjct: 61 LAGPDVSEEKRGPRVSSPAQAMEGFLKSTGMTVEQLEQ--RDTGKGVFYFAVINRKGRPT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL+ + A+ PWPKS RW + W+RP++SIL + I+ + Sbjct: 119 AEVLREVTEGAMATFPWPKSQRWGAN-----SIRWVRPIQSILALFDGS-----IVPVAF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 G++T GHRF AP P +V+ Y+ L A V+LDP RR+AIL A LA+A G Sbjct: 169 GPATAGDMTAGHRFLAPEPFRVKDFADYLSKLRHAKVMLDPVERRHAILAGAEGLAAAEG 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L+L D LL E+ GLVEW +GS D K++ +P E++ +++ +QK F +G LA Sbjct: 229 LQLKADDGLLAEVTGLVEWPVPLVGSIDDKFMDVPAEVLITSMRAHQKYFSLLKADGSLA 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI++SN++ DGG A+V GN RV+ ARL DA FW D+ Sbjct: 289 PRFIVISNMETDDGGKAVVAGNQRVLRARLSDAKFFWDTDRK------------------ 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L+ R+ +L F+A +GT ++V RI L IA +I AD A+ +RA L+KA Sbjct: 331 --QRLEARLPKLAER--TFYASLGTVADKVDRISALAGNIAGMIGADRAVAERAARLAKA 386 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G+ YA+ E DAI H P+GP ++ PT +S+ V+LA Sbjct: 387 DLSTELVGEFPELQGLMGRYYALNDGETPEVADAIAAHYSPQGPGDSCPTAPVSVAVALA 446 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DK+D+L+ F+AINEKP+GSKDP+ALRRA LGIIR++LEN + +PLSQ I Sbjct: 447 DKIDSLVGFFAINEKPTGSKDPFALRRAALGIIRLVLENGLRLPLSQVIFLASGHYKANL 506 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRL + L ++ +RHDLI AI D+L+ ++ ++ L F Sbjct: 507 VNSPGEVANDLLNFFADRLAVALKEKGVRHDLITAIFSLGGEDDLVRLLKRVEALGAFLD 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G L++ +R I+ IEEKK+ I S Q L + EK L +SD G + + Sbjct: 567 SDDGANLLIAYRRAANIVRIEEKKDGTIFSGYADIQLLRQDEEKALEHALSDVGQAVSNA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + P++ FFD+V VN D+ +R NRL LL I + + + + K+ Sbjct: 627 LVTEDFAAAMAALARLRRPVDAFFDKVTVNADEAPLRVNRLKLLAMIGSAMGRLADFSKV 686 >gi|90581119|ref|ZP_01236918.1| glycyl-tRNA synthetase beta subunit [Vibrio angustum S14] gi|90437640|gb|EAS62832.1| glycyl-tRNA synthetase beta subunit [Vibrio angustum S14] Length = 689 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 218/721 (30%), Positives = 341/721 (47%), Gaps = 62/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +EE+P AE + LK + + ++ Y P RL L + GL+ Sbjct: 4 KNFLIELGTEELPPTALRTLAEAFATNFEAELKAADLPHDGIKWYAAPRRLALKVTGLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 64 NQPDKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGITVDQAERMVTD--KGEWLLFKQE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + +L + A+ K+P P+ MRW + +IRP+K++ +L ++ Sbjct: 122 VKGQPAQTLLPELAAAALAKLPIPRPMRWGDKET-----QFIRPVKTLTMLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ + + GHRF + + D Y LEE V+ D E R+ IL DA Sbjct: 172 LIEGTILGVASARTIRGHRFMGEAEFTIDNADQYPAILEERGKVMADYEARKAIILADAK 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A AVG + DL+EE+ LVEW V SF++++L +P E + T+K +QK F Sbjct: 232 KAAEAVGGIADLEDDLVEEVTSLVEWPVVLTASFEEEFLKVPSEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI VSNI ++D + I+ GN +VV RL DA F Sbjct: 292 DAEGKLVPKFIFVSNIISNDP-SQIISGNEKVVRPRLADAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN DL L R+ +L+ +F ++GT ++ RI L IA I ADV R Sbjct: 334 ---FNTDLKSKLIDRLPQLETA--IFQKQLGTIKDKTDRITELAGYIADKIGADVDNAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 389 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEDVALALNEQYMPRFAGDQLPSTPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN D+ L + + Sbjct: 449 SSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYDLDLVDLVAKAH 507 Query: 534 LI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + F R + + D D+I+A+L +K ++ Sbjct: 508 SLFGDKLTNNNVDSDVIEFMLGRFRAWYQDAGFSIDVIQAVLAMHPTQPADFDKRVKAVS 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F E + KR+ ILA K + E+ + L+ AEK L +S + Sbjct: 568 HFRELDAAESLAAANKRVGNILA---KFDGELPTTVDNSLLVEAAEKELAEKVSAVVAAL 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L S+ EP++ FFD V+V DD +++ NRL+LL ++N L V ++ Sbjct: 625 EPVFATGDYQTALTELASLREPVDAFFDNVMVMADDEKLKVNRLALLNLLRNQFLKVADI 684 Query: 699 Q 699 Sbjct: 685 S 685 >gi|331017695|gb|EGH97751.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 684 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 333/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLAGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPEDVRISSPAGYLSDLRAANVLADFNERRQIISRR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LAS + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEELASHQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D A I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDADGKLLPRFITVANIESKDP-AQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEAEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVTQFGAKVKPAGLAEQVLEFIFDRLRARYEDEGVEVAVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E I+ + P+Y E LY+ I Sbjct: 562 VQAFRKLPQAAALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V Sbjct: 619 AVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|118581462|ref|YP_902712.1| glycyl-tRNA synthetase subunit beta [Pelobacter propionicus DSM 2379] gi|118504172|gb|ABL00655.1| glycyl-tRNA synthetase beta chain [Pelobacter propionicus DSM 2379] Length = 687 Score = 753 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 211/726 (29%), Positives = 345/726 (47%), Gaps = 67/726 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LEI +EEIPA +A ++ ++ L + Y ++ TP RL L +K + Sbjct: 4 KELFLEIGTEEIPAGFIPRAMAEMEAMITRELTNARLSYSTVQTMATPRRLALVVKDIPA 63 Query: 62 HSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ GP A KA +GF R G+ + D KG+ Sbjct: 64 VQPDAEITATGPSKKAAFDADGKPTKAAEGFARGQGVTVDQLQIVTTD--KGEYLAVTKT 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L I+P I +P+ KSMRW + RP+ I+ + Sbjct: 122 ETGRPTPELLSEILPAMIASIPFKKSMRWGDLD-----VRFARPIHWIVALFDGI----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I G+++ GHRF A V++ HY+ + E V++DPE R+ I ++HR Sbjct: 172 VVPFVFGNIESGSVSRGHRFMANTSFPVRNFSHYLDECERHFVIVDPERRKELIRRESHR 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+A G L+ D++LLE+I LVE+ G+F +++L +P+E++ +++++Q+ F Sbjct: 232 VAAAAGGHLLPDEELLEQITYLVEYPSAVHGTFSREFLKVPKEVLITSMRSHQRYFSIVD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI ++N D G +V+GN RV+ ARL DA F++ DQ Sbjct: 292 GQGNLMPGFITINNTLTDDPG-VVVKGNERVLRARLSDARFFFEEDQKV----------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDR 413 LD+R+ L VV+ K+GT E++ R R L +++A ++ V R Sbjct: 340 ---------KLDERVEELK--KVVYQQKLGTSFEKMERFRALAEELADRLNPAVKSETSR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL + +V EFPE+QG +G+EYA+L+ E+ AI EH P +P + I Sbjct: 389 AAWLCKADLVSGMVGEFPEVQGIMGREYALLEGESGDVACAIAEHYLPIQAGGELPASDI 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 VS+ADKLDT+ +++ P+G+ DPYALRRAT+GII IIL+ + L+ I+ Sbjct: 449 GAFVSIADKLDTICGCFSVGLIPTGAADPYALRRATIGIIAIILDRGYRLGLASLIDRSL 508 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ FF R L D +EA + E D+L+ + + Sbjct: 509 DLLEAKLLRPKEQVATEVLEFFRGRFVNLLGGE-FDADAVEAAVSAEFDDLVDVKSRVAA 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L +F S E ++ KRI I+ + P AE LY + Sbjct: 568 LAQFKSHPDFEPLAVAFKRIGNIIK------GGTDALVDPSLFQDAAEGALYQAFHEVKV 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 H+ ++ + + + P++ FFD+V+V +D+ VR NRL+LL I + + Sbjct: 622 HVSALVEQGAWQDALTRIAGLRAPVDGFFDKVMVMAEDQRVRSNRLALLTAIDRMFGRIA 681 Query: 697 NVQKIV 702 + +I Sbjct: 682 DFSRIA 687 >gi|146305055|ref|YP_001185520.1| glycyl-tRNA synthetase subunit beta [Pseudomonas mendocina ymp] gi|166227919|sp|A4XN72|SYGB_PSEMY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145573256|gb|ABP82788.1| glycyl-tRNA synthetase beta chain [Pseudomonas mendocina ymp] Length = 684 Score = 753 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 209/720 (29%), Positives = 341/720 (47%), Gaps = 64/720 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + + LK G+ Y R Y P RL + ++ L Sbjct: 4 KDFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLNYAASRVYAAPRRLAVLVEQLEE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ GP + G +A GF R G+ I + + G Sbjct: 64 QQADRSMNLDGPPIQAAFDADGNPTQAALGFARKCGVD------IAEIDRSGAKLRFAQH 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + ++L TIV ++ +P PK MRW+ ++RP + ++ + + Sbjct: 118 IPGQPAVNLLPTIVQDSLNDLPIPKRMRWAARRD-----EFVRPTQWLVMLF-----GDA 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++D ++ G ++ GHRFHA +++ S +Y DL A VL D RR I Sbjct: 168 VVDCEILAQKAGRVSRGHRFHANREVRISSPANYAEDLRSAYVLADFAERREIISRRVDE 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+A + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 228 LAAAEQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFCLLD 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 288 AGGKLLPRFITVANIESKDP-AQIVSGNEKVVRPRLTDAEFFFKQDKK------------ 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ RL +VVF A++G+ ++ R+ L IA+ + D A RA Sbjct: 335 --------QKLEGFNQRL--ANVVFQAQLGSVFDKAQRVSALAGFIAREVGGDEARAARA 384 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P+ Sbjct: 385 GLLSKCDLATEMVGEFPEMQGIAGYYYALNDGEPQDVALALNEQYMPRGAGAELPSTLTG 444 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E +D+ L+ ++ Sbjct: 445 AAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDFAVA 504 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ F DRL+ D I + +A+ + L ++ + Sbjct: 505 QYAGKVKSDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQAVQA 564 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ +L+ E ++ ++ Y +E L+A I +Q Sbjct: 565 FRKLPQAEALAAANKRVSNLLSKAE---GGVAAQVEAHYFDNPSEFALHAAIQQADQAVQ 621 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++Y++ L S+ EP++ FF+ VLVN +D VR NR +LL ++ + L V ++ Sbjct: 622 PLAAARQYNEALAKLASLREPVDAFFEAVLVNAEDARVRANRYALLARLRGLFLGVADIS 681 >gi|89055222|ref|YP_510673.1| glycyl-tRNA synthetase subunit beta [Jannaschia sp. CCS1] gi|88864771|gb|ABD55648.1| glycyl-tRNA synthetase beta chain [Jannaschia sp. CCS1] Length = 739 Score = 753 bits (1945), Expect = 0.0, Method: Composition-based stats. Identities = 275/764 (35%), Positives = 399/764 (52%), Gaps = 90/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +A+ D+ ++ L E G+ Y + + TP RL L ++GL+ Sbjct: 1 MPDLLLELFSEEIPARMQARASADVKRLVTDGLVEAGLTYASAGSFVTPRRLVLTVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +SP E+R GP+VGA KA++GFLR G+ + ++ KKG Y A + R Sbjct: 61 DNSPTTTEDRRGPKVGAPDKALEGFLRGAGVAREDLEE--REDKKGTFYYAKVTSEGRAT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++P ++ PWPKSMRW T + W+RPL+SILC+L ED + +++ D+ Sbjct: 119 SDIIADLIPQIVRNFPWPKSMRWGTG-----SLRWVRPLQSILCLLTREDGSD-VVNFDV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP V S D Y L A V+L P+ R +AI +DA +A A G Sbjct: 173 DGIASGNTTEGHRFMAPGRFSVSSFDDYSAKLRAAKVVLSPQDRSDAIWHDATNMAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG + +L LP E+++ +++ +QK F R Sbjct: 233 LEVVEDAGLLTEVAGLVEWPVVLMGEIAEGFLGLPAEVLQTSMREHQKFFSVRNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GNS+V++ARL D FW D + AL+ Sbjct: 293 ERFITVANRETADEGATILAGNSKVLSARLADGKFFWDNDLRIARDGMGAWRKALE---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V F ++G+Q ERV RI L +IA ++ AD + A ++KA Sbjct: 349 ---------------NVTFERRLGSQAERVERIATLALEIAPMVGADPTAAETAARIAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +GK YA+ + + E+H P GP +NVPT +SI V+LA Sbjct: 394 DLSSEMVYEFPELQGTMGKYYALEAGLDPAIAAVAEDHYAPLGPTDNVPTAPLSIAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL---- 536 DKLD L FWAI+EKP+GSKDP+ALRRA LG+IRI+L+ + + L + + Q ++ Sbjct: 454 DKLDLLTGFWAIDEKPTGSKDPFALRRAALGVIRIVLDGGLRVRLDRLFDMQLVVHKGAI 513 Query: 537 ----------------------------------------FFH---------DRLKLYLH 547 F D L + H Sbjct: 514 IDPIDRDEVAELVREIANHGVFGAAWKAVKESRGGLPSSGFIEMKEQVPDKSDDLLAFFH 573 Query: 548 DR--------DIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQ 598 DR +IRHD+I+A L P ND+L +V + L F + GE + KR Sbjct: 574 DRLKVHLKAENIRHDVIDAALSMPSNDDLSLVVARARALQAFLDTPDGENLIQGYKRSAN 633 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 ILA E K+ E +Y + E+ L+ + T I ++ +R+ + + + Sbjct: 634 ILAQAEAKDGVEYRYGADVKYAETDEERALFTALDVARTAIAPALAEERFEEAMTEMAKL 693 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN D+ VR NRL+LL I V ++ +I Sbjct: 694 RAPIDAFFEAVQVNADNDIVRRNRLNLLNDIAQTCGAVADLTRI 737 >gi|254291119|ref|ZP_04961916.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae AM-19226] gi|150422964|gb|EDN14914.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae AM-19226] Length = 688 Score = 753 bits (1944), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASSRTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|262172786|ref|ZP_06040464.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus MB-451] gi|261893862|gb|EEY39848.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus MB-451] Length = 688 Score = 752 bits (1943), Expect = 0.0, Method: Composition-based stats. Identities = 202/723 (27%), Positives = 336/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGRE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + I GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVKSDRIVRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAKQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNTNVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|331006049|ref|ZP_08329387.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC1989] gi|330420135|gb|EGG94463.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC1989] Length = 691 Score = 752 bits (1943), Expect = 0.0, Method: Composition-based stats. Identities = 204/726 (28%), Positives = 345/726 (47%), Gaps = 63/726 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFL+E+ +EE+P + K + + + L EG+ + + Y TP RL + + GL Sbjct: 1 MSQDFLVELGTEELPPKALLKLSTAFTAGIKAGLSAEGLSFSEISPYATPRRLAVVVSGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +P E GP V G KA + F + G+ + + K D + Sbjct: 61 AESTPVNDVEIWGPPVKVAFDAEGNPSKAAEAFAKKNGIAITD--LVTANDGKMDKLVFR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L+ IV ++ K+P K MRW S ++RP+ ++ + Sbjct: 119 TQAGGVQTTSLLEGIVNNSLAKLPIAKRMRWGA-----SRTEFVRPVHWLVMLF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 I+D + + +T GHRFH + + + Y L + A V+ D R+ I Sbjct: 169 NDIVDATVLGLSANRLTRGHRFHYNQTLDIANASEYASKLNDIAYVVADFAQRKQLIEQQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A VG V LL+E+ GLVEW G F++++L +P E + ++K +QK F Sbjct: 229 VIAEAKKVGGTAVIGSGLLDEVAGLVEWPVALTGRFEERFLSVPAEALISSMKEHQKYFH 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI VSNI+++D A ++ GN RV+ RL DA F+ D+ Sbjct: 289 VVDEKGELLPYFITVSNIESTDP-AQVIDGNERVIRPRLSDAAFFFDTDKK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L + +L VVF AK+GT E+ RI L + IA+ + +V Sbjct: 339 -----------TTLASKREQLK--KVVFQAKLGTVYEKTQRIANLSRAIAEKLSVNVDTA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L K DL +E+V EF ++QG G YAV E A+ EH PR + +P+N Sbjct: 386 VRAGELCKCDLVSEMVYEFADMQGIAGYHYAVHDGEASDVALAMNEHYMPRFAGDVLPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V+LAD+LDTL+ + I E+P+GSKDP+ALRRA++ ++R+++E + +I L + Sbjct: 446 DVSAVVALADRLDTLVGIFGIGEQPTGSKDPFALRRASVAVLRLLVEQQRNIDLRDLLTL 505 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ + DR + + ++ I + +A+ + L I ++ Sbjct: 506 AFQQHNNLAEGQAVIEQVLSYMLDRFRAWYEEQSIPATVFQAVSAKQLSQPLDIDQRVQA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 +N F + E + KR+ ILA + + ++ L +AEK LYA + + Sbjct: 566 VNFFRQLPEAEALAAANKRVANILAKAD----SVPDSVNVDSLQEDAEKALYAAVVEQQK 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ ++Y + L S+ E ++ FFDQV+V DD +++NRL+LLQ ++ + Sbjct: 622 VVEPLFAQRQYKEALTALASLREVVDTFFDQVMVMADDEALKNNRLALLQQLRGLFFETA 681 Query: 697 NVQKIV 702 ++ + Sbjct: 682 DISCLA 687 >gi|258626089|ref|ZP_05720940.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM603] gi|258581615|gb|EEW06513.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM603] Length = 688 Score = 752 bits (1943), Expect = 0.0, Method: Composition-based stats. Identities = 202/723 (27%), Positives = 337/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + I GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVKSDRIVRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAKQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDANKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLTRNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|148654007|ref|YP_001281100.1| glycyl-tRNA synthetase subunit beta [Psychrobacter sp. PRwf-1] gi|148573091|gb|ABQ95150.1| Glycine--tRNA ligase [Psychrobacter sp. PRwf-1] Length = 697 Score = 752 bits (1941), Expect = 0.0, Method: Composition-based stats. Identities = 219/733 (29%), Positives = 356/733 (48%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ SEE+P + + L + L+E + Y +++ Y P RL + ++G+S Sbjct: 1 MSTILFELGSEELPPKSLKPLRDSLKASVESQLQEANISYDSLKAYAAPRRLAIEIEGIS 60 Query: 61 PHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ E++ GP V A +A +GF + G+ I+ D KGD L Sbjct: 61 EKQPDRTEQKRGPAVKAAYDAEGKPTRAAEGFAKGLGIDASELITIETD--KGDYIGYEL 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L I A+ +P K MR + ++RP+K ++ + + Sbjct: 119 TIQGQATTELLPNIFQTALDNLPIAKRMRSGASRE-----EFVRPVKWLVLM-----QDD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ID ++ + GN T GHR+H+P+PI + Y+ LE A V+ D + R+ I Sbjct: 169 QVIDATVQGLDAGNQTLGHRYHSPNPITIAHASDYLNVLENAKVIADFDRRQQLISERVT 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V + +DLL+E+ LV+ SF++++L +P+E + T++ +QK F Sbjct: 229 ALADEVNARAIVPEDLLDEVTSLVDLPVALRASFEERFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI +SNI++ D + +V GN +VV RL DA F+ +DQ Sbjct: 289 DSEGKLQPYFIFISNIESKDP-SQVVSGNEKVVRPRLADAEFFFLQDQK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---------LI 404 +PL + L + VF K+GT E+ RI L IA Sbjct: 337 ---------QPLIEMAESLK--NRVFQDKLGTIWEKSERIAKLAAFIAATFRQQNIAGYA 385 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D DVA RA +LSKADL + +V EFPELQG G YA L E + AIEE P+ Sbjct: 386 DIDVAQATRAAMLSKADLTSTLVGEFPELQGVAGTYYARLNGEPEAIAAAIEEQYLPKFS 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + I ++LAD++DTL+ + I++ P+GSKDP++LRR+ +G++RI++E ++ I Sbjct: 446 GDKLPQTAVGICLALADRIDTLVGIFGIDQAPTGSKDPFSLRRSAIGVLRILIEKQLPIN 505 Query: 525 LSQFIEDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L IE +I F + R + ++ + D I+A+L L Sbjct: 506 LVSLIEQAILNYQDKLPKAGETLTQVIDFINSRYRAMYTEQGVSVDTIQAVLAINPHMPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I +NEF S + KR+ ILA K ++ + L +AEK LY Sbjct: 566 DFDQRIHAVNEFRSLPQAATLAEINKRVANILA---KSEGQVGEAVDESLLTEDAEKALY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +S T + +Y QI L ++ P+ FFD V+VN +D ++ NRL+LL+ + Sbjct: 623 QALSTAKTEVAPLQAEAQYTQILQSLATLEVPLTGFFDNVMVNSEDEALKVNRLTLLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V +V ++ Sbjct: 683 RELFLTVADVGEL 695 >gi|254488839|ref|ZP_05102044.1| glycyl-tRNA synthetase, beta subunit [Roseobacter sp. GAI101] gi|214045708|gb|EEB86346.1| glycyl-tRNA synthetase, beta subunit [Roseobacter sp. GAI101] Length = 742 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 274/765 (35%), Positives = 396/765 (51%), Gaps = 89/765 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L E G+ Y + + TP RL L ++G+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLKKLVTNGLVEAGLTYASAAAFSTPRRLTLTVQGML 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A +KAI+GFLR GL + ++ KG++ A++RKP R Sbjct: 61 DASPSITEERKGPKADAPEKAIEGFLRGAGLTRDQLEE--RETPKGNILFAMIRKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW T W+RPL SILCIL AED +++ + + Sbjct: 119 ADIVAEVLETTIRNFPWPKSMRWGTG-----TLRWVRPLHSILCILSAED-GAQVVPMTV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP I V S D Y L+ A V+LDP RR+AI +DA +A A G Sbjct: 173 DGIDAGATTRGHRFLAPGAITVSSFDDYTAKLKRAFVVLDPAERRDAIWHDATNMAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEWPVVLMGRIGDDFLDLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW+ D + + ++ Sbjct: 293 ERFVTVANRTTADDGATILAGNEKVLSARLSDAKFFWENDLRIAQSDAGMQV-------- 344 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + RL +V FH K+GTQ E +SR+ L ++A ++ AD +A +KA Sbjct: 345 -------WVDRLS--NVTFHNKLGTQAELISRMEALAGELAPMVGADADEARQAARFAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G YA ++ + A ++H P GP ++VPT +SI V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGSYYAKAAGKSGAIAAAAQDHYAPLGPSDDVPTAPVSIAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + +PL Q Sbjct: 456 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDLHVPLDHLHAAQLVRNKRKV 515 Query: 533 ----------------NLILFFHDRLKLYLH--DRDIRHDLIE----AILRPENDNLLTI 570 F + ++H D+ D I A+ D L + Sbjct: 516 MPGLEDHHVEDLLHEIAKHGVFASAFQAFIHRNDKKAPTDDIAKLETAVPAKSGDLLSFL 575 Query: 571 VDLI---------------------------------KHLNEFFSSAKGEKFLLSAKRIF 597 D + K LNE + GE + KR Sbjct: 576 HDRLKVYLKDKGIRHDIIDACIAMPGNDDLTLLVKRAKALNETLKTDDGENLIQGFKRAN 635 Query: 598 QILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL+ E + E S ++ + E+ L+A + I +MD + + + S Sbjct: 636 NILSQAETADGVEYSFGADIKFAETDEERALFAALDAAEAQINPAMDAQDFTAAMSAMAS 695 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FFD V VN D+ VR NRL+LL I+ I V ++ KI Sbjct: 696 LRAPIDAFFDAVQVNSDNGTVRRNRLNLLSRIRTICTSVADLTKI 740 >gi|330500955|ref|YP_004377824.1| glycyl-tRNA synthetase subunit beta [Pseudomonas mendocina NK-01] gi|328915241|gb|AEB56072.1| glycyl-tRNA synthetase subunit beta [Pseudomonas mendocina NK-01] Length = 684 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 207/723 (28%), Positives = 340/723 (47%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALKSLGDAFLAGIEKGLKAAGLGYAASRVYAAPRRLAVLIEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L ++ GP + G +A GF R G+ I + + G Sbjct: 61 LEEQQADRSMNLDGPPIQAAFDADGNPTQAALGFARKCGVD------IAEIDRSGAKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + ++L TIV ++ +P PK MRW+ ++RP + ++ + Sbjct: 115 AQHIPGQPAVNLLPTIVQDSLDDLPIPKRMRWAARRD-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + ++D ++ G ++ GHRFHA +++ S Y DL A VL D RR I + Sbjct: 165 GDAVVDCEILAQKAGRVSRGHRFHANRDVRISSPASYAEDLRSAYVLADFAERREIISHR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+A + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELAAAEQGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESKDP-AQIVSGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA+ + D Sbjct: 335 -----------QKLEGFNQRL--ANVVFQAQLGSVFDKAQRVSALAGFIAREVGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E+ A+ E PRG +P+ Sbjct: 382 ARAGLLSKCDLATEMVSEFPEMQGIAGYYYALNDGESQDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E +D+ L+ ++ Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKGLDLDLAAAVDF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D I + +A+ + L ++ Sbjct: 502 AVAQYAGKVKTDGLAAQVLEFIFDRLRARYEDEGIEVAVYQAVRAVNPTSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ +L+ E ++ ++ Y +E L+A I Sbjct: 562 VQAFRKLPQAAALAAANKRVSNLLSKAE---GGVAAQVEAHYFDNPSEFALHAAIQQADH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L S+ EP++ FF+ VLVN +D VR NR +LL ++ + L V Sbjct: 619 AVQPLAAARQYSEALAKLASLREPVDAFFEAVLVNAEDPRVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|149201986|ref|ZP_01878960.1| glycyl-tRNA synthetase subunit beta [Roseovarius sp. TM1035] gi|149145034|gb|EDM33063.1| glycyl-tRNA synthetase subunit beta [Roseovarius sp. TM1035] Length = 749 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 278/772 (36%), Positives = 397/772 (51%), Gaps = 96/772 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAA+DL L L E G+ Y + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQSKAADDLRARLTEALVEAGLTYAGAAAFSTPRRLALTVQGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A ++AI+GFLR GL T D +I+ D KKG VY A + KP R Sbjct: 61 GQSPTTREERKGPRVDAPEQAIEGFLRGAGL-TRDDLEIR-DEKKGQVYFATITKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ + I+ PWPKSMRW + W+RPL SILCIL E + ++DLD+ Sbjct: 119 AEIVAEELDKIIRNFPWPKSMRWGAG-----SLRWVRPLHSILCILTDEAGEVTVVDLDV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF A V S D Y L A V+L+ E R I +A A A G Sbjct: 174 DGIRAGNTTEGHRFMAAGRFAVSSFDDYRTKLRRAHVILEAEERAAHIWQEASNQAFASG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LL E+ GLVEW V MG D +L LP E+++ +++ +QK F + + Sbjct: 234 LELVEDPSLLAEVAGLVEWPVVLMGRIDDAFLGLPPEVLQTSMREHQKFFSVKNPKTGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D G I+ GN +V+AARL DA FW+ D L A Sbjct: 294 ERFVTVANVETADQGVTILAGNQKVLAARLSDAKFFWENDLRTLQAEGLEGMGA------ 347 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + V FH K+G+Q +R++RI L ++IA + AD L ++A ++KA Sbjct: 348 ------------GLAHVTFHNKLGSQADRIARIAALAREIAPHVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA A +EH P GP + VP+ +S+ V+LA Sbjct: 396 DLQSAMVGEFPELQGLMGRYYAAEAGLAPEVAAACQEHYSPLGPGDAVPSAPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------------- 526 DK+DTL FWA+ ++P+GSKDP+ALRRA LGIIRII+ NK+ + LS Sbjct: 456 DKIDTLTGFWAVPDEPTGSKDPFALRRAALGIIRIIIANKLRVRLSVGIDNTDSDLIEAG 515 Query: 527 -----QFIEDQNLILFFHDRLK-LYLHDRDIRHDLIEAILRP----------------EN 564 + +L L +RL+ Y RD + EA + P Sbjct: 516 EFSPIECAYLGHLDLGQPNRLRSNYWRLRDFGKLIAEASMDPYNRYCKQTLLGFGKGNRV 575 Query: 565 DNLLTIV-DLIK---------------------------------HLNEFFSSAKGEKFL 590 ++LL+ + D +K L++F + GE L Sbjct: 576 NDLLSFLHDRLKVHLREEGIRHDVIDACLAMPGNDDLTLLVQRARALSDFLKTDDGENLL 635 Query: 591 LSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL E+K+ E S ++ + EK L+A ++ I ++ + + + Sbjct: 636 QGFKRANNILTQAEEKDGVEYSYGADVKFAETDEEKALFAALATAEPAIANALKAEDFAR 695 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ PI+ FF V VN + + +R NRL+LL I+NI L ++ +I Sbjct: 696 AMGAMAALRAPIDAFFTAVQVNAESQVIRRNRLNLLSSIRNICLQAADLGRI 747 >gi|258622965|ref|ZP_05717980.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM573] gi|258584748|gb|EEW09482.1| glycyl-tRNA synthetase beta subunit [Vibrio mimicus VM573] Length = 688 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 336/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVTNL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAKQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDANKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|85860061|ref|YP_462263.1| glycyl-tRNA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|123517130|sp|Q2LVI9|SYGB_SYNAS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|85723152|gb|ABC78095.1| glycyl-tRNA synthetase beta chain [Syntrophus aciditrophicus SB] Length = 690 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 225/728 (30%), Positives = 363/728 (49%), Gaps = 67/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EEIPA KA +D+S ++ L E + + + + TP RL L + + Sbjct: 1 MSNELLLEIGTEEIPAAFLPKALQDMSSMIRKALTEARIPFGQVHTFGTPRRLCLAVADV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +++ E+LGP G KA GF +S G+ ++ D KG+ Sbjct: 61 AEKQEDQVIEKLGPARRVSFDADGNPTKAALGFAKSQGVDISEIGTMQTD--KGEYICIS 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L ++ I + + KSMRW F + RP+ IL + E Sbjct: 119 RHISGKSTVSLLSEMLSRLITSLSFKKSMRWGNLD-----FRFARPIHWILALYGGE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I ++ I G + GHRF P V +L Y+ E V++ PE R+ IL +A Sbjct: 171 --VIPFRIENIESGATSRGHRFMHPEAFPVSNLQEYLARTREHFVIVAPEERKRIILEEA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A+AV ++E++DLLE + LVE+ + GSFD+KYL LP+E++ ++ ++QK F Sbjct: 229 RKAAAAVSGRVLENEDLLETVTYLVEYPTIVCGSFDRKYLELPKEVLITSMMSHQKYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI ++N A D A + +GN +V+ ARL DA F++ DQ Sbjct: 289 VDQEGRLLPFFITINNTLARDP-AVVTRGNEKVIRARLSDAQFFFEEDQKI--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 LD R+ L VVFH +GT E+V R R L IA ID + V Sbjct: 339 -----------RLDDRVEGLQ--QVVFHTLLGTSYEKVQRFRKLAGWIADRIDPSLKNRV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +R+ +L+KADL T++V EF ELQG +G+EYA+L E+ + AI EH P ++P Sbjct: 386 NRSALLAKADLDTQMVGEFSELQGIMGREYALLAGEDPTVARAIYEHYLPLTAGGDLPQT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 VS+ADK+D++ F+ +N P+G+ DPYALRR LG+I IIL+ K + L ++ Sbjct: 446 HEGAIVSIADKMDSIAGFFGVNLVPTGTADPYALRRQALGVINIILDKKYPLTLDDLVDE 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++I FF RL+ L + HD++ A+L +L+ ++ I Sbjct: 506 CISILEEKLKRPAEETRKDVIEFFRGRLENMLISQGHPHDVVSAVLAAGFADLVQVIKKI 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + F + E ++ KR IL + I P E +LY+ + + Sbjct: 566 EAMESFKAHPAYEPLAIAFKRAGNILKEFR------NGRIDPALFSAAEENQLYSTLLEA 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++++ Y L ++ +PI+ FF+ V+V VD+ +R NRLSLL+ + +I Sbjct: 620 RARVVKALEKDDYPAALLELAALRQPIDHFFESVMVMVDEENIRFNRLSLLEALFSIFRR 679 Query: 695 VINVQKIV 702 + + +IV Sbjct: 680 IADFSRIV 687 >gi|70733526|ref|YP_257165.1| glycyl-tRNA synthetase subunit beta [Pseudomonas fluorescens Pf-5] gi|123776099|sp|Q4KKR8|SYGB_PSEF5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|68347825|gb|AAY95431.1| glycyl-tRNA synthetase, beta subunit [Pseudomonas fluorescens Pf-5] Length = 684 Score = 750 bits (1938), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 336/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + AE + L+ G+ +Q Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKALNTLAEAFLAGIEKGLQSAGLSFQAKHVYAAPRRLAVLITQ 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ ++ + + G Sbjct: 61 LATQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGV------ELSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW+ ++RP + ++ +L Sbjct: 115 SQSIKGKPTASLLPTIVEDSLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++ID + G + GHRFH P +++ + +Y+ DL A VL D RR I Sbjct: 165 GDEVIDCTILAQKAGRDSRGHRFHHPQSVRITAPANYLADLRAAYVLADANERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + DLL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TAELATLQEGTAIVPADLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I++GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKDPRQ-IIEGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF K+G+ ++ RI L IA I D Sbjct: 335 -----------QKLEDFNLRLQ--NVVFQEKLGSVYDKAERISKLAAFIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +P+ Sbjct: 382 ARAGLLSKCDLATEMVGEFPEMQGIAGYYYALNDGEPEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E K D+ L+ + Sbjct: 442 VTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKKFDLDLNDAVAF 501 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AVSAFGSKVKAAGLADQVLEFIFDRLRARYEDEGVDVATYLSVRALKPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ K + I +Y E LY+ I Sbjct: 562 VQAFRKLPEAAALAAVNKRVSNLLS---KIEGNVPTTIEAKYFDNANEFSLYSAIQQADQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + L ++ EP++ FF+ V+VN +D +VR NR +LL ++ + L V Sbjct: 619 AVQPMAAARQYSETLARLAALREPVDAFFEAVMVNAEDAKVRANRYALLARLRGLFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|327482932|gb|AEA77339.1| Glycyl-tRNA synthetase beta chain [Vibrio cholerae LMA3894-4] Length = 688 Score = 750 bits (1937), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|158422656|ref|YP_001523948.1| glycyl-tRNA synthetase beta subunit [Azorhizobium caulinodans ORS 571] gi|158329545|dbj|BAF87030.1| glycyl-tRNA synthetase beta subunit [Azorhizobium caulinodans ORS 571] Length = 744 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 301/769 (39%), Positives = 415/769 (53%), Gaps = 95/769 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+ L ++ L E G++Y+ + + TP RL L + GL Sbjct: 1 MPDLLLELFSEEIPARMQAQAADTLRKLVTDALVERGLLYEGAKAFVTPRRLALAVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPR+GA + AI GFL+S GL +I +I+ DPKKG+ Y+AV+ +P + Sbjct: 61 GRQADSREERKGPRMGAPEGAIQGFLKSAGLASIDQAKIESDPKKGEFYVAVIERPGKAT 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ IVP ++ PWPKSMRW T W+RPL SI+C E +++ ++ Sbjct: 121 TEVIAEIVPEIVRTFPWPKSMRWGTG-----TMRWVRPLHSIVCTFGTEVEDPEVVRFEV 175 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G++T GHRF AP P V+ L+ ++ LE A V+ D + R+ ILNDA LA G Sbjct: 176 EGIVSGDVTRGHRFLAPEPFAVRRLEDWMAKLEAAKVVADRDRRKAIILNDAKDLALVHG 235 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 LELVED+ LLEE+ GLVEW MGSF++++L +P+E+IR TI+ NQKCFV R R G L Sbjct: 236 LELVEDEGLLEEVCGLVEWPVTLMGSFEERFLDIPDEVIRATIRANQKCFVLRDPRTGRL 295 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FILVSNI A+DGGAAIV GN RV+ ARL DA FW D+ Sbjct: 296 ANRFILVSNIAATDGGAAIVAGNERVIRARLSDAKFFWDTDRR----------------- 338 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 P+ RM++ D + FH K+G+QG R++RI L ++IA + ADV L ++A L+K Sbjct: 339 ---TPMADRMSKFDA--ITFHEKLGSQGARINRIVALAREIAPRVGADVDLTEQAARLAK 393 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G+ YA + A EEH KP+GP + VPT +SI V+L Sbjct: 394 ADLLTEVVGEFPELQGLMGRYYAQHEKLPPEVAAACEEHYKPQGPSDRVPTAPVSIAVAL 453 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK------------------- 520 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRIIL+N Sbjct: 454 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIILDNNLRLPLRPLLVSASRTILGE 513 Query: 521 ----------IDIPLSQFIEDQNLILFFHDRLKLYLHDRDI-----------RHDLIEAI 559 + +L+ RL D D+ DL + + Sbjct: 514 EHFERHPHDVFRLETIADKVVSDLLQGLARRLANLPADADVESAERVEGMTLSGDLADDL 573 Query: 560 LRPENDNL----------LTIVDLIKHL----------------NEFFSSAKGEKFLLSA 593 L D L +VD + L F + G L Sbjct: 574 LAFFGDRLKVHLRDRGARHDLVDAVFALPGQDDLLLVDRRVAALAAFLETEDGRTLLAGY 633 Query: 594 KRIFQILAIEEKKNREISLEISPQ-YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 +R IL IEEKK+ S L AE+ L A I + +++ + + Sbjct: 634 RRAVNILRIEEKKDGVAYKGPSEAKLLKEPAEEHLAAAIETVKRQVADAVAREDFAAAMG 693 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + P++ FF+ V VN + +R NRL LL I++ + + +I Sbjct: 694 ALAHLRGPVDAFFEGVTVNAPEAALRINRLKLLDEIRSATRGIADFDRI 742 >gi|15640052|ref|NP_229679.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587243|ref|ZP_01677016.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 2740-80] gi|147674732|ref|YP_001218392.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae O395] gi|153817571|ref|ZP_01970238.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae NCTC 8457] gi|153821948|ref|ZP_01974615.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae B33] gi|227080257|ref|YP_002808808.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae M66-2] gi|229508305|ref|ZP_04397809.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae BX 330286] gi|229508856|ref|ZP_04398347.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae B33] gi|229517127|ref|ZP_04406573.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC9] gi|229606579|ref|YP_002877227.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae MJ-1236] gi|254851584|ref|ZP_05240934.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae MO10] gi|255746798|ref|ZP_05420744.1| glycyl-tRNA synthetase beta chain [Vibrio cholera CIRS 101] gi|262167108|ref|ZP_06034823.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC27] gi|298501204|ref|ZP_07011003.1| glycyl-tRNA synthetase, beta subunit [Vibrio cholerae MAK 757] gi|11387203|sp|Q9KVW8|SYGB_VIBCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|172047498|sp|A5F487|SYGB_VIBC3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781870|sp|C3LP93|SYGB_VIBCM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|9654412|gb|AAF93198.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548489|gb|EAX58545.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 2740-80] gi|126511839|gb|EAZ74433.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae NCTC 8457] gi|126520568|gb|EAZ77791.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae B33] gi|146316615|gb|ABQ21154.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae O395] gi|227008145|gb|ACP04357.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae M66-2] gi|227011977|gb|ACP08187.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae O395] gi|229346190|gb|EEO11162.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC9] gi|229354131|gb|EEO19063.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae B33] gi|229354578|gb|EEO19500.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae BX 330286] gi|229369234|gb|ACQ59657.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae MJ-1236] gi|254847289|gb|EET25703.1| glycyl-tRNA synthetase subunit beta [Vibrio cholerae MO10] gi|255735555|gb|EET90954.1| glycyl-tRNA synthetase beta chain [Vibrio cholera CIRS 101] gi|262024494|gb|EEY43180.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae RC27] gi|297540076|gb|EFH76138.1| glycyl-tRNA synthetase, beta subunit [Vibrio cholerae MAK 757] Length = 688 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|330447264|ref|ZP_08310914.1| glycyl-tRNA synthetase, &beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491455|dbj|GAA05411.1| glycyl-tRNA synthetase, &beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 689 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 215/721 (29%), Positives = 343/721 (47%), Gaps = 62/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FL+E+ +EE+P + AE + LK + + ++ Y P RL L + GL+ Sbjct: 4 KNFLIELGTEELPPKALRTLAEAFAANFEAELKAADLPHDGIKWYAAPRRLALKVTGLAE 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + P+K+ E+ GP + G KA G+ R G+ ++ D KG+ L Sbjct: 64 NQPDKVVEKRGPAIASAFDADGNPTKAAQGWARGNGITVDQAERMVTD--KGEWLLFKQE 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + +L + A+ K+P P+ MRW + +IRP+K++ +L ++ Sbjct: 122 VKGQPAQTLLPELAAAALAKLPIPRPMRWGDKDT-----QFIRPVKTLTMLL-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +++ + + GHRF + + D Y LEE V+ D E R+ I+ DA Sbjct: 172 LVEGTILGVASARTIRGHRFMGEAEFTIDNADQYPAILEERGKVMADYEARKAIIVADAQ 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + A AVG + DL+EE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 KAAQAVGGTADLEDDLVEEVTSLVEWPVVLTASFEEKFLKVPSEALVYTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI VSNI ++D + I+ GN +VV RL DA F Sbjct: 292 DAEGKLVPKFIFVSNIISNDP-SQIISGNEKVVRPRLADAEFF----------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 FN DL L R+ +L+ +F ++GT ++ RI L IA I ADV R Sbjct: 334 ---FNTDLKSKLIDRLPQLETA--IFQKQLGTIKDKTDRITELAGYIADKIGADVDNAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ + Sbjct: 389 AGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEQEDVALALNEQYMPRFAGDQLPSTPV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN D+ L + + Sbjct: 449 SSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYDLDLVDLVAKAH 507 Query: 534 LI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + F R + + D D+I+A+L +K ++ Sbjct: 508 SLFGDKLTNNNVDSDVIEFMLGRFRAWYQDAGFSIDVIQAVLAMHPTQPADFDKRVKAVS 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F E + KR+ ILA K + E+ + L+ AEK L ++ + + Sbjct: 568 HFRELDAAESLAAANKRVGNILA---KFDGELPTTVDNSLLVEAAEKELAEKVTAVVSAL 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y L S+ EP++ FFD V+V DD +++ NRL+LL ++N L V ++ Sbjct: 625 EPVFAAGDYQTALTELASLREPVDAFFDNVMVMADDEKLKVNRLALLNLLRNQFLKVADI 684 Query: 699 Q 699 Sbjct: 685 S 685 >gi|126668181|ref|ZP_01739142.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter sp. ELB17] gi|126627330|gb|EAZ97966.1| Glycyl-tRNA synthetase, beta subunit [Marinobacter sp. ELB17] Length = 694 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 191/701 (27%), Positives = 333/701 (47%), Gaps = 61/701 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + ++ + ++ L+ G+ + + + P RL L ++ Sbjct: 3 MATQDFLVELGTEELPPKALKQLSDAFTQGIVSGLQAAGIEFGAVEPFAAPRRLALRIRD 62 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P+K E+ GP V G +A+ GF S G+ ++ D KG + Sbjct: 63 LAHAQPDKPVEKRGPAVKTAFDDAGNPTRALTGFATSLGVTPDELDTLETD--KGAWLVF 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R +++ ++ ++ +P PK MRW + ++RP+ ++ + + Sbjct: 121 RTVEQGRTTAELMPELIEQSLAALPIPKRMRWGAHRT-----EFVRPVHWLVMLYGS--- 172 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +ID + + GN T GHRFH P + + + Y L E VL D RR I Sbjct: 173 --TVIDHPIMGLKPGNKTRGHRFHCPKSLIIPTPADYEVVLRQEGYVLADFAQRREQIRK 230 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + LA V D+ LL+E+ L EW MG F++++L +P E + ++K +QK F Sbjct: 231 GVNALALQQNCVAVIDEALLDEVTALNEWPVPLMGRFEERFLQVPAEALISSMKEHQKYF 290 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G + FI V+N+++ D + ++ GN +V+ RL DA F++ D+ Sbjct: 291 HLVDDNGQMQPFFITVANLESKDP-SQVIAGNEKVIRPRLSDAAFFYETDRK-------- 341 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K LDQR+ RL +VF K+G+ ++ R+ L KIAQ I +D AL Sbjct: 342 ------------KRLDQRIDRLKP--IVFQDKLGSVYDKSVRVAALAGKIAQAIGSDPAL 387 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +RA +L+K DL TE+V EF +LQG +G+ YA E+ A+ E PR +N+PT Sbjct: 388 AERAAMLAKTDLVTEMVLEFTDLQGIMGQYYATNDGEHADVASALNEQYMPRFAKDNLPT 447 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 V++AD+LD+L+ + IN+ PSG++DP+ALRRA LG++RII+E ++ + L + Sbjct: 448 TLTGCAVAIADRLDSLVGLFGINQPPSGTRDPFALRRAALGVLRIIIERQLPLDLQTCCD 507 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ + +R + Y ++ I ++ A+ L +K Sbjct: 508 WAAQQFTDLPAENPATSVVDYMLERFRAYYDEQGISAEVYLAVHARRPTRPLDFDRRVKA 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ ILA + + + + L AE L + Sbjct: 568 VEAFRQLPEAGALAAANKRVSNILAKQ--SDSTVHDTVDASLLQDAAELALAEQVEHQTD 625 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + + Y L + +P++ +FD+V+V DD V Sbjct: 626 TVLPLFEKGDYTAALHSLADLHQPVDRYFDEVMVMADDEAV 666 >gi|121727896|ref|ZP_01680955.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V52] gi|121629840|gb|EAX62255.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V52] Length = 688 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLLGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|229530194|ref|ZP_04419583.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae 12129(1)] gi|229332327|gb|EEN97814.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae 12129(1)] Length = 688 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 200/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I AD+ Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADMEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|253699299|ref|YP_003020488.1| glycyl-tRNA synthetase subunit beta [Geobacter sp. M21] gi|259511925|sp|C6E0B4|SYGB_GEOSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|251774149|gb|ACT16730.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. M21] Length = 687 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 212/727 (29%), Positives = 341/727 (46%), Gaps = 68/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LEI EEIPA KA D+ +++ + Y + TP RL L +KG+ Sbjct: 1 MAKDLFLEIGCEEIPAGFVPKAMADMELLIKKEFDSARIEYGEIVTLGTPRRLVLAVKGV 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ +GP G KA GF R G+ + + KG+ AV Sbjct: 61 AERQPDAELTAMGPAKSHAYDADGNPTKAAQGFARGQGIDVSQLKLVTTE--KGEYLAAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L ++P I +P+ KSMRW+ + RP+ I + Sbjct: 119 KSEIGRETAELLPEMLPRLIGNIPFKKSMRWADFD-----VRFARPIHWIAALFDG---- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 K++ I G+ + GHRF A P V+ L HY+ + E V+ DP R+ I + Sbjct: 170 -KVVPFSFGNIDSGSASRGHRFMANTPFPVRDLAHYLEECERHFVIPDPNKRKEIIRAEI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A ++ D+ LLE++ LVE+ G+F +L +P E++ +++ +Q+ F Sbjct: 229 ERVAKQAKGNVLPDEALLEQVSYLVEYPSAVHGTFSPDFLVVPREVLITSMREHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI ++N D +V+GN RV+ ARL DA F+ D Sbjct: 289 VDDEGKLLPGFITINNTITEDP-QVVVKGNERVLRARLSDARFFFDEDHKV--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 L+ R+ L VV+ AK+GT E++ R R LGK++AQ ++ V V Sbjct: 339 -----------RLETRVESLK--SVVYQAKLGTSYEKMERFRELGKRLAQRLNPSVIKQV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA L KADL + +V EFPE+QG +G+EYA+ E + +AI EH P +P + Sbjct: 386 ERAATLCKADLVSGMVGEFPEVQGIMGREYALHDGEEPAVANAIAEHYLPTQAGGELPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I VSLADK+DT+ + + P+GS DPYALRR+ LGII IILE PLS+F++ Sbjct: 446 DIGAFVSLADKMDTICGCFCVGLIPTGSADPYALRRSALGIINIILEKGYREPLSEFVKA 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++++ FF R + DR D +EA+ D+L+ I Sbjct: 506 SLDLLAAKATRPLAEVQKDVLDFFRGRFVNLMADR-FPSDAVEAVASVSFDDLVEAAAKI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F + ++ KR+ I+ + +S + AE L+ ++ Sbjct: 565 EALAGFRNRDDFGPLAVAFKRVCNIVK------DGVDTPVSAELFQDAAEGELHQALTQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + +++ Y + ++ +++FF++V+V DD VR NRL+LL I + Sbjct: 619 SGKVADALKKADYLAALTEIATLKPAVDLFFEKVMVMADDERVRQNRLALLTGIARLFAS 678 Query: 695 VINVQKI 701 + + ++ Sbjct: 679 LADFSRL 685 >gi|332188373|ref|ZP_08390098.1| glycyl-tRNA synthetase, beta subunit [Sphingomonas sp. S17] gi|332011602|gb|EGI53682.1| glycyl-tRNA synthetase, beta subunit [Sphingomonas sp. S17] Length = 694 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 262/727 (36%), Positives = 381/727 (52%), Gaps = 61/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPARMQ A E L+ + L + G+ + Y P RL L KGL Sbjct: 1 MTDFLLELRSEEIPARMQAGARESLAKLFTAELAKAGLSAGEIVTYAGPRRLALIAKGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL ++D V A+ KP R Sbjct: 61 AATEAVSEEVKGPRASAPPQALEGFLRKTGLTREQ--LTERDG----VLFAITEKPGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +P ++ PWPKSMRW + + W+RPL +I+ + E ++ ++ Sbjct: 115 AEVLAEAIPAIVRAFPWPKSMRWGAESASTESMRWVRPLHAIVALFGGE-----VVPFEV 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+T GHRFHAP I + D Y+ L A VL+D + R I A LA+ G Sbjct: 170 AGITSGNVTRGHRFHAPAEITLTGADTYVEQLRAAKVLVDQDERAAIIRERASALAAEAG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED+ L+ E GL EW +G FD+ YL +P E+I+LT + NQK FV R+ +G LA Sbjct: 230 LELVEDEGLVAENAGLTEWPVPLLGRFDEAYLDVPPEVIQLTARVNQKYFVCRSADGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+ +NI+A+DGG IV+GN +V+AARL DA F++ D Sbjct: 290 NAFVCTANIEATDGGTKIVEGNGKVLAARLSDARFFYETD-------------------- 329 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVL 417 L LD +L+ +VFH K+GT +V R+ L + +A + + D L RA L Sbjct: 330 LKTKLDDLRPKLE--KIVFHEKLGTVAGKVERVAKLAEWLASEGIVPNCDSVLARRAAEL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T +V EFPELQG +G YA Q E+ + +A+ +H KP G ++VP+ +++ V Sbjct: 388 AKADLVTGMVGEFPELQGLMGGYYAAAQGEDTAVAEAVRDHYKPVGQGDDVPSAPVTVAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL--- 534 +LADKLDT+++F++I+EKP+GSKDP+ALRRA LG+I ++L N + L Sbjct: 448 ALADKLDTIVSFFSIDEKPTGSKDPFALRRAALGVIALVLSNGLRGSLYSLFHQSAPEAG 507 Query: 535 -------------ILFFHDRLKLYLHDRDIRHDLIEAILRPEND-------NLLTIVDLI 574 F DRLK+ +RHD+I+A++R D +L+ ++ + Sbjct: 508 DGDMGQVVAADYFYDFVIDRLKVQQRSEGVRHDVIDAVVRMGGDDDIGGERDLVRLLARV 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F ++ G L KR IL E + + P Y L AE L A + Sbjct: 568 RALQAFVTTDDGTNLLAGYKRAANILKKEGVEGDQNWTA--PTYTLEPAEADLIAALDAA 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +++ + + L S+ PI+ FFD V VN D R RL+LL ++ + Sbjct: 626 EPKAAQAVKAEDFEAAMAALASLRAPIDRFFDDVTVNDADAVKRTARLALLARVRAAVHT 685 Query: 695 VINVQKI 701 V + +I Sbjct: 686 VADFSRI 692 >gi|84516922|ref|ZP_01004280.1| glycyl-tRNA synthetase beta subunit [Loktanella vestfoldensis SKA53] gi|84509390|gb|EAQ05849.1| glycyl-tRNA synthetase beta subunit [Loktanella vestfoldensis SKA53] Length = 724 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 273/746 (36%), Positives = 401/746 (53%), Gaps = 69/746 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L E G+ Y + TP RL L + GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARAADDLRKLVTDGLVEAGLTYAGAAAFATPRRLTLAIDGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTIS-------------------DCQIKK 101 S EE+ GP + A +A+ G+L+ G++ D + Sbjct: 61 AESTIFREEKKGPPIDANPRALKGYLQGLGMEAPDKWYDEQIEALKAGEVISFGDSFVTT 120 Query: 102 DPKKGD-VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLK 160 KG V +AVL P R D++ ++ ++ PWPKSMRW T A W+RPL+ Sbjct: 121 QELKGKRVLMAVLEYPPRKAADIIAEVLDATVRNFPWPKSMRWGTG-----ALKWVRPLQ 175 Query: 161 SILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLD 220 SI+C+L +++A +++ L + I G T GHRF +P V D Y L+ A V+L Sbjct: 176 SIICLL-SDEAGAEVVPLTIDAITAGRSTRGHRFLSPDAFTVNGFDDYEAKLKRAHVILR 234 Query: 221 PECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 + R I NDA + A A GLELVED+ LL E+ GLVEW V +G D +L LP E+++ Sbjct: 235 ADERAEVIWNDATQQAFASGLELVEDRGLLAEVAGLVEWPVVLLGRIDDAFLGLPPEVLQ 294 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 ++K +QK F R + F+ V+N+ +D GA I+ GN +V+AARL DA FW+ D Sbjct: 295 TSMKEHQKFFSVRNPKTGRIERFVTVANMATADHGATILAGNQKVLAARLSDAKFFWEND 354 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + A + +V FH K+G+Q +R++RI L ++I Sbjct: 355 LRTVKADGLEGMGA------------------GLANVTFHNKLGSQADRIARIAALAREI 396 Query: 401 AQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 A + AD L ++A +++KADL +E+V EFPELQG +G+ YA N + A ++H Sbjct: 397 APHVGADPDLAEQAAIVAKADLQSEMVGEFPELQGLMGRYYATAAGLNPAVAAACQDHYS 456 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P GP + VPT +S+ V+LADK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN Sbjct: 457 PLGPSDAVPTAPVSVAVALADKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENG 516 Query: 521 IDIPLSQFIEDQNL-----------------------ILFFHDRLKLYLHDRDIRHDLIE 557 I L + + FFHDRLK+YL D+ IRHD+I+ Sbjct: 517 ARINLRDIRVSAEMRIPDEFKSGETVPDDAGANYDSLLAFFHDRLKVYLKDQGIRHDIID 576 Query: 558 AILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEIS 615 A + P ND+L +V + L + ++ GE + KR IL E K+ E S Sbjct: 577 ACIAMPNNDDLTLLVKRARALADVLATDDGENLIQGFKRANNILTQAEAKDGVEYSYGAD 636 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 ++ AEK L+A + I +M + + + ++ PI+ FF V VN D + Sbjct: 637 LKFAEDGAEKALFAALDAADAKIAPAMKDEDFSTAMTAMAALRGPIDAFFTAVQVNDDRQ 696 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKI 701 +R NRL+LL I+ I L V ++ KI Sbjct: 697 VIRRNRLNLLSRIRKICLSVADLTKI 722 >gi|153830859|ref|ZP_01983526.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 623-39] gi|148873669|gb|EDL71804.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 623-39] Length = 688 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 202/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVTNL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFSGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + K E EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKYDGKLGE---EIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|229587588|ref|YP_002869707.1| glycyl-tRNA synthetase subunit beta [Pseudomonas fluorescens SBW25] gi|259511929|sp|C3KE40|SYGB_PSEFS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229359454|emb|CAY46295.1| glycyl-tRNA synthetase beta chain (ec 6.1.1.14) (glycine--trna ligase beta chain) (glyrs) [Pseudomonas fluorescens SBW25] Length = 684 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 200/725 (27%), Positives = 337/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + A+ + L G+ ++ + Y P RL + L Sbjct: 1 MSAQDFLVELGTEELPPKALNTLADAFLAGIEKGLHSAGLKFEAKKVYAAPRRLAVLLTA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP G +A GF + G+ ++ + + G Sbjct: 61 LETQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGV------ELSEIDQSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW ++RP + ++ +L Sbjct: 115 SQVITGKPTASLLPTIVEDSLNDLPIPKRMRWGARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++ID L G + GHRFH P +++ S +Y DL A VL D RR I Sbjct: 165 GDQVIDCTLLAQKAGRDSRGHRFHHPQAVRITSPANYAADLRAAYVLADANERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TEELARLQEGTAIVPPSLLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKDP-QQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF K+G+ ++ R+ L IAQ I D A Sbjct: 335 -----------QKLEDFNLRLQ--NVVFQEKLGSVYDKAVRVSKLAAYIAQRIGGDAAWA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEPDDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI+++ K+D+ L+Q + Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLTQAVVF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVGQFGAKVKQAGLAEQVLEFVFDRLRARYEDEGVDVSVYLSVRALQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ +L+ E + ++ P E L + I+ Sbjct: 562 VQAFRKLPEADALASVNKRVSNLLSKAEGLG---NADVDPGLFADAKEFSLNSAIAKAEN 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + + Y + L ++ EP++ FF+ V++N +D VR NR ++L ++ + + + Sbjct: 619 AVKPLIAERNYAEALARLATLREPVDAFFEAVMINAEDAGVRKNRYAMLARLRGLFVNIA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISTL 683 >gi|327478621|gb|AEA81931.1| glycyl-tRNA synthetase subunit beta [Pseudomonas stutzeri DSM 4166] Length = 684 Score = 748 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 345/725 (47%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + K AE + LK+ G+ + + Y P RL + ++ Sbjct: 1 MSALDFLVELGTEELPPKALAKLAEAFCAGIEKGLKDAGLGFAKAQAYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF R G+ + + + G Sbjct: 61 LATQQPDRSINLDGPPMQAAFDAHGEPTQAALGFARKCGVD------LAEIDRSGPKLKF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ +P PK MRW+ ++RP + ++ + Sbjct: 115 SRTIEGQPATQLLPGIVEASLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++ID ++ G + GHRFH+P + + Y+ DL A V+ D RR I Sbjct: 165 GEQVIDCEILAQRAGRESRGHRFHSPGQVHISKPSSYLEDLRGAHVIADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LAS + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEQLASEQNGSAIVPPALLDEVTALVEWPVPLVCSFEQRFLEVPQEALISTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANIESKDP-AQIVSGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL++ RL +VVF A++GT ++ R+ L IA+ D A Sbjct: 335 -----------QPLERFNDRLK--NVVFQAQLGTVYDKAERVSRLAGLIAERTGGDKARA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSKADL TE+V EFPE+QG G YA+ + E A+ E PRG +P+ Sbjct: 382 MRAGLLSKADLATEMVGEFPEMQGIAGYYYALNEGEPEDVALALNEQYMPRGAGGELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + + Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLVEAVNF 501 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AIGQFGTQVKSAGLADQVLEFIFDRLRARYEDEGVDVAAYLSVRAVQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + E + KR+ +LA E K + + P++ E LY+ + Sbjct: 562 VQAFRTLPEAEALAAANKRVSNLLAKFEAK---LPEAVEPRWFDNATEFSLYSALQQAEQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + + L + P++ FF+ VLVN +D VR NR +LL ++ + L V Sbjct: 619 AVQPLAAARQYREALERLAHLRGPVDAFFEAVLVNAEDASVRANRYALLARLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISAL 683 >gi|110832869|ref|YP_691728.1| glycyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|110645980|emb|CAL15456.1| glycyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 690 Score = 748 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 216/724 (29%), Positives = 350/724 (48%), Gaps = 63/724 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L+E+ +EE+P + + L+ + L E G+ + + ++ P RL L ++ L Sbjct: 1 MSRDLLIELGTEELPPKALASLSAALTDEFVRQLDEAGLNHGAVERFAAPRRLALLVRDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 ++ ER GP V G KA GF S GL D ++D KG+ +A Sbjct: 61 DEKQADRDIERQGPAVQAAFDSDGNPTKAAQGFAASLGLTV--DQLGRQDTGKGERLVAQ 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + +++ +IQK+P PK MRW ++RP ++ + Sbjct: 119 ITEQGKSAAELIPAFFTQSIQKLPIPKRMRWGKRK-----VQFVRPAHWLVALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 +++I +L ++ G +YGHRFHAP I++ S Y + +E + VL D + R+ I Sbjct: 169 DEVIPFELLDLQSGRTSYGHRFHAPGAIELASASEYAQRIENDGHVLADFDRRKAMIKEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 G + DLL E+ LVEW + MGSFD +L +P+E + ++ +QK F Sbjct: 229 TLAAGKEAGGVAQINPDLLNEVTALVEWPEALMGSFDDDFLRVPQEALISAMEEHQKYFS 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI +SNIQ+ D ++ GN +V+ RL DA F+ D Sbjct: 289 VLDNDGKLMPRFITISNIQSKDP-QQVIHGNEKVIRPRLADAAFFYDND----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L Q L +VVF ++GT E+ RI L IA+ I DV Sbjct: 337 ---------CKRTLAQHAEGL--TNVVFQQQLGTVAEKCERIGGLAAVIAENIGGDVDNA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A LSKADL +E+V EF +QG +G A + + +A+ E PR + +P + Sbjct: 386 KLAGKLSKADLNSEMVGEFDTMQGIMGFYLAQREGQPKEVANALYEQYLPRFAGDTLPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 K + VSLADK+DTL+ + I +KPSG+KDPYALRRATLG++RII+E+++ + L + ++ Sbjct: 446 KTGMAVSLADKIDTLVGIFGIGQKPSGTKDPYALRRATLGVLRIIIEHELALDLRELLDK 505 Query: 532 QNLIL--------------FFHDRLKLYLHDRDIRHDLIEAILRPEN--DNLLTIVDLIK 575 L F R + ++ I +I ++L ++ L +K Sbjct: 506 AAEQLGERIDTAQVDDAFEFIKGRYRAIYQEQGIATPVILSVLAIDDACRKPLDFDRRVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ ILA E E EI L EAEK L ++ Sbjct: 566 AVAAFQQRDEAQALAAANKRVSNILAKLETAPAE---EIDGALLEDEAEKTLTNMVVAAF 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 E ++ Y + ++L + EP++ FFD V+V +D VR+NRL+LL +++++ L V Sbjct: 623 EQTYELLEAGDYASVLEMLAQLREPVDTFFDTVMVMAEDEAVRNNRLALLAFLRDLFLNV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|304309658|ref|YP_003809256.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium HdN1] gi|301795391|emb|CBL43589.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium HdN1] Length = 691 Score = 748 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 213/721 (29%), Positives = 355/721 (49%), Gaps = 62/721 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + + E + + L +G+ ++++R +P RL + + L+ Sbjct: 10 DLLIELGTEELPPKALSRLMESFAHSIREYLGAQGLAFESVRPLASPRRLAVIVSALAGQ 69 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP R G KA GF RS G++ + IK D KG+ Sbjct: 70 QADQTVEKKGPTLVAAYDREGNPSKAAIGFARSCGVEFDALESIKTD--KGEWLFHRSSH 127 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +++++ ++ A+ ++P PK M W + + ++RP ++ + ++ Sbjct: 128 KGRALDEIVGPMIKSALDQLPIPKRMHWGSRRAL-----FVRPAHWLVVLY-----GNRV 177 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + G +YGHRFHAP I ++S Y L+ A V+ D RR I AHR+ Sbjct: 178 LPCEALGLTAGRTSYGHRFHAPDAITIESPSSYEAQLQHAYVVADFFARRTQIAESAHRI 237 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G L +LL+E+ GLVEW +G+FD ++L +P+E + T+++NQK F Sbjct: 238 ANEMGATLSIAAELLDEVTGLVEWPIPLVGNFDPEFLSVPQEALISTMESNQKYFPLFDN 297 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N FI ++NI+++ ++ GN RVV RL DA F++ DQ + + Sbjct: 298 TGKLLNRFITIANIESTHP-DRVIAGNERVVRPRLSDARFFFETDQKQRLEDHAELQ--- 353 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 VVF ++G+ E+ R L ++IAQ+I + L RA Sbjct: 354 -------------------QKVVFEKQLGSVDEKSVRNSALAREIAQVIGGEPGLAKRAG 394 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL + +V EFPELQG +G+ YA+ Q E AI EH PR + +P Sbjct: 395 RLAKADLASNMVGEFPELQGVMGEYYALGQGEPKDVATAIREHYLPRYSGDAMPATLTGS 454 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADK+D+LI I + PSG KDPYALRRA +G++RI++EN+ I LS E Sbjct: 455 AVALADKVDSLIGILGIGKIPSGDKDPYALRRAAIGVLRIVVENRFGISLSMLAEASISL 514 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 Q+ + F R+ Y ++ I D + A+L +D I++ + EF Sbjct: 515 YSSRLTNPNVKQDFLEFIRARIPGYFAEQGIASDTVRAVLAVSSDAPSDIMERAIGVTEF 574 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ IL EK+ S + L AE L+ +++ + Sbjct: 575 RTYPEAAALAAANKRVRNIL---EKRTDNGSQAVDGALLKESAEVELFHRLAETREKLTT 631 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 Y L + P++ FF++VLVN + EVR NRL+LL ++ + L + ++ + Sbjct: 632 L--RGNYSAQLKTLAELRTPVDNFFEKVLVNAESPEVRTNRLNLLANLQELFLGIADIAE 689 Query: 701 I 701 + Sbjct: 690 L 690 >gi|83589468|ref|YP_429477.1| glycyl-tRNA synthetase, beta subunit [Moorella thermoacetica ATCC 39073] gi|123725759|sp|Q2RKV5|SYGB_MOOTA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|83572382|gb|ABC18934.1| glycyl-tRNA synthetase beta chain [Moorella thermoacetica ATCC 39073] Length = 694 Score = 748 bits (1932), Expect = 0.0, Method: Composition-based stats. Identities = 224/733 (30%), Positives = 348/733 (47%), Gaps = 71/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D + EI +EEIPAR + A E ++ + LL+E + Q + Y TP RL LYL L Sbjct: 1 MARDLIFEIGTEEIPARFMNPALEQMAAVASQLLQEYRLPCQKVATYGTPRRLALYLTAL 60 Query: 60 SPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E ++E GP V A KA GF RS G+ + + ++ G A+ Sbjct: 61 AENQEELVQEIKGPPVKAAFTADGQPTKAALGFARSMGVAV--EELVTREYNGGQYVFAI 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R+ R VL ++ + + +PK MRW + + RP++ +L + +E Sbjct: 119 KREQGRPAVTVLPELLLAVVNALSFPKPMRWGSLE-----IRFARPIRWLLALFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I ++L + N TYGHRF AP P +V + Y + LEE VL+D RR I Sbjct: 171 --VIPVELAGLTASNQTYGHRFLAPGPHQVPTASAYFQVLEENYVLVDQHRRRQLIWEQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LAS G + +D +LLEEI LVE+ G FD +YL LP+E++ ++ +Q+ F Sbjct: 229 TGLASREGGRVEKDPELLEEITYLVEYPTALAGHFDPEYLKLPQEVVITPMRDHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI V N +D I +GN RV+AARL DA F++ D+ Sbjct: 289 WNAQGELLPRFITVHNG-TADHLENISRGNERVLAARLADAAFFYQEDRQ---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL ++ +L+ ++VF +GT + R++ L + +D LV Sbjct: 338 ----------TPLAAKVPKLE--EIVFQESLGTMLAKTRRLQRLAVNLVNTLDLPAELVP 385 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +R L+KADL T +V EFPELQG +G YA E C I +H PR + +P Sbjct: 386 LVERTAELAKADLVTAMVYEFPELQGIMGSYYAAHDGERAEVCQGIRQHYWPRFAGDRLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + V LAD+LDTL+ + P+GS+DPYALRR G++ I +E + L+ I Sbjct: 446 DSLTGMVVGLADRLDTLVGCFGAGLIPTGSQDPYALRRQATGVVTIAVEFNLKFSLTASI 505 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + L+ F RL+ L ++ R+D+I+A L +D+L Sbjct: 506 AAAYEGYTAGGIQLARPLDVVQEQLVQFCRQRLEHLLEEKGYRYDVIQACLAAGSDDLAA 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L+ F + R F + +K + P+ L +AE LY Sbjct: 566 AYHRTRDLSAFREEEGFAALQTAFTRAFNLARQAREK-----YHLRPEALQEKAEAELYR 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + + Y + ++ PI+ FFD VLV D EVR+NRL+LLQ I Sbjct: 621 ALMETRHQAEPRLRAGDYLAALKAMAALRGPIDAFFDNVLVMAPDMEVRNNRLALLQAIV 680 Query: 690 NIILIVINVQKIV 702 N++ + + ++V Sbjct: 681 NLVFQIADFSRLV 693 >gi|332968464|gb|EGK07530.1| glycyl-tRNA synthetase beta subunit [Psychrobacter sp. 1501(2011)] Length = 697 Score = 748 bits (1932), Expect = 0.0, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 363/733 (49%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ SEE+P + + L + LK+ + Y +++ P RL L ++G+S Sbjct: 1 MSTILFELGSEELPPKSLKPLRDSLQASVESQLKDADISYDSLKVMAAPRRLSLLIEGIS 60 Query: 61 PHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++IE++ GP V A +A +GF + G+ I+ D KGD L Sbjct: 61 DKQPDRIEQKRGPAVKAAYDSEGKPTRAAEGFAKGLGIDVSELMTIETD--KGDYIGYEL 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L I A+ +P K MR + ++RP+K ++ + + Sbjct: 119 TVQGQETTELLPNIFQNALDNLPIAKRMRSGASRE-----EFVRPVKWLVLM-----QDD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ ++ + GN T GHR+H+P P+ + Y LE A V++D + R+ I+ Sbjct: 169 QVVPATIQGLQSGNQTLGHRYHSPEPMVIPHAKDYESVLEAAKVIVDFDRRQQLIVEAVQ 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +L+ V E + +DLL+E+ LV+ SF++++L +P+E + T++ +QK F Sbjct: 229 KLSDEVNAEAIVPQDLLDEVTALVDLPVALRASFEERFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI +SNI++ D + +V GN +VV RL DA F+ +DQ Sbjct: 289 DKEGKLQPYFIFISNIESKDP-SQVVSGNEKVVRPRLADAEFFFLQDQK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--------- 404 +PL + L + VF K+GT E+ RI L IA+ + Sbjct: 337 ---------QPLIEMAESLK--NRVFQDKLGTIWEKSERIAKLATFIARQLKEHAIADYA 385 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D +V RA +LSKADL + +V EFPELQG G YA L E + AIEE P+ Sbjct: 386 DIEVEQATRAAMLSKADLTSTLVGEFPELQGVAGTYYARLNGEPETIAAAIEEQYLPKFS 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P I I ++LAD+LDTL+ + I++ P+GSKDP++LRR+ +G++RI++E K+ I Sbjct: 446 GDVLPQTAIGICLALADRLDTLVGIFGIDQAPTGSKDPFSLRRSAIGVLRILIEKKLPIN 505 Query: 525 LSQFIEDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L + +E ++ F + R + ++ I D I+A+L + L Sbjct: 506 LKELVEQAINNYQGKLADESKTLTQVMDFINSRYRAMYTEQGISVDSIQAVLAINSHVPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + ++EF + + KR+ ILA K E+S +++ L EAEK LY Sbjct: 566 DFDQRLHAVSEFRNLPQAATLAEINKRVANILA---KSEGEVSDQVTEDLLAEEAEKTLY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++ + Y++I L ++ P+ FFD V+VN +D ++ NRL+LL+ + Sbjct: 623 QAVTKAEATVAPLQADANYNEILQSLATLEAPLTGFFDNVMVNSEDEALKANRLTLLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V +V ++ Sbjct: 683 RELFLTVADVGEL 695 >gi|146280406|ref|YP_001170559.1| glycyl-tRNA synthetase subunit beta [Pseudomonas stutzeri A1501] gi|166227921|sp|A4VFG6|SYGB_PSEU5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145568611|gb|ABP77717.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Pseudomonas stutzeri A1501] Length = 684 Score = 748 bits (1931), Expect = 0.0, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 345/725 (47%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + K A+ + LK+ G+ + + Y P RL + ++ Sbjct: 1 MSALDFLVELGTEELPPKALAKLADAFCAGIEKGLKDAGLGFAKAQAYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF R G+ + + + G Sbjct: 61 LATQQPDRSINLDGPPMQAAFDAHGEPTQAALGFARKCGVD------LAEIDRSGPKLKF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ +P PK MRW+ ++RP + ++ + Sbjct: 115 SRTIEGQPATQLLPGIVEASLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++ID ++ G + GHRFH+P + + Y+ DL A V+ D RR I Sbjct: 165 GEQVIDCEILAQRAGRESRGHRFHSPGQVHISKPSSYLEDLRGAHVIADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LAS + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VEQLASEQNGSAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDTNGKLLPRFITVANIESKDP-AQIVSGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL++ RL +VVF A++GT ++ R+ L IA+ D A Sbjct: 335 -----------QPLERFNDRLK--NVVFQAQLGTVFDKAERVSRLAGLIAERTGGDKARA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSKADL TE+V EFPE+QG G YA+ + E A+ E PRG +P+ Sbjct: 382 MRAGLLSKADLATEMVGEFPEMQGIAGYYYALNEGEPEDVALALNEQYMPRGAGGELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + + Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLNLVEAVNF 501 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AIGQFGTQVKSAGLADQVLEFIFDRLRARYEDEGVDVAAYLSVRAVQPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + E + KR+ +LA E K + + P++ E LY+ + Sbjct: 562 VQAFRTLPEAEALAAANKRVSNLLAKFEAK---LPEAVEPRWFDNATEFSLYSALQQAEQ 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q ++Y + + L + P++ FF+ VLVN +D VR NR +LL ++ + L V Sbjct: 619 AVQPLAAARQYREALERLAHLRGPVDAFFEAVLVNAEDASVRANRYALLARLRGLFLGVA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISAL 683 >gi|260771056|ref|ZP_05879984.1| glycyl-tRNA synthetase beta chain [Vibrio furnissii CIP 102972] gi|260613945|gb|EEX39136.1| glycyl-tRNA synthetase beta chain [Vibrio furnissii CIP 102972] Length = 688 Score = 747 bits (1930), Expect = 0.0, Method: Composition-based stats. Identities = 206/703 (29%), Positives = 328/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L G+ + + Y TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFTAELNNAGIAHDGVTWYATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQPDKVVEKRGPAVSVAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + Sbjct: 119 EQVKGQDTAAVVVDMAAKALAHLPIAKPMRWGDKET-----QFIRPVKTLTILF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILND 231 + +ID ++ + G I GHRF + S Y LE V+ D E R+ I++ Sbjct: 169 DTLIDGEILGVKSGRIIRGHRFMGEPEFTIDSAAQYPAILLERGKVIADYETRKAMIIDG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+ +G + DL+EE+ LVE+ V F++K+L +P E + T+K +QK F Sbjct: 229 AQKAAAELGGIADLEDDLVEEVTSLVEFPVVLTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F Sbjct: 289 VYDANKHLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFF--------------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 FN DL L R+ +L+ +F K+GT ++ RI L IA+ I ADV Sbjct: 333 -----FNTDLKSKLVDRLPQLETA--IFQQKLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++PTN Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDSLPTN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLSNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARHPTKPADFDRRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRDLDAAEALAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEAVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y Q L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQQALSQLAGLREPVDAFFDNVMVMADDEALKK 664 >gi|312958112|ref|ZP_07772635.1| Glycyl-tRNA synthetase beta subunit [Pseudomonas fluorescens WH6] gi|311287543|gb|EFQ66101.1| Glycyl-tRNA synthetase beta subunit [Pseudomonas fluorescens WH6] Length = 684 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 198/725 (27%), Positives = 338/725 (46%), Gaps = 66/725 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + AE + L G+ ++ + Y P RL + L Sbjct: 1 MSAQDFLVELGTEELPPKALNTLAEAFLAGIEKGLHTAGLKFEAKKVYAAPRRLAVLLTA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP G +A GF + G+ ++ + + G Sbjct: 61 LETQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGV------ELSEIDQSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW ++RP + ++ +L Sbjct: 115 SQVITGKPTASLLPTIVEDSLNDLPIPKRMRWGARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I+ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVIECNILAQKAGRDSRGHRFHHPQSVRITSPASYLNDLRAAYVLADANERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TEELARLQEGTAIVPPSLLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDVDGKLLPRFITVANIESKDP-QQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF K+G+ ++ R+ L IA I D A Sbjct: 335 -----------QKLEDFNLRLQ--NVVFQEKLGSVYDKAVRVSKLAAYIAPRIGGDAAWA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLATEMVGEFPEMQGVAGYYYALNDGEADDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI+++ K+D+ L+Q + Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLTQAVVF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + ++ + + L ++ Sbjct: 502 AVGQFGAKVKQAGLAEQVLEFVFDRLRARYEDEGVDVSVYLSVRALQPASALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KR+ +L+ E + ++ P E L + I+ Sbjct: 562 VQAFRKLPEADALAAVNKRVSNLLSKAEGLG---NADVDPGLFADAKEFSLNSAIAKAEN 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + + Y + L ++ EP++ FF+ V++N +D VR NR ++L ++++ + + Sbjct: 619 AVKPLIAERNYAEALARLATLREPVDAFFEAVMINAEDAGVRKNRYAMLARLRSLFINIA 678 Query: 697 NVQKI 701 ++ + Sbjct: 679 DISTL 683 >gi|167621947|ref|YP_001672241.1| glycyl-tRNA synthetase subunit beta [Shewanella halifaxensis HAW-EB4] gi|189082274|sp|B0TLA9|SYGB_SHEHH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|167351969|gb|ABZ74582.1| glycyl-tRNA synthetase, beta subunit [Shewanella halifaxensis HAW-EB4] Length = 689 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 216/720 (30%), Positives = 349/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + + +P RL + + L+ Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLANFTEELTKAELSFDSAVWHASPRRLAICINQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L R Sbjct: 65 QADKVVEKRGPAIAQAFDADGNPTKAAQGWARGNGISVEQAERLKTD--KGEWLLHQARV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIADMAQRSLDKLPIPKPMRWGSNTT-----QFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ++ +L I + GHRF ++ D+Y+ L E+ VL D + R+ I DA Sbjct: 173 VEGELLGIKSDRVIRGHRFMGESSFELDHADNYLVALKEKGKVLADYQARKAIIKTDAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADLEDDLLEEVTSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F++ D+ Sbjct: 293 NAGQLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFETDKK------------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L+ R+A L+ VVF ++GT +RV RI L IA I+A+ RA Sbjct: 340 --------ESLEARLASLET--VVFQKQLGTIKQRVERISALAGYIATSINANSEEAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT IS Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALAEQYKPKFSGDTVPTAPIS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L I Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + FF R + + D+ + D+I A+L IK + Sbjct: 510 LHGENLTNENVAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFESRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K E+ I + L+ EAEK L A +++ + Sbjct: 570 FRTLEQASALAAANKRVSNILA---KVEGELPAAIDDKLLVEEAEKALAAKLAELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQEALALLASLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 >gi|262166791|ref|ZP_06034528.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus VM223] gi|262026507|gb|EEY45175.1| glycyl-tRNA synthetase beta chain [Vibrio mimicus VM223] Length = 688 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 336/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAKQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLNVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|229515941|ref|ZP_04405398.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TMA 21] gi|229347041|gb|EEO12003.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TMA 21] Length = 693 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 201/728 (27%), Positives = 335/728 (46%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYSHKMGDANKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK---- 343 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ + +F ++GT ++ RI L IA+ I A Sbjct: 344 ----------------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L Sbjct: 446 ELPSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLV 504 Query: 527 QFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I +Q +I F R + D D+I+A+L Sbjct: 505 DLIAKAKSLFGDRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 QRVKAVSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNL 681 Query: 692 ILIVINVQ 699 L + ++ Sbjct: 682 FLQIADIS 689 >gi|153802495|ref|ZP_01957081.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-3] gi|124121965|gb|EAY40708.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-3] Length = 688 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDSSKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|153212966|ref|ZP_01948560.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 1587] gi|124116192|gb|EAY35012.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae 1587] Length = 688 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVASL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFIIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAKEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|221638266|ref|YP_002524528.1| glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides KD131] gi|221159047|gb|ACM00027.1| Glycyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides KD131] Length = 728 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 269/752 (35%), Positives = 398/752 (52%), Gaps = 77/752 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + + D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDRLETRAD-KKGAVLFAVVEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW T + W+RPL+SILC+L +++ +++ + L Sbjct: 119 PEIVAEVLERTIRTFPWPKSMRWGTG-----SLRWVRPLQSILCLL-SDEGGAEVVPMTL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T GHRF AP V D Y L A V+LD R AI ++A A A G Sbjct: 173 DGLTAGNSTEGHRFMAPARFAVSGFDDYRAKLARAFVMLDASEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG+ + +L LP E+++ +++ +QK F Sbjct: 233 LEVVPDAALLSEVAGLVEWPVVLMGAIGEDFLGLPPEVLQTSMREHQKFFSVTNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D G I++GN +V++ARL DA FW+ D + Sbjct: 293 EKFVTVANRETADHGETILKGNGKVLSARLSDARFFWENDLRTVKTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ L V FH ++G+Q +R++RI L ++IA L+ A L A ++KA Sbjct: 341 ----LEGMAEGLK--QVTFHNRLGSQADRIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA + A + H +P GP + VPT+ +S V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGTYYARAAGLPEAVAQACKAHYQPLGPSDAVPTDPVSGAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID------------------ 522 DK+DTL FWAI+EKP+GSKDP+ALRRA LG++R+ LEN++ Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVVRLNLENELRYSLKLLLLDGLVANEIAR 514 Query: 523 --------------------------IPLSQFIEDQNL-----ILFFHDRLKLYLHDRDI 551 L + N + FFHDRLK++L ++ I Sbjct: 515 QFTHFKSETNALAGIDDVEAFKQHVTFSLDAAKDKANDLFEYLLAFFHDRLKVHLREQGI 574 Query: 552 RHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-E 609 RHD+I+A L P ND+L +V + L+ F + G L KR IL E K+ E Sbjct: 575 RHDVIDACLAMPGNDDLTLLVKRAEALSGFLKTDDGTNLLQGFKRANNILTQAEAKDGVE 634 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 S P++ +AE+ L++ + I ++ + + + ++ PI+ FF+ V Sbjct: 635 YSFGADPKFAETDAERALFSALETAEAAIGPALQAEDFAAAMSAMAALRAPIDAFFETVQ 694 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN D+ +R NRL++L I+ V ++ +I Sbjct: 695 VNADNAVLRRNRLNMLHSIRATCARVADLTRI 726 >gi|229520192|ref|ZP_04409619.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TM 11079-80] gi|229342786|gb|EEO07777.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae TM 11079-80] Length = 693 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 201/728 (27%), Positives = 335/728 (46%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 TESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVDMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEPEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYSHKMGDANKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK---- 343 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ + +F ++GT ++ RI L IA+ I A Sbjct: 344 ----------------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L Sbjct: 446 ELPSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLV 504 Query: 527 QFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I +Q +I F R + D D+I+A+L Sbjct: 505 DLIAKAKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 QRVKAVSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNL 681 Query: 692 ILIVINVQ 699 L + ++ Sbjct: 682 FLQIADIS 689 >gi|254784294|ref|YP_003071722.1| glycyl-tRNA synthetase subunit beta [Teredinibacter turnerae T7901] gi|237687492|gb|ACR14756.1| glycyl-tRNA synthetase, beta subunit [Teredinibacter turnerae T7901] Length = 686 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 197/720 (27%), Positives = 344/720 (47%), Gaps = 59/720 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+E+ +EE+P + + + L ++ + + ++ Y TP RL + + GL+ + Sbjct: 3 FLVELGTEELPPTALKTLSHAFTQGIQDGLTQKNLGFDSVESYATPRRLAVSVTGLADKT 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P++ + GP GA KA + F R G+ + Q D K + + Sbjct: 63 PQESVKIFGPPAQVAFKDGAPTKAAEAFARKNGIA-LEALQTGMD-GKVEKLVYETTAGG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 D+L +V ++ +P K MRW S ++RP+ ++ + A +K++ Sbjct: 121 EATVDLLADLVAQSLANLPIAKRMRWGA-----SRTEFVRPVHWLVML-----ADDKVLP 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLA 236 ++ + GN T GHRFH PI ++ + Y L E V+ R+ I+ + A Sbjct: 171 AEILGLTSGNETRGHRFHYNQPITLKHANQYAAALAETGHVVASFSERQAMIVKQVNTAA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +G V D DLL+E+ LVE+ G+F+ ++L +P E + ++K +QK F + Sbjct: 231 DKLGGTAVIDADLLDEVTALVEYPVALAGNFENEFLNVPSEALISSMKEHQKYFHVVDND 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI ++NI + D A ++ GN RV+ RL DA F++ D+ Sbjct: 291 GELLPHFITIANIVSQDP-AQVIDGNERVIRPRLSDAKFFFETDKQ-------------- 335 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L+ R +L VVF AK+GT ++ RI L IA + + A V RA Sbjct: 336 ------TSLEARREKLKT--VVFQAKLGTIYDKTERIGKLATLIAARLGENEATVKRAAE 387 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L K+DL + +V EF +LQG G YA E+ A+ E P+ +++P Sbjct: 388 LCKSDLVSTMVYEFTDLQGIAGYHYANNDGEDAEVAQAMVEQYMPKFAGDDLPATATGTI 447 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---- 532 ++LAD+LDT+ + I +KP+GSKDP+ALRRA++G +R+++E K+D+ L I Sbjct: 448 IALADRLDTITGIFGIGQKPTGSKDPFALRRASVGALRLMVEKKLDLDLRDLINAAADSF 507 Query: 533 ----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 +++ + +R + + + I ++ A+ + N L I + + + EF Sbjct: 508 TALPNAQVVDDVLAYMLERFRAWYEEASIPAEVFMAVSAKQLSNPLDINNRVYAVAEFSK 567 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 A+ + + KR+ ILA K + + E+ L AEK+L ++ + + + Sbjct: 568 LAEAQALAAANKRVSNILA---KLDSAPASEVDAALLTDGAEKQLADALASYAAQARPLL 624 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y +L + ++ FFD V+V DD VR+NRL+LLQ ++++ L V ++ + Sbjct: 625 AEANYTDALKVLAGLRATVDTFFDDVMVMTDDMAVRNNRLALLQSLRDLFLEVADISLLA 684 >gi|315178617|gb|ADT85531.1| glycyl-tRNA synthetase, beta chain [Vibrio furnissii NCTC 11218] Length = 688 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 205/703 (29%), Positives = 328/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L G+ + + Y TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFTAELNNAGIAHDGVTWYATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQPDKVVEKRGPAVSVAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + Sbjct: 119 EQVKGQDTAAVVVDMAAKALAHLPIAKPMRWGDKET-----QFIRPVKTLTILF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILND 231 + +ID ++ + I GHRF + S Y LE V+ D E R+ I++ Sbjct: 169 DTLIDGEILGVKSDRIIRGHRFMGEPEFTIDSAAQYPAILLERGKVIADYETRKAMIIDG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+ +G + DL+EE+ LVE+ V F++K+L +P E + T+K +QK F Sbjct: 229 AQKAAAELGGIADLEDDLVEEVTSLVEFPVVLTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI VSNI++ + +++GN +VV RL DA F Sbjct: 289 VYDADKHLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFF--------------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 FN DL L R+ +L+ +F K+GT ++ RI L IA+ I ADV Sbjct: 333 -----FNTDLKSKLVDRLPQLETA--IFQQKLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++PTN Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDSLPTN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLSNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARHPTKPADFDRRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRDLDAAEALAAANKRVGNILA---KFDGELAQEIDLALLQEDAEKALAEAVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y Q L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQQALSQLAGLREPVDAFFDNVMVMADDEALKK 664 >gi|254225550|ref|ZP_04919159.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V51] gi|125621870|gb|EAZ50195.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae V51] Length = 688 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 ADSQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAIALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|261213255|ref|ZP_05927537.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC341] gi|262402073|ref|ZP_06078637.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC586] gi|260837529|gb|EEX64232.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC341] gi|262351719|gb|EEZ00851.1| glycyl-tRNA synthetase beta chain [Vibrio sp. RC586] Length = 688 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 201/723 (27%), Positives = 336/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTIRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|332980880|ref|YP_004462321.1| glycyl-tRNA synthetase subunit beta [Mahella australiensis 50-1 BON] gi|332698558|gb|AEE95499.1| glycyl-tRNA synthetase, beta subunit [Mahella australiensis 50-1 BON] Length = 688 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 217/728 (29%), Positives = 360/728 (49%), Gaps = 67/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EEIPA + + + ++ + Y++MR Y TP R+ L K ++ Sbjct: 1 MNTFLLEIGCEEIPAHFMPDILDQMEQKGKAIFEQYRLPYKDMRAYGTPRRIVLIAKDVA 60 Query: 61 PHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 H + + GP A KA+ GF+RS + + D I + VY + Sbjct: 61 RHQQDVEQLVKGPAKKAAYGDDGQPTKALLGFMRSQNVS-VEDLIIDEINGIPYVYAHKV 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + LK I P I + +PKSMRW ++RP++ I +L + Sbjct: 120 QR-GMQASEALKGIAPQLISTLSFPKSMRWGDMD-----IRFVRPIRWIASLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I D+ IP G + GHRF + + D+YI +E+ V++D R++ I Sbjct: 169 EVISFDMGGIPSGRYSRGHRFLGQPEVAIDRADNYIAIMEQQFVIVDQHRRKDMISRQIK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G ++D DLLEE++ LVE+ F+G+FDKKYL LP+E++ +K +Q+ F + Sbjct: 229 ELADKTGGTALQDPDLLEEVVYLVEYPTAFLGNFDKKYLDLPKEVVITPMKDHQRYFPVK 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V N +D + +GN +V+ ARL+DA F++ D Sbjct: 289 DDTGALMPYFIGVRNG-TTDYIDVVREGNEKVLRARLDDAKFFFEEDIK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL--- 410 +PL+QR+ L +VFH +GT ++ R+R L + I Q + + + Sbjct: 337 ---------RPLEQRVEELK--GIVFHDGLGTLYDKTMRLRNLCRYIGQRLGLNEDMLSC 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +DRA LS+ADL T++V EF ELQG +G+EY++LQ E AI E PR ++++P Sbjct: 386 LDRAAYLSRADLVTDMVNEFDELQGIMGREYSILQGEPKPVAQAIYEMYLPRTAVDDLPD 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I +SLADKLDTL +++I +P+GS+DPY LRR LGI R+I E +I I L + Sbjct: 446 TVIGTAISLADKLDTLCGYFSIGLQPTGSQDPYGLRRQALGICRMIYEKEISISLRDAVM 505 Query: 531 DQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ F R++ L D + +D+++A + + D++ + Sbjct: 506 HSLELYDLDDENRRKTFNEVLDFIKQRVRSMLIDDGLSYDVVDAAIAADFDDICEVRRRA 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K + ++ + + E F+ + R + A + SL + +E +L+ D Sbjct: 566 KIIAQWKARSDFEDFMTAFNRPNNLAAKTD------SLFVDESLFSDSSESKLWQAYKDA 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E++ Y + ++L + ++ FFD VLV V+D +R NRL++L+ I + Sbjct: 620 KELLNEALAAWDYDRAYEILKGLKPAVDEFFDAVLVMVEDPAIRANRLAILKNIAELFKA 679 Query: 695 VINVQKIV 702 + + IV Sbjct: 680 IGDFSYIV 687 >gi|297581946|ref|ZP_06943866.1| glycyl-tRNA synthetase [Vibrio cholerae RC385] gi|297533813|gb|EFH72654.1| glycyl-tRNA synthetase [Vibrio cholerae RC385] Length = 693 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 201/728 (27%), Positives = 335/728 (46%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELATADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYSHKMGDANKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK---- 343 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ + +F ++GT ++ RI L IA+ I A Sbjct: 344 ----------------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L Sbjct: 446 ELPSRGVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLV 504 Query: 527 QFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I +Q +I F R + D D+I+A+L Sbjct: 505 DLIAKAKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 QRVKAVSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNL 681 Query: 692 ILIVINVQ 699 L + ++ Sbjct: 682 FLQIADIS 689 >gi|84683642|ref|ZP_01011545.1| glycyl-tRNA synthetase beta subunit [Maritimibacter alkaliphilus HTCC2654] gi|84668385|gb|EAQ14852.1| glycyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2654] Length = 742 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 277/765 (36%), Positives = 404/765 (52%), Gaps = 90/765 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+E++SEEIPARMQ +AAEDL ++ L E G+ Y + TP RL L L L Sbjct: 1 MADLLIELFSEEIPARMQGRAAEDLKKLVTDGLVEAGLTYGGAAAFATPRRLCLTLTDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GPR A + A++GFLRSTGL D +D KKG + AV+ K R Sbjct: 61 AMSPDTREERKGPRTDAPETALEGFLRSTGLT--KDQLEARDEKKGQAWYAVIAKKGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW + W+RPL SILCIL +++ +++ LD+ Sbjct: 119 ADIVAEVLERTIRNFPWPKSMRWGAG-----SLKWVRPLHSILCIL-SDEGGAEVVPLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP P KV S D Y L++A V+LDP R I +DA + A A G Sbjct: 173 DGIAAGDTTQGHRFMAPGPFKVSSFDDYQAKLKKACVVLDPAERAETIWHDAEQAAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ELVEDK LL E+ GLVEW V MG ++ LP E+++ ++K +QK F + + Sbjct: 233 FELVEDKGLLSEVAGLVEWPVVLMGDIGADFIDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V+AARL DA FW+ D + S Sbjct: 293 EKFVTVANRETADDGATILAGNQKVLAARLSDAKFFWENDLRTVAQHGMTSMS------- 345 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH ++G+Q ER+ RI L ++IA ++ A+ A ++KA Sbjct: 346 -----------ESLTNVTFHRELGSQSERIDRIAALARRIAPMVGAEPDEAVLAAKVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + + DA +H P GP ++VPT +S+ V+LA Sbjct: 395 DLASEMVYEFPELQGIMGRYYAKRAGLSDAVADACRDHYSPLGPSDDVPTAPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + Q Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLANDLRLNLDPVFDMQLLRLKGAR 514 Query: 533 ---------------------------NLILFFHDR------------------------ 541 ++ F DR Sbjct: 515 EAALPNDGVAMMIDEIADHGVFAAALETVLDAFKDRDGAEALAGLKTAVPDLSDDLLAFF 574 Query: 542 ---LKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 LK++L D IRHD+I+A L P ND+L +V + L F ++ G KR Sbjct: 575 HDRLKVHLRDEGIRHDVIDACLNMPGNDDLTLLVKRARALAAFLATEDGANLTQGFKRAN 634 Query: 598 QILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL E+K+ E S ++ EK L+A + ++ +M+ + + ++ Sbjct: 635 NILTQAEEKDGVEYSFGADVKFAEAAEEKALFAALDSAAAPLKTAMEAEDFAGAMSVMAD 694 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FF+ V +N +++ VR NRL+LL I++I + V ++ +I Sbjct: 695 LRAPIDAFFEAVQINTENQIVRRNRLNLLARIRDICMSVADLTRI 739 >gi|110679234|ref|YP_682241.1| glycyl-tRNA synthetase subunit beta [Roseobacter denitrificans OCh 114] gi|109455350|gb|ABG31555.1| glycyl-tRNA synthetase, beta subunit [Roseobacter denitrificans OCh 114] Length = 728 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 271/753 (35%), Positives = 388/753 (51%), Gaps = 79/753 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++ EEIPARMQ +AA+DL ++ L E G+ Y + + TP RL L L+G+ Sbjct: 1 MPDLLIELFCEEIPARMQRRAAQDLQKLVTDGLVEAGLTYASAAAFSTPRRLTLTLEGVL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A KAI+GFLR G+ + +D KG V A + K R Sbjct: 61 AASPTTVEERKGPKADAPDKAIEGFLRGAGVAREALET--RDTPKGPVLFAKITKEGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW W+RPL SILCIL +++A +++ L + Sbjct: 119 AQIVAEVLEKTIRNFPWPKSMRWGAG-----TLRWVRPLHSILCIL-SDEAGTQVVPLSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V D Y L+ A V+LDP R + I +DA A A G Sbjct: 173 DHITAGDHTQGHRFMAPDRFTVTGFDDYAAKLKRAFVVLDPAERADMIWHDATNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAALLAEVAGLVEWPVVLMGRIGDDFLDLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW D AL+ Sbjct: 293 ERFVTVANRDTADNGATILAGNEKVLSARLADAKFFWDNDLRVAKAGMGDWLKALE---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+GTQ ER++R+ L +++A ++ AD + A +KA Sbjct: 349 ---------------NVTFHNKLGTQAERIARVAALARELAPMVGADSDEAEEAARFAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y ++ + A EEH P GP + VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYLKAAGKSDAIAAAAEEHYAPLGPSDAVPTASVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL------ 534 DKLD WA NE P+GSKDPYALRRA L IR+ILEN++ +PL +E Sbjct: 454 DKLDQFTGMWAANELPTGSKDPYALRRAALSTIRLILENRLKLPLKNLLEISFSDRYEIA 513 Query: 535 --------------------------------------------ILFFHDRLKLYLHDRD 550 FFHDRLK+YL D+ Sbjct: 514 KLEVKRSVERVAHRYPTEKAELKKILEEELLKISSTVDTRKNGLSEFFHDRLKVYLRDQG 573 Query: 551 IRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR- 608 IRHD+I+A + P ND+L +V K L++ + GE + KR IL ++ + Sbjct: 574 IRHDVIDACIAMPGNDDLTLLVKRAKALSDVVGTEDGENLIQGFKRANNILTQAQEADGV 633 Query: 609 EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 E S ++ + E+ L+ + I +M + + + ++ PI+ FF+ V Sbjct: 634 EYSYGADAKFAETDEERALFKALDTAEAIITPAMKSEDFATAMSAMATLRAPIDAFFEAV 693 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN D+ VR NRL+LL I I L V ++ +I Sbjct: 694 QVNSDNPTVRRNRLNLLNRITQICLSVADLTRI 726 >gi|254428435|ref|ZP_05042142.1| glycyl-tRNA synthetase, beta subunit [Alcanivorax sp. DG881] gi|196194604|gb|EDX89563.1| glycyl-tRNA synthetase, beta subunit [Alcanivorax sp. DG881] Length = 690 Score = 745 bits (1924), Expect = 0.0, Method: Composition-based stats. Identities = 213/724 (29%), Positives = 346/724 (47%), Gaps = 63/724 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L+E+ +EE+P + + L+ + L E G+ + N+ ++ P RL L ++ L Sbjct: 1 MSRDLLIELGTEELPPKALASLSAALTDEFVRQLDEAGLNHGNVERFAAPRRLALLVRDL 60 Query: 60 SPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 ++ ER GP V A KA GF S GL D ++D KG+ +A Sbjct: 61 DEKQADRDIERQGPAVQAAFDSDRNPTKAAQGFAASLGLTV--DQLGRQDTGKGERLVAQ 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + +++ AIQK+P PK MRW ++RP ++ + Sbjct: 119 ITEKGKSAAELVPAFFTQAIQKLPIPKRMRWGKRK-----VQFVRPAHWLVALF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +++I +L ++ G +YGHRFHAP I + + Y + +E+ VL D + R+ I Sbjct: 169 DEVIPFELLDLQSGRTSYGHRFHAPGAIDLATAGEYAQRIEQDGHVLADFDRRKAMIEEQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 G D DLL E+ LVEW + MGSFD +L +P+E + ++ +QK F Sbjct: 229 TLAAGKKAGGVAQIDPDLLNEVTALVEWPEALMGSFDDDFLRVPQEALISAMEEHQKYFS 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI +SNIQ+ D ++ GN +V+ RL DA F+ D Sbjct: 289 VLDADGKLMPRFITISNIQSKDP-QQVIHGNEKVIRPRLADAAFFYDND----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L Q L +VVF ++GT ++ RI L IA I + Sbjct: 337 ---------CKRTLAQHAEGL--ANVVFQQQLGTVADKCQRIGSLAAVIAGQIGGNADNA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A LSKADL +E+V EF +QG +G A + + A+ E PR + +P + Sbjct: 386 KLAGELSKADLNSEMVGEFDTMQGIMGFYLAQREGQPDDVAKALYEQYLPRFAGDTLPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K + VSLADK+DTL+ + I +KPSG+KDPYALRRATLG++RII+EN++ + L + Sbjct: 446 KTGMAVSLADKIDTLVGIFGIGQKPSGTKDPYALRRATLGVLRIIIENELALDLRELLDQ 505 Query: 529 -----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE--NDNLLTIVDLIK 575 + ++ F R + ++ I +I ++L + L +K Sbjct: 506 AAAQLGERIDANQVEDAFDFIKGRYRAIYQEQGIATPVILSVLAIDEACRKPLDFDRRVK 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ ILA K + EI L EAE+ L ++ Sbjct: 566 AVAAFQQREEAQALAAANKRVSNILA---KLDSAPPEEIDGALLEDEAEQTLTNMVVAAF 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 E ++ Y + ++L + EP++ FFD V+V +D VR+NRL+LL +++++ L V Sbjct: 623 EQSYELLEAGDYASVLEMLADLREPVDAFFDTVMVMAEDEAVRNNRLALLAFLRDLFLNV 682 Query: 696 INVQ 699 ++ Sbjct: 683 ADIS 686 >gi|86748220|ref|YP_484716.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris HaA2] gi|86571248|gb|ABD05805.1| glycyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris HaA2] Length = 760 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 306/768 (39%), Positives = 425/768 (55%), Gaps = 77/768 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + I+KDPKKGD Y+A++ KP + Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEATIQKDPKKGDFYVALIEKPGKPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ + + ++ D+ Sbjct: 121 IDVLAEILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIVATFGIDTEEPDVVAFDI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V+ + Y L A V+LDP+ RR+ IL DA LA A Sbjct: 181 SGIQAGQVTRGHRFMAPDEISVRRFEDYEAKLYAAKVVLDPQRRRDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED+ LL+E+ GLVEW MGSFD+ +L +P E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDEAFLSIPGEVIRATIRANQKCFVVSDPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA HFW+ D +LP ++ Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDARHFWETDHKSLP----------EYRD 350 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 +PLDQR+ ++ +VFHA +GTQGER+ RI L ++IA L+ AD RA L+K Sbjct: 351 SGLRPLDQRLKKIRDQKIVFHASLGTQGERIDRIIRLAREIAPLVGADPDKAARAAELAK 410 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 411 ADLVTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVAL 470 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ---FIEDQNLIL 536 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++++N I + L + IE + IL Sbjct: 471 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLVDNGIRMHLQRKSLLIEMRFRIL 530 Query: 537 FFHDRLKLYLHD-----------------------------RDIRHDLIEAILRPENDNL 567 R + + + ++ + + L Sbjct: 531 GALARERGFTKQLTSTLDILNSDKDHASLEVELISSLERSIEGLYSEIFAKADAAQLNLL 590 Query: 568 LTIVDLIKH-----------LNEFFSSAKGEKFLLSAKRI-------------------- 596 D +K ++ F+ + L+ +R+ Sbjct: 591 SFFADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLLAGTK 650 Query: 597 --FQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDL 653 IL IEEKK+ R + EK L A I E++ + + Sbjct: 651 RAANILRIEEKKDGRAFDGAPDASLYAQDEEKALAAAIDRARAEATEAVAREDFAAAMTA 710 Query: 654 LHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ FF+ V VN DD+ VR+NRL LL I+ V + KI Sbjct: 711 MAGLRPAVDAFFEHVTVNADDKSVRENRLKLLNEIRAATRAVADFSKI 758 >gi|119475258|ref|ZP_01615611.1| Glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2143] gi|119451461|gb|EAW32694.1| Glycyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2143] Length = 697 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 201/725 (27%), Positives = 349/725 (48%), Gaps = 62/725 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+EI +EE+P K + + + +K G+ Y ++ Y TP RL + + GL Sbjct: 8 HDFLVEIGTEELPPTALLKLSNSFTAQVAAGIKTAGLSYTGVQSYATPRRLAIVVSGLDS 67 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRS--------TGLQTISDCQIKKDPKKGDVYLAVL 113 +PEK GP DG G+ I D I+ D K + + Sbjct: 68 QTPEKDVIVWGPPKKIAFD-ADGKPTKAAAAFAKKNGVG-IDDINIEND-GKAEKLVYKS 124 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K ++L +I+ A+ K+P K MRW + ++RP++ I+ + Sbjct: 125 LKAGISATELLPSIIQDALDKLPIAKRMRWGAERT-----EFVRPVQWIVMM-----QGS 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 II+ + GN T GHRFH + +++ Y LE ++ E R+ I Sbjct: 175 HIIECSILGFSAGNTTRGHRFHCDTTLAIENPAAYATLLEHSGHIVPAFETRKAMIRQQV 234 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +G V D+DLL E+ GLVEW GSF+ ++L +P E + ++K +QK F Sbjct: 235 VAEGEKLGGAAVIDEDLLNEVTGLVEWPVALTGSFENRFLEVPPEALISSMKEHQKYFHV 294 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L FI VSNI + D + +++GN RV+ RL DA F++ D+ Sbjct: 295 ENKDGYLMPHFITVSNIVSRDP-SQVIRGNERVIRPRLSDAAFFFETDKKIA-------- 345 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L+ R+ +L +VF A++GT ++ R+ L IA I ++ A Sbjct: 346 ------------LETRVEKLK--SIVFQAQLGTLYDKTQRMMGLAASIADSIGSNRAYAS 391 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL +++V EF ++QG G+ YA+ Q E +AI + P+ + +P + Sbjct: 392 RAAELSKADLVSDMVLEFDKMQGIAGRYYALAQGEEEEVANAIRDQYLPKFSGDQLPESL 451 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 ++LAD+LDT++ + I + P+GSKDP+ALRRATLG++RII+E ++ + L ++ Sbjct: 452 TGCAIALADRLDTIVGIFGIGQPPTGSKDPFALRRATLGVLRIIVEKRLPLDLRVLLKQA 511 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ + +R + + + I ++ ++ L I +K + Sbjct: 512 QQQYSHLSAGENLVETVLQYMTERFRAWYEEEQINAEVFMSVSEKGLSQPLDIDQRVKAV 571 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 N F + + + KR+ ILA + + S + L+ ++EK L ++ Sbjct: 572 NRFSMLPEAQALAAANKRVSNILAKLDSQAAIGS--VDNTLLVEDSEKNLAELVEQKAQQ 629 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + +++Y + L + PI+ FFD V+V VD+ V++NRL+LL+ ++++ L V + Sbjct: 630 LAPLFANRQYSEALTSLAELRVPIDAFFDNVMVMVDEESVKNNRLALLKSLRSLFLEVAD 689 Query: 698 VQKIV 702 + +V Sbjct: 690 ISLLV 694 >gi|330831645|ref|YP_004394597.1| glycyl-tRNA synthetase subunit beta [Aeromonas veronii B565] gi|328806781|gb|AEB51980.1| Glycyl-tRNA synthetase beta subunit [Aeromonas veronii B565] Length = 689 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 209/721 (28%), Positives = 339/721 (47%), Gaps = 61/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI + E+P + AE + L + + + ++ + +P RL L + L+ Sbjct: 4 HTFLVEIGTAELPPKALRSLAEAFADNFKAELTKADLAFGDVEWFASPRRLALKVSELAG 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 64 EQPSKSVEKRGPAVAQAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHTAK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +D+L +V A+ K+P PK MRW ++RP+ ++ +L + Sbjct: 122 VEGRPAKDLLGELVSQALAKLPIPKMMRWGDK-----TIQFVRPVFTVTLLLDGD----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ + I GHRF + + Y + L E MV+ D R+ I D Sbjct: 172 LVPAHILGIDSARTIRGHRFMGESEFTIDNASQYPQILQERGMVIADFMARKAKIKADVE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A G D LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 232 AAAAAFGGVADLDDALLEEVTALVEWPVVLTANFEEKFLAVPAEALVHTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V+NI++ D + I+ GN +VV RL DA F+K D Sbjct: 292 DKSGKLLPKFIFVTNIESKDP-SQIISGNEKVVRPRLSDAEFFFKTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L + L R+ RL+ V+F ++GT +V RI + IA+ I ADVA R Sbjct: 338 -------LKQTLASRLPRLET--VLFQQQLGTVKAKVERIETVAGFIAERIGADVAQAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ + A+ E PR + +P+ + Sbjct: 389 AGLLSKCDLMTNMVGEFTDTQGVMGMHYARHDGEDEAVAVALNEQYMPRFAGDALPSGLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + V+LADK DTL + I P G KDP+ALRRA +G +RI+ E ++D+ L + +E+ Sbjct: 449 ACAVALADKFDTLAGIFGIGMLPKGDKDPFALRRAAIGALRIMTEKQLDLDLVELVEEAV 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + D I D++ A+L L +K ++ Sbjct: 509 RVYGDKLTNKTVVTDVVDFMLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + KR+ ILA K E+ + P+ L+ AEK L +++ + Sbjct: 569 HFRTLDAALALAAANKRVSNILA---KVEGELPTAVKPELLVDAAEKALATQVAELQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y L ++ EP++ FF++V+V DD ++ NRL+LL ++N+ L V ++ Sbjct: 626 APLFAAGDYQAALTRLAALREPVDTFFNEVMVMADDEALKANRLALLNNLRNLFLQVADI 685 Query: 699 Q 699 Sbjct: 686 S 686 >gi|289423934|ref|ZP_06425727.1| glycyl-tRNA synthetase, beta subunit [Peptostreptococcus anaerobius 653-L] gi|289155711|gb|EFD04383.1| glycyl-tRNA synthetase, beta subunit [Peptostreptococcus anaerobius 653-L] Length = 687 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 220/726 (30%), Positives = 370/726 (50%), Gaps = 65/726 (8%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R + L L L+E+ V ++++ + TP RL L +KGL Sbjct: 1 MNNYLLYEIGVEEMPSRFVQSTLDQLVSGLKSRLEEKRVAFEDIDTFATPRRLILVVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G+ KA GF+R GL SD K D + A Sbjct: 61 ADRQADLEEEVKGPAKKISIAEDGSFTKAAQGFMRGKGLS-ESDVYFK-DLNGTEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +R+ + ++VL ++P ++ V +PKSMRW + ++RP++ ++ + Sbjct: 119 IREEGKDTDEVLMEVLPEIVKSVVFPKSMRWGGKN-----MRFVRPIRWLVAL-----HN 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K++ +DL+ I N+T GHRF I+V S++ Y + LEE V+ D + R++ I Sbjct: 169 DKVVPVDLEGIIASNVTVGHRFLGAKSIEVSSIEDYFKKLEENFVVYDQDLRKDMIRKQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++A+++G ++ D++LL+E+ +VE+ F G FDK Y LP+E+++ +K +Q+ F Sbjct: 229 DQVAASIGGKVEMDEELLDEVTYIVEYPTAFYGEFDKSYTELPKEVVKTPMKAHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + L FI V N + GN +V+ ARL DA F+ D+ + Sbjct: 289 VGEDSNLLPYFIAVRNGN-DYKIENVKAGNEKVLEARLADAKFFFNEDRQHDLEYY---- 343 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 R + VVF K+GT ++ RI + K + +D ++ ++ Sbjct: 344 ------------------RNKLNTVVFQEKLGTLLDKSERIYNIAKVYGKEVDVNIEDLE 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A +KADL T +V EF ELQG +G +Y+ L+ +N + AI EH PR + VP+ Sbjct: 386 SAAYYAKADLVTNMVFEFDELQGYMGMQYSRLEGKNDTVSKAIYEHYMPRFNGDTVPSTM 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 +S+ DK+DT+ F+AI +P+GS DP+ALRR +GI+ I+LE I+I +++ Sbjct: 446 EGAILSIIDKMDTIAGFFAIGIQPTGSADPFALRRQCIGILTILLEKNIEIDVARLASIS 505 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +N+I FF++R K D IR+D++EA+L + N+ + + Sbjct: 506 LDQYSSVEFDKDSVIENIIEFFNERTKNMFKDMGIRYDVVEAVLASDEKNISDLYVRAEA 565 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 +N++ L++ R+ + E + +I LL + EK LY D + Sbjct: 566 MNKWIDRDSLTDMLVAFNRVSNLAEGAE------TDKIDQALLLEDVEKELYDNFKDVDS 619 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 I + MD K Y + D S+ ++ FFD V+V DD ++R NRL+LL+ I + +L V Sbjct: 620 KISDLMDQKEYTKSLDAFASLKPAVDNFFDNVMVMSDDPKLRANRLALLKNISDSMLKVC 679 Query: 697 NVQKIV 702 ++ KIV Sbjct: 680 DLTKIV 685 >gi|210623879|ref|ZP_03294114.1| hypothetical protein CLOHIR_02065 [Clostridium hiranonis DSM 13275] gi|210153305|gb|EEA84311.1| hypothetical protein CLOHIR_02065 [Clostridium hiranonis DSM 13275] Length = 689 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 221/727 (30%), Positives = 359/727 (49%), Gaps = 67/727 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L E+ EE+P+R + + +L E+ V ++N+ + TP RL + GL Sbjct: 1 MNNYLLFEVGVEEMPSRFVASTLKQIKESTEKMLNEKRVKFENIETFATPRRLTFIINGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G K GF+RS GL D K+ K + A Sbjct: 61 AERQEDLEEEVKGPSKKISLDADGNFTKPAQGFMRSKGLNP-EDIYFKE-VGKDEYLFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +R+ +VLK I+P+A++ V +PK+M W+ ++RP++ ++ +L Sbjct: 119 IRENGAETAEVLKEILPLAVKSVVFPKAMHWAGKD-----IRFVRPIRWLVALL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ +DL+ I N+T GHRF I V S++ Y L E V+LD R+ I+ A Sbjct: 169 DEVLPVDLEGIIASNVTKGHRFLGAKEIVVNSVEDYKAKLRENYVILDQAERKAMIVEQA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +++A ++G +++ D DLL+E+ +VE+ F G FDK+YL LP+ ++ ++ +Q+ F Sbjct: 229 NKVAESLGGKVIMDPDLLDEVTCIVEYPTAFYGEFDKEYLKLPKRVVITPMQDHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI V N + G + GN +V+ ARL DAL F++ D Sbjct: 289 EDADGNLLPNFIAVRNGDSF-GIENVKAGNEKVLEARLADALFFYREDTK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 K L+ RL VVF K+GT ++ RI L IA + D Sbjct: 338 ----------KNLESYKERLKT--VVFQEKLGTIYDKSERITKLSAVIADSLGCADKKAD 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L KADL T +V EF ELQG +G EY+ L+ EN + AI EH P VP Sbjct: 386 IVRAAELCKADLVTNMVFEFDELQGYMGMEYSKLEGENPAVSQAIYEHYMPVSAGAEVPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + VS+ADKLD++ F+AI +P+GS+DP+ALRR LGI+ I++ENKI I + + E Sbjct: 446 SLEGSVVSIADKLDSIAGFFAIGIQPTGSQDPFALRRQALGILNILMENKITIDIKEISE 505 Query: 531 DQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ F +R+K D IR+D++EAIL + +++ + Sbjct: 506 AALDNYTELEFNKEEVVGQMLDFCSERIKNLFKDMGIRYDVVEAILNADINDIADMHHRA 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LNE+ + + + L + R+ + E N + L+ EK LY Sbjct: 566 LELNEWINKDELVEMLTAFNRVSTLAEKAEGVN------VDEALLVEAPEKELYESFKSV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + +K Y + D ++ ++ FD V+V D VR+NRL++L+ I + +L Sbjct: 620 KEEVKGHLANKDYGKALDSFATLKPAVDNMFDNVMVMDKDDNVRNNRLNMLKNISDTMLT 679 Query: 695 VINVQKI 701 + ++ KI Sbjct: 680 ICDLNKI 686 >gi|157373155|ref|YP_001471755.1| glycyl-tRNA synthetase subunit beta [Shewanella sediminis HAW-EB3] gi|189082276|sp|A8FP54|SYGB_SHESH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157315529|gb|ABV34627.1| Glycine--tRNA ligase [Shewanella sediminis HAW-EB3] Length = 689 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 208/720 (28%), Positives = 346/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE LK+ + +++ + P RL + + L+ Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLSNFTDELKKAELSFESAVWHAAPRRLAICVNQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP + G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAIAQAFDTDGNPTKAAMGWARGNGITVEQAGRLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIAAMAQRSLDKLPIPKPMRWGNNTT-----QFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ++ +L I GHRF ++ D+Y+ L E+ V + E R+ I A Sbjct: 173 VEGELLGQKSARIIRGHRFMGKASFELVHADNYLSALKEQGKVEANYEVRKALIKAGAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADLEDDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++ D I+ GN RVV RL DA F++ D+ + Sbjct: 293 KAGQLMPNFIFVTNIESKDP-QQIIAGNERVVRPRLADAEFFFETDKKD----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT +RV+RI + IA IDA+ RA Sbjct: 341 ---------SLESRLTSLET--VIFQKQLGTIKDRVARISDMAGFIANSIDANADEAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A++E KP+ + VPT +S Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVALALQEQYKPKFSGDTVPTAPVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 + V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RI +EN + + L I Sbjct: 450 VCVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRICVENNLPLNLIDLIAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + FF R + + D+ + D+I A+L + IK ++ Sbjct: 510 LHGSNLTNDKAAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTSPADFDSRIKAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + + KR+ ILA K E+ I L+ AEK L +++ + Sbjct: 570 FRSLEQASALAAANKRVSNILA---KVEGELPAAIDAGLLVENAEKVLAEKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL + E ++ FF+ V+V DD +++NRL+LL ++ L ++ Sbjct: 627 PLFAAANYQEALALLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADIS 686 >gi|153826405|ref|ZP_01979072.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-2] gi|149739791|gb|EDM53986.1| glycyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-2] Length = 688 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 202/723 (27%), Positives = 335/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVANL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTIESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLPLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+A+L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQAVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 +V Sbjct: 682 DVS 684 >gi|114771721|ref|ZP_01449125.1| glycyl-tRNA synthetase beta subunit [alpha proteobacterium HTCC2255] gi|114547793|gb|EAU50683.1| glycyl-tRNA synthetase beta subunit [alpha proteobacterium HTCC2255] Length = 732 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 282/750 (37%), Positives = 415/750 (55%), Gaps = 76/750 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPA MQ+KA EDL+ ++ L E G+ Y + + TP RL L ++GL Sbjct: 8 MADLLLELFSEEIPAIMQNKACEDLNNVVTNALVEAGLTYNSSKSLSTPRRLCLMIEGLI 67 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GPRV A ++A++GFLR GL TI +++ D KKG Y A++ K R Sbjct: 68 NKSPDTREERKGPRVDAPEQALNGFLRGVGL-TIDQLEVR-DDKKGKTYFAIIEKEGRFA 125 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ A+ PWPKSMRW + + W+RPL SILCIL AED + + +++ Sbjct: 126 SEIVSEVINDAVNNFPWPKSMRWGSK-----SLKWVRPLHSILCILSAED-GVETVKVEI 179 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N+T GHRF +P V S++ Y +DL+++ V+LD R + IL DA LA A G Sbjct: 180 DGIKSSNLTAGHRFMSPDHFTVSSIEQYQKDLKKSYVILDAHERADHILEDAKNLAFAQG 239 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED +LL E+ GLVE+ V MG K++ LP E++ ++K +QK F R + Sbjct: 240 LELVEDINLLNEVAGLVEYPVVLMGEISKEFFELPAEVLMTSMKEHQKFFSVRNPKSNRI 299 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N SD G I+ GN +V+ ARL DA FW+ D L K +++ Sbjct: 300 EKFITVANRATSDNGETIIAGNQKVLFARLSDAKFFWEND------LRIAKAGMNEWSEK 353 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+K V FH K+G+Q ER+ RI + ++L +AD+ L ++A +L K Sbjct: 354 LNK-------------VTFHNKLGSQSERIKRISFIASATSRLTNADMELTNKAAMLCKV 400 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EF +LQG +G YA I +A +EH P+GP + VP+ +SI+V+LA Sbjct: 401 DLSSEMVGEFAKLQGLMGSYYAAEAGLPIEIGNASKEHYSPQGPTDAVPSAPVSISVALA 460 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--------- 531 DK+DTL FW I+EKP+GSKDP+ALRRA LGIIR++++N+I+ PL + Sbjct: 461 DKIDTLTGFWLIDEKPTGSKDPFALRRAALGIIRLVIDNEINEPLECILAYGFYLNSIAV 520 Query: 532 --------------------------------------QNLILFFHDRLKLYLHDRDIRH 553 ++LI FFHDRLK+YL D++I H Sbjct: 521 QSLEDKSQTKYIDLSNNSLEQIFELIGEGHSKKTKGILRDLISFFHDRLKVYLRDQNINH 580 Query: 554 DLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EIS 611 D+I+A L P N N + K L EF S G+ L KR IL+ EEKK+ Sbjct: 581 DVIDACLAMPNNTNFSLLAKRAKVLQEFCDSDDGKNLLQGFKRANNILSAEEKKDGVSYE 640 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVN 671 Y ++ E+ L+ ++ + + I + ++ + + L ++ PI++FF+ V +N Sbjct: 641 GTPEINYAQIDEERSLFKILDENESDIIDYINKQDFKSAMGALANLRLPIDLFFENVQIN 700 Query: 672 VDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D + VR NRL LL I+ I+ + I Sbjct: 701 SDSKIVRRNRLCLLNRIRLIMKSAADFTLI 730 >gi|120552981|ref|YP_957332.1| glycyl-tRNA synthetase subunit beta [Marinobacter aquaeolei VT8] gi|166227917|sp|A1TWM6|SYGB_MARAV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120322830|gb|ABM17145.1| glycyl-tRNA synthetase beta chain [Marinobacter aquaeolei VT8] Length = 693 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 193/698 (27%), Positives = 335/698 (47%), Gaps = 60/698 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + ++ + ++ L+E GV + + + P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALKPLSDAFTQGIVKGLEEAGVAFGAVESFAAPRRLAVRIRDLADA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K E+ GP V G +A+ GF S G+ ++ D KG + + Sbjct: 65 QPDKSVEKRGPAVKAAFDDSGNPTRALTGFATSLGITPDQLDTMETD--KGAWLVYRTVE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ +V ++ +P PK MRW + ++RP+ ++ + K+ Sbjct: 123 KGKPTVELMPDLVEKSLAALPIPKRMRWGAWKT-----EFVRPVHWLILLY-----GNKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ + + GN T GHRFH P + V + Y L+ E VL D RR I Sbjct: 173 IEAPVMNLKPGNKTRGHRFHCPKELIVPTPADYEVVLKQEGYVLADFAERREQIRAGVAA 232 Query: 235 LA-SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G + V D+DLL+E+ L EW MG F+ ++L +P E + ++K +QK F Sbjct: 233 LAEKEAGGKAVIDEDLLDEVTALNEWPVPLMGRFEDRFLEVPAEALISSMKEHQKYFHVV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + FI V+N+++ D + ++ GN +V+ RL DA F++ D+ Sbjct: 293 DASDNMLPLFITVANLESKDP-SQVISGNEKVIRPRLSDAAFFYETDRK----------- 340 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L+ R+ L +VF K+G+ ++ R+ L KKIA+ I++D AL +R Sbjct: 341 ---------TRLEDRIESLKP--IVFQDKLGSIYDKSVRVAALAKKIAEAINSDPALAER 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL TE+V EF +LQG +G+ YA E+ A+ E PR +++PT Sbjct: 390 AAMLAKTDLVTEMVLEFTDLQGIMGQYYAANDGEHEDVAKALNEQYMPRFAGDDLPTTLT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 V++AD++D+L+ + IN+ PSG++DP+ALRRA+LG++RII+E ++ + L E Sbjct: 450 GCAVAIADRIDSLVGLFGINQPPSGTRDPFALRRASLGVLRIIIERQLPLDLQTVCEWAE 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ + DR + + ++ I ++ A+ L +K + Sbjct: 510 QNFTVLTENNTASTVVDYMLDRFRAHYDEQGICAEVYLAVHARRPTRPLDFDRRVKAVEA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ IL + I + L AEK L A + + + Sbjct: 570 FRQLPEAQALAGANKRVSNILTKQ--GGDSIGETVDTALLQDAAEKTLAAKVEEQAQQVL 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + Y L S+ EP++ FFD+V+V DD V Sbjct: 628 PMFEQGDYASALTSLASLREPVDTFFDEVMVMADDDAV 665 >gi|311696630|gb|ADP99503.1| glycyl-tRNA synthetase beta subunit [marine bacterium HP15] Length = 693 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 191/698 (27%), Positives = 332/698 (47%), Gaps = 60/698 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL+E+ +EE+P + ++ + + L+E G+ + + + P RL + ++ L+ Sbjct: 5 DFLVELGTEELPPKALKPLSDAFTQGIARGLEEAGIEFGKVEAFAAPRRLAVRIRDLADS 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+K E+ GP V G +A+ GF S G+ ++ D KG + + Sbjct: 65 QPDKSVEKRGPAVKAAFDDAGNPTRALTGFATSLGVTPDQLDTLETD--KGAWVVYRTVE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++ +V ++ +P PK MRW + ++RP+ ++ + K+ Sbjct: 123 QGKPTVELMPELVEQSLAGLPIPKRMRWGAHRT-----EFVRPVHWVVMLF-----GNKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 I+ + + GN T GHRFH P + V + Y L+ E V+ D RR I Sbjct: 173 IEAPIMGLTPGNKTRGHRFHCPKSLIVPTPSDYEVVLKQEGYVIADFAERREQIRAGVTE 232 Query: 235 LA-SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G + V D+DLL+E+ L EW MG F++++L +P E + ++K +QK F Sbjct: 233 LAEKEAGGKAVIDEDLLDEVTALNEWPVPLMGRFEERFLEVPAEALISSMKEHQKYFHVV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G + FI V+NI++ D + +V GN +V+ RL DA F++ D+ Sbjct: 293 AADGEMLPLFITVANIESKDP-SQVVSGNEKVIRPRLSDAAFFYETDRK----------- 340 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L+ R+ L +VF K+G+ ++ R+ L KKIA I +D AL +R Sbjct: 341 ---------TKLEDRIDALKP--IVFQEKLGSIYDKSVRVAALAKKIADAIGSDPALAER 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L+K DL TE+V EF +LQG +G+ YA E A+ E PR +++PT Sbjct: 390 AAMLAKTDLVTEMVLEFTDLQGIMGQYYAANDGEPEDVAKALNEQYMPRFAGDDLPTTLT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 +++AD+LD+L+ + IN+ PSG++DP+ALRRA+LG++RII+E ++ + L E Sbjct: 450 GCAIAIADRLDSLVGLFGINQPPSGTRDPFALRRASLGVLRIIIERELPLDLQTCCEWAE 509 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ + +R + + ++ I ++ A+ L +K + Sbjct: 510 ENFSVLTEQNTASTVVDYMLERFRAHYDEQGIGAEVYLAVHARRPTRPLDFDRRVKAVEA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ IL + I + L AEK L + + Sbjct: 570 FRQLPEAQALAGANKRVSNILTKQ--GGDSIGETVDASLLQDSAEKALAEQVDQQAAKVL 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 ++ Y L S+ P++ FFD+V+V DD V Sbjct: 628 PLFENGDYASALSSLASLRAPVDNFFDEVMVMADDEAV 665 >gi|226942180|ref|YP_002797253.1| glycyl-tRNA synthetase subunit beta [Azotobacter vinelandii DJ] gi|259511919|sp|C1DFV1|SYGB_AZOVD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226717107|gb|ACO76278.1| Glycyl-tRNA synthetase protein, beta subunit [Azotobacter vinelandii DJ] Length = 685 Score = 743 bits (1920), Expect = 0.0, Method: Composition-based stats. Identities = 212/723 (29%), Positives = 338/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ SEE+P + A + L G+ Y+ R Y P RL + ++ Sbjct: 1 MSAQDFLVELGSEELPPKALKSLATAFLAGIEKGLAAAGLEYRVARFYAAPRRLAVLVEH 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P++ GP V G +A GF R G+ ++ + G Sbjct: 61 LVAQQPDRTLNLDGPPVAAAFDAEGNPTQAALGFARKCGV------ELHEIDSSGAKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P + +L IV ++ ++P PK MRW T ++RP + ++ + Sbjct: 115 SRHIPGQPASALLPAIVQASLDELPIPKRMRWGTRKE-----EFVRPSQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++D ++ G + GHRFH P +++ Y+ DL A VL D RR I Sbjct: 165 GNQVVDCEILAQKAGRESMGHRFHHPDAVRISQPSSYLEDLRSAYVLADFAERRELIAGR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ V +DLL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VADLAAQQQGSAVVPEDLLDEVTALVEWPVPLVCSFEERFLTVPQEALISTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L CFI V+NI++ D A IV GN +VV RL DA F+ +D+ Sbjct: 285 LLDANGKLLPCFITVANIESRDP-AQIVAGNEKVVRPRLTDAEFFFNQDKR--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL VVF A++G+ E+ R+ L IA+ I D Sbjct: 335 -----------QPLESFNQRL--ASVVFQAQLGSVLEKAERVSRLAGFIAERIGGDPQHA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSKADL +E+V EFPELQG G YA+ E A++E PRG +P+ Sbjct: 382 IRAGLLSKADLASEMVGEFPELQGIAGYHYALNAGEPEDIARALDEQYMPRGAGAQLPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E ++D+ L + Sbjct: 442 LTGAAVAMADKLDTLVGIFGIGMPPTGSKDPYALRRAALGILRILIEKQLDLNLEEASHF 501 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + + F DRL+ D I A+ + + + ++ Sbjct: 502 AVAQYGTKVKASGLAEQVSEFVFDRLRARYEDEGIDVSSYLAVRALQPASAYDLDLRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E KR+ +L E K + I +Y +E LY+ + Sbjct: 562 VQAFRRLPEAEALAAVNKRVSNLLGKYEGK---LPAAIEARYFDNASEFSLYSALQQAQH 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ +RY + + L S+ +P++ +F+ VLVN +D +R NR ++L ++ + L V Sbjct: 619 AVRPLAAERRYREALERLASLRDPVDAYFEAVLVNAEDPAIRANRHAMLAQLRGLFLCVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|304393464|ref|ZP_07375392.1| glycyl-tRNA synthetase, beta subunit [Ahrensia sp. R2A130] gi|303294471|gb|EFL88843.1| glycyl-tRNA synthetase, beta subunit [Ahrensia sp. R2A130] Length = 778 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 293/795 (36%), Positives = 428/795 (53%), Gaps = 111/795 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLE+ SEEIPARMQ KAA DL ++ L + G+ Y+ R+YWTP RL L L+GL+ Sbjct: 1 MPDFLLELRSEEIPARMQRKAAGDLKKLVTDALVDAGLTYEGAREYWTPRRLTLDLRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EER GPR A +KAI GFLR GL+++ + + DPKKG+ +AV+ KP R Sbjct: 61 ARSADIKEERKGPRTDAPEKAIAGFLRGAGLESVDQAETRTDPKKGEFLVAVIEKPGRDA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ +++P I+ PWPKSMRW + + W+RPL+SI+ +L E+ + +++ ++ Sbjct: 121 ADIIASVMPGIIENFPWPKSMRWGAKSAQAGSLRWVRPLQSIIALLGVENDETEVVPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +TYGHRFHAP I V+ D Y+ LE A V+LD E R++ I DA LA A G Sbjct: 181 SGIATGKVTYGHRFHAPEEITVRRFDDYVAKLEAANVVLDAERRKDIIRADAANLAFAKG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 LELVED+ LLEE+ LVEW +G F YL +P E+IRLTIK NQKCFV R + E L Sbjct: 241 LELVEDEALLEEVANLVEWPVALLGEFGADYLDIPPEVIRLTIKENQKCFVLRKQGETAL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N F+LVSNI A DGG I GN++VV ARL DA FW+ D L +++ + + Sbjct: 301 SNTFLLVSNIDAHDGGTEIASGNAKVVNARLSDAKFFWETD------LHTIETEGFQPWI 354 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 D + +V FHAK+G+QG+RV RI L +++A L+ AD + A ++K Sbjct: 355 D------------KLDNVTFHAKLGSQGDRVRRIAALARELAPLVGADPDDAEHAAKIAK 402 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL ++++ EFPELQG +G++YA ++ E A E H P GP ++VPT +S+ V+L Sbjct: 403 ADLNSQMIYEFPELQGAMGRKYAEIKGEKPEVAAAAELHYSPLGPTDDVPTEPVSVAVAL 462 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------- 530 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+ R++LENK+ + + I Sbjct: 463 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVTRLLLENKLSVSVFSLIRESYIQHLFR 522 Query: 531 ----------------DQNLILFFHDR---LKLYLHDRDIRHDLIEAILRPE-------- 563 ++ FF R + + +I +D A+++ + Sbjct: 523 RQAWNEIVLIPLCDHGYASITAFFFYRGDEVAPWAKFSEIDYDRRVAVVKAKEEEADTRD 582 Query: 564 ------------------------NDNLLTIVDLIKH----------LNEFFSSAKGEKF 589 D L D +K L + + + Sbjct: 583 SATLTSGLQDYELSYELPSFGSVIPDLLAFFHDRLKVYLRDSGARHDLIDAVITPASDDL 642 Query: 590 LLSAKRI------------FQILA----------IEEKKNREISLEISPQYLLLEAEKRL 627 L +R+ +LA EEKK ++ + P + E+ L Sbjct: 643 LAITRRVEALGSFLDTDDGANLLAGTKRAVNILAAEEKKGTGVAESVDPAMFDTDQERAL 702 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + E+++ + Y L ++ P++ F D V+VNV+D VR NRL+L++ Sbjct: 703 FTTLESAEHCAAEAVEKQNYEGAMKALAALRAPVDAFLDDVMVNVEDDAVRANRLALMRR 762 Query: 688 IKNIILIVINVQKIV 702 I++ V + KI Sbjct: 763 IRDATGTVADFSKIA 777 >gi|240139847|ref|YP_002964324.1| glycine tRNA synthetase, beta subunit [Methylobacterium extorquens AM1] gi|240009821|gb|ACS41047.1| glycine tRNA synthetase, beta subunit [Methylobacterium extorquens AM1] Length = 696 Score = 742 bits (1915), Expect = 0.0, Method: Composition-based stats. Identities = 311/691 (45%), Positives = 415/691 (60%), Gaps = 37/691 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 +I G +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DDITAGTVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+LVED LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDDGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGGAAI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGAAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L K+IA L+ AD AL +RA L+K Sbjct: 343 --ATKLEDRLPKLD--SIVFHEKLGTQGERVARIAALAKEIAPLVGADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE----------NKIDIPLSQFI 529 ADKLDTL FW+I+EKP+GSKDP+ALRRA LG+IR ++E K Sbjct: 459 ADKLDTLAGFWSIDEKPTGSKDPFALRRAALGVIRAVIERSLRLSLASLLKGRFASGSDE 518 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEK 588 +L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L EF S+ G+ Sbjct: 519 RTADLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLLVVRRVEALGEFLSTDDGKN 578 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDFGTHIQESMDHK 645 L KR IL IEEKK+ E L E+ L ++ ++ + Sbjct: 579 LLAGYKRAANILRIEEKKDGRAYDEAPDAALAASGQPEERALAEALAAARQEASAAVAAE 638 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + L + P++ FF++V VN DD Sbjct: 639 DFAGAMRALSRLRAPVDAFFEKVTVNADDPA 669 >gi|218531348|ref|YP_002422164.1| glycyl-tRNA synthetase subunit beta [Methylobacterium chloromethanicum CM4] gi|254781856|sp|B7KUK7|SYGB_METC4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218523651|gb|ACK84236.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium chloromethanicum CM4] Length = 696 Score = 742 bits (1915), Expect = 0.0, Method: Composition-based stats. Identities = 310/691 (44%), Positives = 414/691 (59%), Gaps = 37/691 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGITAGMVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGGAAI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGAAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L +IA L+ AD AL +RA L+K Sbjct: 343 --ATKLEDRLPKLD--SIVFHEKLGTQGERVARIAALAAEIAPLVAADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE----------NKIDIPLSQFI 529 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR ++E K Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRAVIERSLRLSLASLLKGRFVSGSDE 518 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEK 588 +L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L F ++ G+ Sbjct: 519 RTADLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLMVVRRVEALGAFLATDDGKN 578 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDFGTHIQESMDHK 645 L KR IL IEEKK+ E L E+ L ++ ++ + Sbjct: 579 LLAGYKRAANILRIEEKKDGRAYDEAPDAALAASGQPEERALAEALAAARQEASAAVAAE 638 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + L + P++ FF++V VN DD Sbjct: 639 DFAGAMRALSRLRAPVDAFFEKVTVNADDPA 669 >gi|257453498|ref|ZP_05618788.1| glycyl-tRNA synthetase, beta subunit [Enhydrobacter aerosaccus SK60] gi|257448956|gb|EEV23909.1| glycyl-tRNA synthetase, beta subunit [Enhydrobacter aerosaccus SK60] Length = 725 Score = 741 bits (1914), Expect = 0.0, Method: Composition-based stats. Identities = 215/736 (29%), Positives = 359/736 (48%), Gaps = 73/736 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L+ + LK+ + + ++ + P RL L ++G+S Sbjct: 26 MSTILFELGTEELPPKNLKTLRDALNNHVTQSLKDANIRFDTIKSFAAPRRLALQIQGIS 85 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+KIE++ GP V G KA GF + G+ IK D KGD + Sbjct: 86 EKQPDKIEQKRGPAVKAAYDKDGNPTKAAQGFAQGLGIDVKDLITIKGD--KGDYIGYEM 143 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + ++L +I A+ ++P K MR S ++RP+K ++ + + Sbjct: 144 NVIGQPVAELLPSIFQKALDELPIAKRMRSGAERS-----EFVRPVKWLVLLK-----DD 193 Query: 174 KIIDLDLKEIPCG----------NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPEC 223 +++ ++ + G + GHRFH P +K+ + D Y ++L EA V+ D + Sbjct: 194 QVLPATIQGLTSGEAGLQGFEKGRFSLGHRFHHPDMVKIDTADSYEQNLAEAHVIADFDK 253 Query: 224 RRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 R+ I +LA VG + +DLL+E+ LV++ SF+ ++L +P+E + T+ Sbjct: 254 RQQQIKAQVQQLADEVGATAIVPQDLLDEVTALVDYPVALRASFEPRFLQVPQEALISTM 313 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + +QK F +G L FI +SNI + D A ++ GN +VV RL DA F+ +DQ Sbjct: 314 QADQKYFCLTDSQGKLQPYFIFISNIDSKD-KAQVIAGNEKVVRPRLADAEFFFLQDQK- 371 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 +PL L VF K+GT E+ RI L IA Sbjct: 372 -------------------QPLFALTENLKTR--VFQDKLGTIWEKSERIAKLAAFIATQ 410 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 I DV RA +LSKADL + +V EFPELQG G YA L E + AIEE P+ Sbjct: 411 IGEDVEQTARAGLLSKADLASTLVGEFPELQGVAGTYYARLNQEPEAVAAAIEEQYLPKF 470 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P I ++LAD+LDTL+ + I++ P+GSKDP++LRRA +G++RI++E K+ + Sbjct: 471 SGDKLPATNIGTALALADRLDTLVGIFGIDQAPTGSKDPFSLRRAAIGVLRILIEKKLPL 530 Query: 524 PLSQFIEDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 L +E ++ F + R + ++ + D I A+ + Sbjct: 531 NLVVLLEQALLGYVGKIDDLPKTFKQVMAFINSRYRAMYEEQGVSVDTIMAVQALQPQVP 590 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + IK + F ++ + KR+ ILA E EI+ ++ YL AEK L Sbjct: 591 MDFDHRIKAVQAFRDLPPAKQLAEANKRVANILAKAE---GEIATQVQTAYLQEPAEKAL 647 Query: 628 YAVISDFGTHIQESM--DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 Y + I+ D+ Y QI L ++ +P++ FF+QV+VN +D ++ NRL+LL Sbjct: 648 YQAVQTAAQSIEPHQHTDNANYTQILQSLATLQQPLDDFFEQVMVNSEDANLKANRLALL 707 Query: 686 QYIKNIILIVINVQKI 701 + ++ + L V ++ ++ Sbjct: 708 KKVRGLFLTVADISEL 723 >gi|270157200|ref|ZP_06185857.1| glycyl-tRNA synthetase beta subunit [Legionella longbeachae D-4968] gi|269989225|gb|EEZ95479.1| glycyl-tRNA synthetase beta subunit [Legionella longbeachae D-4968] Length = 689 Score = 741 bits (1914), Expect = 0.0, Method: Composition-based stats. Identities = 203/720 (28%), Positives = 357/720 (49%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A++ + +L+ L + ++Y +++Y TP R+ + + GL Sbjct: 4 DFIFELGCEELPSGSVWPLADEFANLLLTALDKAQLVYGQVKRYATPRRIAVAILGLQAQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP + G A+ GF++S G + +++ + KG + + Sbjct: 64 QQSQRITRRGPALAAAYDKEGNPSPALLGFVKSCGAELEQLSRLETE--KGAWIVYETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L T++ A+ + K MRW + + RP+ I+ + + + Sbjct: 122 QGNKTKDLLPTLISQALATLSISKPMRWGSGDD-----EFARPVHWIVTLY-----GDDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ L I G I+ GHRFH P I + S Y ++EA V+ D RR I +L Sbjct: 172 IEYTLLGIQSGRISRGHRFHHPQQISIHSAQSYEAQMKEAFVMADFAHRRQIIQEQVKQL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ ++ + LL+E+ +VEW Q M F+K++L +P E + +++++QKCF + + Sbjct: 232 AASYQATVIMPESLLDEVTSIVEWPQALMADFEKEFLEVPAESLIASMQSHQKCFALKDK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI VSNI +S+ ++ GN +V+ ARL DA F+++D+ Sbjct: 292 QGNLLPHFITVSNIVSSNP-KQVIMGNEKVMRARLSDAAFFFRQDKKQA----------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L QR+ VVF AK+GT ++ R+ + ++ ++ +V RA Sbjct: 340 ---------LSQRIP--GTEHVVFQAKLGTLLDKALRVEAMMTYLSAALNLEVHQAQRAA 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK DL T +V EFPELQG +G YA+ E+ + A+ E PR +++P + + + Sbjct: 389 QLSKCDLLTGMVGEFPELQGLMGYYYALNDGEDQAVAHALNEQYMPRFSADSLPKSDLGL 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +SLA+++DTL+ +AI +KPSG KDP+ LRR L ++R+++ + + LS IE Sbjct: 449 ALSLAERVDTLVGIFAIGQKPSGVKDPFKLRRHALAVVRLLISTRAPLNLSTLIEQAITH 508 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L LF DRL+ Y + + DLI A +++ L + + L Sbjct: 509 YGVTVSIEPNLRHELKLFILDRLQSYYQGQGLSIDLIHAGRARQDEWLYDLDKRLSALQA 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ +LA EK + I + E EK LY + ++ Sbjct: 569 FVTLPEAASLSAACKRVNNLLAQIEK---HVLPPIKEELFEDEVEKSLYTQVKHISQAVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL ++ EP++ FFD+V+V VDD ++ NRL+LL +++++ V ++ Sbjct: 626 PLYRTGEYSSLLKLLATLKEPVDAFFDKVMVMVDDASIKSNRLALLVCLQDLLQGVADIS 685 >gi|229524922|ref|ZP_04414327.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae bv. albensis VL426] gi|229338503|gb|EEO03520.1| glycyl-tRNA synthetase beta chain [Vibrio cholerae bv. albensis VL426] Length = 688 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 200/723 (27%), Positives = 336/723 (46%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P + AE + L + ++ + + TP RL L + L Sbjct: 1 MAKEFLIELGTEELPPKQLRTLAEAFAANFAAELAAADIAHEGVTWFATPRRLALKVASL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+++ E+ GP V G KA +G+ R G+ ++ D KG+ L Sbjct: 61 AESQPDRVVEKRGPAVNVAFDADGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + V+ + A+ +P K MRW + +IRP+K++ + +E Sbjct: 119 EQVQGQQTASVVVEMAAKALANLPIAKPMRWGDKET-----QFIRPVKTLTILFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + GHRF ++S + Y LEE V+ D R+ I+ Sbjct: 171 --LIQGEILGVASARTLRGHRFMGEAEFTLESAEQYPAILEERGKVIADYATRKAMIIEG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A +G + L+EE+ LVEW V F++K+L +P E + T+K +QK F Sbjct: 229 SQQAAQQLGGIADLEDALVEEVTSLVEWPVVMTAKFEEKFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + IV+GN +VV RL DA F+ D+ Sbjct: 289 VYDASKKLLPNFIFVSNIESKEPR-HIVEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R++ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLVDRLSLLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSR 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RI++E + L I Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRILVEYGYQLDLVDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q +I F R + D D+I+++L +K Sbjct: 505 AKSLFGNRLTNANVEQEVIEFMLGRFPTWYQDAGFSIDIIQSVLARNPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F + + E + KR+ ILA + E+ EI L +AEK L + Sbjct: 565 VSHFRALEEAEALAAANKRVGNILAKY---DGELGEEIDLALLQEDAEKALAEAVEIMAE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + P++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLTLLNKLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|154686786|ref|YP_001421947.1| glycyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens FZB42] gi|154352637|gb|ABS74716.1| GlyS [Bacillus amyloliquefaciens FZB42] Length = 679 Score = 740 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 217/720 (30%), Positives = 352/720 (48%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H + L L G L E+ + + ++ + TP RL +Y+K Sbjct: 1 MSKQDLLLEIGLEEMPARFLHDSMVQLGEKLTGWLAEKNIAHGEVKLFNTPRRLAVYIKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G + D IK D + Sbjct: 61 VAEKQADIQEEAKGPAKKIALDADGNWTKAAIGFSKGQGAG-VDDLYIK-DVNGTEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW T +IRP+K I+ + + Sbjct: 119 QKFQAGQETKTLLPQ-LENLIAGMHFPKNMRWGTQD-----LRYIRPIKWIIALFGKD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + + G T GHRF + V + Y + L+E V+ DP+ R+ I + Sbjct: 171 ---VIPFKITNVETGRNTQGHRFLG-QEVSVDAPSSYEKLLKEQSVIADPKERKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + D+DLL E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 227 LDALAAEKKWNIPIDEDLLNEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L FI V N + + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDENGNLLPHFITVRNGNS-HAIENVARGNEKVLRARLSDAAFFYKEDQKLN------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D+ + +L+ ++VFH ++G+ G++V R+ + K+A + AD Sbjct: 339 -------------IDENVKKLE--NIVFHEELGSLGDKVRRVTAIAGKLAVRLKADEQTQ 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR V Sbjct: 384 KLVKRAAEISKFDLVTHMIYEFPELQGVMGEKYARMLGEDDAVAAAVNEHYMPRAAGGEV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI----- 523 P+ V+LADKLDT+ +F++I+ P+GS+DPY LRR GI+ I+++ I Sbjct: 444 PSTFTGAVVALADKLDTIASFFSIDVIPTGSQDPYGLRRQASGIVSILIDRNWGISFKEL 503 Query: 524 -PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 L++ ++ L+ FF RLK L+ DIRHD+IEA+L V + L + Sbjct: 504 LSLTETEKENELLDFFTQRLKYVLNAEDIRHDVIEAVLDSTELEPYAAVHKARVLEKHLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ S R+ I E ++ I+P E EK+L+ + ES Sbjct: 564 TPGFKETAESLGRVISISKKGESRD------INPDLFENEQEKKLFDAYQKTKDSVAESF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y Q +L + EPIE +F+ +VN DD ++ NRL+ + + ++I N+ ++ Sbjct: 618 ASKNYEQALAVLSGLKEPIEDYFNHTMVNADDEALKTNRLAQMTALADVIKSFANMNHLI 677 >gi|289164399|ref|YP_003454537.1| glycyl-tRNA synthetase beta chain [Legionella longbeachae NSW150] gi|288857572|emb|CBJ11410.1| glycyl-tRNA synthetase beta chain [Legionella longbeachae NSW150] Length = 689 Score = 740 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 356/720 (49%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A++ + +L+ L + ++Y +++Y TP R+ + + GL Sbjct: 4 DFIFELGCEELPSGSVWPLADEFANLLLTALDKAQLVYGQVKRYATPRRIAVAILGLQAQ 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP + G A+ GF++S G + +++ + KG + + Sbjct: 64 QQSQRITRRGPALAAAYDKEGNPSPALLGFVKSCGAELEQLSRLETE--KGAWIVYETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L T++ A+ + K MRW + + RP+ I+ + + + Sbjct: 122 QGNKTKDLLPTLISQALATLSISKPMRWGSGDD-----EFARPVHWIVTLY-----GDDV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I+ L I G I+ GHRFH P I + S Y ++EA V+ D RR I +L Sbjct: 172 IEYTLLGIQSGRISRGHRFHHPQQISIHSAQSYEAQMKEAFVMADFAHRRQIIQEQVKQL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ + + LL+E+ +VEW Q M F+K++L +P E + +++++QKCF + + Sbjct: 232 AASYQATAIMPESLLDEVTSIVEWPQALMADFEKEFLEVPAESLIASMQSHQKCFALKDK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI VSNI +S+ ++ GN +V+ ARL DA F+++D+ Sbjct: 292 QGNLLPHFITVSNIVSSNP-KQVIMGNEKVMRARLSDAAFFFRQDKKQA----------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L QR+ VVF AK+GT ++ R+ + ++ ++ +V RA Sbjct: 340 ---------LSQRIP--GTEHVVFQAKLGTLLDKALRVEAMMTYLSAALNLEVHQAQRAA 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK DL T +V EFPELQG +G YA+ E+ + A+ E PR +++P + + + Sbjct: 389 QLSKCDLLTGMVGEFPELQGLMGYYYALNDGEDQAVAHALNEQYMPRFSADSLPKSDLGL 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +SLA+++DTL+ +AI +KPSG KDP+ LRR L ++R+++ + + LS IE Sbjct: 449 ALSLAERVDTLVGIFAIGQKPSGVKDPFKLRRHALAVVRLLISTRAPLNLSTLIEQAITH 508 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L LF DRL+ Y + + DLI A +++ L + + L Sbjct: 509 YGVTVSIEPNLRHELKLFILDRLQSYYQGQGLSIDLIHAGRARQDEWLYDLDKRLSALQA 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ +LA EK + I + E EK LY I ++ Sbjct: 569 FVTLPEAASLSAACKRVNNLLAQIEK---HVLPPIKEELFEDEVEKSLYTQIKHISQAVE 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL ++ EP++ FFD+V+V VDD ++ NRL+LL +++++ V ++ Sbjct: 626 PLYRTGEYSSLLKLLATLKEPVDAFFDKVMVMVDDASIKSNRLALLVCLQDLLQGVADIS 685 >gi|117618734|ref|YP_854662.1| glycyl-tRNA synthetase subunit beta [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166227909|sp|A0KEJ9|SYGB_AERHH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|117560141|gb|ABK37089.1| glycyl-tRNA synthetase, beta subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 689 Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats. Identities = 213/721 (29%), Positives = 341/721 (47%), Gaps = 61/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI + E+P + AE + L L + + + ++ + +P RL L + L+ Sbjct: 4 HTFLVEIGTAELPPKALRSLAEAFADNLKSELTKADLAFGDVEWFASPRRLALKVSELAG 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 64 EQPSKSVEKRGPAVAQAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHTAK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +D+L +V A+ K+P PK MRW ++RP+ ++ +L E Sbjct: 122 VEGRPAKDLLGELVSQALAKLPIPKMMRWGDK-----TIQFVRPVFTVTLLLDGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 ++ + I GHRF + + Y + L E MV+ D R+ I DA Sbjct: 172 LVPAHILGIDSARTLRGHRFMGESEFTIDNASQYPQILQERGMVIADFMARKVKIKADAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A G D LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 232 AAAAAFGGVADLDDALLEEVTALVEWPVVLTANFEEKFLAVPAEALVHTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V+NI++ D + I+ GN +VV RL DA F+K D Sbjct: 292 DKNGKLLPKFIFVTNIESKDP-SQIISGNEKVVRPRLSDAEFFFKTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L + L R+ RL+ V+F ++GT +V RI + IA+ I ADVA R Sbjct: 338 -------LKQTLASRLPRLET--VLFQQQLGTVKAKVERIETVAGFIAERIGADVAQAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF + QG +G YA E+ + A+ E PR + +P+ + Sbjct: 389 AGLLSKCDLMTNMVGEFTDTQGVMGMHYARHDGEDEAVAVALNEQYMPRFAGDALPSGLV 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + V+LADK DTL + I P G KDP+ALRRA +G +RI+ E ++D+ L + +E+ Sbjct: 449 ACAVALADKFDTLAGIFGIGMLPKGDKDPFALRRAAIGALRIMTEKQLDLDLVELVEEAV 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + D I D++ A+L L +K ++ Sbjct: 509 RVYGDKLTNKTVVTDVVDFMLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F S + KR+ ILA K E+ + P+ L+ AEK L +++ + Sbjct: 569 HFRSLDAALALAAANKRVSNILA---KVEGELPTAVKPELLVDAAEKALATQVAELQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y L ++ EP++ FF++V+V DD ++ NRL+LL ++N+ L V ++ Sbjct: 626 APLFAAGDYQAALTRLAALREPVDTFFNEVMVMADDEALKANRLALLNNLRNLFLQVADI 685 Query: 699 Q 699 Sbjct: 686 S 686 >gi|152989471|ref|YP_001345404.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PA7] gi|150964629|gb|ABR86654.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa PA7] Length = 685 Score = 739 bits (1909), Expect = 0.0, Method: Composition-based stats. Identities = 207/723 (28%), Positives = 340/723 (47%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 2 MSAKDFLVELGTEELPPKALNSLGEAFLNGIEKGLKAAGLSYSAARFYAAPRRLAVLIEQ 61 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 62 LAVQQPDRTVNLDGPPLQAAFDASGKPTQAALGFAKKCGVD------LEQIDKSGPKLRF 115 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 116 SQTIAGQPAAGLLPGIVETSLNELPIPKRMRWAARRD-----EFVRPTQWLVMLF----- 165 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 166 GDEVVDCEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 226 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 286 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDKK--------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT ++ R+ L IA+ I D Sbjct: 336 -----------QPLESFNERLQ--NVVFQAQLGTVFDKARRVSGLAAYIAERIGGDAQNA 382 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 383 ARAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEPEDVALALNEQYMPRGAGAELPST 442 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 443 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVHA 502 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 503 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 562 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 563 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPASVDASLLVEAAEKALGSAVANAES 619 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ + L V Sbjct: 620 EVAPLAAARDYRAALARLAALREPVDAFFADVMVNVDDSSVRANRYALLAKLRGLFLGVA 679 Query: 697 NVQ 699 ++ Sbjct: 680 DIS 682 >gi|212632930|ref|YP_002309455.1| glycyl-tRNA synthetase subunit beta [Shewanella piezotolerans WP3] gi|226737059|sp|B8CH76|SYGB_SHEPW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|212554414|gb|ACJ26868.1| Glycyl-tRNA synthetase, beta subunit [Shewanella piezotolerans WP3] Length = 689 Score = 739 bits (1909), Expect = 0.0, Method: Composition-based stats. Identities = 215/720 (29%), Positives = 349/720 (48%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE LK+ + +++ + P RL + + L+ Sbjct: 5 NLLIEVGTEELPPKSLRKLAESFLNNFTDELKKAELTFESAVWHAAPRRLAINVNQLALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++K D KG+ L + Sbjct: 65 QADKVVEKRGPAVAQAFDADGNPTKAAMGWARGNGITVEQADRLKTD--KGEWLLHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ K+P PK MRW + + +IRP+ ++ +L +E + Sbjct: 123 VGVETKSLIAAMAQRSLDKLPIPKPMRWGSNTT-----QFIRPVHTVTMLLGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 ++ +L I I GHRF I++ D+Y+ L E+ V + E R+ I DA Sbjct: 173 VEGELLGIKSDRIIRGHRFMGKPSIELDHADNYLSVLKEQGKVDANYEARKAQIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKLGGVADLEDDLLEEVTSLVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D I+ GN +VV RL DA F++ D+ N Sbjct: 293 DAGQLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFETDKKN----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R++ L+ VVF ++GT +RV RI + IA I A+ RA Sbjct: 341 ---------SLESRLSSLET--VVFQKQLGTIKQRVERISAMAAYIATSIGANSEEAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EF +LQG +G YA L E + A+ E KP+ + VPT +S Sbjct: 390 GLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALSEQYKPKFSGDTVPTAPVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 I V+LA+KLDTL+ + I + P G+ DP+ALRRA +G++RI LEN + + L Sbjct: 450 ICVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQE 509 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R + + D+ I D+I A+L IK + Sbjct: 510 LHGENLTNDKAPEQVLEFFMGRFRAWYQDQGISVDVILAVLARRPTAPADFESRIKAVAH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA K E+ I L+ AEK L A +++ + Sbjct: 570 FRTLEQALALAAANKRVSNILA---KVEGELPATIDEALLVEAAEKALAAKLAELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ E ++ FF+ V+V DD +++NRL+LL +++ L ++ Sbjct: 627 PLFAAANYQEALALLASLRESVDTFFEDVMVMADDEALKNNRLALLSSLRDQFLHAADIS 686 >gi|254562265|ref|YP_003069360.1| glycine tRNA synthetase subunit beta [Methylobacterium extorquens DM4] gi|254269543|emb|CAX25509.1| glycine tRNA synthetase, beta subunit [Methylobacterium extorquens DM4] Length = 696 Score = 739 bits (1909), Expect = 0.0, Method: Composition-based stats. Identities = 306/691 (44%), Positives = 411/691 (59%), Gaps = 37/691 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGITADTVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGG AI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGVAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L K+IA L+ D AL +RA L+K Sbjct: 343 --AVRLEDRLPKLD--SIVFHEKLGTQGERVARIAALAKEIAPLVGTDPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE----------NKIDIPLSQFI 529 ADKLDTL FW+I+EKP+GSKDP+ALRRA LG+IR ++E K Sbjct: 459 ADKLDTLAGFWSIDEKPTGSKDPFALRRAALGVIRAVIERSLRLSLASLLKGRFASGSDE 518 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEK 588 +L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L F ++ G+ Sbjct: 519 RTADLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLMVVRRVEALGAFLATDDGKN 578 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLL---LEAEKRLYAVISDFGTHIQESMDHK 645 L KR IL IEEKK+ E L E+ L ++ ++ + Sbjct: 579 LLAGYKRAANILRIEEKKDGRAYDEAPDAGLAASGQPEERALAEALAAARQEASAAVAAE 638 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + L + P++ FF++V VN DD Sbjct: 639 DFAGAMRALSRLRAPVDAFFEKVTVNADDPA 669 >gi|293610784|ref|ZP_06693084.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827128|gb|EFF85493.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 689 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 206/718 (28%), Positives = 352/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLNFASIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K +L + ++I+D Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVLLLK-----DDQIVD 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLTALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINSEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVTFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEATPEGS----VVEANLVEAAEKALFAELQAVTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADVS 685 >gi|260549881|ref|ZP_05824097.1| glycyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260407131|gb|EEX00608.1| glycyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 689 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 206/718 (28%), Positives = 351/718 (48%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLNFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITADQLSTFH--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K +L + ++I+D Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVLLLK-----DDQIVD 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLEALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 NIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEAAPEGS----VVEANLVEDAEKALFAELQALTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDSVMVMADDADLKANRLRLLAQLRNLFTAVADVS 685 >gi|328554260|gb|AEB24752.1| glycyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens TA208] gi|328912657|gb|AEB64253.1| glycyl-tRNA synthetase (beta subunit) [Bacillus amyloliquefaciens LL3] Length = 679 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 215/720 (29%), Positives = 349/720 (48%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H + L L G L E+ + + ++ + TP RL +Y+K Sbjct: 1 MSKQDLLLEIGLEEMPARFLHDSMVQLGEKLTGWLAEKNIAHGEVKLFNTPRRLAVYIKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G + D IK D + Sbjct: 61 VAEKQADIQEEAKGPAKKIALDADGNWTKAAIGFSKGQGAG-VDDLYIK-DVNGTEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW T +IRP+K I + + Sbjct: 119 QKFQAGQETKTLLPQ-LENLITGMHFPKNMRWGTQD-----LRYIRPIKWIAALFGKD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ + G T GHRF + + + Y L+E V+ DP+ R+ I + Sbjct: 171 ---VIPFEITNVGTGRNTQGHRFLGEE-VSIDAPSSYEELLKEQHVIADPKVRKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + D+DLL E+ LVE+ GSF+ ++L LPEE++ T+K +Q+ F Sbjct: 227 LDALAADKKWNIPIDEDLLNEVNQLVEYPTALYGSFESEFLSLPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L FI V N + + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDENGNLLPHFITVRNGNS-HAIENVARGNEKVLRARLSDAAFFYKEDQKLN------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D + +L+ ++VFH ++G+ G++V R + K+A + AD Sbjct: 339 -------------IDANVKKLE--NIVFHEELGSLGDKVRRAAAIAGKLAVRLKADEQTQ 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR +V Sbjct: 384 KLVKRAAEISKFDLVTHMIYEFPELQGVMGEKYARMLGEDEAVAAAVNEHYMPRAAGGDV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI----- 523 P+ V+LADKLDT+ +F++I+ P+GS+DPY LRR GI+ I+++ I Sbjct: 444 PSTFTGAVVALADKLDTIASFFSIDVIPTGSQDPYGLRRQASGIVSILIDRNWGISFKEL 503 Query: 524 -PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 L++ ++ L+ FF RLK L+ DIRHD+IEA+L + V + L + Sbjct: 504 LSLTETEKENELLDFFTQRLKYVLNAEDIRHDVIEAVLDSTDLEPYAAVHKARVLEKHLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I E ++ I P E EK+L+ + ES Sbjct: 564 TPGFKETAEALGRVISISKKGESRD------IKPDLFENEQEKKLFDAYQKTKDSVAESF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y Q L + EPIE +F+ +VN D+ ++ NRL+ + + ++I N+ ++ Sbjct: 618 ASKNYEQALTALSGLKEPIEDYFNHTMVNADNEALKTNRLAQMTALADVIKSFANMNHLI 677 >gi|163852512|ref|YP_001640555.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] gi|163664117|gb|ABY31484.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] Length = 726 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 311/721 (43%), Positives = 417/721 (57%), Gaps = 67/721 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+S GL ++ DPKKG+ Y AV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKSAGLASLDQATTVTDPKKGEFYHAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + + W+RPL+SI+ E +++ + Sbjct: 121 LDVLAEILPGIIKSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPEVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP P +V+ D Y++ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 DGITAGTVTSGHRFLAPEPFEVRRFDDYVQALERADVILDADRRKDIILHDAKDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+LVED+ LLEE+ GLVE V MGSF++++L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDEGLLEEVAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSDEL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F+LVSN+ ASDGG AI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFVLVSNLIASDGGTAITAGNERVVRARLSDARFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGERV+RI L K+IA L+ AD AL +RA L+K Sbjct: 343 --ATKLEDRLPKLD--SIVFHEKLGTQGERVARIAALAKEIAPLVGADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVAAAIEEHYKPVGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------- 531 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+ R++L + I L + + Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVTRLVLTSNSRIHLIELAKKLVGVFEKS 518 Query: 532 --------------------------------QNLILFFHDRLKLYLHDRDIRHDLIEAI 559 +L+ FF DRLK+YL D+ RHDLI+A+ Sbjct: 519 ISEDSIWRVTAASSEEFATKPFDREEMLAMIASDLLAFFADRLKVYLRDQGARHDLIDAV 578 Query: 560 LR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQY 618 P D+LL +V ++ L EF S+ G+ L KR IL IEEKK+ E Sbjct: 579 FALPGQDDLLLVVRRVEALGEFLSTDDGKNLLAGYKRAANILRIEEKKDGRAYDEAPDAA 638 Query: 619 LL---LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 L E+ L ++ ++ + + L + P++ FF++V VN DD Sbjct: 639 LAASGQPEERALAEALAAARQEASAAVAAEDFAGAMRALSRLRAPVDAFFEKVTVNADDP 698 Query: 676 E 676 Sbjct: 699 A 699 >gi|188582530|ref|YP_001925975.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] gi|179346028|gb|ACB81440.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] Length = 724 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 298/706 (42%), Positives = 404/706 (57%), Gaps = 65/706 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDL ++ L E G +Y+ + + TP RL L++ GL EER G Sbjct: 13 IPARMQRRAAEDLKKLVTDALVERGFLYEGAKAFATPRRLALHVAGLPARGDAVREERRG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PRVGA + A+ GFL+S GL ++ DPKKG+ YLAV+ +P R DVL I+P I Sbjct: 73 PRVGAPEAAVQGFLKSAGLSSLDQATTVTDPKKGEFYLAVIERPGRETLDVLAEILPGII 132 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 + PWPKSMRW + + W+RPL+SI+ E ++ ++ I G T GH Sbjct: 133 KSFPWPKSMRWGAASAQPGSLRWVRPLQSIVATFGPETETPDVVPFAVEGISAGTTTRGH 192 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 RF +P P +V+ D Y+ LE A V+LD + R++ IL+DA LA A GL+LVED+ LLEE Sbjct: 193 RFLSPEPFEVRRFDDYVPALERADVILDADRRKDIILHDAKDLAFARGLDLVEDEGLLEE 252 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVLANCFILVSNIQA 311 + GLVE V MGSF++++L +P E IR TI+ NQKCFV R LA F+LVSN+ A Sbjct: 253 VAGLVERPVVLMGSFEERFLEIPAEAIRATIRANQKCFVLRKSGSEELAPAFLLVSNLVA 312 Query: 312 SDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMAR 371 SDGGAAI GN RVV ARL DA FW+ D+ + L+ R+ + Sbjct: 313 SDGGAAITAGNERVVRARLSDARFFWETDK--------------------ATKLEDRLPK 352 Query: 372 LDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDRAIVLSKADLCTEIVRE 429 LD +VFH K+GTQGERV+RI L ++IA ID D+ LV+RA L+KADL TE+V E Sbjct: 353 LDA--IVFHEKLGTQGERVARIAGLARRIASDIDVQFDLDLVERAARLAKADLVTEMVGE 410 Query: 430 FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINF 489 FPELQG +G++YA LQ E+ AIEEH KP GP + VPT +SI V++ADKLD L F Sbjct: 411 FPELQGLMGRKYATLQGEDPRVAAAIEEHYKPLGPSDRVPTEIVSIAVAMADKLDLLAGF 470 Query: 490 WAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------------- 528 W+I+EKP+GSKDP+ LRRA LG+IR+ILEN + +PL Sbjct: 471 WSIDEKPTGSKDPFGLRRAALGVIRLILENGLRLPLLDGPIWDAFDELPGKSVAILDLSS 530 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVD 572 ++L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V Sbjct: 531 VAALDALDEDTELTDPRAKDLLAFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLLVVR 590 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLL--LEAEKRLYA 629 ++ L F ++ G+ L KR IL IEEKK+ R E E+ L Sbjct: 591 RVEALGAFLATDDGKNLLAGYKRAANILRIEEKKDGRAYDAEPDAALAASGEPEERALAE 650 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 ++ ++ + + L + P++ FF++V VN DD Sbjct: 651 ALTATREEASAAVAAEDFSGAMRALSRLRAPVDAFFEKVTVNADDP 696 >gi|326573918|gb|EGE23868.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis O35E] Length = 692 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 213/726 (29%), Positives = 348/726 (47%), Gaps = 65/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ I+ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWIVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +ID ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIDATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQK------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 342 -------------QPLFELSHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQ 699 V ++ Sbjct: 683 SVADIG 688 >gi|169794555|ref|YP_001712348.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AYE] gi|213158873|ref|YP_002320871.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB0057] gi|215482143|ref|YP_002324325.1| Glycyl-tRNA synthetase beta chain(Glycine--tRNA ligasebeta chain) (GlyRS) [Acinetobacter baumannii AB307-0294] gi|301348164|ref|ZP_07228905.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB056] gi|301511530|ref|ZP_07236767.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB058] gi|301595664|ref|ZP_07240672.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB059] gi|332856634|ref|ZP_08436243.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013150] gi|332868664|ref|ZP_08438311.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013113] gi|226737044|sp|B7GVW2|SYGB_ACIB3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|226737045|sp|B7IA77|SYGB_ACIB5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238688065|sp|B0V7W2|SYGB_ACIBY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169147482|emb|CAM85343.1| glycyl-tRNA synthetase, beta chain [Acinetobacter baumannii AYE] gi|213058033|gb|ACJ42935.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB0057] gi|213988471|gb|ACJ58770.1| Glycyl-tRNA synthetase beta chain(Glycine--tRNA ligasebeta chain) (GlyRS) [Acinetobacter baumannii AB307-0294] gi|332727027|gb|EGJ58517.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013150] gi|332733236|gb|EGJ64431.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013113] Length = 689 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 203/718 (28%), Positives = 351/718 (48%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLNFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVEQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + +++I+ Sbjct: 125 QSLDTLLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQVIE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +L+D+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALSDRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEATPEGS----VVEANLVEDAEKALFAELQAVTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD ++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDAGLKANRLRLLAQLRNLFTAVADVS 685 >gi|308174314|ref|YP_003921019.1| glycyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens DSM 7] gi|307607178|emb|CBI43549.1| glycyl-tRNA synthetase (beta subunit) [Bacillus amyloliquefaciens DSM 7] Length = 679 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 215/720 (29%), Positives = 349/720 (48%), Gaps = 61/720 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H + L L G L E+ + + ++ + TP RL +Y+K Sbjct: 1 MSKQDLLLEIGLEEMPARFLHDSMVQLGEKLTGWLAEKNIAHGEVKLFNTPRRLAVYIKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G + D IK D + Sbjct: 61 VAEKQADIQEEAKGPAKKIALDADGNWTKAAIGFSKGQGAG-VDDLYIK-DVNGTEYVFV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +L + I + +PK+MRW T +IRP+K I + + Sbjct: 119 QKFQAGQETKTLLPQ-LENLITGMHFPKNMRWGTQD-----LRYIRPIKWIAVLFGKD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ + G T GHRF + + + Y L+E V+ DP+ R+ I + Sbjct: 171 ---VIPFEITNVGTGRNTQGHRFLGEE-VSIDAPSSYEELLKEQHVIADPKVRKQMIQSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + D+DLL E+ LVE+ GSF+ ++L LPEE++ T+K +Q+ F Sbjct: 227 LDALAADKKWNIPIDEDLLNEVNQLVEYPTALYGSFESEFLSLPEEVLVTTMKEHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L FI V N + + +GN +V+ ARL DA F+K DQ Sbjct: 287 VKDENGNLLPHFITVRNGNS-HAIENVARGNEKVLRARLSDAAFFYKEDQKLN------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 +D + +L+ ++VFH ++G+ G++V R + K+A + AD Sbjct: 339 -------------IDANVKKLE--NIVFHEELGSLGDKVRRAAAIAGKLAVRLKADEQTQ 383 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR +V Sbjct: 384 KLVKRAAEISKFDLVTHMIYEFPELQGVMGEKYARMLGEDEAVAAAVNEHYMPRAAGGDV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI----- 523 P+ V+LADKLDT+ +F++I+ P+GS+DPY LRR GI+ I+++ I Sbjct: 444 PSTFTGAVVALADKLDTIASFFSIDVIPTGSQDPYGLRRQASGIVSILIDRNWGISFKEL 503 Query: 524 -PLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 L++ ++ L+ FF RLK L+ DIRHD+IEA+L + V + L + Sbjct: 504 LSLTETEKENELLDFFTQRLKYVLNAEDIRHDVIEAVLDSTDLEPYAAVHKARVLEKHLG 563 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + ++ + R+ I E ++ I P E EK+L+ + ES Sbjct: 564 TPGFKETAEALGRVISISKKGESRD------IKPDLFENEQEKKLFDAYQKTKDSVAESF 617 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K Y Q L + EPIE +F+ +VN D+ ++ NRL+ + + ++I N+ ++ Sbjct: 618 ASKNYEQALTALSGLKEPIEDYFNHTMVNADNEALKTNRLAQMTALADVIKSFANMNHLI 677 >gi|260893578|ref|YP_003239675.1| glycyl-tRNA synthetase, beta subunit [Ammonifex degensii KC4] gi|260865719|gb|ACX52825.1| glycyl-tRNA synthetase, beta subunit [Ammonifex degensii KC4] Length = 690 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 225/728 (30%), Positives = 349/728 (47%), Gaps = 68/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLEI +EE+PAR+ EDL LL+E + Y+ ++ + TP RL L +KGL+ Sbjct: 1 MRDFLLEIGTEEMPARLLSSILEDLREKAQELLREARLSYREIKTFGTPRRLVLLVKGLA 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP G KA GF RS G++ + D ++ VY AV Sbjct: 61 EKQERLVREVKGPARRVAFDEEGKPTKAALGFARSQGVK-VEDLVVRLVGDTEYVY-AVK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +VL+ + P I + +P+SMRW S+IRP++ +L + E Sbjct: 119 EEEGRPTPEVLRELCPRLITSLSFPRSMRWGDKK-----ISFIRPIRWLLALY-----GE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I +L + GN+T GHRF + P+ V S + Y + + E V++DPE R+ IL+ Sbjct: 169 EVIPFELDGLKAGNVTRGHRFLSSAPVTVPSPEAYFQLMAENFVVVDPEERKKLILSQLE 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA+ G ++ D +LLEE+ LVE+ F GSF ++L LPE ++ T+K +Q+ F R Sbjct: 229 ELAAREGGKVEADPELLEEVANLVEYATAFCGSFSPEFLRLPEAVLVTTMKEHQRYFPLR 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L F+ V + + I +GN RV+ ARL DA F++ D Sbjct: 289 DKEGKLLPRFLAVHSSSPA-HTEGIRKGNERVLKARLADASFFYRED------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL--- 410 L++PL R+ L VV+ +GT ++ R++ L + + D A Sbjct: 335 -------LARPLADRVEGLKR--VVYLEDLGTLYDKTLRLQELVAYLGNELGVDDATRKI 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L+KADL T +V EFPELQG +G+EYA+ E+ + +A+ E PR + +P Sbjct: 386 LARAAYLAKADLLTHMVYEFPELQGVMGREYALASGEDPAVAEALYEQYLPRFAGDALPQ 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------------LE 518 + LADK+D L+ + + P+GS+DPYALRR LGII II E Sbjct: 446 TMPGRILGLADKVDNLVGCFGLGLIPTGSQDPYALRRQALGIIHIITSASLSLSLSRLWE 505 Query: 519 NKIDIPLSQFIEDQNLIL-----FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +L FF RL+ ++ IR ++IEA+L D+L Sbjct: 506 KAYQAYRGRLRLGLEEVLGSLRDFFAQRLRALWGEK-IRAEVIEAVLAVGFDDLNRAFLK 564 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L F + R IL K + P + AE+ LY + Sbjct: 565 TQALAAFCQDPAFPLLHTAYLRAVNIL-----KGNLPEEKPDPSLFVHPAEQELYDTLVG 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + Y + L + +P+ FFD VLV ++ +R NRL+LL +I ++ Sbjct: 620 LEEEVAPDLKRGDYFAVLQKLTRLHDPVARFFDGVLVMDENPALRANRLALLAWIVRLVR 679 Query: 694 IVINVQKI 701 V ++ I Sbjct: 680 EVGDISCI 687 >gi|260556987|ref|ZP_05829204.1| glycyl-tRNA synthetase beta subunit [Acinetobacter baumannii ATCC 19606] gi|260409593|gb|EEX02894.1| glycyl-tRNA synthetase beta subunit [Acinetobacter baumannii ATCC 19606] Length = 689 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 204/718 (28%), Positives = 352/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + +++I+ Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQVIE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEAAPEGS----VVEANLVEDAEKALFAELQAVTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADVS 685 >gi|288942696|ref|YP_003444936.1| glycyl-tRNA synthetase subunit beta [Allochromatium vinosum DSM 180] gi|288898068|gb|ADC63904.1| glycyl-tRNA synthetase, beta subunit [Allochromatium vinosum DSM 180] Length = 691 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 215/726 (29%), Positives = 346/726 (47%), Gaps = 61/726 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D L+EI +EE+P + + + LK G+ ++ + + P RL L +KG Sbjct: 1 MSTTDLLIEIGTEELPPIALPVLSRAFTEGVRDQLKTHGIGFETVESFAAPRRLALLVKG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + P++ R GP V G KA+ GF RS G++ + + + D KG + Sbjct: 61 IQTRQPDQENVRRGPAVQAAFDAEGQPTKALLGFARSCGVEVEALGREETD--KGSWLVH 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P R ++ + A+ +P PK MRW ++RP+ + +L E Sbjct: 119 RSITPGRETAQLVPDMTEAALAGLPIPKRMRWGDRSE-----EFVRPVHWVCLLLGTES- 172 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 I + +P T GHRFH P PI + Y L E V E RR I Sbjct: 173 ----IAGTVMGLPTETRTRGHRFHHPAPIAIGQASDYAATLREQGRVEPSFELRRERIRE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA++ L D +LL+E+ LVEW Q + FD+++L +P E++ T+++NQK F Sbjct: 229 QVMSLAASNRLRARIDPELLDEVTALVEWPQALLCKFDERFLEIPPEVLIETMQSNQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L FI V+NI++ D + GN RV+ R DA FW +D Sbjct: 289 PVEDMNGALQARFIAVANIESHDP-DQVRAGNERVIRPRFSDAAFFWSQD---------- 337 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L +PL+ RL+ VVF K+GTQ + +R+ LG+++AQ I D AL Sbjct: 338 ----------LKQPLEAFAPRLET--VVFQDKLGTQAAKCARVARLGRELAQAIGVDPAL 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V+RA LSK DL T +V EFP LQG +G+ YA E+ A+E+ +PR + +PT Sbjct: 386 VERAAALSKCDLMTAMVFEFPGLQGTMGRYYAERSGEDACVSAAMEDQYRPRFAGDELPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN----------- 519 + ++LAD+LDTL+ + I +P+G+KDPYALRRA++ ++R+++E Sbjct: 446 SPCGRALALADRLDTLVGIFGIGLRPTGTKDPYALRRASIAVLRLLIETPLDLDLRDLLE 505 Query: 520 ----KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 L + ++ + +RL+ Y DR + D +E+++ N + I Sbjct: 506 RAAAGFPAGLLAEDTVEAVLGYMLERLRGYYSDRVVAVDTVESVIHTGVTNPWDLDRRIV 565 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + +F + + KRI IL + + +P L+ E+RL I++ Sbjct: 566 AVTQFRRLPAADALAAANKRIRNILLKADPADL-TEGGPNPALLVEVPEQRLAERIAELE 624 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 T ++ + Y I + L + E ++ FFD+V+V DD R NRL LL+ + + L V Sbjct: 625 TRVEPLARARDYVAILETLAELREDVDAFFDEVMVMADDPATRRNRLQLLRSLSALFLRV 684 Query: 696 INVQKI 701 ++ ++ Sbjct: 685 ADISRL 690 >gi|209964965|ref|YP_002297880.1| glycyl-tRNA synthetase, beta subunit GlyS [Rhodospirillum centenum SW] gi|238064854|sp|B6INH0|SYGB_RHOCS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|209958431|gb|ACI99067.1| glycyl-tRNA synthetase, beta subunit GlyS [Rhodospirillum centenum SW] Length = 714 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 267/740 (36%), Positives = 396/740 (53%), Gaps = 67/740 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+E++ EEIPARMQ +A ED ++ L G+ +Q + TP R+ L ++G+ Sbjct: 1 MAELLIELFMEEIPARMQVRAGEDFRRLVTDRLAAAGIQFQRAEVHTTPRRIALVVEGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPRVG+ ++A+ GFLR+ GL IS + ++D KG Y AV+ KP Sbjct: 61 ARQADVREERKGPRVGSPEQALQGFLRAAGLTDISQAE-QRDTGKGVFYFAVIEKPGGAT 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI----- 175 D L ++ AI+ +PWPKSMRW T F W+RPL IL + + + Sbjct: 120 IDALPALIDGAIRDLPWPKSMRWGTNQ-----FRWVRPLHGILALFDGQVVPGGLTIGTA 174 Query: 176 --------------IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDP 221 + + I GN T GHRF +P + V S + Y L A V+LD Sbjct: 175 EPPPETSEGNACLAGEATARVIRYGNETKGHRFLSPDTLTVTSFEDYKAKLRGAHVILDR 234 Query: 222 ECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRL 281 E R+ IL A A A GL L +D LLEE+ GLVEW V +G D++++ +P E++ Sbjct: 235 EERKQLILAGARAAAEAEGLVLKDDPGLLEEVAGLVEWPVVLVGGIDEQFMDVPAEVLTT 294 Query: 282 TIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 +++T+Q+ F T +G LA F++V+N DGGAA+V GN RV+ ARL DA FW +D Sbjct: 295 SMRTHQRYFALETTQGKLAPRFVVVANRPTVDGGAAVVAGNERVLRARLSDAKFFWDQD- 353 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA 401 L+ PL+ R R + D+ FH K+GT ER RI L +IA Sbjct: 354 -------------------LATPLETR--RQALADIKFHEKLGTMLERAERIEALAVEIA 392 Query: 402 QLIDADVALVDR---AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 + + D ++R A L KADL T +V EFPE+QG +G A Q+ DAI +H Sbjct: 393 RTLGLDTGALERVRIAARLCKADLVTGVVGEFPEVQGILGGHVARAQDLPADVADAIADH 452 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +P GP + VP + +++ V+LADK+DTL+ F+AI+EKP+GS+DP+ALRRA LG+IR+I+E Sbjct: 453 YRPLGPSDRVPADPVAVAVALADKIDTLVAFFAIDEKPTGSRDPFALRRAALGVIRLIVE 512 Query: 519 NKIDIPLSQFIEDQ--------------NLILFFHDRLKLYLHDRDIRHDLIEAILRP-E 563 N + L +L+ FF DRLK+ L ++ +RHDLI+A+ Sbjct: 513 NGLRASLLPLFGRAAVAVPAAAGETVGGDLLSFFADRLKVALKEKGVRHDLIDAVFGLGG 572 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE--ISLEISPQYLLL 621 D+L+ ++ + L F +S G L++ +R IL IEEKK+ I L Sbjct: 573 QDDLVLLLKRVDALAGFVASEDGANLLVAYRRAANILRIEEKKDGVSYSGGGIDAGRLEQ 632 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 E+ L A + + + + + LL ++ P++ FFD+V VN D +R NR Sbjct: 633 AEERALAAALDATAADLAPLLAAEDFTGAMRLLSALRGPVDAFFDKVTVNAPDAVLRANR 692 Query: 682 LSLLQYIKNIILIVINVQKI 701 L LL I++ + V + +I Sbjct: 693 LRLLARIRDTLNGVADFSRI 712 >gi|88813030|ref|ZP_01128272.1| Glycine--tRNA ligase [Nitrococcus mobilis Nb-231] gi|88789663|gb|EAR20788.1| Glycine--tRNA ligase [Nitrococcus mobilis Nb-231] Length = 702 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 210/724 (29%), Positives = 350/724 (48%), Gaps = 65/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ +EE+P + + E + +I L + + + + R + TP RL + ++G++ Sbjct: 7 DLLVELGTEELPPKGLRRLMESFASQVIAGLDQAELSHADHRCFATPRRLAVLVRGVALQ 66 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P + ER GP G +A GF RS G++ C+++ KG + Sbjct: 67 QPTRQIERKGPAWSVAYDAAGQPTQAALGFARSCGVEIEQLCRLETT--KGVWLGYRGTE 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R ++L I+ A+ ++P K MRW S ++RP+ ++ +L E++ Sbjct: 125 PGRTAAELLPEIIVQALARLPIAKRMRWGD-----SPAEFVRPVHWLILML-----GEEV 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I L + GN + GHR H P PI ++ Y L EE V+ D E RR IL Sbjct: 175 IPATLLDTVSGNFSRGHRIHHPQPIALREPLEYSDRLHEEGCVIADFEARRERILAQVTH 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + + D LL+E+ LVEW G+FD+ +L +P E + +++ +QK F R+ Sbjct: 235 CAEALGAQALWDDALLDEVTALVEWPVALAGTFDETFLRVPPEALISSMQGHQKYFPLRS 294 Query: 295 R-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + + L FI V+N+++ D A ++ GN RV+ RL DA FW +D+ Sbjct: 295 KADTGLLARFITVANLKSQDP-AQVIAGNERVIRPRLADAAFFWDQDRR----------- 342 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 +PL +R+ +L V+F ++G+ ++ +RI LG+ A ++R Sbjct: 343 ---------RPLAERIPQLK--HVLFQKQLGSLYDKSARIGALGRHFAADFGVTGDQIER 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 LSK DL TE+V EFPELQG +G+ YA E + A++E +PR + + + + Sbjct: 392 VAWLSKTDLLTEMVGEFPELQGVMGRYYAAHDGEEEAIALALDEGYRPRFAGDPIAASPL 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---- 529 +++A++ DTLI +A+ + P+G+KDP+ALRRA LG++R +E + I L Sbjct: 452 GQLLAVAERADTLIGIFALGKTPTGAKDPFALRRAALGLLRTCIEGQRSIDLEALFRLAA 511 Query: 530 -----------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-----NLLTIVDL 573 + Q ++ F DRL+ +R+ +L EA+ + Sbjct: 512 ELMPAEVDAARQIQPVLQFCLDRLRGLYLERNYPGELFEAVRTLTQQKHLIVDPWDFHRR 571 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + EF + S KRI IL ++ S + P++L E+RLY ++ Sbjct: 572 VMACAEFIQLPEATSLAASNKRIHNILRHAGADDQPFS-PVDPEHLEHPEERRLYEAVNA 630 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I+ ++ Y L + EPI+ FFD VLV D+ VR NRL+LL + + L Sbjct: 631 LAGEIESQVNAGEYTAALRHLAILREPIDRFFDTVLVMADEPSVRINRLALLACVSQLFL 690 Query: 694 IVIN 697 V + Sbjct: 691 SVAD 694 >gi|299768625|ref|YP_003730651.1| glycyl-tRNA synthetase subunit beta [Acinetobacter sp. DR1] gi|298698713|gb|ADI89278.1| glycyl-tRNA synthetase subunit beta [Acinetobacter sp. DR1] Length = 689 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 206/718 (28%), Positives = 352/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + + Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLNFAAIEAYAAPRRLALKIVDIDTAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K +L + ++I+D Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVLLLK-----DDQIVD 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQVTIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F++++L +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRANFEERFLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSPITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++DI + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDITIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEAAPEGS----VVEANLVEDAEKALFAELQAVTPAVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADVS 685 >gi|326565638|gb|EGE15801.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 12P80B1] Length = 692 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 212/726 (29%), Positives = 348/726 (47%), Gaps = 65/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +ID ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIDATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQ 699 V ++ Sbjct: 683 SVADIG 688 >gi|326567137|gb|EGE17259.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC1] Length = 692 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 212/726 (29%), Positives = 348/726 (47%), Gaps = 65/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ I+ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWIVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQ 699 V ++ Sbjct: 683 SVADIG 688 >gi|169632311|ref|YP_001706047.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii SDF] gi|238688157|sp|B0VQA1|SYGB_ACIBS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169151103|emb|CAO99765.1| glycyl-tRNA synthetase, beta chain [Acinetobacter baumannii] Length = 689 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 204/718 (28%), Positives = 353/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQVETVKGLNEAGLNFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVEQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + +++I+ Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQVIE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--TNMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQSYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEAASEGS----VVEANLVEDAEKALFAELQAVTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LTAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADVS 685 >gi|326560538|gb|EGE10919.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 103P14B1] gi|326576238|gb|EGE26153.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis CO72] Length = 692 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 210/726 (28%), Positives = 348/726 (47%), Gaps = 65/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I ++RP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFVRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQ 699 V ++ Sbjct: 683 SVADIG 688 >gi|184159639|ref|YP_001847978.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii ACICU] gi|332876124|ref|ZP_08443908.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6014059] gi|238691009|sp|B2HZR3|SYGB_ACIBC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|183211233|gb|ACC58631.1| Glycyl-tRNA synthetase, beta subunit [Acinetobacter baumannii ACICU] gi|322509549|gb|ADX05003.1| glyS [Acinetobacter baumannii 1656-2] gi|323519569|gb|ADX93950.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii TCDC-AB0715] gi|332735742|gb|EGJ66785.1| glycine--tRNA ligase, beta subunit [Acinetobacter baumannii 6014059] Length = 689 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 204/718 (28%), Positives = 352/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + +++I+ Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQVIE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEAAPEGS----VIEANLVEDAEKALFAELQAVTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADVS 685 >gi|325123646|gb|ADY83169.1| glycyl-tRNA synthetase, beta chain [Acinetobacter calcoaceticus PHEA-2] Length = 689 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 207/718 (28%), Positives = 353/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLNFVSIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K +L + ++I+D Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVLLLK-----DDQIVD 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ D E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLTALEKAYVVADFEKRQATIKQQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSPITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 TLTEAAALAAANKRVANILAKEAAPEGS----VVEANLVEDAEKALFAELQAVTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDVDLKANRLRLLAQLRNLFTAVADVS 685 >gi|23013833|ref|ZP_00053688.1| COG0751: Glycyl-tRNA synthetase, beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 688 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 274/720 (38%), Positives = 414/720 (57%), Gaps = 53/720 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI+SEEIPARMQ +AA+DL ++ L + G+ + +R Y TP RL L ++GL Sbjct: 1 MAEFLLEIFSEEIPARMQARAADDLRGMVTDGLAKNGITFDAVRSYVTPRRLVLVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRVG+ +A++GFL+STG+ Q +D KG Y AV+ + R Sbjct: 61 LAGPDVSEEKRGPRVGSPAQAMEGFLKSTGMSVEQLEQ--RDTGKGVFYFAVINRKGRPT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +V + PWPKS RW + W+RP++SIL + + ++ ++ Sbjct: 119 AEVLSEVVEATMAAFPWPKSQRWGAN-----SIRWVRPIQSILALF-----EGHVVPVEF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 G++T GHRF AP +V+ Y+ L A V+LDP RR+AIL+ A LA+A G Sbjct: 169 GPAKSGDMTCGHRFLAPESFRVKDFADYLARLRHAKVMLDPVERRHAILSGAEALAAAEG 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L D LL E+ GLVEW +GS D K++ +P E++ +++ +QK F +G LA Sbjct: 229 LTLKADDGLLAEVTGLVEWPVPLVGSIDDKFMDVPAEVLITSMRAHQKYFSLLKADGSLA 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 + F+++SN++ +DGG+A+V GN RV+ ARL DA FW D+ Sbjct: 289 SRFVVISNMETTDGGSAVVAGNQRVLRARLSDAKFFWDTDRK------------------ 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L+ R+ +L F+A +GT ++V RI L IA +I AD AL +RA L+KA Sbjct: 331 --QRLESRLPKLAER--TFYASLGTVADKVERIAGLAGNIADMIGADKALAERAARLAKA 386 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA+ EN DAI H P+GP ++ PT +S+ V+LA Sbjct: 387 DLSSELVGEFPELQGLMGRYYALNDGENPLVADAIAAHYAPQGPSDSCPTAPVSVAVALA 446 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DK+D+L+ F+AINE+P+GSKDP+ALRRA LGIIR++LEN + +PLSQ I Sbjct: 447 DKIDSLVGFFAINERPTGSKDPFALRRAALGIIRLVLENGLRLPLSQVIFLASGHFKATL 506 Query: 533 ---------NLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFS 582 +L+ FF DRL + L ++ +RHDLI AI D+L+ ++ + L F + Sbjct: 507 VQAPGEVARDLLNFFADRLAVALKEKGVRHDLITAIFSLGGEDDLVRLLKRVDALGAFLA 566 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S G L++ +R I+ IEEKK+ + + L + EK L +S G ++ + Sbjct: 567 SDDGANLLIAYRRAANIVRIEEKKDATLFTGSADLALLRQDEEKALELALSKVGQEVKNA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + L + P++ FFD+V VN D+ ++R NRL LL I + + + + K+ Sbjct: 627 LATEDFAAAMAALARLRRPVDAFFDKVTVNADEADLRVNRLKLLAMIGSAMGGLADFSKV 686 >gi|239503276|ref|ZP_04662586.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB900] Length = 689 Score = 737 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 204/718 (28%), Positives = 352/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLNFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVEQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + +++I+ Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQVIE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEAAPEGS----VIEANLVEDAEKALFAELQAVTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADVS 685 >gi|326561407|gb|EGE11757.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 46P47B1] gi|326572304|gb|EGE22299.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC8] Length = 692 Score = 737 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 211/726 (29%), Positives = 348/726 (47%), Gaps = 65/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQ 699 V ++ Sbjct: 683 SVADIG 688 >gi|326562179|gb|EGE12507.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 7169] Length = 692 Score = 737 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 211/726 (29%), Positives = 348/726 (47%), Gaps = 65/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQK------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 342 -------------QPLFELSHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQ 699 V ++ Sbjct: 683 SVADIG 688 >gi|16125591|ref|NP_420155.1| glycyl-tRNA synthetase subunit beta [Caulobacter crescentus CB15] gi|221234341|ref|YP_002516777.1| glycyl-tRNA synthetase subunit beta [Caulobacter crescentus NA1000] gi|13422689|gb|AAK23323.1| glycyl-tRNA synthetase, beta subunit [Caulobacter crescentus CB15] gi|220963513|gb|ACL94869.1| glycyl-tRNA synthetase beta chain [Caulobacter crescentus NA1000] Length = 692 Score = 737 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 270/730 (36%), Positives = 384/730 (52%), Gaps = 69/730 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++SEEIPARMQ +AA+DL + L G + + ++ + P RL L +GL Sbjct: 1 MPQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALKTFAGPRRLTLVAEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GPRVGA +A++GFLR GL D +++D VY+A + K R Sbjct: 61 LAQADRKEELKGPRVGAPPQAMEGFLRKAGLT--QDQLVERDG----VYMAFIEKKGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ PWPKSM W T W+RPLK ILC+L E ++ + Sbjct: 115 AEIIAEMVEAIVRGFPWPKSMIWGTKK-----LRWVRPLKRILCVLDRE-----VVPFAI 164 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I G++T GHRF P + D Y+ LE+ V+LD E R+ IL L A Sbjct: 165 EGIESGDVTEGHRFMGEAKPFVAKDFDEYVAGLEKHFVVLDVEERKARILEGCKTLCFAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 LELVED+ LL+E+ GL EW +G D +L LP E+IR +++T+QK F R E Sbjct: 225 HLELVEDQGLLDEVAGLAEWPTPVLGDMDPVFLSLPPEVIRTSMRTHQKYFAVRKAGEEG 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI ++NIQ +DGGA I GN++V+++RL DA FW D Sbjct: 285 LAPHFITIANIQPADGGAVIAAGNAKVLSSRLSDARFFWDEDVKVG-------------- 330 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + + +LD V FHAK+GT +RV RI L +IA L+ ADV A L+ Sbjct: 331 ------FEPWLKKLD--GVTFHAKLGTMAQRVERIVALAAEIAPLVGADVEKTKEAARLA 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +++V EFPELQG +G YA + DA+ +H KP+GP + VPT +SI V+ Sbjct: 383 KADLASQMVGEFPELQGIMGGYYARTFGLDHEIADAVRDHYKPQGPSDAVPTAPVSIAVA 442 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI----------------- 521 LADKLDTL +F+AI EKP+GSKDPYALRRA LG IRIILEN Sbjct: 443 LADKLDTLASFFAIEEKPTGSKDPYALRRAALGAIRIILENNRKIGFRMFFVPYLDRMQA 502 Query: 522 ----------DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + L+ FF DRLK+ L D+ RHDL++A+ +D+L IV Sbjct: 503 EWRAGVVTSPRLNADWLSISTELLAFFADRLKVTLRDQGKRHDLVDAVFALGDDDLARIV 562 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ L+ F + G+ L KR IL EEKK + + AE LY + Sbjct: 563 ARVEALDGFLKTDDGKNLLAGYKRASNILKAEEKKGALPTGAPAEPAADSAAEVGLYNAL 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +++++ + + L + P++ + D V VN + E RDNRL L +++ Sbjct: 623 RLLDKPLKDALAKEDFTGAMTQLAELRGPVDAYLDGVFVN--EPEHRDNRLRTLATVRDA 680 Query: 692 ILIVINVQKI 701 + V + I Sbjct: 681 MGQVADFGLI 690 >gi|88705386|ref|ZP_01103097.1| Glycyl-tRNA synthetase beta chain [Congregibacter litoralis KT71] gi|88700476|gb|EAQ97584.1| Glycyl-tRNA synthetase beta chain [Congregibacter litoralis KT71] Length = 693 Score = 736 bits (1901), Expect = 0.0, Method: Composition-based stats. Identities = 203/725 (28%), Positives = 339/725 (46%), Gaps = 60/725 (8%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M LLE+ EE+P+ + L L+ L ++G+ + + P RL + ++ L Sbjct: 1 MSQPLLLEVGCEELPSSSLEQLGIALREQLLRHLADKGLSHGASHWFAAPRRLGVLVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++ E LGP + G +A GF G I D KG Sbjct: 61 VEQADDETREALGPPLAQAKDEEGNWSRAAQGFAAKQGCTADELEII--DTPKGQRLGLK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + L TI AI +P PK MRW S ++RP+ I+ + + Sbjct: 119 QVVTGAKTSECLDTIANSAIADLPMPKRMRWGA-----SRREFVRPVHWIVLMYGDKSGF 173 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++ I GN + GHRFHAP + S +Y L +A V+ D + R + I Sbjct: 174 GEVL-----GITSGNTSKGHRFHAPQSVTFASAANYRETLRKARVIADFQERCDLIREQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A+A+G + + D+DLL E+ LVEW GSFD +L +P E + +++++QK F Sbjct: 229 EKAATALGGQALIDEDLLGEVASLVEWPVALAGSFDTAFLEVPAEALISSMQSHQKYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + L F+ VSNI++ D G ++ GN RV+ RL DA F+++D+ Sbjct: 289 VDADNKLMPNFVTVSNIESQDPGQ-VIAGNERVIRPRLADAAFFFEQDRQ---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L R+ RL VVF K+G+ E+ RI+ L K+A LI A+ + Sbjct: 338 ----------STLASRVPRLGA--VVFQKKLGSLLEKTQRIQRLAGKLAALIGANQTDTE 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL +++V EF +LQG G YA EN + DAI +H P ++P Sbjct: 386 RAAELCKADLVSDMVLEFGDLQGIAGAYYARNDGENDAVADAIAQHYWPTQAGSDLPVGD 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 +++ V+LAD+LDTL+ + I + P+GSKDP+ALRRA++ ++RII+E + + L + +E Sbjct: 446 VAVAVALADRLDTLMGIFGIGQPPTGSKDPFALRRASIAVLRIIIEKGLALDLRECLELA 505 Query: 533 ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + + DRL + I ++ A+ + ++ + Sbjct: 506 GEGFPAEVIAENAGDAVFDYMLDRLPALYENDAIAIEVFRAVRGSGSSKPADFDRRVRAV 565 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + F + E + KR+ ILA E ++ + +S L E LY I+ Sbjct: 566 HAFGERPEAEALAAANKRVSNILAKAEDRDDDAR--VSADLLSEANEIALYEAITAAERD 623 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ Y L ++ P++ FFD+V+VN +D ++ NRL+LL ++ + + + Sbjct: 624 NVNALAKADYSTALGRLATLRAPVDAFFDEVMVNAEDPALKANRLALLASLRGQFMAIAD 683 Query: 698 VQKIV 702 + ++ Sbjct: 684 ISQLA 688 >gi|326568416|gb|EGE18496.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC7] Length = 692 Score = 736 bits (1901), Expect = 0.0, Method: Composition-based stats. Identities = 211/726 (29%), Positives = 348/726 (47%), Gaps = 65/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + D+Y L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADYYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL+E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQK------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 342 -------------QPLFELSHHLKTQ--IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDQLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGIALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQ 699 V ++ Sbjct: 683 SVADIG 688 >gi|238685535|sp|A3M9C2|SYGB_ACIBT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|193078508|gb|ABO13516.2| glycyl-tRNA synthetase beta chain [Acinetobacter baumannii ATCC 17978] Length = 689 Score = 736 bits (1900), Expect = 0.0, Method: Composition-based stats. Identities = 204/718 (28%), Positives = 352/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + L E G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVDVDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + +++I+ Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQVIE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDSTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSSITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 TLPEAAALAAANKRVANILAKEAAPEGS----VIEANLVEDAEKALFAELQAVTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAVADVS 685 >gi|296133896|ref|YP_003641143.1| glycyl-tRNA synthetase, beta subunit [Thermincola sp. JR] gi|296032474|gb|ADG83242.1| glycyl-tRNA synthetase, beta subunit [Thermincola potens JR] Length = 698 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 223/740 (30%), Positives = 354/740 (47%), Gaps = 81/740 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY----QNMRQYWTPHRLFLY 55 M DFLLEI +EEIPAR A L L+KE ++ Y TP RL + Sbjct: 1 MAKDFLLEIGTEEIPARFMDDALVQLGAKTGELIKEYRFKTPDEKGAVQVYGTPRRLVVS 60 Query: 56 LKGLSPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 + L E GP V A KA GF RS G+ + K+ G+ Sbjct: 61 ISNLGETQESAESEAKGPSVKAAYDEQGQPTKAALGFARSQGVAVED--LVVKNTGAGEY 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 AV R+ R + ++L I + +PK MRW+ ++RP++ IL + Sbjct: 119 VFAVKREEGRNVAELLPEFCLQLINGLSFPKPMRWADHE-----MRFVRPIRWILALY-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECRRNA 227 E +I+ + G T GHRF ++ + Y R +E+ V++DPE R+ Sbjct: 172 ---GEDVINFQVAGTVSGRTTKGHRFLGKGEAEIANPADYFRRIEKELFVVIDPEERKRR 228 Query: 228 ILNDAHRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 I + L G ED D LL+E++ LVE+ GSF+ +L LP+E++ ++ Sbjct: 229 ITREVEALTKQAGGYFKEDDDFRELLDEVVHLVEYPVALTGSFEPDFLKLPKEVVVTPMR 288 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 +Q+ F +G L + FI +SN +D + +GN +V+ ARL DA F+ D Sbjct: 289 EHQRYFPVEKEDGQLLDKFIAISNGINND---LVREGNEKVLRARLADAKFFYDED---- 341 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 L PL + + +L +VF +GT ++V RI LG +A+ + Sbjct: 342 ----------------LKVPLAENVDKLK--KIVFQESLGTVYDKVERIIKLGTYLAEAL 383 Query: 405 DAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 D + RA L KADL + +V EFPELQG +GK+YA E + +AI EH P Sbjct: 384 QIDGAVQETIKRAGYLCKADLVSNMVYEFPELQGVMGKDYARHSGETDAVAEAIFEHYLP 443 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P K +S+ADK+DT++ +A+ +P+GS+DPYALRR LGI +I+ + + Sbjct: 444 RFAGDILPEAKAGQILSIADKMDTVVGCFAVGIQPTGSQDPYALRRQALGICHVIVNSGL 503 Query: 522 DIPLSQFIED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 + LS ++ ++ FF R+K L ++ I +D+IEA+L Sbjct: 504 RVSLSAMVKRAYDNYEGKIEAKLNKEETVAEVLEFFRQRIKNILENKAISYDVIEAVLAS 563 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 D+L+ V+ + L + +K L + R+ + E + +I P L E Sbjct: 564 GYDDLIDTVNRAEALTNLRNQEIFDKLLRAYNRVANLANKAE------TEDIEPALLKEE 617 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AEK LY + + +Y Q+ + +PI+ +F+QV+V VDD +++NRL Sbjct: 618 AEKALYKEFLTASEEFRTYLKEGQYRQLFQRFALLQQPIDNYFEQVMVMVDDERIKNNRL 677 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL+ I N++L + ++ KIV Sbjct: 678 ALLKQITNLMLPIADLTKIV 697 >gi|262373565|ref|ZP_06066843.1| glycyl-tRNA synthetase beta subunit [Acinetobacter junii SH205] gi|262311318|gb|EEY92404.1| glycyl-tRNA synthetase beta subunit [Acinetobacter junii SH205] Length = 688 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 201/718 (27%), Positives = 351/718 (48%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L LK+ G+ + + Y P RL L + + Sbjct: 6 LFELGCEELPPKSLKTLRDALKAETEKGLKDAGLNFAAIEAYAAPRRLALKIVDIDAAQA 65 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 66 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCFLKDVKG 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + +++++ Sbjct: 124 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQVVE 173 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I + +LA Sbjct: 174 ATIQDHKAGNVTYGHRFHAPEAVVLAHANDYLATLEQAYVVANFEKRQATIQDQVKKLAD 233 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 234 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 293 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI +SNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 294 KLQPYFITISNIESKDPIQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 337 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ RI L ++ + A++A ++A +L Sbjct: 338 -----QPLASRKEKL--ANMVFQAQLGTLWDKSERIAKLAVALSPITGANIADAEKAALL 390 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA L+ EN +A+ E P+ + +P T+ Sbjct: 391 AKCDLTSELVGEFPELQGIAGTYYARLEGENHEVAEALGEQYLPKFAGDVLPQTNTGTTI 450 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 451 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNFALQGYG 510 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+I+A+ + L + +N F Sbjct: 511 DVVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVIQAVQALAPKSPLDFDKRVTAVNHFR 570 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ AEK LYA + ++ Sbjct: 571 TLPEAAALAAANKRVANILAKEATPEG----AVVEANLVETAEKALYAELQALTPVVEPL 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y + L ++ PI+ FF+ V+V DD E++ NRL LL ++++ + +V Sbjct: 627 LAARNYTEALSKLAALRAPIDAFFEGVMVMADDAELKANRLRLLAQLRDLFTAIADVS 684 >gi|262370018|ref|ZP_06063345.1| glycyl-tRNA synthetase subunit beta [Acinetobacter johnsonii SH046] gi|262315057|gb|EEY96097.1| glycyl-tRNA synthetase subunit beta [Acinetobacter johnsonii SH046] Length = 689 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 208/718 (28%), Positives = 347/718 (48%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLAFDSIEAYAAPRRLALKIINVDGAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITADQVSTFQ--AGKVEKVCYLKDVQG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + ++D Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DNDVVD 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP I + + D Y+ L A V+ + E R+ I LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAITLANADAYLDALRAAKVVANFEERQAIIDQQVKTLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DL +E+ LVEW SF++++L +P+E + T++ NQK F + Sbjct: 235 EVNAIAIVPADLRDEVTALVEWPVALRASFEERFLAVPQEALITTMQDNQKYFCLVNADN 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT + RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWNKSERIAKLAVALSAITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENDEVAEALGEQYLPKFAGDVLPQTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 +LAD+LDTL + I + P+GSKDP+ALRR+ +GI+R++ EN +DI + + I+ Sbjct: 452 ALADRLDTLTGIFGIGQAPTGSKDPFALRRSAIGILRLVTENNLDISIEELIKLALASYG 511 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+I+A+ + L + +N F Sbjct: 512 DVLKDHDKTLADAVAFLEGRYRAKYEDQGVAVDVIQAVQALSPKSPLDFDKRVTAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S + + KR+ ILA E + EI L+ +AEK LYA I +Q Sbjct: 572 SLPEAAALAAANKRVANILAKEAA----PTGEIVESKLVEDAEKALYAEIQAILPVVQPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y + L ++ PI+ FFD V+V +D E++ NRL LL ++++ V ++ Sbjct: 628 LAAKDYTEALSKLAALRAPIDAFFDGVMVMAEDAELKANRLRLLAQLRDLFTSVADIS 685 >gi|170747570|ref|YP_001753830.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] gi|238688771|sp|B1M1W2|SYGB_METRJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170654092|gb|ACB23147.1| glycyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] Length = 699 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 306/697 (43%), Positives = 412/697 (59%), Gaps = 40/697 (5%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ +AAEDL ++ L G +Y+ R + TP RL L++ GL Sbjct: 1 MPDLLLELRSEEIPARMQRRAAEDLKKLVTDALVARGFLYEGARAFSTPRRLALHIAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EER GPRVGA + A+ GFL+ GL ++ DPKKG+ YLAV+ +P R Sbjct: 61 ARGEAVREERRGPRVGAPEAAVQGFLKGAGLASLDQATTVTDPKKGEFYLAVIERPGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL +P ++ PWPKSMRW + + W+RPL+SI+ E ++I + + Sbjct: 121 LDVLAEFLPEIVRSFPWPKSMRWGAASAEPGSLRWVRPLQSIVATFGPETETPEVIPVSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +TYGHRF AP I+V+ D YI+ LE A V+LD + R++ IL+DA LA A G Sbjct: 181 GGIAAGTVTYGHRFLAPEAIEVRRFDDYIQALERAKVVLDADRRKDVILHDARDLAFARG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 L+LVED+ LLEE+ GLVEW V MGSFD+ +L +P E IR TI+ NQKCFV R L Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGSFDESFLDIPAEAIRATIRANQKCFVLRKGGSEDL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A FILVSN+ A+DGG AI GN RVV ARL DA FW+ D+ Sbjct: 301 APAFILVSNLVATDGGQAITAGNERVVRARLSDAKFFWETDK------------------ 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L+ R+ +LD +VFH K+GTQGER++RI L K +A + AD AL +RA L+K Sbjct: 343 --ATRLEDRLPKLDA--IVFHEKLGTQGERIARIAALAKDLAPRVGADPALAERAARLAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +G++YA LQ E+ S C AIEEH KP GP + VPT+ +SI V+L Sbjct: 399 ADLVTEMVGEFPELQGLMGRKYAALQGEHDSVCAAIEEHYKPLGPSDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI-------------ILENKIDIPLS 526 ADKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR+ + + Sbjct: 459 ADKLDTLAGFWAIDEKPTGSKDPFALRRAALGVIRLILDRGLRLRLLEQVGAADRSLAGR 518 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAK 585 + ++L+ FF DRLK+YL D+ RHDLI+A+ P D+LL +V ++ L F + Sbjct: 519 AGADARDLLGFFADRLKVYLRDQGARHDLIDAVFALPGQDDLLMVVRRVEALAAFLDTED 578 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE---KRLYAVISDFGTHIQESM 642 G+ L KR IL IEEKK+ L E + L ++ ++ Sbjct: 579 GKNLLAGYKRAANILRIEEKKDGRAYDAAPDAALAAAGEPAERALAEALAKARETASAAV 638 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + + L ++ P++ FF V VN D ++R+ Sbjct: 639 AREDFSGAMQALSTLRAPVDAFFQDVTVNAPDPKLRE 675 >gi|326574910|gb|EGE24840.1| glycyl-tRNA synthetase subunit beta [Moraxella catarrhalis 101P30B1] Length = 692 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 209/726 (28%), Positives = 347/726 (47%), Gaps = 65/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I ++RP+ ++ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFVRPVHWVVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++L +E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELFDEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQ-------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K+ + N L +F K+GT E+ RI L IA I A+ Sbjct: 341 -KQPLFELNHHLKTQ-------------IFQDKLGTLWEKSERIANLAAHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G YA L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYARLNHEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGVALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLRVSLSHLV 506 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQ 699 V ++ Sbjct: 683 SVADIG 688 >gi|157693025|ref|YP_001487487.1| glycyl-tRNA synthetase subunit beta [Bacillus pumilus SAFR-032] gi|157681783|gb|ABV62927.1| glycine--tRNA ligase beta subunit [Bacillus pumilus SAFR-032] Length = 681 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 212/719 (29%), Positives = 358/719 (49%), Gaps = 63/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR ++ + L + K + + ++++ + +P RL + + G++ Sbjct: 5 DVLLEIGLEEMPARFMSESTKQLGEKVKAWFKTQNISFEDVTLFNSPRRLAVLVTGVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + EE GP G KA +GF R G T D K+ KG Y+ V + Sbjct: 65 QEDIKEEAKGPAKKIAQDAEGNWTKAAEGFARGQGAST-DDLYFKE--IKGVDYVHVQKF 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + ++D+L + + +PK+MRW + +IRP+K I+C+ E+ Sbjct: 122 EEGKQVKDLLPA-LGEIATSLSFPKNMRWGSKD-----LRYIRPIKWIVCLF-----GEE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ +D+ + G T GHRF I + S Y + L + V+ D + R+ AI + Sbjct: 171 IVPVDIAGVKSGRETRGHRFLGKAAI-IDSPASYEQTLRDQFVIADSDKRKQAITEQLNA 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LAS G + D +LLEE+ LVE+ V GSF++++L LPEE++ T+K +Q+ F + Sbjct: 230 LASEKGWVIPVDPELLEEVNNLVEYPTVLSGSFEEEFLALPEEVLVTTMKEHQRYFPVKN 289 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V N + + + +GN +V+ ARL DA F+K D+ + Sbjct: 290 EQGELLPHFITVRNGNS-EALENVARGNEKVLRARLSDAAFFYKEDEKLV---------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---V 411 ++ + +LD VVFH K+GT G+++ R+ + ++A + AD V Sbjct: 339 ----------IEDNIKKLD--KVVFHEKLGTIGDKLKRVTNIATRLAAHVGADEETTERV 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +SK DL T++V EFPELQG +G++YA E+ +I EH PR + P+ Sbjct: 387 ARAASISKFDLVTQMVYEFPELQGIMGEKYAKALGEHEEVAKSINEHYMPRFAGDEAPST 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 I V++ADKLD++ +F++I+ P+GS+DPY LRR GI++I+L+ +I + + Sbjct: 447 LIGAIVAIADKLDSICSFFSIDVIPTGSQDPYGLRRQASGIVQILLDRHWNISFKELLAL 506 Query: 532 QNL--------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + I F RLK L IRHD+++A+L E+ +V L E Sbjct: 507 AQVEEAHETALIEFLTHRLKYVLQAEHIRHDVVDAVLDVEDIEPYAVVKKAAVLEESVKQ 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 ++ + R+ I E EI P+ E E++LY T ++E + Sbjct: 567 ESFKETAEALGRVISISKKGE------DAEIQPELFENEHEQKLYEAYQQVETAVKEHVA 620 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +Y + L ++ PI +FD +V+ DD +++ NRL+ + + +I N+ ++ Sbjct: 621 AGQYSAALEALDTLKTPIVHYFDHTMVHADDEKLKRNRLAQMVKLAKVIQSFANMNNLI 679 >gi|77918213|ref|YP_356028.1| glycyl-tRNA synthetase subunit beta [Pelobacter carbinolicus DSM 2380] gi|123743123|sp|Q3A8N5|SYGB_PELCD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|77544296|gb|ABA87858.1| glycyl-tRNA synthetase beta chain [Pelobacter carbinolicus DSM 2380] Length = 688 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 201/726 (27%), Positives = 337/726 (46%), Gaps = 66/726 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LEI +EEIPA A DL ++ L+ + ++ +R + TP RL L + G++ Sbjct: 3 AELFLEIGTEEIPAGFLPTAMADLERLIRKELETGRIGFETVRTFATPRRLVLAVTGVAS 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + GP V G KA GF RS G++ + + D KG+ Sbjct: 63 GQARQEVTASGPSVSVAFDADGNPTKAALGFARSNGVEVSDLERRETD--KGEYLFVSKV 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L ++P I +P+ KSMRW + RP+ I+ + + Sbjct: 121 VEGRPTGELLPEMLPRIIAAIPFKKSMRWKDLD-----IRFARPMHWIVALFDG-----Q 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + GN++YGHRF AP +V SL+ Y+ + E+ V++DP RR I + Sbjct: 171 VVPFSYGNLTSGNLSYGHRFMAPDAFEVSSLEQYLVEAEKHFVIVDPVKRRQIISDQLAE 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + G +L D DLL+E+ LVE+ MG F+ YL LP EL+ ++ +Q+ F Sbjct: 231 VVGRCGGKLNPDDDLLDEVAFLVEYPAAVMGGFEDSYLQLPPELLITVMREHQRYFTVVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI +SN +A D + QGN RV+ ARL DA+ FW D+ Sbjct: 291 DSGKLLPRFITISNTRAED-LTVVQQGNERVLRARLSDAMFFWNEDRKV----------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-IDADVALVDR 413 L+ R+ L +VV+ AK+GT E+V R + L ++AQ + V L +R Sbjct: 339 ---------KLESRLDALK--NVVYQAKLGTSYEKVMRFKTLAVELAQQQVPEVVELTER 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+K DL T +V EF ELQG +G+EYA+L E+ AI EH P +P + + Sbjct: 388 AASLAKCDLETGMVFEFTELQGVMGREYALLDGEDPRVARAIFEHYLPVQAGGELPGDDV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 VS+ADK+D++ + + P+G+ DP+ALRR+ +GI+ IIL+ + L +E Sbjct: 448 GAFVSIADKIDSICGCFGVGLIPTGTADPFALRRSAIGILNIILDRGYRLSLPALVERSL 507 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ F R L + + +D+++A+L ++ + + +K Sbjct: 508 GLLADKLTRPATEVAADVLEFLRLRFFNMLTAQGLPNDVVDAVLSAAFEDPVDALQRVKG 567 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L F + E ++ KR+ I+ + + + E L+ + + Sbjct: 568 LASFREEGEFEALAVTFKRVVNIVK------GGVDTSVDSALFEADCEAGLFDALQNVTG 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + + P++ F+ V+V D V+ NRL+LL + + + Sbjct: 622 RFEQFVAEGAYLDALRTVGGLRSPVDALFEGVMVMSPDEAVKTNRLALLTAVARLFQGIA 681 Query: 697 NVQKIV 702 + KI Sbjct: 682 DFSKIA 687 >gi|78224137|ref|YP_385884.1| glycyl-tRNA synthetase subunit beta [Geobacter metallireducens GS-15] gi|123729181|sp|Q39RG5|SYGB_GEOMG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|78195392|gb|ABB33159.1| glycyl-tRNA synthetase beta chain [Geobacter metallireducens GS-15] Length = 686 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 212/727 (29%), Positives = 341/727 (46%), Gaps = 67/727 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LEI +EEIPA KA D+ +L L+ + + ++R TP RL L +KGL Sbjct: 1 MKELFLEIGTEEIPAGFIPKAMADMEALLAKELENARISFDDIRTLGTPRRLALTVKGLP 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ +GP G +A +GF R G+ S + + KG+ AV Sbjct: 61 TVQPDAEITAMGPARNVAFDAEGKPTRAAEGFARGQGVDVASLTLVATE--KGEYVAAVR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ R + ++L I+P + +P+ KSMRW + RP+ I+ + Sbjct: 119 KESGRPVPELLAEILPRLVANIPFRKSMRWGALD-----VRFARPIHWIVALFDG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ I G I+ GHRF A P V+ HY+ + E V+ DPE R+ I + H Sbjct: 169 VVVPFTFGNIESGTISRGHRFMANQPFPVRDFAHYLEECERHFVIPDPERRQEIIRREIH 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R+A A G L+ D+ LLEE+ L E+ G+F ++L +P E++ +++++Q+ F Sbjct: 229 RVAKAAGGHLLPDEGLLEEVSFLCEYPSAVHGTFSAEFLKVPREVLITSMRSHQRYFSIV 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI ++N D +V+GN RV+ ARL DA F++ DQ Sbjct: 289 DDAGKLMPGFITINNTLTEDP-TVVVKGNERVLRARLSDARFFFEEDQKV---------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVD 412 L+ R+ L +VV+ K+GT E++ R R L + +A L++ V V Sbjct: 338 ----------KLETRVESLK--NVVYQQKLGTSFEKMERFRALAEGLADLLNPAVKVKVS 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 +A L KADL + +V EFPE+QG +G+EYA+++ E+ AI EH P +P + Sbjct: 386 QAAFLCKADLVSGMVGEFPEVQGIMGREYALIEGEDAEVAAAIAEHYLPTQAGGELPASD 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ----- 527 I VS+ADKLDT+ + + P+GS DPYALRR+ LGII IIL+ + L + Sbjct: 446 IGAFVSMADKLDTICGCFGVGLIPTGSADPYALRRSALGIINIILDKGYRLSLEEQVDKA 505 Query: 528 ------------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++ FF R + DR + + +L+ I Sbjct: 506 LGLLAAKLTRPAVDVKADVLEFFRGRFVNLMADRHASDAVDA-AVAAGCADLVDAAARIA 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L+EF S E ++ KR+ I+ + + AE L + Sbjct: 565 ALSEFRSHPDFEPLAVAFKRVGNIVKEG------VDAPVDTALFQDAAEGLLNDAVQGVA 618 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++E + Y + + ++ P++ FFD+V+V +D VR NRL+LL I ++ + Sbjct: 619 VSVREKIATGAYLEALTEIAALRGPVDTFFDKVMVMAEDERVRTNRLALLTGIARMLGAI 678 Query: 696 INVQKIV 702 + KI Sbjct: 679 ADFAKIA 685 >gi|307243671|ref|ZP_07525811.1| glycine--tRNA ligase, beta subunit [Peptostreptococcus stomatis DSM 17678] gi|306492880|gb|EFM64893.1| glycine--tRNA ligase, beta subunit [Peptostreptococcus stomatis DSM 17678] Length = 689 Score = 735 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 225/728 (30%), Positives = 365/728 (50%), Gaps = 67/728 (9%) Query: 1 MPDFLL-EIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LL EI EE+P+R L L L E V + + Y TP RL L ++GL Sbjct: 1 MNNYLLYEIGVEEMPSRFVESTLGQLKDNLTRALTENRVGFSEIETYATPRRLVLVVRGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G+ KA GF++ GL KD + A Sbjct: 61 ADRQADLEEEVKGPSKKIALAEDGSFTKAALGFMKGKGLS--EKDVYFKDLDGTEYIYAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 L++ E +L ++ ++ V +PKSMRW + ++RP++ +L ++ Sbjct: 119 LKETGEDTEKILCDVLGEIVKAVVFPKSMRWGGKN-----MRFVRPIRWLLALM-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++++ I N T GHRF I+V S++ Y+ LEE V+LD R+ I + Sbjct: 169 DRVVPVNMEGIVASNKTVGHRFLGSKSIEVISIEDYLAKLEENYVILDQAKRKAIIRDQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++A+++ + D+DLLEE+ +VE+ F G FDK+Y LP+E+++ +K +Q+ F Sbjct: 229 DKVAASINGRVDMDEDLLEEVTYIVEYPTAFYGEFDKEYASLPKEVVKTPMKAHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI V N + +GN +V+ ARL DAL F+K D+ Sbjct: 289 VDDRGELLANFIAVRNGN-DYMIENVKKGNEKVLEARLADALFFFKEDRK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVAL 410 K L ++LD VVF K+GT ++ R+ L KIA IDA L Sbjct: 338 ----------KALVDYRSQLDT--VVFQEKLGTLLDKSERLYKLAGKIADEIDAGIKKDL 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA L KADL T +V EF ELQG +G EY+ L E+ +AI EH PR + +P Sbjct: 386 LERAAYLCKADLVTSMVFEFDELQGYMGMEYSKLDKEDPIVSEAIYEHYMPRFSGDEIPQ 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ DK+DT+ F+AI +P+GS DP+ALRR LGI+ I+LE I++ +++ + Sbjct: 446 SAEGAILSIVDKIDTIAGFFAIGIQPTGSADPFALRRQCLGILTILLEKNIELDIAKLAD 505 Query: 531 DQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ FF++R ++ D IR+D+++A+L + N+ + Sbjct: 506 LALDQYAGVDFDKDVVVDQIVAFFNERTRVMFKDLGIRYDVVDAVLASDEKNMSDLYARA 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + +N + + L++ R+ + E L+I LL AEK LYA Sbjct: 566 QAINAWIDNPSLNDMLVAFNRVSTLAEKAE------GLDIKEATLLEAAEKDLYAKFVLV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I++ M K+Y + D S+ I+ FFD V+V ++ +VR+NRL+LL I +L Sbjct: 620 EKEIEDLMGQKKYTESLDSFASLKPAIDAFFDTVMVMDENLDVRNNRLALLANIYKAMLK 679 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 680 ICDLSKIV 687 >gi|257886869|ref|ZP_05666522.1| glycyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257822923|gb|EEV49855.1| glycyl-tRNA synthetase [Enterococcus faecium 1,141,733] Length = 694 Score = 735 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 64 PERQADSEEEVKGPAKKIALDVDGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 121 TKYTHGKESKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTIAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 339 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKTAVATAIREHYMPISSEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 507 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPELFENDAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 624 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|254372696|ref|ZP_04988185.1| hypothetical protein FTCG_00261 [Francisella tularensis subsp. novicida GA99-3549] gi|151570423|gb|EDN36077.1| hypothetical protein FTCG_00261 [Francisella novicida GA99-3549] Length = 694 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 368/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRSLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENNYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELAKAAANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|261405620|ref|YP_003241861.1| glycyl-tRNA synthetase subunit beta [Paenibacillus sp. Y412MC10] gi|261282083|gb|ACX64054.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus sp. Y412MC10] Length = 691 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 204/734 (27%), Positives = 345/734 (47%), Gaps = 76/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A E L L+ L+ + + + + TP RL ++++ + Sbjct: 1 MSKDLLFEIGLEEVPARFLRAAMEQLQDKLVKWLETSRIAHGEVTAFATPRRLAVWVQNV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF +S G+ S G Y+ V Sbjct: 61 ADKQEDVSEEVKGPSRKIALDDSGQWSKAALGFAKSQGVDPES---FTFKELGGVEYIYV 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L + + + +PK+MRW F ++RP+K ++ +L +E Sbjct: 118 TKNSVGVDTKSILSEGLLGILTSMTFPKNMRWGAHE-----FKFVRPIKWMVAMLGSET- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +DL++ + GN+T GHRF + + Y L E V++D R+ I++ Sbjct: 172 ----VDLEITGVKAGNVTRGHRFLGGEAV-IPEASAYRDVLREQHVIVDVNERQEMIVSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + DLLEE++ LVE V GSFD +L +P+E++ +++ +Q+ F Sbjct: 227 IQALAQEKDWNIAIKDDLLEEVLFLVETPTVLYGSFDSSFLHIPQEVLITSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G L F+ V + + I +GN +V+ ARL DA F++ DQ Sbjct: 287 VLDKQGQLLPYFVTVRSGDSR-SLDVIARGNEKVLRARLSDAKFFYEEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + +++L+ +VFH ++GT G++V RIR + +++ ++ Sbjct: 338 ------------QIKDALSKLE--SIVFHEELGTIGDKVRRIRRISDQLSAKLNVSADAA 383 Query: 412 D---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 D RA + K DL T++V EFPELQG +G++YA E A+ EH +PR ++V Sbjct: 384 DSVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEHVAKAVFEHYQPRFAGDSV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ + VS+ADK+DT++ ++I P+GS+DPYALRR GI++IILE+K+ + LS Sbjct: 444 PSTTVGSIVSIADKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQIILEHKLPVTLSDV 503 Query: 529 IEDQNLIL-------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF R+K L + D R+D+++A++ D++++ Sbjct: 504 FGVALEVHENIRVLKRSTDEIRKDLKEFFGLRVKKLLSE-DQRYDVVDAVITAGFDHVVS 562 Query: 570 IVDLIKHL-NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +V L N S + + S R+ + A K ++ + E +LY Sbjct: 563 VVSRGHALMNAVESVQDFKTTVESFNRVSNLAAKAGKA------AVNAELFTESEENKLY 616 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ++ + LL + EPI FFD V+V +D VR NRL+LL I Sbjct: 617 EAWNAIRADYHAALQAADGERSLSLLSGLREPITGFFDSVMVMAEDEAVRANRLALLSGI 676 Query: 689 KNIILIVINVQKIV 702 + + K+V Sbjct: 677 DGDLKRYADFTKLV 690 >gi|197117039|ref|YP_002137466.1| glycyl-tRNA synthetase subunit beta [Geobacter bemidjiensis Bem] gi|238690872|sp|B5ED84|SYGB_GEOBB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|197086399|gb|ACH37670.1| glycyl-tRNA synthetase, beta subunit [Geobacter bemidjiensis Bem] Length = 687 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 209/727 (28%), Positives = 341/727 (46%), Gaps = 68/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LEI EEIPA KA D+ +++ + Y + TP RL L +KG+ Sbjct: 1 MAKDLFLEIGCEEIPAGFVPKAMADMELLIKKEFDSARIEYGEIVTLGTPRRLVLAVKGV 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ +GP G KA GF R G+ + + KG+ AV Sbjct: 61 AERQPDAELTAMGPAKSHAYDADGNPTKAAQGFARGQGIDVSQLKLVTTE--KGEYLAAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L ++P I +P+ KSMRW+ + RP+ I+ + Sbjct: 119 KSEIGRATAELLPELLPRLIGNIPFKKSMRWADFD-----VRFARPIHWIVALFDG---- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 K++ I G+ + GHRF A V+ L HY+ + E V+ DP R+ I + Sbjct: 170 -KVVPFSFGNIDSGSASRGHRFMANTSFPVRDLAHYLEECERHFVIPDPNKRKEIIRAEI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A ++ D+ LLE++ LVE+ G+F +L +P E++ +++ +Q+ F Sbjct: 229 ERVAKQAKGNVLPDEALLEQVSYLVEYPSAVHGTFSPDFLVVPREVLITSMREHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI ++N D +V+GN RV+ ARL DA F+ D Sbjct: 289 VDDEGKLLPGFITINNTITEDP-QVVVKGNERVLRARLSDARFFFDEDHKV--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 L+ R+ L VV+ AK+GT E++ R R LGK++AQ ++ V V Sbjct: 339 -----------RLEARVESLK--SVVYQAKLGTSYEKMERFRELGKRLAQRLNPAVTKEV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA L KADL + +V EFPE+QG +G+EYA+ E + +AI EH P +P + Sbjct: 386 ERAATLCKADLVSGMVGEFPEVQGIMGREYALHDGEEKAVANAIAEHYLPTQAGGELPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I VSLADK+DT+ +++ P+GS DPYALRR+ LGII IIL+ PLS F++ Sbjct: 446 DIGAFVSLADKMDTICGCFSVGLIPTGSADPYALRRSALGIINIILDKGYREPLSDFVKA 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++++ FF R + DR D +EA++ D+L+ I Sbjct: 506 SLDLLSAKATRPLAEVQKDVLDFFRGRFVNLMADR-FPSDAVEAVVSVSFDDLVEAAAKI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F + ++ KR+ I+ + +S + AE L+ ++ Sbjct: 565 EALAGFRNRDDFGPLAVAFKRVCNIVKDG------VDTPVSTELFQDAAEGELHQALTQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++ Y + ++ +++FF++V+V +D VR NRL+LL I + Sbjct: 619 SGKVAAALKKADYLAALTEIATLKPAVDLFFEKVMVMAEDERVRQNRLALLTGIARLFGS 678 Query: 695 VINVQKI 701 + + ++ Sbjct: 679 LADFSRL 685 >gi|254515956|ref|ZP_05128016.1| glycyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR5-3] gi|219675678|gb|EED32044.1| glycyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR5-3] Length = 694 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 199/721 (27%), Positives = 338/721 (46%), Gaps = 59/721 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 LLEI EE+P+ + L ++ L E+G+ + + P RL + + L Sbjct: 6 LLLEIGCEELPSSSLEQLGIALHANVVAKLAEKGLSHGASHWFAAPRRLAVLVDDLVDQG 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ +E LGP V G +A +GF G+ + D KG Sbjct: 66 ADETKEALGPPVAQAKDADGNWTRAAEGFAAKQGVSADDLELV--DTPKGQRLGFKQVVS 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + L +V AI +P K MRW ++RP+ I+ + E ++ Sbjct: 124 GAQTRECLGELVNEAIADLPIAKRMRWGAARR-----EFVRPVHWIVLMYGDEHGFGNVL 178 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GNI+ GHRFHAP PI+++S Y + A V+ D + R + I A Sbjct: 179 -----GISSGNISKGHRFHAPDPIEIKSAKEYPSLMRNAWVIADFQERSHLIREQVDAAA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +A+G + + D DLL E+ LVEW GSFD +L +P E + +++++QK F Sbjct: 234 AALGGQALIDTDLLGEVASLVEWPVALAGSFDTAFLEVPAEALISSMQSHQKYFPVVDAS 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L F+ VSNI++ D G ++ GN RV+ RL DA F+++D+ + Sbjct: 294 GTLMPNFVTVSNIESRDPGQ-VIGGNERVIRPRLADAAFFFEQDRQH------------- 339 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L R++RL VVF ++G+ ++ R++ L ++A L AD +RA Sbjct: 340 -------SLASRVSRLGA--VVFQKQLGSLLDKTQRVQRLAGELAALTGADKTQAERAAE 390 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L KADL +++V EF ++QG G YA E+ + DAI +H P +P +++ Sbjct: 391 LCKADLVSDMVLEFADMQGIAGAYYARNDGEDSAVADAIAQHYWPTQAGSELPRGDVAVA 450 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------- 528 V+LAD+LDTL+ + I + P+GSKDP+ALRRA++ ++RI++E ++ + L Sbjct: 451 VALADRLDTLLGIFGIGQPPTGSKDPFALRRASIAVLRIMIEKQLTLDLRDCLAIAKAGF 510 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + + DRL +I ++ A+ + ++ + F Sbjct: 511 AEGVISDEAPEAVFNYMLDRLPALYESDNIPIEVFRAVRGSGSSRPSDFDRRVRAVQAFG 570 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + E + KR+ ILA E +R+ LE+S L E L I+ + + Sbjct: 571 QRPEAEALAAANKRVSNILAKAE--DRDQGLEVSAHLLKEPQETALSEAIAAAASDNVNA 628 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + Y L ++ EP++ FFD V+VN +D ++ NRL+LL ++ + + ++ ++ Sbjct: 629 LANADYASALSRLATLREPVDAFFDGVMVNAEDPALKANRLALLAQLREQFMHIADISQL 688 Query: 702 V 702 Sbjct: 689 A 689 >gi|257895443|ref|ZP_05675096.1| glycyl-tRNA synthetase [Enterococcus faecium Com12] gi|257832008|gb|EEV58429.1| glycyl-tRNA synthetase [Enterococcus faecium Com12] Length = 694 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 121 TKYTHGKESKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 339 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 507 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPKLFENDAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 624 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|296113853|ref|YP_003627791.1| glycyl-tRNA synthetase beta subunit [Moraxella catarrhalis RH4] gi|295921547|gb|ADG61898.1| glycyl-tRNA synthetase beta subunit [Moraxella catarrhalis RH4] Length = 692 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 212/726 (29%), Positives = 346/726 (47%), Gaps = 65/726 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ +EE+P + + L + LL ++ + + ++ + P RL L + G+ Sbjct: 1 MTTILFELGTEELPPKNLKTLRDALKNSVGTLLNDQNISFDDIHAFAAPRRLALTITGVG 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQ----TISDCQIKKDPKKGDVY 109 P++IE + GP V A +A GFL+ ++ D D KKG+ Sbjct: 61 EFQPDRIETKKGPSVKAAFDDAGNLTRAGQGFLQGLNATGRNLSVKDLGRIAD-KKGEYI 119 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L I D++ I+ A+ +P K MR I +IRP+ I+ + Sbjct: 120 AYDLTIKGEKITDLMPNILQKALDDLPIAKRMRSG-----IDRHEFIRPVHWIVLM---- 170 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 + + +I+ ++ GN + GHR+H+P + DHY L+ V+ D + R+ IL Sbjct: 171 -SDDVVIEATIQGHKTGNQSRGHRYHSPDFFAIDHADHYENLLKNHHVIADFDQRQADIL 229 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 LA V + ++LL E+ LV+ SF +++L +P+E + T++ +QK Sbjct: 230 AQVKTLADDVNGTAIMPQELLNEVTALVDLPVALRASFPERFLAVPQEALISTMQADQKY 289 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L FI +SNI + D A I+ GN +VV RL DA F+ +DQ Sbjct: 290 FCLTDQAGKLMPHFIFISNINSKDS-AQIITGNEKVVRPRLSDAEFFFLQDQK------- 341 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL + L +F K+GT E+ RI L IA I A+ Sbjct: 342 -------------QPLFELSHHLKTR--IFQDKLGTLWEKSERIANLAVHIADQIGANTD 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSK DL + +V EFPELQG G Y L +E DAIEE P+ + +P Sbjct: 387 AAYRAGLLSKCDLASRLVGEFPELQGIAGTYYTRLNDEPDVVADAIEEQYLPKFSGDKLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I ++LAD+LDTL+ + I E PSGSKDP++LRRA++GI+RI++E ++ + LS + Sbjct: 447 ATHVGIALALADRLDTLVGIFGIGEIPSGSKDPFSLRRASIGILRILIEKRLHVSLSHLV 506 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F + R + ++ + D I+A+ + D + + Sbjct: 507 KQALMGYGDILENIDQTLTEVMEFINARYRAMYSEQGVLVDTIQAVQAVQTDVPMDFDER 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ + F + + KR+ ILA + +++PQ L+ AE+ LY I Sbjct: 567 IQAVTAFRLLPQAAILAENNKRVANILAKA----GTVQGDVTPQNLIEPAEQALYQAIES 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q +H Y I L S+ EP+ FFD V+VN DD ++ NRL+LL ++ + L Sbjct: 623 AKVSVQPLHNHGDYQGILTTLVSLSEPLTQFFDHVMVNADDETLKQNRLALLSQVRKLFL 682 Query: 694 IVINVQ 699 V ++ Sbjct: 683 SVADIG 688 >gi|257884091|ref|ZP_05663744.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257819929|gb|EEV47077.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 694 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 213/733 (29%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 121 TKYTHGKESKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G +++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDYEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 339 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|15595206|ref|NP_064728.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PAO1] gi|25009339|sp|Q9I7B8|SYGB_PSEAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|9945826|gb|AAG03398.1|AE004440_8 glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa PAO1] Length = 684 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 339/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 61 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVD------LQQIDKSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 115 IQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 335 -----------QPLESFNERL--RNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 382 SRAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 501 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 502 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 562 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 619 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|293378310|ref|ZP_06624479.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium PC4.1] gi|292643174|gb|EFF61315.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium PC4.1] Length = 691 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKESKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 384 DLQRAAKIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 504 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPKLFENDAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 621 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|330806669|ref|YP_004351131.1| glycine--tRNA ligase, beta subunit (glycyl-tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327374777|gb|AEA66127.1| Glycine--tRNA ligase, beta subunit (Glycyl-tRNA synthetase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 683 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 203/723 (28%), Positives = 339/723 (46%), Gaps = 67/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + A+ + L+ G+ Y+ + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKALNTLADAFLAGIDKGLQAAGLGYEAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P PK MRW+ ++RP + ++ +L Sbjct: 115 SQSIKGKPTASLLPTIVEDSLNDLPIPKRMRWAARKE-----EFVRPTQWLVMLL----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++ID + G + GHRFH P +++ S +Y+ DL A VL D RR I Sbjct: 165 GDQVIDCTILAQKAGRDSRGHRFHHPQSVRITSPANYLADLRAAYVLADANERRELISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + +LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 TEELATLQEGTAIVPANLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D I+ GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKDP-QQIIAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF K+G+ ++ R+ L IA I D Sbjct: 335 -----------QPLESFNERL--RNVVFQEKLGSVYDKAERVSKLAAFIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA+ E A+ E PRG +PT Sbjct: 382 ARAGILSKCDLSTEMVGEFPEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI+++ ++D+ L+ + Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKQLDLDLNDAVAF 501 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F DRL+ D + ++ + + L ++ Sbjct: 502 AVNAFGSKVKSAGLADAVLEFIFDRLRARYEDEGVEVATYLSVRALKPGSALDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + KR+ +L+ E + + +Y AE L + I Sbjct: 562 VQAFRKLPEAAALASVNKRVSNLLSKAEPSVK----AVEARYFDNAAEFSLNSAIQQAYA 617 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 +Q M+ + Y + L ++ EP++ FF+ V+VN D+ +VR NR +LL ++++ L + Sbjct: 618 SVQPLMEKRDYAEALARLAALREPVDAFFEAVMVNADNEDVRKNRYALLARLRSLFLNIA 677 Query: 697 NVQ 699 ++ Sbjct: 678 DIS 680 >gi|167628096|ref|YP_001678596.1| glycine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167598097|gb|ABZ88095.1| Glycine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 695 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 217/725 (29%), Positives = 365/725 (50%), Gaps = 60/725 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + AE L + LK+ V + + + +P RL +K L+ Sbjct: 6 KDFLFELGTEELPPKALRSLAESLLNSVETQLKDAKVGFGGAKWFASPRRLSFIMKDLAE 65 Query: 62 HSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V K GF S G++ +I+ KGD + Sbjct: 66 SQEDIVVEKQGPLVSIAYKDDEPTKVALGFASSCGVELDQLDRIET--PKGDKLFYKTIQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L +L+ I+ A++++P PK MRW S ++RP+ +L + +E I Sbjct: 124 SGQLTVSLLQEIITKALKQLPIPKMMRWGD-----SVVEFVRPVHWVLALYGSE-----I 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + + Y R L EA VL+D E R+ ++ A ++ Sbjct: 174 VDIEILGHKASNITYGHRFHHPDAISINEIAEYERVLAEAKVLVDWEQRKQMLIEQAQKI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +++ D DL+EE+ +VE+ + SF+K +L +P+E + +++ +QKCF Sbjct: 234 AKENNYKVILDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISSMEEHQKCFALLDC 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L + FI +SNI++ + GN +V+ ARL DA F+ D Sbjct: 294 DNNLVSNFITISNIESKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L K L+Q + RL+ +V F K+G ++ RI +K+A L + D RA Sbjct: 338 -----LKKSLEQLLPRLE--NVTFQNKLGNMYQKAQRIANTAQKLADLNNVDSQQAYRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL +++V EF +LQG IGK YA E DAIE+ P+ +P ++ Sbjct: 391 LLAKADLISDMVFEFTDLQGIIGKYYAKAHGETDIVADAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ + I +KP+G+KDP+ALRR+ +GI+RI+ + IDI L + IE Sbjct: 451 CVALAEKLDTLVGIFGIGQKPTGNKDPFALRRSAIGILRILRDTNIDIALEKVIEIALDS 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F DRLK D + ++ E+++ + D++ I + Sbjct: 511 YKEVNNLEFSSDIKAEVVSFCIDRLKNLYKDEGVAVNIFESVINTKYDSIKDFAARILAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-PQYLLLEAEKRLYAVISDFGT 636 F S+ K + + S KR+ IL+ ++++ S I + E E L I + Sbjct: 571 TSFISTDKAQSLIASNKRVANILSKNASEDKKYSYNIEIAKTARNEYELALAYSIEEISA 630 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + ++ Y+ +LL + + I FF+ V+V DD VRDNR++LL I + + V Sbjct: 631 DLDKYLGNREYNYALELLTCLDKVIAEFFENVMVMDDDASVRDNRIALLATIHKMFVGVA 690 Query: 697 NVQKI 701 ++ K+ Sbjct: 691 DISKL 695 >gi|257898049|ref|ZP_05677702.1| glycyl-tRNA synthetase [Enterococcus faecium Com15] gi|257835961|gb|EEV61035.1| glycyl-tRNA synthetase [Enterococcus faecium Com15] Length = 694 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 121 TKYTHGKEAKEVLTGLAGVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 339 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 507 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E++P+ +AEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVNPELFENDAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 624 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|107099002|ref|ZP_01362920.1| hypothetical protein PaerPA_01000008 [Pseudomonas aeruginosa PACS2] gi|218888754|ref|YP_002437618.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa LESB58] gi|226737058|sp|B7V0P3|SYGB_PSEA8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218768977|emb|CAW24735.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa LESB58] Length = 684 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 338/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 61 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVD------LQQIDKSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 115 SQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 335 -----------QPLESFNERL--RNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 382 SRAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 501 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 502 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 562 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 619 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|257893054|ref|ZP_05672707.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260559557|ref|ZP_05831737.1| glycyl-tRNA synthetase [Enterococcus faecium C68] gi|257829433|gb|EEV56040.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260074225|gb|EEW62547.1| glycyl-tRNA synthetase [Enterococcus faecium C68] Length = 694 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 213/733 (29%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 121 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 339 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEAMKKSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|227551965|ref|ZP_03982014.1| glycine--tRNA ligase [Enterococcus faecium TX1330] gi|227178870|gb|EEI59842.1| glycine--tRNA ligase [Enterococcus faecium TX1330] Length = 691 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKESKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 504 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPKLFENDAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 621 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|293568651|ref|ZP_06679966.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1071] gi|293571625|ref|ZP_06682646.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E980] gi|291588611|gb|EFF20444.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1071] gi|291608295|gb|EFF37596.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E980] Length = 691 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKESKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDVKTGRASRGHRFLGED-VTIAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKTAVATAIREHYMPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+I+A+L E +L Sbjct: 504 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIDAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ +AEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAQLEKQSEVDPELFENDAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + H+ Y Q L ++ IE +FDQ +V D+ VR NRL+ L I Sbjct: 621 AVEAMKASFADQTIHENYDQ----LVALRPLIENYFDQTMVMADEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|257882783|ref|ZP_05662436.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257818441|gb|EEV45769.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,502] Length = 694 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 121 TKYTHGKESKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G +++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDYEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V +H KIG+ E++ R++V+ + I + + ++ Sbjct: 339 ----------ASIDQYVEKLKT--VTYHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|293559431|ref|ZP_06675970.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1162] gi|314948954|ref|ZP_07852320.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0082] gi|291606645|gb|EFF36040.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1162] gi|313644613|gb|EFS09193.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0082] Length = 691 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 213/733 (29%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDVKTGRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRQEMIVTQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWVIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 QSTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISDVISKDTDRFGIGLSEGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEAMKKSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|116053728|ref|YP_788163.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa UCBPP-PA14] gi|254237749|ref|ZP_04931072.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa C3719] gi|254243121|ref|ZP_04936443.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 2192] gi|122262137|sp|Q02V73|SYGB_PSEAB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|115588949|gb|ABJ14964.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa UCBPP-PA14] gi|126169680|gb|EAZ55191.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa C3719] gi|126196499|gb|EAZ60562.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 2192] Length = 684 Score = 733 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 338/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 61 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVD------LQQIDKSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 115 SQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 335 -----------QPLESFNERL--RNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 382 ARAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 501 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 502 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 562 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 619 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|86147197|ref|ZP_01065513.1| glycyl-tRNA synthetase beta subunit [Vibrio sp. MED222] gi|85835081|gb|EAQ53223.1| glycyl-tRNA synthetase beta subunit [Vibrio sp. MED222] Length = 688 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 204/703 (29%), Positives = 335/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKNFLIELGTEELPPTALRSLAEAFASNFEAGLKTAELSHEGIKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAISVAFDAEGNATKAAQGWARGNGITVEQADRLKTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++++ I A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 QEVAGKPVQELVMDIAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTVLL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +++++ ++ + GHRF + S D Y LEE V+ D + R+ IL D Sbjct: 169 DELVEGEILGVASARTIRGHRFMGEQEFTIDSADQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AKKAADAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEQEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDADKNLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+A LD +F ++GT ++ RI L IA+ IDADV Sbjct: 339 -----------RPLIDRLAELDQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDTLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIGK 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++I F R + + D D+I+A+L +K Sbjct: 505 AKELLGDKLTNENVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E+ EI L +AE+ L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELPAEIDLALLQEDAERALAENVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|294618701|ref|ZP_06698234.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1679] gi|291595044|gb|EFF26388.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1679] Length = 691 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEIIPFEILDVKTDRASRGHRFLGED-VTFTHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|50086259|ref|YP_047769.1| glycyl-tRNA synthetase subunit beta [Acinetobacter sp. ADP1] gi|81827366|sp|Q6F7L8|SYGB_ACIAD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|49532235|emb|CAG69947.1| glycyl-tRNA synthetase, beta chain [Acinetobacter sp. ADP1] Length = 689 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 203/718 (28%), Positives = 354/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLAFASIEAYAAPRRLALKIVDVDGAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITADQVSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + ++II+ Sbjct: 125 QTLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQIIE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHQAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F++++L +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRANFEERFLAVPQEALITTMQDNQKYFCLINSEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSPITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTLADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 ALPEAAALAAANKRVANILAKEAAPEGS----VVEANLVEDAEKALFAELQAVTPAVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++++ +V +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRHLFTVVADVS 685 >gi|262280266|ref|ZP_06058050.1| glycyl-tRNA synthetase subunit beta [Acinetobacter calcoaceticus RUH2202] gi|262258044|gb|EEY76778.1| glycyl-tRNA synthetase subunit beta [Acinetobacter calcoaceticus RUH2202] Length = 689 Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 204/718 (28%), Positives = 353/718 (49%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKNLRDALQAETVKGLKDAGLNFASIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K +L + ++I+D Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVLLLK-----DDQIVD 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F++++L +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRANFEERFLAVPQEALITTMQDNQKYFCLINSEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPIQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ +RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWDKSTRIAKLAVALSAITGANPADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA ++ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARIEGENTEVSEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNLALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+++A+ + L + +N F Sbjct: 512 DIVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVLQAVQALAPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A + ++ Sbjct: 572 ALPEAAALAAANKRVANILAKEAAPEGS----VVEANLVEDAEKALFAELQAVTPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + K Y L ++ PI+ FFD V+V DD +++ NRL LL ++N+ + +V Sbjct: 628 LAAKDYTAALSKLAALRAPIDAFFDGVMVMADDADLKANRLRLLAQLRNLFTAIADVS 685 >gi|296386480|ref|ZP_06875979.1| glycyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PAb1] Length = 684 Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 206/723 (28%), Positives = 338/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 1 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLGYAAARFYAAPRRLAVLVEQ 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ +++ K G Sbjct: 61 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVD------LQQIDKSGPKLRF 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 115 SQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDANGKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 335 -----------QPLESFNERL--RNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 382 ARAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 442 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 501 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 502 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 561 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 562 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 619 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 678 Query: 697 NVQ 699 ++ Sbjct: 679 DIS 681 >gi|126737300|ref|ZP_01753035.1| glycyl-tRNA synthetase subunit beta [Roseobacter sp. SK209-2-6] gi|126721885|gb|EBA18588.1| glycyl-tRNA synthetase subunit beta [Roseobacter sp. SK209-2-6] Length = 747 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 271/771 (35%), Positives = 399/771 (51%), Gaps = 96/771 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y + TP RL L L+GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRVTDGLVEAGLTYAGAAAFSTPRRLTLALEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KAI+GFLR GL + +D KG VY A + KP R Sbjct: 61 AESPTVREERKGPKVGAPDKAIEGFLRGAGLTRDQLEE--RDTPKGAVYFAAIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ ++ PW KSMRW T + W+RPL SILC+L +++A ++DLD+ Sbjct: 119 AAIIAEVLEDTVRNFPWSKSMRWGTG-----SLRWVRPLHSILCVL-SDEAGATVVDLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T+GHRF AP I V + Y L+ A V+LD R+ AI +A A A G Sbjct: 173 DGIKSGNTTHGHRFMAPDEIIVTGFEDYAAKLKRAHVVLDTAERQQAIWQEATNQAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V +G D ++L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLLGDIDAEFLELPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW D + + + A K Sbjct: 293 EGFVTVANRETADQGATILAGNQKVLSARLADAKFFWANDLRVAKSETGMAAWAEK---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 349 -------------LSNVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 395 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 396 DLSSEMVYEFPELQGLMGRYYAEAAGLPQEVANACEMHYSPLGPSDDVPTEPVSVAVALA 455 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL------ 534 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++LEN + + L +++Q Sbjct: 456 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLENDVRMSLFAVLKEQANEVAEGV 515 Query: 535 ------------------ILFFHDR----LKLYLHDRD---------------------- 550 F + + YL+++D Sbjct: 516 AGVENQLFIQSGQAEELEAEFIKNMGVEDILAYLNEKDELEEGDRKEFEQGISFLERISD 575 Query: 551 ---IRHDLIEAILRPENDNLLTIVDLIKH----------LNEFFSSAKG------EKFLL 591 HD ++ LR + ++D + + E L Sbjct: 576 LLTFFHDRLKVFLRDQGIR-HDVIDACIAMEGNDDLTLLVKRARALEDFLKSEDGENLLQ 634 Query: 592 SAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR IL+ E+K+ E S ++ ++EK L+A ++ I +++ + + Sbjct: 635 GFKRANNILSQAEEKDGVEYSYGADVKFAEDDSEKALFAALAASEGAISTAIEAEDFAAA 694 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ P++ FF+ V VN D+ VR NRL+LL I+ + V ++ +I Sbjct: 695 MGGTAALRAPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVCGQVADLSRI 745 >gi|294616321|ref|ZP_06696114.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1636] gi|291590835|gb|EFF22551.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1636] Length = 691 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR+NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRENRLTQLNQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|294623001|ref|ZP_06701890.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium U0317] gi|291597557|gb|EFF28719.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium U0317] Length = 691 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEIIPFEILDVKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|69247288|ref|ZP_00604289.1| Glycyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] gi|258616600|ref|ZP_05714370.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] gi|68194910|gb|EAN09380.1| Glycyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] Length = 691 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPYFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR+NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRENRLTQLNQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|118497331|ref|YP_898381.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. novicida U112] gi|195536017|ref|ZP_03079024.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. novicida FTE] gi|118423237|gb|ABK89627.1| glycyl-tRNA synthetase beta subunit [Francisella novicida U112] gi|194372494|gb|EDX27205.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. novicida FTE] Length = 694 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 368/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +++++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VNIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELAKAAANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|261250632|ref|ZP_05943207.1| glycyl-tRNA synthetase beta chain [Vibrio orientalis CIP 102891] gi|260939201|gb|EEX95188.1| glycyl-tRNA synthetase beta chain [Vibrio orientalis CIP 102891] Length = 688 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 203/703 (28%), Positives = 331/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + +Q ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEVELKGADLAHQGVKWYAAPRRLALKVSAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDADGIATKAAQGWARGNGITVEQADRLKTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIVVELAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGTADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDDNNKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAK 504 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVETDVIEFMLGRFNAWYKDEGFSVDIIQAVLANRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLAGLREPVDAFFDNVMVMADDEALKK 664 >gi|208779118|ref|ZP_03246464.1| glycyl-tRNA synthetase, beta subunit [Francisella novicida FTG] gi|208744918|gb|EDZ91216.1| glycyl-tRNA synthetase, beta subunit [Francisella novicida FTG] Length = 694 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 367/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +++++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VNIEILGHKAANITYGHRFHHPQSIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLENIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELAKAAANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|52842066|ref|YP_095865.1| glycyl tRNA synthetase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629177|gb|AAU27918.1| glycyl tRNA synthetase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 688 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 197/722 (27%), Positives = 357/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S + + +I+ D KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCSVTVDALTKIQTD--KGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y ++ A V+ D RR AI++ L Sbjct: 177 L-----GVTSGCHSRGHRFHHPQEIRINSAASYEDQMKNAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G ++ ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + Sbjct: 232 AAPLGASVIMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNM 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI +S+ +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNIASSNP-KQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 338 -------QPLSAHIP--STEQVIFQVKLGSMYDKVQRIKAMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +N+P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAIVATALNEQYMPRFSGDNLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRMDTLVGIFAIGQKPTGVKDPFKLRRHALSVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+ LQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLAHLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|261208621|ref|ZP_05923058.1| glycyl-tRNA synthetase [Enterococcus faecium TC 6] gi|260077123|gb|EEW64843.1| glycyl-tRNA synthetase [Enterococcus faecium TC 6] Length = 694 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 121 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPYFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 339 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 ETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEVMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|257879933|ref|ZP_05659586.1| glycyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257814161|gb|EEV42919.1| glycyl-tRNA synthetase [Enterococcus faecium 1,230,933] Length = 694 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 121 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKDHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 339 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 447 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEVMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|328676816|gb|AEB27686.1| Glycyl-tRNA synthetase beta chain [Francisella cf. novicida Fx1] Length = 694 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 367/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELEKVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVKSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLENIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELAKAAANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|218708120|ref|YP_002415741.1| glycyl-tRNA synthetase subunit beta [Vibrio splendidus LGP32] gi|254781871|sp|B7VGK6|SYGB_VIBSL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218321139|emb|CAV17089.1| Glycyl-tRNA synthetase beta chain [Vibrio splendidus LGP32] Length = 688 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 205/703 (29%), Positives = 333/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKNFLIELGTEELPPTALRSLAEAFASNFEAGLKTAELSHEGIKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAISVAFDAEGNATKAAQGWARGNGITVEQADRLKTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++++ I A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 QEVAGKPVQELVMDIAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTVLL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +++++ + + GHRF + S D Y LEE V+ D + R+ IL D Sbjct: 169 DELVEGKILGVASARTIRGHRFMGEQEFTIDSADQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A AVG + DL+EE+ LVEW V F++ +L +P E + T+K +QK F Sbjct: 229 AKKAADAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEQVFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDADKNLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+A LD +F ++GT ++ RI L IA+ IDADV Sbjct: 339 -----------RPLIDRLAELDQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDTLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIGK 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++I F R + + D D+I+A+L +K Sbjct: 505 AKELLGDKLTNENVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELPAEIDLALLQEDAEKALAENVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|313111470|ref|ZP_07797271.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 39016] gi|310883773|gb|EFQ42367.1| glycyl-tRNA synthetase beta chain [Pseudomonas aeruginosa 39016] Length = 685 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 205/723 (28%), Positives = 336/723 (46%), Gaps = 66/723 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + + E + LK G+ Y R Y P RL + ++ Sbjct: 2 MSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQ 61 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP + G +A GF + G+ ++ K G Sbjct: 62 LAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGVD------LQHIDKSGPKLRF 115 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L IV ++ ++P PK MRW+ ++RP + ++ + Sbjct: 116 SQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARRE-----EFVRPTQWLVMLF----- 165 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + +++ ++ G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 166 GDDVVECEILAQKAGRESRGHRFHNPDNVRISSPAAYLEDLRGAHVLADFAERRELIAKR 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ LVEW + SF++++L +P+E + T++ NQK F Sbjct: 226 VAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI V+N+++ IV GN +VV RL DA F+K+D+ Sbjct: 286 LLDANNKLLPRFITVANVESK-APENIVSGNEKVVRPRLTDAEFFFKQDKK--------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL+ RL +VVF A++GT E+ R+ L IA+ I + Sbjct: 336 -----------QPLESFNERL--RNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNA 382 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL TE+V EFPE+QG G YA E A+ E PRG +P+ Sbjct: 383 ARAGILSKCDLATEMVGEFPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPST 442 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 V++ADKLDTL+ + I P+GSKDPYALRRA LG++RI++E ++D+ L + Sbjct: 443 LTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAVNA 502 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ F DRL+ D + + +++ + + L ++ Sbjct: 503 AVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQA 562 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + E + KR+ ILA K E+ + L+ AEK L + +++ + Sbjct: 563 VQAFRQLPEAEALAAANKRVSNILA---KSEDEVPPNVDASLLVEAAEKALGSAVANAES 619 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + Y L ++ EP++ FF V+VNVDD VR NR +LL ++ L V Sbjct: 620 EVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVA 679 Query: 697 NVQ 699 ++ Sbjct: 680 DIS 682 >gi|257890448|ref|ZP_05670101.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257826808|gb|EEV53434.1| glycyl-tRNA synthetase [Enterococcus faecium 1,231,410] Length = 694 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 213/733 (29%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 4 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 64 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 120 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 121 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 171 DEIIPFEILDVKTDRASRGHRFLGED-VTFTHAKEYEEKLNEQFVIASPQKRKEMIITQA 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 230 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 290 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 339 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 387 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++R+I K PLS Sbjct: 447 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRVIESKKWAFPLSVLQ 506 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 507 ETISEVISKDTDRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 567 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 624 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 680 AMALSLASLDQII 692 >gi|239993757|ref|ZP_04714281.1| glycyl-tRNA synthetase subunit beta [Alteromonas macleodii ATCC 27126] Length = 692 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 198/701 (28%), Positives = 345/701 (49%), Gaps = 58/701 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + E + L + + + ++ + P RL +Y+ GL+ Sbjct: 5 NCLVELGTEELPPKALKSLGEAFATQFEAALTQADLSFDSVSWFAAPRRLAVYVSGLAEG 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 65 QADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGIDVADAERLVTD--KGEWLLHKAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + ++L+ ++ A+ K+P PK MRW ++ +IRP+ ++ + +E + Sbjct: 123 PGQSVAELLEGLINQAVSKLPIPKPMRWGNYNT-----QFIRPVHTLCVLYGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +++ + + G + GHRFH ++ D+Y LE+ VL D E R++ + Sbjct: 173 VNVSVLGLTSGRVVQGHRFHGEGRFELDHADNYASALEQQYVLADFEARKDKVRQQLEDA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++ L+ ++DLLEEI LVEW V FD+ +L +P+E + T+K +QK Sbjct: 233 AQSLSLKPDYNEDLLEEIASLVEWPVVLQAGFDEAFLAVPKEALIYTMKDDQKYVPLLDS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L+N F+ V+NI++ D + ++ GN +V+ RL DA F+ D+ Sbjct: 293 DGALSNTFLFVTNIESRDA-SQVISGNEKVIRPRLADAEFFFNSDKK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L+ V+F ++GT E+ RI L IA IDA+ RA Sbjct: 339 -------TTLESRLESLET--VLFQKQLGTLKEKSERISALSAFIASQIDANETQAARAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL + +V EFP++QG +GK YA+ E+ +A+ E PR + +P++ +S Sbjct: 390 LLAKTDLMSNMVMEFPDVQGVMGKYYALNDGEDAPVAEALYEQYMPRFAGDALPSSGVSA 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------- 528 +V+LADKLDTL+ + I + P G KDP+ALRRA +G++RI+ E + + L Sbjct: 450 SVALADKLDTLVGIFGIGQLPKGDKDPFALRRAAIGVLRIVTELSLPLDLETLVSKAIDV 509 Query: 529 --------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R L D+ I D+I+A+ + + +++F Sbjct: 510 YGDKLTNAETQAQVVDFVLGRFTALLQDQAIAIDVIQAVAARRPTKPADYLARVHAVDKF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KR+ ILA + + + S+ I L EAEK LY + + Sbjct: 570 RALEEAEALAAANKRVANILAKQNVEVTD-SVNIDESLLAEEAEKALYVELKAAQKEVDI 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 ++ + Y +I L ++ I+ FFD V+V DD V++NR Sbjct: 629 AVPSQDYTRILTALATLRNVIDNFFDNVMVMADDEAVKNNR 669 >gi|289566740|ref|ZP_06447154.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecium D344SRF] gi|289161461|gb|EFD09347.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecium D344SRF] Length = 691 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 214/733 (29%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEVIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPYFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVGLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSILAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEVMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|241668636|ref|ZP_04756214.1| glycine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877169|ref|ZP_05249879.1| glycyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843190|gb|EET21604.1| glycyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 695 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 216/725 (29%), Positives = 362/725 (49%), Gaps = 60/725 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + AE L + LK+ V + + + +P RL +K L+ Sbjct: 6 KDFLFELGTEELPPKALRGLAESLLNSVETQLKDAKVGFGGTKWFASPRRLSFIIKDLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G K GF S G++ +I+ KGD + Sbjct: 66 SQEDIVVEKQGPLVSIAYKDGEPTKVALGFASSCGVELDQLDRIET--PKGDKLFYKTIQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L +L+ I+ A++++P PK MRW S ++RP+ +L + +I Sbjct: 124 SGQLTVSLLQEIITKALKQLPIPKMMRWGD-----SVVEFVRPVHWVLALY-----GNEI 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + + Y R L EA VL+D E R+ ++ A ++ Sbjct: 174 VDIEILGHKASNITYGHRFHHPDAISINEIAEYERLLAEAKVLIDWEQRKQMLIEQAKKI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+ +L +P+E + +++ +QKCF Sbjct: 234 AKENNYKVVLDDDLVEEVCAIVEYPNAMLCSFNNDFLRVPQEALISSMEEHQKCFALLDC 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L FI +SNI++ + GN +V+ ARL DA F+ D Sbjct: 294 DNNLVANFITISNIESKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L K L+Q + RL+ +V F K+G ++ RI +K+A L + D RA Sbjct: 338 -----LKKSLEQLLPRLE--NVTFQNKLGNMYQKAQRIANTAQKLADLNNVDSQQAYRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL +++V EF +LQG IGK YA E DAIE+ P+ +P ++ Sbjct: 391 LLAKADLISDMVFEFTDLQGIIGKYYAKAHGETDIVADAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ + I +KP+G+KDP+ALRR+ +GI+RI+ + IDI L + IE Sbjct: 451 CVALAEKLDTLVGIFGIGQKPTGNKDPFALRRSAIGILRILRDTNIDIALEKVIEIALDS 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F DRLK D + ++ E+++ + D++ I + Sbjct: 511 YKEVNNLEFSSDIKAEVVSFCLDRLKNLYKDEGVAVNIFESVINTKYDSIKDFAARIIAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS-PQYLLLEAEKRLYAVISDFGT 636 F S+ K + + S KR+ IL ++++ S I + E E L I + Sbjct: 571 TSFISTDKAQSLIASNKRVANILIKNASEDKKYSYNIEIAKTAGNEYELALAYSIEEISA 630 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + ++ Y+ +LL + + I FF+ V+V DD VRDNR++LL I + + V Sbjct: 631 DLDKYLGNREYNYALELLTCLDKVIAEFFENVMVMDDDASVRDNRIALLATIHKMFVGVA 690 Query: 697 NVQKI 701 ++ K+ Sbjct: 691 DISKL 695 >gi|314939537|ref|ZP_07846765.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a04] gi|314942708|ref|ZP_07849534.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133C] gi|314953301|ref|ZP_07856229.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133A] gi|314993381|ref|ZP_07858746.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133B] gi|314995731|ref|ZP_07860820.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a01] gi|313590003|gb|EFR68848.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a01] gi|313592046|gb|EFR70891.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133B] gi|313594644|gb|EFR73489.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133A] gi|313598573|gb|EFR77418.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133C] gi|313641173|gb|EFS05753.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a04] Length = 691 Score = 731 bits (1888), Expect = 0.0, Method: Composition-based stats. Identities = 216/733 (29%), Positives = 348/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L E + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDENQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ +I + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEIIPFEILDIKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVVRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + + ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVRLSEEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMVGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK LY Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELYK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEGMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLNQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|120596839|ref|YP_961413.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. W3-18-1] gi|166227929|sp|A1RDW4|SYGB_SHESW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120556932|gb|ABM22859.1| Glycine--tRNA ligase [Shewanella sp. W3-18-1] Length = 689 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 213/720 (29%), Positives = 340/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 293 DAGKLLPNFIFVANIESKDP-AQIISGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 341 ---------TLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTHLSNVNASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I L AE+ L A +++ + Sbjct: 570 FRSLEASGALAAANKRVSNILA---KVEGALPTTIDASLLTEAAEQALAAKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 >gi|146291117|ref|YP_001181541.1| glycyl-tRNA synthetase subunit beta [Shewanella putrefaciens CN-32] gi|166227927|sp|A4Y1A9|SYGB_SHEPC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145562807|gb|ABP73742.1| Glycine--tRNA ligase [Shewanella putrefaciens CN-32] Length = 689 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 212/720 (29%), Positives = 340/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 293 NAGKLLPNFIFVANIESKDP-AQIISGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 341 ---------TLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTHLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I L AE+ L A +++ + Sbjct: 570 FRSLEASGALAAANKRVSNILA---KVEGALPTTIDASLLTEAAEQALAAKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 >gi|319424423|gb|ADV52497.1| glycyl-tRNA synthetase, beta subunit [Shewanella putrefaciens 200] Length = 689 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 212/720 (29%), Positives = 340/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATILLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 293 DAGKLLPNFIFVANIESKDP-AQIISGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 341 ---------TLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTHLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I L AE+ L A +++ + Sbjct: 570 FRSLEASGALAAANKRVSNILA---KVEGALPTTIDASLLTEAAEQALAAKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 >gi|310659074|ref|YP_003936795.1| glycine tRNA synthetase subunit beta [Clostridium sticklandii DSM 519] gi|308825852|emb|CBH21890.1| glycine tRNA synthetase, beta subunit [Clostridium sticklandii] Length = 687 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 226/722 (31%), Positives = 367/722 (50%), Gaps = 64/722 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI +EEIPAR K D+ L LKE + Y+++ TP R + + L+ + Sbjct: 5 LLFEIGTEEIPARFIAKTKADMKGYLEKTLKELHIEYKSIELKCTPRRFVVVIDELAENQ 64 Query: 64 PEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 EE GP KA+ GFL+ + + K K ++ L K Sbjct: 65 ATVEEELKGPAKKIAFDENNNPSKALLGFLKGKDISP-EEVYFKTVGKDEYAHI-KLTKE 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++ +LK I I+ +PKSMRW + ++RP++ +C++ E++I Sbjct: 123 GQAVKGLLKDIFEGMIKSTTFPKSMRWGGKN-----IRFVRPIRYFVCLM-----DEEVI 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I GNIT GHRF I + + D Y L+E V+LD E R++ IL +A Sbjct: 173 DFEIEGIKTGNITKGHRFLGSSEIVINTPDEYEAKLKENFVILDDEQRKSLILEQCKAVA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++G L+ D+DLLEE+ +VE+ F G FD+ YL LP+E I +K +Q+ F + Sbjct: 233 DSLGGTLMMDEDLLEEVNYIVEYPTAFYGEFDESYLSLPKEAIITPMKEHQRYFPVLDAD 292 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N FI V N + + +GN +V+ ARL DAL F+ D Sbjct: 293 GKLLNKFITVRNGDSY-AIDNVKRGNEKVLDARLSDALFFYHEDTK-------------- 337 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 KPL+ + RLD +VF K+GT ++ RI+ L +KIA+ + + +DRA Sbjct: 338 ------KPLEAYVERLDT--IVFQQKLGTILDKTKRIQNLSEKIAKALALTLPNLDRAAY 389 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSKADL T +V EF ELQG +G+ YA L NE +AI EH PR + +P+ I Sbjct: 390 LSKADLTTAMVFEFTELQGIMGRYYANLSNEPSEVAEAIYEHYLPRFAGDELPSTNEGII 449 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---- 532 ++L+D+LD++ F+AI +P+GS+DPYALRR LGI+ I++E K+D+ L ++ Sbjct: 450 LALSDRLDSVAGFFAIGIQPTGSQDPYALRRQALGILNIMMEKKLDVRLFDLLDLALENF 509 Query: 533 ------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +L+ FF RLK D IR+D+++AI+ E+ N ++ K L+ + Sbjct: 510 DFEDMDKQSVKSDLMSFFELRLKNLFTDMGIRYDVVDAIINIEDSNPFDLLIRAKDLDAW 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + L + RI I ++ ++ ++E +L + ++ Sbjct: 570 VKNNSVTEALQTFSRISNISKEA------VAGKVDEALFAHDSEAKLNTAYNSIKAEVEA 623 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + Y + +LL SI + ++ FFD V++ ++ ++R NRL++L I+ + V ++ K Sbjct: 624 MLARREYVKALELLISIKDSVDAFFDSVMIMDENMDIRANRLAMLSNIRTTMESVADLSK 683 Query: 701 IV 702 IV Sbjct: 684 IV 685 >gi|226311657|ref|YP_002771551.1| glycyl-tRNA synthetase beta chain [Brevibacillus brevis NBRC 100599] gi|226094605|dbj|BAH43047.1| glycyl-tRNA synthetase beta chain [Brevibacillus brevis NBRC 100599] Length = 689 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 195/733 (26%), Positives = 341/733 (46%), Gaps = 77/733 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D L+E+ EE+PAR +AA + L E V + + TP R L + G Sbjct: 1 MSKRDLLVEVGLEEMPARFVAQAAAQFKEKVEKWLTAERVPFDQITALETPRRFALLING 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ +E GP G KA GF RS ++ D K+ + A Sbjct: 61 LAEKQPDRNDEAKGPARKIAQDEAGNWSKAALGFARSNNVEP--DQLYYKEVNGIEYVHA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++L + I + +PK+MRW ++RP++ ++ + Sbjct: 119 RKSEAGKPTTELLPQ-LAEVITGMSFPKNMRWGARE-----LKYVRPIRWLVALF----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++IDL++ + G ++ GHRF + + Y+ L E V++ P+ RR I+ Sbjct: 168 GDELIDLEIAGVKSGRVSRGHRFLGTE-VTLNHPSEYVSKLAEQYVMVKPDERRATIVEQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 HRL G + D+ LL+E++ LVE+ G+F++++L +P E++ +++ +Q+ F Sbjct: 227 IHRLEKENGWTIPMDEGLLDEVVHLVEYPTALYGTFEQEFLSIPREVLVTSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L N F+ V N + + +GN +V+ ARL DA F+ DQ Sbjct: 287 VENAQGQLLNHFVTVRNGDSR-ALENVAKGNEKVLRARLSDARFFYVEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 ++ + RL+ +V+H ++GT G++V R+R +IA + + Sbjct: 338 ------------SIESCLKRLET--IVYHEELGTIGDKVRRVRKTAAQIASKLGVSAEET 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 VDR ++K DL T +V EFPELQG +G++YA E+ + EH PR + + Sbjct: 384 KQVDRIAEIAKFDLVTNMVGEFPELQGIMGEDYARKAGESDVVASGVFEHYLPRFAGDKM 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + VSLADK+DT++ ++I P+GS+DPY LRR GI+ I++E I L+ Sbjct: 444 PASAQGAIVSLADKMDTIVGCFSIGIVPTGSQDPYGLRRMAAGIVTILVERDWQISLADL 503 Query: 529 IEDQ-------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + +L+ FF RLK L D +R+D+I+A+L + + Sbjct: 504 WDAAMEGYVAQGVNKRAAEDVKKDLVDFFALRLKNVLQDHGVRYDVIDAVLAADLTLVPE 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++ K L + + + + R+ + E ++S + E+ LY Sbjct: 564 VLAKAKALMGAVQTEEFKLIVEQFNRVNNLAQKAEAD------QVSEALFAEDVERALYQ 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ K ++ L ++ +PI FFD+V+V +D+ VR NRL LL + Sbjct: 618 AFQAVQKDVEGL---KDQEKVLATLSTLRQPINAFFDKVMVMAEDQAVRANRLGLLLQLS 674 Query: 690 NIILIVINVQKIV 702 ++ + KIV Sbjct: 675 RVLYRYADFSKIV 687 >gi|254374154|ref|ZP_04989636.1| glycyl-tRNA synthetase beta subunit [Francisella novicida GA99-3548] gi|151571874|gb|EDN37528.1| glycyl-tRNA synthetase beta subunit [Francisella novicida GA99-3548] Length = 694 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 208/724 (28%), Positives = 368/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELEKVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P PK MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPIPKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQRLAELGNFDSQQAYRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELAKATANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + V + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVSLHKMFIGVAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|332139416|ref|YP_004425154.1| glycyl-tRNA synthetase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] gi|238693287|sp|B4S277|SYGB_ALTMD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|327549438|gb|AEA96156.1| glycyl-tRNA synthetase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] Length = 692 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 197/701 (28%), Positives = 342/701 (48%), Gaps = 58/701 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + E + L + + + ++ + P RL +Y+ GL+ Sbjct: 5 NCLVELGTEELPPKALKSLGEAFATQFEAALSQADLSFDSVSWFAAPRRLAVYVSGLAEG 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 65 QADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGIDVADAERLVTD--KGEWLLHKAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + + ++L+ ++ A+ K+P PK MRW ++ +IRP+ ++ + +E + Sbjct: 123 PGQSVAELLEGLINQAVSKLPIPKPMRWGNYNT-----QFIRPVHTLCVLYGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +++ + + G + GHRFH ++ D+Y LE+ VL D E R++ + Sbjct: 173 VNVSVLGLTSGRVVQGHRFHGEGRFELDHADNYASALEQQYVLADFEARKDKVRQQLEDA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + L+ D++LLEEI LVEW V FDK +L +P+E + T+K +QK Sbjct: 233 AKNLSLKPDYDEELLEEIASLVEWPVVLQAGFDKGFLEVPKEALIYTMKDDQKYVPLLDS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L+N F+ V+NI++ D + ++ GN +V+ RL DA F+ D+ Sbjct: 293 DGALSNTFLFVTNIESHDA-SQVISGNEKVIRPRLADAEFFFNSDKK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L+ V+F ++GT E+ RI L IA IDA+ RA Sbjct: 339 -------TTLESRLESLET--VLFQKQLGTLKEKSERISALSAFIASQIDANETQAARAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL + +V EFP++QG +GK YA+ E+ +A+ E PR + +P++ +S Sbjct: 390 LLAKTDLMSNMVMEFPDVQGVMGKYYALNDGEDAPVAEALYEQYMPRFAGDALPSSGVSA 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------- 528 +V+LADKLDTL+ + I + P G KDP+ALRRA +G++RI+ E + + L Sbjct: 450 SVALADKLDTLVGIFGIGQLPKGDKDPFALRRAAIGVLRIVTELSLPLDLETLVSKAIDV 509 Query: 529 --------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R L D+ I D+I+A+ + + +++F Sbjct: 510 YGNKLTNAETQTQVVDFVLGRFNALLQDQAIAIDVIQAVAARRPTKPSDYLARVHAVDKF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KR+ ILA + ++ I L +AEK LY + ++ Sbjct: 570 KALEEAEALAAANKRVANILAKQN-VEVTATVNIDESLLAEDAEKALYVELKAAQKEVEI 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 ++ + Y +I L ++ I+ FFD V+V DD V+ NR Sbjct: 629 AVPSQDYTRILTTLATLRNVIDNFFDNVMVMADDEAVKHNR 669 >gi|145301092|ref|YP_001143933.1| glycyl-tRNA synthetase subunit beta [Aeromonas salmonicida subsp. salmonicida A449] gi|166227910|sp|A4STG3|SYGB_AERS4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|142853864|gb|ABO92185.1| glycine-tRNA synthetase, beta subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 689 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 211/721 (29%), Positives = 337/721 (46%), Gaps = 61/721 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI + E+P + AE + L + + + ++ + +P RL L + L+ Sbjct: 4 HTFLVEIGTAELPPKALRSLAEAFADNFKAELTKADLAFGDIEWFASPRRLALKVHALAS 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P K E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 64 EQPSKSVEKRGPAVSQAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHTAK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +D+L +V A+ K+P PK MRW ++RP+ ++ +L E Sbjct: 122 VEGRPAKDLLGELVASALAKLPIPKMMRWGDK-----TIQFVRPVFTVTLLLDGE----- 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAH 233 ++ + I GHRF + + Y + LE+ V+ D R+ I DA Sbjct: 172 LVPAHILGIDSARTIRGHRFMGEPEFTIDNASQYPQILLEKGKVVADFMARKAKIKADAE 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A+A G D LLEE+ LVEW V +F++K+L +P E + T+K +QK F Sbjct: 232 AAAAAFGGVADLDDALLEEVTALVEWPVVLTANFEEKFLAVPAEALVHTMKGDQKYFPVY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V+NI++ D + I+ GN +VV RL DA F+K D Sbjct: 292 DKNGKLLPKFIFVTNIESKDP-SQIISGNEKVVRPRLSDAEFFFKTD------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L + L R+ RL+ V+F ++GT +V RI + IA+ I A+VA R Sbjct: 338 -------LKQTLASRLPRLET--VLFQQQLGTVKAKVERIETVAGFIAERIGANVAQAKR 388 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK DL T +V EF QG +G YA E+ A+ E PR + +P+ Sbjct: 389 AGLLSKCDLMTNMVGEFASTQGVMGMHYARHDGEDEVVAVALNEQYMPRFAGDALPSALE 448 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 + V+LADKLDTL + I P G KDP+ALRRA +G +RI+ E ++D+ L + +E+ Sbjct: 449 ACAVALADKLDTLAGIFGIGMLPKGDKDPFALRRAAIGALRIMTEKQLDLDLVELVEEAV 508 Query: 533 --------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 +++ F R + D I D++ A+L L +K ++ Sbjct: 509 RVYGDKLTNKTVVTDVVDFMLGRFRAAYQDEGIGADVVLAVLARRPTRPLDFDRRVKAVS 568 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F S + KR+ ILA K E+ + P+ L AEK L +++ + Sbjct: 569 HFRSLDAALALAAANKRVSNILA---KVEGELPTAVKPELLQDAAEKALATQVAELQAEL 625 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y L ++ EP++ FF++V+V DD ++ NRL+LL ++N+ L V ++ Sbjct: 626 APLFAAGDYQAALTRLAALREPVDTFFNEVMVMADDEALKANRLALLNNLRNLFLQVADI 685 Query: 699 Q 699 Sbjct: 686 S 686 >gi|291484971|dbj|BAI86046.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. natto BEST195] Length = 679 Score = 730 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 206/721 (28%), Positives = 352/721 (48%), Gaps = 63/721 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++KG Sbjct: 1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G + D IK+ KG Y+ Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGAN-VEDLYIKE--VKGIEYVF 117 Query: 112 VLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + + + + +L + I + +PK+MRW +IRP+K I+ + + Sbjct: 118 VQKFQAGQETKSLLPE-LSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + + G T GHRF H + ++S Y L+E V+ DP R+ I + Sbjct: 171 ----VIPFSITNVESGRTTQGHRFLG-HEVSIESPSAYEEQLKEQHVIADPSVRKQMIQS 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 226 QLEAMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + G L FI V N + + +GN +V+ ARL DA F+K DQ Sbjct: 286 PVKDKNGDLLPHFITVRNGNS-HAIENVARGNEKVLRARLSDASFFYKEDQKLN------ 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--- 407 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 339 --------------IDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDT 382 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 383 LKHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGE 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P+ V++ADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I + Sbjct: 443 TPSTFTGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEE 502 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 503 LLTFVQTDKEIELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKL 562 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 563 GAPGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKQNLQEN 616 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ + Sbjct: 617 FSKKDYEAALASLAALKEPIDAYFDHTMVIADNESLKANRLAQMVSLADEIKSFANMNAL 676 Query: 702 V 702 + Sbjct: 677 I 677 >gi|321312008|ref|YP_004204295.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis BSn5] gi|320018282|gb|ADV93268.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis BSn5] Length = 679 Score = 730 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 205/721 (28%), Positives = 351/721 (48%), Gaps = 63/721 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++K Sbjct: 1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G + D IK+ KG Y+ Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGAN-VEDLYIKE--VKGIEYVF 117 Query: 112 VLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + + + + +L + I + +PK+MRW +IRP+K I+ + + Sbjct: 118 VQKFQAGQETKSLLPE-LSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + + G T GHRF H + ++S Y L+E V+ DP R+ I + Sbjct: 171 ----VIPFSITNVESGRTTQGHRFLG-HEVSIESPSAYEEQLKEQHVIADPSVRKQMIQS 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 226 QLETMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + G L FI V N + + +GN +V+ ARL DA F+K DQ Sbjct: 286 PVKDKNGDLLPHFITVRNGNS-HAIENVARGNEKVLRARLSDASFFYKEDQKLN------ 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--- 407 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 339 --------------IDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDT 382 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 383 LKHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGE 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P+ V++ADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I + Sbjct: 443 TPSTFTGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEE 502 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 503 LLTFVQTDKEIELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKL 562 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 563 GAPGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKQNLQEN 616 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ + Sbjct: 617 FSKKDYEAALASLAALKEPIDAYFDHTMVIADNEALKANRLAQMVSLADEIKSFANMNAL 676 Query: 702 V 702 + Sbjct: 677 I 677 >gi|296333317|ref|ZP_06875770.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675178|ref|YP_003866850.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] gi|296149515|gb|EFG90411.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413422|gb|ADM38541.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] Length = 679 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 203/721 (28%), Positives = 350/721 (48%), Gaps = 63/721 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR + + L L G LKE+ + + ++ + TP RL +++K Sbjct: 1 MSKQDLLLEIGLEEMPARFLNDSMVQLGEKLTGWLKEKNITHGEVKLFNTPRRLAVFVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G + D IK+ KG Y+ Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGAD-VKDLYIKE--VKGTEYVF 117 Query: 112 VLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + + + + +L + + + +PK+MRW +IRP+K I+ + + Sbjct: 118 VQKFQAGQETKSLLPE-LSGLVTSLHFPKNMRWGNED-----LRYIRPIKWIVALYGQD- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + + G T GHRF H + ++ Y L+E V+ DP R+ I + Sbjct: 171 ----VIPFSITNVESGRTTQGHRFLG-HEVSIELPSAYEEQLKEQHVIADPNARKQMIQS 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 226 QLEAMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + G L FI V N + + +GN +V+ ARL DA F+K DQ Sbjct: 286 PVKDKNGELLPHFITVRNGNS-HAIENVARGNEKVLRARLSDASFFYKEDQKLN------ 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--- 407 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 339 --------------IDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAGRLQADEDT 382 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 383 LKHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGE 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P+ V++ADKLDT+++F++I P+GS+DPY LRR GI+ I+L+ I + Sbjct: 443 TPSTFTGAVVAMADKLDTIVSFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEE 502 Query: 528 FI------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 503 LFTFVQTDKENELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKL 562 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 563 GAPGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKQNLQEN 616 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ + Sbjct: 617 FSKKDYEAALASLAALKEPIDAYFDHTMVIADNETLKANRLAQMVSLADEIKSFANMNAL 676 Query: 702 V 702 + Sbjct: 677 I 677 >gi|52081072|ref|YP_079863.1| glycyl-tRNA synthetase subunit beta [Bacillus licheniformis ATCC 14580] gi|52786452|ref|YP_092281.1| glycyl-tRNA synthetase subunit beta [Bacillus licheniformis ATCC 14580] gi|319644969|ref|ZP_07999202.1| GlyS protein [Bacillus sp. BT1B_CT2] gi|52004283|gb|AAU24225.1| glycyl-tRNA synthetase (beta subunit) [Bacillus licheniformis ATCC 14580] gi|52348954|gb|AAU41588.1| GlyS [Bacillus licheniformis ATCC 14580] gi|317392778|gb|EFV73572.1| GlyS protein [Bacillus sp. BT1B_CT2] Length = 679 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 205/721 (28%), Positives = 339/721 (47%), Gaps = 63/721 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H + L L LKE+ + + +++ Y +P RL + ++ Sbjct: 1 MSNQDLLLEIGLEEMPARFMHDSMTQLGEKLESWLKEKNIAFGSVKLYNSPRRLAVLVEN 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF R G + KG Y+ Sbjct: 61 VAEKQDDVKEEAKGPAKKIALDENGEWTKAAIGFSRGQGASPED---LYFKDIKGTEYVF 117 Query: 112 VLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + + + +L + + + +PK+MRW + +IRP+K I+ + +E Sbjct: 118 VQKFQKGQDTFSLLPE-LRDLVTSLHFPKNMRWGSED-----LKYIRPIKWIVALFGSE- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ + + G T GHRF + + Y LE V+ DP R+ I+ Sbjct: 171 ----VVPFSVAHVETGRTTQGHRFLGKAA-DLSAPSEYEATLESQFVIADPAKRKQLIVK 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA+ ++ D+DLL+E+ LVE+ V GS+++++L +PEE++ T+K +Q+ F Sbjct: 226 QLDELAAEKSWDIPRDEDLLDEVNHLVEYPTVLFGSYEEEFLAIPEEVLVTTMKEHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L F+ V N + + +GN +V+ ARL DA F+K DQ Sbjct: 286 PVKDENGSLLPYFVTVRNGDSR-ALENVARGNEKVLRARLSDASFFYKEDQKLN------ 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--- 407 +D+ + +L+ +VFH ++G+ G++V R L ++IA++I AD Sbjct: 339 --------------IDENVRKLE--KIVFHEELGSLGDKVRRTEALAERIAEVIGADQET 382 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V L+ RA +SK DL T +V EFPELQG +G++YA + E A+ EH PR Sbjct: 383 VQLIKRAAHISKFDLVTHMVYEFPELQGIMGEKYARMLGEKEEVALAVNEHYMPRQAGGQ 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P++ V+LADKLDT+ +F+ I P+GS+DPY LRR GI++I+L+ I + Sbjct: 443 TPSSIAGAVVALADKLDTVASFFKIGVIPTGSQDPYGLRRQASGIVQILLDRNWGISFKE 502 Query: 528 FIEDQ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 L+ FF RLK L +IR+D+++A+L N + V L Sbjct: 503 LAAFAGQEANSELLEFFKQRLKYVLTAENIRYDVVDAVLESTNLEPYSAVKKAAVLESAA 562 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + ++ + R+ I E + I E+ L+ I+ Sbjct: 563 AKPEFKETAEALARVISISKKSE------TSAIDASLFENPQEEELFKAYEACRQQIETL 616 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 K Y L + EPIE +FD +V+ +D ++ NRL+ + + +I N+ I Sbjct: 617 YQAKDYEGAFSELSKLKEPIEAYFDHTMVHAEDERLKANRLAQMASLAELIRSFANINAI 676 Query: 702 V 702 + Sbjct: 677 I 677 >gi|118602708|ref|YP_903923.1| glycine--tRNA ligase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|229558575|sp|A1AWZ5|SYGB_RUTMC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|118567647|gb|ABL02452.1| glycyl-tRNA synthetase beta chain [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 678 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 204/715 (28%), Positives = 357/715 (49%), Gaps = 57/715 (7%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLE+ EE+P + + + + L L + + Y ++ + TP RL + + L Sbjct: 4 KDFLLELGCEELPPKCLQQLSNAFTHNLTTELDKLKLSYSSVESFATPRRLAVLVSNLQL 63 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 ++I ER GP + A + I+GF +S G+ + ++K K Y ++ Sbjct: 64 QQNDQIIERKGPSISAFDQDIEGFAKSCGVA--KNVLVQKTFGKTQYYFFTKQQKGLKTI 121 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 D+L++ V +AIQ + K MRWS + ++RP ++ +L ++ ++ + Sbjct: 122 DLLESTVDIAIQNISIIKPMRWSNLDTY-----FVRPTHWLIMMLGSD-----VVPASIM 171 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + GN T G RF + Y + LE A + +D R+ I ++A Sbjct: 172 GLASGNTTRGLRFTGERIFDITCAKDYQKILLERAQIEVDFNTRKEIIRKQVIQVAKNNN 231 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 V D+ LL+E+ LVE+ + F G+F K+L +PEE + +K++QK F +G L Sbjct: 232 AIAVIDESLLDEVCALVEYPRAFSGNFSSKFLDVPEEALISAMKSHQKYFHMLDVDGNLM 291 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI++S+ + I+ GN RV+ +RL D+ FW +D+ Sbjct: 292 PVFISVANIESSN-LSVIIDGNERVIRSRLADSEFFWTQDK------------------- 331 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + L+ R+ +L+ V+F +G+ G+++ RI + IA +I A+V RA +L K+ Sbjct: 332 -AHTLESRLDKLN--QVLFMKSLGSMGDKIKRIEIFSGYIATVIGANVKDSARAGLLCKS 388 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL T++V EF +LQG +G YA+ EN + AI EH PR +++P + V++A Sbjct: 389 DLVTDMVGEFADLQGVMGGYYALNDGENKAVASAISEHYHPRFSGDSLPNTSEGLAVAIA 448 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------- 532 DKLDT+ I + P+GSKDPYALRR LG++RI++E+K+++ L + I Sbjct: 449 DKLDTVTGIIGIGQGPTGSKDPYALRRMALGLLRIMIESKLNLNLKELISKSLNENSSAV 508 Query: 533 ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ F RL+ Y ++ + + EA+L ++ ++ LN F ++ Sbjct: 509 NINSVDDIYQFMMRRLRAYYKEQKVNIQVFEAVLAVCPESPYDFHLRVEALNTFTNNQAF 568 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + + KRI IL K + +++ L+ AEK L+ I ++ Sbjct: 569 ENLIETNKRIANIL----KNYSNLLIKVDDSALVEVAEKALFKATKSLSKRI---LNSTN 621 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + L + + I+ FFD+V+VN DD +R RL+L+ +++++ L V +V + Sbjct: 622 YTKNIQELIAFKDIIDEFFDKVMVNTDDVVLRQARLNLINWVRSLFLSVADVSHL 676 >gi|93006879|ref|YP_581316.1| glycyl-tRNA synthetase subunit beta [Psychrobacter cryohalolentis K5] gi|92394557|gb|ABE75832.1| Glycine--tRNA ligase [Psychrobacter cryohalolentis K5] Length = 697 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 202/733 (27%), Positives = 348/733 (47%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ EE+P + + L + L + + + +++ + P RL + ++G+S Sbjct: 1 MSTILFELGCEELPPKSLKPLRDALQESVTEQLADANISFDSIKAFAAPRRLAIQIQGIS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ EE+ GP + G +A GF + G++ I D KGD V Sbjct: 61 DKQPDRTEEKRGPAIKAAFDADGNPTRAAMGFAKGLGIEASKLTTINTD--KGDYVGYVQ 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L I A+ +P K MR S ++RP++ + + + Sbjct: 119 TIQGQATTELLPAIFQTALDNLPIAKRMRSGA-----SRNEFVRPIQWAVLM-----QND 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++D ++ G T GHRFH+P + + Y + L+ V+ D + R+ I N Sbjct: 169 AVVDATIQGHQTGTQTRGHRFHSPDYHNIAHANDYEQLLDGLKVVADFDKRQMLIKNQVK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V + + + LL+E+ LV++ SF+ ++L +P+E + T++ +QK F Sbjct: 229 ALADEVSSDAIVPQSLLDEVTALVDFPIALRASFEARFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI ++NI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 DKAGKLQPYFIFITNIESKDPNQ-IIEGNEKVVRPRLADAEFFFLQDQK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 +PL L VF K+GT E+ RI L IA L+ +D Sbjct: 337 ---------QPLFALTESLKTR--VFQDKLGTIWEKSERIAKLAAFIAALMQQQGQQIDI 385 Query: 413 ----RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +LSKADL + +V E+PELQG G YA L +E + ++EE P+ + + Sbjct: 386 DQTVRAGILSKADLASSLVGEYPELQGIAGTYYARLNDEPEAVAASLEEQYLPKFSGDVL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + I ++LAD+LDTL+ +AI++ P+GSKDP++LRR+ +GI+RI++E ++ I L Sbjct: 446 PQTPVGICLALADRLDTLVGIFAIDQAPTGSKDPFSLRRSAIGILRILIEKQLPINLVAL 505 Query: 529 IEDQ--------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 IE ++ F + R + ++ + D I+A+ L Sbjct: 506 IEQAIKGYSTAEGSKIDKMGDTFTQVMAFLNSRYRAMYTEQGVNVDTIQAVQAINPHMPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ + F + + S KR+ ILA K ++ + L AE+ LY Sbjct: 566 DFDQRIRAVQTFSNLPQASMLADSNKRVANILA---KSEVSVADTVDEALLSEPAEQNLY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + T +Q ++ Y Q+ L S+ EP+ FFD V+VN +D ++ NRL+LL+ + Sbjct: 623 ASVKQAQTVVQPLLEQADYTQVLQTLASLDEPLTQFFDNVMVNSEDTALKANRLALLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V ++ ++ Sbjct: 683 RALFLTVADISEL 695 >gi|221310449|ref|ZP_03592296.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221314772|ref|ZP_03596577.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319695|ref|ZP_03600989.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. JH642] gi|221323972|ref|ZP_03605266.1| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. SMY] gi|255767576|ref|NP_390404.2| glycyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|251757345|sp|P54381|SYGB_BACSU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225185204|emb|CAB14455.2| glycyl-tRNA synthetase (beta subunit) [Bacillus subtilis subsp. subtilis str. 168] Length = 679 Score = 728 bits (1881), Expect = 0.0, Method: Composition-based stats. Identities = 204/721 (28%), Positives = 350/721 (48%), Gaps = 63/721 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++K Sbjct: 1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G + D IK+ KG Y+ Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGAN-VEDLYIKE--VKGIEYVF 117 Query: 112 VLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + + + + +L + I + +PK+MRW +IRP+K I+ + + Sbjct: 118 VQKFQAGQETKSLLPE-LSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + + G T GHRF H + ++S Y L+ V+ DP R+ I + Sbjct: 171 ----VIPFSITNVESGRTTQGHRFLG-HEVSIESPSAYEEQLKGQHVIADPSVRKQMIQS 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 226 QLETMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + G L FI V N + + +GN +V+ ARL DA F+K DQ Sbjct: 286 PVKDKNGDLLPHFITVRNGNS-HAIENVARGNEKVLRARLSDASFFYKEDQKLN------ 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--- 407 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 339 --------------IDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDT 382 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 383 LKHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGE 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P+ V++ADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I + Sbjct: 443 TPSTFTGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLRRQASGIVAILLDRNWGISFEE 502 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 503 LLTFVQTDKENELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKL 562 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 563 GAPGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKQNLQEN 616 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ + Sbjct: 617 FSKKDYEAALASLAALKEPIDAYFDHTMVIADNESLKANRLAQMVSLADEIKSFANMNAL 676 Query: 702 V 702 + Sbjct: 677 I 677 >gi|291288703|ref|YP_003505519.1| glycyl-tRNA synthetase, beta subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885863|gb|ADD69563.1| glycyl-tRNA synthetase, beta subunit [Denitrovibrio acetiphilus DSM 12809] Length = 687 Score = 728 bits (1880), Expect = 0.0, Method: Composition-based stats. Identities = 225/727 (30%), Positives = 344/727 (47%), Gaps = 65/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLEI SEEIPA A E L + G+ + ++ TP R ++ +KGL+ Sbjct: 1 MPDFLLEIGSEEIPAGFIGSACEYLKNDFTKRFTDAGIGFNDIESDGTPRRFYVSIKGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ + +GP G KA GF++S GL D K + ++G V Sbjct: 61 EKQEDREDTIMGPPAAVAFDADGNLTKAGLGFVKSKGLS--EDSLTKAETERGIYLSGVK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + D ++ I+ I+ +P+ KSM W F + RP+ L + + Sbjct: 119 KTKGVPTRDFIEGILIDVIKSIPFRKSMHWGDK-----TFRYARPVHWFLALFGGD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I D+ I GN T GHR HA +V+ D Y L+EA V+ E R + + Sbjct: 170 -VISFDIDGIKSGNKTMGHRIHANEYFEVKDFDDYKAKLKEARVISSTEERISQVREQVA 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + G ++ D+DLLE + GLVE+ MG F+++YL +P E++ ++K +QK F Sbjct: 229 EIEKETGYKVDLDEDLLETVAGLVEYPVALMGEFEERYLDIPAEVLITSMKNHQKYFYVT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N FI VSN +D + G +RV+ ARL DA FW D+ Sbjct: 289 DKDGNLVNKFIGVSNTVPNDP-QLVKTGYARVLRARLADAEFFWANDRKY---------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVD 412 PL+ R+ L VV+ KIGT E++ R R L ++ ++ + Sbjct: 338 ----------PLENRVEELK--KVVYQEKIGTSYEKMERFRKLAVFFSENLNPSAKTDTE 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL +E+V EFPELQG +G YA LQ EN AIEEH PR +++P + Sbjct: 386 RAATLCKADLLSEMVYEFPELQGIMGHRYAKLQGENDVVAQAIEEHYLPRFAGDDLPESD 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 +S+ADKLDT+ +AIN P+G++DPYALRR +GI+ I I L + I + Sbjct: 446 TGAFISMADKLDTICGCFAINLIPTGNQDPYALRRGAIGILSTIKAKGYRIGLKEMIGES 505 Query: 533 NLIL-----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +L F R + L I D +EA D+++TI K Sbjct: 506 ADLLSGYISFDKEKTVELVYDFIIQRYRQILAGEGIPADCVEAACEIS-DDIITIEAAAK 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L+E + + KRI IL KK+ S + E+ L +I+D Sbjct: 565 ALSESKQTKEFASIAAGYKRINNIL----KKSGHTSENYDEALFEDDYERELAKLIADKA 620 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 I + + + L + P++ FF+ V+V D ++R NRLSLL +K++ ++ Sbjct: 621 DQINREVSEENFTMAMTQLLTFSAPVDNFFENVMVMAKDEKIRLNRLSLLNKLKSVFNML 680 Query: 696 INVQKIV 702 ++ KI+ Sbjct: 681 GDLTKII 687 >gi|258593379|emb|CBE69718.1| glycine tRNA synthetase, beta subunit [NC10 bacterium 'Dutch sediment'] Length = 689 Score = 728 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 217/724 (29%), Positives = 362/724 (50%), Gaps = 66/724 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI EEIP+ A +DL+ L +E + + +R + TP RL L+++ L + Sbjct: 4 DLLFEIGIEEIPSGYLTPALKDLATQARRLFEEHRIAFTGVRTFGTPRRLTLHVERLDQN 63 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E +GP A KA GF R G+ + ++K +G+ +A + + Sbjct: 64 QGDLVREVVGPSRAAAFDQEGRPTKAALGFARGQGV-PVEQLRVKT-LDRGEYVVAAIVE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++L ++P I + +PKSMRW AF ++RP++ ++ + ++ Sbjct: 122 QGARLDEILPVVLPRLITSLSFPKSMRWGQG-----AFRFVRPIRWLVALYSG-----RV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I ++ + GN T GHRF + I+V++ YI LEE V+++ RR + A Sbjct: 172 IPFEIDGVISGNKTCGHRFLSRGQIRVRNFQDYIEKLEERYVIVNQHRRRELVTRLAKEA 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ VG + V D +L+E + LVE+ G F+++YL LP E+I ++ +Q+ F Sbjct: 232 AAKVGGKPVFDDELVEMVASLVEYPTAVCGGFEQEYLSLPREVIMTPMRKHQRYFPVTDD 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ +SN++A D G I GN RV+ ARL+DA F+ D+ Sbjct: 292 AGKLLPYFVTISNMKAKDMG-LIRAGNERVLRARLKDAAFFFTEDRRL------------ 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVDRA 414 L +R+ +L + F ++GT E+V R+ L +A+ + +A +A Sbjct: 339 --------ELHERVPQL--RGITFQERLGTMLEKVGRLTELTAYLAEQVAPHLAHDACQA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V+EFP LQG +G+EYA L E AIEEH PR + +P + + Sbjct: 389 AQLCKADLVTTMVKEFPSLQGVMGREYAQLSGEPAVVAQAIEEHYLPRFSGDRLPESLVG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V +AD+LDT+ + I P+GS+DPYALRR GII+I+L ID+PLSQ I Sbjct: 449 ALVGIADRLDTICGCFGIGLIPTGSEDPYALRRHAQGIIQILLNAGIDLPLSQPIYKSLD 508 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 Q ++ F RL+ L +R + DL+EA L + + + + L Sbjct: 509 LLSDRVTLPRERVAQEVMEFLAARLQAILMERGVPGDLVEAALSVDAERVSDAGKRAEAL 568 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F A + + KR+ +IL + S + P+ + AE+ L+ + Sbjct: 569 ATFRREADFTELAAAFKRVIRILPK------DFSKPVDPRRFVSSAERALHGEAATLRAE 622 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + M Y + L+ +I +++FF++VLV V+DR+++DNRL++L+ + ++ + N Sbjct: 623 TEPLMQSGDYVRALQLIAAIRPIVDMFFEEVLVMVEDRDLQDNRLAILKEVADLFCGIAN 682 Query: 698 VQKI 701 KI Sbjct: 683 FSKI 686 >gi|92112142|ref|YP_572070.1| glycine--tRNA ligase [Chromohalobacter salexigens DSM 3043] gi|123265866|sp|Q1R1N7|SYGB_CHRSD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91795232|gb|ABE57371.1| glycyl-tRNA synthetase beta chain [Chromohalobacter salexigens DSM 3043] Length = 688 Score = 728 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 212/720 (29%), Positives = 342/720 (47%), Gaps = 61/720 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+E+ +EE+P A L + L + V + + Y TP RL + ++GL Sbjct: 6 LLVELGAEELPPSAIEPLALALRDGIAKGLADADVAFASAHAYATPRRLAVRVEGLDDKQ 65 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P++ ER GP + G KA +GF RS G+ ++ D KG ++ Sbjct: 66 PDRDIERRGPALAAAFKDGQPTKAAEGFARSCGVTVDDLIHLETD--KGTWLGYRYQESG 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L IV A+Q +P PK+MRW S + RP+ ++ + A+ ++ Sbjct: 124 EATTALLPAIVERAVQALPVPKNMRWGA-----SRTEFSRPVHWLVMLYGAD-----VVP 173 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + G T GHRFHAP I + D Y+ LE A VL D + RR I A Sbjct: 174 ATVLGLEAGRTTRGHRFHAPDAIDLAHADDYLDALENAYVLADMQRRRERIREQVLAEAE 233 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V D+DLL+E+ GLVEW GSFD+++L +P E + ++K NQK F +G Sbjct: 234 VNEATAVIDEDLLDEVSGLVEWPVALTGSFDERFLDVPAECLISSMKANQKYFHLLDAQG 293 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D +++GN +V+ RL DA F+ D+ Sbjct: 294 TLKPLFITVSNIESRDP-QQVIEGNEKVIRPRLADAAFFYDTDRK--------------- 337 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 + L R + L+ VVF +GT ++ RI + IA I D RA L Sbjct: 338 -----QSLASRRSALE--SVVFQQSLGTLADKAQRIEAISSFIASRIGGDADHASRAAQL 390 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL TE+V EFPELQG +G YA E A+ E PR ++VP + + Sbjct: 391 AKCDLVTEMVLEFPELQGIMGTYYARQDGEPEEVAQALHEQYLPRFASDDVPATPAGLAL 450 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI---------------- 521 +LAD+LDTL + I ++PSG+KDP+ALRRA +G++ I+++ ++ Sbjct: 451 ALADRLDTLTGIFGIGQRPSGTKDPFALRRAAIGVLNILVKAELDLDLRELLELAAAQHG 510 Query: 522 DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 D+P ++ +++ + DR + + D I ++ A+ L I+ ++ F Sbjct: 511 DLPKAE-GLVDDVLDYMLDRFRAWTQDEGIAVEVYLAVRARPVTRPLDFARRIRAVHAFS 569 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ IL+ K+ + S + L EAE L + ++ Sbjct: 570 QREEAVALAAANKRVSNILS---KQQHDGSTSVDTGLLQAEAETTLSTALEQCHQSVRPL 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D RY + D+L + P++ FF+ V+V +D VR NRL+LL ++++ L V ++ ++ Sbjct: 627 LDAARYAEALDVLAQLRGPVDAFFEDVMVMAEDEAVRRNRLALLASLQSLFLEVADIAQL 686 >gi|56696243|ref|YP_166600.1| glycyl-tRNA synthetase subunit beta [Ruegeria pomeroyi DSS-3] gi|56677980|gb|AAV94646.1| glycyl-tRNA synthetase, beta subunit [Ruegeria pomeroyi DSS-3] Length = 735 Score = 728 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 270/760 (35%), Positives = 402/760 (52%), Gaps = 86/760 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL + L E G+ Y TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAGEDLKKRITDGLVEAGLTYAYAAALSTPRRLVLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP + EER GP+VGA ++A++GFLR G+ + ++ KG +Y A + KP R Sbjct: 61 DASPTQREERKGPKVGAPEQAVEGFLRGAGISRDQLEE--RETPKGAIYFATIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW + W+RPL+SILCIL E A +++ LD+ Sbjct: 119 AAIVAEVLEDTIRNFPWPKSMRWGAG-----SLRWVRPLQSILCILTTE-AGAEVVPLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V S + Y L+ A V+LDP R I NDA +A A G Sbjct: 173 DGIKAGDSTAGHRFMAPARFSVTSFEDYQVKLKRAFVVLDPAERAEHIWNDAQNMAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V MG ++L LP E+++ +++ +QK F R + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLMGQIGSEFLDLPAEVLQTSMREHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN +V++ARL DA FW D AL+ Sbjct: 293 ERFVTVANRETADNGATILAGNQKVLSARLADAKFFWDNDLRAAHAGMDAWVQALE---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+G+QG+R+ RI L +++A ++ A+ ++A L+KA Sbjct: 349 ---------------NVTFHNKLGSQGDRIRRIAALARELAPVVGAEADQAEQAATLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y ++ + ++H P GP + VPT +S+ V+LA Sbjct: 394 DLSSEMVFEFPELQGLMGRYYIAASGQDAAIAAVAQDHYSPLGPSDEVPTAPLSVIVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------------- 527 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + +PL + Sbjct: 454 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLANDLRLPLDRSIDAQLLRHKYHA 513 Query: 528 ----------FIEDQNLILF--FHDRLKLYLHDRD------------------------- 550 E + +F + +K L D Sbjct: 514 SNGEAALRDLIEEIADHGVFGAAFETIKEKLGDAGALEALAGDVPDLSADLLAFIHDRLK 573 Query: 551 -------IRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 IRHD+I+A + ND+L +V + LN ++ GE + KR IL Sbjct: 574 VFLRDEGIRHDVIDACIAMAGNDDLNLLVKRARALNTVIATEDGENLVQGFKRANNILTQ 633 Query: 603 EEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 E+K+ E S ++ ++EK L+A + + I ++ + + + ++ P+ Sbjct: 634 AEEKDGVEYSFGADIKFAEADSEKALFAALEQAESKINVALKAEDFAAAMTAMAALRAPV 693 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FFDQV VN D++ VR NRL+LL I+ + V ++ +I Sbjct: 694 DAFFDQVQVNSDNQVVRRNRLNLLSQIRKVCSSVADLTRI 733 >gi|227892548|ref|ZP_04010353.1| glycyl-tRNA synthetase beta chain [Lactobacillus ultunensis DSM 16047] gi|227865669|gb|EEJ73090.1| glycyl-tRNA synthetase beta chain [Lactobacillus ultunensis DSM 16047] Length = 687 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 208/732 (28%), Positives = 349/732 (47%), Gaps = 77/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTKKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D K+ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTT-DDIYFKELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ D+L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 120 QKEGKK-ASDILMGM-SDIIKDMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 --VIPVKILDITAGRKTEGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + L ++ D+DLLEE+ LVE+ VF GSFDKKYL +P+E++ ++K NQ+ F Sbjct: 227 NELVKKNHWQVKPDRDLLEEVTYLVEYPTVFAGSFDKKYLNIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDEDGNLINHFIAVRNGN-KDYLDNVISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVA 409 PL + RL DV FH KIG+ E++ R+R++G +A L D V Sbjct: 337 -----------PLSHFVDRLK--DVSFHDKIGSMAEKMQRVRLIGDYLAKRWNLPDNVVK 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGENEEVSVAIKEHYMPTTAEGPLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 444 ETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEVL 503 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 DQ + F DR+K YL ++D+++A+L + + Sbjct: 504 PEIISMLNGVTPAKLPKGDADQEIADFIRDRVKQYLQKNKFKYDIVDAVLASSQQDPSQV 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + S RI IL + K ++++ +EK LY Sbjct: 564 LAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKG---NVDVDESLFDDNSEKELY-- 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +Q D + + + I+ +FD ++ + +V++NRL+ L + Sbjct: 619 -----VGVQNLQDVESLADLYQGFVQLQPVIDQYFDTNMIMAKNEKVKNNRLAQLYAVSE 673 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 674 LADRLGDLSKLV 685 >gi|91791377|ref|YP_561028.1| glycyl-tRNA synthetase subunit beta [Shewanella denitrificans OS217] gi|123061408|sp|Q12TC1|SYGB_SHEDO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91713379|gb|ABE53305.1| Glycine--tRNA ligase [Shewanella denitrificans OS217] Length = 694 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 214/725 (29%), Positives = 338/725 (46%), Gaps = 66/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+P + A+ L + + + Y P RL L + GL+ Sbjct: 5 NLLIEIGTEELPPKSLRTLADSFLANFSDELVKADLPFTAATWYAAPRRLALSITGLAVA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDADGNPTKAAQGWARGNGITVEQAERLVTD--KGEWLVHQAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++ + A+ K+P PK MRW + +IRP+ ++ +L +E + Sbjct: 123 VGVQTNSLIAAMAQRALDKLPIPKPMRWGANST-----QFIRPVHTVTMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I +L I I GHRF ++ D+Y+ L E+ VL D + R+ I DA Sbjct: 173 IGGELLGIKSDRIIRGHRFMGQASFQLDHADNYLSALKEQGKVLADYQLRKAIIKADAEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G +DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGVADIQEDLLEEVASLVEWPIVLTASFEEKFLNVPAEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI++ D I+ GN +VV RL DA F+ D+ + Sbjct: 293 KSGKLLPNFIFVTNIESKDP-QQIISGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-----ADVA 409 L R++ L+ VVF ++GT R RI L IA ++ + Sbjct: 341 ---------SLASRLSSLET--VVFQKQLGTLKARAERISQLAGFIATELNNNNLASSSV 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSKADL T +V EF + QG +G YA L E + AIEE KP+ + VP Sbjct: 390 DAARAGLLSKADLMTNMVMEFTDTQGTMGMHYARLDGETEAVAIAIEEQYKPKFSGDTVP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T +S V+LA+KLDTL+ + I + P G+ DP+ALRRA +GI+RII+ENK+ + L I Sbjct: 450 TASVSCAVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGILRIIVENKLPLDLVDLI 509 Query: 530 ED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++++ F R + + D+ I+ D+I A+L + Sbjct: 510 AKAQALHGTNLTNGNTSEDVLEFLMARFRSWYQDKGIQVDVILAVLARRPTRPADFDSRV 569 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 ++ F + KR+ ILA K E+ ++P L AEK L ++ Sbjct: 570 NAVSHFRGLEASTALAAANKRVSNILA---KVEGELPANVTPSLLTETAEKALAEQLASL 626 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L Sbjct: 627 QPKLAPLFATGDYQQALTLLAELRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLH 686 Query: 695 VINVQ 699 V ++ Sbjct: 687 VADIS 691 >gi|293556343|ref|ZP_06674924.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1039] gi|291601410|gb|EFF31681.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecium E1039] Length = 691 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 212/733 (28%), Positives = 347/733 (47%), Gaps = 75/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + + L L + + Y + + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSMKQLEEKTAKFLDKNQLTYDTIETFSTPRRLAIKVTNI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA +GF+R GL T + I KG Y+ V Sbjct: 61 PERQADSEEEVKGPAKKIALDADGNWTKAAEGFVRGQGLTTDA---ITFRELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T + I+ + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKYTHGKEAKEVLTGLADVIKSLTFPVTMHWAEYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++II ++ ++ + GHRF + Y L E V+ P+ R+ I+ A Sbjct: 168 DEIIPFEILDVKTDRASRGHRFLGED-VTFAHAKEYEEKLNEQFVIASPQKRKEMIITQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA + D+DLLEE+ LVE+ VF G F++KYL +PEE++ ++K +Q+ F Sbjct: 227 NELAEKNHWIIDLDEDLLEEVNNLVEYPTVFSGDFEEKYLSVPEEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI N + +GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGMLLPHFISARNGD-RVKLENVGRGNQKVLTARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 +DQ + +L V FH KIG+ E++ R++V+ + I + + D ++ Sbjct: 336 ----------ASIDQYVEKLKT--VTFHEKIGSIYEKMQRVQVIARIIGEQVRLSDEELM 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T ++ EFPELQG +G++YA+L+ E + AI EH P ++P Sbjct: 384 DLQRAAEIYKFDLVTNMIGEFPELQGIMGEKYALLKGEKPAVATAIREHYMPISSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKLD++ +F+A+ PSGS DPYALRR G++RII K PLS Sbjct: 444 ETTVGSVLAIADKLDSIFSFFAVGMIPSGSNDPYALRRQAYGVVRIIESKKWAFPLSVLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E Q +I F RL+ L ++IRHD+IEA+L E +L Sbjct: 504 ETISEVISKDADRFGIGLSAGQQQVIDFIKGRLRQLLTTKNIRHDVIEAVLNAEQKDLTK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + + + + + + R+ + +K E E+ P+ EAEK L+ Sbjct: 564 VFAAAQLFKQHLADEDFKPSMEALTRVVNL---AKKAELEKQSEVDPELFENEAEKELHK 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T + ++ Y Q L S+ IE +FDQ +V ++ VR NRL+ L I Sbjct: 621 AVEAMKTSFADQTINENYDQ----LVSLRPLIENYFDQTMVMAEEPAVRKNRLTQLSQIA 676 Query: 690 NIILIVINVQKIV 702 + L + ++ +I+ Sbjct: 677 AMALSLASLDQII 689 >gi|167045601|gb|ABZ10251.1| putative glycyl-tRNA synthetase beta subunit [uncultured marine crenarchaeote HF4000_APKG10I20] Length = 688 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 219/727 (30%), Positives = 329/727 (45%), Gaps = 68/727 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ LEI SEEIP+ A E + L + TP RL + +KG+ Sbjct: 1 MPELFLEIGSEEIPSGYVQPALEYMREELASFFSRNRIKAGVPEILGTPRRLVVSVKGVD 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +E GP + G KA GF R GL ++ KG+V A + Sbjct: 61 ALQEDIVELFHGPNISVAYDDQGKPTKAAIGFARGKGLDVSQLS--REKTPKGEVVCARV 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K R D L +P+ I +P+ K MRW+ P + RPL I + + Sbjct: 119 EKKGRPTPDHLNEFLPIFIGNIPFAKKMRWADKTRP-----FARPLHWITALFDGQP--- 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + I CG+++ GHRF P +V+ L Y+ +L+DPE R+ IL Sbjct: 171 --LGFSFDGIACGDLSQGHRFLKPDKFQVKDLASYLEKSANHFLLVDPEVRKQKILEQVQ 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA G + ED +LL + LVE+ G FD ++L LP+EL+ +T+K +QK F Sbjct: 229 ILAQEAGGFVEEDPELLNIVNYLVEFPVAIRGDFDPRFLELPKELLVMTMKHHQKYFPVS 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI +SN+ A G I GN RV+ ARLEDA F+ D+ Sbjct: 289 DGKGNLLPGFITISNMSA---GHEIKNGNERVLRARLEDARFFYNEDKK----------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-LVD 412 K LD + L VVF K+GT E++ RI L + ++ D Sbjct: 335 ---------KNLDDFVESLK--GVVFQKKLGTLYEKMERICDLARILSTHACPDKEPQAL 383 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL T +V EFPELQG +G YA E + AI+EH +P ++ P ++ Sbjct: 384 RAGRLCKADLVTLMVYEFPELQGIMGGYYATHSGEEPTVAQAIQEHYRPAFAGDDPPASE 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + +++ADKLDT++ + PSGS+DPY LRR LGII+I L + L +E Sbjct: 444 LGAVIAVADKLDTILGCIGVGLIPSGSEDPYGLRRNALGIIQIFLHRGWQVSLDNLVEEG 503 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++ F R K YL +D I+ +L D+++ I + Sbjct: 504 LRSMGSKIKLDPETIKNHVMELFSQRYKTYLDAEGFPYDAIDCVLSTGLDSIVDIRAKVS 563 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +E E ++ +R+ IL N E E+ L AEK+L+ Sbjct: 564 AFSELKKQPYFEPLAIAFRRVVSIL------NDEAEGEVDTGLLNEPAEKKLFEEYLKVR 617 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + +K + Q + + I ++ FFD+V+V VDD +R NRL LL I + + Sbjct: 618 GPVFRHIQNKEFSQALEKIVEIKPAVDRFFDEVMVMVDDVSLRKNRLHLLHQISGLFSGL 677 Query: 696 INVQKIV 702 + +I+ Sbjct: 678 ADFSRII 684 >gi|227878691|ref|ZP_03996605.1| glycyl-tRNA synthetase beta subunit [Lactobacillus crispatus JV-V01] gi|256843285|ref|ZP_05548773.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 125-2-CHN] gi|256850358|ref|ZP_05555786.1| glycyl-tRNA synthetase subunit beta [Lactobacillus crispatus MV-1A-US] gi|262046494|ref|ZP_06019456.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] gi|293380132|ref|ZP_06626219.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 214-1] gi|312978176|ref|ZP_07789920.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus CTV-05] gi|227861706|gb|EEJ69311.1| glycyl-tRNA synthetase beta subunit [Lactobacillus crispatus JV-V01] gi|256614705|gb|EEU19906.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 125-2-CHN] gi|256712755|gb|EEU27748.1| glycyl-tRNA synthetase subunit beta [Lactobacillus crispatus MV-1A-US] gi|260573365|gb|EEX29923.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] gi|290923302|gb|EFE00218.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 214-1] gi|310894894|gb|EFQ43964.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus CTV-05] Length = 687 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 204/732 (27%), Positives = 349/732 (47%), Gaps = 77/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D ++ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDQDGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ + +L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 120 QKEGKKASDILLG--MSDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + +I G T GHRF + + + D Y L++ V+ D + R++ I+ Sbjct: 170 --VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQFVIADADERKDMIVRQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 227 NELVKKNNWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLKIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDETGKLINHFIAVRNGN-KDYLDNVISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 337 -----------PLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLAKRWDLPENVVK 383 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 444 ETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEVL 503 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 DQ + F DR+K YL D ++D+I+A+L + I Sbjct: 504 PEIISMLNGVTPAKLPKSDADQEIADFIRDRVKQYLQKNDFKYDIIDAVLASSQQDPSQI 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + S RI IL + K+ + + +EK LYA Sbjct: 564 LAAATVLQLHHDDEEFKPVVESLTRIDNILKKAKFKS---NTAVDESLFDDNSEKELYAG 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + D + + + I+ +F+ ++ D +V++NRL+ L + Sbjct: 621 VQNLQ-------DIESLADLYQGFVQLQPVIDQYFETNMIMAKDEKVKNNRLAQLYAVNE 673 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 674 LADRLGDLSKLV 685 >gi|295693060|ref|YP_003601670.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus ST1] gi|295031166|emb|CBL50645.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus crispatus ST1] Length = 687 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 204/732 (27%), Positives = 349/732 (47%), Gaps = 77/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D ++ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDQDGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ + +L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 120 QKEGKKASDILLG--MSDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + +I G T GHRF + + + D Y L++ V+ D + R++ I+ Sbjct: 170 --VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQFVIADADERKDMIVRQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 227 NELVKKNNWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLKIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDETGKLINHFIAVRNGN-KDYLDNVISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 337 -----------PLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLAKRWDLPENVVK 383 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 444 ETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEVL 503 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 DQ + F DR+K YL D ++D+I+A+L + I Sbjct: 504 PEIISMLNGVTPAKLPKSDADQEIADFVRDRVKQYLQKNDFKYDIIDAVLASSQQDPSQI 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + S RI IL + K+ + + +EK LYA Sbjct: 564 LAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKS---NTAVDESLFDDNSEKELYAG 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + D + + + I+ +F+ ++ D +V++NRL+ L + Sbjct: 621 VQNLQ-------DIESLADLYQGFVQLQPVIDQYFETNMIMAKDEKVKNNRLAQLYAVNE 673 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 674 LADRLGDLSKLV 685 >gi|192359481|ref|YP_001980580.1| glycyl-tRNA synthetase subunit beta [Cellvibrio japonicus Ueda107] gi|190685646|gb|ACE83324.1| glycyl-tRNA synthetase, beta subunit [Cellvibrio japonicus Ueda107] Length = 692 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 195/724 (26%), Positives = 332/724 (45%), Gaps = 61/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + + L + + +++ Y P RL L ++ L+ Sbjct: 3 ADFLVELGTEELPPKNLKNLMNAFAESIQADLTALELSFTSVKAYAAPRRLALLVENLAS 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 SP K GP G KA F G+ + + K + +A L Sbjct: 63 ESPSKELVVWGPPAAIAFDKEGQPTKAALAFAEKNGIAASALK--AESDGKVEKLVARLA 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + ++L+ +V A+ K+P K M+W + ++RP+ ++ + ++ Sbjct: 121 QDGQKTVELLEKVVGDALAKLPIAKRMKWGSKRE-----EFVRPVHWLVMLFGSD----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 ++ + + G T GHRFH PI++ + Y L+ V+ D R I + Sbjct: 171 VVSASVLGLTAGRTTRGHRFHYNQPIELANASDYASVLKNTGYVVADFAERSAIIKDQVE 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A +G V D LL+E+ LVEW G F++++L +P E + ++K +QK F Sbjct: 231 AEAKNIGGVAVIDPALLDEVTALVEWPVALTGQFEERFLAVPAEALIASMKEHQKYFHVV 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V+N+Q+ D I+ GN RV+ RL DA F++ D+ Sbjct: 291 DANGKLKNYFITVANLQSKDPTQ-IIDGNERVIRPRLSDAAFFFETDKK----------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L RL +VF A++GT ++ R+ L + IA + AD A R Sbjct: 339 ---------TTLASLRERLKT--IVFQAQLGTIYQKTERVAKLAQFIAGKLKADEASAVR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L K+DL T +V EF ++QG G YA+ EN A+ E PR + +P Sbjct: 388 AAELCKSDLVTNMVGEFDDMQGIAGFYYALNDGENAEVAAAMNEQYMPRFAGDQLPATAT 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 ++LAD+LDT+ + I ++PSGSKDP+ALRRA++ ++R+++E + + L + + Sbjct: 448 GAIIALADRLDTISGIFGIGQQPSGSKDPFALRRASIAVLRLLVEKNLALDLRELLTFAK 507 Query: 534 LIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + DR + D I ++ +A+ + L I + +N Sbjct: 508 AQHNNLTVGEELVDQVLGYMLDRFRAMFEDAQIPAEVFQAVNAKQLSQPLDINQRVLAVN 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 EF + + + KR+ ILA K+N ++S ++P L EAEK L + + Sbjct: 568 EFSKLPQAQALAAANKRVSNILA---KQNADVSAAVNPALLQEEAEKNLAQAVGAKAAVV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y Q L + ++ FFD V+V DD ++ NRL+LLQ ++ + L V ++ Sbjct: 625 APLFASREYTQALAALADLQPVVDAFFDNVMVMADDPALQQNRLALLQQLRGLFLEVADI 684 Query: 699 QKIV 702 +V Sbjct: 685 SYLV 688 >gi|254976024|ref|ZP_05272496.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-66c26] gi|255093412|ref|ZP_05322890.1| glycyl-tRNA synthetase beta chain [Clostridium difficile CIP 107932] gi|255315157|ref|ZP_05356740.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-76w55] gi|255517826|ref|ZP_05385502.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-97b34] gi|255650942|ref|ZP_05397844.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-37x79] gi|260684012|ref|YP_003215297.1| glycyl-tRNA synthetase subunit beta [Clostridium difficile CD196] gi|260687672|ref|YP_003218806.1| glycyl-tRNA synthetase subunit beta [Clostridium difficile R20291] gi|306520822|ref|ZP_07407169.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-32g58] gi|260210175|emb|CBA64364.1| glycyl-tRNA synthetase beta chain [Clostridium difficile CD196] gi|260213689|emb|CBE05557.1| glycyl-tRNA synthetase beta chain [Clostridium difficile R20291] Length = 688 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 224/728 (30%), Positives = 362/728 (49%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL SD K+ K + A Sbjct: 61 SDRQSDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLS-ESDIYFKQ-VGKEEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPETIKSVVFPKAMRWGGKN-----LKFARPIRWIVALL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKLLPNFIAVRNGDSY-RIDNVKAGNEKVLEARLADALFFYREDTK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + A Sbjct: 337 ----------RNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFNKEEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE RLY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIRLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KVKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|255656411|ref|ZP_05401820.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-23m63] gi|296450142|ref|ZP_06891903.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP08] gi|296878523|ref|ZP_06902528.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP07] gi|296260905|gb|EFH07739.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP08] gi|296430330|gb|EFH16172.1| glycyl-tRNA synthetase beta subunit [Clostridium difficile NAP07] Length = 688 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 222/728 (30%), Positives = 364/728 (50%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL SD K+ K + A Sbjct: 61 SDRQSDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLS-ESDIYFKQ-VGKDEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPDTIKSVVFPKAMRWGGKN-----LKFARPIRWIVTLL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIVSSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKLLPNFIAVRNGDSY-RIDNVKAGNEKVLEARLADALFFYREDTK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + A Sbjct: 337 ----------RNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD+++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIVGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFNREEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE +LY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIKLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +++ + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KVRVKQLLKDKKYGVALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|148244811|ref|YP_001219505.1| glycyl-tRNA synthetase beta subunit [Candidatus Vesicomyosocius okutanii HA] gi|229558586|sp|A5CW91|SYGB_VESOH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146326638|dbj|BAF61781.1| glycyl-tRNA synthetase beta subunit [Candidatus Vesicomyosocius okutanii HA] Length = 677 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 216/715 (30%), Positives = 361/715 (50%), Gaps = 57/715 (7%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ EE+P + + L+ L + + Y ++ + TP RL + + GL Sbjct: 5 DFLLELGCEELPPKNLQHLSNALTYNLTTEFDKLKLSYSSVESFATPRRLAVLVNGLQLQ 64 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + ER GP + KAI+GF +S G+ + +K K Y ++ D Sbjct: 65 QNNQTIERKGPLISELDKAIEGFAKSCGVA--RNMLTQKAFGKIQYYFFTKQQIGLKTID 122 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L+++V AIQ +P K MRWS + ++RP+ ++ +L ++ ++ + Sbjct: 123 LLESVVNTAIQNIPIAKPMRWSNLDTY-----FVRPVHWLIMMLGSD-----VVPASIMG 172 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 + NIT G RF + Y + L E+A + +D + R+ I +A Sbjct: 173 LISSNITRGLRFTDECIFDIICAKDYQKTLLEKAQIEVDFDMRKAIIRKQIIHVAQNNNA 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 V D+ LL+E+ LVE+ VF G+F K+L +PEE++ +K+ QK F G L + Sbjct: 233 TAVIDESLLDEVCALVEYPCVFSGNFSSKFLDIPEEVLISVMKSYQKYFHMLDMNGNLMS 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 FI V+NI++SD + I+ GN RV+ +RL D+ FW +D+ Sbjct: 293 SFISVANIESSD-LSVIIDGNERVIRSRLSDSEFFWIQDK-------------------- 331 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 + L+ R+ RL+ V+F +G+ G++ RI +L IA +I A+V RA +L K+D Sbjct: 332 AYTLEFRLDRLN--QVLFMKSLGSMGDKAKRIEILSGYIAGVIGANVKDSSRAGLLCKSD 389 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EF +LQG +G YA EN + AI EH +PR +++P + VS+AD Sbjct: 390 LVTDMVGEFADLQGVMGGYYAFNDGENKAVSVAISEHYQPRFSGDSLPNTIEGLVVSIAD 449 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------- 528 KLDT+ + I + P+GSKDPYALRR LG++RIILE+K I L + Sbjct: 450 KLDTITGIFGIGQGPTGSKDPYALRRMALGLLRIILESKFHINLKELISESLNAHLSVVN 509 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + ++ F +RL+ Y ++ + +A+L ++ I+ LN F ++ + E Sbjct: 510 TNKANDIYQFMMERLRSYYKKHEVSMQVFDAVLAVCPESPYDFHLRIRALNTFTNNQELE 569 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K ++S+++ L+ AEK L+ I S+ Y Sbjct: 570 NLIEINKRISNIL----KNCSDLSIKVDDSVLIETAEKTLFKATKILAKRISNSI---NY 622 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L ++ + I+ FFD+V+VN DD E+R RL+L+ +++++ L V ++ +V Sbjct: 623 TKNMKELIALKDMIDEFFDKVMVNTDDVELRQARLNLINWVRSLFLSVADISYLV 677 >gi|255307459|ref|ZP_05351630.1| glycyl-tRNA synthetase beta chain [Clostridium difficile ATCC 43255] Length = 688 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 222/728 (30%), Positives = 361/728 (49%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL SD K+ K + A Sbjct: 61 SDRQSDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLS-ESDIYFKQ-VGKEEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPETIKSVVFPKAMRWGGKN-----LKFARPIRWIVTLL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG + FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKMLPNFIAVRNGDSY-RIDNVKAGNEKVLEARLADALFFYREDTK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + A Sbjct: 337 ----------RNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + + FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFNKEEVVEQTMNFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE +LY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIKLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KIKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|255101590|ref|ZP_05330567.1| glycyl-tRNA synthetase beta chain [Clostridium difficile QCD-63q42] Length = 688 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 223/728 (30%), Positives = 362/728 (49%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL SD K+ K + A Sbjct: 61 SDRQNDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLS-ESDIYFKQ-VGKEEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPETIKSVVFPKAMRWGGKN-----LKFARPIRWIVTLL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKLLPNFIAVRNGDSY-RIDNVKAGNEKVLEARLADALFFYREDTK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + A Sbjct: 337 ----------RNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFNKEEVVEQIMSFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE +LY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIKLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KVKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|260886751|ref|ZP_05898014.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|330839432|ref|YP_004414012.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|260863603|gb|EEX78103.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|329747196|gb|AEC00553.1| glycyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] Length = 688 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 219/730 (30%), Positives = 343/730 (46%), Gaps = 72/730 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EEIPA ++L LKE + + +R TP RL L ++GL Sbjct: 1 MSKDLLLEIGTEEIPAHAMPGMLKELGENAKKALKELRLAHGAVRTLGTPRRLALVVEGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE+ GP V G KA +GF R G++ D ++ G VY A+ Sbjct: 61 AEKQEDVAEEKRGPSVQVAFDAAGKPTKAAEGFARGQGIKA-QDLVVRD----GYVY-AL 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + E VL ++P I +P P SMRW F +IRPL+ ++ + Sbjct: 115 VEEAGESAEKVLAKMLPELISGLPLPNSMRWGDLD-----FRFIRPLRWLVALY-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ +L + GN + GHRF + ++ HY E+A V++DP R+ I Sbjct: 165 DRIVPFELACVKSGNTSRGHRFLSTGDFTIEDAAHYEEACEKAFVIVDPARRKALIEEGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A A G +LLEE++ LVE+ GSF+ KYL LP + + ++ +Q+ F Sbjct: 225 VEAAKAHGGTAEITPNLLEEVLYLVEYPTALAGSFEDKYLALPPDAVITPMRDHQRYFPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ +G L F+ V N + + GN RV+ ARL DA F+ D+ Sbjct: 285 KSADGKLLPLFLTVRNGG-KEYLETVQHGNERVLRARLADAQFFFDEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 K L + + +L VVF +GT ++ R+ L KIA IDA + Sbjct: 334 ----------KSLAEHLEKLKT--VVFQEGLGTVYDKSLRLEKLAGKIADAIDANDAEKK 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSKADL T +V EF ELQG +GKEYA L E AI+EH PR + P Sbjct: 382 AAMRAALLSKADLVTGMVTEFTELQGVMGKEYARLDGEGEDVALAIDEHYMPRFAGDAQP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + VSLADK+D ++ ++ P+GS+DP+ALRR LG++ I+E + I L + Sbjct: 442 KTRAGLVVSLADKMDNIVATFSRGLIPTGSQDPFALRRQALGMVHSIIEAGVAISLHDLV 501 Query: 530 E-----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F RLK L + IR+D+ +A+L D++ ++ Sbjct: 502 DWTMDLLKITDAAVCEKMQADVADFMRLRLKNVLAEEGIRYDIADAVL-GNVDDVRRVLL 560 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K + E ++ + + R+ + A EK + + EK L + Sbjct: 561 AAKAVREQLAAPGMADAVQAFVRVANLAAKAEKGEVH----VDAALFETDEEKELMKAYT 616 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + ++ + D + EPI FFD V+V DD ++R NRLSLL+ I +++ Sbjct: 617 SARSAAESLIEAHDFVGAIDDFKDLAEPINAFFDAVMVMADDEKIRRNRLSLLKGIDDLL 676 Query: 693 LIVINVQKIV 702 + KIV Sbjct: 677 REAADFSKIV 686 >gi|222054674|ref|YP_002537036.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. FRC-32] gi|254781851|sp|B9M5V4|SYGB_GEOSF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|221563963|gb|ACM19935.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. FRC-32] Length = 687 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 207/728 (28%), Positives = 347/728 (47%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LEI +EEIPA KA D+ ++ L+ + + ++ TP RL L +K + Sbjct: 1 MAKELFLEIGTEEIPAGFLPKAMADMEGLIRKELESARIGFGEVKTMATPRRLALVVKNV 60 Query: 60 SPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + +GP KA +GF R G+ + I + KG+ Sbjct: 61 SAQQTDAEITTMGPAKKVAFNDDGTTTKAGEGFARGQGVDASALSIIATE--KGEYVAVT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ +L I+P I +P+ KSMRW + RP+ I+ + Sbjct: 119 KKEIGVATAGLLAEILPRLINNIPFKKSMRWGDQE-----VRFARPMHWIVALFDG---- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + G+++ GHRF A V+ HY+ + E V+ DP R+ I + Sbjct: 170 -TVIPFAFGNVQSGSMSRGHRFMANTSFPVRDFGHYLEECERHFVIPDPAKRKEIISREI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A A G ++ D+ LLE++ LVE+ G+F ++L +P+E++ +++ +Q+ F Sbjct: 229 ERVAKAAGGNVLPDEGLLEQVTYLVEYPSAVHGTFSAEFLAVPKEVLITSMREHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI ++N D + +V+GN V+ ARL DA F++ D+ Sbjct: 289 VDDKGKLLPGFITINNTLTEDP-SVVVKGNEMVLRARLSDARFFFEEDKKV--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 PL++R+ L V++ AK+GT E++ R R L + +A+ + + A V Sbjct: 339 -----------PLEKRVEALK--SVLYQAKLGTSYEKMERFRTLAEGLAEQLQPPLKAKV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A L KADL T +V EFPE+QG +G+EYA+LQ + AI EH P +P + Sbjct: 386 FQAATLCKADLVTGMVGEFPEVQGIMGREYALLQGVDAEVARAIAEHYLPNQAGGELPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 VS+ADK+DT+ +++ PSGS DPYALRRA LGII IIL ++PL + Sbjct: 446 DTGAFVSIADKVDTICGCFSVGLIPSGSADPYALRRAALGIINIILAKGYNLPLIPLVTK 505 Query: 532 -----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +++ FF R L DR D++EA++ DNL+ I Sbjct: 506 AIGQLEGRLTRKKEEVLADVLDFFKGRFINLLTDR-FPADVVEAVVAVSFDNLVEATAKI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L +F E ++ KR+ I+ ++++ + + AE L+ Sbjct: 565 EALAQFKKRDDFEPLAVAFKRVCNIVK------EQVTVPVDDKLFQDAAEGTLFQSFKSA 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++E + + Y + S+ ++ FFD+V+V +D VR+NRL+LLQ IK++ Sbjct: 619 SSMVEEKVVQREYLAALTQIASLKGAVDDFFDKVMVMAEDEGVRNNRLALLQEIKSLFRD 678 Query: 695 VINVQKIV 702 + + K+ Sbjct: 679 IADFGKLT 686 >gi|126700048|ref|YP_001088945.1| glycyl-tRNA synthetase subunit beta [Clostridium difficile 630] gi|122973600|sp|Q182B8|SYGB_CLOD6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|115251485|emb|CAJ69318.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Clostridium difficile] Length = 688 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 222/728 (30%), Positives = 361/728 (49%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L EI EE+P+R E L L L E + + + Y TP RL L ++GL Sbjct: 1 MKNYLLFEIGVEEMPSRFVGSTLEQLKNNLSKLFDENRIAFDKINAYGTPRRLTLVVEGL 60 Query: 60 SPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP K GF++S GL SD K+ K + A Sbjct: 61 SDRQNDLEEEIKGPAKKIAVDAENNLTKPALGFIKSKGLS-ESDIYFKQ-VGKEEYIFAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ + +VLK I+P I+ V +PK+MRW + + RP++ I+ +L Sbjct: 119 IKQDGKETSEVLKDILPETIKSVVFPKAMRWGGKN-----LKFARPIRWIVALL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+++ DL+ I N+T GHRF I+V S++ Y LE+ ++LD R+ I Sbjct: 169 DKVLEFDLEGIISSNVTKGHRFLGESTIEVDSIEDYFEKLEKNYIVLDQNKRKEMIRKQC 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+++G E+ D+DLLEE+ LVE+ F G FD Y+ LP+E++ +K +Q+ F Sbjct: 229 IEVANSLGGEVEFDEDLLEEVTYLVEYPTAFYGEFDVDYIKLPKEVVITPMKQHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L FI V N + + GN +V+ ARL DAL F++ D Sbjct: 289 L-KEGKLLPNFIAVRNGDSY-RIDNVKAGNEKVLEARLADALFFYREDTK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVAL 410 + L+ + +L VVF K+GT ++ R+ L I + + Sbjct: 337 ----------RNLESYIEKLKT--VVFQVKLGTIYDKTLRLEKLSADILDSLGLVDEKTD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +GKEYA + EN +AI EH PR + +P Sbjct: 385 TIRAAKLSKADLVTGMVGEFDELQGFMGKEYAKVGGENDVVSEAIFEHYLPRFAGDILPK 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+ADKLD++ F+AI +P+GS+DPYALRR LGI+ I+++ K+ + + IE Sbjct: 445 TNAGVALSIADKLDSIAGFFAIGIQPTGSQDPYALRRQALGILSILMDRKVAVDIKVLIE 504 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + ++ FF++R+K D IR+D+++A+L + +++ + Sbjct: 505 HALDNYSELDFDKEEVVEQIMNFFNERVKNLFKDLGIRYDVVDAVLSSDINDVSDMHMRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN + + + L + R+ + E S +I L +AE +LY Sbjct: 565 LELNNWLEKDELVEMLTAFNRVSTLAQKAE------SDKIDESLLKEDAEIKLYNEFKQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + E + K+Y D S+ ++ FD V+V +D +++NRL+LL+ + + +L Sbjct: 619 KIKVNELLKDKKYGIALDEFASLRPVVDNLFDTVMVMDNDEAIKNNRLALLKQVYDTMLE 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|295424884|ref|ZP_06817599.1| glycyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] gi|295065450|gb|EFG56343.1| glycyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] Length = 689 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 211/733 (28%), Positives = 361/733 (49%), Gaps = 77/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L Sbjct: 1 MAKDYLFEIDTEEMPAHVVSRSVKQLADRTKKFLKENGLKFKDIKTYSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D ++ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGITT-DDIYFEELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ + +L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 120 QKEGKKASDILLG--MSDIIKDMTFPTKMRWDSND-----FEFVRPIHWLVSLYDSD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + +I G T GHRF + + + D Y+ L++ V++D + R++ I+N Sbjct: 170 --VIPVKILDITAGRKTEGHRFLG-DSVVLANADDYVEALKDQFVIVDAKERKDMIVNQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + L ++ EDK+LLEE+ LVE+ VF+GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 227 NDLVKKNNWKVKEDKNLLEEVTNLVEYPTVFVGSFDEKYLNIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDQNGKLINHFIAVRNGN-KDYLDNVISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL + ++ +V FH KIG+ E++ R+R++G +A+ + D +V Sbjct: 337 -----------PLSHFVDKMK--NVSFHDKIGSMAEKMKRVRLIGDYLAKRWNLDENVVK 383 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGENEEVAVAIKEHYMPTTAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +S+ADK+DT++ F+ PS S DPYALRR GI+RI+L K +P +Q Sbjct: 444 ETTVGSLLSVADKIDTILTFFGAGMIPSSSNDPYALRRNAYGIVRILLNQKWSLPFNQVL 503 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ED+ + LF DR+K YL + ++D+I+A+L + Sbjct: 504 PEIVELVDGKTPAKLPKTNEEDEQIALFIRDRIKQYLQKNNFKYDVIDAVLASSQQDPSE 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I+ K L A+ + + S RI IL + N++ E+ +E L+A Sbjct: 564 ILSAAKVLGLHHDDAEFKPVVESLTRIDNILKKAKFNNKQA--EVDENLFEDASENELFA 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I + + + + + I+ +FD ++ D++VR+NRL+ L + Sbjct: 622 GIQNLQ-------EIQNLADLYQGFVQLQPVIDRYFDTNMIMAKDKKVRNNRLAQLSQVS 674 Query: 690 NIILIVINVQKIV 702 + + ++ K+V Sbjct: 675 VLADRLGDLSKLV 687 >gi|254507339|ref|ZP_05119475.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus 16] gi|219549799|gb|EED26788.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus 16] Length = 688 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 201/703 (28%), Positives = 332/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGADLAHEGVKWYAAPRRLALKVSAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVEQADRLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIVVELAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGTADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDNNKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAK 504 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + D+ D+I+A+L +K Sbjct: 505 SQSLFGDKLTNANVADDVIEFMLGRFNAWYKDQGFSVDIIQAVLANRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLAGLREPVDAFFDNVMVMADDEALKK 664 >gi|315038509|ref|YP_004032077.1| glycyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1112] gi|312276642|gb|ADQ59282.1| glycyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1112] gi|327183705|gb|AEA32152.1| glycyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1118] Length = 687 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 203/732 (27%), Positives = 351/732 (47%), Gaps = 77/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFATPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D ++ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ + +L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 120 QKEGKKATDILLG--MSDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 --VVPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 227 NELVKENHWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDENGKLINHFIAVRNGN-KDYLDNVISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 337 -----------PLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLAKRWDLPENVVK 383 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 444 ETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEVL 503 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 DQ + F DR+K YL + ++D+++A+L + I Sbjct: 504 PEIINMLNGVTPAKLPKGDADQEIADFIRDRVKQYLQKNNFKYDIVDAVLASSQQDPSQI 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + S RI IL + K +++I+ +EK LYA Sbjct: 564 LAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKG---NVKIAESLFDDNSEKELYAG 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + + + + I+ +FD ++ D +V++NRL+ L + Sbjct: 621 VENLQ-------KVESLADLYQGFVQLQPVIDQYFDANMIMAKDEKVKNNRLAQLFAVSE 673 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 674 LADRLGDLSKLV 685 >gi|89256651|ref|YP_514013.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica LVS] gi|115315064|ref|YP_763787.1| glycine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|156502794|ref|YP_001428859.1| glycyl-tRNA synthetase, subunit beta [Francisella tularensis subsp. holarctica FTNF002-00] gi|254367963|ref|ZP_04983983.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica 257] gi|89144482|emb|CAJ79789.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica LVS] gi|115129963|gb|ABI83150.1| glycine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|134253773|gb|EBA52867.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. holarctica 257] gi|156253397|gb|ABU61903.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica FTNF002-00] Length = 694 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 367/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ I++ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANIISKNATDKDYYYNIELAKAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|149914420|ref|ZP_01902951.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. AzwK-3b] gi|149811939|gb|EDM71772.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. AzwK-3b] Length = 751 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 274/775 (35%), Positives = 403/775 (52%), Gaps = 100/775 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL + L E G+ Y + + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAADLRARMTDGLVEAGLTYSGAQAFATPRRLTLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EE GPR A +KAI+GFLR G+ T + +I+ D KKG V+ A + +P R Sbjct: 61 AASPTVTEELKGPRADAPEKAIEGFLRGAGV-TREELEIR-DEKKGQVFYAKIMRPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ ++ ++ PWPK+MRW + W+RPL+SILCIL + + +I+DL++ Sbjct: 119 EAIVAEVLDHVVRNFPWPKAMRWGAG-----SLRWVRPLQSILCILTDDAGEARIVDLEI 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N T GHRF V S + Y L+ V+LD + R + I +DA A A G Sbjct: 174 DGIKACNTTEGHRFMGGGQFAVSSFEDYEAGLKRDHVILDAQQRADHIWHDATSQAFAAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG D+++L LP E+++ ++K +QK F R Sbjct: 234 LEVVEDQGLLSEVAGLVEWPVVLMGQIDEEFLGLPAEVLQTSMKEHQKFFSVRNPATGRI 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+NI+++D GA I+ GN +V+AARL DA FW+ D Sbjct: 294 ERFITVANIESADHGATILAGNQKVLAARLSDAKFFWENDLRIAH--------------- 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +++ + +L +V F ++GTQ R+ RI L + IA + AD ++A ++KA Sbjct: 339 --AGMEEWIEQLS--NVTFQRQLGTQAARIRRIAALARDIAADVGADAGRAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A EEH +P GP + VP +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPDDVAAACEEHYRPLGPSDAVPVAPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ------------- 527 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IRIIL+ + L + Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRIILDGGFRLKLDRYIDAQLLRHKISL 514 Query: 528 ----------------FIEDQNLILF------FHDRLK---------------------- 543 E + +F DRLK Sbjct: 515 NHAKASDDEIDTLEEVLDEIADHGVFGAAFWAVMDRLKEKDGGPDTEEGSLLRTVGDLVP 574 Query: 544 -------LYLHDR--------DIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ HDR +RHD+I+A L D+L IV K L + + G Sbjct: 575 DLSTDLLVFFHDRLKVYLRDQGLRHDVIDACLMLDGGDDLALIVARAKALGDVLETEDGV 634 Query: 588 KFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KR IL+ E+K+ E S P++ + EK L++ ++ I ++ + Sbjct: 635 NLVQGFKRANNILSQAEEKDGVEYSFGADPKFAEVSEEKYLFSALAKAEDEIAKANAVED 694 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ PI+ FFD V VN D++ VR NRL+LL I++I L ++ K+ Sbjct: 695 FVGAMAAMAALRGPIDAFFDAVQVNTDNQVVRRNRLNLLGKIRDICLQAADLTKL 749 >gi|328675923|gb|AEB28598.1| Glycyl-tRNA synthetase beta chain [Francisella cf. novicida 3523] Length = 694 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 207/724 (28%), Positives = 362/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + AE L + LKE V + N + + +P RL +K L+ Sbjct: 6 KDFLFELGTEELPPKALRSLAESLLASVESQLKEAKVSFGNTKWFASPRRLSFIIKDLAE 65 Query: 62 HSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP + G + GF +S G++ + KGD + Sbjct: 66 AQEDIVVEKQGPLVSIAYKDGEPTQVGLGFAKSCGVKFDELESVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L+ I+ A++++P PK MRW S ++RP+ IL + + Sbjct: 124 SGQATVSLLQEIIIKALKQLPIPKMMRWGD-----SNVEFVRPVHWILALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKATNITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAKDI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +++ D DL+EE+ +VE+ + F+K +L +P+E + ++ +QKCF + Sbjct: 234 AKENNYQVILDDDLVEEVCAIVEYPNAMLCDFNKDFLRVPQEALISAMEEHQKCFALLDK 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 EGDLVAHFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L PL+Q + +L+ V F +K+G ++ RI +++A+L + D RA Sbjct: 338 -----LKTPLEQLLPKLEY--VTFQSKLGNMYQKAQRIANTAQQLAELGNFDSQQAYRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPKTDVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILKDTSVDISLEKIIDISLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI ++ ++ + Sbjct: 511 YKKVNNLEFSADIKSEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYHSVKDFAVRVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILSKNATDKVYCYDIELAKAVANEYELALAYSIEEVAPD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 +++ ++++ Y +LL + + I FF+ V+V +D +R+NRL+LL + + + + + Sbjct: 631 LEKYINNREYGYALELLTCLDKVISEFFENVMVIDEDVNIRENRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|84394118|ref|ZP_00992852.1| glycyl-tRNA synthetase beta subunit [Vibrio splendidus 12B01] gi|84375264|gb|EAP92177.1| glycyl-tRNA synthetase beta subunit [Vibrio splendidus 12B01] Length = 693 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 207/708 (29%), Positives = 334/708 (47%), Gaps = 68/708 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKNFLIELGTEELPPTALRSLAEAFASNFEAGLKTAELSHEGIKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP + G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAISVAFDAEGNATKAAQGWARGNGITVEQADRLKTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++++ I A+ +P PK+MRW + +IRP+K++ +L Sbjct: 119 QEVAGKPVQELVMDIAAKALAGLPIPKAMRWGNSD-----IQFIRPVKTLTVLL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +++++ + + GHRF + S D Y LEE V+ D + R+ IL D Sbjct: 169 DELVEGKILGVASARTIRGHRFMGEQEFTIDSADQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AKKAADAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEQEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 E L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSHEIGDAERSLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFFFNTDRK---- 343 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+A LD +F ++GT ++ RI L IA+ IDA Sbjct: 344 ----------------RPLIDRLAELDQA--IFQKQLGTIKDKTDRITELAGYIAEQIDA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA EN A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGENEQVALALYEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ Sbjct: 446 TLPSTGISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLT 504 Query: 527 QF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + ++I F R + + D D+I+A+L Sbjct: 505 DLIGKAKELLGDKLTNDNVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E+ EI L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAEALAAANKRVGNILA---KFDGELPAEIDLTLLQEDAEKALAENV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 669 >gi|255659369|ref|ZP_05404778.1| glycyl-tRNA synthetase, beta subunit [Mitsuokella multacida DSM 20544] gi|260848454|gb|EEX68461.1| glycyl-tRNA synthetase, beta subunit [Mitsuokella multacida DSM 20544] Length = 680 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 208/730 (28%), Positives = 338/730 (46%), Gaps = 80/730 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EE+PA + L KE + ++ +R TP R L ++GL Sbjct: 1 MAKDLLFEIGTEEVPAHVMPGTLAQLKENAEKAFKENRIAFKAVRTLGTPRRTALIVEGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G KA GF R + K A Sbjct: 61 AEKQEDVASENRGPSVKIAFDAEGNPTKAAQGFARGQHVDPKDLV------VKDGYVYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + +L+T++P + + +P +MRW F +IRP++ + + A+ Sbjct: 115 VHEEGQPTAKILETLLPELVCGLSFPNNMRWGNLD-----FKFIRPIRWFVALYGAD--- 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I +L + G + GHRF + ++ Y + EE +++D + R+ I Sbjct: 167 --VIPFELANVKSGRTSRGHRFLSQGDFEIADAKSYEKACEENFIIVDQDKRKQMIREQI 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A A G + +DLLEE++ LVE+ G F++KYL LP E + ++ +Q+ F Sbjct: 225 EAVAKANGGQAEITEDLLEEVLYLVEYPTALCGKFEEKYLQLPPEAVITPMRDHQRYFPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +T EG L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 285 KTAEGKLLPLFITVRNGG-KEYLETVQHGNERVLRARLADAQFFFDEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--- 409 K L++ +L VVF +GT E+ R+ L IA I AD Sbjct: 334 ----------KTLEEHREKLKT--VVFQQGLGTMYEKTERLEKLADFIADAIGADEKAHK 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +LSKADL T +V EF ELQG +G+EYA L E AI+EH KPR ++ P Sbjct: 382 HARRAAILSKADLVTGMVTEFTELQGIMGREYAKLDGECEKVAIAIDEHYKPRFAGDSQP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 VSLADK+DT++ +++ + P+GS+DP+ALRR LG++ +I+E K + LS + Sbjct: 442 QTTAGRIVSLADKIDTIVGTFSLGKIPTGSQDPFALRRQALGLVNMIIEAKYHLSLSAIV 501 Query: 530 E-----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 Q++ F RLK L IR+D+++A+L + D++ + Sbjct: 502 AKAMDLYGIEDEKARAKMQQDVADFIRLRLKNVL--ESIRYDVVDAVLA-DVDDIYAVAL 558 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 K + ++ +S + + R+ + E S E+S +AE+ L+A Sbjct: 559 RAKAVADYVASTDAAAGIQAFVRVANLAKKAE------SAEVSADLFQTDAERNLFAAYE 612 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + Y + L ++ PI+ FFD V+V D ++++NRL LL+ I ++ Sbjct: 613 KAS----AAVASESYAEAITALAALAAPIDTFFDDVMVMDKDEKIKNNRLGLLKSIDQLV 668 Query: 693 LIVINVQKIV 702 + + KIV Sbjct: 669 SRIADFTKIV 678 >gi|325956925|ref|YP_004292337.1| glycyl-tRNA synthetase subunit beta [Lactobacillus acidophilus 30SC] gi|325333490|gb|ADZ07398.1| glycyl-tRNA synthetase subunit beta [Lactobacillus acidophilus 30SC] Length = 687 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 203/732 (27%), Positives = 350/732 (47%), Gaps = 77/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFATPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D ++ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ + +L + I+ + +P MRW + F ++RP+ ++ + + Sbjct: 120 QKEGKKATDILLG--MSDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGGD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 --VVPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 227 NELVKENHWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDENGKLINHFIAVRNGN-KDYLDNVISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 337 -----------PLSHFVDRLK--NVSFHDKIGSVAEKMQRVRMIGDYLAKRWDLPENVVK 383 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +S+ADK+DT++ F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 444 ETTVGSLLSIADKIDTIVTFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEVL 503 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 DQ + F DR+K YL + ++D+++A+L + I Sbjct: 504 PEIINMLNGVTPAKLPKGDADQEIADFIRDRVKQYLQKNNFKYDIVDAVLASSQQDPSQI 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + S RI IL + K +++I+ +EK LYA Sbjct: 564 LAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKG---NVKIAESLFDDNSEKELYAG 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + + + + I+ +FD ++ D +V++NRL+ L + Sbjct: 621 VENLQ-------KVESLADLYQGFVQLQPVIDQYFDANMIMAKDEKVKNNRLAQLFAVNE 673 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 674 LADRLGDLSKLV 685 >gi|160873138|ref|YP_001552454.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS195] gi|189082273|sp|A9KU83|SYGB_SHEB9 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160858660|gb|ABX47194.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS195] gi|315265363|gb|ADT92216.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS678] Length = 689 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 212/720 (29%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAIKVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLAVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 293 DAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 341 ---------TLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANAAEEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPQLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 >gi|310643034|ref|YP_003947792.1| glycyl-tRNA synthetase beta subunit [Paenibacillus polymyxa SC2] gi|309247984|gb|ADO57551.1| Glycyl-tRNA synthetase beta subunit [Paenibacillus polymyxa SC2] Length = 691 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 204/734 (27%), Positives = 336/734 (45%), Gaps = 76/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A + L + L + Y + Y TP RL + +K + Sbjct: 1 MSKDLLFEIGLEEVPARFIPNAIQQLKERMTAWLDSSRIAYSAVEAYATPRRLAVLVKEV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF RS G+ Q G Y+ Sbjct: 61 AEKQEDINEEVKGPSRKIALDEAGNWSKAALGFARSQGV---DPEQFTFKELGGVEYIYA 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + DVL + + + +PK MRW++ F ++RP++ ++ + ++ Sbjct: 118 TKSSIGVPTADVLSEGLLHILHAMTFPKFMRWASYD-----FKFVRPIRWLVALFGSD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 I++L++ + GN+T GHRF + V+S Y+ L + V++D E R++ I+ Sbjct: 171 ---IVNLEIAGVQSGNVTRGHRFLGQEAV-VESPADYVEVLRKQHVIVDIEERQSLIVKQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + DLLEE++ LVE V G FD +L +P++++ +++ +Q+ F Sbjct: 227 IEALAAEKDWTIAVKDDLLEEVLYLVETPTVLFGGFDPAFLNIPKDVLITSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R G L F+ V N + I +GN +V+ ARL DA F++ DQ Sbjct: 287 VLDRTGKLLPYFVTVRNGGSQ-SLEVIAKGNEKVLRARLSDAKFFYEEDQK--------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 L+ + A + +VFH ++GT G++V RIR + +A+ + Sbjct: 337 -------------LEIKDALSKLESIVFHEELGTVGDKVRRIRRIADALAEKLRVSPDTQ 383 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA + K DL T++V EFPELQG +G++YA E A+ EH +PR E V Sbjct: 384 ESVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEEVARAVFEHYQPRFAGETV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ VS+ADK+DT+ ++I P+GS+DPYALRR GI++I+L+ K+ LS Sbjct: 444 PSTNAGAIVSIADKIDTITGCFSIGIIPTGSQDPYALRRQAAGIVQILLDRKLSATLSDV 503 Query: 529 IEDQNLIL-------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF R+K L + +R+D+++A+L D++ + Sbjct: 504 FNIALDVHSNFGNMKRSADEIRKELHEFFGLRVKKLLSE-TLRYDVVDAVLSAGYDDVAS 562 Query: 570 IVDLIKHL-NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +V+ L + + + S R+ + A + ++ + EK LY Sbjct: 563 VVNRGAALMTAVLTGDVFKATVESFNRVGNLAAKA------VHKSVNTGEFTEQGEKNLY 616 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++ Q L SI + FFD V+V +D VR+NRL+LL I Sbjct: 617 EAWYGAYESYCTALQEGDATQALALASSITPAVTAFFDSVMVMAEDDAVRNNRLALLAAI 676 Query: 689 KNIILIVINVQKIV 702 + + + K+V Sbjct: 677 DSELKRFADFSKLV 690 >gi|163733327|ref|ZP_02140770.1| glycyl-tRNA synthetase subunit beta [Roseobacter litoralis Och 149] gi|161393115|gb|EDQ17441.1| glycyl-tRNA synthetase subunit beta [Roseobacter litoralis Och 149] Length = 742 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 259/767 (33%), Positives = 380/767 (49%), Gaps = 93/767 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ AA+DL ++ L E G+ Y + + TP RL L L+G+ Sbjct: 1 MPDLLIELFSEEIPARMQRHAAQDLQKLVADGLVEAGLTYASAAAFSTPRRLTLTLEGVL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP +EER GP+ A KAI+GFLR G+ + +D KG V A + K R Sbjct: 61 AASPTTVEERKGPKADAPDKAIEGFLRGAGVTREALET--RDTPKGPVLFAKITKEGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW T W+RPL SILCIL +++A +++ L + Sbjct: 119 AQIVAEVLEKTIRNFPWPKSMRWGTG-----TLRWVRPLHSILCIL-SDEAGTQVVPLSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G+ T GHRF AP V D Y L+ A V+LDP R + I +DA A A G Sbjct: 173 DLITAGDSTQGHRFMAPDRFSVTGFDDYTAKLKRAFVVLDPAERADMIWHDATNQAFANG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED LL E+ GLVEW V MG D+ +L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDAGLLAEVAGLVEWPVVLMGRIDEAFLDLPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N +D GA I+ GN +V++ARL DA FW D AL+ Sbjct: 293 ERFVTVANRDTADNGATILAGNEKVLSARLADAKFFWDNDLRVAKAGMGEWLKALE---- 348 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 +V FH K+GTQ E V R+ L +++A ++ AD + A L+KA Sbjct: 349 ---------------NVTFHNKLGTQAELVDRVAALAREMAPMVGADPDEAEEAARLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ Y ++ + A +EH P GP + VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYLKAAGKSDAIAAAAQEHYAPLGPSDAVPTAPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------ 528 +K+D L FWAI+EKP+GSKDP+ALRRA LG++R+ L N + I L + Sbjct: 454 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVVRLALGNGVRIDLERLLKLLVAEQLIGI 513 Query: 529 ----IEDQNLILFFHDRLKLYLHDRDI-----RHDLIEAILRPENDNLLTIVDLIKHLNE 579 ED+ + +R + Y + + +E LR D+ I+ + L Sbjct: 514 ARIKFEDEFEPVPIEERGRYYQGVLEFWRALEEFESLETKLRTSPDDEPLIIQGARSLLT 573 Query: 580 FFS--------------------------------------------SAKGEKFLLSAKR 595 F + GE + KR Sbjct: 574 FLHDRLKVYLRDQGIRHDVIDACIAMPGNDDLTLLVKRAKALSDVVGTEDGENLIQGFKR 633 Query: 596 IFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 IL ++ + E S ++ + E+ L+ + I +M + + + Sbjct: 634 ANNILTQAQEADGVEYSYGADIKFAETDEERALFEALDTAEAIITPAMKSEDFATAMSAM 693 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ PI+ FF+ V VN D+ VR NRL+LL I I L V ++ +I Sbjct: 694 ATLRAPIDAFFEAVQVNSDNPTVRRNRLNLLSRITQICLSVADLTRI 740 >gi|323142367|ref|ZP_08077199.1| glycine--tRNA ligase, beta subunit [Phascolarctobacterium sp. YIT 12067] gi|322413251|gb|EFY04138.1| glycine--tRNA ligase, beta subunit [Phascolarctobacterium sp. YIT 12067] Length = 723 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 205/766 (26%), Positives = 339/766 (44%), Gaps = 108/766 (14%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EEIPA+ L + + E + ++ ++ Y TP R+ G++ Sbjct: 1 MEKLLFEIGTEEIPAKFMPAILAQLKDLTEKKMTELRIPFEAVKTYGTPRRMTFIASGVA 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E GP GA KA GF R G+ + + ++ D AV Sbjct: 61 EAQEDSTVEAKGPSAKIAFVSGAPSKAAIGFARGQGVD-VKELVVRDD-----YVYAVKH 114 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++D+L ++ + + +PK+MRW+ F ++RP++ ++ + ++ Sbjct: 115 LAGQPVKDLLPGLLTDILTSLNFPKNMRWADHE-----FKFVRPIRWLVALF-----GDE 164 Query: 175 IIDLDLKEIPCGNITYGHRFHAP------------------------------------- 197 +I +++ + G + GHRF P Sbjct: 165 VIPVEITGVKSGKFSRGHRFLRPSALDNAKAHESIGDAAKALFDTVKSKAKNAVASAAIG 224 Query: 198 --HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIG 255 +++ D Y + + + V++D RR I LA A G ++DLLEE+ Sbjct: 225 TIGAVEIPDADSYEKVMYDNYVMVDQNARRELIRQQVTDLAIAEGGHAEINEDLLEEVNY 284 Query: 256 LVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGG 315 LVEW G F++K+L LP+E I ++ +Q+ F +G L N FI V N + Sbjct: 285 LVEWPTALCGKFEEKFLALPKECIITPMREHQRYFPVLAEDGSLLNKFITVRNGG-KEHL 343 Query: 316 AAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDML 375 + GN RV+ ARL DA F+ D+ + L R+ +L Sbjct: 344 EIVAHGNERVLRARLSDAEFFFNEDRK--------------------QTLADRLEKLKT- 382 Query: 376 DVVFHAKIGTQGERVSRIRVLGKKIAQLIDA--DVALVDRAIVLSKADLCTEIVREFPEL 433 V F +G ++ R+ +A I+A D ++R +L K DL T +V EF EL Sbjct: 383 -VSFQEGLGNMNDKSKRLVQAVDMLAMAINAKVDKEKLERTALLCKCDLVTGMVIEFTEL 441 Query: 434 QGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAIN 493 QG +G+EYA L E I EH PR + +PT I +ADKLD + ++ Sbjct: 442 QGVMGREYAKLDGEAPEVALGIYEHYLPRFAGDELPTTDIGRLTGIADKLDNICATFSRG 501 Query: 494 EKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL----------------F 537 P+GS+DPYALRR LGII I+L+ + L + I +L F Sbjct: 502 LAPTGSQDPYALRRQALGIINILLDGNYHVSLYKVIAGALYLLNIPAEDTKKLVPQIAEF 561 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 RL+ L D+ IR+D+++A+L + ND+ +V K LN F +SA+ + +A R+ Sbjct: 562 MKQRLRNMLMDQGIRYDVVDAVLADQMNDDFTDLVARAKALNSFVASAEAPALIQAATRV 621 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 + E+++ I+PQ +EAE L+ + + Y + Sbjct: 622 ANLCKKIEEES-----AINPQLFAVEAEGALHNAAMAASKEVLVAATKYDYAAVMAEAVK 676 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + +PI FF+ V+V +D V++NRL+LL +K+I V ++ IV Sbjct: 677 LVDPINKFFEDVMVMDEDVRVKNNRLALLAAVKDITHAVGDLSVIV 722 >gi|126172269|ref|YP_001048418.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS155] gi|166227924|sp|A3CYI6|SYGB_SHEB5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|125995474|gb|ABN59549.1| Glycine--tRNA ligase [Shewanella baltica OS155] Length = 689 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 214/720 (29%), Positives = 343/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANLTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKNLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLTDLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 293 DAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 341 ---------TLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KPR + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPRFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLITKAQA 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 >gi|92118676|ref|YP_578405.1| glycyl-tRNA synthetase subunit beta [Nitrobacter hamburgensis X14] gi|91801570|gb|ABE63945.1| glycyl-tRNA synthetase beta chain [Nitrobacter hamburgensis X14] Length = 764 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 300/784 (38%), Positives = 417/784 (53%), Gaps = 105/784 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFATPRRLALTVHGVP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL+++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 VRQPDLKDERKGPKVGAPDAAVQGFLKATGLKSLDEAKIQRDPKKGDFYVALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL +PV ++ PWPK MRW + A +W+RPL SI+ E + ++ D+ Sbjct: 121 IDVLAEFLPVIVRTFPWPKQMRWGERSAKPGALTWVRPLHSIIATFGPETEEPDVVRFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP+ V+ + Y L EA V+LDP+ R++ IL DA LA A G Sbjct: 181 SGIAAGQTTRGHRFMAPNEFSVRRFEDYEAKLHEAKVVLDPQRRKDIILADAKELAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG--- 297 LVED+ LL+E+ GLVEW V MGSFD+++L +P E+IR TI+ NQKCFV R Sbjct: 241 FGLVEDQVLLDEVAGLVEWPVVLMGSFDEEFLSIPGEVIRATIRNNQKCFVVRQPHHPLE 300 Query: 298 ----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 LAN FIL +NI+ASDGG AIV GN RV+ ARL DA F++ D Sbjct: 301 GGGERLANRFILTANIEASDGGKAIVAGNERVIRARLSDAKFFYETD------------- 347 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-----DAD- 407 L L+ R+ + + +VFH K+GTQ ER++RI L +IA L+ A+ Sbjct: 348 -------LKTKLEYRLPKFE--KIVFHEKLGTQAERIARIERLAAEIAPLVVPTAQGAEK 398 Query: 408 ---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 VA RA L KADL TE+V EFPELQG +GK YA+ Q+E+ S A EEH KP+GP Sbjct: 399 EKLVAKAKRAAQLCKADLLTEVVGEFPELQGLMGKYYALAQDEDASVAAACEEHYKPQGP 458 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR---------- 514 + VPT+ +SI V+LADK+DTL+ FW I+EKP+GSKDPYALRRA LG IR Sbjct: 459 NDRVPTDPVSIAVALADKIDTLVGFWVIDEKPTGSKDPYALRRAALGAIRLLLENNLRLS 518 Query: 515 -------IILENKIDIPLSQFI------EDQNLILFFHDRLKLYLHD-----RDIRHDLI 556 I E ++ + L+ ++ F K + R D + Sbjct: 519 FRRLVGCAIPEIQVKVKLAPLTRSAIAAQEALYKADFDSSAKAVYREFRRKLRQDASDEV 578 Query: 557 EA----------------------ILRPENDNLLTIVDLIKHLN---------------- 578 +A + E +VD + L Sbjct: 579 DAAYEAQYEQASSDLLSFFADRLKVQLREQGARHDLVDAVFALEGQDDLLMIVRRVEALG 638 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F + G+ L KR ILAIEEK++ R L+ EK L A I Sbjct: 639 KFLDTDDGKNLLAGTKRASNILAIEEKRDKRTFDGAPDASLYRLDEEKTLAAAIDQVTAE 698 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ ++ + + + ++ FFD+V VN DD +R+NRL LL I+ V + Sbjct: 699 ASAAVANEDFAAAMAAMAKLRPAVDAFFDKVKVNDDDPTIRENRLKLLNEIRAATRTVAD 758 Query: 698 VQKI 701 KI Sbjct: 759 FSKI 762 >gi|323493788|ref|ZP_08098906.1| glycyl-tRNA synthetase subunit beta [Vibrio brasiliensis LMG 20546] gi|323311922|gb|EGA65068.1| glycyl-tRNA synthetase subunit beta [Vibrio brasiliensis LMG 20546] Length = 688 Score = 725 bits (1871), Expect = 0.0, Method: Composition-based stats. Identities = 210/723 (29%), Positives = 349/723 (48%), Gaps = 63/723 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK+ + +Q ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKDADLAHQGVKWYAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++K D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDAEGNATKAAQGWARGNGITVEQAERLKTD--KGEWLLCK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIVVDLAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITALSGYIAKQIDADVEKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 TRAGLLAKCDLMTSMVFEFTDTQGVMGMHYANHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLVDLIRE 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++I F R + + D D+I+A+L +K Sbjct: 505 AKVQFGTKLTNENVEADVIDFMLGRFRAWYQDAGFSIDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L ++ Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLSLLQEDAEKALAESVTVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ L + Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNLFLQIA 681 Query: 697 NVQ 699 ++ Sbjct: 682 DIS 684 >gi|254369520|ref|ZP_04985531.1| glycine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] gi|157122474|gb|EDO66609.1| glycine-tRNA ligase [Francisella tularensis subsp. holarctica FSC022] Length = 694 Score = 725 bits (1871), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 368/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--LKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V++ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVTSGNQKVMSARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ I++ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANIISKNATDKDYYYNIELAKAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|117924741|ref|YP_865358.1| glycine--tRNA ligase [Magnetococcus sp. MC-1] gi|254781855|sp|A0L7K9|SYGB_MAGSM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|117608497|gb|ABK43952.1| glycyl-tRNA synthetase beta chain [Magnetococcus sp. MC-1] Length = 700 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 215/730 (29%), Positives = 350/730 (47%), Gaps = 62/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F+ EI +EEIPARM A + + L+E G+ + + TP RL + + GL Sbjct: 1 MAEFMWEIGTEEIPARMLPGAITAMGELTRTALQEAGLGFAQVESQGTPRRLLVVVHGLH 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EER GP + G KA GF R G+ +++ KG L Sbjct: 61 DKQADVQEERRGPALQAAFDSDGNPTKAAQGFARGCGVDVDQLSRVET--PKGTYLSYTL 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + +VL I+ + +PWPK+MRWS S ++RP++S+ +L + Sbjct: 119 KQAGKGASEVLPGIMQQVFKALPWPKTMRWSDGES-----RFVRPVQSVTALLNGQQVAV 173 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + + GHRF + VQ Y + + + V+L E R I Sbjct: 174 EL----AENVRYTDAVSGHRFMGKGAVVVQDYASYQQAMADGKVMLKSEDRMATIRAGVL 229 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A++VG + D+ L+ E L EW +G FD++YL +P E++ +++ +QK F Sbjct: 230 AQAASVGGVVASDEGLVAENASLTEWPVALLGRFDERYLEIPPEVLTTSMRYHQKYFPVL 289 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L F++++N++ D + +G RV+ ARLEDA FW D+ Sbjct: 290 DAQGGLKPHFVVIANMETEDQTVLV-RGYQRVLKARLEDAAFFWAEDRKI---------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVD 412 L R+ L VV+ AK+G+ ++ R+ L IA + AL + Sbjct: 339 ----------RLTDRLPDLQA--VVWQAKLGSLFQKSQRMAHLASAIAARVAPQQAALAE 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYA-VLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A + SK DL T +V EFPELQG +G Y + ++ AI EH P G + +P + Sbjct: 387 KAGLYSKCDLVTGMVGEFPELQGIMGGYYLPRERAQDEVVALAIREHYMPAGAGDALPQS 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-ENKIDIPLSQFIE 530 VSLADKLDTL+ + + P+G+KDP+ LRRA LG+IR++L E + +PL Q E Sbjct: 447 LCGRIVSLADKLDTLVGCFGMGITPTGTKDPFGLRRAALGVIRLLLQEQGLRLPLRQLCE 506 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + Q ++ FF+ RL+ +L + +DLI+A+ D+L V Sbjct: 507 EAYRQYGEIGLEMGEAQTVQGVLAFFYGRLQAHLKAEGVDYDLIDAVQGLNLDDLWDAVS 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 +K L F A E + + KR+ IL+ E +++L + L AE+ L A ++ Sbjct: 567 RVKALVAFKQDAAYEALVAANKRMANILSKVEDSALDLTLGVDEAVLKASAEQGLAAAVA 626 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + RY + L ++ I+ FFD+V+V +D VR NRL LL + + Sbjct: 627 AVEDRVKTHSSNGRYAEALGELAALRGVIDTFFDEVMVMDEDDAVRHNRLRLLATVLGLF 686 Query: 693 LIVINVQKIV 702 V +V +V Sbjct: 687 RQVADVSCLV 696 >gi|251796251|ref|YP_003010982.1| glycyl-tRNA synthetase subunit beta [Paenibacillus sp. JDR-2] gi|247543877|gb|ACT00896.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus sp. JDR-2] Length = 693 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 205/731 (28%), Positives = 334/731 (45%), Gaps = 68/731 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PAR A L + + + Y ++ + TP RL LY+KG+ Sbjct: 1 MAKDLLLEIGLEEVPARFVRGAMNQLKEKAVKWFDDSRIPYDSVEVFATPRRLALYVKGV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E+ GP G KA GF RS G+ ++ + A Sbjct: 61 AEKQEDVSEQVKGPSRKIALDDQGNWSKAALGFARSQGVDPEQ--FFFQELAGVEYVYAN 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 VL + I + +PK+MRW + ++RP+K I+ + E Sbjct: 119 KSSVGTETASVLPEGLTNLITSMSFPKNMRWGSYE-----LKFVRPIKWIIALFGQE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 II +++ + GN++ GHRF + V S Y L + V++D E R I+ Sbjct: 171 --IIPIEITNVKSGNVSRGHRFLGEETV-VASPADYKERLRQQHVIVDVEEREQLIVAQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA E+ +DLLEE++ LVE+ V G+FD +L +P+E++ +++ +Q+ F Sbjct: 228 QELAKEKNWEIAIKEDLLEEVLFLVEYPNVLYGTFDPAFLNIPQEVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L F+ V N + + +GN +V+ ARL DA F++ DQ N Sbjct: 288 LNAEGQLQPFFVTVRNGDRT-SIENVAKGNEKVLRARLSDAKFFYEEDQKLAIN------ 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 +A+L+ ++V+H ++GT ++V RIR IA + AD Sbjct: 341 --------------DALAKLE--NIVYHEELGTVADKVRRIRATTDLIASRLGADTDTAA 384 Query: 413 RAIV---LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 A + K DL T++V EFPELQG +G++YA E+ + AI EH +PR + P Sbjct: 385 AASRAADICKFDLVTQMVYEFPELQGIMGEDYARKAGESEAVAKAINEHYQPRFAGDRAP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VSLADK+DT+ ++I P+GS+DPYALRR GI++IIL +D+ L+ Sbjct: 445 ASLEGAIVSLADKMDTIAGCFSIGIIPTGSQDPYALRRQASGIVQIILAQGLDLKLTDLF 504 Query: 530 EDQNLIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 E + FF R+K L ++ R+D+++A++ ++L V Sbjct: 505 EAALEVHEARGMKRGADEIRKDLNDFFALRVKNVLSEQANRYDVVDAVMATGFNDLRITV 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + +N+ S ++ +F L+ ++ + K S + AE LY Sbjct: 565 ERAALINDLSSGSERSEFKLTIDAFNRVCNLASKAE---SRTVDSALFEEAAEGALYEQW 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ L S+ + I +FD V+V D VR NRL+ L I + Sbjct: 622 QKAHPAVAAAIAEGDIASALANLSSLKQAINAYFDSVMVMAKDDAVRSNRLATLSLIADD 681 Query: 692 ILIVINVQKIV 702 I + + K+V Sbjct: 682 ITAIADFSKLV 692 >gi|114766654|ref|ZP_01445595.1| glycyl-tRNA synthetase beta subunit [Pelagibaca bermudensis HTCC2601] gi|114541117|gb|EAU44171.1| glycyl-tRNA synthetase beta subunit [Roseovarius sp. HTCC2601] Length = 741 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 268/765 (35%), Positives = 391/765 (51%), Gaps = 90/765 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL ++ L E G+ Y + TP RL L + GL Sbjct: 1 MPDLLIELFSEEIPARMQTRAAEDLKKLVTDGLVENGLTYAGAAAFSTPRRLTLTVSGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+V A +KAI+GFLR G+ C+ ++D KKG AV+ KP R Sbjct: 61 DASPATREERRGPKVDAPEKAIEGFLRGAGVSR-EQCEARED-KKGTFLYAVIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ AI+ PWPKSMRW W+RPL I+C+L +E A + ++ L++ Sbjct: 119 AEIVAEVLEAAIRNFPWPKSMRWGAG-----TLRWVRPLHRIMCVLSSE-AGDAVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF +V S Y L+ A V+L E R I +DA A A G Sbjct: 173 DGIEAGQTTEGHRFMGDGAFEVTSFADYETRLKRAKVILSAEERAETIWHDATNRAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG D ++L LP E+++ ++K +QK F + Sbjct: 233 LEVVEDRGLLAEVAGLVEWPVVLMGKIDAQFLELPPEVLQTSMKEHQKFFSVKNPATSRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ D GA I+ GN++V++ARL DA FW+ D N Sbjct: 293 EGFVTVANVETPDDGATILAGNNKVLSARLSDAKFFWENDLRVAKNEG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ RL +V FH K+G+Q +R+ RI L ++IA ++ AD AL ++A ++KA Sbjct: 341 ----LEAWTERLG--NVTFHNKLGSQRDRIERIAALAREIAPMVGADAALAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A EEH P GP + VPT +S+TV+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPTEVAVACEEHYSPLGPSDAVPTAPVSVTVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF-- 538 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + + Q L Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLVNGLRLHLDRLFDAQILRHKIEA 514 Query: 539 ---------HDRLKLYLHDRDIRHDLIEAIL-------------------RPENDNLLTI 570 D L + + ++A++ +D L Sbjct: 515 GVDSDQQELRDALLREIAQHGVFGSSVKAVIDEIEGDAAEWVKEVTNHRPDLSDDLLAFF 574 Query: 571 VDLIK---------------------------------HLNEFFSSAKGEKFLLSAKRIF 597 D +K L E + G + KR Sbjct: 575 HDRLKVHLKGEGVRHDVIDAVLAMPGNDDLAQVVRRATALGEVLGTEDGANLVQGFKRAN 634 Query: 598 QILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL E K+ E S P++ ++ EK L+A + I+ +++ + + + Sbjct: 635 NILTQAEDKDGVEYSFGADPKFAEVDEEKALFAALDAADAEIKPALEKEDFAAAMTAMAG 694 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FF+ V VN + VR NRL+LL I+ L V ++ ++ Sbjct: 695 LRAPIDAFFEAVQVNSESPVVRRNRLNLLSRIRTSCLQVADLNRL 739 >gi|1303829|dbj|BAA12485.1| YqfK [Bacillus subtilis] Length = 679 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 203/721 (28%), Positives = 349/721 (48%), Gaps = 63/721 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR +++ L L G LKE+ + + ++ + TP RL +++K Sbjct: 1 MSKQDLLLEIGLEEMPARFLNESMVQLGDKLTGWLKEKNITHGEVKLFNTPRRLAVFVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G + D IK+ KG Y+ Sbjct: 61 VAEKQDDIKEEAKGPAKKIALDADGNWTKAAIGFSKGQGAN-VEDLYIKE--VKGIEYVF 117 Query: 112 VLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + + + + +L + I + +PK+MRW +IRP+K I+ + + Sbjct: 118 VQKFQAGQETKSLLPE-LSGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + + G T GHRF H + ++S Y L+ V+ DP R+ I + Sbjct: 171 ----VIPFSITNVESGRTTQGHRFLG-HEVSIESPSAYEEQLKGQHVIADPSVRKQMIQS 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +A+ + D+DLL+E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 226 QLETMAAENNWSIPVDEDLLDEVNHLVEYPTALYGSFESEFLSIPEEVLVTTMKEHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + G L FI V N + + +GN +V+ ARL DA F+K DQ Sbjct: 286 PVKDKNGDLLPHFITVRNGNS-HAIENVARGNEKVLRARLSDASFFYKEDQKLN------ 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--- 407 +D + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 339 --------------IDANVKKLE--NIVFHEELGSLADKVRRVTSIAEKLAVRLQADEDT 382 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + V RA +SK DL T ++ EFPELQG +G++YA + E+ + A+ EH PR Sbjct: 383 LKHVKRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEDEAVAAAVNEHYMPRSAGGE 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P+ V++ADKLDT+ +F++I P+GS+DPY L R GI+ I+L+ I + Sbjct: 443 TPSTFTGAVVAMADKLDTIASFFSIGVIPTGSQDPYGLPRQASGIVAILLDRNWGISFEE 502 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++ L+ FF RLK L+ IRHD+I+A+L + + + L + Sbjct: 503 LLTFVQTDKENELLDFFTQRLKYVLNAEQIRHDVIDAVLESSELEPYSALHKAQVLEQKL 562 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + ++ + R+ I + +I P E E +L+ ++QE+ Sbjct: 563 GAPGFKETAEALGRVISISKKG------VRGDIQPDLFENEYEAKLFDAYQTAKENLQEN 616 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 K Y L ++ EPI+ +FD +V D+ ++ NRL+ + + + I N+ + Sbjct: 617 FSKKDYEAALASLAALKEPIDAYFDHTMVIADNESLKANRLAQMVSLADEIKSFANMNAL 676 Query: 702 V 702 + Sbjct: 677 I 677 >gi|164686272|ref|ZP_02210302.1| hypothetical protein CLOBAR_02710 [Clostridium bartlettii DSM 16795] gi|164601874|gb|EDQ95339.1| hypothetical protein CLOBAR_02710 [Clostridium bartlettii DSM 16795] Length = 688 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 231/728 (31%), Positives = 367/728 (50%), Gaps = 68/728 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLE+ EE+P+R + L LKE V ++++ +Y TP RL + + Sbjct: 1 MENYFLLEVGVEELPSRFVESTLTQIKENLEKSLKENRVEFKDIEKYGTPRRLTFVINQI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + EE GP G K GF++S GL +D K+ K + Sbjct: 61 SDKQSDLEEELKGPSKKISVDADGNFTKPALGFMKSKGLD-EADVYFKQ-VGKDEYLFGT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 L++ + +VLK IVP AI+ V +PK+MRW + + RP++ ++ +L Sbjct: 119 LKQEGKATSEVLKEIVPAAIKGVTFPKAMRWGGKN-----MKFARPIRWMVALL-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++L+ I N+T GHRF I+V S++ Y + L + V+LD R+ AI + A Sbjct: 169 DEVLPINLEGIVASNVTKGHRFLGRKEIEVFSIEDYFKQLSKNFVVLDQNVRKEAIKSQA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A ++G E+ + DLLEEI LVE+ F G F+K Y+ LP+E++ +K +Q+ F Sbjct: 229 EEVAKSLGGEVEIEDDLLEEITYLVEYPTAFYGEFNKDYVKLPKEVVTTPMKEHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ G L FI V N + GN +V+ ARL DAL F+ D Sbjct: 289 -SKYGKLLPYFIAVRNGD-KHAIDIVKAGNEKVLEARLADALFFYDEDIK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 KPL+ + L VVF AK+GT ++ RI L + I + +D L D Sbjct: 337 ----------KPLESFVENLKT--VVFQAKLGTVYDKTLRIEKLAQDIVETLDEKEILND 384 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L KADL T +V EF ELQG +G+EYA + EN + AI EH PR + +P Sbjct: 385 TLRAAKLCKADLVTNMVFEFTELQGVMGREYAKVGGENDAVAQAIFEHYLPRFAGDILPQ 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + +S+ADKLD++ F+AI KPSGS+DPYALRR LGI+ I+L+ K+DI L + + Sbjct: 445 TQEGVALSIADKLDSIAGFFAIGIKPSGSQDPYALRRQALGILSILLDKKLDINLEKLVG 504 Query: 531 DQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 D ++ FF +R+K D IR+D+I+A+L +++ I Sbjct: 505 DALNNYDYLTFDKAEVTSQIMDFFIERIKNLFKDLGIRYDVIDAVLSSNLNSISDIHTRA 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 LN++ + + L + R+ + E + L +AE +L A + Sbjct: 565 VELNKWLQKEELVEMLTAFNRVSTLAEKAETDI------VDEALLKEDAEVKLNAGFKEI 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + +K Y++ D SI ++ FD V++ D V+ NRL LL+ I + +L Sbjct: 619 KAQVEGFLANKEYNKALDAFASIKPLVDNLFDNVMIMDKDEAVKANRLGLLKQIYDTMLT 678 Query: 695 VINVQKIV 702 + ++ KIV Sbjct: 679 ICDLSKIV 686 >gi|217971228|ref|YP_002355979.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS223] gi|254781861|sp|B8E3Q5|SYGB_SHEB2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|217496363|gb|ACK44556.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS223] Length = 689 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 212/720 (29%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELSKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELAHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLAVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 293 DAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 341 ---------TLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAQA 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 >gi|307822586|ref|ZP_07652817.1| glycyl-tRNA synthetase, beta subunit [Methylobacter tundripaludum SV96] gi|307736190|gb|EFO07036.1| glycyl-tRNA synthetase, beta subunit [Methylobacter tundripaludum SV96] Length = 688 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 213/731 (29%), Positives = 337/731 (46%), Gaps = 83/731 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L E+ SEE+P + K + L + L + + + Y TP RL ++++ L+ Sbjct: 6 LLFELGSEELPPKTLLKLSNALLNNITQGLNAAELTFTGSKAYATPRRLAVFIENLATAQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+K E+ GP + G+ KA GF S G ++K D KG+ Sbjct: 66 PDKTVEKRGPAIQAAFAPDGSPSKAALGFAVSCGTSFDQLERLKTD--KGEWLSFTQAVK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E+++ I+ +I +P K MRW + + ++RP+ + + + +I Sbjct: 124 GQATENLIPDIIRQSIAGLPIAKRMRWGSFTT-----EFVRPVHWAVLLY-----GDSVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRL 235 D ++ + G T GHRFHAP I + + Y L ++ V+ D E R+ I + A + Sbjct: 174 DTEILGLKTGAATQGHRFHAPQKITLTKPEDYADVLYKQGRVIADLEQRKTLIRDAAQKA 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+AV + + DLLEEI L EW G+FD ++L LP E++ T++TNQK F + Sbjct: 234 AAAVHGQAHIEDDLLEEIAALNEWPVPITGTFDPRFLELPPEVLITTMQTNQKYFPVKNA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI SNI++++ + I QGN RVV RL DA FW +D+ Sbjct: 294 DGGLLANFITFSNIESTNPKS-IQQGNERVVTPRLSDAEFFWNQDRK------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 K L+ R+ L VVF +GT + R++ L K IA ++A++ L +RA Sbjct: 340 -------KTLEDRVESLS--SVVFQENLGTVFAKTKRVQNLAKFIAGHLNANIELAERAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL TE+V EF LQG +G+ YA+ NE AIEE P+ + Sbjct: 391 LLAKTDLMTEMVGEFGNLQGIMGRYYALADNEPEEVALAIEEQYFPKQSGSPTADSTTGQ 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +++A+K+DTL+ +A+ P+G KDPYALRRA LGI+R I+ENK++I + + E Sbjct: 451 VLAIAEKIDTLVGIFAVGLIPTGDKDPYALRRAALGILRTIIENKLNINIIELTEFAGAQ 510 Query: 533 ------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 +I F DRLK Y D+ D +A++ L + ++ + F Sbjct: 511 IKTTSDQSGTSDRVIDFIFDRLKGYCLDQGYTADEFDAVITVTPAEPLDFMQRLQAVKAF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + E + KRI IL E + S LL EK+L IQ Sbjct: 571 RQLPEAESLAAANKRIRNILKKSESQ-----PAASVGALLEPQEKQLLQAALQSADDIQP 625 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL----------QYIKN 690 + + Y + L + ++ FFD V+V DD L + Sbjct: 626 LLAQRNYQATLNRLAGLRNDVDAFFDHVMVMTDD----------LDLRANRLALLNLLSE 675 Query: 691 IILIVINVQKI 701 L ++ K+ Sbjct: 676 QFLTCADISKL 686 >gi|308069925|ref|YP_003871530.1| glycyl-tRNA synthetase subunit beta [Paenibacillus polymyxa E681] gi|305859204|gb|ADM70992.1| Glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) [Paenibacillus polymyxa E681] Length = 691 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 202/734 (27%), Positives = 336/734 (45%), Gaps = 76/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A + L + L + Y + Y TP RL + +K + Sbjct: 1 MSKDLLFEIGLEEVPARFIPNAIQQLKQRMTAWLDSSRIAYGAVEAYATPRRLAVLVKDV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF RS G+ Q G Y+ Sbjct: 61 AEKQEDINEEVKGPSRKIALDEAGNWSKAALGFARSQGV---DPEQFTFKELGGVEYIYA 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + DVL + + + +PK MRW++ F ++RP++ ++ + + Sbjct: 118 TKSSIGVPTADVLSEGLLHILHAMTFPKFMRWASYD-----FKFVRPIRWLIALFGGD-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 I++L++ + GN+T GHRF + V+S Y+ L + V+++ E R++ I+ Sbjct: 171 ---IVNLEIAGVQSGNVTRGHRFLGQDAV-VESPADYVEVLRKQHVIVNIEERQSLIVKQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + DLLEE++ LVE V G FD +L +P++++ +++ +Q+ F Sbjct: 227 IEALAAEKDWTIAVKDDLLEEVLYLVETPTVLFGGFDPAFLNIPKDVLITSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R G L F+ V N + I +GN +V+ ARL DA F++ DQ Sbjct: 287 VLDRTGELLPYFVTVRNGGSQ-SLEVIAKGNEKVLRARLSDAKFFYEEDQK--------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL- 410 L+ + A + +VFH ++GT G++V RIR + +A+ + Sbjct: 337 -------------LEIKDALSKLESIVFHEELGTVGDKVRRIRRIADALAEKLRVSPDTQ 383 Query: 411 --VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA + K DL T++V EFPELQG +G++YA E A+ EH +PR E V Sbjct: 384 ESVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEREEVARAVFEHYQPRFAGETV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ VS+ADK+DT+ ++I P+GS+DPYALRR GI++I+L+ K+ LS Sbjct: 444 PSTNAGAIVSIADKIDTITGCFSIGIIPTGSQDPYALRRQAAGIVQILLDRKLSATLSDV 503 Query: 529 IEDQNLIL-------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF R+K L + +R+D+++A+L D++ + Sbjct: 504 FNIALEVHGNLGNMKRSADEIRKELHEFFGLRVKKLLSE-TLRYDVVDAVLAAGYDDVAS 562 Query: 570 IVDLIKHLNEFFSSAK-GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 +V+ L + + + + S R+ + A + ++ + EK LY Sbjct: 563 VVNRGTALMTAIQTGEVFKATVESFNRVGNLAAKA------VHKSVNTSEFTEQGEKTLY 616 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++ + L SI + FFD V+V +D VR+NRL+LL I Sbjct: 617 EAWHSAYESYSVALQEGDATRALALASSITPAVTAFFDSVMVMAEDDAVRNNRLALLAAI 676 Query: 689 KNIILIVINVQKIV 702 + + + K+V Sbjct: 677 DSELKRFADFSKLV 690 >gi|187931538|ref|YP_001891522.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|187712447|gb|ACD30744.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. mediasiatica FSC147] Length = 694 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 367/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ ++ GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVISGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIVVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELAKAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRENRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|83594287|ref|YP_428039.1| glycine--tRNA ligase [Rhodospirillum rubrum ATCC 11170] gi|123525869|sp|Q2RQ43|SYGB_RHORT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|83577201|gb|ABC23752.1| Glycine--tRNA ligase [Rhodospirillum rubrum ATCC 11170] Length = 721 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 261/736 (35%), Positives = 387/736 (52%), Gaps = 76/736 (10%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +A EDL+ ++ L E G+ + +R + TP RL L + GL P+ EER G Sbjct: 13 IPARMQVRAIEDLTKLVGTGLAEAGLSHGGLRGFVTPRRLTLVVDGLPVAQPDVHEERRG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P+ A KAI GFL S GL T + ++ P KG AV+ + R +VL I+ A+ Sbjct: 73 PKADAPDKAIAGFLGSLGL-TRDQLETRETP-KGPFLFAVIERKGRPTAEVLPEIIYRAL 130 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI-IDLDLKEIPCG----- 186 + WPKSMRW+ F+W+RPL SIL + + I + + L+ +P G Sbjct: 131 TALSWPKSMRWARGQ-----FTWVRPLHSILAVFEGAPLRGAIGLGVSLEGLPVGFIADP 185 Query: 187 -------------NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 T GHRF AP P V+ Y L +A VL+D E R+ I A Sbjct: 186 AAAPEGTPLLAFGATTRGHRFLAPEPFPVRDFADYAARLRQAHVLIDREERKRVIAERAA 245 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA+ GL + +D LLEEI GLVEW MG DK ++ +P E++ +++++QK F Sbjct: 246 ALAAGEGLRVKDDPALLEEITGLVEWPVPLMGHIDKAFMDVPAEVLTTSMRSHQKYFSVE 305 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L F++VSN+ A+D A +V GN RV+ ARL DA FW +D+ Sbjct: 306 NADGTLNARFVVVSNMDATDSSARVVAGNERVLRARLSDAKFFWDQDRK----------- 354 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVD 412 PL ++ L VFHAK+G+ ++V+R+R +A + AD +LVD Sbjct: 355 ---------APLAGKVEALGAR--VFHAKLGSDLDKVTRVRAGAAWLAARVPGADASLVD 403 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +L+KADL T +V EFPELQG +G+ YA+ E + AI +H P GP + PT Sbjct: 404 RAALLAKADLTTGMVGEFPELQGLMGRYYALHDGEPPAVAQAIRDHYSPVGPGDACPTAA 463 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 S+ V+LADK+DTL FW I+EKP+GSKDP+ALRRA LG+IR+I+EN + +PL + + Sbjct: 464 TSVCVALADKIDTLAGFWLIDEKPTGSKDPFALRRAALGVIRLIVENSLRLPLREVLGSA 523 Query: 533 -------------------------NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDN 566 +LI F +RLK+ ++ +RHDLIEA+ D+ Sbjct: 524 ISTYGDRMLAQCGKADGTSSDVIEHDLIAFIAERLKVQQREKGVRHDLIEAVFSQGGEDD 583 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEK 625 L+ ++ + L +F +S +G L + +R I+ IEEKK+ + +S + + E+ Sbjct: 584 LVRLLARVSALADFLASEEGTNLLSAYRRATNIVRIEEKKDGKPVSGDPDNALFEQDEER 643 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L + + S+ + + L + P++ FFD+V VN D +R+NRL LL Sbjct: 644 ALSLALDTLLGEVSPSLAAEDHAAAMRALARLRGPVDAFFDRVTVNADTPALRNNRLRLL 703 Query: 686 QYIKNIILIVINVQKI 701 I + + + KI Sbjct: 704 ARIGTAMATLADFSKI 719 >gi|161507648|ref|YP_001577602.1| glycyl-tRNA synthetase subunit beta [Lactobacillus helveticus DPC 4571] gi|172048290|sp|A8YVM4|SYGB_LACH4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160348637|gb|ABX27311.1| Glycyl-tRNA synthetase beta chain [Lactobacillus helveticus DPC 4571] gi|328465880|gb|EGF37063.1| glycyl-tRNA synthetase subunit beta [Lactobacillus helveticus MTCC 5463] Length = 687 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 203/732 (27%), Positives = 348/732 (47%), Gaps = 77/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EEIPA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEIPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D ++ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKITQDADGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ + +L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 120 QKEGKKASDILLG--MSDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 --VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 227 NELVKKNHWQIKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L N FI V N D I+ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDENGKLINHFIAVRNGN-KDYLDNIISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL + RL +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 337 -----------PLSHFVDRLK--NVSFHDKIGSMAEKIQRVRMIGDYLAKRWDLPENVVT 383 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 444 ETTVGSLLSVADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEVL 503 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 +Q + F DR+K YL ++D+++A+L + I Sbjct: 504 PEIINMLGGVTPAKLPKGDSEQEIADFIRDRVKQYLQKNKFKYDIVDAVLASSQQDPSQI 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + S RI IL + + +++ + +E LYA Sbjct: 564 LAAANVLQLHHDDEEFKPVVESLTRINNILKKAKFNGK---VDVDESLFVDNSETELYA- 619 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +Q + + + + I+ +F+ ++ D V++NRL+ L + Sbjct: 620 ------RVQNLQNIESLADLYQGFVHLQPVIDQYFEANMIMDKDENVKNNRLAQLYAVSE 673 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 674 LADRLGDLSKLV 685 >gi|71066328|ref|YP_265055.1| glycyl-tRNA synthetase subunit beta [Psychrobacter arcticus 273-4] gi|71039313|gb|AAZ19621.1| glycyl-tRNA synthetase, beta subunit [Psychrobacter arcticus 273-4] Length = 697 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 345/733 (47%), Gaps = 70/733 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L E+ EE+P + + L I + + +++ + P RL + +KG+S Sbjct: 1 MSTILFELGCEELPPKSLKTLRDALQQSFIIQSAAANITFDSIKAFVAPRRLAIQIKGIS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ EE+ GP + G +A GF + G++ I D KGD V Sbjct: 61 AKQPDRTEEKRGPAIKAAFDAEGNPTRAAMGFAKGLGIEASELTTINTD--KGDYVGYVQ 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L TI A+ +P K MR S ++RP++ + + + Sbjct: 119 TVQGQATTELLPTIFQTALDNLPIAKRMRSGA-----SRNEFVRPVQWAVLM-----QDD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ ++ GN T GHRFH+P + + Y + L+ V+ D + R+ I N Sbjct: 169 AVINATIQGHQTGNQTRGHRFHSPDYHTIAHANDYEQLLDGLKVVADFDKRQMLIKNQVK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V + + + LL+E+ LV++ SF+ ++L +P+E + T++ +QK F Sbjct: 229 ALADEVNSDAIVPQSLLDEVTALVDFPIALRASFEPRFLQVPQEALISTMQADQKYFCLT 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L FI ++NI++ D I++GN +VV RL DA F+ +DQ Sbjct: 289 DKEGKLQPYFIFITNIESKDP-KQIIEGNEKVVRPRLADAEFFFLQDQK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD- 412 +PL L + VF K+GT E+ RI L IA L+ +D Sbjct: 337 ---------QPLFVLTENLK--NRVFQDKLGTIWEKSERIAKLAAFIATLMQQQGQEIDI 385 Query: 413 ----RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA +LSKADL + +V E+PELQG G YA L NE + ++EE P+ + + Sbjct: 386 NETVRAGILSKADLASSLVGEYPELQGIAGTYYARLNNEPEAVAASLEEQYLPKFSGDVL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + I ++LAD+LDTL+ +AI + P+GSKDP++LRR+ +GI+RI++E ++ I L Sbjct: 446 PKTAVGICLALADRLDTLVGIFAIGQAPTGSKDPFSLRRSAIGILRILIEKQLPINLVAL 505 Query: 529 IEDQ--------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 +E ++ F + R + ++ + D I+A+ L Sbjct: 506 VEQAIKGYSTSDGSKIAKMGDTFTQVMAFLNSRYRAMYTEQGVSVDTIQAVQAINPHMPL 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ + F + S KR+ ILA K ++ E++ L E EK LY Sbjct: 566 DFDQRIRAVQTFSELPQASMLADSNKRVANILA---KSEGAVANEVNASLLTEEVEKSLY 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + +D Y Q+ L S+ P+ FF V+VN +D ++ NRL+LL+ + Sbjct: 623 QTVQQAQLDVMPLLDTANYTQVLQTLVSLDAPLTQFFADVMVNSEDAALKANRLALLKQV 682 Query: 689 KNIILIVINVQKI 701 + + L V ++ ++ Sbjct: 683 RALFLTVADISEL 695 >gi|161830292|ref|YP_001597730.1| glycyl-tRNA synthetase subunit beta [Coxiella burnetii RSA 331] gi|189082266|sp|A9NB99|SYGB_COXBR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|161762159|gb|ABX77801.1| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 331] Length = 689 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 226/720 (31%), Positives = 363/720 (50%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 123 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR I + + Sbjct: 173 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 233 AASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 292 KNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 337 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 389 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 449 PCVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 508 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L D+ L IK + Sbjct: 509 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 569 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 627 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 686 >gi|304412716|ref|ZP_07394319.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS183] gi|307305819|ref|ZP_07585565.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica BA175] gi|304348926|gb|EFM13341.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS183] gi|306911312|gb|EFN41738.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica BA175] Length = 689 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 212/720 (29%), Positives = 341/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELAKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGLKQFELVHADHYLADLKEKGKVIADYESRKALIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGTADIEDSLLEEVASLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 293 DAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 341 ---------TLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAQA 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINASLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 >gi|152998563|ref|YP_001364244.1| glycyl-tRNA synthetase subunit beta [Shewanella baltica OS185] gi|166227925|sp|A6WH92|SYGB_SHEB8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|151363181|gb|ABS06181.1| glycyl-tRNA synthetase, beta subunit [Shewanella baltica OS185] Length = 689 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 212/720 (29%), Positives = 342/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + + + Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKSLRKLAESFLANFTEELTKADLAFSSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K+ E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKVVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVEQAERLVTD--KGEWLVHNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGNNKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ DHY+ DL E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARTVRGHRFMGQASFELAHADHYLADLKEKGKVIADYEVRKTLIKADAEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 233 AAAKIGGKADIEDSLLEEVASLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 293 EAGKLLPNFIFVTNIESKDP-AQIISGNEKVVRPRLADAEFFFNTDKKH----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 341 ---------TLESRLPSLET--VLFQQQLGTLKDKVNRISALAAFIAEQTGANAVDAARA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VP+ +S Sbjct: 390 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVAVAMEEQYKPKFSGDTVPSAGVS 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 450 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVDLIAKAQA 509 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 510 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIGVDVILAVLARRPTRPADFDSRINAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K + I+ L AE+ L A +++ + Sbjct: 570 FRSLEASSALAAANKRVSNILA---KVEGALPTTINANLLTEAAEQALAAKLNELQPLLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL + E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 627 PLFANADYQQALTLLAGLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 686 >gi|30581049|sp|P45651|SYGB_COXBU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 689 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 226/720 (31%), Positives = 363/720 (50%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 123 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR I + + Sbjct: 173 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 233 AASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLKLPPEVLITTMKVHQRTFPIKN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 292 KNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 337 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 389 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 449 PCVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 508 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L D+ L IK + Sbjct: 509 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 569 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 627 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 686 >gi|328952742|ref|YP_004370076.1| Glycyl-tRNA synthetase beta subunit [Desulfobacca acetoxidans DSM 11109] gi|328453066|gb|AEB08895.1| Glycyl-tRNA synthetase beta subunit [Desulfobacca acetoxidans DSM 11109] Length = 690 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 210/728 (28%), Positives = 349/728 (47%), Gaps = 68/728 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D L+EI +EEIPAR E++ + L L++E + + ++ TP RL L + ++ Sbjct: 3 ADLLIEIGTEEIPARFIPPVLEEMKVSLAKRLEQERLAVEVVKTMGTPRRLTLIAQKVAT 62 Query: 62 HSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 E E +GP G +A GF R+ G++ ++ D +G Sbjct: 63 QQAESTAEIIGPPQAVAFGADGQPTQAAFGFARAQGVEVKDLIVVQTD--RGPYLAVKKH 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R + L I+P I + +PKSMRW + ++ RPL I+ + E+ Sbjct: 121 AAGRPAHERLSEILPEWILGLSFPKSMRWGSL-----TVTFARPLHWIVALF-----GEE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDH--YIRDLEEAMVLLDPECRRNAILNDA 232 +I + +I G +TYGHRF AP I + + D YI L +A VL+ PE RR +L Sbjct: 171 VIPFAVGDITSGRLTYGHRFQAPQAITLATADAEAYINSLRQAQVLVAPEERRAKLLEQL 230 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A++V ++V + +LL+E LVE+ + +G+F++K+L LP++++ +++ +Q+ F Sbjct: 231 QQAAASVQGQIVPNPELLQENTFLVEYPNLTLGNFEEKFLALPDDVLITSMREHQRYFSL 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R G L FI V+N A + + QG+ RV+ ARL DA+ F++ D+ Sbjct: 291 RDGSGKLMPHFIAVNNTLARNP-DVVRQGHERVLRARLSDAMFFFQEDRKVN-------- 341 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 LD + L VV+H+ +GT ++++R R L + +A+ + D V Sbjct: 342 ------------LDDWVEAL--RGVVYHSLLGTSYDKMARFRSLARYLAERLLPDSITPV 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L KADL + +V EFP LQG +G+EYA+L E DAI H PR + +P N Sbjct: 388 HRAATLCKADLVSGMVGEFPSLQGIMGREYALLAGEAPEVADAIWTHYLPRHAGDQLPDN 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 + V +AD+LD++ + + P+G+ DPY LRR L II I+ E K + LS Sbjct: 448 PVGAIVGMADRLDSICGCFGVGLIPTGAADPYGLRRQALAIISILGEKKFYLDLSSAVSY 507 Query: 529 --------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +I FF RL L + +++EA+L +++ ++ + Sbjct: 508 SLSLLQDKLTLPVDQTHAEIIEFFRTRLHHLLTGENFSVEVVEAVLTTSFTDIVEAMEKV 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L E ++ KR+ I + I P+ AE+ L+ Sbjct: 568 RALEEVRRGLDFPSLAVAFKRVINISRQA------PAAVIKPELFDNTAEQELFQATIAM 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++ + Y ++ L ++ P++ FFD+VLV DD +R NRL+LL I L Sbjct: 622 EEVVARALPARDYAEVFKALAALKTPVDRFFDEVLVMTDDLNIRANRLALLVRISQTFLK 681 Query: 695 VINVQKIV 702 V + +I Sbjct: 682 VADFSRIA 689 >gi|215919288|ref|NP_820891.2| glycyl-tRNA synthetase subunit beta [Coxiella burnetii RSA 493] gi|206584172|gb|AAO91405.2| glycyl-tRNA synthetase beta chain [Coxiella burnetii RSA 493] Length = 692 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 226/720 (31%), Positives = 363/720 (50%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 126 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR I + + Sbjct: 176 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQK 235 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 236 AASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLKLPPEVLITTMKVHQRTFPIKN 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 295 KNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 340 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 392 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 452 PCVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 511 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L D+ L IK + Sbjct: 512 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPDDPLDFDRRIKAVQH 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 572 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 630 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 689 >gi|164685872|ref|ZP_01947493.2| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165922515|ref|ZP_02219686.1| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 334] gi|164601389|gb|EAX31882.2| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165916720|gb|EDR35324.1| glycyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 334] Length = 689 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 225/720 (31%), Positives = 362/720 (50%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 123 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR I + + Sbjct: 173 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 233 AASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 292 KNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 337 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 389 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 449 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 508 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 509 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 569 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 627 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 686 >gi|261856636|ref|YP_003263919.1| glycyl-tRNA synthetase subunit beta [Halothiobacillus neapolitanus c2] gi|261837105|gb|ACX96872.1| glycyl-tRNA synthetase, beta subunit [Halothiobacillus neapolitanus c2] Length = 692 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 216/724 (29%), Positives = 355/724 (49%), Gaps = 62/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + + + L+ L+ L+E G+ + + Y P RL + ++ ++ Sbjct: 5 ADFLFELGTEELPPKALLRLSNALTEELLTALREAGLAFGTHQSYAAPRRLAVLIREVAA 64 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +PE+ ER GP + G +A++GF RS G+ + +I+ D KG + Sbjct: 65 STPEQAVERKGPALASAFDAEGKPSRALEGFARSCGVTVDALEKIETD--KGTWLVHRHT 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P + +++ + A+ K+P PK MRW + +IRP+ + + Sbjct: 123 QPGKTAAEIIPVAIARALDKLPTPKRMRWGSHE-----VEFIRPVHWAVAL-----HGNT 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +ID ++ + G T+GHRFH P I ++S Y LE+ VL D RR+ I Sbjct: 173 VIDTEILGVKAGKETFGHRFHHPAAITIESPASYADVLEKKGFVLADFAARRSKIQAQIE 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +G D DLL+E+ LVEW G F++ +L +P E + T++ NQK F Sbjct: 233 AIARDLGGTARVDDDLLDEVTALVEWPVAVAGKFEESFLQVPHEALISTMQGNQKYFPLV 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + L FI ++NI + + AA+ +GN RV+ R DAL FW D+ + Sbjct: 293 DVQNRLLPWFITIANIDSKNP-AAVREGNERVIRPRFSDALFFWNEDRKH---------- 341 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L+ + L V+F ++G+ ++ R+ L + IA I DVA R Sbjct: 342 ----------TLESHLESLKT--VIFQQRMGSLFDKTIRVERLAEFIAAQIGGDVAQTRR 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L K DL + +V EFPELQG +G+ A E + A +++ PR +++P + + Sbjct: 390 AARLCKCDLQSHMVGEFPELQGIMGRYLAANDGEPAAVAQAQDDYYLPRRAGDSLPGDAV 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 S V+LAD+LDTL+ +AI + P+G+KDP+ALRRA LG++RII+E ++D+ L +E Sbjct: 450 SQAVALADRLDTLMGIFAIGQAPTGAKDPFALRRAALGVLRIIVEQRLDLDLKSLLEQAA 509 Query: 532 --------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 Q + F +R Y DR IR D+ A+ + L + + Sbjct: 510 KGLVSVIPEAPGHVQAVFEFITERQYRYSLDRAIRADVFAAVAAVGTTHPLDFEQRMVAV 569 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 NEF + + E KRI IL +K+ + + I L AEK L+ ++ Sbjct: 570 NEFLNLPESEPLTAGNKRIQNIL---KKQEQPVDGLIQADLLQESAEKALFEAVTKMTPR 626 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 I + + Y L + PI+ FFD+V+V DD +R NRL+LLQ + L + + Sbjct: 627 ITAATAARAYTDALTELAQLRAPIDRFFDEVMVMADDAAIRHNRLALLQQTGALFLSIAD 686 Query: 698 VQKI 701 + ++ Sbjct: 687 LAQL 690 >gi|212217707|ref|YP_002304494.1| glycyl-tRNA synthetase subunit beta [Coxiella burnetii CbuK_Q154] gi|212011969|gb|ACJ19349.1| glycyl-tRNA synthetase beta chain [Coxiella burnetii CbuK_Q154] Length = 692 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 225/720 (31%), Positives = 362/720 (50%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 126 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR I + + Sbjct: 176 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQK 235 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 236 AASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 295 KNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 340 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 392 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 452 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 511 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 512 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 572 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 630 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 689 >gi|260101318|ref|ZP_05751555.1| glycyl-tRNA synthetase [Lactobacillus helveticus DSM 20075] gi|260084903|gb|EEW69023.1| glycyl-tRNA synthetase [Lactobacillus helveticus DSM 20075] Length = 687 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 202/732 (27%), Positives = 347/732 (47%), Gaps = 77/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EEIPA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEIPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D ++ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKITQDADGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ + +L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 120 QKEGKKASDILLG--MSDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 --VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 227 NELVKKNHWQIKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L N FI V N D I+ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDENGKLINHFIAVRNGN-KDYLDNIISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL + L +V FH KIG+ E++ R+R++G +A+ D +V Sbjct: 337 -----------PLSHFVDPLK--NVSFHDKIGSMAEKIQRVRMIGDYLAKRWDLPENVVT 383 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 444 ETTVGSLLSVADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEVL 503 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 +Q + F DR+K YL ++D+++A+L + I Sbjct: 504 PEIINMLGGVTPAKLPKGDSEQEIADFIRDRVKQYLQKNKFKYDIVDAVLASSQQDPSQI 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + S RI IL + + +++ + +E LYA Sbjct: 564 LAAANVLQPHHDDEEFKPVVESLTRINNILKKAKFNGK---VDVDESLFVDNSETELYA- 619 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +Q + + + + I+ +F+ ++ D V++NRL+ L + Sbjct: 620 ------RVQNLQNIESLADLYQGFVHLQPVIDQYFEANMIMDKDENVKNNRLAQLYAVSE 673 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 674 LADRLGDLSKLV 685 >gi|194017648|ref|ZP_03056258.1| glycyl-tRNA synthetase, beta subunit [Bacillus pumilus ATCC 7061] gi|194010548|gb|EDW20120.1| glycyl-tRNA synthetase, beta subunit [Bacillus pumilus ATCC 7061] Length = 681 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 208/719 (28%), Positives = 355/719 (49%), Gaps = 63/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR ++ + L + +E+ + ++++ + +P RL + +KG++ Sbjct: 5 DVLLEIGLEEMPARFMPESTKQLGEKVKVWFEEQNISFEDVALFNSPRRLAVLVKGVAEK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + EE GP G KA +GF R G T D K+ KG Y+ V + Sbjct: 65 QEDIKEEAKGPAKKIAQDAEGNWTKAAEGFARGQGAST-DDLYFKE--IKGVDYVHVQKF 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + ++D+L + + +PK+MRW + +IRP+K I+C+ E+ Sbjct: 122 QEGKQVKDLLPA-LGEIAASLSFPKNMRWGSKD-----LRYIRPIKWIVCLF-----GEE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + + G T GHRF + Y + L + V+ D + R+ +I + Sbjct: 171 IVPAHIAGVKSGRETRGHRFLGKAA-TIDLPASYEQTLRDQFVIADSDKRKQSITEQLNA 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L+ G + D +LLEE+ LVE+ V GSF++++L LPEE++ T+K +Q+ F + Sbjct: 230 LSLEKGWVIPVDPELLEEVNNLVEYPTVLSGSFEEEFLALPEEVLVTTMKEHQRYFPVKN 289 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V N + + + +GN +V+ ARL DA F+K D+ + Sbjct: 290 EQGELLPHFITVRNGNS-EALENVARGNEKVLRARLSDAAFFYKEDEKLV---------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALV 411 ++ + +LD VVFH K+GT G+++ R+ + ++A + AD V Sbjct: 339 ----------IEDNIKKLD--KVVFHEKLGTIGDKLKRVTDIATRLAAHVGADDETTERV 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +SK DL T++V EFPELQG +G++YA E+ +I EH PR + P+ Sbjct: 387 ARAASISKFDLVTQMVYEFPELQGIMGEKYAKALGEHEEVAKSINEHYMPRFAGDEAPST 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 I V++ADKLD++ +F++I+ P+GS+DPY LRR GI++I+L+ +I + + Sbjct: 447 LIGAIVAVADKLDSICSFFSIDVIPTGSQDPYGLRRQASGIVQILLDRHWNISFKELLAL 506 Query: 532 QNL--------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + I F RLK L IRHD+++A+L EN +V L E Sbjct: 507 AQVEAAHETALIEFLTHRLKYVLQAEHIRHDVVDAVLDVENIEPYAVVKKAAVLEESVKQ 566 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 ++ + R+ I E EI P+ E E++LY T ++E + Sbjct: 567 ESFKETAEALGRVISISKKGE------DAEIQPELFENEHEQKLYEAYQQVETAVKEHVA 620 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +Y + L ++ PI +FD +V+ DD +++ NRL+ + + +I N+ ++ Sbjct: 621 AGQYSAALEALDTLKTPIVHYFDHTMVHADDEKLKRNRLAQMVKLAKVIQSFANMNNLI 679 >gi|134301720|ref|YP_001121688.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|134049497|gb|ABO46568.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis WY96-3418] Length = 694 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 366/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELAKAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R+NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISKFFENVMVIDEDIKIRENRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|327535692|gb|AEA94526.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis OG1RF] Length = 694 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 349/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L DK+LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDKELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|284049109|ref|YP_003399448.1| glycyl-tRNA synthetase, beta subunit [Acidaminococcus fermentans DSM 20731] gi|283953330|gb|ADB48133.1| glycyl-tRNA synthetase, beta subunit [Acidaminococcus fermentans DSM 20731] Length = 686 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 197/728 (27%), Positives = 329/728 (45%), Gaps = 70/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L EI +EE+PA+ ++ + L E + + ++ Y TP R+ +G++ Sbjct: 1 MANLLYEIGTEEMPAQYMPGILKEYRELAGKKLAEARIPFSTVKVYGTPRRMAFLAEGVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP + G +A GF R G+ Q K AV Sbjct: 61 EKQEDSNVESKGPSLKIAFDKDGNATRAAQGFARGQGVDVKDLVQ------KDGYVYAVK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + D+L I+ + + +PK+MRW+ F ++RP + ++ +L + Sbjct: 115 HLEGKKTIDLLPAILDDILHSLNFPKTMRWADYD-----FGFVRPFRWMVALL-----DD 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I ++ ++ G GHRF + H I + Y + +E+ V++D + RR I Sbjct: 165 QMIPVEANDVKSGREARGHRFLSNHLITIPDAAAYEKTMEDNFVMVDVDKRRETIRKQIE 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA A G + DLLEE+ LVE+ G D KYL LP+ I ++ +Q+ F Sbjct: 225 DLAVAEGGKAAISPDLLEEVTFLVEYPTALCGHIDDKYLRLPDCAIITPMRDHQRYFPMF 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L FI V N + + GN RV+ ARL+DA+ F+ D+ Sbjct: 285 DKDGKLMPKFITVRNGG-KEHLDIVTHGNERVLRARLDDAVFFFDNDRKKSLAQH----- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI--AQLIDADVALV 411 R + +V F +G ++ R++ L + A ++AD V Sbjct: 339 -----------------REGLHEVAFQHGLGNMYDKTERLQKLCDVLVKATGLEADAKAV 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA +LSKADL T +V EF ELQG +GKEYA+L NE AI E PR + +P + Sbjct: 382 ERAALLSKADLVTGMVTEFTELQGTMGKEYALLDNEGEKVAQAIGEQYMPRFAGDELPQS 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------ 525 +++ADKLD ++ ++ P+GS+DPYALRR LGI+ I+ + + PL Sbjct: 442 NEGRILAVADKLDNIVATFSRGMAPTGSQDPYALRRQALGILNIVADGDVHFPLRAVLAE 501 Query: 526 ----------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLI 574 ++ + FF R K L D+ +R+D+++A+L P D+L I Sbjct: 502 TLKNLPVEVENEARLLDEVADFFAQRAKNMLLDKGVRYDVVDAVLAAPGLDDLADIFVRA 561 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L+ + + K + + R+ I KN + + AEK LY + Sbjct: 562 DALSAYLETEKAADSIQAFTRVENI-----SKNNVVEAPVDAALFQDAAEKALYEAVEKV 616 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++Y + + P+ FFD V+V D +V++NRL+LL +K + Sbjct: 617 AAASAPLAADRKYADLLAANDELAAPVNAFFDAVMVMDKDEKVKNNRLALLNQVKKQVNQ 676 Query: 695 VINVQKIV 702 V ++ ++V Sbjct: 677 VADLSQLV 684 >gi|189082265|sp|A9KBT7|SYGB_COXBN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 689 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 225/720 (31%), Positives = 362/720 (50%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 5 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 65 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 123 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR I + + Sbjct: 173 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 233 AASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 292 KNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 337 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 389 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 449 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 508 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 509 NYAVELPNVNVANQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 569 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 627 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 686 >gi|209363714|ref|YP_001423632.2| glycyl-tRNA synthetase subunit beta [Coxiella burnetii Dugway 5J108-111] gi|207081647|gb|ABS77223.2| glycyl-tRNA synthetase beta chain [Coxiella burnetii Dugway 5J108-111] Length = 692 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 225/720 (31%), Positives = 362/720 (50%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 126 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR I + + Sbjct: 176 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQK 235 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 236 AASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 295 KNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ I+ D L RA Sbjct: 340 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQINIDEQLAARA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G YA E +AI+EH PR + +P N +S Sbjct: 392 GLLSKCDLVSEMVYEFPTLQGIMGYYYAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 452 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 511 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 512 NYAVELPNVNVANQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 572 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 630 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 689 >gi|294651684|ref|ZP_06728986.1| glycyl-tRNA synthetase subunit beta [Acinetobacter haemolyticus ATCC 19194] gi|292822403|gb|EFF81304.1| glycyl-tRNA synthetase subunit beta [Acinetobacter haemolyticus ATCC 19194] Length = 689 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 203/718 (28%), Positives = 350/718 (48%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L LK+ G+ + + Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALKAETEKGLKDAGLNFAAIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCFLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + ++++ Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DNQVVE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I + +LA Sbjct: 175 ATIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQDQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI +SNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITISNIESKDPIQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT + RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWNKSERIAKLAVALSPITGANAADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA L+ E+ +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARLEGESHEVAEALGEQYLPKFAGDVLPQTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN++D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENELDVTIEELVNFALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+I+A+ + L + +N F Sbjct: 512 DVVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVIQAVQALAPKSPLDFDKRVTAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ AEK LYA +S +Q Sbjct: 572 TLPEAAALAAANKRVANILAKEATPEG----AVVEANLVEAAEKALYAELSALTPVVQPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y + L ++ PI+ FF+ V+V DD E++ NRL LL ++++ + +V Sbjct: 628 LAARNYTEALSKLAALRAPIDAFFEGVMVMADDAELKANRLRLLAQLRDLFTAIADVS 685 >gi|253576086|ref|ZP_04853418.1| glycyl-tRNA synthetase beta subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251844429|gb|EES72445.1| glycyl-tRNA synthetase beta subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 693 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 200/733 (27%), Positives = 345/733 (47%), Gaps = 73/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A E L + L+E + + + Y TP RL + +K + Sbjct: 1 MAKDLLFEIGLEEMPARFIRAAMEQLKERTVKWLEESVIQHGAVEAYATPRRLAVLVKDV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF RS G ++ VY++ Sbjct: 61 AEKQEDVHEEVKGPSRKIALDENGQWSKAALGFARSQGASP-EQFTFREVGGTEYVYVSK 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 R +L + +Q + +PK+MRW F ++RP++ ++ + + Sbjct: 120 SRI-GVETSSLLAEGLLGILQAMNFPKNMRWGNYD-----FKFVRPIRWLVALFGKD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I+L++ + N+T GHRF + ++ Y+ L V+ D R+ I N Sbjct: 171 --VIELEIAGVKSDNVTRGHRFLGTETV-IEEPAAYVETLRSQHVIADVNERQALIQNQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G + +DLLEE++ LVE V G+F++ +L +P+E++ +++ +Q+ F Sbjct: 228 EALAKEKGWHIAVKEDLLEEVLFLVETPTVLYGTFEESFLNIPQEVLITSMREHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N + I +GN +V+ ARL DA F++ DQ Sbjct: 288 LNAQGNLLPYFVTVRNGNNT-SLDVIARGNEKVLRARLSDAKFFYEEDQK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 L + A + +VFH ++GT G++V RIR +K++ ++ D Sbjct: 337 ------------LAIKDALSKLESIVFHEELGTIGDKVRRIRRNTEKLSAMLRTDTGTAE 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 R + K DL T++V EFPELQG +G++YA E I EH +PR + VP Sbjct: 385 AAARTAEICKFDLVTQMVYEFPELQGVMGEDYARKAGEPEVVAKGIFEHYQPRFADDAVP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + VS+ADK+DT++ ++I P+GS+DPY LRR GI++II+E+K+ + L+ Sbjct: 445 ASTVGSIVSIADKIDTIVGCFSIGIIPTGSQDPYGLRRQAAGIVQIIVEHKLSVSLTDIF 504 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + ++L+ FF R++ L D ++R+D+++A+L D++++ Sbjct: 505 KLALETHQQFRGLKRSEDEIMKDLMDFFGLRVRKTLSDENLRYDVVDAVLSAGYDDVVST 564 Query: 571 VDLIKHLNEFFSS-AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 V K L E + + + + S R+ + A ++ L AE+ LY Sbjct: 565 VARGKALMEAVDTKEEFKATVESFGRVSNLAAKA------TGEKVRSDLLSEPAEQALYE 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +E++ + +L+ + + I +FFD V+V +D +R NRL+LL I Sbjct: 619 AWRSISDKYRETLASRDAAGALELIGGLKDAITVFFDAVMVMAEDDAIRTNRLALLAAID 678 Query: 690 NIILIVINVQKIV 702 + + K+V Sbjct: 679 EDLKAFADFGKLV 691 >gi|54297752|ref|YP_124121.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Paris] gi|53751537|emb|CAH12955.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Paris] Length = 688 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 200/722 (27%), Positives = 357/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCGVTV--DALTKTQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 L-----GVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI +S+ +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNIASSNP-KQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 338 -------QPLSAHIP--STEQVIFQVKLGSMYDKVQRIKAMMDHLSQSLNLSSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEETVVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRIDTLAGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V+D ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEDESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|62261390|gb|AAX77986.1| unknown protein [synthetic construct] Length = 729 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 364/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 32 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 91 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 92 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--PKGDKLFYKTVQ 149 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S ++RP+ +L + + Sbjct: 150 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SNVEFVRPVHWVLALY-----GNDV 199 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A + Sbjct: 200 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENI 259 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 260 AKENDYQVVLDNDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 319 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 320 QGDLVANFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 363 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 364 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 416 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 417 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 476 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 477 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 536 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 537 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 596 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + E E L I + Sbjct: 597 TKFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELAKAAANEYELALAYSIEEVAAD 656 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R NRL+LL + + + + + Sbjct: 657 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRKNRLALLVNLHKMFIGIAD 716 Query: 698 VQKI 701 + K+ Sbjct: 717 ISKL 720 >gi|56707878|ref|YP_169774.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110670349|ref|YP_666906.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis FSC198] gi|224456956|ref|ZP_03665429.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|254370371|ref|ZP_04986376.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874693|ref|ZP_05247403.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|56604370|emb|CAG45397.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110320682|emb|CAL08780.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis FSC198] gi|151568614|gb|EDN34268.1| hypothetical protein FTBG_00131 [Francisella tularensis subsp. tularensis FSC033] gi|254840692|gb|EET19128.1| glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|282159061|gb|ADA78452.1| Glycyl-tRNA synthetase beta subunit [Francisella tularensis subsp. tularensis NE061598] Length = 694 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 205/724 (28%), Positives = 364/724 (50%), Gaps = 59/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SNVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + + ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQSKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDNDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 +F++S K + + S KR+ IL+ + E E L I + Sbjct: 571 TKFYNSDKAQSLIASNKRVANILSKNATDKDYYYNIELAKAAANEYELALAYSIEEVAAD 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++++ Y +LL + + I FF+ V+V +D ++R NRL+LL + + + + + Sbjct: 631 LHKYLNNREYSYALELLTCLDKVISEFFENVMVIDEDIKIRKNRLALLVNLHKMFIGIAD 690 Query: 698 VQKI 701 + K+ Sbjct: 691 ISKL 694 >gi|257419861|ref|ZP_05596855.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T11] gi|257161689|gb|EEU91649.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T11] Length = 694 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L DK+LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDKELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D++V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDKKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|37222167|gb|AAP70370.1| GlyS [uncultured bacterium] Length = 692 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 195/724 (26%), Positives = 335/724 (46%), Gaps = 61/724 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL+E+ +EE+P + + + LK + + ++ + P RL + ++ L+ Sbjct: 3 ADFLVELGTEELPPKALKNLMTSFAETIEANLKAAELSFTAIKPFAAPRRLAVLVENLAS 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P K GP G KA F G+ + K + +A + Sbjct: 63 ETPAKELVVWGPPAAIAFDKEGQPTKAALAFAEKNGIAASELK--AESDGKAEKLVARIT 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + D+L+ +V A+ K+P K M+W ++RP+ ++ + ++ Sbjct: 121 TEGKKTVDLLEAVVTDALAKLPIAKRMKWGAKRE-----EFVRPVHWLVMLFGSD----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAH 233 +I+ + + G T GHRFH + I + Y L+ V+ D R I Sbjct: 171 VINASVLGLTAGRTTRGHRFHYNNTIDLAKAGDYASVLKNTGFVVADFTERGATIKQQVE 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A VG V D +LL+E+ LVEW G F++++L +P E + ++K +QK F Sbjct: 231 AEAKKVGGVAVIDANLLDEVTSLVEWPVALTGKFEERFLAVPSEALIASMKEHQKYFHVV 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N FI V+NIQ+ D + I+ GN RV+ RL DA F++ D+ Sbjct: 291 DTNGKLKNNFITVANIQSKDP-SQIIDGNERVIRPRLSDAAFFFETDKK----------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 L RL +VF A++GT ++ R+ L K IA ++AD A +R Sbjct: 339 ---------TTLASLRERLKT--IVFQAQLGTIYDKTERVAGLAKLIAGKLNADAASAER 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L K+DL T +V EF ++QG G YAV EN A+ E PR + +P Sbjct: 388 AAQLCKSDLVTNMVGEFDDMQGIAGYYYAVNDGENAEVAAAMNEQYMPRFAGDQLPATTT 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 ++LAD+LDT+ + I ++P+GSKDP+ALRRA++ ++RI++E + + L + Sbjct: 448 GAIIALADRLDTISGIFGIGQQPTGSKDPFALRRASIAVLRILVEKNLALDLRDLLTFAK 507 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + ++ + +R + + D +I ++ +++ + L I + +N Sbjct: 508 NQHKNLTVGDELVEQVLAYMLERFRAFFEDANIPAEVFQSVTAKQLSQPLDINQRVLAVN 567 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 EF + + KR+ ILA K+N S E++ L +AEK L +S + Sbjct: 568 EFSKLPQALALAAANKRVSNILA---KQNAAPSTEVNAALLQEDAEKILAQAVSAKAAVV 624 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + Y + L + +P++ FFD V+V DD ++ NRL+LLQ ++ + L V ++ Sbjct: 625 APLFAAREYTKALAALADLQQPVDAFFDSVMVMSDDPALQQNRLALLQQLRGLFLEVADI 684 Query: 699 QKIV 702 +V Sbjct: 685 SYLV 688 >gi|218247137|ref|YP_002372508.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 8801] gi|257060208|ref|YP_003138096.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 8802] gi|218167615|gb|ACK66352.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 8801] gi|256590374|gb|ACV01261.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 8802] Length = 711 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 200/738 (27%), Positives = 342/738 (46%), Gaps = 70/738 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA + A + L+E + ++ Y TP RL + ++GL+ H Sbjct: 3 FLLEVGTEELPADFLNGAIAQWQERIPASLQEHFLTPNSITVYGTPRRLAVLIEGLADHQ 62 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP G KA +GF R + ++ +I+ KGD + Sbjct: 63 SDRTEVIKGPPAAAAFKDGQPTKAAEGFARKQAVD-VATLEIRPTD-KGDFVFIEKKIAG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R + +L+ ++P I + + MRW + RP++ ++ + E ++I+ Sbjct: 121 RPTKAILQELIPSWINGLEGRRFMRWGDGD-----LRFPRPIRWLVTLCDGEVLPLELIN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 I ++YGHR P P+ + Y L+ V +DP RR I +A Sbjct: 176 GS-TTIISDRVSYGHRILHPEPVSIPHGSEYRETLQSVYVEVDPHERRQTIEAGVKAVAQ 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +G +LL+E+ LVE+ G FD+++L LP E+I + T+Q+ F + ++G Sbjct: 235 TLGGTAEIYPELLQEVTNLVEYPTAVPGKFDEEFLELPTEVITTVMVTHQRYFAVKDQQG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI +SN + I GN RV+ ARL DA F+ D Sbjct: 295 SLLPNFITISNGDRT-KSEIIAAGNQRVIRARLADAQFFYHAD----------------- 336 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRA 414 S+PLD + +L+ V F ++GT ++V RI + ++IAQ ++ ++ Sbjct: 337 ---CSEPLDTYLPQLET--VTFQNELGTMRDKVDRIMEIAQQIAQQLNLTPQQWDEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L K DL T++V EFPELQG +G++YA++ E+ S I EH PRG + +P + Sbjct: 392 AMLCKVDLVTQMVYEFPELQGIMGQKYALVSGESESVAQGIFEHYLPRGADDIMPQSLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V LAD+LDTLI+ + + P+GS DP+ALRRA +I I +++ I L+Q + Sbjct: 452 QVVGLADRLDTLISIFGLGMIPTGSSDPFALRRAANAVINITWNSQLSINLAQLLAQGCA 511 Query: 532 -------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 + L FF R++ L + + +DL+ A+L + ++LL Sbjct: 512 DFITGHQDKTSPLEPLKGFFIQRIQTLLQEELKLDYDLVNAVLGDNDPEYQERALEDLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL--EISPQYLLLEAEKRL 627 + D + L E ++ + E+ + R ++ A +E+ ++PQ +E Sbjct: 572 VRDRAQFLQEIRNNGQLERIYETVNRSTRLAAQGNLGFQELDPRKTVNPQLFQQRSENAF 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVRDNRLSL 684 Y + + + Y + + L I + FF D VLV +D ++R NRL+L Sbjct: 632 YQELIVLLPETLAAKSQRNYQLLVNGLTEIAPTVSNFFDGEDSVLVMDEDPKIRQNRLNL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L ++N + + IV Sbjct: 692 LGILRNHSRTLADFGAIV 709 >gi|322421192|ref|YP_004200415.1| glycyl-tRNA synthetase subunit beta [Geobacter sp. M18] gi|320127579|gb|ADW15139.1| glycyl-tRNA synthetase, beta subunit [Geobacter sp. M18] Length = 687 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 207/727 (28%), Positives = 346/727 (47%), Gaps = 68/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LEI EEIPA KA D+ +++ L+ + + + TP RL L +KGL Sbjct: 1 MAKDLFLEIGCEEIPAGFVPKAMADMELLMKRELETARIEFGEIVTLGTPRRLVLAVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ +GP G +A GF R G++ ++D ++ P KG+ AV Sbjct: 61 AARQPDAELTAMGPAKSAAYDADGNPTRAAQGFARGQGVE-VADLKVVMTP-KGEYLAAV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L ++P I +P+ KSMRW+ + RP+ I+ + Sbjct: 119 KSEVGRDTSELLPEMLPRLIGAIPFKKSMRWADFE-----VRFARPIHWIVALFDG---- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ I G+ + GHRF A V+ L HY+ + E V+ DPE R+ I + Sbjct: 170 -TVVPFSFGNIESGSASRGHRFMANTTFPVRDLAHYLEECERHFVIPDPEKRKAIIRQEI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R+A ++ D+ LLE++ LVE+ G+F +L +P E++ +++ +Q+ F Sbjct: 229 DRVARQAKANVLPDESLLEQVSFLVEYPSAVHGTFSPDFLVVPREVLITSMREHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI ++N D +V+GN RV+ ARL DA F+ D Sbjct: 289 VDDQGKLLPGFITINNTLTEDP-QVVVKGNERVLRARLSDARFFFDEDHKV--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 L+ R+ L VV+ AK+GT E++ R R L K +AQ +A V Sbjct: 339 -----------KLETRVESLK--SVVYQAKLGTSYEKMERFRELAKGLAQRHNAAVTEKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L KADL + +V EFPE+QG +G+EYA+ E+ + +AI EH P +P + Sbjct: 386 ARAATLCKADLVSGMVGEFPEVQGIMGREYALHDGEDAAVANAIAEHYLPTQAGGELPAS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 I VSLADK+DT+ +++ P+GS DPYALRR+ LGII IIL+ P+S ++ Sbjct: 446 DIGAFVSLADKMDTICGCFSVGLIPTGSADPYALRRSALGIINIILDKGYREPISGLVKA 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++++ FF R + DR D+++A++ D+L+ I Sbjct: 506 SLGLLEQKATRPVDEVQKDVLEFFRGRFVNLMADR-YPSDVVDAVVSVSFDDLVEAAAKI 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L EF ++ KR+ I+ + ++ + AE L+ + Sbjct: 565 RALAEFRKRDDFGALAVAFKRVCNIVKEG------VETPVAAELFQEPAEGGLFEAQNQV 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +++++ Y + ++ +++FFD+V+V +D VR NRL+LL I + Sbjct: 619 KGKVEKALSGADYLCALTEIATLKPAVDLFFDKVMVMAEDERVRQNRLALLTSIARLFGR 678 Query: 695 VINVQKI 701 + + ++ Sbjct: 679 LADFARL 685 >gi|304385064|ref|ZP_07367410.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici DSM 20284] gi|304329258|gb|EFL96478.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici DSM 20284] Length = 690 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 208/728 (28%), Positives = 354/728 (48%), Gaps = 75/728 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLEI EEIPA + + + L+ + LKE + Y ++ Q+ TP RL + + GL Sbjct: 5 YLLEIGLEEIPAHVVTPSIQQLAQKVAKFLKENRLSYDSIEQFSTPRRLAIRINGLGDRQ 64 Query: 64 PEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E+ GP G KA GF + GL T+ D K VY+ L + Sbjct: 65 PDIEEDAKGPARKIAQDADGNWTKAAIGFTKGQGL-TVDDITFKTIKGTEYVYVHKLIQ- 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +++L I ++ + +P M+W+ F ++RP++ ++ IL ++++ Sbjct: 123 GKTTQEILPGI-KDVVESLNFPTMMKWANYD-----FKFVRPIRWLVSIL-----DDEVL 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + +I G + GHRF + + + Y L+ V++D E R+ I +A Sbjct: 172 PFQILDIKAGRQSQGHRFLG-KAVDLANPSEYEEKLQAEFVIVDAEKRKALIREQIQAIA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 E+ + DLLEE+ LVEW F G FD KYL +PEE++ +++ +Q+ F R ++ Sbjct: 231 QEENWEVTPNADLLEEVNNLVEWPTAFSGKFDPKYLAIPEEVLITSMRDHQRFFFVRNQD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V N + +++GN +V+ ARLEDA F+ DQ N Sbjct: 291 GKLLPNFISVRNGN-KEHLENVIRGNEKVLTARLEDAAFFYDEDQKN------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---R 413 +D + RL V FH KIGT E+++R+ + + IA+++ D + R Sbjct: 337 -------SIDYYVDRLK--KVSFHDKIGTMAEKMTRVGSIAQVIAKMLGLDAETAEDLQR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P + + Sbjct: 388 AAAIYKFDLVTGMVGEFPELQGVMGEKYALLKGEKPAVAQAIREHYMPNSAEGELPESTV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 ++LADK D + +F++ PSGS DPYALRR GI+RI+ + + L++F E Sbjct: 448 GAVLALADKFDNIFSFFSAGMIPSGSNDPYALRRHAYGIVRILAQRDWSLDLNKFEEAVK 507 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ FF+DR+K YL + + +D+ +A+L N+ TI+ Sbjct: 508 QALADDQTSFGVDVDKNFAEVVEFFNDRIKQYLDHQSVSYDIEDAVLAGSQHNVTTIIAA 567 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L ++ + + + R+ +I K L + PQ E E +L+ +I+ Sbjct: 568 AEVLTNAKAADSFKDEIEALTRVQRI---ATKNTTAGDLAVDPQLFNNETEGKLFDLITK 624 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 E+M+ L S+ I +FD +V D +++ NRL+++ + N++L Sbjct: 625 I-----EAMNDSDMAAFFKELTSLTPAITEYFDATMVMDKDAKIKANRLNMMSRLANLVL 679 Query: 694 IVINVQKI 701 V ++ K+ Sbjct: 680 RVGDLTKV 687 >gi|226953821|ref|ZP_03824285.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter sp. ATCC 27244] gi|226835412|gb|EEH67795.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter sp. ATCC 27244] Length = 689 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 205/718 (28%), Positives = 349/718 (48%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L LK+ G+ + + Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALKAETEKGLKDAGLNFAAIEAYAAPRRLALKIVDIDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQ--AGKVEKVCFLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + +++++ Sbjct: 125 QSLDALLPQILQTALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQVVE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+TYGHRFHAP + + + Y+ LE+A V+ + E R+ I + +LA Sbjct: 175 ASIQDHKAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQDQVKKLAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DLL+E+ LVEW +F+++YL +P+E + T++ NQK F EG Sbjct: 235 EVNATAIVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEG 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI +SNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITISNIESKDPIQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT + RI L ++ + A+ A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAQLGTLWNKSERIAKLAVALSPITGANAADAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA L+ EN +A+ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARLEGENHEVAEALGEQYLPKFAGDVLPQTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------- 528 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN +D+ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENILDVTIEELVNFALQGYG 511 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+I+A+ + L + +N F Sbjct: 512 DVVKDHDKTRADAVAFLEGRYRAKYEDQGVAVDVIQAVQALAPKSPLDFDKRVTAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ AEK LYA +S +Q Sbjct: 572 TLPEAAALAAANKRVANILAKEATPEG----AVVEANLVEAAEKALYAELSALTPVVQPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y + L ++ PI+ FF+ V+V DD E++ NRL LL ++ + V +V Sbjct: 628 LAARNYTEALSKLAALRAPIDAFFEGVMVMADDAELKANRLRLLAQLRGLFTAVADVS 685 >gi|323466386|gb|ADX70073.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus helveticus H10] Length = 687 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 202/732 (27%), Positives = 347/732 (47%), Gaps = 77/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EEIPA + ++ + L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEIPAHVVPRSVKQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D ++ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ + +L + I+ + +P MRW + F ++RP+ ++ + ++ Sbjct: 120 QKEGKKASDILLG--MSDIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLFGSD--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 170 --VIPVKILDITAGRKTQGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 227 NELVKKNHWQIKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L N FI V N D I+ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDENGKLINHFIAVRNGN-KDYLDNIISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL + RL +V FH KIG+ E++ R+R++G + + D +V Sbjct: 337 -----------PLSHFVDRLK--NVSFHDKIGSMAEKMQRVRMIGDYLVKRWDLPENVVT 383 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ Sbjct: 444 ETTVGSLLSVADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEVL 503 Query: 529 ------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 +Q + F DR+K YL ++DL++A+L + I Sbjct: 504 PEIINMLGGVTPAKLPKGDSEQEIADFIRDRVKQYLQKNKFKYDLVDAVLASSQQDPSQI 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + S RI IL + + +++ + +E LYA Sbjct: 564 LAAANVLQLHHDDEEFKPVVESLTRINNILKKAKFNGK---VDVDESLFVDNSETELYAG 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + + + + + I+ +F+ ++ D V++NRL+ L + Sbjct: 621 VQNLQ-------NIESLADLYQGFVHLQPVIDQYFEANMIMDKDENVKNNRLAQLYAVSE 673 Query: 691 IILIVINVQKIV 702 + + ++ K+V Sbjct: 674 LADRLGDLSKLV 685 >gi|83945361|ref|ZP_00957709.1| glycyl-tRNA synthetase beta subunit [Oceanicaulis alexandrii HTCC2633] gi|83851195|gb|EAP89052.1| glycyl-tRNA synthetase beta subunit [Oceanicaulis alexandrii HTCC2633] Length = 711 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 255/740 (34%), Positives = 406/740 (54%), Gaps = 70/740 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL EI+ EEIPARMQ +A EDL+ ++ LKE G+ + ++ + P RL + ++GL Sbjct: 1 MAQFLFEIFCEEIPARMQARAEEDLARLMSDRLKEAGLKWDSLEAFSGPRRLGVVIEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + + EER GPR A +KA++GF+R G+ ++ C+I++ KKG Y+AV+ KP R Sbjct: 61 LKTEDVREERKGPRTDAPEKALEGFMRGAGITSLDQCKIEE-GKKGSFYIAVIEKPGRET 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ +P ++ PWPKSM++ + A W+RPL+S++ +L ++I ++ Sbjct: 120 AEVIAEAIPDILKSFPWPKSMKFGKGET---AQRWVRPLRSLISLLDG-----QVIKTEV 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G++T GHR H P V+ Y L + V+L + R+ +L+ A R+ G Sbjct: 172 FGINSGDVTDGHRIHGSGPFSVRDFADYEAKLRKNGVILRRDERKQLVLDGARRVCEEAG 231 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 LEL+ED+ LLEE+ GLVE +G D +L LP E+I LT+KT+QK F R + L Sbjct: 232 LELIEDQGLLEEVTGLVEHPAPILGDMDPDFLDLPPEVIALTMKTHQKYFAVRDPKSQRL 291 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 + F++++N A DGG AI GN+RV++ARL DA HFW D+ + Sbjct: 292 TSKFVVLANQDAPDGGKAIAAGNARVLSARLSDARHFWDLDRKTGLEAMAS--------- 342 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 ++ V FH K+G+ ++V R+ L +++A ++ AD + ++A L+K Sbjct: 343 -------------ELGKVTFHEKLGSVADKVERVAKLARELAPVVGADADMAEKAARLAK 389 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +++V EFPELQG +G+ YA+ + DAI++H KP+GP ++VPT +S V+L Sbjct: 390 ADLVSQMVYEFPELQGAMGRYYALDAGLDPQIADAIKDHYKPQGPSDDVPTAPVSAAVAL 449 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI---------- 529 ADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IRI+L+ + L + Sbjct: 450 ADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRILLDGDYRLALKKLFSPTVLDSAGG 509 Query: 530 ----------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + +L+ F DRLK++L D ++HD+I+A+ +D+L+ + + L Sbjct: 510 DGGVQGDMIAKRDDLLAFCADRLKVHLKDEGVKHDVIDAVFALGDDDLVRVTKKARALQA 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISL-----------EISPQYLL-------L 621 F +S G+ L +R IL EEKK +++ + ++ Sbjct: 570 FMNSDDGQALLQGYRRAANILTAEEKKGFDLASARAEAVSGSDKDTDAALMIAIAKTADA 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 E+ L A I ++ + + L + EP++ FF+ V+VN +D VR NR Sbjct: 630 AEERALIAAIEGADEVASVALTSEDFEGAMSALSQLREPVDAFFEAVVVNAEDSMVRRNR 689 Query: 682 LSLLQYIKNIILIVINVQKI 701 L LL I+ V + ++ Sbjct: 690 LLLLSRIRAAADQVADFSRL 709 >gi|311069126|ref|YP_003974049.1| glycyl-tRNA synthetase subunit beta [Bacillus atrophaeus 1942] gi|310869643|gb|ADP33118.1| glycyl-tRNA synthetase subunit beta [Bacillus atrophaeus 1942] Length = 679 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 206/721 (28%), Positives = 348/721 (48%), Gaps = 63/721 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLEI EE+PAR H++ L L L E + + ++ + TP RL + +K Sbjct: 1 MSKQDLLLEIGLEEMPARFMHESMVQLGEKLGNWLTERNIAHGEVKLFNTPRRLAVLVKD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ + EE GP G KA GF + G + D IK KG Y+ Sbjct: 61 VAEKQADIKEEAKGPAKKIALDSDGNWTKAAIGFSKGQGAG-VEDLYIK--DVKGTEYVF 117 Query: 112 VLR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + + + + +L I I + +PK+MRW +IRP+K I+ + + Sbjct: 118 VQKFQAGQDTKTLLPEI-EGLITSLHFPKNMRWGNED-----LRYIRPIKWIVALFGQD- 170 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + + G++T GHRF H + +++ Y L+E V+ DP+ R++ I + Sbjct: 171 ----VIPFSITNVQSGHMTKGHRFLG-HEVSIEAPSAYEEKLKEQHVIADPDIRKSMIQH 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +A+ + D+DLL E+ LVE+ GSF+ ++L +PEE++ T+K +Q+ F Sbjct: 226 QLESIAAEKNWNIPVDEDLLNEVNHLVEYPTALYGSFEPEFLSIPEEVLVTTMKEHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + G L F+ V N + + +GN +V+ ARL DA F+K DQ N Sbjct: 286 PVKDQNGDLLPYFVTVRNGNS-HAIENVARGNEKVLRARLSDASFFYKEDQKLNIN---- 340 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA- 409 + + +L+ ++VFH ++G+ ++V R+ + +K+A + AD Sbjct: 341 ----------------ENVKKLE--NIVFHEELGSLADKVRRVTTIAEKLADQLKADEET 382 Query: 410 --LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 L+ RA +SK DL T ++ EFPELQG +G++YA + E + A+ EH PR Sbjct: 383 KKLITRAAEISKFDLVTHMIYEFPELQGIMGEKYARMLGEEEAVAIAVNEHYMPRAAGGE 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 P+ V+LADKLDT+ +F++I P+GS+DPY LRR GI+ I+L+ I Q Sbjct: 443 TPSTFTGAVVALADKLDTITSFFSIGVIPTGSQDPYGLRRQASGIVSILLDQNWGISFEQ 502 Query: 528 F------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++ L+ FF RLK ++ IRHD+I+A+L + + L + Sbjct: 503 LLTFVKTDKNSELLDFFTQRLKYVMNAEQIRHDVIDAVLDSSELEPYSALHKAHVLEKKL 562 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + ++ + R+ I E N I P E E +LY + + +S Sbjct: 563 GAPGFKETAEALGRVISISKKGEHGN------IQPGLFENEQEAKLYDAYKEAKRDLHDS 616 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + K Y L ++ EPIE +F+ +V+ D+ ++ NRL+ + + + I N+ + Sbjct: 617 FNKKDYEAALTALAALKEPIEEYFNHTMVHADNETLKANRLAQMINLADEIKSFANMNAL 676 Query: 702 V 702 + Sbjct: 677 I 677 >gi|149927715|ref|ZP_01915967.1| glycyl-tRNA synthetase subunit beta [Limnobacter sp. MED105] gi|149823541|gb|EDM82771.1| glycyl-tRNA synthetase subunit beta [Limnobacter sp. MED105] Length = 694 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 210/727 (28%), Positives = 354/727 (48%), Gaps = 62/727 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 L+E+++EE+P + + +L L++EG + N + + +P RL + + Sbjct: 3 STLLVELFTEELPPKALQTLGNAFAELLSKTLRDEGHLADNSAVEAFASPRRLACRITNV 62 Query: 60 SPHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 + SPEK ERL P G + L S GL I+ Q++ K DV Sbjct: 63 AAVSPEKKIQERLLPVKIGLDANGQPTPPLQKKLDSLGLGAIAVDQLETISDGKQDVLHI 122 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +ED L + A K+P PK M + S ++RP ++C+ Sbjct: 123 SRTQAGKALEDSLTKALDTATTKLPIPKVMSYQRPDG--STVHFVRPAHRLVCL-----H 175 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K++ + + IT GHRF + + + S D Y LE E V+ R+ AI+ Sbjct: 176 GDKVVPAQVLGLESDRITLGHRFLSQGVLNIASADSYETQLETEGKVIASFTKRKAAIVK 235 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A+ G ++V+ +DL++E+ LVEW V+ F+K++L +P+E + LT++ NQK F Sbjct: 236 SLAEQAA--GDKVVQPEDLIDEVCALVEWPVVYEAGFEKEFLEVPQECLILTMQANQKYF 293 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G + N F+LVSN+ S I GN RV+ ARL DA F+ +D+ Sbjct: 294 AITDQNGKMKNRFLLVSNLLTSTP-QLITTGNERVLRARLADAKFFFDQDRK-------- 344 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 K L+ R+ L +VV+H K+GTQ +R R+ L +A L ADV L Sbjct: 345 ------------KTLESRLPGL--ANVVYHNKLGTQKDRNGRLVELAAALAPLCGADVEL 390 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA +L KADL T++V EFPELQG +G+ YA E+ AI +H PR + +P Sbjct: 391 AKRAALLCKADLLTDMVGEFPELQGNMGEHYAHHDGEHADVAQAIADHYSPRFAGDQLPR 450 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 N + + +LADKL+T++ + I P+G KDP+ALRR LG+IR+++E + + L + Sbjct: 451 NPVGLAAALADKLETMVGIYGIGLIPTGDKDPFALRRHALGVIRMVIEKNLKLDLIDALN 510 Query: 531 DQNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + + F DRL+ YL D+ +E++L + ++ Sbjct: 511 KASSLFSAFPDFKQSVEGLAGFIQDRLRGYLKDQGYTTAEVESVLSQNPSQFADLPKRLE 570 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KRI IL KK S ++ L ++AEK L A + + Sbjct: 571 AVRAFSQLPESQALAAANKRITNIL----KKTEVGSSDVDASLLQVDAEKALAAQVKEVE 626 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 H + + Y Q +L + ++ FF+ V+V ++ +++NRL+LL+++ ++ V Sbjct: 627 PHATRAFEQGDYQQALLVLAPLKANVDAFFENVMVMDNNEALKNNRLALLKHMHGLMNRV 686 Query: 696 INVQKIV 702 ++ ++ Sbjct: 687 ADISQLA 693 >gi|212211691|ref|YP_002302627.1| glycyl-tRNA synthetase subunit beta [Coxiella burnetii CbuG_Q212] gi|212010101|gb|ACJ17482.1| glycyl-tRNA synthetase beta chain [Coxiella burnetii CbuG_Q212] Length = 692 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 223/720 (30%), Positives = 360/720 (50%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLEI EE+P R ++ ++ LS + L++ + ++N+ +Y TP RL + + L+ Sbjct: 8 DFLLEIGCEELPPRRLNQLSQALSQTIKSELEKADLSFENIHRYATPRRLAVLVNNLALQ 67 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP V A A GF +S G+ T K KKG+ + + Sbjct: 68 QPQRKIERQGPSVKAAFDKDQTPTLACFGFAQSCGVSTAQLK--VKKTKKGEFIYCEIEQ 125 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + D+L I+ A++++P PK+MRW ++RP+ I+ +L + + Sbjct: 126 PGQNTLDLLPNIIQSALKQLPTPKAMRWGDHKEF-----FVRPVHWIILMLGKD-----L 175 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDAHR 234 + L T GHRFH P I V D Y + L V+ D E RR I + + Sbjct: 176 VPATLLGKMASCETRGHRFHHPKNILVTKPDDYQKLLLTHGMVIADFEKRREKIRDLIQK 235 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 AS G E + D+ LLEE+ G+VEW + +G+F ++L LP E++ T+K +Q+ F + Sbjct: 236 AASEKG-EAIIDEGLLEEVTGMVEWPVILVGNFKAEFLELPPEVLITTMKVHQRTFPIKN 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI+VSNI++ + IV GN RV+ ARL DA F+ D Sbjct: 295 KNGDLLPYFIIVSNIESKNPKRVIV-GNERVINARLADASFFYDND-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L L+ R+ +L DV+F ++GT ++ RI L IA+ + D L RA Sbjct: 340 ------LRTSLENRLPKLG--DVIFQRQLGTLADKARRIEKLAAFIAKQTNIDEQLAARA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL +E+V EFP LQG +G A E +AI+EH PR + +P N +S Sbjct: 392 GLLSKCDLVSEMVYEFPTLQGIMGYYCAFHDKEPPLVAEAIKEHYLPRFSGDQLPRNLLS 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 V++AD++DT+I IN+ P+G KDP+ALRRA LGI+RI++E ++ + L + + Sbjct: 452 ACVAVADRIDTIIGIIGINKSPTGDKDPFALRRAALGILRILIEKELSLDLFALLNEAKN 511 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ + ++++ + A+L + L IK + Sbjct: 512 NYAVELPNVNVVNQSFDFIIERLRAWYLEKEVPASVFMAVLASHPADPLDFDRRIKAVQH 571 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KR+ IL + + + S I +AE L + + + Sbjct: 572 FQTLPEADALAAANKRVSNILKKQAAELK--SKTIDHSLFDSDAEHLLADQLKERAELVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + L S+ EPI+IFFD+V+V VDD+E R+NRL+LL ++ + + ++ Sbjct: 630 NLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQIADIS 689 >gi|148265692|ref|YP_001232398.1| glycyl-tRNA synthetase subunit beta [Geobacter uraniireducens Rf4] gi|189082268|sp|A5G7Q7|SYGB_GEOUR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146399192|gb|ABQ27825.1| glycyl-tRNA synthetase beta chain [Geobacter uraniireducens Rf4] Length = 688 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 199/726 (27%), Positives = 332/726 (45%), Gaps = 66/726 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LEI +EEIPA KA ++ ++ L + + ++ TP RL L + ++ Sbjct: 3 KELFLEIGTEEIPAGFLPKAMAEMEGLIRKELDNARIAFGEVKAMATPRRLALVVSQVAG 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + +GP G +A +GF R G++ + + + KG+ + Sbjct: 63 QQADAEITAMGPAKKVAFNEDGTPTRAGEGFARGQGVEPSALSIVVTE--KGEYVAVTKK 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L I+P I + + KSMRW + RP+ I+ + Sbjct: 121 ETGVPTVGLLGEILPRLINNISFKKSMRWGDLD-----VRFARPVHWIVALFDGI----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ I G ++ GHRF A V+ HY+ + E V+ DP R+ I + HR Sbjct: 171 VVPFSFGNIESGTMSRGHRFMANTSFPVRDFTHYLDECERHFVIPDPAKRKEIIRREIHR 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A A G L+ D+ LLE++ LVE+ G+F ++L +P E++ +++ +Q+ F Sbjct: 231 VAKAAGGRLLPDEGLLEQVTYLVEYPSAVHGTFSAEFLVVPREVLITSMREHQRYFSLVD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++N D + +V+GN RV+ ARL DA F+ D+ Sbjct: 291 DNGKLLPGFITINNTLTEDP-SVVVKGNERVLRARLSDARFFFDEDKKV----------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 PL+ R+ L V++ AK+GT E++ R R L + +A+ + + V + Sbjct: 339 ---------PLENRVESLK--SVLYQAKLGTSYEKMERFRALAEGVAEELQPGLKEKVSQ 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL T +V EFPE+QG +G+EYA LQ + +AI EH P +P + I Sbjct: 388 AATLCKADLVTGMVGEFPEVQGIMGREYAFLQGIDPGVANAIAEHYLPTQAGGELPASDI 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 VS+ADKLDT+ +++ P+GS DPYALRRA LGII II+ + L+ + Sbjct: 448 GAFVSIADKLDTICGCFSVGLIPTGSADPYALRRAALGIINIIVAKGYALQLTTLVSKAL 507 Query: 533 ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ FF R + DR D+++A++ D+L+ I+ Sbjct: 508 ARLEGKLTRKKEEVFGDVMDFFQGRFVNLMTDR-FPADVVDAVVAVSFDDLVDTAAKIEA 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L F E ++ KR+ I+ L+ +AE L+ Sbjct: 567 LAVFKKRPDFEPLAVAFKRVCNIVKGPVVVVGVNELD-----FEEDAEGTLHRAYHSVAG 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + Y + ++ ++ FFD V+V +D VR+NRL+LLQ IK + + Sbjct: 622 TVAAKVAERDYLAALTQIATLKGAVDDFFDNVMVMAEDERVRNNRLALLQEIKGLFRDIA 681 Query: 697 NVQKIV 702 + KI Sbjct: 682 DFAKIT 687 >gi|114567035|ref|YP_754189.1| glycine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317967|sp|Q0AWT6|SYGB_SYNWW RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114337970|gb|ABI68818.1| Glycine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 688 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 222/729 (30%), Positives = 351/729 (48%), Gaps = 68/729 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+P+ + +DL + L E + + TP RL L++K + Sbjct: 1 MAQDLLLEIGVEEMPSAYMPRVLKDLKDLAQKNLAEARLSCGEVLTLGTPRRLCLWVKEI 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S + + E GP+ G KA GF RS G+ QI++ + A+ Sbjct: 61 SEEQEDSLLENRGPKKSIAFDANGNPSKAGLGFARSQGVDFRE-LQIREVSGV-EYLFAI 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ + E +L ++ I + +PKSM WS + + RP++ +L I Sbjct: 119 KKEKGQAAEQILPGLLLKVIHSLSFPKSMTWSYYQT-----RFARPIRWLLAIF-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K ++ +++ I N TYGHRF + + V S+D Y R L E V+LD R+ I Sbjct: 169 DKNVEFNIENIKSANYTYGHRFLSTGVLLVTSIDDYFRVLREHYVILDQAERKKMIWQQV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++A G + +E+++LLEE+ LVE+ F G F YL +P E++ ++ +Q+ F Sbjct: 229 QKVAGEAGGKAMENEELLEEVAFLVEFPTAFYGEFSPSYLDVPPEVLTTSMIEHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L F+ V N + GN RV+ ARLEDAL FW D Sbjct: 289 YNNEGRLLPGFVGVRNG-TDYCLDIVRAGNERVLKARLEDALFFWNEDSR---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 K L++ A+L +V+FH ++GT ++V R++ L I Q + Sbjct: 338 ----------KSLEEMSAKLK--NVLFHERLGTLADKVLRLQKLALFIGQQTGLGQPEKL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 R+ +L KADL + +V EFPELQG +G+ YA E +AI EH PR + +P++ Sbjct: 386 QRSALLCKADLMSNMVYEFPELQGIMGRYYASGSAEEPEVAEAIFEHYLPRFAGDKLPSS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 I +SLA+K+D L+ ++I KPSGS+DPYALRR LG++ IIL+ K+ I L E Sbjct: 446 AGGIVLSLAEKMDNLMGCFSIGIKPSGSQDPYALRRQALGLVNIILDKKLSIDLKLVFEQ 505 Query: 532 Q------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L+ F + R++ L D I +D+++A L + +L Sbjct: 506 AYLGYKDIDLEKSREDSVKELLDFIYQRMRGVLLDNGISYDVVDAALSRPSFDLFETYYR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L EF S E F++ R+ + E S EI L+ E+EK L + Sbjct: 566 AFKLQEFKKSPVFEDFMVVYNRVHNLSRKWE------SEEIDLDLLVDESEKNLCQKLPG 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I++S+ + Y + +LL ++ I+ FF V+V VDD ++ RL +L+ I N+ Sbjct: 620 LQEDIKKSLIAQDYTRALELLAALRADIDQFFTAVMVMVDDERLKAARLGILKSIANMFN 679 Query: 694 IVINVQKIV 702 + + KIV Sbjct: 680 SIADFSKIV 688 >gi|270291314|ref|ZP_06197536.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici 7_4] gi|270280160|gb|EFA25996.1| glycyl-tRNA synthetase beta subunit [Pediococcus acidilactici 7_4] Length = 690 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 208/728 (28%), Positives = 354/728 (48%), Gaps = 75/728 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLEI EEIPA + + + L+ + LKE + Y ++ Q+ TP RL + + GL Sbjct: 5 YLLEIGLEEIPAHVVTPSIQQLAQKVAKFLKENRLSYDSIEQFSTPRRLAIRINGLGDRQ 64 Query: 64 PEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ E+ GP G KA GF + GL T+ D K VY+ L + Sbjct: 65 PDIEEDAKGPARKIAQDADGNWTKAAIGFTKGQGL-TVDDITFKTIKGTEYVYVHKLIQ- 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +++L I ++ + +P M+W+ F ++RP++ ++ IL ++++ Sbjct: 123 GKTTQEILPGI-KDVVESLNFPTMMKWANYD-----FKFVRPIRWLVSIL-----DDEVL 171 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + +I G + GHRF + + + Y L+ V++D E R+ I +A Sbjct: 172 PFQILDIKAGRQSQGHRFLG-KAVDLANPSEYEEKLQAEFVIVDAEKRKALIREQIQAIA 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 E+ + DLLEE+ LVEW F G FD KYL +PEE++ +++ +Q+ F R ++ Sbjct: 231 QEENWEVTPNADLLEEVNNLVEWPTAFSGKFDPKYLAIPEEVLITSMRDHQRFFFVRNQD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V N + +++GN +V+ ARLEDA F+ DQ N Sbjct: 291 GKLLPNFISVRNGN-KEHLENVIRGNEKVLTARLEDAAFFYDEDQKN------------- 336 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---R 413 +D + RL V FH KIGT E+++R+ + + IA+++ D + R Sbjct: 337 -------SIDYYVDRLK--KVSFHDKIGTMAEKMTRVGSIAQVIAKMLGLDAETAEDLQR 387 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPELQG +G++YA+L+ E + AI EH P +P + + Sbjct: 388 AAAIYKFDLVTGMVGEFPELQGVMGEKYALLKGEKSAVAQAIREHYMPNSAEGELPESTV 447 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 ++LADK D + +F++ PSGS DPYALRR GI+RI+ + + L++F E Sbjct: 448 GAVLALADKFDNIFSFFSAGMIPSGSNDPYALRRHAYGIVRILAQRDWSLDLNKFEEAVK 507 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ FF+DR+K YL + + +D+ +A+L N+ TI+ Sbjct: 508 QALADDQTSFGVDVDKNFAEVVEFFNDRIKQYLDHQSVSYDIEDAVLAGSQHNVTTIIAA 567 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L ++ + + + R+ +I K L + PQ E E +L+ +I+ Sbjct: 568 AEVLTNAKAADSFKDEIEALTRVQRI---ATKNTTAGDLAVDPQLFNNETEGKLFDLITK 624 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 E+M+ L S+ I +FD +V D +++ NRL+++ + N++L Sbjct: 625 I-----EAMNDSDMAAFFKELTSLTPAITEYFDATMVMDKDAKIKANRLNMMSRLANLVL 679 Query: 694 IVINVQKI 701 V ++ K+ Sbjct: 680 RVGDLTKV 687 >gi|238022199|ref|ZP_04602625.1| hypothetical protein GCWU000324_02106 [Kingella oralis ATCC 51147] gi|237866813|gb|EEP67855.1| hypothetical protein GCWU000324_02106 [Kingella oralis ATCC 51147] Length = 686 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 208/708 (29%), Positives = 350/708 (49%), Gaps = 62/708 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I + Y +P RL + + + P ++ R Sbjct: 15 PPKALNNLGNHFAQSIAEGLEKAQLIDGTTQYTAYASPRRLAVSVANVKPVQADQHVVRK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 G V G KA++GF RS G++ S +I D K DVY + + + +L Sbjct: 75 GVSVAAGMKDGVPTKALEGFARSCGVEIGS-LKIIHD-GKQDVYAHEFTQAGQTLAALLG 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ AI+K+P PK MRW + S +++RP+ ++ + A+ ++ +++ + Sbjct: 133 EIINTAIKKLPIPKVMRWGS-----STHTFVRPVHGLVVLHGAD-----VVPVNVLGLDS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 G T GHRF + I + D Y + + E+ V+ RR AI + +++ ++ + Sbjct: 183 GRQTLGHRFLSQGEIVLAQADDYAQQIAEQGKVIASFAKRRAAIKAELDKVSGSLNARVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D LL+E+ LVE+ V F+ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADDALLDEVTALVEYPVVLQAEFEAHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+ GN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTADP-SHIIHGNERVLRARLSDAEFFYKQDQK--------------------AT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L+ VV+H KIG+Q +R+ R++ + IA+ + D A +RA L+KADL T Sbjct: 342 LESRLPKLE--HVVYHNKIGSQAQRIDRLQTIAAHIAEQLGTDRATAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YAVL E AIE+H +PR + +P + I+ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYAVLDGEQPEIAAAIEQHYQPRFAGDKLPESPIATAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-------------PLSQFIED 531 TL+ W I P+G KDPYALRRA LG++R+++ + + I L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGVLRMLMNSPLSINDLLTTVAAQFPRDLLAANTV 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F RL + L + D D + A+L D L + D ++ + F + Sbjct: 520 TEVADFMQARLAVLLQN-DYAQDTVAAVLAQRPDRLDDLADKLQAVESFKKLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + + L +AE+ L+A +Q ++ + Sbjct: 579 ANKRVQNLLKKADAQLG----AVQENLLQEDAERALFAATQALRPTVQAALAKHDFQAAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L ++ ++ FFD V+V DD V+ NRL+LL + ++ V ++ Sbjct: 635 TALAAVKPQVDAFFDNVMVMADDAAVKQNRLNLLNELSQLMNAVADIS 682 >gi|296284056|ref|ZP_06862054.1| glycyl-tRNA synthetase, beta subunit [Citromicrobium bathyomarinum JL354] Length = 734 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 256/758 (33%), Positives = 371/758 (48%), Gaps = 90/758 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ SEEIPARMQ A +L + + GV + + TP RL L +GL Sbjct: 6 DFLLEMRSEEIPARMQAGARAELEKLFRREMDAAGVSMGEVTVWSTPRRLALIARGLPTE 65 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + EE GP VGA +A+DGF R + D +D K + Y AV+ P R + D Sbjct: 66 TQAVSEEAKGPPVGAPDQAVDGFCRKNNVT--RDQLEVRDVKGRETYFAVIDTPGRAVRD 123 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 VL +P I+ WPKSMRW + W+RPL I+ +L +++++ ++ Sbjct: 124 VLAEAIPAIIRDFAWPKSMRWGAASISTESMRWVRPLSGIVALL-----GDEVVECEVHG 178 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + G +T GHRFH I + D Y L A V++D + R I A R+AS GL Sbjct: 179 VTSGAVTLGHRFHHSGDITIGDADDYAVKLRAAHVIVDHQERAALIREGAARVASEAGLS 238 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 LVED+ L+ E GL EW +G F++ +L +P E I+LT + NQK FV +G LAN Sbjct: 239 LVEDEGLVVENAGLTEWPIPLLGRFEEDFLSVPPETIQLTARVNQKYFVCEDAQGTLANA 298 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 FI +NI+A+DGGAAIV GN +V+AARL DA FW+ DQ Sbjct: 299 FICTANIEAADGGAAIVDGNRKVLAARLSDARFFWEVDQK-------------------- 338 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI----------AQLIDADVAL-V 411 K L Q L + FH K+GT ++V R+ L + + A + ++A Sbjct: 339 KTLAQHAEGLKR--ITFHEKLGTVADKVERVAKLARWLVESDIVTPASAGVTKEELAQMA 396 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 + A L KADL TE+V EFPELQG +G YA + + DAI +H KP G + VPT Sbjct: 397 EDAAKLCKADLVTEMVGEFPELQGLMGGYYAGAEGLPDAVADAIRDHYKPVGQGDEVPTA 456 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-------- 523 +++ VSLADKLDTL F+ I E P+GSKDP+ALRRA GI+ + +EN + Sbjct: 457 PVTVAVSLADKLDTLFAFFMIQEYPTGSKDPFALRRAANGILSLTVENGLRFGIWGWSTF 516 Query: 524 -------PLSQFIEDQNLIL-FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 P + + +NL+ F DRLK+ + +RHDLI+A+ +D+ + ++ + Sbjct: 517 LKENSNYPEAAGVHPRNLLHQFLQDRLKVQQREAGVRHDLIDAV--RSDDDNVRLLARVH 574 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQ------------------ 617 L F + G+ L KR IL E+ + + + + Sbjct: 575 ALQSFMETEDGKNLLAGYKRAANILKKEDWQGVDDAPHTGEEDPLVMVDDPDMKDVVAAQ 634 Query: 618 --------------YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 Y AEK L + G ++ +R+ L S+ PI+ Sbjct: 635 MAEKSAHPSGKSLSYTPEPAEKALMDALDTAGPQAATAVREERFADAMSALASLRAPIDD 694 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FF+ V VN +++ R RL LL ++ + V + KI Sbjct: 695 FFENVTVNDENKTKRSVRLGLLARFRDAVHQVADFGKI 732 >gi|149191882|ref|ZP_01870116.1| glycyl-tRNA synthetase subunit beta [Vibrio shilonii AK1] gi|148834274|gb|EDL51277.1| glycyl-tRNA synthetase subunit beta [Vibrio shilonii AK1] Length = 688 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 198/703 (28%), Positives = 333/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK+ + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFESELKDADLAHEGVKWYAAPRRLALKVSAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVDQAERLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIIVELAAKALANLPIAKPMRWGDKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LEE V+ D + R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYDARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN + L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYSLDLTDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++++ F R + D D+I+A+L +K Sbjct: 505 AKSLFGDKLTNANVEEDVLEFMLGRFNAWYKDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKVLAENVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|84499656|ref|ZP_00997944.1| glycyl-tRNA synthetase beta subunit [Oceanicola batsensis HTCC2597] gi|84392800|gb|EAQ05011.1| glycyl-tRNA synthetase beta subunit [Oceanicola batsensis HTCC2597] Length = 739 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 263/763 (34%), Positives = 389/763 (50%), Gaps = 88/763 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL + L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAADLKSRMTDGLVEAGLTYGGAASFHTPRRLCLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GPRV A +KAI+GFLR G+ D Q++ D KKG VY+A++ +P R Sbjct: 61 TESPTLREERKGPRVDAPEKAIEGFLRGAGVAK-EDLQVR-DDKKGQVYVALIERPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW + + W+RPL SILCIL ++++ + ++L Sbjct: 119 AEIVAEVLTSVIRNFPWPKSMRWGSG-----SLKWVRPLHSILCIL-SDESGAATVPIEL 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + + T+GHRF AP V + Y L+ A V+LD + R + I DA LA A G Sbjct: 173 DGLTATDRTHGHRFMAPGAFSVTGFEDYTTKLKRACVVLDAQERADHIWQDATNLAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG D+++L LP E+++ ++K +QK F R Sbjct: 233 LEVVEDRGLLSEVAGLVEWPVVLMGDIDQEFLGLPPEVLQTSMKEHQKFFSVRNARTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V+AARL DA FW+ D Sbjct: 293 EKFITVANRETADDGATILAGNQKVLAARLSDARFFWENDLRIARTAG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 ++ +ARL +V FH K+G+Q R+ RI L + IA +DAD AL ++A ++KA Sbjct: 341 ----MEDWVARL--ANVTFHNKLGSQAARIDRIAALARDIAPTVDADPALAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A EEH P GP + VP+ +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPDQVARAAEEHYSPLGPSDAVPSAPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL---- 536 DK+D L FW+I+EKP+GSKDP+ALRRA LG+IR++L N + + L +F + Q L Sbjct: 455 DKIDLLTGFWSIDEKPTGSKDPFALRRAALGVIRLVLANGLRVDLDRFFDAQILRHRLSD 514 Query: 537 ------FFHDRLKLYLHDRDIRHDLIEAILRP------------------ENDNLLTIVD 572 D L + + + A+L D L D Sbjct: 515 GAAADQALLDDLLGKIAHHGMSGAPVRALLDSVEDAPGWLAAVSEHDPELGADLLAFFHD 574 Query: 573 LIK-----------HLNEFFSSAKGEKFL----------------------LSAKRIFQI 599 +K ++ + + KR I Sbjct: 575 RLKVHLRDEGIRHDVIDVAIAMPEKSDLALVVQRAEALSAFLRTEDGENLVQGFKRANNI 634 Query: 600 LAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 L E K+ P++ +E L+ + I+ +M + + L ++ Sbjct: 635 LTQAEDKDGVAYEFGADPKFAEDASETALFEALERVRPRIETAMAQEEFEAALSDLATLR 694 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN ++ VR NRL+LL I+ L V ++ ++ Sbjct: 695 APIDAFFEAVQVNAENEIVRRNRLNLLSTIRTTCLAVADLTRL 737 >gi|254230343|ref|ZP_04923729.1| glycyl-tRNA synthetase, beta subunit [Vibrio sp. Ex25] gi|262392774|ref|YP_003284628.1| glycyl-tRNA synthetase subunit beta [Vibrio sp. Ex25] gi|151937135|gb|EDN56007.1| glycyl-tRNA synthetase, beta subunit [Vibrio sp. Ex25] gi|262336368|gb|ACY50163.1| glycyl-tRNA synthetase beta chain [Vibrio sp. Ex25] Length = 688 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 199/703 (28%), Positives = 329/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKSAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AESQSDKIVEKRGPAVSAAFDAEGNPTKAAQGWARGCGISVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFVDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|58337480|ref|YP_194065.1| glycyl-tRNA synthetase subunit beta [Lactobacillus acidophilus NCFM] gi|227904116|ref|ZP_04021921.1| glycyl-tRNA synthetase beta chain [Lactobacillus acidophilus ATCC 4796] gi|81311456|sp|Q5FJU0|SYGB_LACAC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|58254797|gb|AAV43034.1| glycyl-tRNA synthetase beta chain [Lactobacillus acidophilus NCFM] gi|227868135|gb|EEJ75556.1| glycyl-tRNA synthetase beta chain [Lactobacillus acidophilus ATCC 4796] Length = 687 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 207/732 (28%), Positives = 347/732 (47%), Gaps = 77/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D+L EI +EE+PA + ++ L+ LKE G+ +++++ + TP RL + ++ L Sbjct: 1 MAKDYLFEIGTEEMPAHVVPRSVSQLADRTRKFLKENGLKFKDIKTFSTPRRLTILVEDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E + GP G KA GF R G+ T D ++ Y+ V Sbjct: 61 AEKQDDIDEVKKGPAKKIAQDADGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHV 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ K+ + +L + I+ + +P MRW + F ++RP+ ++ + Sbjct: 120 QKEGKKASDILLG--MSEIIKAMTFPTKMRWDSND-----FEFVRPIHWLVSLF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I + + +I G T GHRF + + + D Y L++ V+ + E R++ I+N Sbjct: 168 NEVIPVKILDITAGRKTEGHRFLG-DSVVLANADDYEDALKDQYVIANAEERKDMIVNQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L ++ D+DLLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 227 DELVKENHWQVKPDRDLLEEVTYLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L N FI V N D ++ GN +V+ ARL+DA F+ D+ Sbjct: 287 YDENGKLINHFIAVRNGN-KDYLDNVISGNEKVLVARLDDAQFFYDEDRKY--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 PL + RL DV FH KIG+ E+V R+R++G +A+ + +V Sbjct: 337 -----------PLSHFVDRLK--DVSFHDKIGSMAEKVQRVRMIGDYLAKRWNLPENVVK 383 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 DRA L K DL T++V EF ELQG +G YA L E+ AI+EH P +P Sbjct: 384 DFDRASELYKFDLVTQMVGEFAELQGVMGMHYARLAGEDEEVSVAIKEHYMPATAEGPLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ADK+DT+I F+ P+ S DPYALRR GI+RI+L K +P ++ + Sbjct: 444 ETTVGSLLSIADKIDTIITFFGAGMIPTSSNDPYALRRYAYGIVRILLNEKWSLPFNEVL 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 DQ + F DR+K YL ++D+I+A+L + I Sbjct: 504 PEIISLLNGVTPARLPKSDVDQEIADFIRDRVKQYLQKNKFKYDIIDAVLASSQQDPSQI 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + S RI IL + K ++E+ +EK LY Sbjct: 564 LAAANVLQLHHDDEEFKPVVESLTRIDNILKKAKFKG---NVEVDESLFEDNSEKELY-- 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 +Q + + + + I+ +FD ++ + +V++NRL+ L + Sbjct: 619 -----VGVQNLQEIESLADLYQGFVQLQPVIDQYFDVNMIMDKNEKVKNNRLAQLYAVSE 673 Query: 691 IILIVINVQKIV 702 + + N+ K+V Sbjct: 674 LADRLGNLSKLV 685 >gi|91228339|ref|ZP_01262267.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 12G01] gi|91188099|gb|EAS74403.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 12G01] Length = 688 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 198/703 (28%), Positives = 329/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|148359386|ref|YP_001250593.1| glycyl tRNA synthetase subunit beta [Legionella pneumophila str. Corby] gi|148281159|gb|ABQ55247.1| glycyl tRNA synthetase, beta subunit [Legionella pneumophila str. Corby] Length = 688 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 200/722 (27%), Positives = 359/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSAGNPTPALLGFAKSCGVTV--DALTKTQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 L-----GVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI +S+ +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNIASSNP-KQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+V+ ++Q ++ L +RA Sbjct: 338 -------QPLSAHIP--STEQVIFQVKLGSVYDKVQRIKVMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAVVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRMDTLVGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|328471247|gb|EGF42149.1| glycyl-tRNA synthetase subunit beta [Vibrio parahaemolyticus 10329] Length = 688 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 199/703 (28%), Positives = 329/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AESQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQADRMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASSRTIRGHRFMGEKEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDDNKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAEEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|269965270|ref|ZP_06179391.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 40B] gi|269830071|gb|EEZ84299.1| glycyl-tRNA synthetase beta subunit [Vibrio alginolyticus 40B] Length = 688 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 199/703 (28%), Positives = 329/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNENVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAEEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|307610542|emb|CBX00128.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila 130b] Length = 688 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 200/722 (27%), Positives = 364/722 (50%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ + +I+ D KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCGVTVDALTKIQTD--KGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V ++++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSLSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 L-----GVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AARLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + FI VSNI +S+ +V GN +V+ ARL DA F+K+D+ Sbjct: 292 YGELLHYFITVSNIASSNP-KQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 338 -------QPLSAHIP--STEQVIFQVKLGSMYDKVQRIKAMMNHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E + A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAAVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRIDTLVGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I Q + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEQLIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|28896795|ref|NP_796400.1| glycyl-tRNA synthetase subunit beta [Vibrio parahaemolyticus RIMD 2210633] gi|153839057|ref|ZP_01991724.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|260363493|ref|ZP_05776326.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus K5030] gi|260876552|ref|ZP_05888907.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|260897313|ref|ZP_05905809.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|260901407|ref|ZP_05909802.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|32130158|sp|Q87TP8|SYGB_VIBPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28805003|dbj|BAC58284.1| glycyl-tRNA synthetase, beta chain [Vibrio parahaemolyticus RIMD 2210633] gi|149747440|gb|EDM58394.1| glycyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|308087818|gb|EFO37513.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|308090379|gb|EFO40074.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|308107205|gb|EFO44745.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|308113553|gb|EFO51093.1| glycine--tRNA ligase, beta subunit [Vibrio parahaemolyticus K5030] Length = 688 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 199/703 (28%), Positives = 329/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AESQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQADRMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASSRTIRGHRFMGEKEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAEEIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|307292913|ref|ZP_07572759.1| glycyl-tRNA synthetase, beta subunit [Sphingobium chlorophenolicum L-1] gi|306880979|gb|EFN12195.1| glycyl-tRNA synthetase, beta subunit [Sphingobium chlorophenolicum L-1] Length = 736 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 264/768 (34%), Positives = 385/768 (50%), Gaps = 99/768 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ KA+EDL+ + L + G+ +++ + TP RL L + L Sbjct: 1 MTDFLLELRCEEIPARMQLKASEDLARLFTEELAKSGLKPESIDSFVTPRRLALIARNLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL D +D V+ A + KP R Sbjct: 61 LETAAVSEEHKGPRTSAPAQALEGFLRKTGLT--QDQLEDRDG----VWFATVNKPGRAS 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +P I+ PWPKSMRW + W+RPL+ I+ IL E+++D+++ Sbjct: 115 AEVLAEAIPTVIRAFPWPKSMRWGRASQTTESLRWVRPLQGIVAIL-----GEELVDIEI 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T GHRFH P I + Y L V+ + R++ I A A+A G Sbjct: 170 EGIRSGYATLGHRFHHPGEITIGGAHDYAEKLRACHVIASHQERQSIIEAKAAEAAAAHG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++EDK L+ E GL EW +G FD +L +P E+I+LT++ NQK FV R G LA Sbjct: 230 YTVIEDKGLVTENAGLTEWPVPLLGDFDPAFLEVPPEVIQLTLRINQKYFVLRDTSGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI+A DGGAAIV GN +V+AARL DA FW++D+ Sbjct: 290 PAFICTANIEAKDGGAAIVAGNRKVLAARLSDARFFWEQDRK------------------ 331 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL------------IDADV 408 L+ +L+ + FH K+GT ++V R+ L + + + Sbjct: 332 --TKLEDHAKKLER--ITFHEKLGTVADKVERVAKLARWLVEEDIIPPLPQAGGAGGGLA 387 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L ++A L+KADL TE+V EFPELQG +G YA + + DAI +H KP G ++V Sbjct: 388 DLAEQAARLAKADLVTEMVGEFPELQGIMGGYYARAEGLPDAVADAIRDHYKPVGQGDDV 447 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID----IP 524 PT +++ VSLADKLDT+++F+AI+EKP+GSKDP+ALRRA LG+I ++L+N++ +P Sbjct: 448 PTAPLTVAVSLADKLDTIVSFFAIDEKPTGSKDPFALRRAALGVISLLLDNRLRTKLALP 507 Query: 525 LSQFIEDQNL-----------------------------ILFFHDRLKLYLHDRDIRHDL 555 LS+ +E + + FF DRLK+ + +RHDL Sbjct: 508 LSKAVEAVEITEFLGALSAAAEQFKGEPFALSNILQPIVLDFFADRLKVQQKEAGVRHDL 567 Query: 556 IEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-------KKN 607 I+A+ D+L+ ++ +K L F ++ G L KR IL E K Sbjct: 568 IDAVFALGGEDDLVRLLARVKALQSFVATDDGTNLLAGYKRAANILKKEGIESPSAPAKA 627 Query: 608 REISLEISPQYLL-------------LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 S P L AE L A + S+ + + L Sbjct: 628 GAQSGAAHPNSELPPSQEHGSLTYTPEPAEAALIAALDAAEPRATASVAAEDFEAAMAAL 687 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ PI+ FF+ V VN D R RLSLL ++ + V + KI Sbjct: 688 ATLRAPIDAFFETVTVNDADEAKRSARLSLLARVRKAVHAVADFSKIT 735 >gi|53803631|ref|YP_114481.1| glycyl-tRNA synthetase subunit beta [Methylococcus capsulatus str. Bath] gi|53757392|gb|AAU91683.1| glycyl-tRNA synthetase, beta subunit [Methylococcus capsulatus str. Bath] Length = 693 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 221/722 (30%), Positives = 352/722 (48%), Gaps = 61/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L E+ +EE+P + K +E L + L++ G+ Y + Y TP RL L ++ L+ Sbjct: 6 DLLFELGTEELPPKSLLKLSEALKDHVAAGLEKAGLSYAGIEAYATPRRLALLVRRLAAA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ ER GP + GA KA +GF RS G+ T +K + KG+ V Sbjct: 66 QPDQTIERRGPALNAAYDAQGAPTKATEGFARSCGVTTDQLITLKTE--KGEWVGVVQEI 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R E ++ I+ A+ +P K MRW + + ++RP++ ++ + + Sbjct: 124 RGRSTEALIPDIIRQALTALPIAKRMRWGSGLA-----EFVRPVQWVVLLYGG-----TV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHR 234 ++ ++ + G T GHR HAP PI++ + Y L VL D RR I A Sbjct: 174 VECEILGVASGRTTRGHRCHAPDPIEITNPTEYAGLLTTRGHVLPDFGERRACIERLAVE 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ V + + D DLL+EI LVEW +G F+ +YL LP E++ T++ NQK F Sbjct: 234 TAATVNGKPLIDPDLLDEITALVEWPVPVLGGFEARYLSLPPEVLITTMQDNQKYFPVVD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI SNI + + +GN RVV RL DA FW +D+ Sbjct: 294 AEGGLLPHFITFSNIDSRRP-EFVREGNERVVRPRLADAEFFWNQDRK------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L++R+ L V F K+G+ ++ R++ L IA+ ++ D + V+RA Sbjct: 341 --------RTLEERVEELG--QVTFQNKLGSVLDKTRRVQQLAVFIAESLNVDPSFVERA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+KADL T +V EF ELQG +G+ YA+ + E AIEE P+ +P ++ Sbjct: 391 ALLAKADLLTHMVGEFTELQGLMGRYYALAEGEPYEVALAIEEQYLPKVSGGALPASRTG 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 ++LA+K+DTL +++ PSG +DPYALRRA LGIIRI++E ++D+ + +E Sbjct: 451 EILALAEKIDTLAGIFSVGLVPSGDRDPYALRRAALGIIRILIEKRLDLDVEVLLEKALN 510 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L+ F ++RL+ Y ++ RHD EA+L NL +D + + E Sbjct: 511 LLPHGFDPEATRSALLDFIYERLRGYCLEQGYRHDEFEAVLAIRPTNLADFLDRLAAVRE 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F E + KRI IL K + + L+ +EK L A I Sbjct: 571 FRGLTAAESLAAANKRIRNILR---KSGETVVANAEERILIEPSEKALLAAARQAHADIL 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y L + + ++ FFD V+V +D +R NRL LL ++ + L V ++ Sbjct: 628 PLLHARDYTTALCRLAQLRDCVDAFFDTVMVMCEDVSLRSNRLGLLALVEGLFLNVADIS 687 Query: 700 KI 701 + Sbjct: 688 TL 689 >gi|326387506|ref|ZP_08209114.1| glycine--tRNA ligase [Novosphingobium nitrogenifigens DSM 19370] gi|326208010|gb|EGD58819.1| glycine--tRNA ligase [Novosphingobium nitrogenifigens DSM 19370] Length = 668 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 262/704 (37%), Positives = 377/704 (53%), Gaps = 47/704 (6%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLE+ SEEIPARMQ +A DL + L+ G+ + + TP RL L + L Sbjct: 6 ADFLLELRSEEIPARMQAQARADLERLFRKELEAAGLTPGEVAVWSTPRRLALVARALPL 65 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 + EE GPR A +A++GFLR TGL +D ++D V+ AVL KP R Sbjct: 66 ATAAVSEELKGPRTSAPPQALEGFLRKTGLS--ADQLTERDG----VWFAVLEKPGRATV 119 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 DVL +P I+ PWPKS RW + W+RPL I+ +L E I+ ++ Sbjct: 120 DVLAAAIPAIIRAFPWPKSQRWGAASLSSESLRWVRPLSGIVALLGGE-----IVPCEVA 174 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I G T+GHRFH PI + ++ Y L A V++D R + + A + A+ GL Sbjct: 175 GIVAGRETFGHRFHHSGPIAIDGVEDYADKLRAAHVIVDHAEREATVRDGARKAATEAGL 234 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK F+ R G LAN Sbjct: 235 VLVEDEGLVIENAGLTEWPVPLLGRFDEAFLAVPPEVIQLTARVNQKYFICRDAAGKLAN 294 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+ +NI A DGG AIV GN +V+AARL DA FW++DQ Sbjct: 295 AFVCTANIVAKDGGEAIVAGNRKVLAARLSDARFFWEQDQK------------------- 335 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLS 418 PL Q+ +L + FH K+GT ++V+R+ L + +A+ + AD A A L Sbjct: 336 -TPLAQQAEKL--ARIKFHEKLGTVADKVARVADLAESLARDGVVPGADPAQARLAAELC 392 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G YA ++ + DA+ +H KP G ++VPT +++ ++ Sbjct: 393 KADLVTEMVGEFPELQGLMGGYYARVEGLPDAVADAVRDHYKPVGQGDDVPTAPVTVALA 452 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDTL +F+AI+EKP+GSKDP+ALRRA LG+IR+I +N + L + +L+ FF Sbjct: 453 LADKLDTLRSFFAIDEKPTGSKDPFALRRAALGVIRLITDNGLRFGLGE----GDLLAFF 508 Query: 539 HDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 DRLK+ + +RHDLI+A+L D+L+ ++ + L F ++ G L KR Sbjct: 509 ADRLKVQQREAGVRHDLIDAVLALGGEDDLVRLLARVHALQAFVATEDGVNLLAGYKRAA 568 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL E + + E L ++ G ++ + + L S+ Sbjct: 569 NILKKETWEPLPRNYEPDAAEAALA------EALAVAGPKADAAVAAEDFTGAMGALASL 622 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FFD V VN D R NRLSLL + + V + +I Sbjct: 623 RAPIDAFFDDVTVNDADAHKRANRLSLLDLFRAAVHKVADFSRI 666 >gi|227498772|ref|ZP_03928914.1| metal-dependent phosphohydrolase [Acidaminococcus sp. D21] gi|226904226|gb|EEH90144.1| metal-dependent phosphohydrolase [Acidaminococcus sp. D21] Length = 686 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 199/728 (27%), Positives = 332/728 (45%), Gaps = 70/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EE+PA+ ++ + LKE + ++ + Y TP R+ +G++ Sbjct: 1 MATLLYEIGTEEMPAQYMPGILKNYKELAETKLKEARIPFEKVSVYGTPRRMAFVAEGIA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP + G KA+ GF R G++ + K+ A+ Sbjct: 61 DRQEDMTAESKGPSLKIAFDADGNPTKAVQGFARGQGVEVSAL------EKRDGYVYAIK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L ++ + + +PK+MRW+ F ++RP ++ +L +E Sbjct: 115 HTKGGETKVLLPALLDDILHSLSFPKTMRWADYD-----FGFVRPFHWMVALLDSE---- 165 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I ++ ++ GN+T GHRF I + S + Y++ LEE +++D E RR I Sbjct: 166 -VIPVEANDVKSGNVTRGHRFLGSQTITIPSAEAYVKTLEENFIIVDVEKRRALIREQIE 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G +DLL+E+ LVE+ GS D KYL LP+E + ++ +Q+ F Sbjct: 225 ALGKKAGGHTAISEDLLDEVTYLVEYPTALCGSIDDKYLKLPKEAVITPMRDHQRYFPVL 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V N + + + GN RV+ ARL+DA+ F++ D+ Sbjct: 285 DDSGKLLPYFITVRNGNS-EHLDIVTHGNERVLRARLDDAVFFFENDRKKSLEAH----- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALV 411 R + DV F +G E+ R+ L + + AD + Sbjct: 339 -----------------REALHDVAFQRGMGNMYEKTERLEALTSCLLKESGVAADEKAL 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL T +V EF ELQG +G+EYA+L E + AI E PR + +P Sbjct: 382 VRAARLSKADLVTGMVTEFTELQGTMGREYALLDGEGDTVSTAIGEQYMPRFAGDELPQT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +++ADKLD + ++ E P+GS+DPYALRR LGI+ I+ + I L+ I++ Sbjct: 442 NEGRLLAIADKLDNITATFSRGEAPTGSQDPYALRRQALGILNIVTDGNIHFALTSAIKE 501 Query: 532 ----------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLI 574 +++ FF R K + DR +R+D+++A+L D+L Sbjct: 502 TLSRLPKTNQSEDKLVADIVEFFAQRSKNMMLDRGVRYDIVDAVLGAEGRDDLCDAFAAA 561 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L + + K + L + R+ I + +S L +AEK L+ + Sbjct: 562 DALTAYLGTDKAPETLQAFTRVENITKKSR-----VDAPVSEALLREDAEKALFEAVEKA 616 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + + + + S+ PI FFD V+V D V+ NRL+LL I+++I Sbjct: 617 AENVHGMLLSRDFAGVLTACDSLSAPINHFFDDVMVMDKDEAVKQNRLALLTKIRSLIGC 676 Query: 695 VINVQKIV 702 V +V +V Sbjct: 677 VGDVSLLV 684 >gi|148980110|ref|ZP_01815890.1| glycyl-tRNA synthetase subunit beta [Vibrionales bacterium SWAT-3] gi|145961411|gb|EDK26717.1| glycyl-tRNA synthetase subunit beta [Vibrionales bacterium SWAT-3] Length = 688 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 202/703 (28%), Positives = 333/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGANLAHEGVKWYAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQEDKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVEQADRLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ A+ Sbjct: 119 QEVKGQATSEIVVDLAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGAD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + G GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASGRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + +AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AEKAGAAVGGITELEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-HVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ LD +F ++GT ++ RI L IA+ IDADV Sbjct: 339 -----------RPLIDRLPELDQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR +++P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 IS V++ADKLDT++ + I + GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQATKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++I F R + + D D+I+A+L +K Sbjct: 505 AKELLGDKLTNDNVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLANRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L ++ Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAENVAVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L ++ EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLAALREPVDAFFDNVMVMADDEALKK 664 >gi|24371614|ref|NP_715656.1| glycyl-tRNA synthetase subunit beta [Shewanella oneidensis MR-1] gi|81845949|sp|Q8EKS6|SYGB_SHEON RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24345367|gb|AAN53101.1|AE015453_3 glycyl-tRNA synthetase, beta subunit [Shewanella oneidensis MR-1] Length = 688 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 205/695 (29%), Positives = 330/695 (47%), Gaps = 62/695 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL L + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLALNITELAIA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAGGKPTKAAEGWARGNGITVDQAERLVTD--KGEWLVYNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 123 EGVETKSLVAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNIRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + LLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDALLEEVTSLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 292 DAGKLLPNFIFVANIESKDP-AQIISGNEKVVRPRLADAEFFFNTDKKH----------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 340 ---------TLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGANLSNANASEEVLEFLMARFRAWYQDKGINVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + KR+ ILA K E+ ++ L AE+ L A +++ + Sbjct: 569 FRGLEASSALAAANKRVSNILA---KVEGELPSSVNVALLSEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 + Y Q LL S+ E ++ FF+ V+V DD Sbjct: 626 PLFANADYQQALTLLASLRESVDQFFEDVMVMADD 660 >gi|317128323|ref|YP_004094605.1| glycyl-tRNA synthetase subunit beta [Bacillus cellulosilyticus DSM 2522] gi|315473271|gb|ADU29874.1| glycyl-tRNA synthetase, beta subunit [Bacillus cellulosilyticus DSM 2522] Length = 700 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 209/734 (28%), Positives = 355/734 (48%), Gaps = 73/734 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M FL EI EE+PAR A L+ + L + + Y+ +++Y TP RL + + G Sbjct: 3 MSKQTFLFEIGLEEMPARFVTTAMNQLAEKVEKWLLDNRLNYEAVQRYSTPRRLAIKING 62 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L + EE GP G KA +GF R G+ ++SD K+ KG+ Y+ Sbjct: 63 LDDRQADIEEEAKGPSKKIAQDADGNWTKAAEGFARGQGV-SVSDLFFKE--IKGEEYVF 119 Query: 112 VLRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + ++L+ + VAI + +PK+MRW + F ++RP+K ++ + +E Sbjct: 120 VNKFMKGTATNELLQDLKEVAI-SLQFPKNMRWGSLQ-----FRYVRPIKWLVALYGSE- 172 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I ++ +P N+TYGHRF I + + Y L V+ DPE R+ AI + Sbjct: 173 ----VIPFEIAHVPSSNVTYGHRFLGEE-ITLSEANEYENLLLSQYVIADPEQRKEAIRS 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + G + D+DLLEEI LVE+ +G+FD+++L +P +++ +++ +Q+ F Sbjct: 228 QVKYIGEQEGYVIPVDEDLLEEINNLVEYPTSLIGNFDERFLMVPSDVLITSMREHQRYF 287 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + G L FI V N + +GN +V+ ARL DA F++ D Sbjct: 288 PVKDSNGNLLPHFITVRNGDHR-HLENVQKGNEKVLRARLADAEFFYEED---------- 336 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---AD 407 L +PLD + RL+ +V+H ++G+ G++V RI+ L A+ + Sbjct: 337 ----------LKQPLDANLERLE--SIVYHEELGSIGDKVRRIQGLATTFAEWNGLNEEE 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + V R LSKADL T +V EFPEL+G++G+EYA E+ I EH P+ + Sbjct: 385 LKTVLRVAQLSKADLVTHMVGEFPELEGRMGEEYARKSGEDEKVAQGIYEHYLPKQAGDQ 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + VS+ADK+DT++ ++I P+GS+DP+ LRR T G+I+I L NK I + Sbjct: 445 LPKTSVGALVSVADKVDTIVTSFSIGLIPTGSQDPHGLRRQTAGVIQIFLANKWKINVLD 504 Query: 528 FIED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 ++ + L+ F R+K L D+ IR+D+++A++ + + Sbjct: 505 VFKEALQLAEKHGLLKRDKETVLEELVEFIKLRVKNILQDKGIRYDIVDAVMNTDIGEIT 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 T+VD L + +K + + R+ I +K ++++ +AEK L+ Sbjct: 565 TLVDKANVLQSKINETSFKKLVEAFSRVTNI---AKKAKDNQHMDVNDSLFTEKAEKDLF 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + + + + D L + I +FD V+V DD ++ NRL+ + Sbjct: 622 KMNAAVSKQMNDLLKSGNVEAAFDELKQLEPYIHDYFDHVMVMTDDTALKTNRLNQMNEA 681 Query: 689 KNIILIVINVQKIV 702 +I Q IV Sbjct: 682 AKLITQFAEFQSIV 695 >gi|296107432|ref|YP_003619132.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|295649333|gb|ADG25180.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila 2300/99 Alcoy] Length = 688 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 199/722 (27%), Positives = 358/722 (49%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ D K KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSAGNPTPALLGFAKSCGVTV--DALTKTQTDKGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V +++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSQSLESLPIAKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 L-----GVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI VSNI +S+ +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLPYFITVSNIASSNP-KQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+V+ ++Q ++ L +RA Sbjct: 338 -------QPLSAHIP--STEQVIFQVKLGSVYDKVQRIKVMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAVVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SL D++DTL+ +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLVDRMDTLVGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA ++++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYADKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|94498278|ref|ZP_01304838.1| Glycine--tRNA ligase [Sphingomonas sp. SKA58] gi|94422280|gb|EAT07321.1| Glycine--tRNA ligase [Sphingomonas sp. SKA58] Length = 772 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 262/804 (32%), Positives = 387/804 (48%), Gaps = 135/804 (16%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ KA++DL+ + L + G+ + + TP RL L + L Sbjct: 1 MTDFLLELRCEEIPARMQVKASDDLARLFADELAKAGLKPSAIDSFVTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A+DGFLR TGL D ++D V+ AV+ KP R Sbjct: 61 LETAAVSEEFKGPRTSAPAQALDGFLRKTGLT--QDQLEERDG----VWFAVVNKPGRAA 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL VP I+ PWPKSMRW + W+RPLK I+ IL E+++D+++ Sbjct: 115 ADVLAQAVPAVIRAFPWPKSMRWGAASQTTESLRWVRPLKGIVTIL-----GEQLVDIEM 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + + G T GHRFH P I + Y+ L V+ + R+ I A A+A G Sbjct: 170 EGLRSGYATLGHRFHHPGEITIGGAHDYLEKLRACHVIASHQERQAIIAAKADEAAAAHG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++EDK L+ E GL EW +G FD +L +P E+I+LT++ NQK FV R +G LA Sbjct: 230 YSVIEDKGLVAENAGLTEWPVPLLGDFDPAFLEVPPEVIQLTLRINQKYFVLRDTDGNLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI A DGGAAI+ GN +V+AARL DA FW++D+ Sbjct: 290 PAFICTANIDAKDGGAAIIAGNRKVLAARLSDARFFWEQDRK------------------ 331 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK--------------------- 399 L +L+ + FH K+GT ++V R+ L + Sbjct: 332 --TSLADHAKKLER--ITFHEKLGTVADKVERVAKLARWLVEEGIVGASAPAKAGAQGDE 387 Query: 400 ---------IAQLIDADVA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENI 449 + + A++A L ++A L KADL TE+V EFPELQG +G YA ++ Sbjct: 388 AQPNSGLLPLQEHCGAELATLAEQAARLCKADLVTEMVGEFPELQGVMGGYYARAEDLPD 447 Query: 450 SCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRAT 509 + DAI +H KP G ++VPT +++ VSLADKLDT+ +F+ I+EKP+GSKDP+ALRRA Sbjct: 448 AVADAIRDHYKPVGQGDDVPTAPVTVAVSLADKLDTITSFFGIDEKPTGSKDPFALRRAA 507 Query: 510 LGIIRIILENKIDIPLSQFIEDQNL----------------------------------- 534 LGII+++++N + + L I + Sbjct: 508 LGIIQLVIKNDLRLRLLDLIIYVSRGNEGDFTQRFVFEDNFRDWLKAGGEGDLAAVNGIL 567 Query: 535 --------ILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAK 585 + FF DRLK+ + +RHDLI+A+ D+L+ ++ +K L F ++ Sbjct: 568 LRGNGLALLDFFADRLKVQQKEAGVRHDLIDAVFAIGGEDDLVRLLARVKALQSFVATDD 627 Query: 586 GEKFLLSAKRIFQILAIEE---KKNREISLEISPQYLL---------------------- 620 G L KR IL + R LE ++ Sbjct: 628 GANLLAGYKRAANILKKDAPDLSSARHPGLEPGSRFFDDAEGSGTPDQVRGDDAADALSY 687 Query: 621 --LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVR 678 AE L + +++ +R+ L ++ PI+ FFD V VN D + R Sbjct: 688 TPEPAEADLITALDAAEPRAAQAVAEERFEDAMAALATLRAPIDAFFDSVTVNDPDPDKR 747 Query: 679 DNRLSLLQYIKNIILIVINVQKIV 702 +RL+LL +++ + V + KI Sbjct: 748 ASRLALLARVRDAVHNVADFSKIA 771 >gi|85708600|ref|ZP_01039666.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. NAP1] gi|85690134|gb|EAQ30137.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. NAP1] Length = 683 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 251/717 (35%), Positives = 360/717 (50%), Gaps = 52/717 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ A ++L + ++ GV N+ + TP RL L + L Sbjct: 1 MADFLLELRCEEIPARMQAGARKELDKLFRREMEAAGVAVGNLTIFSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP VGA +A+DGF R G+ S + ++ K + AV+ KP + + Sbjct: 61 KETEAVREEAKGPPVGAPDQAVDGFCRKNGVTRESLEE--REVKGRATWFAVIEKPGQAV 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L +P I WPKSMRW + W+RPL I+ +L E ++ Sbjct: 119 ADLLAAAIPAIISDFSWPKSMRWGDASISSESTRWVRPLSGIVALLDGE-----VVPCVT 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G +T GHRFH+ I + D Y L + V++D E R N I A A+ G Sbjct: 174 DGMASGRVTMGHRFHSDGGIPIDDADDYAPRLRDEYVIVDHEERANIIREGASNAAADAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L+LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK FV +G LA Sbjct: 234 LKLVEDEGLVIENAGLTEWPVPLLGRFDEAFLDVPPEVIQLTARVNQKYFVCEDADGELA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FI +NI + D +V GN +V+AARL DA FW+ DQ Sbjct: 294 NAFICTANIASVDPTG-VVDGNRKVLAARLADARFFWELDQK------------------ 334 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVALVDRAIVL 417 K L + L+ + FH K+GT ++V R+ L + A+ + D L A L Sbjct: 335 --KTLAEHAKGLER--ITFHEKLGTVADKVDRVAKLASWLVFDAKEPNGDHQLTRTAAEL 390 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SKADL TE+V EFPELQG +G YA + + DA+ +H KP G ++VPT ++ V Sbjct: 391 SKADLVTEMVGEFPELQGLMGGYYAQKEGQPQEVADAVRDHYKPVGQGDDVPTAPTTVAV 450 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 SLADKLD L++F+ I+ P+GSKDP+ALRRA LG IR++ N + + L Q + Sbjct: 451 SLADKLDNLLSFFKIDILPTGSKDPFALRRAALGYIRLVQANGLKLSLDQVVHAWDSQPN 510 Query: 531 ---DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE---NDNLLTIVDLIKHLNEFFSSA 584 + L F HDRL + L D +RHD I A + + + + L F S Sbjct: 511 QSLAEKLTEFLHDRLAVQLRDEGVRHDFIRASRDWSGSIDMRIDRVEARARALTRFLGSD 570 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 G L KR IL EE + +E+S AEK L I+ +++ Sbjct: 571 DGTNLLAGYKRAANILKKEEWEAKEVSYSP------EPAEKALIDAINAAAPKAAAAVNE 624 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +R+ L ++ PI+ FFD+V VN D+ R RL LL + + V + +I Sbjct: 625 ERFEDAMAALATLRAPIDAFFDEVTVNDDNENKRAARLDLLARFTSAVGQVADFSRI 681 >gi|116749873|ref|YP_846560.1| glycyl-tRNA synthetase subunit beta [Syntrophobacter fumaroxidans MPOB] gi|116698937|gb|ABK18125.1| Glycine--tRNA ligase [Syntrophobacter fumaroxidans MPOB] Length = 694 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 226/722 (31%), Positives = 348/722 (48%), Gaps = 67/722 (9%) Query: 6 LEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPE 65 +EI EEIPA A E +S + L E V TP RL L + +S Sbjct: 11 IEIGCEEIPAGYIAPALESMSRQMTRFLDENRVGRGEPHVTGTPRRLILSIPDVSTQQEA 70 Query: 66 KIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 E +GP A +A +GF R G+ TI D +IK+ P +G+ + + Sbjct: 71 CTTEIIGPPKQAAFDAGGKPTRAAEGFARGQGV-TIEDIRIKETP-RGEYLFILREESGS 128 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 +L+ ++P I +P+PKSMRW+ + ++ RP++ I+ +L E +DL Sbjct: 129 ATRALLEKMLPDFIAHIPFPKSMRWAGL-----SVTFARPVRWIVALLGRET-----LDL 178 Query: 179 DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + +I G+ GHRF +P + V D + R+L + V+ + R+ I A Sbjct: 179 EYGDIRSGDKAMGHRFMSPEWLTVTDYDSHTRNLAKHYVIAEIAERKKLIAEKIREAAVG 238 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 VG ++ED++LL+E+ +VE+ + +G F++KYL LP EL+ IK +Q+ F +G Sbjct: 239 VGGGILEDEELLDEVTQIVEYPEPIVGEFEEKYLELPPELLITVIKKHQRYFAVTDTDGK 298 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L F+ V+N D + GN RVV ARLEDA +++ DQ Sbjct: 299 LLRYFVTVANTIPRDPR-LVAAGNGRVVRARLEDARFYYREDQKV--------------- 342 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALVDRAIVL 417 LD R+ +L VVFH+K+GT E+ R L + + + I D + + RA L Sbjct: 343 -----RLDDRVEQLK--GVVFHSKMGTSWEKKERFTALARWLGERIAPDRLETLLRAAHL 395 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KADL T +V EFPELQG +G+ YA LQ E + AI EH P ++P + Sbjct: 396 CKADLVTGMVGEFPELQGVMGRAYARLQGEPEAVAAAIFEHYLPNRAGGSIPEGMEGALL 455 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 S+ADK+DT+ + + PSG+ DP+ALRR TLGI+RIILE + L + I+ Sbjct: 456 SVADKMDTIAACFGVGLNPSGTADPFALRRQTLGILRIILEKSFRLSLCELIDKALPLLA 515 Query: 533 ------------NLILFFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ FF RL YL + DL+EA L D+ + V K L Sbjct: 516 DKLTVPPETARKDVLEFFRGRLLHYLVSQEGYAADLVEATLAVGIDDPVDAVARTKALVA 575 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + E + KR+ I+ E +L + P+ L E+ L+ +SD + Sbjct: 576 FKARPDFESLAAAFKRVANIIKEPE------TLPVEPELLQTAPEQALFGALSDTEGIVN 629 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 E++ Y + + + ++ FFD VLV D VR NRL+LL I+++ V + + Sbjct: 630 EALARSDYDAALEAMSRLRGFVDAFFDSVLVMDKDERVRRNRLALLTRIRDLFSGVADFR 689 Query: 700 KI 701 KI Sbjct: 690 KI 691 >gi|332991514|gb|AEF01569.1| glycyl-tRNA synthetase subunit beta [Alteromonas sp. SN2] Length = 692 Score = 716 bits (1848), Expect = 0.0, Method: Composition-based stats. Identities = 207/722 (28%), Positives = 350/722 (48%), Gaps = 58/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + E + L + + ++ + P RL +Y+ L+ Sbjct: 5 NCLIELGTEELPPKALKSLGEAFAQQFEAALTAAELSFTSVSWFAAPRRLAVYVSALAES 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +K E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 65 QADKTVEKRGPAVSAAFDTDGNPTKAAQGWARGNGISVEDAERLVTD--KGEWLLHKAHV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + I ++L +++ AI K+P PK+MRW + +IRP+ ++ + +E + Sbjct: 123 PGKQIGELLASLLNQAIAKLPIPKAMRWGNYTT-----QFIRPVHTLTALYGSE-----V 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++L + G GHRFH ++ D+Y LE V+ D R++ + Sbjct: 173 VNLTALGLASGRTIQGHRFHGEARFELDHADNYASALEAHYVVADFTARKDKVRQQLQTA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+ L+ ++DLLEEI LVEW V SF++ +L +P+E + T+K +QK Sbjct: 233 ADALSLKPDFNEDLLEEIASLVEWPVVMQASFEEGFLAVPKEALIYTMKDDQKYVPLLDS 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L+N F+ VSNI++ D ++ GN +V+ RL DA F+ D+ Sbjct: 293 EGQLSNTFLFVSNIESQDPIQ-VISGNEKVIRPRLADAEFFFNSDKK------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+A L+ V+F ++GT E+ RI L IA IDA+ AL RA Sbjct: 339 -------TSLESRLASLE--SVLFQKQLGTLKEKSERISSLSGFIASQIDANEALAARAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL T +V EFP++QG +GK YA+ E+ + +A+ E PR + +P+ +S Sbjct: 390 LLAKTDLMTNMVMEFPDVQGVMGKYYALNDGEDAAVAEALYEQYMPRFAGDALPSPGVSA 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LADKLDTL+ + I + P G KDP+ALRRA +G++RII E + + L + Sbjct: 450 AVALADKLDTLVGIFGIGQLPKGDKDPFALRRAAIGVLRIITELSLPLDLEVLVAKAGEV 509 Query: 531 ----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ F R L D+ I D+I+A+ V + + EF Sbjct: 510 YGDKLSNQDFQAQVVDFVLARFVAVLQDQGIAIDVIQAVSARRPTQPSDYVARVNAVAEF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA + + ++ I L +AEK LY+ + + + Sbjct: 570 KQLEEAQALAAANKRVANILAK-QGVDSSVNASIDESLLSEDAEKALYSALMSAESVVTS 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ + Y +I + ++ I+ FFD V+V +D V+ NRL+LL ++ + L ++ Sbjct: 629 AVTTQDYTKILSTMATLRSAIDSFFDDVMVMAEDDAVKQNRLALLSLLRQLFLTTADISL 688 Query: 701 IV 702 + Sbjct: 689 LA 690 >gi|255319852|ref|ZP_05361057.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SK82] gi|262380383|ref|ZP_06073537.1| glycyl-tRNA synthetase beta subunit [Acinetobacter radioresistens SH164] gi|255303171|gb|EET82383.1| glycyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SK82] gi|262297829|gb|EEY85744.1| glycyl-tRNA synthetase beta subunit [Acinetobacter radioresistens SH164] Length = 689 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 201/718 (27%), Positives = 345/718 (48%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKTLRDALQAETVKGLKDAGLAFDSIEAYAAPRRLALKIVNVDGAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP V G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGISIDQVSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + +++I+ Sbjct: 125 QSLDVLLPQILQTALDHLPVAKRMR-----SAASRTEFVRPVKWVVLLK-----DDQVIE 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ N+TYGHRFHAP I + + D Y+ L A V+ E R+ I LA Sbjct: 175 ATIQDHTAANVTYGHRFHAPDAITLANADAYLDALRAAKVVASFEERQAIIDQQVKALAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DL +E+ LVEW SF++++L +P+E + T++ NQK F + Sbjct: 235 EVNAIAIVPADLRDEVTSLVEWPVALRASFEERFLAVPQEALITTMQDNQKYFCLVNSDH 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESK-APKQIIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT ++ RI +L ++ + A VA +RA +L Sbjct: 339 -----QPLASRSEKL--ANMVFQAQLGTLWDKTVRIAMLAVELTKFTGAQVADAERAAML 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SK DL +E+V EFPELQG G YA L+ EN +A+ E P+ + +P K T+ Sbjct: 392 SKCDLTSELVGEFPELQGIAGTYYARLEGENDEVAEALGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL--- 534 +LAD+LDTL+ + I + P+GSKDP+ALRR+ +GI+R+I+EN +++ + + Sbjct: 452 ALADRLDTLVGIFGIGQAPTGSKDPFALRRSAIGILRLIIENNLNVTIEALVNSALHAYG 511 Query: 535 -------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + F R + D+ ++ D+I+A+ + L + +N F Sbjct: 512 ALITDPNKTRSVAVAFLEGRYRAKYEDQGVQVDVIQAVQAMSPASPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A ++ ++ Sbjct: 572 NLPEAAALAAANKRVANILAKEAAPEGS----VVEANLVEDAEKALFAELAKITPVVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 K Y L ++ P++ FFD V+V DD E++ NRL +L ++++ V ++ Sbjct: 628 FAAKDYTAALSALAALRVPVDAFFDGVMVMADDAELKANRLRMLAQLRDLFTKVADIS 685 >gi|54294727|ref|YP_127142.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Lens] gi|53754559|emb|CAH16043.1| glycyl-tRNA synthetase beta chain [Legionella pneumophila str. Lens] Length = 688 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 200/722 (27%), Positives = 362/722 (50%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF+ E+ EE+P+ A + S L+ L + + Y ++++ TP RL + + L Sbjct: 4 DFIFELGCEELPSGAVWPLANEFSTRLLAALDKAQLSYGEVKRFATPRRLAIVIHDLQTE 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + R GP G A+ GF +S G+ + +I+ D KG+ + + Sbjct: 64 QESQKVMRRGPAAIAAYDSEGNPTPALLGFAKSCGVTVDALTKIQTD--KGEWIVFETQS 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +D+L +V ++++ +P K MRW + RP+ + + +E KI Sbjct: 122 EGTKTKDLLPGLVSLSLESLPITKPMRWGEGDD-----EFARPVHWAVMLYGSETLNHKI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHRFH P I++ S Y +++A V+ D RR AI++ L Sbjct: 177 L-----GVTSGCHSRGHRFHHPQEIRINSAASYEDQMKDAFVIADFATRRQAIIHQVQEL 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ +G +V ++L++E+ +VEW Q + +F++++L +P E + +++++QKCF + + Sbjct: 232 AAPLGASVVMPEELVDEVTSIVEWPQALIANFEQEFLEVPAEALIASMQSHQKCFALKNK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L + FI VSNI +S+ +V GN +V+ ARL DA F+K+D+ Sbjct: 292 HGELLHYFITVSNIASSNP-KQVVLGNEKVMRARLSDAAFFFKQDKK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 +PL + V+F K+G+ ++V RI+ + ++Q ++ L +RA Sbjct: 338 -------QPLSAHIP--STEQVIFQVKLGSMYDKVQRIKAMMDHLSQSLNLPSHLAERAT 388 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T +V EFPELQG +G YA+ E A+ E PR +++P+ + Sbjct: 389 LLSKCDLMTGMVGEFPELQGIMGYYYALNDGEEAIVATALNEQYMPRFSGDDLPSTDLGK 448 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 +SLAD++DTL +AI +KP+G KDP+ LRR L ++R+++ + LS I++ Sbjct: 449 ALSLADRIDTLAGIFAIGQKPTGVKDPFKLRRHALAVVRLLISISAPLNLSTLIKEALAN 508 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 L F +RL+ Y ++ I DL+ A+ ++D L + + L Sbjct: 509 YGDRLPQDKNLVAELKPFILERLQSYYQNQGISADLVHAVRARQDDWLYDLDKRLFALKS 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + KR+ ILA N+++ +I + + AEK L+ ++ ++ Sbjct: 569 FITMPEATSLSAACKRVGNILAQAAYANKKV--DIKEELIEEGAEKALFDHLNKITKTVE 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + LL S+ EP++ FFD V+V V++ ++ NRL+LLQ ++ ++ V ++ Sbjct: 627 TLYIAGDYQALLKLLASLKEPVDAFFDHVMVMVEEESLKQNRLALLQRLQELLQGVADIS 686 Query: 700 KI 701 + Sbjct: 687 ML 688 >gi|260426987|ref|ZP_05780966.1| glycyl-tRNA synthetase, beta subunit [Citreicella sp. SE45] gi|260421479|gb|EEX14730.1| glycyl-tRNA synthetase, beta subunit [Citreicella sp. SE45] Length = 740 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 263/764 (34%), Positives = 395/764 (51%), Gaps = 89/764 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL ++ L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKLVTNGLVEAGLTYSGAAAFSTPRRLTLAVEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+V A KAI+GFLR G+ T C++++D KKG V AV+ KP R Sbjct: 61 AASPATREERRGPKVDAPGKAIEGFLRGAGV-TREQCEVRED-KKGAVLYAVIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ ++ PWPKSMRW + W+RPL ILC+L E A +++ L++ Sbjct: 119 AEIVAEVLETTVRNFPWPKSMRWGAG-----SLRWVRPLHRILCVLTTE-AGAEVVPLEI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G IT GHRF P +V S + Y L+ + V+L PE R I +DA A A G Sbjct: 173 DGIWAGKITQGHRFMGGAPFEVTSFEDYETKLKRSKVILSPEERAETIWHDATNRAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VED+ LL E+ GLVEW V MG + +L LP E+++ ++K +QK F + Sbjct: 233 LEVVEDRGLLAEVSGLVEWPVVLMGKIGEDFLDLPPEVLQTSMKEHQKFFSVKNPASGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D GA I+ GN +V++ARL DA FW+ D Sbjct: 293 EGFVTVANVETADDGATILAGNDKVLSARLSDAKFFWENDLRVAKQDG------------ 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L+ ARL +V FH K+G+Q +R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 341 ----LEAWTARL--ANVTFHNKLGSQKDRIDRIAALAREIAPMVGADAGLAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA A +EH P GP ++VPT +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPAEVAAACQEHYSPLGPSDDVPTAAVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF-- 538 DKLDTL FWAI+EKP+GSKDPYALRRA LG+IR++L N + + L + ++ Q L Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLANGLRLHLDRLVDAQLLRHQITT 514 Query: 539 -----HDRLKLYLHD-----------------------------RDIRHDLIEAILRPEN 564 L L + + D+ + ++ + Sbjct: 515 DGNKDAAMLDDLLSEIAHHGVFGSAARTIIEQARSDAPSWLPVVENHAPDVSDDLVAFFH 574 Query: 565 DNLLTIVD----LIKHLNEFFSSAKGEKF----------------------LLSAKRIFQ 598 D L + ++ + + + KR Sbjct: 575 DRLKVYLRDEGIRHDVIDAVLAMPNRDDLALVVARARALMEVLNTEDGANLVQGFKRANN 634 Query: 599 ILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL E+K+ E S ++ E EK L+A + I+ +M + + + ++ Sbjct: 635 ILTQAEEKDGVEYSFGADVKFAETEEEKALFAALDTADASIKPAMASEEFAAAMTAMAAL 694 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FF+ V VN ++ VR NRL+LL I++ L V ++ ++ Sbjct: 695 RGPIDAFFEAVQVNAENAVVRRNRLNLLSRIRHTCLQVADLTRV 738 >gi|119503578|ref|ZP_01625661.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2080] gi|119460640|gb|EAW41732.1| glycyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2080] Length = 694 Score = 715 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 209/719 (29%), Positives = 336/719 (46%), Gaps = 60/719 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D L E+ +EE+PA AE L ++ L G+ Y + + + TP RL + + G+S Sbjct: 6 ADLLFELGTEELPAGPLATMAEALGSSILDGLTHHGLEYGSSKIFATPRRLAVLVAGVSL 65 Query: 62 HSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P+K E LGP V A A GF + G+ I+ KGD Sbjct: 66 VAPDKTVEALGPPVTAARDKQGDWTPAALGFAKKQGVDVTDLTVIEAS--KGDRLGVRRT 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + VL I+ A+ +P K MRW ++RP++ +L +L + Sbjct: 124 ESGARAVAVLPEILANAVASIPVTKRMRWGRER-----HEFLRPIQWVLALL-----DTQ 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +ID+ + I T GHRFH I + S Y L A VL D + RR I + Sbjct: 174 VIDVVIMGITSDRQTLGHRFHHREAITLASPAKYEETLLAAYVLADFDLRRERIRSQVVA 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A + V D+ LL E+ GLVEW GSFD +L +P + ++K +QK F + Sbjct: 234 IADGLQANAVIDETLLNEVTGLVEWPVALQGSFDPAFLEVPAGAVISSMKEHQKYFHLVS 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI +SNI++ + A+++ GN RV+ RL DA F++ D+ Sbjct: 294 NEGDLLPLFITISNIES-NRPASVIAGNERVIRPRLSDAAFFFETDK------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + PL R +RL+ +VF K+G+ ++ RI L IA+ + AD+ + +A Sbjct: 340 -------ATPLADRGSRLE--GIVFQQKLGSVADKTRRIVALSSWIAEALGADIGVTQKA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL T++V EFP+LQG G YA E+ S AIEEH PR + +P + + Sbjct: 391 ATLAKCDLVTDLVLEFPDLQGIAGAHYAHHDGESESVASAIEEHYWPRFSGDQLPNSAEA 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LAD+LDTL+ + I + P+GSKDP+ALRR L +IR+++ + L + Sbjct: 451 SAVALADRLDTLVGIFGIGQAPTGSKDPFALRRGALAVIRLLVNLDSPLTLLDLAQRAVR 510 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + +R + + D++I +++ A+L + + LN Sbjct: 511 EYPENLLDSDTAAAVTEYTLERFRSWYDDQNIAVEVLRAVLATGITGPAEVDRRVSALNV 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + KR+ IL+ K + P AEK+LY + + Sbjct: 571 FAGTEAAIALAAANKRVANILS---KSGETRAGTPMPNLFDQPAEKQLYETLEGLKAGVA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +++ Y L ++ P++ FF++V+VN DD +RDNR LL ++N + + Sbjct: 628 KNISAGDYAAALSKLATLQAPVDSFFEEVMVNADDSAIRDNRHELLAALRNAFTGIADF 686 >gi|269962698|ref|ZP_06177043.1| glycyl-tRNA synthetase beta subunit [Vibrio harveyi 1DA3] gi|269832621|gb|EEZ86735.1| glycyl-tRNA synthetase beta subunit [Vibrio harveyi 1DA3] Length = 688 Score = 715 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 197/703 (28%), Positives = 328/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R + ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCDITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR + +P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDELPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +Q++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|257869134|ref|ZP_05648787.1| glycyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803298|gb|EEV32120.1| glycyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 696 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 215/734 (29%), Positives = 352/734 (47%), Gaps = 78/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI EE+PA + + + L L + + ++ Y TP RL +Y+ G+ Sbjct: 7 MAQNLLLEIGLEEMPAHVVTPSMKQLQQKTAEFLTAHALQFSSIEAYSTPRRLAVYVTGI 66 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R GL T + I G Y+ V Sbjct: 67 PESQADTQEEVKGPAKKIAIDADGNWSKAAQGFVRGQGLTTDA---ITFKELNGVEYVYV 123 Query: 113 LRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +VL + I + +P +M W+ F +IRP+ I+ + AE Sbjct: 124 TKHIQGKPALEVLTG-LKEVITSLVFPVTMHWANFD-----FEYIRPIHWIVALFGAE-- 175 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++ + ++ + GHRF + ++ D Y+ +E V+ DP R+ I++ Sbjct: 176 ---VVPFTVLDVVTDRKSRGHRFLGEE-VTFETADDYLSQMERQFVIADPSKRQQLIVDQ 231 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A + D+DLLEE+ LVE+ F+G FD+KYL +PEE++ ++K +Q+ F Sbjct: 232 IDAIAKENNWRIDLDEDLLEEVNNLVEYPTAFVGDFDEKYLSVPEEVLVTSMKEHQRYFD 291 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 RT EGVL FI N +V+GN +V+ ARLEDA F+ D+ Sbjct: 292 VRTPEGVLLPHFISARNGDLV-KIDNVVKGNQKVLTARLEDAEFFYNEDKKL-------- 342 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 +DQ + +L V FH KIG+ E++ R+ V+ + I + L + + Sbjct: 343 ------------TIDQCVEKLK--QVTFHEKIGSLYEKMQRVAVIAQIIGETVELSEDER 388 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G++YA+LQ E AI EH P + Sbjct: 389 TELKRASEIYKFDLVTNMVGEFPELQGVMGEKYALLQGETPQVAQAIREHYMPVSAEGAL 448 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +++ADKLD+L++F+A+ PSGS DPYALRR T GIIRII E + PL++ Sbjct: 449 PESSVGAILAIADKLDSLLSFFAVGMIPSGSNDPYALRRQTYGIIRIIAEKRWYFPLARL 508 Query: 529 IE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 E + +I F RL+ +L ++IRHD+IEA++ ++ Sbjct: 509 QEKIRTAINEQPSVYGIQLNEGQEQVIDFVDGRLRQFLATKNIRHDVIEAVINSRQGDIS 568 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + L + + + + + R+ + + +++ +I+P+ E+E LY Sbjct: 569 LLFEAAQMLRAHLNDSDFKPSMEALTRVINLAKKADLEHK----QINPELFENESENTLY 624 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + + Y L S+ IE +FDQ +V VDD +R NR +LL I Sbjct: 625 EAVVAIEDKFPQQTMEQNYQS----LVSLRPLIEAYFDQTMVMVDDEAIRRNRFALLDKI 680 Query: 689 KNIILIVINVQKIV 702 + L V ++ +V Sbjct: 681 AKMSLAVASLDALV 694 >gi|169830681|ref|YP_001716663.1| glycine--tRNA ligase [Candidatus Desulforudis audaxviator MP104C] gi|238688220|sp|B1I1T4|SYGB_DESAP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169637525|gb|ACA59031.1| Glycine--tRNA ligase [Candidatus Desulforudis audaxviator MP104C] Length = 688 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 331/726 (45%), Gaps = 68/726 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D +LEI +EEIPAR A +L+ LL E + Y ++ Y TP RL LY++ L+ Sbjct: 3 ADLVLEIGTEEIPARFLPPALAELAEKGRALLAEYRLAYADLAAYGTPRRLTLYVRDLAG 62 Query: 62 HSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++E GP A KA GF RS G+ + D + VY AV + Sbjct: 63 DQAPLVQEIKGPPKKAAFDIDGVPTKAALGFARSQGVA-VEDLVTRAVGPVEYVY-AVRQ 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L + P I + +P+ MRW F ++RP++ ILC+ ++ Sbjct: 121 ETGRPAAEILAELGPRLIGALVFPRPMRWGDQD-----FRFVRPIRWILCV-----HGDR 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I+ + + G T+GHRF + + V + Y LEE V++DP RR + Sbjct: 171 VIEFTVAGVRSGPHTWGHRFLSAGRLLVTTAGDYFTLLEENFVIVDPARRREMVWEQVRA 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A + +D +LL E+ L+E+ F G F + YL LPE ++ ++ +Q+ F R Sbjct: 231 AAAAESGTVADDPELLAEVADLLEYPSAFCGCFPESYLELPEPVLVTPMREHQRYFPVRD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L F+ V N ++ I GN +V+ ARL DA F++ D Sbjct: 291 GTGRLMPFFVGVHNG-TAEHLNLIRSGNEKVLRARLADAAFFFRED-------------- 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALV 411 L PL R L VVF +GT E+V R+ L ++ + D A Sbjct: 336 ------LEVPLPDRGPELK--KVVFQESLGTMHEKVERLTALAGYLSSALGLDETERAQA 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA VLSK DL T +V EFPELQG +G+EYA+ E + +AI E P E +P Sbjct: 388 HRAAVLSKNDLLTSMVYEFPELQGIMGREYALRAGEAPAVAEAIREQYLPAPGGEELPAT 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + + ++LAD+ D L+ + + +P+GS+DPYALRR LGI ++L+ + L F + Sbjct: 448 RAGLVLALADRADNLVGAFGMGVQPTGSQDPYALRRQALGICHLLLDTPAYLDLDDFFRE 507 Query: 532 -----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L FF RL++ DR + + ++EA L + ++ + Sbjct: 508 AYAAYGGRLTVEAGEVAAQLADFFGQRLRVLFQDRGLSYGVVEAALAAGHADVRDAWERA 567 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F S + R + + P E LY Sbjct: 568 TAVATFQSHPAFADISTAFTRANNLAKNA------AGTRVEPALFKDPVEHTLYQAFLQV 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + +RY L + EP++ FFD V+V V++ VR+NRL+LL+ + ++ Sbjct: 622 REQVEAQIARRRYGAALAALAELREPVDRFFDGVMVMVEEAAVRENRLALLRLVADLFKG 681 Query: 695 VINVQK 700 + ++ K Sbjct: 682 IADLSK 687 >gi|260774987|ref|ZP_05883887.1| glycyl-tRNA synthetase beta chain [Vibrio coralliilyticus ATCC BAA-450] gi|260609077|gb|EEX35236.1| glycyl-tRNA synthetase beta chain [Vibrio coralliilyticus ATCC BAA-450] Length = 688 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 201/703 (28%), Positives = 332/703 (47%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGADLAHEGVKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEGQADKVVEKRGPAVSVAFDADGNATKAAQGWARGNGITVEQADRLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQATSEIVVDLAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF ++S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIESAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN ++ L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYNLDLTDLIAK 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++I F R + + D D+I+A+L +K Sbjct: 505 AKSLFGDHLTNDNVEADVIDFMLGRFRAWYQDAGFSVDIIQAVLANRPTKPSDFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAADIDLSLLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y Q L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQQALSKLADLREPVDSFFDNVMVMADDEALKK 664 >gi|156972784|ref|YP_001443691.1| glycyl-tRNA synthetase subunit beta [Vibrio harveyi ATCC BAA-1116] gi|166227931|sp|A7N1D8|SYGB_VIBHB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|156524378|gb|ABU69464.1| hypothetical protein VIBHAR_00449 [Vibrio harveyi ATCC BAA-1116] Length = 693 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 198/708 (27%), Positives = 328/708 (46%), Gaps = 68/708 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSQIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSHENGDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK---- 343 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ +F ++GT ++ RI L IA+ I A Sbjct: 344 ----------------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+N +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L Sbjct: 446 ELPSNGVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLV 504 Query: 527 QFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + +Q++I F R + + D D+I+A+L Sbjct: 505 DLVAKAKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 669 >gi|325686028|gb|EGD28086.1| glycyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 688 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 211/731 (28%), Positives = 351/731 (48%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVMVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF R G+ D ++ Y+ V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSA-DDIYFEELKGVEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K E +L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 122 AGKEAKEILLG--LDEVIKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKDMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVNSHNWQIKLDTSLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L N FI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINYFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + R+D V FH KIG+ E+++R+R++G +A+ +VA Sbjct: 337 ---------PLSHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYARLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL + + + P +E+ LY + Sbjct: 566 AAAKVLQQHHDDKAFKPVVESLTRIANILKKAKFSQ---ASSVDPSLFEDRSEQDLYNGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + K + ++ + ++ I+ +FD ++ D V++NRLS L + ++ Sbjct: 623 EALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|325295561|ref|YP_004282075.1| Glycyl-tRNA synthetase beta subunit [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066009|gb|ADY74016.1| Glycyl-tRNA synthetase beta subunit [Desulfurobacterium thermolithotrophum DSM 11699] Length = 690 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 231/727 (31%), Positives = 375/727 (51%), Gaps = 69/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI EE+PA A + L L L++ + + + TP RL L + Sbjct: 5 NLLLEIGCEELPASFIKPALDFLKTELSKRLEDAFLKPSEIETFGTPRRLILLAYDIPEV 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 P++ E +GP V G KA GF RS G+ ++ K Y+A+ + Sbjct: 65 QPDREELLVGPSVKAAFDSEGNPTKAAIGFARSKGVAVEELIKVSNPLGKKGEYVAIKKL 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +++L I+P I +P+ KSMRW + + RP++ IL + E Sbjct: 125 VKGKPAKEILALILPQLILSIPFKKSMRWGSKK-----VRFGRPIRWILAVYGRE----- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ ++ I NI+YGHRF P+ +V++++ +I LEE V+ D E R++ IL+ + Sbjct: 175 IVTFEVDGIKSSNISYGHRFLTPNGFEVENVNEFINGLEEKFVVADIEKRKSIILDVSET 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA VG EL++D+DLLEE+ LVE+ +GSFDK++L LP+E+ + +K +QK F Sbjct: 235 LAKKVGGELLKDEDLLEEVTNLVEYPYPILGSFDKEFLNLPKEVPIVVMKDHQKFFSVVD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L N FI +SNI+ +D + I +G +V+ ARL+DAL F+ D+ Sbjct: 295 NDGNLKNYFIGISNIKPAD-ESVIRKGYEKVLRARLKDALFFFNEDRK------------ 341 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVD 412 K L++R+ +L+ +VFH K+GT ++ R+ +L +A+ V+ Sbjct: 342 --------KTLEERVPQLN--GIVFHEKLGTMFDKTKRLELLAPFVAESTGKGRVKEKVE 391 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA +LSKADL TE+V EFPELQG +GK YA+L E+ S AIEE PR + V + Sbjct: 392 RAALLSKADLLTEMVNEFPELQGTMGKYYALLDGEDESVATAIEEQYFPRFSGDVVARGE 451 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + I++SL++K+D LI F+ + +P+GS DPY+LRR +G+I+ ILEN+I + L + Sbjct: 452 VGISLSLSEKIDNLIGFFGVGIRPTGSADPYSLRRNAIGLIQTILENRIHLNLLPVFQKA 511 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 Q ++ F +R K+ L +R + D IEAIL D+L + I+ Sbjct: 512 KEIYEDLGLKLSESAPQEVLEFVKERFKVLLRERGFKIDTIEAILSI-TDDLYDALLRIE 570 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + S + E L++ +R+ I+ + ++ P + E LY Sbjct: 571 AIETLRKSEEFENVLVTLRRVVNIIPKGFEA-----VDFEP---EGKYETELYEKFLLIK 622 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + + K Y + L+ + ++ FF+ V+V D V++ RLSLL+ I N +L + Sbjct: 623 EKLSKLISSKNYREALLLIKELKPFVDAFFENVMVMDKDENVKNRRLSLLKTIANELLSI 682 Query: 696 INVQKIV 702 + KI Sbjct: 683 ADFSKIA 689 >gi|300812194|ref|ZP_07092636.1| glycine--tRNA ligase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496830|gb|EFK31910.1| glycine--tRNA ligase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 688 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 211/731 (28%), Positives = 349/731 (47%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF R G+ D ++ Y+ V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSA-DDIYFEELKGVEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K E +L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 122 AGKEAKEILLG--LDEVIKSMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R+ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKAMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVNSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L N FI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINYFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + R+D V FH KIG+ E+++R+R++G +A+ +VA Sbjct: 337 ---------PLSHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYARLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + +D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQEAEEDKQLADFIRDRIKQFLQKNNYLYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL + + + P +E+ LY + Sbjct: 566 AAAKVLQQHHDDEAFKPVVESLTRIANILKKAKFSQ---ASPVDPSLFEDRSEQDLYNGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + K + ++ + ++ I+ +FD ++ D V++NRLS L + ++ Sbjct: 623 EALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|134093652|ref|YP_001098727.1| glycine tRNA synthetase subunit beta [Herminiimonas arsenicoxydans] gi|133737555|emb|CAL60598.1| glycine tRNA synthetase, beta subunit (Glycine--tRNA ligase beta chain) (GlyRS) [Herminiimonas arsenicoxydans] Length = 708 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 217/728 (29%), Positives = 367/728 (50%), Gaps = 59/728 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L LK +G++ + + Q+ +P RL ++L + Sbjct: 12 KNLLIELFVEELPPKALKKIGDAFAQLLQASLKTQGLLSTDSVLTQFASPRRLGVHLTQV 71 Query: 60 SPHSPEKIE-ERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLA 111 + + +K ++L P G A+ L + G + +K++ K +V Sbjct: 72 AEQADDKQVMQKLMPASVGLTADGKATPALLKKLSALGANESAVAGLKRESDGKAEVLFF 131 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + D L+ + + K+P PK M + +++RP ++ + A+ Sbjct: 132 NSIVTGVTLADGLQKALEETLAKLPIPKVMGYQLADG-WETVNFVRPAHGLVALHGAD-- 188 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 +I++ + GN T GHRF A P+ ++ D Y + + E V+ RR I+ Sbjct: 189 ---VINVSALGLTAGNTTRGHRFEAGLDPVYIRDADSYAKQIATEGAVIASFAERRAEIV 245 Query: 230 NDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 AS G L +ED+DLL+E+ GLVE V +G F++ +L +P+E + LT+K NQ Sbjct: 246 RQLAAAASEAGDNLTPIEDEDLLDEVTGLVERPNVLIGQFEETFLAVPQECLILTMKANQ 305 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F +G L+N F++VSNI+ +D + ++ GN RVV RL DA F+ +D+ Sbjct: 306 KYFPLLDSKGNLSNKFLIVSNIRPADA-SLVIGGNERVVRPRLADAKFFFDQDRK----- 359 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 K L R+A LD VV+H K+GTQGER++R+R + + IA + D Sbjct: 360 ---------------KTLASRVAGLD--KVVYHNKLGTQGERIARVRAIAQAIAAKLGID 402 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V D A L+KADL T++V EFPELQG +G+ YA+ + DAIE+H KPR + Sbjct: 403 VQQADTAAQLAKADLLTDMVGEFPELQGIMGRYYALHDGLAENVADAIEDHYKPRFAGDT 462 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P N + + V+LADKL+TL+ ++I + P+G KDP+ALRR LG+IR+++E K+DI +++ Sbjct: 463 LPRNPVGMVVALADKLETLVGLFSIGQIPTGDKDPFALRRHALGVIRMLIEGKLDIGINE 522 Query: 528 FIEDQNL-------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 I I F DRL L ++ I+A+L + L + + Sbjct: 523 LIAAAEQPFNKLAIEHRDALITFIFDRLANALREQGYSAQEIDAVLALQPQKLADVASRL 582 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + F + + KR+ IL +K E++ ++ P L AE L ++ Sbjct: 583 AAVRAFAVLPEAPALAAANKRVGNIL---KKVEGEVTAKVDPALLKEAAEIALNQTLTTV 639 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + Y +L ++ P++ FF+ V+VN DD +R+NRL LL + + + Sbjct: 640 KPQADTAFARGDYAASLQVLAALKTPVDAFFESVMVNADDAALRNNRLGLLATLHHAMNQ 699 Query: 695 VINVQKIV 702 V ++ K+ Sbjct: 700 VADISKLA 707 >gi|146329175|ref|YP_001209611.1| glycyl-tRNA synthetase, beta subunit [Dichelobacter nodosus VCS1703A] gi|229470696|sp|A5EV43|SYGB_DICNV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|146232645|gb|ABQ13623.1| glycyl-tRNA synthetase, beta subunit [Dichelobacter nodosus VCS1703A] Length = 689 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 202/719 (28%), Positives = 353/719 (49%), Gaps = 61/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+EI +EE+P R + A + + +L + + + + TP RL ++ L+ Sbjct: 5 TLLIEIGTEELPTRAVTELASAGAQLWDNVLTTALIPHGEIEAFGTPRRLAWRVRQLAVK 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ ER GP + A KA GF S G+ + +KG + K Sbjct: 65 QTDQKIERKGPSLQAAKDKNNAWTKAALGFAASCGVDVEQLA--IETTEKGQWLIFRGEK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + D+L + + K+P K MRW ++RP+ ++L + A + + Sbjct: 123 MGENVADLLPDLFAEVMDKLPIAKRMRWGDCDHA-----FVRPVHNLLVL-----ADDNV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 DL+ + +++ GHR H P+ ++ Y DLE A V++D E R N I L Sbjct: 173 WDLEFFGVASQHLSQGHRVHHAEPVAIRHAKTYEADLEAAYVIVDHETRCNRIREQVQAL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + + L++E+ L EW G+FD+ +L +P E++ T++ +QK F Sbjct: 233 ARDLGGKALMPEALVKEVASLTEWPIAIAGAFDRSFLKMPPEVLITTMQDHQKTFAVMDT 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V+N+++ + + +GN +V+ R DA FW++D Sbjct: 293 LGTLLPYFIAVANLESRN-EEEVRKGNEKVIRPRFADAEFFWQQD--------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L +PL+ + +L+ V++ K+GT E+ R++ + ++ + AD V A Sbjct: 337 -----LKRPLEDYLPQLER--VIYQEKLGTLAEKTRRVQTIACELTAMTAADKNSVYTAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+K+DL T +V+EFPELQG +G+ YA+ Q + A+EE P + +P + I Sbjct: 390 RLAKSDLQTAMVQEFPELQGVMGRYYALHQGLSAEVAQALEEQYFPTAAGDKLPQTAVGI 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 T+S+A+KLDTLI ++I +P+GSKDPYALRR +G+IR+++E K+ + L+ ++E Sbjct: 450 TLSIAEKLDTLIGGFSIGAQPTGSKDPYALRRMAIGLIRLLIEKKVPLLLTPWLEKAAGQ 509 Query: 533 ------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 ++ + +RL+ Y +++I ++++A+L DNL+ I ++ L F Sbjct: 510 FHDALGAKNFVMDVRAYILERLQAYYREQNIAPEIVQAVLALNGDNLVDIDQRVRALAPF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 +S F SAKRI IL KKN + L AEK L+ + Sbjct: 570 SNSDAALSFFASAKRIRNIL----KKNGTQQTAVRTDLLQESAEKHLWQQWEQMHNALLA 625 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ Y L S+ EP+E FF QV+V ++ +V+ NRL+LL ++ ++ ++ Sbjct: 626 AVSAGNYETALQQLGSLAEPLEAFFAQVMVMTENPDVQINRLALLTALQKGFELIADLS 684 >gi|254512072|ref|ZP_05124139.1| glycyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium KLH11] gi|221535783|gb|EEE38771.1| glycyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium KLH11] Length = 731 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 279/756 (36%), Positives = 404/756 (53%), Gaps = 82/756 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL + L E G+ Y + TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAGEDLKKRITEGLVEAGLTYASAAALTTPRRLTLAIEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+VGA KA++GFLR GL + +D KG VY A + K R Sbjct: 61 AESPTIREERKGPKVGAPDKAVEGFLRGAGLTRDQLEE--RDTPKGPVYFATIEKTGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW W+RPL SILCIL +++A +++ L++ Sbjct: 119 AEIVAEVLEATIRNFPWPKSMRWGRG-----TMRWVRPLHSILCIL-SDEAGAQVVPLEV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G+ T GHRF AP V S ++Y L+ A V+L P R I NDA +A A G Sbjct: 173 EGIASGDTTEGHRFMAPARFAVTSFENYATKLKHAFVMLSPSERAEHIWNDAQNMAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V MG D ++L LP E+++ ++K +QK F + + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLMGQIDDEFLDLPPEVLQTSMKEHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + SD GA I+ GN +V++ARL DA FW+ D Sbjct: 293 ERFVTVANRETSDNGATILAGNQKVLSARLADAKFFWENDLRIA---------------- 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 LD + +D+ +V FH ++GTQ ER+ RI + +A++ D A +L+KA Sbjct: 337 ---KLDMTVWTIDLQNVTFHNQLGTQAERIERIAAVAGALAEVTGVDARQAKDAALLAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +++V EFPELQG +G+ Y EEH P GP ++VPT +S+TV+LA Sbjct: 394 DLSSQMVYEFPELQGLMGRYYLEAAGMRAELAAVAEEHYSPLGPSDDVPTAPLSVTVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL---- 536 DKLDTL +FWAI+EKP+GSKDP+ALRRA LG+IR+IL N + + L + IL Sbjct: 454 DKLDTLTSFWAIDEKPTGSKDPFALRRAALGVIRLILTNDLRLSLKETFASALRILLKLP 513 Query: 537 -------------------------------------------------FFHDRLKLYLH 547 FFHDRLK++L Sbjct: 514 EWQAALLDAKAKQATAEDKDAAAQQVHGLAHQVEAANALVASVPGDLLSFFHDRLKVFLR 573 Query: 548 DRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 D IRHD+I+A + ND+L +V + LN ++ GE + KR IL+ E+K Sbjct: 574 DEGIRHDIIDACIAMDGNDDLNLLVKRARALNAVIATEDGENLVQGFKRANNILSQAEEK 633 Query: 607 NR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + E S ++ ++EK L+A + I +++ + + + ++ P++ FF Sbjct: 634 DGVEYSYGPDIKFAETDSEKALFAALDGAQAKIDLALEAEDFPTAMTAMAALRAPVDAFF 693 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + V VN D+ +R NRL+LL I+ I V ++ KI Sbjct: 694 EDVQVNSDNDILRRNRLNLLNQIRQICADVADLTKI 729 >gi|315640640|ref|ZP_07895746.1| glycyl-tRNA synthetase beta subunit [Enterococcus italicus DSM 15952] gi|315483668|gb|EFU74158.1| glycyl-tRNA synthetase beta subunit [Enterococcus italicus DSM 15952] Length = 693 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 215/733 (29%), Positives = 357/733 (48%), Gaps = 76/733 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L+EI EE+PA + + L + +E+ + Y N+R Y TP RL + ++ + Sbjct: 4 MAKDVLIEIGLEEMPAHVVVPSMNQLEAKVATFFEEQHLSYDNIRAYSTPRRLAVLIEAV 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R GL T D K+ VY Sbjct: 64 PERQADIEEEIKGPAKKIALDAEGNWSKAAQGFVRGQGLTT-DDITFKELNGVEYVYATK 122 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K+ I+ + + I + +P +M W+ F +IRP+ ++ + Sbjct: 123 KTTGKQTIDVLTG--LKEVITSLTFPVTMHWNKYD-----FEYIRPIHWVVALF-----G 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ ++ + GHRF H + + Y+ L E V+ D R+ I+N Sbjct: 171 EEVIPFEILDVKTDRHSRGHRFLG-HEVTFKRAHDYVETLAEQSVIADSAERQQLIVNQI 229 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A ++ D+DLLEE+ LVE+ F+G+F K+YL +PEE++ ++K +Q+ F Sbjct: 230 SAIAEKNKWQVFLDEDLLEEVTNLVEYPTAFVGNFAKQYLEIPEEVLVTSMKEHQRYFDV 289 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 RT +G L FI V N +++GN +V+ ARLEDA F++ DQ Sbjct: 290 RTEDGQLLPHFISVRNGN-DVAIENVIKGNEKVLTARLEDAEFFYQEDQKL--------- 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 + + +L V FH KIG+ E+++R+ V+ + I + + A++ Sbjct: 340 -----------TIAACVEKLK--HVAFHEKIGSIYEKMTRVGVIAQIIGETVGLSSAELT 386 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E S AI EH P +P Sbjct: 387 DLQRASEIYKFDLVTNMVDEFPELQGIMGEKYALLQGEKASVAAAIREHYLPIASEGELP 446 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + +++ADKLD+++ F+A PSGS DPYALRR T GIIRII + P + Sbjct: 447 KSVVGSVLAIADKLDSVLTFFAAGMVPSGSNDPYALRRQTYGIIRIIEAKQWHFPFEKLQ 506 Query: 530 --------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 E+ + F RL+ +L RDIRHD+IEA+L E ++ Sbjct: 507 RAIQEKINEDQATYGIMLSDENNLVSDFLKARLRQHLASRDIRHDVIEAVLASEQKDVSR 566 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + +++ + + + + + R+ + +E KN + I P+ EAEK L+ Sbjct: 567 LFQAAELVSQHLADQEFKPSMEALTRVMNLAKKQETKNSD----IQPELFENEAEKALFE 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +++ + + + Y L ++ IE +FDQ +V VDD +R NRL+LL I Sbjct: 623 AVTEVEANFATNTMAENYQ----ALVALHPAIEAYFDQTMVMVDDASIRANRLALLAKIS 678 Query: 690 NIILIVINVQKIV 702 ++L + ++ ++V Sbjct: 679 KMVLAIASLDQLV 691 >gi|197104831|ref|YP_002130208.1| glycyl-tRNA synthetase, beta subunit [Phenylobacterium zucineum HLK1] gi|238690133|sp|B4R9A9|SYGB_PHEZH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|196478251|gb|ACG77779.1| glycyl-tRNA synthetase, beta subunit [Phenylobacterium zucineum HLK1] Length = 669 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 251/695 (36%), Positives = 383/695 (55%), Gaps = 44/695 (6%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AA DL + L EG++ + ++ + P RL L +GL ++ EE G Sbjct: 13 IPARMQAQAARDLERLARERLAAEGLLPEALKTFAGPRRLTLVAEGLPAAQADRREELKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P+VGA ++A++GFLR TGL D +++D V+ A + KP R +++ +V + Sbjct: 73 PKVGAPEQALEGFLRKTGLT--RDQLVERDG----VFFATIEKPGRPTPEIVAEMVEAIL 126 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 + PWPKSM T S W+RPL+ ILC+ E ++ ++ I G+++ GH Sbjct: 127 RTFPWPKSMVSGT-----SKLRWVRPLRRILCVFDGE-----VVPFEVDGIASGDLSEGH 176 Query: 193 RFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLE 251 RF + P V+ + Y L V+LD + R+ IL A L A LELVED LL+ Sbjct: 177 RFMSDGQPFLVKDFEGYAAGLSHRSVVLDADERKERILEAAKTLCFARNLELVEDAGLLD 236 Query: 252 EIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVLANCFILVSNIQ 310 E+ GLVEW +G D +L LP E+IR +++ +Q+ F R G LA F+ V+NI Sbjct: 237 EVAGLVEWPVPVLGDMDPAFLDLPPEVIRTSMRVHQRYFAVRDPAGGKLAPHFLTVANIA 296 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 A DGGA I +GN++V++ARL DA FW D+ L+ R+ Sbjct: 297 ARDGGATIAKGNAKVLSARLSDARFFWDEDRKV--------------------RLEDRLE 336 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLCTEIV 427 +L V FHAK+GT ERV RI L ++A + + +A L+KADL + +V Sbjct: 337 KLK--GVTFHAKLGTMYERVQRIEALAGELAPFVRDEPETRTKAVQAARLAKADLVSGVV 394 Query: 428 REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLI 487 EFPELQG +G YA + + DAI H +P+GP + VP + ++ TV+LADKLDTL+ Sbjct: 395 GEFPELQGIMGGYYAEAEGLDPEVVDAIRSHYRPQGPNDAVPVSSVAATVALADKLDTLV 454 Query: 488 NFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLH 547 +F+ I EKP+GS+DP+ALRRA LG+IRI+LE + +PL +F+ D+ ++ FF DRL + L Sbjct: 455 SFFGIGEKPTGSRDPFALRRAALGVIRIVLETRTRLPLKRFVSDE-VLDFFADRLAVLLR 513 Query: 548 DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN 607 ++ RHDL+ A+ +D+L+ IV ++ L+ F + G L KR IL EEKK Sbjct: 514 EQGKRHDLVAAVFALGDDDLVRIVARVEVLSAFLKTEDGANLLAGYKRAVNILRAEEKKG 573 Query: 608 REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 + E + E L ++ + +++ + + L + P++ FFD+ Sbjct: 574 PLPAGEPAQAAGAPAEEAALVQAVAALDARLGPALEREDFEGAMTELAKLRGPVDAFFDK 633 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 VLVN D R+NRL LL +++ + V + ++ Sbjct: 634 VLVNSDVPAERENRLRLLAKVRDAMGRVADFSQVT 668 >gi|153835124|ref|ZP_01987791.1| glycyl-tRNA synthetase, beta subunit [Vibrio harveyi HY01] gi|148868396|gb|EDL67510.1| glycyl-tRNA synthetase, beta subunit [Vibrio harveyi HY01] Length = 693 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 199/708 (28%), Positives = 330/708 (46%), Gaps = 68/708 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKVVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQAERMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSHENGDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK---- 343 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ +F ++GT ++ RI L IA+ I A Sbjct: 344 ----------------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEKIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+N +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L Sbjct: 446 ELPSNGVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLV 504 Query: 527 QFIE---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + +Q++I F R + + D D+I+A+L Sbjct: 505 DLVAKAKSLFGDRLTNDNVEQDVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V VDD ++ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMVDDEALKK 669 >gi|87200127|ref|YP_497384.1| glycine--tRNA ligase [Novosphingobium aromaticivorans DSM 12444] gi|87135808|gb|ABD26550.1| glycyl-tRNA synthetase beta chain [Novosphingobium aromaticivorans DSM 12444] Length = 738 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 256/766 (33%), Positives = 374/766 (48%), Gaps = 99/766 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLE+ SEEIPARMQ A DL + L G+ + + TP RL L + L Sbjct: 4 ADFLLELRSEEIPARMQAGARADLEKLFRKELDAAGLKAGEVTVWSTPRRLALIARALPL 63 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 + EE GPR A ++A++GFLR TGL D ++D V+ AV KP R Sbjct: 64 ATEAVSEEVKGPRTSAPEQALEGFLRKTGLT--RDQLTERDG----VWFAVTEKPGRATR 117 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 DVL VP I+ PWPKS RW + W+RPL I+ IL + +++ ++ Sbjct: 118 DVLAEAVPAIIRAFPWPKSQRWGAASLSTESLRWVRPLSGIVAIL-----GDDLVECEIG 172 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 + G T GHRFH P I + S Y L V++D R + + A A A GL Sbjct: 173 AVKSGYATRGHRFHCPGEITIGSAHDYADKLRACHVIVDHVEREAMVRDKAKAAAEAAGL 232 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK F+ R G LAN Sbjct: 233 VLVEDEGLVIENAGLTEWPVPLLGRFDEAFLDVPPEVIQLTARVNQKYFICRDSAGKLAN 292 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+ +NI+A DGGAAIV GN +V+AARL DA FW++D+ Sbjct: 293 AFVCTANIEAKDGGAAIVDGNRKVLAARLSDARFFWEQDKK------------------- 333 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLS 418 KPL ++ +L + FH K+GT ++V R+ L + +A + + D AL +A L Sbjct: 334 -KPLAEQAQKLSR--ITFHEKLGTVADKVQRVVKLAEWLASEGIVPNCDPALARQAAELC 390 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G YA + + DAI +H KP G ++VPT +++ V+ Sbjct: 391 KADLVTEMVGEFPELQGLMGGYYARAEGLPDAVADAIRDHYKPVGQGDDVPTAPVTVAVA 450 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------- 525 LADKLDTL+ F+ I+++P+GS+DP+ALRRA LG++ ++ + + + Sbjct: 451 LADKLDTLVGFFLIDQRPTGSRDPFALRRAALGVLELLNWGSLRVSMWEAIAKALAAFTK 510 Query: 526 -----------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNL 567 +Q L FF DRLK+ + +RHDLI+A+ D+L Sbjct: 511 QLVSDDMAEASYEAFQTNQKAVFTTLPDFFADRLKVQQREAGVRHDLIDAVFALGGEDDL 570 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-----------EISLEISP 616 + ++ + L F + G L KR IL E + E P Sbjct: 571 VRLLARVHALQAFVGTEDGTNLLAGYKRAANILKKEGFAANPNAGSEGEGVVPPTGEEDP 630 Query: 617 QYLL---------------------LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 L+ AE+ L + + +++ + + +L Sbjct: 631 LVLVDDPAMEGVVAQFSHPECNYQREPAEQALVDALDYAEPAARGAVESEDFDFAMRVLA 690 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 S+ PI+ FFDQV VN D R +RL+LL + + V + +I Sbjct: 691 SLRAPIDSFFDQVTVNDADANKRSSRLALLDRFRAAVHKVADFSRI 736 >gi|221135260|ref|ZP_03561563.1| glycyl-tRNA synthetase subunit beta [Glaciecola sp. HTCC2999] Length = 689 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 191/700 (27%), Positives = 334/700 (47%), Gaps = 60/700 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + + L + + Y ++ +P RL + + GL+ Sbjct: 5 TLLIELGTEELPPKSLKTLGTAFGTNIQKELDDSQLAYSEVKWLASPRRLAVLVSGLAYQ 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G KA G+ R G+ ++ D KG+ L + Sbjct: 65 QADSVVEKRGPAVSAAFDAEGNPTKASMGWARGNGIDVADAERLVTD--KGEWLLYKAQV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +++ IV ++ K+P PK MRW ++ + +IRP+ + + +KI Sbjct: 123 TGQALDGLIEGIVSRSVTKLPIPKMMRWGSSDT-----QFIRPVHTFTAMY-----GDKI 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++P N+ GHRFH P ++ D Y+ + V++D R I ++ Sbjct: 173 LPATILDMPSNNVIQGHRFHGPATFTLEHADQYVEMCRKHFVVVDYAEREAQIAAGLNKQ 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +GLE ++ LLEEI LVE+ V SF++++L +P+E + T+K +QK Sbjct: 233 ADTLGLEADYNQALLEEIASLVEFPVVLQASFEERFLAVPKEALIYTMKDDQKYVPLLDG 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L++ F+ VSNIQ+S +++GN +V+ RL DA F+ D+ + Sbjct: 293 QGQLSSTFLFVSNIQSS-APQHVIEGNEKVIRPRLADAEFFFNTDKKH------------ 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L R+ L ++F ++GT E+ RI + IA I+A+ RA Sbjct: 340 --------SLASRLESLQ--SILFQKQLGTLAEKARRIEHVAAHIAVAINANAEHAARAG 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+K DL TE+V EFP++QG +GK YA+ E+ S AI E PR +N+P++ +S Sbjct: 390 LLAKTDLMTEMVMEFPDVQGVMGKYYALHDGEHESVAQAIAEQYMPRQSGDNLPSSDVSA 449 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 V+LADKLDTL + I P G KDP+ALRRA++G++RII E D+ + + + Sbjct: 450 AVALADKLDTLAGIFGIGMLPKGDKDPFALRRASIGVLRIISERSYDLDVRELLSVAVEA 509 Query: 533 ------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 N F R + D+ I D+I+A+ + + F Sbjct: 510 YGDKLSNADTLDNATDFVLARFRAMYQDQGIDTDVIQAVNARNVSKPTDFAARVHAVAAF 569 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + KR+ ILA K N +++++ L E+ L+ I+ + Sbjct: 570 KALPQALALAAANKRVANILA---KNNVADAVDVNESLLNETQERDLFEQITQQQATVNH 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 +++ Y + L ++ ++ FFD ++V DD +R N Sbjct: 627 ALNTNDYTTVLSSLATLQPVVDAFFDNIMVMSDDSALRQN 666 >gi|163798103|ref|ZP_02192041.1| Glycyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159176640|gb|EDP61216.1| Glycyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 701 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 247/727 (33%), Positives = 370/727 (50%), Gaps = 82/727 (11%) Query: 29 LIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVGAGKKAIDGFLRS 88 + LK G+ + Y TP RL L + GL P++ EER GP+VG+ KA+ GF+++ Sbjct: 1 MTAKLKAGGLTFATAEAYVTPRRLALVVDGLPASQPDRTEERKGPKVGSPDKALQGFMKA 60 Query: 89 TGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS 148 G++TI +++ KGD Y AV P +E L + AI ++PWPKSMRW Sbjct: 61 AGIETIEQAEVRSSD-KGDFYFAVRHIPGAPLERYLPYPLFEAISEMPWPKSMRWGRND- 118 Query: 149 PISAFSWIRPLKSILCILVAEDAKEKI----------IDLDLKEIPCGNITYGHRFHAPH 198 F W+RPL IL ++ + I + GHRF AP Sbjct: 119 ----FRWVRPLHGILAMVDGKTLDLDFQLLRTQEEARNPTPAGTIKASGESRGHRFLAPE 174 Query: 199 PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVE 258 P V S Y L +A V+LD E R+ I + LA GL ED+ LLEE+ GLVE Sbjct: 175 PFAVASFADYRAKLRDAFVILDREERKRIIADGIAALAKEAGLVAKEDQGLLEEVCGLVE 234 Query: 259 WVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDG-GAA 317 W +G D +++ +P+E++ +++++QK F T +G LA+ F++V+N+ + A Sbjct: 235 WPVPMLGRIDAQFMGVPKEVLVTSMRSHQKYFALETADGALADRFVVVANMASEPTRDAT 294 Query: 318 IVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDV 377 IV GN +V+ ARL DA FW +D L PL R L V Sbjct: 295 IVAGNEKVLRARLSDAKFFWDQD--------------------LKTPLANRREALRT--V 332 Query: 378 VFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 F+ ++GT ++V R L +I + I AD LV RA LSKADL T +V EFPELQG + Sbjct: 333 KFYDRLGTMADKVQRFAQLAVEIGERIGADGDLVRRAATLSKADLTTGMVSEFPELQGIM 392 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G+ YA+ E+ S +AI EH P GP + PT +S+ V+LADK+DTL+ F+AI E P+ Sbjct: 393 GRYYALDAGEDPSVGEAIAEHYSPLGPSDRCPTAPVSVAVALADKIDTLVGFFAIGETPT 452 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------------------- 530 GSKDP+ALRRA LG+IR+I+EN + +PL Sbjct: 453 GSKDPFALRRAALGVIRLIIENNLRVPLVDLFASAFGRLPRDVVDASLESAAAKLGGGEV 512 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIK 575 Q L+ FF DRLK++L ++ +RHDLI A+ + D+L+ ++ + Sbjct: 513 PAGWYTEFTVLPFIRQELLGFFADRLKVHLREQGVRHDLIAAVFELGDEDDLVRLLARVH 572 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDF 634 L +F + G L +R IL EEKK+ S E L+L E LY ++ Sbjct: 573 ALADFLGTEDGANLLTGFRRASNILRAEEKKDGVSHSAEPEAHRLVLSEETALYEALAAA 632 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ ++ + + L ++ PI+ FF++V VN DD ++R NRL +L +++ + Sbjct: 633 EPVLESALKAEDFAGAMATLATLRSPIDAFFEKVTVNADDADLRVNRLRILAQVRDAMGR 692 Query: 695 VINVQKI 701 V + ++ Sbjct: 693 VADFARV 699 >gi|306820784|ref|ZP_07454409.1| glycyl-tRNA synthetase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551174|gb|EFM39140.1| glycyl-tRNA synthetase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 687 Score = 711 bits (1837), Expect = 0.0, Method: Composition-based stats. Identities = 222/725 (30%), Positives = 364/725 (50%), Gaps = 65/725 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D LLE+ +EEIPAR + + L LKE + + + TP R +++ LS Sbjct: 3 KDLLLELGTEEIPARFISSTKKSMKSFLEKRLKELRISFDTINIKSTPRRFSIFINKLSD 62 Query: 62 HSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 E +EE GP KA+ GFL+S + I D + K+ + VY+ + Sbjct: 63 KQTESVEEIKGPSRKIAFDENNNPSKALAGFLKSKNVS-IDDIKFVKNGNEEYVYVEK-K 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + LK I I + +PK MRW +IRP++ ILC+ + Sbjct: 121 LESLDTKSYLKEIFEQMIDNLSFPKPMRWGGNK-----IKFIRPIRWILCLY-----GNE 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + +L++ + N+T GHRF I+V S++ Y + LEE V+LD E RR I + + Sbjct: 171 VPELEMFNLKASNLTRGHRFLGKSYIEVPSIEEYEKILEENYVILDDEKRRELIRSQITK 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A + +ED+DLLEE+ +VE+ G F ++YL LP+E I +K +Q+ F Sbjct: 231 IAEDLNSIYMEDEDLLEEVNYIVEYPTALYGQFKEEYLKLPKETIITPMKEHQRYFPVLD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L N FI V N + +GN +V+ ARL DA F+++D Sbjct: 291 KSGNLVNKFITVRNGN-DYMIENVRKGNEKVLDARLSDAKFFYEQDT------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 SK L++ + RL+ +V+H K+GT +++ R++ + K A+L++AD + RA Sbjct: 337 -------SKKLEEYVERLNT--IVYHEKLGTMHDKMQRLQSISKSFAKLLNADESDAQRA 387 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EF ELQG +G YA + E DAI EH PR + V +K+ Sbjct: 388 AYLCKADLTTSMVFEFTELQGIMGYYYANISGEKEEISDAIVEHYLPRFSGDEVAKSKLG 447 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 I +SLADK DT+ F+A+ KP+GS+DPYALRR LGI+ ++ENK+ + + + I+ Sbjct: 448 IVLSLADKFDTMAGFFAVGIKPTGSQDPYALRRTALGILNTLIENKLLLSMEELIKVALN 507 Query: 533 ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F RLK L D+ IR+D+++A++ + ++ + L Sbjct: 508 EYKDKIEFNLEEVYLEILDFMKLRLKNILLDKKIRYDVVDAVI-DDISSVFRTFEKAVQL 566 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 ++ S++ L + R++ I K + +I Q EK++Y+ Sbjct: 567 EKWLSNSDNIPNLNTFIRVYNI-----SKEIATNEKIDTQLFEQNEEKQVYSKYLKILPV 621 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ +Y + + L S+ + I FFD V++ V+D ++R+NRL L+ +K++I + + Sbjct: 622 VENLNSELKYIESLNELSSMTKDINDFFDNVMIMVEDDKIRNNRLLLVNALKSMIFEIAD 681 Query: 698 VQKIV 702 KIV Sbjct: 682 FSKIV 686 >gi|75907017|ref|YP_321313.1| glycyl-tRNA synthetase subunit beta [Anabaena variabilis ATCC 29413] gi|75700742|gb|ABA20418.1| glycyl-tRNA synthetase beta chain [Anabaena variabilis ATCC 29413] Length = 716 Score = 711 bits (1837), Expect = 0.0, Method: Composition-based stats. Identities = 199/744 (26%), Positives = 323/744 (43%), Gaps = 73/744 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L + +++ Y TP RL + + GL Sbjct: 1 MPGFLLEVGTEELPASFLSGAIAQWRSRIPQSLAANSLTSESVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G A GF + G++ + D KG+ + Sbjct: 61 SQQPDREEEIKGPPAQAAFKDGQPTPAAVGFAKKQGVELEALEVRPTD--KGEFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L +VP I + + MRW + RP++ ++ +L + Sbjct: 119 TPGRPVAEILTELVPQWIYHLEGKRLMRWGDGD-----VRFSRPIRWLVTLLDEAILPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ L + I+YGHR P PI +Q Y+ L V +D + R I Sbjct: 174 LVNGSLT-VKSDRISYGHRVLHPAPITIQQASDYVNTLRSGYVTVDAKERAAIIKEQVET 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +G DLLEE+ LVEW +G F++++L LP E+ + ++Q+ F Sbjct: 233 TVQKLGGYTEIYPDLLEEVTNLVEWPSPVVGKFEEEFLNLPTEVTTTVMVSHQRYFPVFK 292 Query: 295 --REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI VSN + I GN RV+ ARL D F+K D Sbjct: 293 TGDHKELLPYFITVSNGDPT-KSDVIAVGNERVIRARLADGQFFYKTD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 LSK L+ + +L+ V F +G+ +V RI + KI+ ++ +D Sbjct: 340 --------LSKSLESYLPQLET--VTFQEDLGSLRGKVERIVKVAAKISSQLELGESDRQ 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA +L KADL T++V EFPELQG +G++YAV E+ AI EH PRG + +P Sbjct: 390 HIQRATLLCKADLVTQMVFEFPELQGIMGQKYAVASGESPEVATAIFEHYLPRGADDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 LAD+LDTL++ + + P+GS DP+ALRRA +I I + I L+ + Sbjct: 450 QTLTGQVAGLADRLDTLVSIFGLGLIPTGSSDPFALRRAANAVINITWAANLQINLASLL 509 Query: 530 ED-----------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILRPEN------- 564 L FF R++ L + I +DL+ A+L + Sbjct: 510 AQTVTEFATQYNKDQAPLITALNEFFLQRIRTLLQEEKQIDYDLVNAVLGDNDPEYTERA 569 Query: 565 -DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNREISLEISPQYLLL 621 +LL + D +L + +K + R ++ A + + + + + P+ Sbjct: 570 LQDLLDVRDRALYLQQIRRDGTLDKIYETVNRSTRLAAQGDLDTQQLDPTSVLRPELFQK 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVR 678 +E Y + Q + + Y + L I + FF D VLV D E++ Sbjct: 630 SSESAFYDALLKLVPQTQAAQQSRNYQLLVAGLVEIAPTVSNFFDGADSVLVIDPDPEIK 689 Query: 679 DNRLSLLQYIKNIILIVINVQKIV 702 NRL++L ++N ++ + IV Sbjct: 690 RNRLNILGLLRNHARVLADFGAIV 713 >gi|116514231|ref|YP_813137.1| glycyl-tRNA synthetase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275037|sp|Q04A23|SYGB_LACDB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116093546|gb|ABJ58699.1| glycyl-tRNA synthetase beta chain [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 688 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 211/731 (28%), Positives = 351/731 (48%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF R G+ D ++ Y+ V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSA-DDIYFEELKGVEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K E +L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 122 AGKEAKEILLG--LDEVIKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R+ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKAMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVNSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINCFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 P+ + R+D V FH KIG+ E+++R+R++G +A+ +VA Sbjct: 337 ---------PISHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYACLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL + + + P +E+ LY + Sbjct: 566 AAAKVLQQHHDDEAFKPVVESLTRIANILKKAKFSQ---ASPVDPSLFEDRSEQDLYDGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + K + ++ + ++ I+ +FD ++ D V++NRLS L + ++ Sbjct: 623 EALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|307543598|ref|YP_003896077.1| glycyl-tRNA synthetase subunit beta [Halomonas elongata DSM 2581] gi|307215622|emb|CBV40892.1| glycyl-tRNA synthetase subunit beta [Halomonas elongata DSM 2581] Length = 690 Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 218/720 (30%), Positives = 354/720 (49%), Gaps = 59/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FLLE+ EE+P ++ L+ + L + V + ++ Y +P RL + + L+ Sbjct: 7 TFLLELGVEELPPSAIDTLSDALADGIRQGLDDANVEHGDIDAYASPRRLAVRVAALADK 66 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ ER GP + G KA +GF RS G+ S ++ D KG ++P Sbjct: 67 QPDREVERRGPSLAAAFKDGEPTKAAEGFARSCGVSVDSLIHLETD--KGTWLGYREQQP 124 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +L IV AI +P PK+MRW S + RP ++ + E+++ Sbjct: 125 GEATTTLLPAIVEKAIAALPVPKNMRWGA-----SRVEFSRPAHWLVMLY-----GERVV 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + G T GHRFHAP PI++ D Y+ +E A VL D E RR I A Sbjct: 175 EASALGLQAGRTTRGHRFHAPEPIELGHADDYLGAMENAWVLADREQRRERIREQVLAEA 234 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 V D++LL E+ GLVEW GSFD+++L +P E + ++K NQK F + Sbjct: 235 EVQEATAVIDEELLIEVSGLVEWPVALTGSFDERFLEVPAECLVSSMKANQKYFHLLDDD 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI +SNI + ++QGN +V+ RL DA F+ D+ Sbjct: 295 GKLKPRFITISNIDSQ-APELVIQGNEKVIRPRLADAAFFYDTDRQ-------------- 339 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 +PL +R+ L VVF ++GT ++ R + IA ID DV RA Sbjct: 340 ------RPLVERVQELS--SVVFQQQLGTLADKAHRSAAVAAFIAGRIDGDVGHARRASE 391 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+K DL TE+V+EFPELQG +G+ YA E+ A+EE PR + VP+ + + Sbjct: 392 LAKCDLVTEMVQEFPELQGTMGRYYATHDGEDAEVARALEEQYLPRFAGDEVPSTRTGLA 451 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---- 532 ++LAD+LDTL + I ++PSG+KDP+ALRRA++G++ I+++ ++D+ L + +E Sbjct: 452 LALADRLDTLTGIFGIGQRPSGTKDPFALRRASIGVLNILIKGELDLDLRELLELAAAQH 511 Query: 533 -----------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 ++ + DR + + D I ++ A+ L ++ ++ F Sbjct: 512 QELPYAEGLVDEVLAYMLDRFRAWGRDEGIEAEVYLAVRARPVTKPLDFARRLQAVHAFA 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S + + KR+ ILA K++ EI+ E+ L +AE+ L ++ + Sbjct: 572 SREEAAALAAANKRVSNILA---KQDDEIAPEVDTSLLAEDAERDLAEALAQCREKVAPL 628 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 RY D+L + P++ FFDQV+V +D V+ NRL+LL ++ + L V ++ ++ Sbjct: 629 FAEARYSDALDVLAGLRNPVDRFFDQVMVMAEDAAVKRNRLALLASLQALFLEVADIAEL 688 >gi|329119287|ref|ZP_08247974.1| glycyl-tRNA synthetase beta subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327464634|gb|EGF10932.1| glycyl-tRNA synthetase beta subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 686 Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 209/707 (29%), Positives = 353/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I + + Y +P RL + ++ + ++ + Sbjct: 15 PPKALNNLGNAFAAAVAEGLEKAQLIQGDAQYTAYASPRRLAVQVQNVKAVQDDQHVVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF RS G S +I D K DVY + + + ++L+ Sbjct: 75 GPAVANAMKDGAPTKALEGFARSCGADIGS-LKIIHD-GKQDVYAHEFTQAGKPLAELLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S +++RP+ ++ + A ++ ++ + Sbjct: 133 DIINQAVKKLPIPKVMRWGS-----STHTFVRPVHGLVILHGAN-----VVPANVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI ++ A + + Sbjct: 183 GNTTLGHRFLSDGLITIENADSYAEQMREQGKVIASFATRKAAIQTALNQHAGRLNATVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F+ +L +P+E + LT++ NQK F G L N F+ Sbjct: 243 ADEALLDEVSALVEWPVVLEAGFEAHFLEVPQECLILTMQQNQKYFPLLDANGRLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN++A+D + I+ GN RV+ ARL DA F+K+DQ N Sbjct: 303 LVSNLEAADP-SHIIHGNERVLRARLSDAEFFYKQDQKN--------------------T 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + A + AD A +RA L+KADL T Sbjct: 342 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHTAAALGADRAQAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L EN + DA+E+H +PR + +P + ++ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGENAAIADALEQHYRPRFAGDALPESPVATAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R+++++ +D+ L Sbjct: 460 TLVGIWGIGLVPTGDKDPYALRRAALGILRMLMQHGLDVNDLIQTAFASFPQGLLNDKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F RL + L + D D++ A+L L + + + F + + Sbjct: 520 AEVADFMQARLAVLLQN-DYPQDIVAAVLAKRLGRLNDLAAKLDAVASFKALPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + E LYA I+ ++ + + Sbjct: 579 ANKRVQNLLKKADAELG----AVNEALLQQDEEHALYAAAQAMQPKIEAALARQDFQAAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L ++ ++ FFD V+V DD V+ NRL+LL + + V ++ Sbjct: 635 SELAAVKPQVDAFFDGVMVMADDTAVKQNRLNLLNQLSQQMNAVADI 681 >gi|325125921|gb|ADY85251.1| Glycyl-tRNA synthetase beta chain [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 688 Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 211/731 (28%), Positives = 352/731 (48%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF R G+ D ++ Y+ V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSA-DDIYFEELKGVEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K E +L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 122 AGKEAKEILLG--LDEVIKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKDMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVNSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINCFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 P+ + R+D V FH KIG+ E+++R+R++G +A+ +VA Sbjct: 337 ---------PISHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYACLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL + + + P +E+ LY + Sbjct: 566 AAAKVLQQHHDDEAFKPVVESLTRIANILKKAKFSQ---ASPVDPSLFEDRSEQDLYDGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + K + ++ + ++ I+ +FD ++ D V++NRLS L + ++ Sbjct: 623 EALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|85374000|ref|YP_458062.1| glycyl-tRNA synthetase beta subunit [Erythrobacter litoralis HTCC2594] gi|84787083|gb|ABC63265.1| glycyl-tRNA synthetase beta subunit [Erythrobacter litoralis HTCC2594] Length = 742 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 260/773 (33%), Positives = 387/773 (50%), Gaps = 105/773 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDFLLE+ SEEIPARMQ A ++L + + GV + + TP RL L + L Sbjct: 1 MPDFLLELRSEEIPARMQAGARDELEKLFRREMDAAGVEAGELTVWSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP GA +AIDGF R G+ T +I+ D K + Y AV+ KP R + Sbjct: 61 EATQAVREEAKGPPEGAPDQAIDGFCRKNGV-TRDQLEIR-DVKGRNTYFAVIEKPGRAV 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D+L +P I+ WPKSMRW T + W+RPL I+ +L + +++ ++ Sbjct: 119 KDLLAEAIPAIIRDFSWPKSMRWGTASMSTESLRWVRPLSGIVALL-----GDDVVECEV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G +T GHRFH I + + D Y L V++D E R++ I A ++A+ G Sbjct: 174 HGVTSGAVTLGHRFHHSGDITIGNADDYAMKLRAGHVIVDHEQRQDLIREGAAKVAAEAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT-------- 292 L+LVED+ L+ E GL EW +G F++ +L +P E I+LT + NQK FV Sbjct: 234 LKLVEDEGLVIENAGLTEWPVPLLGRFEEDFLQVPPETIQLTARVNQKYFVCHRSPAEAG 293 Query: 293 RTREGV-------------LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 + +G LAN FI +NI+A DGGA +V GN +V+AARL DA FW Sbjct: 294 VSDDGGQPHEVPASAGTQQLANAFICTANIEAEDGGARVVDGNRKVLAARLADARFFWDV 353 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K L + L+ + FH K+GT ++V R+ L + Sbjct: 354 DRK--------------------KTLAEHAKGLER--ITFHEKLGTVADKVERVANLARW 391 Query: 400 I---------------------------AQLIDADVALV-DRAIVLSKADLCTEIVREFP 431 + A + ++A + ++A L+KADL TE+V EFP Sbjct: 392 LVESDIVVPAKAGTSLGQSAKTNEIPASAGMTKEELADLTEQAARLAKADLVTEMVGEFP 451 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 ELQG +G YA + DAI +H KP G + VPT +++ VSLADKLDTL +F++ Sbjct: 452 ELQGLMGGYYARAEGLPDEVADAIRDHYKPVGQGDEVPTAPVTVAVSLADKLDTLRSFFS 511 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDI 551 I+EKP+GSKDP+ALRRA LG+IR++ EN + + Q L+ FF DRLK+ + + Sbjct: 512 IDEKPTGSKDPFALRRAALGVIRLMTENGLRMSAGQ----GELLEFFADRLKVQQREAGV 567 Query: 552 RHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN--- 607 RHDLI+A+ D+L+ ++ + L F + G L KR IL E+ Sbjct: 568 RHDLIDAVFALGGEDDLVRLLARVHALQAFVQTEDGTNLLAGYKRAANILKKEQWDAEPE 627 Query: 608 ----------------REISLEISPQYLL---LEAEKRLYAVISDFGTHIQESMDHKRYH 648 REI E + L AEK L + +++ + + Sbjct: 628 HTGDEDPLENVDDPDMREIYAEAVEKKLSYTPEPAEKALIDALDSAEPKAVATVETEDFA 687 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ PI+ FF++V+VN +++ VR RL LL ++ + V + +I Sbjct: 688 AAMSALASLRAPIDAFFEEVIVNAEEKHVRAARLDLLARFRDAVHRVADFSRI 740 >gi|256617037|ref|ZP_05473883.1| glycyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256596564|gb|EEU15740.1| glycyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] Length = 694 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 350/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 336 ----------STIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D M + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRMIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|15613934|ref|NP_242237.1| glycyl-tRNA synthetase subunit beta [Bacillus halodurans C-125] gi|11387198|sp|Q9KD48|SYGB_BACHD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|10173987|dbj|BAB05090.1| glycyl-tRNA synthetase beta chain [Bacillus halodurans C-125] Length = 693 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 342/733 (46%), Gaps = 73/733 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFLLEI EE+PAR + L+ + LKE+ + ++ + + TP RL + + G Sbjct: 1 MSKRDFLLEIGLEELPARFVSDGEKQLADKVESFLKEQRISFEQISSFSTPRRLAVLVIG 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ + EE GP G KA GF R G+ + D I++ K + A Sbjct: 61 LAEKQADVEEESRGPAKKIALDESGNWTKAAQGFARGQGVS-VDDLYIQE-VKGTEYIFA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L + I + +PK+MRW T + + RP++ ++ + E Sbjct: 119 KKFVAGQETASLLPE-LKELITSLHFPKNMRWHTY-----SLRYARPIQWLVALYGQE-- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ + G T GHRF + + Y L + V+ D E R+ AI + Sbjct: 171 ---VIPFEITGVAAGLETAGHRFLG-ENVTIDEPTLYKEKLLQQYVMADSEERKKAIRHQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + D+DLL+E+ LVE+ G FD+ +L LP E++ +++ +Q+ F Sbjct: 227 IQSIMEEKDWVIPIDEDLLDEVTNLVEYPTALFGRFDEAFLSLPNEVLITSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + + G L F+ + N IV+GN +V+ ARL DA F+ DQ Sbjct: 287 VKNQAGELLPYFVTIRNGDHR-HLENIVKGNEKVLRARLSDAAFFYGEDQKLN------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 +D+ RLD +V+H ++G+ G+++ R++VL IA+ + + Sbjct: 339 -------------IDEANKRLD--QIVYHEELGSIGDKIKRVKVLAASIAEKLGVTSQTL 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++R + K DL T++V EFPELQG++G+ YA + E I EH PR + Sbjct: 384 QAINRVAEICKFDLVTQMVGEFPELQGRMGEVYAEIAGEPPEVAKGIVEHYLPRFAGDQS 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID------ 522 P++ VSLADKLDT+ + I P+GS+DPYALRR G+++I+L++++D Sbjct: 444 PSSVQGTVVSLADKLDTIAACFGIGLIPTGSQDPYALRRQAAGVVQILLDHELDLDVDEL 503 Query: 523 -------------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + + + L FF R+K L D +R+DL +A+L N+ Sbjct: 504 LLETVEQLQEKELLTVPESEVVKQLREFFALRVKTKLQDEGVRYDLTDAVLASGISNVPV 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + K L ++ + ++ + R+ I EK ++ I+P E E+ LY Sbjct: 564 VFKKAKLLVSKVNTPEFKELVEGLSRVTNIAGKAEK-----NVAINPDLFEKEEERVLYE 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q ++ L EPI +F+ V+V VD++ +++NRL+L+ Sbjct: 619 AYVQTKDLVQGALASGDVSAAYAALEQTIEPIHQYFEHVMVMVDEQVIKENRLALMHAFA 678 Query: 690 NIILIVINVQKIV 702 +I N Q+IV Sbjct: 679 GVIGSYANFQEIV 691 >gi|259503185|ref|ZP_05746087.1| glycyl-tRNA synthetase [Lactobacillus antri DSM 16041] gi|259168842|gb|EEW53337.1| glycyl-tRNA synthetase [Lactobacillus antri DSM 16041] Length = 691 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 212/734 (28%), Positives = 361/734 (49%), Gaps = 77/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE + + ++++Y TP RL L + GL Sbjct: 1 MANSYLLEVGVEEMPAHVVTPSIKQLHQRVADYLKEARISFSDIQEYATPRRLALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ E GP G KA GF R G I+ KG+ Y+ V Sbjct: 61 ADKQPDVDETVKGPAKKIAQDSDGNWTKAAIGFTRGQGATVDD---IEFKEVKGEEYVFV 117 Query: 113 LRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +VL +P I + +P M+W + +IRP++ ++ +L Sbjct: 118 EKHIAGKPVAEVLAG-LPEVITALNFPTLMKWGYNN-----LQFIRPIRWLVSLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + ++ G T GHRF +++ + D Y+ DLE+ V++DP+ R+ I + Sbjct: 167 NDQVVPFSILDVEAGRTTRGHRFLGHD-VELANADDYVTDLEKEFVIVDPQRRKKVISDQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + +D DLLEE+ LVEW F GSFD KYL LP+E++ ++K NQ+ F Sbjct: 226 IDAIVEEHDWVIDKDPDLLEEVNNLVEWPTAFAGSFDPKYLVLPDEVLITSMKDNQRFFY 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G L FI V N + +++GN RV+ RLEDA F++ DQ Sbjct: 286 LRDHDGNLLPNFIAVRNGN-KEYLENVIKGNERVLVPRLEDAKFFYEEDQKL-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 +DQ + RL V FH KI + +++ R+ V+ + I Q ++ A++ Sbjct: 337 ------------TIDQYVERLK--KVSFHDKISSMYDKMQRVAVIARLIGQRLNLSAAEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P + Sbjct: 383 ADLDRAAHIYKFDLTTQMVGEFAELQGVMGEIYAKLFGEKDDVAAAIREHYMPISAEGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P K+ +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + + L Sbjct: 443 PVTKLGAILAIADKLDSILSFFAVDMIPSGSNDPYALRRQAFGIVRIINDRGWHLSLLGI 502 Query: 529 IEDQNLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L FF DRLK + R +RHD+I+A+ +ND++ Sbjct: 503 QPVLIKALADADVAIDFDLSKNASAVRNFFLDRLKQFFSGRRLRHDIIDAVTDTDNDDIE 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 T+ + ++E A + + + R+ +I +K ++E++ ++ PQ +E +LY Sbjct: 563 TVFEAATAIDEHKDDADFKDAVEALTRVLRI---SKKGHQELAAQVDPQLFENPSEAKLY 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + + + + L + I +FD+ ++ + VR+NRL+ L I Sbjct: 620 AAVDKVAAGAVDRTVAENFT----ALRQLAPVITEYFDENMIMDKNEAVRNNRLAQLAII 675 Query: 689 KNIILIVINVQKIV 702 + ++ N+ ++ Sbjct: 676 ARLARVMGNLNDLI 689 >gi|237748760|ref|ZP_04579240.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes OXCC13] gi|229380122|gb|EEO30213.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes OXCC13] Length = 694 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 202/726 (27%), Positives = 352/726 (48%), Gaps = 62/726 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLS 60 L+EI +EE+P + K A+ + + LK+E + + Y TP RL + + + Sbjct: 4 TLLVEILTEELPPKALMKLADSFASTIESSLKQEDFLNDTSKTTIYATPRRLAVTITDVR 63 Query: 61 PHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAV 112 SP+K +++ P G + L + + I +++K P K + + Sbjct: 64 DVSPDKTVRQKVLPVNVALDADGNPTAPLKKKLAALNIPDIDISKLEKAPDGKNESFFYT 123 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + L+ V A +P PK M + ++RP+ + + Sbjct: 124 YTAAGLPLASALQKAVEKAAHDLPVPKMMTYQRPDGE--TVEFVRPVHEFIAM-----HG 176 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILND 231 E ++ + L + G IT+GHRF + I + + D+Y LE V+ + R+ I Sbjct: 177 ENVLPITLLGLSAGRITHGHRFLSDGDIGILAADYYAVTLETRGKVIPGFQSRKERIRAM 236 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A G +++ + LL+E+ LVEW V+ +F+ +L +P+E + LT++TNQK F Sbjct: 237 LNEKAK--GDKVLMPESLLDEVTALVEWPIVYECNFEDTFLEVPQECLILTMQTNQKYFA 294 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L + F++VSN++ + I+ GN RVV RL DA F+++D+ Sbjct: 295 LTDASGRLRSRFLIVSNMET-NTPQRIISGNERVVRPRLSDARFFFEQDKK--------- 344 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 K L+ R+ L +VV+H K+GT +R++R+R+L IA+ + D L Sbjct: 345 -----------KKLEDRLPGL--ANVVYHNKLGTLAQRMARVRLLSVFIAEKLGYDKQLA 391 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L+KADL TE+V EFPELQG +G YA E A +EH PR + +PT Sbjct: 392 DRGAQLAKADLLTEMVGEFPELQGIMGTYYARHDGEPEEVALAAQEHYMPRFAGDVLPTT 451 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 ++LADK++TL+ W I +P+G +DP+ALRR LG +RI++E K+ + L + + + Sbjct: 452 ATGTVIALADKMETLVGIWGIGLQPTGDRDPFALRRHALGFLRILIEKKLPLSLREVLAE 511 Query: 532 ---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + +I FF DRL+ L DR D IEA+L D +++ + Sbjct: 512 TVSILSTNATMKDPTEGVIAFFMDRLRGLLRDRGYTPDEIEAVLSQNPDRFDNLIERLDA 571 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + F + + KRI IL KK+ + ++ P L+ ++EK+L+ ++ Sbjct: 572 VRAFAEMPEAASLAAANKRITNIL----KKSDVNTGQVQPDVLVEDSEKKLFTDMTAVKP 627 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + Y + + + ++ FF V+V DD+++R+NR++LL+ + ++ V Sbjct: 628 QADQKFAAGDYTGTLKTMAQLHDDVDAFFTNVMVMADDQKLRNNRIALLKQLHTMMNQVA 687 Query: 697 NVQKIV 702 ++ K+ Sbjct: 688 DISKLA 693 >gi|163802139|ref|ZP_02196034.1| glycyl-tRNA synthetase subunit beta [Vibrio sp. AND4] gi|159173944|gb|EDP58754.1| glycyl-tRNA synthetase subunit beta [Vibrio sp. AND4] Length = 698 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 327/713 (45%), Gaps = 73/713 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ + P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELAHEGVKWFAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 ADSQSDKIVEKRGPAVSAAFDAEGNPTKAAQGWARGCGITVDQADRMVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGKPTSEIVVELAAKALANLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASARTIRGHRFMGEQEFTIDSAEQYPTLLEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+AVG + DL+EE+ LVEW V F+++YL +P E + T+K +QK F Sbjct: 229 AQKAAAAVGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEYLKVPSEALVYTMKGDQKYFP 288 Query: 292 TR-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYSHENGDKNRKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK---- 343 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 +PL R+ L+ +F ++GT ++ RI L IA+ I A Sbjct: 344 ----------------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIGA 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 DV RA +L+K DL T +V EF + QG +G YA E A+ E PR + Sbjct: 386 DVEKSKRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGD 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+N +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E + L Sbjct: 446 KLPSNGVSTAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYHLDLV 504 Query: 527 QFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 + +Q +I F R + + D D+I+A+L Sbjct: 505 DLVAKAKSLFAQEDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSIDIIQAVLARRPTK 564 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 +K ++ F E + KR+ ILA K + E++ +I L AEK Sbjct: 565 PADFDQRVKAVSHFRELEAAESLAAANKRVGNILA---KFDGELAADIDLALLQENAEKA 621 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 L + ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 LAESVEVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 674 >gi|42519243|ref|NP_965173.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] gi|81832210|sp|Q74IZ2|SYGB_LACJO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|41583531|gb|AAS09139.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] Length = 690 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 346/731 (47%), Gaps = 75/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF+R G+ T D ++ Y+ V + Sbjct: 63 KQEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTT-DDIYFEELKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ D+L + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 122 EGKK-ASDILMGM-SDIVKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIANADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N + + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFISVRNGNS-EYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + ++ Sbjct: 337 ---------PLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDTEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L EN + AI+E P ++P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGENENVSVAIKESYMPTSAEGDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N +I +E+ LYA + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRNAN---DIDESLFQDVSEEELYAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + S+ + + I +F+ ++ D +V++NRL+ L + N+ Sbjct: 623 NALEENTDLSIA-----DLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNNL 677 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 678 ADRMGDLSKLV 688 >gi|126735419|ref|ZP_01751165.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. CCS2] gi|126715974|gb|EBA12839.1| glycyl-tRNA synthetase beta subunit [Roseobacter sp. CCS2] Length = 758 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 267/783 (34%), Positives = 398/783 (50%), Gaps = 109/783 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA+DL ++ L E G+ Y + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQTRAADDLRKLVTDGLVEAGLTYAGAAAFSTPRRLALSVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S EER GP+VGA KAI+GFLR G+ D +++ D K G VY AV+ KP R+ Sbjct: 61 AESKAVREERKGPKVGAPDKAIEGFLRGAGVA-REDLEVR-DDKNGQVYFAVIEKPGRMA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ ++ PWPKSMRW + W+RPL +ILCIL +++A +++ L++ Sbjct: 119 ADIIAEVLEKTVRNFPWPKSMRWGNGN-----LKWVRPLHAILCIL-SDEAGTEVVPLEV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP V + D Y L+ A V+L + R AI +A A A+G Sbjct: 173 DGIKSGNTTQGHRFLAPDAFTVANFDDYEAKLKRANVVLRADERAEAIWAEATTQAFALG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L++VED+ LL E+ GLVEW V +G D +L LP E+++ ++K +QK F R + Sbjct: 233 LDVVEDRGLLAEVAGLVEWPVVLLGQIDDAFLGLPPEVLQTSMKEHQKFFSVRNPKTERI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N++ +D G I+ GN +V++ARL DA FW+ D + ++ ++ LD Sbjct: 293 ERFVTVANMETADNGTTILAGNQKVLSARLADAKFFWENDLR-------VAKAGMQPWLD 345 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+G+Q +R+ RI L ++IA + AD L +A ++KA Sbjct: 346 ------------SLANVTFHNKLGSQKDRIERIAALAREIAPSVGADPDLAAQAAKVAKA 393 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA + A EEH P GP ++VPT +S+ V+LA Sbjct: 394 DLSSEMVYEFPELQGLMGRYYAAEAGLDAQVAAACEEHYSPLGPSDDVPTAPVSVAVALA 453 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF-- 538 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + Sbjct: 454 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENGHRCVIGDLVVTAYQEHALAW 513 Query: 539 --HDRLKLYL-----------------HDRDIRHDLIEAILRPENDNLLT---------- 569 RL+ YL DR + D + A L E + Sbjct: 514 AKQYRLRRYLDPQNEKGVTDFFEGVDGEDRFLGKDAVNAALAHEKVLITDPTTQHSSSPV 573 Query: 570 -----------------IVDLIKH-----------LNEFFSSAKGEKF------------ 589 D +K ++ + + Sbjct: 574 YDLAHPTLNLSRDLLSFFHDRLKVFLKDKGIRHDIIDACIAMPGNDDLTLLVKRAEALAA 633 Query: 590 ----------LLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHI 638 + KR IL E+K+ E S ++ EAEK L+A + I Sbjct: 634 TLATDDGENLIQGFKRANNILTQAEEKDGVEYSYGADIKFAEDEAEKALFAALDAADAKI 693 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +M + + + ++ PI+ FF V VN + +R NRL+LL I+NI L V ++ Sbjct: 694 APAMKAEDFSTAMTAMAALRAPIDAFFTDVQVNAESEILRRNRLNLLSRIRNICLSVADL 753 Query: 699 QKI 701 KI Sbjct: 754 TKI 756 >gi|323496933|ref|ZP_08101961.1| glycyl-tRNA synthetase subunit beta [Vibrio sinaloensis DSM 21326] gi|323318007|gb|EGA70990.1| glycyl-tRNA synthetase subunit beta [Vibrio sinaloensis DSM 21326] Length = 688 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 202/703 (28%), Positives = 329/703 (46%), Gaps = 63/703 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGASLAHEGVKWYAAPRRLALKVAAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K+ E+ GP V G KA G+ RS G+ ++ D KG+ L Sbjct: 61 AEGQEDKVVEKRGPAVSVAFDADGNATKAAQGWARSNGITVEQADRLVTD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++ + A+ +P K MRW + +IRP+K++ ++ A+ Sbjct: 119 QEVKGQATSEIVVDLAAKALGNLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGAD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I+ ++ + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIEGEILGVASDRTIRGHRFMGEQEFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + A+AVG + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 SQKAAAAVGGVADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPSEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYDENKKLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 +PL R+ L+ +F ++GT ++ RI L IA+ IDADV Sbjct: 339 -----------RPLIDRLPELEQA--IFQKQLGTIKDKTDRITELAGYIAEQIDADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E+ A+ E PR + +P+ Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYATHDGEDEQVALALYEQYMPRFAGDELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+EN + L+ I Sbjct: 446 GISSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVENGYSLDLTDLIAK 504 Query: 532 Q---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++I F R + D D+I+A+L +K Sbjct: 505 AQSLFGDKLTNANVANDVIDFMLGRFNAWYKDEGYSVDIIQAVLANRPTKPADFDQRVKA 564 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 VSHFRELEAAEALAAANKRVGNILA---KFDGELAADIDLALLQEDAEKALAESVEVMTE 621 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 ++ + Y + L + EP++ FFD V+V DD ++ Sbjct: 622 ALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKK 664 >gi|329667247|gb|AEB93195.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii DPC 6026] Length = 690 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 199/731 (27%), Positives = 345/731 (47%), Gaps = 75/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF+R G+ T D ++ Y+ V + Sbjct: 63 KQEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTT-DDIYFEELKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ D+L + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 122 EGKK-ASDILMGM-SDIVKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIANADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N + + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFISVRNGNS-EYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + ++ Sbjct: 337 ---------PLTHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDTEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P +P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGEDENVSVAIKESYMPTSAEGELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N +I +E+ LYA + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRNAN---DIDESLFQDVSEEELYAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + S+ + + I +F+ ++ D +V++NRL+ L + N+ Sbjct: 623 NALEANTDLSIA-----DLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNNL 677 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 678 ADRMGDLSKLV 688 >gi|224824601|ref|ZP_03697708.1| glycyl-tRNA synthetase, beta subunit [Lutiella nitroferrum 2002] gi|224603094|gb|EEG09270.1| glycyl-tRNA synthetase, beta subunit [Lutiella nitroferrum 2002] Length = 686 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 213/711 (29%), Positives = 348/711 (48%), Gaps = 62/711 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + K A + + LK+ + + + +P RL L L + P++ + Sbjct: 15 PPKALPKLAASFAQTITDELKKLQFVAADASAHVFASPRRLALTLPAVLAVQPDQTIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G A+ GF RS G++ + K DVY K + + VL Sbjct: 75 GPAVAAGMKDGQPTPALAGFARSCGVEVSELSTM--SDGKQDVYAYRSVKAGQPLAAVLS 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV +A++K+P PK MRW S ++RP+ ++ + +E +I ++ + Sbjct: 133 DIVALALKKLPAPKLMRWGD-----SEHQFVRPVHGLVLLHGSE-----LIAGEVLGLKS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 T GHRF + + + D Y R L E+ V+ E RR I + ++ +G + Sbjct: 183 RRATLGHRFLSAGEVTLPDADSYARVLYEQGKVVASFEARRELIRHRLAEASAKLGAVIA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 ++ L++E+ LVEW V F+ ++L +P+E + LT++ NQK F G L N F+ Sbjct: 243 AEQALVDEVTALVEWPVVLEAGFEAEFLKVPQECLILTMQQNQKYFPLLDAHGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN++A+D + I+ GN RV+ ARL DA F+++DQ Sbjct: 303 LVSNLEATDP-SHIIHGNERVLRARLSDAKFFFEQDQKV--------------------R 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ RL DVV+H KIG+Q ERV R++ L IA + A+V RA L+KADL + Sbjct: 342 LESRLPRL--ADVVYHNKIGSQLERVERLQNLAGTIAGKLGANVDDARRAAYLAKADLVS 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E+ + AIE H PR +++P ++++V+LADKL+ Sbjct: 400 DMVGEFPELQGIMGMYYARHDGEHEAVAAAIEGHYHPRFAGDSLPHGPVALSVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-----------PLSQFIED-- 531 T++ W I P+G KDP+ALRRA LG++R++L+ +D+ P ++ Sbjct: 460 TIVGIWGIGLVPTGDKDPFALRRAALGVLRMVLDTPLDLKQLIVDTHDSFPANKLSASVA 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F +RLK +L D + D I+A+L E L + ++ + +F + Sbjct: 520 DEVFAFCLERLKNFL-AADYKVDEIDAVLALEPTRLDEVRAVLAAVAQFKQLPEAATLAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ IL E + ++P L +AEK LY + + + Sbjct: 579 ANKRVKNILKKAEGEVGV----VNPALLAEDAEKALYGAVQQLAPQVDAQFAAHDFAGAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L S+ P++ FFD V+V DD VR NR++LL + + V ++ + Sbjct: 635 AQLASLKAPVDAFFDGVMVMADDSAVRINRIALLARLAELFNRVADISLLA 685 >gi|313123891|ref|YP_004034150.1| glycyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280454|gb|ADQ61173.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 688 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 211/731 (28%), Positives = 352/731 (48%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L+ LKE G+ ++ ++ Y TP RL + +K L Sbjct: 3 KDFLFEIGVEEMPAHVVSKSVKQLADRTGKFLKENGLGFKEIKTYSTPRRLTILVKELDE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF R G+ D ++ Y+ V + Sbjct: 63 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSA-DDIYFEELKGVEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K E +L + ++ + +P MRW + F ++RP+ ++ + +E Sbjct: 122 AGKEAKEILLG--LDEVVKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 170 VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKDMIVSQIND 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LINSHNWQIKLDASLLEEVNNLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 289 QEGKLINCFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + R+D V FH KIG+ E+++R+R++G +A+ +VA Sbjct: 337 ---------PLSHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGDYLAKRFGLSAEEVADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 386 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYARLAGENENVSVAIKEHYMPTTAEGDLPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 446 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 506 IVELLSGKTPAKLPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL + + + P +E+ LY + Sbjct: 566 AAAKVLQQHHDDKAFKPVVESLTRIANILKKAKFSQ---ASPVDPSLFEDRSEQDLYNGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + K + ++ + ++ I+ +FD ++ D V++NRLS L + ++ Sbjct: 623 EALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLVAVNDL 675 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 676 AKRLGDLSKLV 686 >gi|258545073|ref|ZP_05705307.1| glycyl-tRNA synthetase, beta subunit [Cardiobacterium hominis ATCC 15826] gi|258519693|gb|EEV88552.1| glycyl-tRNA synthetase, beta subunit [Cardiobacterium hominis ATCC 15826] Length = 689 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 207/719 (28%), Positives = 344/719 (47%), Gaps = 61/719 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 L+EI EE+P + A+ + L G+ + ++ TP RL ++ L+ Sbjct: 6 TLLIEIGVEELPTKAVTTLADAGRDLWAQALANAGLTHGDIEALATPRRLAWRIRDLATR 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ ER GP + G KA GF S G+ + +D KG + + Sbjct: 66 QSDQKIERKGPALAAAKDKDGNWSKAALGFAASCGVDVAALA--VEDTPKGKWLMYYGEQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +E +L + +P K MRW S++RP+ S++ + A +++ Sbjct: 124 PGQPLEALLPELFRHVCDNLPIAKRMRWGDHEQ-----SFVRPVLSLVAL-----ADDRV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + G T GHR H P + + S Y DL A ++ R +I Sbjct: 174 LPLAYFGVQAGRETLGHRVHHPQAVAIASATSYEADLRGAHIISSHAARMESIRAQVEAK 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+A+G V LL E+ L EW GSFD++YL +P+E++ T++ NQK F Sbjct: 234 AAALGGVAVIPPALLAEVASLTEWPVAIAGSFDERYLAVPQEVLITTMQDNQKTFAVVGA 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G + FI V+N++++D AA+ +GN +V+ R DA FW++D Sbjct: 294 DGKIRPHFIAVANLESAD-EAAVRKGNEKVIRPRFADAEFFWQQD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L + RL+ VV+ K+G+ + R+ LG+ +A + AD V A Sbjct: 338 -----LKHKLADYLPRLE--HVVYQEKLGSVAAKTRRLEALGRALAPVCGADADNVATAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +SK+DL TE+V EFPELQG +G+ YA + A++E +PRG +P + + Sbjct: 391 HISKSDLLTEMVMEFPELQGLMGRYYAAAEGYAADIAAALDEQYQPRGAGGALPQTRTGL 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------- 528 +++A+KLDTL+ +AI KP+GSKDPYALRR + +IR+I EN++ +PL+ + Sbjct: 451 ALAIAEKLDTLVGGFAIGAKPTGSKDPYALRRMAISLIRLITENELALPLAAWLDKSAAQ 510 Query: 529 --------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 I + + +RL + ++ IR + +A+L +D+L+ I I+ L+ F Sbjct: 511 YDAALGAPIHVAAVREYILERLDSHYREQGIRSETCQAVLALGSDDLVDIERRIRALDAF 570 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S L SAKRI IL KKN E + L AE+ L+ D ++ Sbjct: 571 AGSPSATSLLASAKRIRNIL----KKNGERDGAVQTALLQEPAEQALWQAWQDKQPAFEQ 626 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ Y + L ++ P++ FF V+V DD ++ NRL+LL ++ + ++ Sbjct: 627 ALVAGDYRAALEQLATLGAPLDAFFTDVMVMSDDPALQQNRLALLTTLQRGFDQIADLS 685 >gi|17231603|ref|NP_488151.1| glycyl-tRNA synthetase subunit beta [Nostoc sp. PCC 7120] gi|25009306|sp|Q8YPT0|SYGB_ANASP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|17133246|dbj|BAB75810.1| glycyl-tRNA synthetase beta chain [Nostoc sp. PCC 7120] Length = 716 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 198/744 (26%), Positives = 324/744 (43%), Gaps = 73/744 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L + +++ Y TP RL + + GL Sbjct: 1 MPGFLLEVGTEELPASFLGGAIAQWRSRIPQSLAANSLTSESVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G A GF + G++ + D KG+ + Sbjct: 61 SQQPDREEEIKGPPAQAAFKDGQPTPAAVGFAKKQGVELEALEVRPTD--KGEFVFIQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + D+L +VP I + + MRW + RP++ ++ +L + Sbjct: 119 TPGRPVADILTELVPQWIYSLEGKRLMRWGDGD-----VRFSRPIRWLVALLDEAILPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ L + I+YGHR P PI +Q Y+ L + V ++ + R I Sbjct: 174 LVNGSLT-VKSDRISYGHRVLHPAPITIQKAGDYVNTLRDGYVTVNAKERTTTIKEQVAA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +G DLLEE+ LVEW +G F++++L LP E+ + ++Q+ F Sbjct: 233 TVQKLGGYTEIYPDLLEEVTNLVEWPSPVVGKFEEEFLNLPTEVTTTVMVSHQRYFPVFK 292 Query: 295 --REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI VSN + I GN RV+ ARL D F+K D Sbjct: 293 TGDHKELLPYFITVSNGDPT-KSEVIAVGNERVIRARLADGQFFYKTD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 LSK L+ + +L+ V F +G+ +V RI + +I+ + + D Sbjct: 340 --------LSKSLESYLPQLET--VTFQEDLGSLRGKVERIVKVAAQISSQLQLGEGDRQ 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA +L KADL T++V EFPELQG +G++YAV E+ AI EH PRG + +P Sbjct: 390 NNQRAALLCKADLVTQMVFEFPELQGIMGQKYAVASGESPEVSTAIVEHYLPRGADDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V LAD+LDTL++ + + P+GS DP+ALRRA ++ I + I L+ + Sbjct: 450 QTLTGQVVGLADRLDTLVSIFGLGLIPTGSSDPFALRRAANAVVNITWAANLQINLASLL 509 Query: 530 ED-----------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILRPEN------- 564 L FF R++ L + I +DL+ A+L + Sbjct: 510 AQTVAEFAAQYNKDQAPLITALNEFFLQRIRTLLQEEKQIDYDLVNAVLGENDPEYTERA 569 Query: 565 -DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNREISLEISPQYLLL 621 +LL + D +L + +K + R ++ A + + + + + P+ Sbjct: 570 LQDLLDVRDRALYLQQIRRDGTLDKIYETVNRSTRLAAQGDLDTQQLDPTSVVRPELFQK 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVR 678 +E Y + Q + + + Y + L I + FF D VLV D E++ Sbjct: 630 PSESDFYDALVKLVPQTQAAQESRNYQLLVAGLVEIAPTVSNFFDGADSVLVIDPDPEIK 689 Query: 679 DNRLSLLQYIKNIILIVINVQKIV 702 NRL++L ++N ++ + IV Sbjct: 690 RNRLNILGLLRNHARVLADFGAIV 713 >gi|323143408|ref|ZP_08078093.1| glycine--tRNA ligase, beta subunit [Succinatimonas hippei YIT 12066] gi|322416813|gb|EFY07462.1| glycine--tRNA ligase, beta subunit [Succinatimonas hippei YIT 12066] Length = 688 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 213/709 (30%), Positives = 331/709 (46%), Gaps = 62/709 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 P + K A+ L + L + G+ + + + Y TP RL L +K L ++ E GP Sbjct: 16 PPKALRKLAQALHDDFVKHLNQAGLKFSSAQWYATPRRLALIIKDLETKQADREIEIKGP 75 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 V G KA G+ + G+ ++K D KG+ K ++ Sbjct: 76 AVKAAFDANGNPTKAAIGWATANGITVDQADRLKTD--KGEWLYIKSVKHGSDTATLIPQ 133 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + A+ +P PK M W ++RP+ ++ + K+I+ ++ + Sbjct: 134 MFKEALSALPIPKLMHWGDKKE-----EFVRPVHTLCMLF-----GNKLIEGNILGVSSS 183 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 GHRF + V S D Y+ L+ E V+ + + R+ +I + +LAS++ Sbjct: 184 KTIKGHRFMGQQTLTVDSADSYLSQLKDEGAVIANYDERKASIRSQVEKLASSINGVADL 243 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D LLEE+ LVE VF+ SF+ ++L +P E + T+K +QK F +G L F Sbjct: 244 DDALLEEVTSLVENPHVFLASFEDRFLKVPSEALVYTMKGDQKYFPIYDGQGKLLPKFAF 303 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 VSNI SD A I GN RVV RL DA F+ D+ + L Sbjct: 304 VSNINPSDTTALI-SGNERVVRPRLSDAEFFFNTDRK--------------------QSL 342 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 + RL+ +V+ IGT R + L IA LI+AD L +RA L+K DL T Sbjct: 343 ESFFPRLET--IVYQKDIGTIAYRSEIVGKLAAYIASLINADPQLCERAAHLAKCDLATT 400 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF + QG +G YA L E+ + +AI E PR + +PT + I VSLA+KL T Sbjct: 401 LVTEFTDTQGIMGMHYAELDGEDQNVAEAIFEQYLPRFAGDKIPTKPVQIAVSLAEKLTT 460 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------------- 531 LI + IN P G KDPY LRRA +G+IRI++ENK+D L I Sbjct: 461 LIGIFGINLLPKGDKDPYGLRRAAIGLIRIVIENKLDFDLVDVINQGCELLKDKFKADNT 520 Query: 532 -QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +N+ + RLK Y D++I ++ A+L NLL IK + +F + Sbjct: 521 GKNVADYIFGRLKAYYQDQNIGGEIFAAVLSTHPTNLLDFDKRIKAVVKFKELPEATDLA 580 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KR+ IL+ EK + EI L +AE +L ++ I E +H Y + Sbjct: 581 SAYKRVANILSKNEKHDGEIMT----NLLKEDAEIKLVDHLNHLLPVIDELYNHGDYERA 636 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L + E ++ FF+ V+VNV+D +V+ NR+++LQ + + ++ Sbjct: 637 LTTLAELKEDVDGFFEHVMVNVEDPQVKANRIAILQKLNAVFSKTADIS 685 >gi|256956684|ref|ZP_05560855.1| glycyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256947180|gb|EEU63812.1| glycyl-tRNA synthetase [Enterococcus faecalis DS5] gi|315035616|gb|EFT47548.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0027] Length = 694 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 349/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSESFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|256763100|ref|ZP_05503680.1| glycyl-tRNA synthetase [Enterococcus faecalis T3] gi|256684351|gb|EEU24046.1| glycyl-tRNA synthetase [Enterococcus faecalis T3] gi|315173670|gb|EFU17687.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1346] Length = 694 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 349/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|186684136|ref|YP_001867332.1| glycyl-tRNA synthetase subunit beta [Nostoc punctiforme PCC 73102] gi|186466588|gb|ACC82389.1| glycyl-tRNA synthetase, beta subunit [Nostoc punctiforme PCC 73102] Length = 717 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 199/745 (26%), Positives = 334/745 (44%), Gaps = 74/745 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L+ + ++++ Y TP RL + +KGL Sbjct: 1 MPAFLLEVGTEELPASFLSDALIQWRERIPQSLEANSLQGESVQVYGTPRRLAVLIKGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP G A GF + G++ D + KG+ R Sbjct: 61 SQQADREEEIKGPPAQAAFKDGQPTAAALGFAKKQGVEL--DALFLRPTDKGEFVFVQKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L +V I + + MRW + RP++ ++ +L + Sbjct: 119 IPGRPVAEILTELVQEWIWGLEGKRLMRWGDGDG-----RFSRPIRWLVALLDETVLPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ K I I+ GHR P P+ + Y+ L+ A V +DPE R N I Sbjct: 174 LVNGS-KTIQSDRISQGHRVLHPEPVTIAQATDYVTALKSAYVTVDPEERENLIKEQVKA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR- 293 +A ++ V DLL E+ LVE+ +G F+ ++L LP E+I + T+Q+ F Sbjct: 233 VAESLSGYTVIYPDLLAEVTNLVEYPSTVVGKFEPEFLELPTEVITEVMVTHQRYFPVFK 292 Query: 294 --TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + E L FI +SN + GN RV+ ARL D F++ D Sbjct: 293 PGSSEQELLPNFITISNGDPK-KSDIVAVGNERVIRARLADGRFFYEAD----------- 340 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADV 408 L+KP+D + +L+ V F ++G+ ++ R+ + ++I+ + + Sbjct: 341 ---------LTKPIDSFLPQLE--KVTFQEELGSVRTKIDRVVKIAEQISTQLKLAENQS 389 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA +L KADL T++V EFPELQG +G++YA+ E+ AI +H P G +N+ Sbjct: 390 QKIQRAALLCKADLVTQMVYEFPELQGIMGEKYALASGEDAEVAKAIYQHYLPTGAGDNL 449 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P V LAD+LDTL++ + + PSGS DP+ALRRA +++I + I L Sbjct: 450 PETLTGQIVGLADRLDTLVSIFGLGLIPSGSSDPFALRRAANAVVKITWFYNLPINLDDL 509 Query: 529 IED-----------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILRPEN------ 564 + L FF R++ L + I +DL+ A+L + Sbjct: 510 LAQIATDFAAKYQKDRASLTTALQEFFLQRIRTLLQEEKQIDYDLVNAVLGENDPEYTER 569 Query: 565 --DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNREISLEISPQYLL 620 +LL + D +L + S + + + R ++ A + K E + + P+ Sbjct: 570 TLKDLLDVRDRALYLQQIRSDSILDNIYETVNRSTRLAAQGDLDTKQLEPTSVVRPELFQ 629 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREV 677 +E+ LY + + Q + + Y + L I + FF D VLV D E+ Sbjct: 630 KPSEEALYNALIESVPQTQTAQQTRNYQLLVAALAKIAPTVSNFFDGPDSVLVMDSDPEI 689 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 + NRL LL ++N ++ + IV Sbjct: 690 KRNRLHLLGLVRNHARVLADFGAIV 714 >gi|229549421|ref|ZP_04438146.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis ATCC 29200] gi|255972125|ref|ZP_05422711.1| glycyl-tRNA synthetase [Enterococcus faecalis T1] gi|300860883|ref|ZP_07106970.1| glycine--tRNA ligase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|307277160|ref|ZP_07558264.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2134] gi|312953486|ref|ZP_07772326.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0102] gi|229305658|gb|EEN71654.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis ATCC 29200] gi|255963143|gb|EET95619.1| glycyl-tRNA synthetase [Enterococcus faecalis T1] gi|295113460|emb|CBL32097.1| glycyl-tRNA synthetase beta chain [Enterococcus sp. 7L76] gi|300849922|gb|EFK77672.1| glycine--tRNA ligase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|306506090|gb|EFM75256.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2134] gi|310628695|gb|EFQ11978.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0102] gi|315146682|gb|EFT90698.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4244] gi|315152153|gb|EFT96169.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0031] gi|315159084|gb|EFU03101.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0312] Length = 694 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 349/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|261365485|ref|ZP_05978368.1| glycyl-tRNA synthetase, beta subunit [Neisseria mucosa ATCC 25996] gi|288566017|gb|EFC87577.1| glycyl-tRNA synthetase, beta subunit [Neisseria mucosa ATCC 25996] Length = 687 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 215/707 (30%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGEAEFTAYASPRRLAVQIKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGVPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+D+ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVL-----HGDDIVDVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALSEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +R L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERTARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTL 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVADGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAEQMNAVADI 682 >gi|260753970|ref|YP_003226863.1| glycyl-tRNA synthetase subunit beta [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553333|gb|ACV76279.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 682 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 246/707 (34%), Positives = 378/707 (53%), Gaps = 47/707 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPA +Q A E L+ +L LKE G+ + +Y TP R+ L ++ L Sbjct: 1 MADFLLELRSEEIPAGLQKMAVEKLAELLSSTLKEAGINPTKIEKYATPRRIALLMRDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPR A +KA+ GFLRSTGL + ++++ P KG+ Y A + KP + + Sbjct: 61 AKTEAVQEERRGPRADAPEKALAGFLRSTGLTK-EELELRETP-KGNFYYAHIEKPGQTL 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +L +P I+ PWPKSMRW + + W+RPLK I+ + E++I ++L Sbjct: 119 IALLGEAIPAIIKTFPWPKSMRWGNFSASSESLRWVRPLKGIVAL-----IDEQLIPIEL 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GH FH P + + Y + A V++D + R I ++A + A G Sbjct: 174 DGITSGTETKGHPFHHPDIVTLAKASDYPEKMAAAHVMIDFDARVQKITDEARKAAQKAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L+ED L +E GL EW +G FD+ YL +P E+I+LT++TNQK F R LA Sbjct: 234 LTLIEDAALAQENAGLTEWPVPLLGRFDEAYLAVPREVIQLTMRTNQKYFACTDRNQDLA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V++++A DGG I QGN +V++ARL DA FW++D Sbjct: 294 AVFICVADMEAQDGGKEITQGNEKVLSARLADARFFWEQD-------------------- 333 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L PL+ + RLD V+F+ +G+ G++ RI L IA I AD +RA +L+KA Sbjct: 334 LKIPLEDWLPRLD--SVLFYEGMGSVGDKAKRIAHLSGYIADQIGADRKQAERAGLLAKA 391 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA NE A+ + VSLA Sbjct: 392 DLASNMVGEFPELQGVMGGYYAKAGNEAPDVVSAVSGQYQAEAGAGVA------AAVSLA 445 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QN 533 D++D+L F+ N +P+GSKDP+ALRRA + II+ I+ +++ +PL+ E ++ Sbjct: 446 DRIDSLACFFVRNIRPTGSKDPFALRRAAVQIIQTIIAHQLRLPLTPLFEKAGAGDQIES 505 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ F +RLK+ + IR+DLI+A+L D+++ ++ ++ L F S G L Sbjct: 506 LLAFITERLKVQQREAGIRYDLIDAVLALGYEDDVIRLLARVQALQSFIESEDGSDLLAG 565 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 +R IL E + +IS + + E+ L + +++++ + Y Sbjct: 566 YRRAVNILKGSEASEK---GDISQEDIEQP-EQDLQKALQAIEAPLEQALKAEDYAAAMT 621 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L S+ +PI+ FFD+V+VN D +R RL+LL+ I+ + V + Sbjct: 622 ALASLRQPIDQFFDKVIVNHDKAGIRSRRLALLEQIRTAMHQVADFS 668 >gi|315170296|gb|EFU14313.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1342] Length = 694 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 KTAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|307290542|ref|ZP_07570454.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0411] gi|306498397|gb|EFM67902.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0411] Length = 694 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + I ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKIGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|257084566|ref|ZP_05578927.1| glycyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|307287714|ref|ZP_07567757.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0109] gi|256992596|gb|EEU79898.1| glycyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|306501452|gb|EFM70755.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0109] gi|315164813|gb|EFU08830.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1302] Length = 694 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|56552340|ref|YP_163179.1| glycyl-tRNA synthetase subunit beta [Zymomonas mobilis subsp. mobilis ZM4] gi|241761604|ref|ZP_04759691.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543914|gb|AAV90068.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ZM4] gi|241373912|gb|EER63445.1| glycyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 682 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 246/707 (34%), Positives = 378/707 (53%), Gaps = 47/707 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPA +Q A E L+ +L LKE G+ + +Y TP R+ L ++ L Sbjct: 1 MADFLLELRSEEIPAGLQKMAVEKLAELLSAKLKEAGINPTKIEKYATPRRIALLMRDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EER GPR A +KA+ GFLRSTGL + ++++ P KG+ Y A + KP + + Sbjct: 61 AKTEAVQEERRGPRADAPEKALAGFLRSTGLTK-EELELRETP-KGNFYYAHIEKPGQTL 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +L +P I+ PWPKSMRW + + W+RPLK I+ + E++I ++L Sbjct: 119 IALLGEAIPAIIKTFPWPKSMRWGNFSASSESLRWVRPLKGIVAL-----IDEQLIPIEL 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GH FH P + + Y + A V++D + R I ++A + A G Sbjct: 174 DGITSGTETKGHPFHHPDVVTLAKASDYPEKMAAAHVMIDFDARVQKITDEARKAAQKAG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L L+ED L +E GL EW +G FD+ YL +P E+I+LT++TNQK F R LA Sbjct: 234 LTLIEDAALAQENAGLTEWPVPLLGRFDEAYLAVPREVIQLTMRTNQKYFACTDRNQDLA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V++++A DGG I QGN +V++ARL DA FW++D Sbjct: 294 AVFICVADMEAQDGGKEITQGNEKVLSARLADARFFWEQD-------------------- 333 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L PL+ + RLD V+F+ +G+ G++ RI L IA I AD +RA +L+KA Sbjct: 334 LKIPLEDWLPRLD--SVLFYEGMGSVGDKAKRIAHLSGYIADQIGADRKQAERAGLLAKA 391 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA NE A+ + VSLA Sbjct: 392 DLASNMVGEFPELQGVMGGYYAKAGNEAPDVVSAVSGQYQAEAGAGVA------AAVSLA 445 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QN 533 D++D+L F+ N +P+GSKDP+ALRRA + II+ I+ +++ +PL+ E ++ Sbjct: 446 DRIDSLACFFVRNIRPTGSKDPFALRRAAVQIIQTIIAHQLRLPLTPLFEKAGAGDQIES 505 Query: 534 LILFFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 L+ F +RLK+ + IR+DLI+A+L D+++ ++ ++ L F S G L Sbjct: 506 LLAFITERLKVQQREAGIRYDLIDAVLALGYEDDVIRLLARVQALQSFIESEDGSDLLAG 565 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 +R IL E + +IS + + E+ L + +++++ + Y Sbjct: 566 YRRAVNILKGSEASEK---GDISQEDIEQP-EQDLQKALQAIEAPLEQALKAEDYAAAMT 621 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L S+ +PI+ FFD+V+VN D +R RL+LL+ I+ + V + Sbjct: 622 ALASLRQPIDQFFDKVIVNHDKAGIRSRRLALLEQIRTAMHQVADFS 668 >gi|227519875|ref|ZP_03949924.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0104] gi|229545173|ref|ZP_04433898.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1322] gi|256853767|ref|ZP_05559132.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T8] gi|256963574|ref|ZP_05567745.1| glycyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|257079639|ref|ZP_05574000.1| glycyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294780919|ref|ZP_06746273.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis PC1.1] gi|307270837|ref|ZP_07552124.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4248] gi|307271513|ref|ZP_07552785.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0855] gi|312905129|ref|ZP_07764250.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0635] gi|227072669|gb|EEI10632.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0104] gi|229309718|gb|EEN75705.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1322] gi|256710710|gb|EEU25753.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis T8] gi|256954070|gb|EEU70702.1| glycyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|256987669|gb|EEU74971.1| glycyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294452045|gb|EFG20493.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis PC1.1] gi|306511785|gb|EFM80783.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0855] gi|306512750|gb|EFM81395.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4248] gi|310631519|gb|EFQ14802.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0635] gi|315030215|gb|EFT42147.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4000] Length = 694 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|256847129|ref|ZP_05552575.1| glycyl-tRNA synthetase beta subunit [Lactobacillus coleohominis 101-4-CHN] gi|256715793|gb|EEU30768.1| glycyl-tRNA synthetase beta subunit [Lactobacillus coleohominis 101-4-CHN] Length = 690 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 201/734 (27%), Positives = 349/734 (47%), Gaps = 78/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + L + LK++ + + +++Y TP RL L + GL Sbjct: 1 MANSYLLEVGVEEMPAHVVTPSIHQLHERVAKYLKDQRIDFTEIQEYATPRRLALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G +I+ KG Y+ V Sbjct: 61 SDQQPDIDESVKGPAKKIAQDQDGNWTKAAIGFTRGQGATVD---EIEFKEVKGTEYVFV 117 Query: 113 LRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +VLK +P I + +P M+W +IRP++ ++ +L Sbjct: 118 EKHIAGKPVAEVLKG-LPDVITSMNFPTLMKWGYHD-----LQFIRPIRWLVSLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + ++ G T GHRF HP+ + + D Y + L + V+ D R++ I Sbjct: 167 NDEVVPFSILDVTAGRQTQGHRFLG-HPVDIATADDYEQTLHDDFVIADQGKRKDLIKKQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + ++ D DLLEE+ LVEW F GSFD+KYL LPE ++ ++K NQ+ F Sbjct: 226 ITEIIDQHQWQIDWDADLLEEVNNLVEWPTAFAGSFDEKYLALPEPVLITSMKDNQRFFC 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R ++G L FI V N + +++GN RV+ RLEDA F+ DQ Sbjct: 286 LRDQDGKLLPHFISVRNGN-REHLENVIKGNERVLVPRLEDAQFFYDEDQKL-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 +DQ + RL V FH +I + ++++R ++ K + + ++ + Sbjct: 337 ------------TIDQYVERLK--KVSFHDQISSMADKMARTAIIAKLLGEKLNLTDQEQ 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA + K DL T++V EF ELQG +G+ YA L E A+ EH P + Sbjct: 383 ADLQRAAQIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKADVAAAVREHYMPISAEGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--- 525 P KI +++ADKLD++ +F+ PSGS DPYALRR GI+RI+ + + +PL Sbjct: 443 PQTKIGAILAIADKLDSIFSFFGAGMIPSGSNDPYALRRQAYGIVRIVADRQWHLPLLAM 502 Query: 526 -----------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + FF DRLK + ++RHD+++A+ + +L+ Sbjct: 503 QKEIAEQIQQSDMQLKFDYLKNADQVNNFFMDRLKQFFAGENLRHDIVDAVTKTNQADLV 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I++ +N+ S + + + + R+ ++ +K + S E++P +E +L+ Sbjct: 563 NIIEAAAAINDQKSDDEFKDDIEALTRVIRLA----QKGQPTSSEVNPGLFQNPSEAKLH 618 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + E + L S+ I +FD+ ++ D +V++NRL+ LQ I Sbjct: 619 EATKQLQSKFAELP----LAEALHQLRSLAPIITEYFDENMIMDKDPQVQNNRLAQLQQI 674 Query: 689 KNIILIVINVQKIV 702 + + ++ +++ Sbjct: 675 ARMTQVFGDLNQLI 688 >gi|304403966|ref|ZP_07385628.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus curdlanolyticus YK9] gi|304346944|gb|EFM12776.1| glycyl-tRNA synthetase, beta subunit [Paenibacillus curdlanolyticus YK9] Length = 693 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 198/732 (27%), Positives = 335/732 (45%), Gaps = 70/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A L L L E + + + Y TP RL + ++ + Sbjct: 1 MAKDLLFEIGLEEVPARFVRAAVNQLRDKLAKWLDESRISHGEVEAYATPRRLAVLVREV 60 Query: 60 SPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA- 111 + + EE GP G KA GF +S G++ Q+ G Y+ Sbjct: 61 AEKQSDVNEEVKGPSRKIAQDAEGQWSKAALGFAKSQGVEP---EQLFFKELAGVEYVYG 117 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 VL + + + +PKSMRW + ++RP+K ++ + + Sbjct: 118 NKSSVGVETASVLTEGLTAIVTSMTFPKSMRWGSYD-----LKFVRPIKWLVAMFGS--- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I+ L+L + GN+T GHRF +++ Y+ L V+ D R I+ Sbjct: 170 --QIVPLELAGVQSGNVTRGHRFLGAET-TIETPSSYVEALRAQHVIADIAEREAEIVRQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA G E+ +DLLEE++ LVE V G+FD +L +P+E++ +++ +Q+ F Sbjct: 227 IEALAQEQGWEIAVKEDLLEEVLFLVETPSVLFGTFDPSFLQIPQEVLITSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L F+ V N + + +GN +V+ ARL DA F+ DQ Sbjct: 287 VLDKAGKLLPFFVTVRNGDRT-SLDVVAKGNEKVLRARLSDAKFFYAEDQKLA------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--- 408 + + +L+ +V+H ++GT ++V RIR + ++A + AD Sbjct: 339 -------------ISDALQKLET--IVYHEELGTVADKVRRIRAIADQMAAHVQADASAV 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + RA +SK DL T++V EFPELQG +G++YA E + AI EH +PR + Sbjct: 384 ADISRAADISKFDLVTQMVYEFPELQGIMGEDYARKAGEREAVAVAINEHYQPRFAGDRA 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +SL+DK+DT++ ++I P+GS+DPYALRR GI++ IL + + L Sbjct: 444 PASLAGAVISLSDKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQTILAQGLPLALGDL 503 Query: 529 IEDQNLIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + FF R+K L ++ +R+D+++A++ D+L Sbjct: 504 FDIALAVHEQRGLKRPAAEVRKELYEFFGLRVKNVLTEQGVRYDVVDAVMAAGFDDLKLT 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 V+ L + + +F + ++ + K E+ + P AE+ LY Sbjct: 564 VERASVLIGRAAGEEKNEFKTVVEAFNRVNNLAAKAESEV---VDPALFAEPAEQALYEA 620 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 E + +LL ++ EPI +FD V+V +VR NRL+ L + + Sbjct: 621 WKTAHPAYAERFRNGDIAGALELLAALKEPITAYFDSVMVMAQQEDVRRNRLATLAGLSS 680 Query: 691 IILIVINVQKIV 702 I+ + + K+V Sbjct: 681 DIVKLADFAKLV 692 >gi|315032900|gb|EFT44832.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0017] Length = 694 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|317485411|ref|ZP_07944290.1| glycyl-tRNA synthetase beta subunit [Bilophila wadsworthia 3_1_6] gi|316923370|gb|EFV44577.1| glycyl-tRNA synthetase beta subunit [Bilophila wadsworthia 3_1_6] Length = 695 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 192/728 (26%), Positives = 333/728 (45%), Gaps = 62/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+P+R ++L+ LKE G + + TP R + ++GL Sbjct: 1 MSTFVLEIGTEELPSRFLSNVEKELADRFTAGLKEAGYTFSLLDTCATPRRSVVIVEGLE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E +GP G KA GF ++ G+ + + + + KG+ + Sbjct: 61 DTQPVREELVMGPPARIAFDAEGNPTKAAQGFAKTLGIDVSALGRTQTE--KGEYLSGMK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + DVL + P I +P+ K MRW F++ RP++ +L +L + Sbjct: 119 KTGGVPTLDVLAGLCPAIIAALPFAKRMRWGDGE-----FAFARPIRWVLALL-----GD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 ++ ++ ++ G +T GHR P P +++ Y+ + +E V L RR I+++ Sbjct: 169 VVVPFEVGKVASGRVTQGHRVLGPGPFTIKTAGDYVPTIVKEGAVQLKAAERRAYIVSEG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +R+A AV +++ LL+E+ GLVE +G FD +L LP E++ +++ +QK F Sbjct: 229 NRIAEAVNGKIIWIDGLLDEVQGLVECPVPLLGDFDPSFLELPREVLLTSMQEHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L F+ V N+ D + + +G RV+ ARLED FWK D Sbjct: 289 EDASGNLMPHFLTVLNLHPKD-LSLVKKGWERVLRARLEDGRFFWKTD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L D+ + LD V F A +G+ GE+ RI L + +A+ + D Sbjct: 336 --------LEATFDEWLEALDA--VTFLAPLGSMGEKTRRISALCRWLAEKVQQDPEQAA 385 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL + +V EF LQG +G YA + E + A+ E P GP VP + Sbjct: 386 RAGRLSKADLVSAMVGEFDTLQGIMGGIYARKKGETEAVAAALAEQYLPSGPDSPVPATE 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + +S+ADK+DTL+ + + P+G+ DPYALRR LGI RI+LE + + E+ Sbjct: 446 LGSILSIADKVDTLVGCFGLGMIPTGAADPYALRRCALGITRIMLERGYRFDVKELFEEA 505 Query: 533 NLI------------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + FF R+K Y + L+EA+ + DN+ + + Sbjct: 506 QRLYGDRKWKLAPAEAIAKLNDFFIARVKNYFLTQGKETLLVEAVTAVDPDNVWALGRRL 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVISD 633 L + + KR+ I+ + + ++ + L AE L + Sbjct: 566 GALESMSRQDDFPQAAQTFKRVANIIRKQGHEAGVDLQGTWKRELLQEPAEMALAEALEK 625 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + + + +L ++ ++ FD+V+V +D +R NRL++L+ + + Sbjct: 626 MFAAFEAAWANDDFEALFSMLAALRPAVDELFDKVMVMCEDPALRANRLNMLKALTLRME 685 Query: 694 IVINVQKI 701 + + + Sbjct: 686 RLADFSAL 693 >gi|257416645|ref|ZP_05593639.1| glycyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257421951|ref|ZP_05598941.1| glycyl-tRNA synthetase subunit beta [Enterococcus faecalis X98] gi|257158473|gb|EEU88433.1| glycyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|257163775|gb|EEU93735.1| glycyl-tRNA synthetase subunit beta [Enterococcus faecalis X98] gi|315155340|gb|EFT99356.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0043] Length = 694 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + E+ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLEVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|291278668|ref|YP_003495503.1| glycyl-tRNA synthetase subunit beta [Deferribacter desulfuricans SSM1] gi|290753370|dbj|BAI79747.1| glycyl-tRNA synthetase, beta subunit [Deferribacter desulfuricans SSM1] Length = 682 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 223/727 (30%), Positives = 358/727 (49%), Gaps = 72/727 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LEI +EEIPA + AA L L++ + Y ++ TP RLFLY++ +S Sbjct: 1 MSFYILEIGTEEIPASFINPAANFLKEHFKNELEKNRINYSSIESGGTPRRLFLYIENIS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE GP G K GF +S GL + +K D KG+ + Sbjct: 61 DRQADLEEEIKGPPANIAFDENGNLTKTALGFAKSKGLDVNTLRSVKTD--KGEYLVGTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++LK +V I+ P+PKSM+W + + RP+ L I Sbjct: 119 KVKGEDTVNILKNLVVQTIKNFPFPKSMKWGDKN-----LRFARPIHWFLSIYNG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K+++ +++ I GN T+GHRF A IK+ S D Y L+E V++D R+ I + + Sbjct: 169 KVLEFEIEGIKAGNYTFGHRFMANKQIKISSFDEYKAKLKENFVIVDFNERKEIIRSFLN 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + D+DLL+ + LVE+ +G F + +L LP+E++ ++K +QK F R Sbjct: 229 NI-----GNVFIDEDLLDTVANLVEYPHPILGEFPEHFLQLPKEVLITSMKNHQKYF-YR 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + N F+ +SN + D + I G RV+ ARL DA+ F++ D+ Sbjct: 283 EKDGKILNSFVGISNTKPKDD-SLIKSGYERVLKARLNDAMFFFENDKKV---------- 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV-D 412 PL++RM +L VV+ ++GT E++ R R + +A+ + + A D Sbjct: 332 ----------PLEERMEQLK--KVVYQEQLGTSYEKMERFREIALFLAKKLAPNKATTTD 379 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L KADL TE+V EFPELQG +G+EYA++Q E DAI EH PR + +P Sbjct: 380 RAAFLCKADLMTEMVYEFPELQGVMGREYALIQGEEQLVADAIFEHYLPRFSGDELPKTD 439 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 +S+ADK+DT+ + I P+G+ DPYALRR +GII IIL + L++ +E Sbjct: 440 EGAFISIADKIDTITGCFIIGLIPTGNNDPYALRRNAIGIINIILNKNYRLSLTELLEKA 499 Query: 532 ----------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLI 574 + F R K + +IR D+ EA++ D+++ I + Sbjct: 500 IDNYKDKLSYQKEEILEKTKEFILTRAKQIATSQYNIRADVFEAVVAV-FDDIVQIFNAA 558 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K LNE + + S KRI KN + E L+ EK L +I + Sbjct: 559 KALNEVYEKPEFVTLSTSYKRIS----NILNKNNWNNTEYKEDLLVESEEKELNKLIKEN 614 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + ++Y+ ++L S +P++ FFD VLV + E+R+NRLSLL +K + Sbjct: 615 EEKLNQLLSEEKYNDAINVLLSFSKPVDNFFDNVLVMDKNEEIRNNRLSLLAKLKTLFEK 674 Query: 695 VINVQKI 701 + + I Sbjct: 675 IGELSLI 681 >gi|104774141|ref|YP_619121.1| glycyl-tRNA synthetase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423222|emb|CAI98050.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 697 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 211/731 (28%), Positives = 351/731 (48%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI EE+PA + K+ + L LKE G+ ++ ++ Y TP RL + +K L Sbjct: 12 KDFLFEIGVEEMPAHVVSKSVKQLVDRTGKFLKENGLGFKEIKTYSTPRRLTVLVKELDE 71 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF R G+ D ++ Y+ V + Sbjct: 72 KQADVDEVKKGPAKKIAQDADGNWTKAAVGFARGQGMSA-DDIYFEELKGVEYAYVHVQK 130 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K E +L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 131 AGKEAKEILLG--LDEVIKAMTFPTKMRWDSQD-----FEFVRPIHWLVALYGSE----- 178 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ +I G T GHRF + + + D Y+ L + V++D + R++ I++ + Sbjct: 179 VVPVEFLDITAGRKTAGHRFLG-DSVVLANADDYVEALRDQYVIVDADERKDMIVSQIND 237 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ ++ D LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 238 LVNSHNWQIKLDASLLEEVNKLVEYPTVFAGSFDQKYLEIPDEVLITSMKDNQRYFEVYD 297 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +EG L NCFI V N D ++ GN +V+ ARL+DA+ F+ D+ Sbjct: 298 QEGKLINCFISVRNGN-KDHLENVISGNEKVLVARLDDAVFFYDEDRKY----------- 345 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 P+ + R+D V FH KIG+ E+++R+R++G +A+ +VA Sbjct: 346 ---------PISHFVDRMD--SVSFHDKIGSMAEKMTRVRIIGYYLAKRFGLSAEEVADF 394 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR L K DL T++V EF ELQG +G YA L EN + AI+EH P ++P Sbjct: 395 DRVSGLYKFDLVTQMVGEFAELQGVMGMHYACLAGENENVSVAIKEHYMPTTAEGDLPKT 454 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K+ +S+ADKLDT+I F+ PS S DPYALRR GI+RI+L +P Q Sbjct: 455 KVGALLSVADKLDTIIAFFGAGMIPSSSNDPYALRRYAYGIVRILLNEDWSLPFDQVVPE 514 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ L F DR+K +L + ++D+I+A+L + I+ Sbjct: 515 IVELLSGKTPAKMPQGAEEDKQLADFIRDRIKQFLQKNNYQYDVIDAVLASSEQDPSQIL 574 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + S RI IL + + + P +E+ LY + Sbjct: 575 AAAKVLQQHHDDEAFKPVVESLTRIANILKKAKFSQ---ASPVDPSLFEDRSEQDLYDGV 631 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + K + ++ + ++ I+ +FD ++ D V++NRLS L + ++ Sbjct: 632 EALA-------NVKDHAELYEAFVALQGVIDRYFDVNMIMAKDEAVKNNRLSQLAAVNDL 684 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 685 AKRLGDLSKLV 695 >gi|29376901|ref|NP_816055.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis V583] gi|227553938|ref|ZP_03983985.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis HH22] gi|255975192|ref|ZP_05425778.1| glycyl-tRNA synthetase [Enterococcus faecalis T2] gi|257087438|ref|ZP_05581799.1| glycyl-tRNA synthetase [Enterococcus faecalis D6] gi|307285811|ref|ZP_07565945.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0860] gi|81838860|sp|Q831U3|SYGB_ENTFA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|29344366|gb|AAO82125.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis V583] gi|227176924|gb|EEI57896.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis HH22] gi|255968064|gb|EET98686.1| glycyl-tRNA synthetase [Enterococcus faecalis T2] gi|256995468|gb|EEU82770.1| glycyl-tRNA synthetase [Enterococcus faecalis D6] gi|306502572|gb|EFM71839.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0860] gi|315025406|gb|EFT37338.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2137] gi|315574361|gb|EFU86552.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0309B] gi|315580164|gb|EFU92355.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0309A] Length = 694 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFDV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|257082015|ref|ZP_05576376.1| glycyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256990045|gb|EEU77347.1| glycyl-tRNA synthetase [Enterococcus faecalis E1Sol] Length = 694 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLG-DNVTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|312899836|ref|ZP_07759155.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0470] gi|311293086|gb|EFQ71642.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0470] Length = 694 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 349/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYETKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKSWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|268319375|ref|YP_003293031.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii FI9785] gi|262397750|emb|CAX66764.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii FI9785] Length = 690 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 199/731 (27%), Positives = 345/731 (47%), Gaps = 75/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF+R G+ T D ++ Y+ V + Sbjct: 63 KQEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTT-DDIYFEELKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ D+L + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 122 EGKK-ASDILMGM-SDIVKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIANADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N + + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFISVRNGNS-EYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + ++ Sbjct: 337 ---------PLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDIEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P +P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGEDENVSVAIKESYMPTSAEGELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSDKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N +I +E+ LYA + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRNAN---DIDENLFQDVSEEELYAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + S+ + + I +F+ ++ D +V++NRL+ L + N+ Sbjct: 623 NALEENTDLSIA-----DLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNNL 677 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 678 ADRMGDLSKLV 688 >gi|331701383|ref|YP_004398342.1| glycyl-tRNA synthetase subunit beta [Lactobacillus buchneri NRRL B-30929] gi|329128726|gb|AEB73279.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus buchneri NRRL B-30929] Length = 693 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 203/734 (27%), Positives = 350/734 (47%), Gaps = 76/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI EEIPA + + + L LK++ + + ++ + TP RL LY+ L Sbjct: 1 MANNFLLEIGLEEIPAHVVTPSIKQLKKRASDFLKDQRISFAEIKTFSTPRRLALYITDL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ + GP G KA GF R G I KG Y+ V Sbjct: 61 ADKQPDIDKSVKGPAKKIAQDSDGNWTKAAIGFSRGQGATPDD---ITFKDVKGVEYVFV 117 Query: 113 LRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + ++++L + I + +P M+W T +F ++RP+K ++ +L Sbjct: 118 EKHIAGKSLKEILPGM-KDVITAMTFPTMMKWGTY-----SFEYVRPIKWLVALL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +K+I + ++ +T GHRF I++ + D Y L E V+ D R+ I Sbjct: 167 NDKVIPFKILDVDTDRMTSGHRFLGKD-IELANADEYEEKLTEQYVVADAVKRKELITKQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +++A+ ++ D DLLEE+ LVEW F G+FD+KYL +P+E++ ++K +Q+ F Sbjct: 226 INKIAADNNWQINLDPDLLEEVNNLVEWPTAFFGNFDEKYLAIPDEVLITSMKDHQRFFY 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G L FI V N D +V GN +V+ ARL+DA+ F++ DQ Sbjct: 286 VTDQDGKLLPHFISVRNGNDYD-IQNVVAGNEKVLTARLDDAMFFYQEDQK--------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADV 408 K + + RL V FH KI T E++ R++V+ K + A L + ++ Sbjct: 336 -----------KSIADYVERLK--KVSFHDKISTMYEKMQRVQVISKHLGNLAGLSEQEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 ++RA + K DL T +V EF ELQG +G +YA+L+ E+ + AI EH P + Sbjct: 383 KDLERAASIYKFDLVTGMVGEFAELQGVMGDKYALLKGEDQAVATAISEHYMPISANGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKLD+++ F+A PSGS DPYALRR G++RI+ + +++ L Q Sbjct: 443 PKTNVGSILAIADKLDSILTFFAAGMIPSGSNDPYALRRQATGVVRIVADKQLNFDLDQT 502 Query: 529 --------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + + F DR+K YL D +R+D+ +A+ + N+L Sbjct: 503 LNLLIDREDQASVAPKLDMKAQVPAVSDFVKDRIKQYLDDLGVRYDIADAVTSGSHTNIL 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + K L + + + S R+ +I K +++ + P ++EK L Sbjct: 563 FNIASAKTLQDHKDDPDFKDIIESLTRVQRIAKKGAFKADDLT--VDPALFENDSEKALN 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++ + + L + + I +FD +V D ++++N L L I Sbjct: 621 QAVAAAAKDYTHQSAEEDF----GRLAQLKDKINDYFDATMVMAKDEKLKNNHLRQLTMI 676 Query: 689 KNIILIVINVQKIV 702 N+I+ + ++ K+V Sbjct: 677 ANMIMYLGDLDKLV 690 >gi|163791425|ref|ZP_02185834.1| glycyl-tRNA synthetase, beta subunit [Carnobacterium sp. AT7] gi|159873289|gb|EDP67384.1| glycyl-tRNA synthetase, beta subunit [Carnobacterium sp. AT7] Length = 694 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 204/731 (27%), Positives = 336/731 (45%), Gaps = 71/731 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LLEI EEIPA + +++ L + LKE + + + + TP RL + +K ++ Sbjct: 3 KNLLLEIGLEEIPAHIVTPSSQQLVQKITAFLKENRLEHGEVIPFSTPRRLAVIVKDIAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E GP G KA GF R G T D K VY+ Sbjct: 63 KQEDVQESVKGPAQKIAQDAEGNWSKAAIGFARGQGATT-DDIYFKSIKDVDYVYVDKFI 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + E ++ + I + +P SM W+ F +IRP + +L ++ Sbjct: 122 SGKTVNEILVG--LDKVITSLTFPVSMHWADH-----TFKYIRPFHWLTAML-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I +L +I N + GHRF + Y LE V+ D R+ I+N Sbjct: 170 VIPFELLDIQTANTSRGHRFLGHD-VTFADALAYEETLESVFVIADSTKRKQMIVNQIEE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L A + D++LLEE+ L+E+ F GSFD+KYL LPEE++ ++K +Q+ F R Sbjct: 229 LVKANQWSVSMDEELLEEVNNLIEYPTAFYGSFDQKYLNLPEEVLITSMKDHQRYFGVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG + FI V N A + + +GN +V+ ARL+D F++ DQ Sbjct: 289 SEGAVLPYFISVRNGNA-NHIETVARGNEKVLTARLDDGQFFFEEDQKL----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + RL V FH KIG+ E+++R++ + + I + + ++ + Sbjct: 337 ---------TIAACVERLK--QVTFHEKIGSIYEKMNRVQAIAQLIGKQVGLNETELTDL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA + K DL T +V EFPELQG +G++YA+ Q E + AI EH P +P Sbjct: 386 KRASEIYKFDLVTNMVGEFPELQGIMGEKYALTQGETPAVAAAIREHYMPVSSEGELPKT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 + +++ADKL+++++F+A+ P+GS DPYALRR T GI+RII + P+ E Sbjct: 446 SVGAVLAIADKLESVLSFFAVGMTPTGSNDPYALRRQTYGIVRIIESKNWNFPMESLKEA 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ F R++ L IRHD+I+A L ++LL +V Sbjct: 506 ILSTSVIAQSALFEGYKSSTAEVVDFIKARIRQLLLAESIRHDVIDAALNSRQEDLLKLV 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + +N S + + + R+ + E + L + P +E+ LY Sbjct: 566 EAGRIINSHLSDTIFKPTIEALTRVVNLANKGEAMLDQDQLSVDPALFETNSEQELYEAF 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + Y + IE FF++ +V D++ VR+NRL+LL I + Sbjct: 626 VEIEKTVNNENSKQSYTSF----EQLQPLIEAFFNENMVMADNQAVRNNRLALLMKISSF 681 Query: 692 ILIVINVQKIV 702 +L +V K+V Sbjct: 682 VLSFASVDKLV 692 >gi|227544908|ref|ZP_03974957.1| glycine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300910065|ref|ZP_07127525.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri SD2112] gi|227185120|gb|EEI65191.1| glycine--tRNA ligase [Lactobacillus reuteri CF48-3A] gi|300892713|gb|EFK86073.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri SD2112] Length = 691 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 199/733 (27%), Positives = 357/733 (48%), Gaps = 75/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE+ + + +++++ TP R+ L + GL Sbjct: 1 MANTYLLEVGVEEMPAHVVTPSIKQLHERVEKYLKEQRITFDDIQEFATPRRMALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G I+ KG Y+ V Sbjct: 61 SDKQPDIDESVKGPAKKIAQDADGNWTKAAIGFTRGQGASVED---IEFKEVKGVEYVFV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +P I + +P M+W + +IRP++ ++ +L Sbjct: 118 EKHIAGKTVAEVLQGLPTVITSMNFPTLMKWGYNN-----LQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++ ++ G T GHRF HP+++ D Y L V+ D R+N I + Sbjct: 168 DEVVPFNILDVEAGRETQGHRFLG-HPVEIAKADDYEETLNNDFVIADQTKRKNLIKDQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ + ++ D+DLLEE+ LVEW F GSFD+KYL LP+ ++ ++K NQ+ F Sbjct: 227 TKIINENNWQVDWDEDLLEEVNNLVEWPTAFAGSFDEKYLALPDPVLITSMKDNQRFFCV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R ++G L + FI V N D +++GN RV+ RLEDA F++ DQ Sbjct: 287 RDKDGNLLSHFISVRNGNT-DYLDNVIKGNERVLVPRLEDAQFFYQEDQKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +D+ + RL V FH KI + +++ R+ V+ + + ++ ++A Sbjct: 337 -----------TIDEYVERLK--KVSFHDKISSMYDKMQRVAVIANVLGKQLNLSDEELA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 384 DLDRAAHIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKDDVATAIREHYMPISAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + ++PL Sbjct: 444 QTKIGAVLAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADRGWNLPLLSIQ 503 Query: 530 EDQNLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DR+K H + +RHD+I+A +++ Sbjct: 504 SEIAPAFENAEINVSFDLNKNSDEVRSFFLDRIKQLFHGQKVRHDIIDAATDTRQNDIAN 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I++ I+ +++ ++ + + R+ +I +++ E L + P +E +++ Sbjct: 564 ILEAIQTIDDHKDDDNFKEDIEALTRVLRIAKKDKRPVSE--LVVDPNLFENPSEAKMHT 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +S+ Q+++ L ++ I +FD+ ++ + ++R+NRL+ L + Sbjct: 622 AVSELIKENQQTVSEN-----FAALRTLTPIISEYFDENMIMDKNEDIRNNRLAQLSILA 676 Query: 690 NIILIVINVQKIV 702 N ++ N+ ++ Sbjct: 677 NQASLIGNLDNLI 689 >gi|256961299|ref|ZP_05565470.1| glycyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|293383583|ref|ZP_06629493.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis R712] gi|293387304|ref|ZP_06631860.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis S613] gi|312909479|ref|ZP_07768334.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 516] gi|256951795|gb|EEU68427.1| glycyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|291079095|gb|EFE16459.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis R712] gi|291083202|gb|EFE20165.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis S613] gi|311290152|gb|EFQ68708.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 516] Length = 694 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQVDVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|315166399|gb|EFU10416.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1341] Length = 694 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEVKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|282934650|ref|ZP_06339893.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|281301225|gb|EFA93526.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] Length = 688 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 346/731 (47%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF+R G+ T D ++ Y+ V + Sbjct: 63 KQADIDEIKKGPAKKIALDSEGNFTKAAQGFVRGQGMTT-DDIYFEELKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 122 AGKLATDILLG--MSDIIKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + +I G T GHRF + + + D Y L+ V+ D R+ I+N + Sbjct: 170 VVPVKILDITAGRKTMGHRFLG-DSVILANSDDYEEALKGQFVIADAAERKTMIVNQIDQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 229 LVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 QDGKLINHFISVRNGN-KEFLENVISGNEKVLVARLDDAKFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ ++ Sbjct: 337 ---------PLSHFVSRLD--KVSFHDKIGSMAEKLVRVRIIGEYLAKKFGLSDGVIKNF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT+ Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 ++ +S+ADK D +I F+A P+ S DPYALRR GI+RI+L + + + Sbjct: 446 EVGALLSVADKFDNIITFFAAGMIPTSSNDPYALRRYAYGIVRILLNQNWSLAIDKALPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ + LF DR+K +L + ++D+I+A+L + I+ Sbjct: 506 MVELLDGKTKAKMPKTGQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQTDPSRIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S + + + S RI IL + K + + +E LY Sbjct: 566 AAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELYLAS 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + ++ + S+ + I+ +F+ ++ D V++NRL+ L I + Sbjct: 623 QNLQ-------AIDNFTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINEL 675 Query: 692 ILIVINVQKIV 702 + + K+V Sbjct: 676 ATRLGALSKLV 686 >gi|315161676|gb|EFU05693.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0645] Length = 694 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEVKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEDELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEALNQDVEKYGVLLKEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|227890106|ref|ZP_04007911.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii ATCC 33200] gi|227849550|gb|EEJ59636.1| glycyl-tRNA synthetase beta chain [Lactobacillus johnsonii ATCC 33200] Length = 690 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 199/731 (27%), Positives = 345/731 (47%), Gaps = 75/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSKSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF+R G+ T D ++ Y+ V + Sbjct: 63 KQEDIDEVKKGPAKKIAQDKDGNWTKAAQGFVRGQGMTT-DDIYFEELKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ D+L + ++ + +P MRW + F ++RP+ ++ +L +E Sbjct: 122 EGKK-ASDILMGM-SDIVKAMTFPTKMRWGSYD-----FEFVRPIHWMVSLLDSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ + + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIANADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N + + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFISVRNGNS-EYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + ++ Sbjct: 337 ---------PLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNVSDIEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P +P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLIGEDENVSVAIKESYMPTSAEGELPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPIKDVLPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSDKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N +I +E+ LYA + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRNAN---DIDENLFQDVSEEELYAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + S+ + + I +F+ ++ D +V++NRL+ L + N+ Sbjct: 623 NALEENTDLSIA-----DLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNNL 677 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 678 ADRMGDLSKLV 688 >gi|323481396|gb|ADX80835.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis 62] Length = 694 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 347/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADIEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEVKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTSLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGLKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLKEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|320157808|ref|YP_004190187.1| glycyl-tRNA synthetase subunit beta [Vibrio vulnificus MO6-24/O] gi|319933120|gb|ADV87984.1| glycyl-tRNA synthetase beta chain [Vibrio vulnificus MO6-24/O] Length = 693 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 209/728 (28%), Positives = 345/728 (47%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + H +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEHQADKIVEKRGPAVSAAFDADGNATKAAQGWARGCGITVDQAERMITD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTADIVVELAAKALAGLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + + GHRF + S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIQGEILGVASDRVIRGHRFMGEREFTIDSAEQYPAILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+A+G + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 T + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYTEDKQLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------SKLVDRLPMLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDDLPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +Q +I F R + + D D+I+A+L Sbjct: 505 AKSLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKVLAENV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNL 681 Query: 692 ILIVINVQ 699 L + ++ Sbjct: 682 FLQIADIS 689 >gi|256851184|ref|ZP_05556573.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260660608|ref|ZP_05861523.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 115-3-CHN] gi|297206049|ref|ZP_06923444.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] gi|256616246|gb|EEU21434.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260548330|gb|EEX24305.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii 115-3-CHN] gi|297149175|gb|EFH29473.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] Length = 688 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 346/731 (47%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF+R G+ T D ++ Y+ V + Sbjct: 63 KQADIDEIKKGPAKKIALDSEGNFTKAAQGFVRGQGMTT-DDIYFEELKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 122 AGKLATDILLG--MSDIIKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + +I G T GHRF + + + D Y L+ V+ D R+ I+N + Sbjct: 170 VVPVKILDITAGRKTMGHRFLG-DSVILANSDDYEEALKGQFVIADAAERKTMIVNQIDQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 229 LVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 QDGKLINHFISVRNGN-KEFLENVISGNEKVLVARLDDAKFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ ++ Sbjct: 337 ---------PLSHFVSRLD--KVSFHDKIGSMAEKLVRVRIIGEYLAKKFGLSDGVIKNF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT+ Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 ++ +S+ADK D +I F+A P+ S DPYALRR GI+RI+L + + + Sbjct: 446 EVGALLSVADKFDNIITFFAAGMIPTSSNDPYALRRYAYGIVRILLNQNWSLAIDKALPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ + LF DR+K +L + ++D+I+A+L + I+ Sbjct: 506 MVELLDGKTKAKMPKTGQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQKDPSRIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S + + + S RI IL + K + + +E LY Sbjct: 566 AAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELYLAS 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + ++ + S+ + I+ +F+ ++ D V++NRL+ L I + Sbjct: 623 QNLQ-------AIDNFTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINEL 675 Query: 692 ILIVINVQKIV 702 + + K+V Sbjct: 676 ATRLGALSKLV 686 >gi|238897822|ref|YP_002923501.1| glycine tRNA synthetase, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511926|sp|C4K460|SYGB_HAMD5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229465579|gb|ACQ67353.1| glycine tRNA synthetase, beta subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 689 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 200/720 (27%), Positives = 327/720 (45%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +EE+P + E + L L + + + + + TP RL + + LS Sbjct: 5 TFLVEIGTEELPPKSLRSLVESFAFYLTQELNKAHLDHGEVTWFATPRRLAVKVACLSTI 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ E+ GP + G KA + RS G+ + D KG+ L Sbjct: 65 QKDQKIEKRGPAIAQAYDVDGNPTKAATAWARSCGISLDQAKSLVTD--KGEWLLYSWVL 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L V +A+ ++P K M W + ++RP+ ++ +L +++ Sbjct: 123 PGKSASSLLAEKVKIALSQLPISKLMSWGIHEA-----KFVRPVHTVTLLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHR 234 I + + GHRF ++ D Y + LE+ V+ D R+ I D + Sbjct: 173 ISGIIFGVNSNRKILGHRFMGEPSFIIEHADQYPQILLEKGKVMADFFLRKTQIKTDIEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G +LLEE+ LVEW V F+KK+L +P E + T+K +QK F Sbjct: 233 AAEKIGAIADISDNLLEEVTSLVEWPVVHTAQFEKKFLEVPSEALVHTMKNDQKYFPVYN 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V+NI + D I GN +V+ R DA F++ D Sbjct: 293 KSGQLMPYFIFVANILSQDPPQLIF-GNEKVIRPRFADAQFFFETD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L++R+ L ++F ++GT E+V R++ L IA I A+V +A Sbjct: 338 ------LKQSLEERLPSLKT--ILFQKELGTLYEKVQRVQALSGWIASQIGANVEYSIKA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK+DL T +V EFPE QG +G YA +E AI E +PR +N+P+ ++ Sbjct: 390 GLLSKSDLMTNMVCEFPETQGIMGMHYARYHHEPDEVARAIYEQYQPRFSGDNLPSTLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +V++ADK+DTL + IN+ P G KDP+ LRRA LG++RII+E + + L I + Sbjct: 450 CSVAIADKMDTLTGIFGINQLPKGDKDPFGLRRAALGVLRIIVEKNLPLDLQTLISEAVR 509 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I F R + + + D I+A+L I+ + Sbjct: 510 LYGNKLKNSNLIDQIIEFMLGRFRSWYQEAGHGIDSIQAVLARRPTKPADFNARIQAVTY 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + S KR+ IL+ + I L AE L I + + Sbjct: 570 FRTMNEARALCASNKRVSNILSQSLDIPKN---SIDTGLLKEPAEIELAQNILELEKKLA 626 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y L ++ EP++IFF QV+V V D+++R NRL+LL ++ + L V ++ Sbjct: 627 PFFVAGLYKDALLELVALREPLDIFFKQVMVMVPDQDLRLNRLALLNKLRALFLRVADIS 686 >gi|329572238|gb|EGG53898.1| glycine--tRNA ligase, beta subunit [Enterococcus faecalis TX1467] Length = 694 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 347/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTCPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|312869157|ref|ZP_07729331.1| glycine--tRNA ligase, beta subunit [Lactobacillus oris PB013-T2-3] gi|311095403|gb|EFQ53673.1| glycine--tRNA ligase, beta subunit [Lactobacillus oris PB013-T2-3] Length = 691 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 208/734 (28%), Positives = 363/734 (49%), Gaps = 77/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + L+EE + + ++++ TP RL L ++GL Sbjct: 1 MANSYLLEVGVEEMPAHVVTPSIKQLHQRVADYLQEERISFDEIQEFATPRRLALLIRGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ E GP G KA GF R G I+ KG+ Y+ V Sbjct: 61 ADKQPDVDETVKGPAKKIAQDSDGNWTKAAIGFTRGQGATVDD---IEFREVKGEEYVFV 117 Query: 113 LRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +VL +P I + +P M+W + +IRP++ ++ +L Sbjct: 118 EKHIAGKPVAEVLTG-LPNVITAMNFPTLMKWGYNN-----LQFIRPIRWLVSLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + ++ G T GHRF I++ + + Y +LE+ V++DP R+ I + Sbjct: 167 NDQVVPFSILDVAAGRTTRGHRFLGHD-IELATAEDYEAELEKEFVIVDPLRRKKVISDQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + + +D DLLEE+ LVEW F GSFDKKYL LP+E++ ++K NQ+ F Sbjct: 226 IDAIVEEHDWVIDKDPDLLEEVTNLVEWPTAFAGSFDKKYLVLPDEVLITSMKDNQRFFY 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G L FI V N + I++GN RV+ RLEDA F++ DQ Sbjct: 286 LRDHQGKLLPNFIAVRNGN-KEYLENIIKGNERVLVPRLEDAKFFYEEDQKL-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 +DQ + RL V FH KI + +++ R+ V+ + + + ++ A++ Sbjct: 337 ------------TIDQYVDRLK--KVSFHDKISSMYDKMQRVAVIAQLLGKRLNLSAAEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P ++ Sbjct: 383 ADLDRAAHIYKFDLTTQMVGEFAELQGVMGEIYAKLFGEKDDVAAAIREHYMPISAEGDL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL--- 525 P K+ +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + + L Sbjct: 443 PATKLGAILAIADKLDSILSFFAVDMIPSGSNDPYALRRQAFGIVRIINDRGWHLSLLGI 502 Query: 526 -----------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + FF DRLK + R +RHD+I+A+ END++ Sbjct: 503 QPVLIKAFADSDVAIDFDLTKNAPAVRTFFLDRLKQFFSGRRLRHDIIDAVTDTENDDIE 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 T+ + ++E A + + + R+ +I +K +++++ ++ P +EK+LY Sbjct: 563 TVFEAAAAIDEHKEDADFKDAVEALTRVLRI---SKKGHQDLAAQVDPSLFENPSEKKLY 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +++ + + + L + I +FD+ ++ + VR+NRL+ L I Sbjct: 620 TAVNEVAAGAANRTVAENFAE----LRQLAPVITEYFDENMIMDKNEAVRNNRLAQLAII 675 Query: 689 KNIILIVINVQKIV 702 + ++ N+ ++ Sbjct: 676 ARLARVMGNLNDLI 689 >gi|257090597|ref|ZP_05584958.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis CH188] gi|256999409|gb|EEU85929.1| glycyl-tRNA synthetase beta subunit [Enterococcus faecalis CH188] gi|315579043|gb|EFU91234.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0630] Length = 694 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 347/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVECPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|218777903|ref|YP_002429221.1| glycyl-tRNA synthetase, beta subunit [Desulfatibacillum alkenivorans AK-01] gi|259511920|sp|B8FKD8|SYGB_DESAA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218759287|gb|ACL01753.1| Glycyl-tRNA synthetase, beta subunit [Desulfatibacillum alkenivorans AK-01] Length = 690 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 196/727 (26%), Positives = 335/727 (46%), Gaps = 65/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLEI SEEIPA A E L+ L L+ + + + Y TP RL + L ++ Sbjct: 1 MQPLLLEIGSEEIPAGYIVPALEALAQALDAKLESARIAHSKPKVYGTPRRLAVILDEVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 E +GP G K F G+ + + ++ KG A + Sbjct: 61 EKQESVTTEMVGPPKSVAFDGEGKPKVPAVKFAEKAGVA-VEELTFQETE-KGVYLCAKI 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +L+ ++P I +P+PKSMRW+ ++ RP+ SIL +L + Sbjct: 119 QDEGKETLGILQEMLPEIISHIPFPKSMRWAALPG-----TFARPVFSILALL-----GD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I + + G T GH F AP I +Q+ Y+ LE+A V+ D RR + Sbjct: 169 QVIPFEWNGVTTGRQTRGHYFMAPEAIDIQTPSEYVNALEKAKVIADIPTRRKMVKEGVD 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +G + +ED++L++ + LVE+ G F+ +L +P++++ ++ +QK F + Sbjct: 229 AIAKELGGDAIEDEELVDIVANLVEFPAPVGGKFETGFLEVPDKVLITAMREHQKYFAIQ 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L CF+ V+N Q D + G+ RV+ ARL DA FW D+ Sbjct: 289 DKDGKLMPCFVAVNNTQCKDP-QLVATGHERVLRARLSDAKFFWDVDKK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA--QLIDADVALV 411 + ++ + RLD V+F K+G+ GE+V+R+ + K +A I+ D Sbjct: 337 ---------QSMEDWVKRLDR--VLFQKKLGSVGEKVARVEEMAKFLAAAPEINGDPDKA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A KADL + +V EF +LQG +GK YA L + A+EEH P +P Sbjct: 386 QKAAHFCKADLVSGLVIEFTKLQGVMGKAYASLAGMDAETASALEEHYLPAYSGGPLPRT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 K V++ADK+D+L +A+ PSG++DPYALRR +G+IRI+ E + LS ++ Sbjct: 446 KTGDAVAMADKMDSLCGCFAVGLIPSGNRDPYALRRQGIGVIRILQEKGYSLSLSAIVDK 505 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +I F DR+ L ++ D+I+A + D++ + + Sbjct: 506 GLTLVKDKADQNLAETRDKIISFLADRMAHMLAEQGFSKDVIQAAVAISCDDIPYLWKRV 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + + E + KR+ I+ +K E++P + EK L + Sbjct: 566 AAVEKLKTLPDYEALAQTFKRVANIIKQAAEKGTLSDQEVNPALFEKDCEKDLLEAFTAM 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + + + ++ FFD V+V +D +VR+NRL+LL I + Sbjct: 626 EAKVSGLGVDE----ALLEVAKLRPAVDAFFDDVMVMAEDMKVRENRLALLAGIAGLFGR 681 Query: 695 VINVQKI 701 + +I Sbjct: 682 FADFSRI 688 >gi|300361840|ref|ZP_07058017.1| glycyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] gi|300354459|gb|EFJ70330.1| glycyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] Length = 690 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 198/731 (27%), Positives = 345/731 (47%), Gaps = 75/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF R G+ T D ++ Y+ V + Sbjct: 63 KQDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ D+L + I+ + +P MRW + F ++RP+ ++ +L +E Sbjct: 122 EGKK-ASDILMGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ D + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIADADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N + + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRNGNS-EYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L +V FH KIG+ E ++R++++G + + + ++ Sbjct: 337 ---------PLAHFVDKLK--NVSFHDKIGSVAEHMARVQIIGDYLGKKFNISETEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P ++P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLTGEDENVSVAIKESYMPTSAEGDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPVKDVLPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N + ++ +E+ L A + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---AAKVDESLFQDVSEEELNAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + S+ + + I +F+ ++ D +V++NRL+ L + N+ Sbjct: 623 NALEENTDLSIA-----DLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNNL 677 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 678 ADRMGDLSKLV 688 >gi|325141525|gb|EGC63995.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis 961-5945] gi|325199022|gb|ADY94478.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis G2136] Length = 687 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 210/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTADP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +R L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERTARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|315150154|gb|EFT94170.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0012] Length = 694 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 348/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTLSRIQLEEKVIEFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVIPFKVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|27364425|ref|NP_759953.1| glycyl-tRNA synthetase subunit beta [Vibrio vulnificus CMCP6] gi|32130159|sp|Q8DDJ7|SYGB_VIBVU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|27360544|gb|AAO09480.1| Glycyl-tRNA synthetase beta chain [Vibrio vulnificus CMCP6] Length = 693 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 208/728 (28%), Positives = 346/728 (47%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + H +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEHQADKIVEKRGPAVSAAFDADGNATKAAQGWARGCGITVDQAERMITD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTADIVVELAAKALAGLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + + GHRF ++S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIQGEILGVASDRVIRGHRFMGEREFTIESAEQYPSILEERGKVMADYEARKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+A+G + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 T + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYTEDKQLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------SKLIDRLPMLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVAVALNEQYMPRFAGDDLPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSSAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +Q +I F R + + D D+I+A+L Sbjct: 505 AKSLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ +I L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAEALAAANKRVGNILA---KFDGELAADIDLALLREDAEKVLAENV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNL 681 Query: 692 ILIVINVQ 699 L + ++ Sbjct: 682 FLQIADIS 689 >gi|320160283|ref|YP_004173507.1| glycyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319994136|dbj|BAJ62907.1| glycyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 998 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 204/723 (28%), Positives = 325/723 (44%), Gaps = 68/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+PA A E L + LL E + + ++ TP RL + ++ LSP Sbjct: 316 FLLEIGTEELPAADLQSALEQLREKVPALLDELRLSHGEVKVMGTPRRLAVLVENLSPAQ 375 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ GP G KA +GF RS GL +S ++++ G +A + + Sbjct: 376 PDRTTVVKGPPAARAFDAQGQPTKAAEGFARSRGLD-VSALKVQEIDG-GQYVVAEVFEK 433 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R DVL +P I + + K+MRW+ S ++ RP++ + +L + +I Sbjct: 434 GRSAVDVLSEALPDLIASLRFDKTMRWNA-----SQVAFSRPIRWLAALLGS-----TVI 483 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + +T G RF+ P + + Y L +LLDPE RR +I RL Sbjct: 484 PFEYAGLRADRVTRGLRFYQPETFTLNTAAEYQNVLRSQGILLDPEERRASIAEQVQRLM 543 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G D+ LL+E+ LVE +G+FD +L LP E++ +K +Q+ F Sbjct: 544 TEAGGVPKLDESLLDEVTQLVEAPTAVLGTFDPAHLKLPAEVLISVMKKHQRYFPVYAST 603 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V N + GN++V+ AR DA F + D Sbjct: 604 GELLPYFITVRNGDNQ-YLDIVADGNAQVIGARFADASFFIQED---------------- 646 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDR 413 L L++R+ RL L F K+G+ ++ R+ L K+A +D+A R Sbjct: 647 ----LKYTLEERLPRLGTL--TFQYKLGSMLDKSRRVEALVDKLAPFFGLSQSDLATARR 700 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL T +V E LQG +G+ YA E DAI EH PR + +P Sbjct: 701 AAYLLKADLVTHMVIEMTSLQGIMGRYYAEHSGEPKGVADAIFEHYLPRFAGDALPETLP 760 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ- 532 I +S+AD+LDTL +A PSG+KDP+A RRA LG++++++ +I L Q + Sbjct: 761 GILLSVADRLDTLSGLFAAGLAPSGTKDPFAQRRAALGLVQVLISRQIPFDLRQGLALAA 820 Query: 533 -------------NLILFFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + F + RL+ +L D R+D+++A++ + N + L Sbjct: 821 QGLPITASEESQNACLEFIYGRLRTHLMDDYGFRYDVVDAVMAEQAHNPFGAYRAAQALT 880 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 + A L + R +I ++++ + P+ + E+ LYA + Sbjct: 881 AWVQRADWNTILPAYARCVRI-----TRDQKEQFAVQPERFVEVEEQALYAALLQAEAAP 935 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++ + + I FFD VLV +D VR NRL LLQ I + V + Sbjct: 936 RQPGSVDDFFAAFLPMI---PVINRFFDTVLVMAEDAGVRANRLGLLQRIAALTRGVADF 992 Query: 699 QKI 701 K+ Sbjct: 993 SKL 995 >gi|103487096|ref|YP_616657.1| glycine--tRNA ligase [Sphingopyxis alaskensis RB2256] gi|98977173|gb|ABF53324.1| Glycine--tRNA ligase [Sphingopyxis alaskensis RB2256] Length = 723 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 251/754 (33%), Positives = 362/754 (48%), Gaps = 86/754 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPARMQ A +L + + G++ ++ + TP RL L + L Sbjct: 1 MTDFLLELRSEEIPARMQAGARAELEKLFRTQMSAAGIVVGDLTIWSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL D +D V+ AV+ KP R Sbjct: 61 DATAAVSEELKGPRTSAPPQALEGFLRKTGLT--QDQLEDRDG----VWFAVIDKPGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +P ++ WPKSMRW + + W+RPL I+ I E +I ++ Sbjct: 115 AEVLAEAIPAIVRAFAWPKSMRWGRDSASSESLRWVRPLSGIVAIF-----GEALIPCEV 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRFH P I + S Y L V++D R I + A + A+ G Sbjct: 170 GGISAGFATRGHRFHCPGEITIGSASDYAEKLRACHVIVDHAERARIIRDGAAKAAADAG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L LVED+ L+ E GL EW +G FD+ +L +P E+I+LT + NQK FV +G LA Sbjct: 230 LSLVEDEGLVIENAGLTEWPVPLLGRFDEAFLAVPPEVIQLTARVNQKYFVVNDADGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F+ +NI A DGGA IV GN +V+AARL DA FW++D+ Sbjct: 290 NGFVCTANIDAVDGGAEIVAGNQKVLAARLSDARFFWEQDRK------------------ 331 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVL 417 L +LD + FH K+GT ++V R+ L + +A + + D AL +A L Sbjct: 332 --TKLADHAKKLDR--ITFHEKLGTVADKVERVAKLAEWLANEGIVPNCDPALARQAAEL 387 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G YA + + DAI +H KP G ++VPT +++ V Sbjct: 388 AKADLVTEMVGEFPELQGLMGGYYARAEGLPQAVADAIRDHYKPVGQGDDVPTAPVTVAV 447 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI-- 535 +LADKLDT+ F+ N KP+GSKDP+ALRRA LGII + + + + + ++ Sbjct: 448 ALADKLDTIAGFFMKNMKPTGSKDPFALRRAGLGIIALTVRSSLRGDIGTWLAAARRYFV 507 Query: 536 ----------------------------------LFFHDRLKLYLHDRDIRHDLIEAILR 561 F DRLK+ + +RHDLI+A+ Sbjct: 508 DQDIVDEREYPDAYATKDAAISAGLATVFMDEVRDFIADRLKVQQREAGVRHDLIDAVFA 567 Query: 562 P-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 D+L+ ++ +K L F ++ G L KR IL + + Q L Sbjct: 568 LGGEDDLVRLLARVKALQAFMATEDGTNLLAGYKRAANILKQASVPAEAGTRGGAAQVLE 627 Query: 621 LEA-------------EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 + L A + ++ +R+ L S+ PI+ FF+ Sbjct: 628 EGTPGLRLSPECMTVHDAALLAALDTAEPAALNAVADERFTDAMAALASLRAPIDAFFEG 687 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN D VR RL LL + V + KI Sbjct: 688 VMVNDPDEVVRAYRLGLLARFTGAVHGVADFSKI 721 >gi|116629753|ref|YP_814925.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri ATCC 33323] gi|282851790|ref|ZP_06261153.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 224-1] gi|311110605|ref|ZP_07712002.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri MV-22] gi|122273309|sp|Q042Y5|SYGB_LACGA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116095335|gb|ABJ60487.1| glycyl-tRNA synthetase beta chain [Lactobacillus gasseri ATCC 33323] gi|282557032|gb|EFB62631.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 224-1] gi|311065759|gb|EFQ46099.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri MV-22] Length = 690 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 198/731 (27%), Positives = 344/731 (47%), Gaps = 75/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF R G+ T D ++ Y+ V + Sbjct: 63 KQDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ D+L + I+ + +P MRW + F ++RP+ ++ +L +E Sbjct: 122 EGKK-ASDILMGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ D + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIADADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N + + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRNGNS-EYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L +V FH KIG+ E ++R+ ++G + + + ++ Sbjct: 337 ---------PLAHFVDKLK--NVSFHDKIGSVAEHMARVHIIGDYLGKKFNISETEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P ++P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLTGEDENVSVAIKESYMPTSAEGDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPVKDVLPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N + ++ +E+ L A + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---AAKVDESLFQDVSEEELNAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + S+ + + I +F+ ++ D +V++NRL+ L + N+ Sbjct: 623 NALEENTDLSIA-----DLYKGFVELQPVINNYFESNMILDKDEKVKNNRLAQLLKVNNL 677 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 678 ADRMGDLSKLV 688 >gi|315144753|gb|EFT88769.1| glycyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2141] Length = 694 Score = 704 bits (1817), Expect = 0.0, Method: Composition-based stats. Identities = 203/733 (27%), Positives = 349/733 (47%), Gaps = 72/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EE+PA + + L +I L E + Y+ ++ + TP RL + + + Sbjct: 1 MAKDLLLEIGLEEMPAHVVTLSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF+R G+ T I G Y+ V Sbjct: 61 PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTED---IVFKELNGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M W+ F +IRP+ I+ +L Sbjct: 118 TKFTKGQSAKEVLTKLNDVITSLTFPVTMHWANYD-----FEYIRPIHWIVALL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I ++ ++ G + GHRF + Q + Y L+E V++ P R+ I++ A Sbjct: 168 DEVISFNVLDVTTGQTSRGHRFLGDD-VTFQHANEYEAKLKEQFVVVQPNERKQMIVDQA 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+ +L D++LLEE+ LVE+ F+GSFD+KYL +P+E++ ++K +Q+ F Sbjct: 227 NALAAEKNWQLALDEELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G+L FI V N +++GN +V+ ARLEDA F+ D+ Sbjct: 287 RNDQGLLMPHFIAVRNGDNV-HLENVIKGNEKVLIARLEDAEFFYNEDKKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++ + +L +V FH KIG+ E++ R+ ++ + I + + ++ Sbjct: 337 -----------TIEACVEKLK--NVTFHEKIGSIYEKMQRVALIAQIIGRKVGLSEEELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+LQ E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQGEKPAVATAIREHYLPTSSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I ++LADKLD++ +F+++ P+GS DPYALRR T G+IRII + PL Q Sbjct: 444 ETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALRRQTYGVIRIIEDKGWTFPLVQLQ 503 Query: 530 E--------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ F RL+ L +++RHD+I+A++ E +L Sbjct: 504 TEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLLMTKNVRHDIIDAVVSAEQADLSK 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + R+ + ++ + I P +AEK LY Sbjct: 564 LFASANILKSRFEDQDFKPSMEALTRVINLAKKGQELLGDTEEGIDPSLFENKAEKELYQ 623 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++D + Y + L ++ I+ +F++ +V V+D +V+ NRL L I Sbjct: 624 AVNDLSEAFATRTIAENY----EALVNLRPLIDAYFNETMVMVEDEKVKQNRLKQLMQIA 679 Query: 690 NIILIVINVQKIV 702 + L + ++ ++ Sbjct: 680 KMALSIASLDLLI 692 >gi|37678204|ref|NP_932813.1| glycyl-tRNA synthetase subunit beta [Vibrio vulnificus YJ016] gi|61216582|sp|Q7MQI8|SYGB_VIBVY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|37196943|dbj|BAC92784.1| glycyl-tRNA synthetase, beta subunit [Vibrio vulnificus YJ016] Length = 693 Score = 704 bits (1817), Expect = 0.0, Method: Composition-based stats. Identities = 209/728 (28%), Positives = 346/728 (47%), Gaps = 68/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL+E+ +EE+P AE + LK + ++ ++ Y P RL L + L Sbjct: 1 MAKEFLIELGTEELPPTQLRTLAEAFAANFEAELKGAELTHEGVKWYAAPRRLALKVTAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + H +KI E+ GP V G KA G+ R G+ ++ D KG+ L Sbjct: 61 AEHQADKIVEKRGPAVSAAFDAEGNATKAAQGWARGCGITVDQAERMITD--KGEWLLFK 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D++ + A+ +P K MRW + +IRP+K++ ++ ++ Sbjct: 119 QEVKGQPTADIVVELAAKALAGLPIAKPMRWGNKTT-----QFIRPVKTLTMLMGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILND 231 +I ++ + + GHRF ++S + Y LEE V+ D E R+ IL D Sbjct: 171 --LIQGEILGVASDRVIRGHRFMGEREFTIESAEQYPAILEERGKVMADYEMRKAIILAD 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + A+A+G + DL+EE+ LVEW V F++++L +P E + T+K +QK F Sbjct: 229 AQKAAAAIGGIADLEDDLVEEVTSLVEWPVVLTAKFEEEFLKVPAEALVYTMKGDQKYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 T + L FI VSNI++ + +++GN +VV RL DA F+ D+ Sbjct: 289 VYTEDKQLLPNFIFVSNIESKEPR-YVIEGNEKVVRPRLADAEFFFNTDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L R+ L+ + +F ++GT ++ RI L IA+ I ADV Sbjct: 339 -----------SKLIDRLPMLE--NAIFQQQLGTIKDKTDRITELAGYIAEQIGADVEKS 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L+K DL T +V EF + QG +G YA E A+ E PR +++P+N Sbjct: 386 KRAGLLAKCDLMTSMVFEFTDTQGVMGMHYARHDGEAEEVALALNEQYMPRFAGDDLPSN 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +S V++ADKLDT++ + I + P GS DP+ALRRA+LG++RII+E ++ L + Sbjct: 446 GVSAAVAMADKLDTIVGIFGIGQAPKGS-DPFALRRASLGVLRIIVEYGYNLDLVDLVAK 504 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +Q +I F R + + D D+I+A+L Sbjct: 505 AKSLFAQQDGTSRLTNDNVEQEVIEFMLGRFRAWYQDEGFSVDIIQAVLARRPTKPADFD 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 +K ++ F E + KR+ ILA K + E++ EI L +AEK L + Sbjct: 565 QRVKAVSHFRELEAAEALAAANKRVGNILA---KFDGELAAEIDLALLQEDAEKVLAENV 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ++ + Y + L + EP++ FFD V+V DD ++ NRL+LL ++N+ Sbjct: 622 EVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNL 681 Query: 692 ILIVINVQ 699 L + ++ Sbjct: 682 FLQIADIS 689 >gi|148543972|ref|YP_001271342.1| glycyl-tRNA synthetase subunit beta [Lactobacillus reuteri DSM 20016] gi|184153367|ref|YP_001841708.1| glycyl-tRNA synthetase subunit beta [Lactobacillus reuteri JCM 1112] gi|227364885|ref|ZP_03848931.1| glycine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|325682490|ref|ZP_08162007.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri MM4-1A] gi|166980040|sp|A5VJI1|SYGB_LACRD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229470700|sp|B2G6Z6|SYGB_LACRJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|148531006|gb|ABQ83005.1| glycyl-tRNA synthetase beta chain [Lactobacillus reuteri DSM 20016] gi|183224711|dbj|BAG25228.1| glycyl-tRNA synthase beta subunit [Lactobacillus reuteri JCM 1112] gi|227070089|gb|EEI08466.1| glycine--tRNA ligase [Lactobacillus reuteri MM2-3] gi|324978329|gb|EGC15279.1| glycyl-tRNA synthetase beta subunit [Lactobacillus reuteri MM4-1A] Length = 691 Score = 704 bits (1817), Expect = 0.0, Method: Composition-based stats. Identities = 198/733 (27%), Positives = 355/733 (48%), Gaps = 75/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE+ + + +++++ TP R+ L + GL Sbjct: 1 MANTYLLEVGVEEMPAHVVTPSIKQLHERVAKYLKEQRITFDDIQEFATPRRMALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G I+ KG Y+ V Sbjct: 61 SDKQPDIDESVKGPAKKIAQDADGNWTKAAIGFTRGQGASVED---IEFKEVKGVEYVFV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +P I + +P M+W + +IRP++ ++ +L Sbjct: 118 EKHIAGKTVAEVLQGLPAVITSMTFPTLMKWGYNN-----LQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++ ++ G T GHRF HP+++ D Y L V+ D R+N I + Sbjct: 168 DEVVPFNILDVEAGRETQGHRFLG-HPVEIAKADDYEETLNNDFVIADQTKRKNLIKDQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ + ++ D+DLLEE+ LVEW F GSFD+KYL LP+ ++ ++K NQ+ F Sbjct: 227 TKIINENNWQVDWDEDLLEEVNNLVEWPTAFAGSFDEKYLALPDPVLITSMKDNQRFFCV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L + FI V N D +++GN RV+ RLEDA F++ DQ Sbjct: 287 RDGDGNLLSHFISVRNGNT-DYLDNVIKGNERVLVPRLEDAQFFYQEDQKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +D+ + RL V FH KI + +++ R+ V+ + + ++ ++A Sbjct: 337 -----------TIDEYVERLK--KVSFHDKISSMYDKMQRVAVIANVLGKQLNLSDEELA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 384 DLDRAAHIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKDDVATAIREHYMPISAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + +PL Sbjct: 444 QTKIGAVLAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADRGWHLPLLSIQ 503 Query: 530 EDQNLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DR+K H + +RHD+I+A +++ Sbjct: 504 SEIAPAFENAEINVSFDLNKNSDEVRSFFLDRIKQLFHGQKVRHDIIDAATDTRQNDIAN 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I++ I+ +++ ++ + + R+ +I +++ E L + P +E +++ Sbjct: 564 ILEAIQTIDDHKDDDNFKEDIEALTRVLRIAKKDKRPVSE--LVVDPNLFENPSEAKMHT 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +S+ Q+++ L ++ I +FD+ ++ + ++R+NRL+ L + Sbjct: 622 AVSELIKENQQTVSEN-----FAALRTLTPIISEYFDENMIMDKNEDIRNNRLAQLSILA 676 Query: 690 NIILIVINVQKIV 702 + ++ N+ ++ Sbjct: 677 HQASLIGNLDNLI 689 >gi|238854655|ref|ZP_04644985.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 269-3] gi|282932954|ref|ZP_06338351.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|313472194|ref|ZP_07812686.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 1153] gi|238832445|gb|EEQ24752.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 269-3] gi|281302989|gb|EFA95194.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|313449093|gb|EEQ68575.2| glycyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 1153] Length = 688 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 344/731 (47%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF+R G+ T D + Y+ V + Sbjct: 63 KQADIDEVKKGPAKKIALDSEGNFTKAAQGFVRGQGMTT-DDIYFEDLKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 122 AGKLATDILLG--MSDIIKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + +I G T GHRF + + + D Y L+ V+ D R+ I+N + Sbjct: 170 VVPVKILDITAGRKTMGHRFLG-DSVILANSDDYEEALKSQFVIADAAERKTMIVNQIDQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 229 LVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 QDGKLINHFISVRNGN-KEFLENVISGNEKVLVARLDDAKFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ ++ Sbjct: 337 ---------PLSHFVSRLD--KVSFHDKIGSMAEKLIRVRIIGEYLAKKFGLSDEVIKNF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT+ Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 ++ +S+ADK D +I F+A P+ S DPYALRR GI+RI+L + + + Sbjct: 446 EVGALLSVADKFDNIITFFAAGMIPTSSNDPYALRRYAYGIVRILLNENWSLAIDKALPK 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ + LF DR+K +L + ++D+I+A+L + I+ Sbjct: 506 MVELLDGKTKAKMPKTSQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQKDPSRIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S + + + S RI IL + K + + +E LY Sbjct: 566 AAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELYLAS 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + S+ + I+ +F+ ++ D V++NRL+ L I + Sbjct: 623 QNLQ-------AIDNLTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINEL 675 Query: 692 ILIVINVQKIV 702 + + K+V Sbjct: 676 ATRLGALSKLV 686 >gi|78357076|ref|YP_388525.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552273|sp|Q30ZR6|SYGB_DESDG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|78219481|gb|ABB38830.1| glycyl-tRNA synthetase beta chain [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 696 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 205/729 (28%), Positives = 332/729 (45%), Gaps = 63/729 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F++EI +EE+PAR ++++ L V + + TP RL L ++ + Sbjct: 1 MSVFVMEIGTEELPARFLSGLEQEIASRFEAALAAANVEFGTLNVQSTPRRLALTIENID 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 E E GP V G KA +GF R+ G + + D KG+ Sbjct: 61 AVQREAEEVVSGPPVRIAFDAQGRPTKAAEGFARTQGAELDELFTLTTD--KGEYLAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R ++++L + P I +P+PK M+W + F++ RPL+ +L + +E Sbjct: 119 KTGGRPVQEILSEVAPEIIAALPFPKKMKWGSGD-----FTFGRPLRWVLALFDSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 ++ + I GN T GHR H P P +V D Y + + V L RR + Sbjct: 170 -VVSFTVAGIVSGNETCGHRVHGPGPFEVSGADAYAGTVRDKCHVTLCAADRRRVTVEGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ G ++ LL+E+ GL E +G FD +L LP E++ +++++QK F Sbjct: 229 DALAAQAGGRILWKDSLLDEVQGLCEHPVPCLGDFDPSFLELPAEVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ + A + +G RV+ ARLEDA FWK D Sbjct: 289 AAADGSLMPHFLTVLNMTPQNS-ALVKKGWERVLRARLEDARFFWKAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 L+ D +A+LD +V+F A +G+ G++ R+ L + +A + D+ Sbjct: 336 --------LASDFDSWLAKLD--NVIFLAPLGSMGDKTRRLERLCRWLAAAVAPDIQEQA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL +E+V EF LQG +G YA + E+ A+ E P GP VP + Sbjct: 386 ARAGRLSKADLVSEMVYEFDSLQGIMGGIYARRKGEDEIVAQAVSEQYLPAGPESPVPDS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ADK DTL + ++ P+G+ DPYALRR LGI RI+LE + + + Sbjct: 446 LCGALLSIADKADTLAGCFGLSMIPTGAADPYALRRCALGIARIMLEKGLRFDVRELFRY 505 Query: 532 QNL------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 FF RLK + L+EA L D++ Sbjct: 506 AQEGYGERQWKLKPEQAAEKLHEFFVLRLKNLFVSQGHETLLVEAALHAGADDVWAAGAR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIE-EKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L+ F SA+ + +L+ KR I+ + ++++ + EAEK L + Sbjct: 566 LEALDRFSKSAEFGQAVLTFKRAANIIRKQGQEEDGGLDGCYDASLFEDEAEKALAGALE 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 D + YH + LL + ++ FFD V+V +D +R NRL+LLQ + + Sbjct: 626 DIAPDFEARWAADDYHALFGLLGVLRPAVDAFFDSVMVMCEDPHIRRNRLNLLQSLVQRL 685 Query: 693 LIVINVQKI 701 + + + Sbjct: 686 GRLADFGAL 694 >gi|89895829|ref|YP_519316.1| hypothetical protein DSY3083 [Desulfitobacterium hafniense Y51] gi|123397647|sp|Q24SX0|SYGB_DESHY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|89335277|dbj|BAE84872.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 690 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 205/732 (28%), Positives = 339/732 (46%), Gaps = 72/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI +EEIPA+ L +E + YQ+++ Y TP R + ++GL Sbjct: 1 MAKDFLLEIGTEEIPAKFAPGVLNQLREQAQKHCQELRLDYQDLKVYTTPRRFAVLIQGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G KA GF R G++ D +++ VY A Sbjct: 61 AEKQTDFTAEVKGPAVKAAYDAEGNPTKAAQGFARGQGVEP-KDLFVQELNGVSYVY-AR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L + I + +PK MRW+ F + RP++ I+ + +E Sbjct: 119 KFELGQPTLQLLPKLCTDLITGLHFPKPMRWADLE-----FRFARPIRWIVALFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + G + GHR P+ + S Y + + +A V++DPE RR ++ Sbjct: 171 --VIPFEFVGLASGKASRGHRTLG-GPVTLDSPADYEKQMLQAFVMVDPEQRRQSVWEQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H LA+ VG ++ +D DLL+E+ ++E+ +G Y+ LPE +I +K +Q+ F Sbjct: 228 HALAAKVGGDVEKDDDLLDEVTHIIEYPTALLGEVAPNYMHLPEPVITTPMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +EG L FI V N A + GN +V+ ARLEDA +++ DQ Sbjct: 288 RDKEGKLLPYFITVRNGD-DHALAKVKAGNEKVLKARLEDAAFYYREDQK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 PL + + +LD V +H K+G+ +RV RIR L + IA + + Sbjct: 337 ----------TPLAELVEKLD--KVTYHEKLGSVRQRVERIRTLARGIAARLGMESKKQD 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV+R +L+KADL T +V +FPELQG +G +YA + E C I EH +PR + +P Sbjct: 385 LVERTALLAKADLVTLMVYDFPELQGIMGADYARMVGEKPEVCTGILEHYQPRFAGDELP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VS+ADKLD ++ + I +P+GS+DPYALRR G++ IILE DI L Q I Sbjct: 445 QSYTGQIVSVADKLDAIVGAFGIGIQPTGSQDPYALRRQAQGVVGIILEAGWDISLEQLI 504 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L FF RL+ L ++ R+D ++A+L ++ + Sbjct: 505 AASYVNFAEQGISLLPLADLQSALQDFFQQRLRFVLQEQGARYDTLDAVLAQGSNQITRA 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + + R + + + + P+ L+ E L A Sbjct: 565 ARKAQVLAAKRETTEFVPYSQAYIRCLNLSKKAQ------TQPLDPKNLIDPTEIALAAA 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++ Y + L + IE F+ V++ V+D ++ RL+LL Sbjct: 619 LVQRQEAFAALIEKGDYAEAYALASELIPMIEALFNAVMIMVEDEILKQARLALLGECVA 678 Query: 691 IILIVINVQKIV 702 I+ + ++ + Sbjct: 679 ILGCLGDLSLLA 690 >gi|238853402|ref|ZP_04643781.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 202-4] gi|238833974|gb|EEQ26232.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 202-4] Length = 690 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 198/731 (27%), Positives = 344/731 (47%), Gaps = 75/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LKE G+ +++++ Y TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTKKYLKENGLSFKDIKTYSTPRRLTILVEDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF R G+ T D ++ Y+ V + Sbjct: 63 KQDDIDEVKKGPAKKIAQDKDGNWTKAAQGFARGQGMTT-DDIYFEELKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ D+L + I+ + +P MRW + F ++RP+ ++ +L +E Sbjct: 122 EGKK-ASDILMGM-SDIIKAMTFPTKMRWDSND-----FEFVRPIHWMVSLLGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G T GHRF + + + D Y L+ V+ D + R+ ILN Sbjct: 170 VVPVKLLDVVAGRKTQGHRFLG-DSVVLANADDYEEALKSQYVIADADERKGMILNQIQE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ DK LLEE+ LVE+ VF GSFD+KYL +P+E++ ++K NQ+ F Sbjct: 229 LVAQHNWKVNIDKGLLEEVTNLVEYPTVFAGSFDEKYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N FI V N + + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 ENGKLINHFIAVRNGNS-EYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 PL + +L +V FH KIG+ E ++R+ ++G + + + ++ Sbjct: 337 ---------PLAHFVDKLK--NVSFHDKIGSVAEHMARVHIIGDYLGKKFNISETEMKDF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DR + K DL T +V EF ELQG +G YA L E+ + AI+E P ++P+ Sbjct: 386 DRVSDIYKFDLVTSMVGEFAELQGVMGMHYARLTGEDENVSVAIKESYMPTSAEGDLPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 + +S+ADKLDT+I+F+ PS S DPYALRR GI+RI+L +P+ Sbjct: 446 TVGSLLSIADKLDTIISFFGAGMIPSSSNDPYALRRNAYGIVRILLNEGWSLPVKDVLPE 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + F DR+K L +D+I+A+L + + I+ Sbjct: 506 LIQLLSGKTAAKLPKDAEAENEIADFIRDRVKQQLQVEKYDYDVIDAVLASSQQDPIQIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L A + + S RI IL + +N + ++ +E+ L A + Sbjct: 566 AAAKTLQMHHDDADFKPVVESLTRITNILKKAKYRN---AAKVDESLFQDVSEEELNAGV 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + S+ + + I +F+ ++ D +V++NRL+ L + N+ Sbjct: 623 NALEENTDLSIA-----DLYKGFVELQPVINHYFESNMILDKDEKVKNNRLAQLLKVNNL 677 Query: 692 ILIVINVQKIV 702 + ++ K+V Sbjct: 678 ADRMGDLSKLV 688 >gi|227529169|ref|ZP_03959218.1| glycine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] gi|227350894|gb|EEJ41185.1| glycine--tRNA ligase [Lactobacillus vaginalis ATCC 49540] Length = 691 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 204/734 (27%), Positives = 356/734 (48%), Gaps = 77/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE+ + + ++++ TP RL L + GL Sbjct: 1 MANSYLLEVGVEEMPAHVVTPSIKQLHERVANYLKEQRISFDEIQEFATPRRLALLIHGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G I+ KG Y+ V Sbjct: 61 SDKQPDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGASVDD---IEFKEVKGVEYVFV 117 Query: 113 LRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + +VL+ +P I + +P M+W + +IRP++ ++ +L Sbjct: 118 EKHISGKPVAEVLQG-LPDVITSMNFPTLMKWGYNN-----LQFIRPIRWLVSLL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + ++ G IT GHRF H ++++ Y + L + V+ D R+ I Sbjct: 167 NDQVVPFKILDVEAGRITRGHRFLG-HEVELKQATDYEKSLHDDFVIGDQTKRKQLIEKQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ++ SA + D DLLEE+ LVEW F GSFDKKYL LP ++ ++K NQ+ F Sbjct: 226 IDKIVSANDWVIDTDPDLLEEVNNLVEWPTAFAGSFDKKYLVLPNAVLITSMKDNQRFFY 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R EG L+ FI V N D +++GN RV+ RLEDA F++ DQ Sbjct: 286 LRDHEGNLSPNFIAVRNGNT-DYLENVIKGNERVLVPRLEDAKFFYEEDQKI-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 +D+ + RL V FH KI + +++ R+ ++ + + ++ ++ Sbjct: 337 ------------SIDEYVERLKR--VSFHDKISSMYDKMQRVAIIAAVLGKRLNFSDEEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A +DRA + K DL T++V EF ELQG +G+ YA L E + AI EH P ++ Sbjct: 383 ADLDRAAHIYKFDLTTQMVGEFAELQGVMGEIYAKLFGEKPAVAQAIREHYMPVSAEGDL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P +KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII ++ +PL Sbjct: 443 PESKIGAALAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADSNWHLPLLNI 502 Query: 529 I--------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + FF DR+ L + ++HD+I+A+ ++ ++ Sbjct: 503 QPEIVKAFDEAGLDVDIDISKNAAQVRSFFMDRIHQLLSGQHMKHDVIDAVTDTQSADIE 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 ++D + + + + R+ +I +K N + S+++ P +E++LY Sbjct: 563 NVLDAANAIKAHHDDENFKGVVEALTRVLRI---AKKGNNDSSVKVDPSLFQNPSEQKLY 619 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++D + + L S+ I +FD+ ++ D V++NRL+ L + Sbjct: 620 DAVNDLVDKSSQRTVEDNFA----ALRSLAPIISEYFDENMIMDKDENVKNNRLTQLGIL 675 Query: 689 KNIILIVINVQKIV 702 ++ N+ K++ Sbjct: 676 ARQTYLIGNLDKLI 689 >gi|194467795|ref|ZP_03073781.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus reuteri 100-23] gi|194452648|gb|EDX41546.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus reuteri 100-23] Length = 691 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 200/734 (27%), Positives = 356/734 (48%), Gaps = 77/734 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + +LLE+ EE+PA + + + L + LKE+ + + +++++ TP R+ L + GL Sbjct: 1 MANTYLLEVGVEEMPAHVVTPSIKQLHARVEKYLKEQRITFDDIQEFATPRRMALLIHGL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S P+ E GP G KA GF R G I+ KG Y+ V Sbjct: 61 SDKQPDIDESVKGPARKIAQNADGNWTKAAIGFTRGQGASVED---IEFKEVKGVEYVFV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +P I + +P M+W + +IRP++ ++ +L Sbjct: 118 EKHIAGKTVAEVLQGLPAVITSMTFPTLMKWGYNN-----LQFIRPIRWLVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ ++ ++ G T GHRF HP+++ D Y L V+ D R+N I + Sbjct: 168 DEVVPFNILDVEAGRETQGHRFLG-HPVEIAKADDYEETLNNDFVIADQTKRKNLIKDQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ + ++ D+DLLEE+ LVEW F GSFD+KYL LP+ ++ ++K NQ+ F Sbjct: 227 TKIINENNWQVDWDEDLLEEVNNLVEWPTAFAGSFDEKYLALPDPVLITSMKDNQRFFCV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L + FI V N D +++GN RV+ RLEDA F++ DQ Sbjct: 287 RDEDGNLLSHFISVRNGNT-DYLDNVIKGNERVLVPRLEDAQFFYQEDQKL--------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +D+ + RL V FH KI + +++ R+ V+ + + ++ ++A Sbjct: 337 -----------TIDEYVERLK--KVSFHDKISSMYDKMQRVAVIANVLGKQLNLSDEELA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA + K DL T++V EF ELQG +G+ YA L E AI EH P +P Sbjct: 384 DLDRAAHIYKFDLTTQMVGEFAELQGIMGEIYAKLFGEKDDVATAIREHYMPISAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 KI +++ADKLD++++F+A++ PSGS DPYALRR GI+RII + +PL Sbjct: 444 QTKIGAVLAIADKLDSIMSFFAVDMIPSGSNDPYALRRQAFGIVRIIADRGWHLPLLNIQ 503 Query: 530 --------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF DR+K H + +RHD+I+A +++ Sbjct: 504 SEIIPAFETAEINVSFDLNKNSDEVRSFFLDRIKQLFHGQKVRHDIIDAATDTRQNDIAN 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS-LEISPQYLLLEAEKRLY 628 ++ I+ +++ ++ + + R+ +I +K NR +S L + P +E +++ Sbjct: 564 VLAAIQTIDDHKDDDSFKEDIEALTRVLRI---AKKDNRPVSELAVDPNLFENPSEAKMH 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 +S+ Q+++ L ++ I +FD+ ++ + ++R+NRL+ L + Sbjct: 621 TAVSELIKEDQQTVSEN-----FAALRTLTPIISEYFDENMIMDKNEDIRNNRLAQLSIL 675 Query: 689 KNIILIVINVQKIV 702 + ++ N+ ++ Sbjct: 676 AHQASLIGNLDNLI 689 >gi|117918475|ref|YP_867667.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. ANA-3] gi|166227928|sp|A0KR42|SYGB_SHESA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|117610807|gb|ABK46261.1| glycyl-tRNA synthetase, beta subunit [Shewanella sp. ANA-3] Length = 688 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 215/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLAINVTELALA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVDQAERLVTD--KGEWLVYNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNVRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDDLLEEVTSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 292 DAGKLLPNFIFVANIESKDP-AQIIAGNEKVVRPRLADAEFFFNTDKKH----------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 340 ---------TLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIEVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K E+ I+ L AE+ L A +++ + Sbjct: 569 FRSLEASSALAAANKRVSNILA---KVEGELPTTINSALLAEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 626 PLFANADYQQALTLLASLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 685 >gi|312872904|ref|ZP_07732964.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2062A-h1] gi|311091426|gb|EFQ49810.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2062A-h1] Length = 689 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 353/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I+F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIISFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIDLLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|229916324|ref|YP_002884970.1| glycyl-tRNA synthetase, subunit beta [Exiguobacterium sp. AT1b] gi|229467753|gb|ACQ69525.1| glycyl-tRNA synthetase, beta subunit [Exiguobacterium sp. AT1b] Length = 684 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 205/715 (28%), Positives = 343/715 (47%), Gaps = 71/715 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ ++ + L+ + LKE V + ++ Y TP RL + ++ ++ + E GP Sbjct: 14 PAQYVLRSEKQLAERVDAFLKEARVDFGSIEVYSTPRRLAVIVRDVAETQQDLTETLRGP 73 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF R GL T+ D ++ KG Y+ R K L Sbjct: 74 AKKIAQDAEGNWSKAAQGFARGRGL-TVEDLYFAEE--KGVEYVFAERHEKGKETVSLLN 130 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I+ + +PK+M+W T S+ ++RP++ ++ + + IID ++ + Sbjct: 131 GLEDVIRSLTFPKNMKWGT-----SSLRYMRPIRWLIALFGQD-----IIDFTIEGVNTN 180 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 N+T GHRF + + + S Y++ LE A V+ + E R+ I LA+ G + D Sbjct: 181 NVTRGHRFLSKGDVVISSPAEYVQTLESAFVMANYEMRKAEIERQIQELATKQGWTIPLD 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLLEE+ LVEW G FD+ YL LPEE++ T+K +Q+ F +G L N F+ V Sbjct: 241 ADLLEEVTNLVEWPTALFGEFDEAYLDLPEEVLITTMKEHQRYFPVY-LDGTLKNYFVTV 299 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + + +GN +V+ ARL DA+ F++ D+ +D Sbjct: 300 RNGNA-EHLENVARGNEKVIRARLADAVFFYEEDKK--------------------TKID 338 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEI 426 ++ RLD +VFH K+GT G + R+ + K++A L +AD+ V RA + K DL +++ Sbjct: 339 DQLGRLDR--IVFHEKLGTTGAKARRVTKIAKELAALFEADLEKVSRAGAIHKFDLVSQM 396 Query: 427 VREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 V EF ELQG +G++YA+ Q E+ AI EH PR + P ++LADKLD++ Sbjct: 397 VYEFTELQGIMGEKYALQQGEDKEVAAAIREHYMPRFAGDASPETATGAVLALADKLDSI 456 Query: 487 INFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI----------- 535 F+ I PSGS+DP+ALRR G+++I+ + KID+ + + + Sbjct: 457 AAFFGIGMIPSGSQDPFALRRQAQGVVQILGDWKIDLSIDTLLSKVVELQLEAGLYEADK 516 Query: 536 --------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 FF RLK L ++ +R+D+I+A+L ++ + + EF S+ + Sbjct: 517 EQVKAQLDDFFKLRLKYRLQEQQVRYDVIDAVLTTSLT-VVRLDARADAIQEFVST-DAK 574 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + R+ I E + ++ P + E L+ I ++++ Y Sbjct: 575 ALIEQLSRVVNISKKGE------AGDVDPSLFENDHEIALHDAIEQTAPATADAVEMGDY 628 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + DLL + PI ++F+ +V DD VR NRL + + I V + +V Sbjct: 629 KKALDLLQQLESPIMMYFEHTMVMSDDEAVRQNRLHEMNRLATTIKRVADFNALV 683 >gi|304320092|ref|YP_003853735.1| glycyl-tRNA synthetase subunit beta [Parvularcula bermudensis HTCC2503] gi|303298995|gb|ADM08594.1| glycyl-tRNA synthetase beta subunit [Parvularcula bermudensis HTCC2503] Length = 688 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 268/717 (37%), Positives = 389/717 (54%), Gaps = 47/717 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D LLE++SEEIPAR+Q + A DL ++ LL E + + + T RL L + GL Sbjct: 1 MSDLLLELFSEEIPARLQQRGAADLQRLVTDLLSAEALAFDEAVAFATARRLTLRVTGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EER GPRVGA KAI+GF+++ GL +I + +K+D KG Y+AV+ + R Sbjct: 61 DAQADRREERKGPRVGAPDKAIEGFMKAAGLASIDEAIVKED-GKGAFYVAVIDQRGRRT 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L +P ++ PWPKSMRW + + W+RPL SILC E ++ L Sbjct: 120 ADLLAERLPQLLKTFPWPKSMRWGESE---NELRWVRPLHSILCTFGGE-----VVPFTL 171 Query: 181 KE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + I G T GHRF AP + + + Y L V+LD R I +A LA Sbjct: 172 ENGERPITSGACTAGHRFEAPETFEATTFEDYCETLLARKVILDGARREEKIWAEATALA 231 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-R 295 SA GLE++ D LL E+ GL EW MG FD+K+L +P+E + ++ +QK F R + Sbjct: 232 SAAGLEVIADPGLLAEVSGLAEWPVARMGRFDEKFLAVPDEALIAAMRGHQKYFSVRDPK 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G LA FI V+NI +DGG A+++G RV+AARL DA + +D Sbjct: 292 TGRLAPHFICVANIDPADGGQAMMEGYERVLAARLSDAWFLYHQD--------------- 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L PL Q RL DV + +GT E+V R L +++A + A A A Sbjct: 337 -----LKTPLAQHAERLK--DVTYFDGLGTTWEKVGRTADLAERLALALGAAPAAARGAA 389 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQ---NENISCCDAIEEHLKPRGPLENVPTNK 472 +L KADL TE+V EFPELQG + + Y + + + + +A+ +H KP G + VPT Sbjct: 390 LLCKADLPTEMVGEFPELQGIMARYYYLAETGTAADPAIAEALRDHYKPAGQGDLVPTAP 449 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-------PL 525 +S+TV+LADKL TL FW+I EKP+GSKDP+ALRR LG+I+++LEN + PL Sbjct: 450 LSVTVALADKLTTLAMFWSIGEKPTGSKDPFALRRMALGVIQLVLENGARLSLRDSVAPL 509 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 +L+ FFHDRL++YL ++ R+D IEA+L P++D+L IV + ++ F ++ + Sbjct: 510 LDTKAQADLLGFFHDRLRVYLKEKGHRYDHIEAVLTPDSDDLGLIVTRLHAIDRFLATPE 569 Query: 586 GEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 G + + KR IL EEKK EI L E+ LY + + ++ Sbjct: 570 GGDLVAAYKRAANILKAEEKKEGGPFGGEIDTAQLEAAEEQALYTALEGVEAALAAALPK 629 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ EP++ FF +V VNV+ E+R NRLSLL + V + K+ Sbjct: 630 DDITAALAALSSLREPLDRFFTEVTVNVEAPELRKNRLSLLHRLALAFGDVADFAKL 686 >gi|312871720|ref|ZP_07731808.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 3008A-a] gi|311092662|gb|EFQ51018.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 3008A-a] Length = 689 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 205/731 (28%), Positives = 352/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S R+ IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRVANIL---KKADFSEAGQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|219670261|ref|YP_002460696.1| glycyl-tRNA synthetase subunit beta [Desulfitobacterium hafniense DCB-2] gi|254781846|sp|B8FUJ0|SYGB_DESHD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219540521|gb|ACL22260.1| glycyl-tRNA synthetase, beta subunit [Desulfitobacterium hafniense DCB-2] Length = 690 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 205/732 (28%), Positives = 339/732 (46%), Gaps = 72/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI +EEIPA+ L +E + YQ+++ Y TP R + ++GL Sbjct: 1 MAKDFLLEIGTEEIPAKFAPGVLNQLREQAQKYCQELRLDYQDLKVYTTPRRFAVLIQGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G KA GF R G++ D +++ VY A Sbjct: 61 AEKQTDFTAEVKGPAVKAAYDAEGNPTKAAQGFARGQGVEP-KDLFVQELNGVSYVY-AR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L + I + +PK MRW+ F + RP++ I+ + +E Sbjct: 119 KFELGQPTLQLLPKLCTDLITGLHFPKPMRWADLE-----FRFARPIRWIVALFGSE--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +I + + G + GHR P+ + S Y + + +A V++DPE RR ++ Sbjct: 171 --VIPFEFVGLASGKASRGHRTLG-GPVTLDSPADYEKQMLQAFVMVDPEQRRQSVWEQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H LA+ VG ++ +D DLL+E+ ++E+ +G Y+ LPE +I +K +Q+ F Sbjct: 228 HALAAKVGGDVEKDDDLLDEVTHIIEYPTALLGEVAPNYMHLPEPVITTPMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +EG L FI V N A + GN +V+ ARLEDA +++ DQ Sbjct: 288 RDKEGKLLPYFITVRNGD-DYALAKVKAGNEKVLKARLEDAAFYYREDQK---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--- 409 PL + + +LD V +H K+G+ +RV RIR L + IA + + Sbjct: 337 ----------TPLAELVEKLD--KVTYHEKLGSVRQRVERIRTLARGIAARLGMESEKQD 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV+R +L+KADL T +V +FPELQG +G +YA + E C I EH +PR + +P Sbjct: 385 LVERTALLAKADLVTLMVYDFPELQGIMGADYARMVGEKPEVCTGILEHYQPRFAGDELP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VS+ADKLD ++ + I +P+GS+DPYALRR G++ IILE DI L Q I Sbjct: 445 QSYTGQIVSVADKLDAIVGAFGIGIQPTGSQDPYALRRQAQGVVGIILEAGWDISLEQLI 504 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 L FF RL+ L ++ R+D ++A+L ++ + Sbjct: 505 AASYVNFAEQGISLLPLADLQSALQDFFQQRLRFVLQEQGARYDTLDAVLAQGSNQITRA 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L + + + + R + + + + P+ L+ E L A Sbjct: 565 ARKAQVLAAKRETTEFVPYSQAYIRCLNLSKKAQ------TQPLDPKNLIDPTEIALAAA 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++ Y + L + IE F+ V++ V+D ++ RL+LL Sbjct: 619 LVQRQEAFAALIEKGDYAEAYALASELIPMIEALFNAVMIMVEDEILKQARLALLGECVA 678 Query: 691 IILIVINVQKIV 702 I+ + ++ + Sbjct: 679 ILGCLGDLSLLA 690 >gi|262196558|ref|YP_003267767.1| glycyl-tRNA synthetase subunit beta [Haliangium ochraceum DSM 14365] gi|262079905|gb|ACY15874.1| glycyl-tRNA synthetase, beta subunit [Haliangium ochraceum DSM 14365] Length = 705 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 209/737 (28%), Positives = 338/737 (45%), Gaps = 71/737 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D LLEI +EEIPA + E LS L + + + ++ TP R+ L + ++ Sbjct: 3 ADLLLEIGTEEIPAALLTGVIETLSRRAEDALADARLGHGSVTVLGTPRRIVLSVAEVAG 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +GP G KA GF + G++ + + + + KKG+ + Sbjct: 63 QQRDLSERVVGPPARVAFDADGRPTKAAAGFAKKNGVELDALERSEVEGKKGEYVVCTRH 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R +VL ++ I +PWPKSMRW + ++RP+ ++ +L E+ Sbjct: 123 EAGRPAAEVLPGLLEALIAALPWPKSMRWGFGETA-----FVRPVHWLVALL-----GEQ 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSL-DHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ L I GN + GHRF AP V S Y+ + E V+ DP RR I + Sbjct: 173 VLPLQFAGIRAGNSSRGHRFLAPAAAPVPSSLPGYLEVMRERFVIADPALRREMIAAELS 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R+ +G + D++LL E+ LVE+ GSF++ +L +P+E+I ++ +Q+ F Sbjct: 233 RVEGEIGARVRPDEELLAEVANLVEYPMAVCGSFNEGFLEVPQEVIVSAMRAHQRYFAIE 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N F+ ++ D + GN RV+AARL DA F++ D+ Sbjct: 293 DASGALVNRFVTIAGTVTRDA-DVVRAGNERVLAARLSDAQFFFREDRK----------- 340 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 LD +LD DVVF AK+G+ G +V RI + +A + AD V R Sbjct: 341 ---------GTLDDLAQKLD--DVVFQAKLGSIGAKVRRIGAIATALAAQVGADETAVAR 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL + +V EFP+LQG +G+ YA L E+ + AI EH PRG + +P + Sbjct: 390 AAELCKADLVSHMVYEFPDLQGVMGQHYARLAGESDAVASAIYEHYLPRGAGDELPATDV 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----- 528 + +AD++DTL+ +A+ PSGS DPY LRRA LGI+ ++LE + LS+ Sbjct: 450 GAVLGIADRIDTLLGCFAVGLSPSGSADPYGLRRAALGILTLLLERGWSLSLSRLVDEAA 509 Query: 529 -----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ F RLK L + D +EA L D++ + + Sbjct: 510 AALAGTVEVSAAHKEEVLSFLRTRLKGLLSA--LPADCVEAALSAGFDDVPDARARAQAV 567 Query: 578 NEFFSSAKGEKFLLSAKRIFQILA------------IEEKKNREISLEISPQYLLLEAEK 625 E ++ KR+ +L + + P + +AEK Sbjct: 568 AALRQREDFEPLGVAFKRVANLLKSAADKAGAGAAGADAAADAAADAAPDPDLMSDDAEK 627 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 L++ + E ++ Y +L + P++ FFD+VLV +D VR NRL+LL Sbjct: 628 ALWSAYGEIERQAAEPLERGDYEAALAVLAELKSPVDRFFDEVLVMAEDPRVRQNRLALL 687 Query: 686 QYIKNIILIVINVQKIV 702 I + + + + Sbjct: 688 SRIGGGFARIADFRLLA 704 >gi|312875593|ref|ZP_07735594.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2053A-b] gi|311088847|gb|EFQ47290.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2053A-b] Length = 689 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 205/731 (28%), Positives = 351/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKEIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++ +G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKPIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S R+ IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRVANIL---KKADFSEAGQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|113968354|ref|YP_732147.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. MR-4] gi|122944262|sp|Q0HPC7|SYGB_SHESM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|113883038|gb|ABI37090.1| glycyl-tRNA synthetase, beta subunit [Shewanella sp. MR-4] Length = 688 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 215/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLAINVTELAIA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVDQAERLVTD--KGEWLVYNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNVRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDDLLEEVTSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 292 EAGKLLPNFIFVANIESKDP-AQIIAGNEKVVRPRLADAEFFFNTDKKH----------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 340 ---------TLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIDVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K E+ I+ L AE+ L A +++ + Sbjct: 569 FRSLEASSALAAANKRVSNILA---KVEGELPTAINSALLAEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 626 PLFANADYQQALTLLSSLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 685 >gi|309806591|ref|ZP_07700588.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 03V1-b] gi|308167011|gb|EFO69193.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 03V1-b] Length = 689 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 353/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I+F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIISFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANIL---KKASFSEAEQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|114045521|ref|YP_736071.1| glycyl-tRNA synthetase subunit beta [Shewanella sp. MR-7] gi|122945101|sp|Q0I0U1|SYGB_SHESR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|113886963|gb|ABI41014.1| glycyl-tRNA synthetase, beta subunit [Shewanella sp. MR-7] Length = 688 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 215/720 (29%), Positives = 346/720 (48%), Gaps = 62/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + K AE L + + +++ Y P RL + + L+ Sbjct: 5 NLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAAWYAAPRRLAINVTELAIA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +KI E+ GP V G KA +G+ R G+ ++ D KG+ + + Sbjct: 65 QADKIVEKRGPAVSSAFDAEGKPTKAAEGWARGNGITVDQAERLVTD--KGEWLVYNAKV 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + A+ K+P PK MRW ++ + +IRP+ + +L +E + Sbjct: 123 EGVETKSLIAAMAQRALDKLPIPKPMRWGSSKT-----QFIRPVHTATMLLGSE-----L 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ +L I GHRF ++ D+Y+ L E+ V+ D E R+ I DA + Sbjct: 173 IEGELLGIKSARNVRGHRFMGTG-FELDHADNYLTLLKEKGKVIADYESRKALIKADAEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G + DLLEE+ LVEW V SF++K+L +P E + T+K +QK F Sbjct: 232 AAAKIGGTADIEDDLLEEVTSLVEWPVVLTASFEEKFLNVPSEALVYTMKGDQKYFPVFD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI V+NI++ D A I+ GN +VV RL DA F+ D+ + Sbjct: 292 EAGKLLPNFIFVANIESKDP-AQIIAGNEKVVRPRLADAEFFFNTDKKH----------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L+ R+ L+ V+F ++GT ++V+RI L IA+ A+ RA Sbjct: 340 ---------TLESRLPSLET--VLFQQQLGTLKDKVTRISALAAFIAEQTGANAVDAARA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA L E + A+EE KP+ + VPT +S Sbjct: 389 GLLSKTDLMTNMVMEFTDTQGTMGMHYARLDGETEAVALAMEEQYKPKFSGDTVPTAAVS 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V+LADKLDTL+ + I + P G+ DP+ALRRA +G++RII+ENK+ + L I Sbjct: 449 CAVALADKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRIIVENKLPLDLVTLIAKAQE 508 Query: 535 IL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F R + + D+ I D+I A+L I ++ Sbjct: 509 LHGTNLSNANASDEVLEFLMARFRAWYQDKGIDVDVILAVLARRPTRPADFDSRINAVSH 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F S + KR+ ILA K E+ I+ L AE+ L A +++ + Sbjct: 569 FRSLEASSALAAANKRVSNILA---KVEGELPTAINSALLAEAAEQALAAKLAELQPQLA 625 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + Y Q LL S+ E ++ FF+ V+V DD +++NRL+LL ++ L V ++ Sbjct: 626 PLFANADYQQALTLLSSLRESVDQFFEDVMVMADDEALKNNRLALLNNLREQFLHVADIS 685 >gi|16331421|ref|NP_442149.1| glycyl-tRNA synthetase subunit beta [Synechocystis sp. PCC 6803] gi|2500995|sp|Q55690|SYGB_SYNY3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|1001591|dbj|BAA10219.1| glycyl-tRNA synthetase beta chain [Synechocystis sp. PCC 6803] Length = 722 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 200/754 (26%), Positives = 345/754 (45%), Gaps = 87/754 (11%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 MP FL EI +EE+PA A ++ L E + +++ Y TP RL + +KG Sbjct: 1 MPLQTFLFEIGTEELPADFVRSAITQWQGLIPPGLAAEFLQPESVEIYGTPRRLAVLIKG 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P+++EE GP G A GF + G+ D +I+ P KGD Sbjct: 61 LPECQPDRLEEIKGPPASAAFKDGQPTPAALGFAKKQGVNP-EDFEIRSTP-KGDFIFVN 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + D+L + ++ + + MRW + + RP++ ++C+L Sbjct: 119 KQLQGQASRDLLPKLALSWLKALDGRRFMRWGDGD-----WRFPRPIRWLVCLL-----D 168 Query: 173 EKIIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++++ L + + ++ GHR P + ++ +Y+ L+ A V++DP+ RR I Sbjct: 169 DQVLPLQIDNGSTTLVGDRLSRGHRILHPADVSLEHGQNYLAQLKTAGVVVDPQERRAMI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A+ + E + +DLL+E+ LVE+ +G FD+++L LP E+ + T+Q+ Sbjct: 229 EQQITTQAATLEGEAIIYEDLLDEVEQLVEYPTAVLGKFDQEFLSLPREVTTTVMVTHQR 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F ++G L FI ++N S G I GN RV+ ARL DA F++ D ++ Sbjct: 289 YFPVVDKDGRLLPHFITIANGDPS-KGDIIAAGNGRVIRARLADAKFFYQADCDD----- 342 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 LD + +L+ V F ++GT ++V RI + IA + Sbjct: 343 ---------------SLDSYLPQLET--VTFQEELGTMRDKVDRIMEMAAAIADQLGVTE 385 Query: 409 AL---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +D +L KADL T++V EFPELQG +G++YA++ E+ + I EH PR Sbjct: 386 QQRGEIDSTAMLCKADLVTQMVYEFPELQGIMGEKYALVSGESAAVAQGIVEHYLPRHQD 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +++P V +AD+LDTL++ + + P+GS DP+ALRRA +I + ++I L Sbjct: 446 DDLPQGLPGQVVGMADRLDTLVSIFGLGLLPTGSSDPFALRRAANAVINVAWAASLEINL 505 Query: 526 SQFIED----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEND--- 565 + + Q L FF RL+ L D + I +DL+ A+L Sbjct: 506 LELLTQGCRDFVTSHPDKTSPLQALKTFFLQRLQTLLQDEQGIDYDLVNAVLGNGETNCD 565 Query: 566 ------------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNREIS 611 +L + + ++L E + + + R ++ + + Sbjct: 566 EAQSRLHDRLLADLQDVKERAQYLQELRDNGHLDAIYPTVNRSAKLASKGTLPTDQLDPR 625 Query: 612 LEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQV 668 I L+ ++EK +Y + E + + Y + + LH + + FF D V Sbjct: 626 PVIQAPQLVQDSEKAVYQALLAIYPKAVEVQESRDYETLVNALHELAPTVAEFFDGPDSV 685 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 LV ++ E+R NRL+LL I+N LI+ + IV Sbjct: 686 LVMAENDELRQNRLNLLGLIRNYALILGDFGAIV 719 >gi|255066574|ref|ZP_05318429.1| glycyl-tRNA synthetase, beta subunit [Neisseria sicca ATCC 29256] gi|255049158|gb|EET44622.1| glycyl-tRNA synthetase, beta subunit [Neisseria sicca ATCC 29256] Length = 687 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 216/707 (30%), Positives = 353/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGAAEFTAYASPRRLAVQVKNVKSVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + ++ I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGSD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSSGEITIENADSYAAQMREQGKVVASFTERKAAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E+ L + EK LYA D I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVDESLLQQDEEKALYAAAQDLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAEQMNAVADI 682 >gi|149184489|ref|ZP_01862807.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. SD-21] gi|148831809|gb|EDL50242.1| glycyl-tRNA synthetase beta subunit [Erythrobacter sp. SD-21] Length = 736 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 250/763 (32%), Positives = 373/763 (48%), Gaps = 91/763 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SE+IPARMQ A +L + ++ GV + + TP RL L + L Sbjct: 1 MSDFLLELRSEDIPARMQTGARGELEKLFRREMEAAGVTTGEITVWSTPRRLALIARDLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP VGA +A+DGF R G+ S ++ K Y AV P R Sbjct: 61 EATEAVSEELKGPPVGAPDQALDGFCRKAGVDKGSLET--REVKGRATYFAVKNIPGRAT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +D+L +P I+ WPKSMRW + W+RPL I+ +L + +++ ++ Sbjct: 119 KDLLAKAIPAIIRDFSWPKSMRWGAASISTESLRWVRPLSGIVALL-----GDDVVECEV 173 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G +T GHRFH I + + D Y L V++D E R++ I + A ++A+ VG Sbjct: 174 HGVTSGAVTLGHRFHHSGDITIGNADDYAMKLRAGHVIVDHEERQDLIRSGAAKVATEVG 233 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L+LVED+ L+ E GL EW +G F++ +L +P E I+LT + NQK FV G LA Sbjct: 234 LKLVEDEGLVIENAGLTEWPVPLLGRFEEDFLEVPPETIQLTARVNQKYFVCENEAGELA 293 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FI +NI+A DGGA +V GN +V+AARL DA FW D+ + + Sbjct: 294 NAFICTANIEAEDGGARVVDGNRKVLAARLSDARFFWNVDRKKTLAVHAK---------- 343 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALVDRAIVL 417 + + FH K+GT ++V R+ L + + + DAD + ++A L Sbjct: 344 ------------GLERITFHEKLGTVADKVDRVAKLARWLVEEGIVKDADPDMAEQAARL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL TE+V EFPELQG +G YA + + DAI +H KP G + VPT +++ V Sbjct: 392 AKADLVTEMVGEFPELQGLMGGYYARAEGLPDAVADAIRDHYKPVGQDDEVPTAPVTVAV 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI-- 535 SLADKLDTL++F+ I E+P+GSKDP+ALRRA LG I +IL+NK+ I + Sbjct: 452 SLADKLDTLVSFFVIKERPTGSKDPFALRRAALGAIELILQNKLRIEIDYATAKAANRVF 511 Query: 536 --------------------------LFFHDRLKLYLHDRDIRHDLIEAI--LRPENDNL 567 FF DRLK+ D +RHDLI+A+ L D + Sbjct: 512 RQHENREDHDAWFTEQNNAELYRAVPDFFVDRLKVQQRDAGVRHDLIDAVFGLAERKDEI 571 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI----SLEISPQYLL--- 620 + + + L F + G L KR IL E+ E + E P L+ Sbjct: 572 VGNLARVHALQSFMDTEDGANLLAGYKRAANILKKEDWHGIEGEIARTGEEDPLALVDDP 631 Query: 621 ----------------------LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSIC 658 AE+ L ++ ++++ + + L ++ Sbjct: 632 DMRAVVEAKMAERHAKELSYAPEPAEQALMDALATSEPAAAKAIEAEDFSAAMAALAALR 691 Query: 659 EPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI+ FFD+V VN ++ R +RL LL + + V + +I Sbjct: 692 APIDRFFDEVTVNAEEENKRAHRLDLLARFRAAVHKVADFSRI 734 >gi|308271400|emb|CBX28008.1| Glycyl-tRNA synthetase beta subunit [uncultured Desulfobacterium sp.] Length = 699 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 206/728 (28%), Positives = 341/728 (46%), Gaps = 62/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLEI EEIPA A + LS IL+ L +E + + N + + TP RL + + +S Sbjct: 7 METLLLEIGMEEIPAGYIEPALKALSAILMQRLTDERIKHGNYKTFGTPRRLCICIYDVS 66 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 E +GP G A F + S K +KG A+ Sbjct: 67 AKQDSLTTEIIGPPEKIGFDGNGQLTIAGKKFAEKACISPESIN--VKQTEKGSYLCALK 124 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + VLK I+P I ++P+PK M+W+ + RP++S+ +L Sbjct: 125 TESGIESKTVLKRILPQIILQIPFPKVMKWADLD-----IKFARPIQSVAALL-----GR 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I +L I T+GHRF P IK+ D YI L++A VL D + R+N+I Sbjct: 175 QLISFELGNIKSSGNTFGHRFLCPGKIKISHPDEYIEKLKKAFVLADIDERKNSIKEHIA 234 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A+ + +++D +L++ + LVE+ GSFD+ YL +P+E++ +++ +QK F Sbjct: 235 QIAAKLDGNVLKDDELVDVVTNLVEYPVPVAGSFDRSYLEVPDEVLINSMREHQKYFAII 294 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L FI VSN QA + +V+G+ RV+ ARLEDA F+K D + P Sbjct: 295 DANKRLLPNFIAVSNTQAKNM-QVVVKGHERVLKARLEDARFFYKNDIHISP-------- 345 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 D + +L V+F AK+GT E+ R+ L + +A I D Sbjct: 346 ------------DDWVEKLK--GVLFQAKLGTMYEKTQRLEKLSQYLADEITDDAQIKKQ 391 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L KADL +++V EFP+LQG +G+ YA E+ + A+EEH +P +P Sbjct: 392 ALRAARLCKADLVSQVVGEFPKLQGIMGRIYAANAGEDKNVSIAVEEHYRPAYSGGELPE 451 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I V++ADK+D++ ++ P+G+ DPYALRR +GII+I+L L IE Sbjct: 452 TTIGSMVAIADKIDSICGCFSAGLIPTGASDPYALRRQGIGIIQIMLAKGFSFSLRSLIE 511 Query: 531 DQNLIL-----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + F R+ L + +++ AI+ ++ + Sbjct: 512 KSLSLFEIKDAIEITGRADNVYGFLQSRISHLLTEEGYAKNVVSAIVSISVSHVPDVWKR 571 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L + + + E+ + KR+ I+ +N I+ E E L++ D Sbjct: 572 TIALEKLKAVSDFEQLATTFKRVVNIIKKSAPENAGCETNINEGLFEKECESALFSAYKD 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + E++ Y Q + S+ P++ FFD VLV +D +R+NR++LL+ I ++ Sbjct: 632 IKIRVSENLLQGAYEQSLLDIASLRTPVDAFFDGVLVMAEDENIRNNRIALLRAISDLFA 691 Query: 694 IVINVQKI 701 + + K+ Sbjct: 692 LFADFSKL 699 >gi|311031644|ref|ZP_07709734.1| glycyl-tRNA synthetase subunit beta [Bacillus sp. m3-13] Length = 693 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 205/734 (27%), Positives = 361/734 (49%), Gaps = 75/734 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL EI EE+PAR + L + L+ + Y+++ Y TP RL + ++G Sbjct: 1 MSKRDFLFEIGLEEMPARFVTDSMNQLQEKVKAWLETNQLAYEDIHAYSTPRRLAILIEG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L + E GP G KA GF R GL T+ D K+ G Y+ Sbjct: 61 LVERQEDVTLEAKGPAKKVALTADGDWSKAAQGFTRGQGL-TVEDIYFKE--INGVEYVH 117 Query: 112 VLRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 V + + +++L I VA + +PK+MRW+ ++RP+K ++ + Sbjct: 118 VKKHVEGKETKEILSGIASVA-TSLHFPKNMRWADED-----LRYVRPIKWLIALF---- 167 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 E++I +++ ++ ++ GHRF ++++ Y+ +L V+++ R+ AI Sbjct: 168 -GEEVIPVEIAKVKSDRVSTGHRFLG-GQVELKDAGSYVEELLSNYVIVNATERKEAIRK 225 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + G + D+ LLEE+ LVE+ G+F+ +YL LPEE++ ++K +Q+ F Sbjct: 226 QLSIIGEENGWNIPVDEALLEEVNNLVEYPTALFGTFESEYLTLPEEVLITSMKEHQRYF 285 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++ EG L F+ V N + + +GN +V+ ARL DA F K D+ + Sbjct: 286 PVKSDEGTLLPYFVTVRNGN-HENLDNVARGNEKVLRARLSDAAFFSKEDEKLV------ 338 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA- 409 +D+ + +LD +VFH +IGT G++V R++ + +A++++ D Sbjct: 339 --------------IDEAIKKLD--KIVFHEEIGTTGDKVRRVQTIATDLAKVVNVDNET 382 Query: 410 --LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V+RA + K DL + +V EFPELQG +G++YAV + E+ AI EH PR + Sbjct: 383 QKHVERAASIYKFDLVSHMVYEFPELQGIMGEKYAVAKGESPVVAKAINEHYMPRSAEDQ 442 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 ++ + +S+++K+DT++ F+AI P+GS+DPYALRR GII+ IL L Sbjct: 443 TASSDVGAILSISEKMDTIVGFFAIGVIPTGSQDPYALRRQASGIIQTILNKDWTFSLET 502 Query: 528 FIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 F+ +++++FF RLK L +R +R+D++EA+L +N+ Sbjct: 503 FMHSLVERYVEKGIAKKDTNEIMEDILVFFKLRLKNNLSERGVRYDIVEALLELPLENVC 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + V + L + A ++ + S R+ I +S E+ L E E+ LY Sbjct: 563 STVKKAETLETKKNEADFKETMESLSRVCNIAKKA-----TLSTEVQENLLNQEQEQELY 617 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + + + + + + L S+ I+ FFD ++V +D ++ NRL+L+ + Sbjct: 618 KQFNSKKDLVLRAAEDQDFSLAYEELASLKPAIDAFFDNIMVMTEDEAIKANRLALMDDM 677 Query: 689 KNIILIVINVQKIV 702 +I I NV I+ Sbjct: 678 AKVIAIFGNVNGII 691 >gi|315653575|ref|ZP_07906495.1| glycyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] gi|315488937|gb|EFU78579.1| glycyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] Length = 689 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 352/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|217964396|ref|YP_002350074.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes HCC23] gi|254781854|sp|B8DE53|SYGB_LISMH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|217333666|gb|ACK39460.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes HCC23] gi|307571039|emb|CAR84218.1| glyS [Listeria monocytogenes L99] Length = 688 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 203/732 (27%), Positives = 343/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++G+ Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVDPAD---LTFRDIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSTLLPN-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 167 GEEIIPFEITGVTTSNTSRGHRFLGKSA-TIKQPSDYPNALLEQFVVVNAEERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++ G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQAGELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 ---------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGSAELPGADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYED-----GVEVDPALFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|297539321|ref|YP_003675090.1| glycyl-tRNA synthetase subunit beta [Methylotenera sp. 301] gi|297258668|gb|ADI30513.1| glycyl-tRNA synthetase, beta subunit [Methylotenera sp. 301] Length = 706 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 215/735 (29%), Positives = 358/735 (48%), Gaps = 65/735 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG 58 M + L+E++ EE+P + +K E S +L LK +G+ + + +P RL ++ Sbjct: 3 MQNLLVELFVEELPPKALNKLGEAFSNVLFETLKSQGLAAVGTIVTAFASPRRLAVHATN 62 Query: 59 LSPHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQI-KKDPKKGDVYL 110 + +P+K ++L P G A+ L GL + + K+ K + Sbjct: 63 ILAVAPDKTSTQKLMPVSVGLDASGNPTPALIKRLNGMGLDESAVANLTKQADGKNEALF 122 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + + ++D L++ + AI K+P PK M + ++ +++RP S++ + Sbjct: 123 LDVLQKGVSLKDGLQSALNEAISKLPIPKVMTYQLADG-WTSVNFVRPAHSLVAL----- 176 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAI 228 +++ + + GN T GHRF A P+ +++ D Y L+ E V+ RR I Sbjct: 177 HGNEVVAVTALGLTAGNATQGHRFEAAVSPVVLKNADSYAEQLKTEGAVIASFAERRAEI 236 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A+ L+ +ED+ LL+E+ LVE V +G F++ YL +P+E + LT+K NQK Sbjct: 237 VRQLNAAAAKQNLKPIEDEALLDEVTALVERPNVLLGQFEEIYLEVPQECLILTMKANQK 296 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F L N F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 297 YFPLLDANDKLTNKFLIVSNISPDDA-SAVIGGNERVVRPRLADAKFFFDQDRK------ 349 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-LIDAD 407 K L+ R+ L+ VV+H K+G+QGER R+R + + I + L++ D Sbjct: 350 --------------KTLESRLEGLN--KVVYHNKLGSQGERTERVREIARDIGKALLNED 393 Query: 408 V-------ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 A LSK DL T++V EFPELQG +G+ YA + AIE+H K Sbjct: 394 AYYGDSLSGKASIAAKLSKTDLVTDMVGEFPELQGIMGRYYAQHEGLENDIAFAIEDHYK 453 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P N I + V+LADKL+TL+ ++I EKP+G KDP+ LRR LG+IRI++E K Sbjct: 454 PRFAGDALPRNPIGVVVALADKLETLVGLFSIGEKPTGDKDPFGLRRQALGVIRILIEKK 513 Query: 521 IDIPLSQFIEDQNLI-------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 +++ L++ I FF DR+ L ++ +EA+L + L Sbjct: 514 LELSLNELIRIAERPFKGLGAENYQLLKAFFSDRVANMLREQGANSQEVEAVLSLNPEIL 573 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I + + F + + + KR+ IL +K E+ E++ L AE L Sbjct: 574 SDIPQRLNAVRAFSALEEAPALAAANKRVGNIL---KKVEGEVKAEVNANLLQEAAEIAL 630 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 +S + + Y L ++ P++ FFD V+VN DD ++ NRL LL Sbjct: 631 NDALSKVKPEADKLFESGDYTASLKSLAALKAPVDAFFDNVMVNADDPALKANRLGLLAI 690 Query: 688 IKNIILIVINVQKIV 702 + + V ++ K+ Sbjct: 691 LHQTMNRVADLSKLA 705 >gi|152980513|ref|YP_001352115.1| glycyl-tRNA synthetase, beta chain [Janthinobacterium sp. Marseille] gi|229470698|sp|A6SV18|SYGB_JANMA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|151280590|gb|ABR89000.1| glycyl-tRNA synthetase, beta chain [Janthinobacterium sp. Marseille] Length = 700 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 205/716 (28%), Positives = 353/716 (49%), Gaps = 59/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + K E + L L+ +G++ + + + +P RL ++L + + +K ++ Sbjct: 16 PPKALKKIGEAFAQTLQASLQTQGLLSADSVLTAFASPRRLGVHLTKVLEQADDKTVMQK 75 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + G + +K++ K +V ++ D Sbjct: 76 LMPAAVGIGADGKATPALLKKLAALGADESAVAGLKRESDGKAEVLFFNSVVTGVMLTDG 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + +++RP ++ + A+ ++++ + + Sbjct: 136 LQKALEETLGKLPIPKVMAYQLADG-WETVNFVRPAHGLVALYGAD-----VLNISVLGL 189 Query: 184 PCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVG- 240 GN T+GHRF A P+ ++ D Y + + E V+ RR I+ A+ G Sbjct: 190 HAGNTTHGHRFEAGIDPVYIRDADSYAKQIATEGAVIASFAERRAEIVRQLASAAAEAGS 249 Query: 241 -LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 L +ED+ LL+E+ GLVE V +G F++ +L +P+E + LT+K NQK F +G L Sbjct: 250 NLTPIEDEALLDEVTGLVERPNVLIGQFEEAFLEVPQECLILTMKANQKYFPLLDSKGGL 309 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 +N F++VSNI+ +D + ++ GN RVV RL DA F+ +D+ Sbjct: 310 SNKFLIVSNIRPADA-STVIGGNERVVRPRLADAKFFFDQDRK----------------- 351 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 K L R+A LD VV+H K+GTQGER++R+R + + IA + D D A L+K Sbjct: 352 ---KTLMSRVAGLD--KVVYHNKLGTQGERIARVRAIAQAIAGKLGVDAQQADTAAQLAK 406 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL T++V EFPELQG +G+ YA+ + DAIE+H KPR + +P N + + V+L Sbjct: 407 ADLLTDMVGEFPELQGIMGRYYALHDGLPAAVADAIEDHYKPRFAGDELPRNPVGMVVAL 466 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL----- 534 ADKL+TL+ ++I + P+G KDP+ALRR LGIIR+++E K+DI ++ I Sbjct: 467 ADKLETLVGLFSIGQVPTGDKDPFALRRHALGIIRMLIEGKLDIGINDLITAAEKPFNGL 526 Query: 535 --------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + F DRL L ++ I+A+L + L + + + + F + + Sbjct: 527 SAEHRSALLNFIFDRLANALREQGYSAQEIDAVLALQPQRLADVAERLAAVRAFAALPEA 586 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KR+ IL +K ++ ++ L AE L ++ + + Sbjct: 587 ASLAAANKRVGNIL---KKVEGTVAAQVDTALLKEPAEIALNQTLTTVKPQAEAAFARGD 643 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ P++ FFD V+VN +D +R+NR LL + + V ++ K+ Sbjct: 644 YTASLQALAALRNPVDAFFDGVMVNAEDIALRNNRQGLLATLHQAMNQVADISKLA 699 >gi|259500589|ref|ZP_05743491.1| glycyl-tRNA synthetase [Lactobacillus iners DSM 13335] gi|302191280|ref|ZP_07267534.1| glycyl-tRNA synthetase subunit beta [Lactobacillus iners AB-1] gi|259167973|gb|EEW52468.1| glycyl-tRNA synthetase [Lactobacillus iners DSM 13335] Length = 689 Score = 700 bits (1808), Expect = 0.0, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 352/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGNFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW +IRP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFIRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNNWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGKKINLSSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|154251184|ref|YP_001412008.1| glycyl-tRNA synthetase subunit beta [Parvibaculum lavamentivorans DS-1] gi|154155134|gb|ABS62351.1| glycyl-tRNA synthetase, beta subunit [Parvibaculum lavamentivorans DS-1] Length = 741 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 264/760 (34%), Positives = 381/760 (50%), Gaps = 104/760 (13%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +A EDL ++ LK GV +N R + TP RL L + GL +P+ EER G Sbjct: 13 IPARMQKRAGEDLVRLVTDALKAAGVEGKNARAFATPRRLALVIDGLPDKTPDVKEERKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P+VGA ++AIDGFLR+ GL +I + +++D KKG Y+AV K R ++ IVP I Sbjct: 73 PKVGAPQQAIDGFLRAAGLASIDEATVQED-KKGAFYVAVTEKQGRDTAALIAEIVPAVI 131 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 + PWPKSMRW + + W+RPL SILC+L K+++ ++ I GN T GH Sbjct: 132 RAFPWPKSMRWGSG-----SLRWVRPLHSILCLLGG-----KVVNFEVDGIKSGNTTRGH 181 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 RF AP V Y L +A V+LDP R + I A LA A GL LVED+ LL E Sbjct: 182 RFMAPDAFVVTDFADYEMKLLDAKVVLDPAKRAHFIHAGAKALAEAEGLVLVEDEALLHE 241 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GLVEW +G D +++ +P+E++ T++ NQK F + G LA F++++N++A Sbjct: 242 VAGLVEWPVPLIGRIDDEFMSVPQEVLTSTMRANQKYFALHDKTGKLAPRFVVIANLEAE 301 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 DGG AIV GN RV+ AR DA W +D+ + L R+ +L Sbjct: 302 DGGKAIVNGNERVLRARFADARFLWDQDRKH--------------------TLTSRLPKL 341 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIVLSKADLCTEIVREFP 431 +VVFHAK+GT ++ RI L +++A + AD A L+KADL T +V EFP Sbjct: 342 Q--EVVFHAKLGTVHDKAMRIGKLARELAAFVPGADPDKAQIAGELAKADLTTGMVGEFP 399 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 ELQG +G YA + AI EH P GP + VP + V+LADK+DTL+ FWA Sbjct: 400 ELQGLMGAYYARNDGLDDEIAAAIAEHYAPLGPTDAVPLTPLGRVVALADKIDTLVGFWA 459 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL----------------- 534 I+EKP+GSKDPYALRRA LG+IR+++E +I + L Q E Sbjct: 460 IDEKPTGSKDPYALRRAALGVIRVVMEGQIRLSLVQIFETAQNELRLSTEQVSVELLNKS 519 Query: 535 ------------------ILFFHDR------LKLYLHDRDIRHDLIEAILRPENDNLLTI 570 H+R +++ R + + IE+ L + L I Sbjct: 520 DAKESDTLGLDLGAKSLGYASVHERSVRGASVRVIRSGRRVFGESIESQLLSFFADRLKI 579 Query: 571 V-----DLIKHLNEFFSSAKGEKFLLSAKRI----------------------FQILAIE 603 ++ F+ + +L KR+ IL IE Sbjct: 580 YLRDRGARHDLVDAVFALEGQDDLVLIVKRVEALSEFLATEDGKNLLAGYKRATNILRIE 639 Query: 604 EKKNREISLEISPQ--YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 E+K+ E + +P + EK L A I + ++ + + L + P+ Sbjct: 640 ERKDGEGAFNAAPDASLFAQDEEKALGAAIEAATKEAKAAVAKEDFAAAMSALAKLRAPV 699 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FF++V VN DD +R NRL LL I+ + V + K+ Sbjct: 700 DAFFEKVTVNADDAALRANRLKLLAQIRAALHEVADFSKV 739 >gi|328957484|ref|YP_004374870.1| glycine--tRNA ligase subunit beta [Carnobacterium sp. 17-4] gi|328673808|gb|AEB29854.1| glycine--tRNA ligase subunit beta [Carnobacterium sp. 17-4] Length = 694 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 203/731 (27%), Positives = 345/731 (47%), Gaps = 71/731 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LLEI EE+PA + +++ L+ + LKE + + + + TP RL + +K ++ Sbjct: 3 KNLLLEIGLEEVPAHIVTPSSKQLTQKVAAFLKENRLAHGEVIPFSTPRRLAVIVKDIAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E GP G KA GF R G T D K VY+ Sbjct: 63 KQEDIEESVKGPAKKIAQDAEGNWSKAAIGFARGQGATT-EDIYFKSIKDVEYVYVDKF- 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++D+L + I + +P SM W + +F +IRP + +L E+ Sbjct: 121 ISGKTVKDILVG-LDEVITSMTFPVSMHWGSH-----SFKYIRPFHWLTAML-----DEE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ ++ N + GHRF + S Y + LE V+ D R+ I++ Sbjct: 170 VIPFEILDVQTANTSRGHRFLGQD-VTFASALDYEKTLENVYVIADSAKRKQMIVSQIEE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L A + D+ LLEE+ L+E+ F GSFDKKYL LPEE++ ++K +Q+ F + Sbjct: 229 LMEANQWSVTFDEKLLEEVNNLIEYPTAFYGSFDKKYLDLPEEVLITSMKDHQRYFGVKD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG++ FI V N A + + +GN +V+ ARL+D F++ DQ Sbjct: 289 GEGIILPYFISVRNGNA-EHIETVAKGNEKVLTARLDDGQFFFEEDQKL----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + RL V FH KIG+ E+++R++ + + I + + ++ + Sbjct: 337 ---------TIASCVDRLK--QVTFHEKIGSIYEKMNRVQAIAQLIGKQVGLTTTELTDL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA + K DL T +V EFPELQG +G++YA++Q EN + AI EH P +P + Sbjct: 386 NRASEIYKFDLVTNMVGEFPELQGIMGEKYALMQGENPTVAAAIREHYMPISSEGELPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 + +++ADKL+++++F+A+ P+GS DPYALRR T GI+RII P+ E Sbjct: 446 SVGAVLAIADKLESVLSFFAVGMIPTGSNDPYALRRQTYGIVRIIESKNWVFPMDSLKEG 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +I F R++ L IRHD+I+A L +N+L ++ Sbjct: 506 ILAAPVINQSALIEGYQSSTAQVIDFIKARVRQLLMAESIRHDVIDAALNSRQENVLKLI 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + +N S A + + + R+ + ++ + + P +EK L+ Sbjct: 566 EASRIINGHLSDAIFKSTIEALTRVLNLADKGKELLAQEQASVDPALFETISEKNLHDSF 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + T + Q + + IE FF++ +V D+ VR+NRL+LL I + Sbjct: 626 AKIATK----SSQENSSQSYEAFEQLQPLIEAFFNENMVMADNEAVRNNRLALLMQISDF 681 Query: 692 ILIVINVQKIV 702 +L +V K+V Sbjct: 682 VLSFASVDKLV 692 >gi|257865840|ref|ZP_05645493.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257872175|ref|ZP_05651828.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257799774|gb|EEV28826.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257806339|gb|EEV35161.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 696 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 332/720 (46%), Gaps = 77/720 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L + Y + Y TP RL +Y+ G+ + EE GP Sbjct: 21 PAHVVTPSMKQLQEKTAAFLDAHALPYTTIEAYSTPRRLAVYVTGIPEKQADTQEEVKGP 80 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T I KG Y+ V + + +VLK Sbjct: 81 AKKIALDDAGNWSKAAQGFVRGQGLTTDD---ITFRELKGVEYVYVTKHTQGQPTVEVLK 137 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + I + +P +M W+ F +IRP+ I+ + E++I + +I Sbjct: 138 G-LQEVITSLTFPVTMHWADYD-----FEYIRPIHWIVALF-----GEQVIPFQILDIVT 186 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G + GHRF + D Y+ ++ V+ DP R+ I + +A + Sbjct: 187 GRESKGHRFLG-EAVTFDHADDYLEKMKHQFVIADPSERQQMITAQINAIAQENNWRIDL 245 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLLEE+ LVE+ F+G F++KYL +PEE++ ++K +Q+ F RT +G L FI Sbjct: 246 DEDLLEEVTNLVEYPTAFVGDFEEKYLSVPEEVLVTSMKEHQRYFDVRTLDGELLPHFIS 305 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 N A +++GN +V+ ARLEDA F+ D+ + Sbjct: 306 ARNGDAV-KIDNVIKGNQKVLTARLEDAEFFYNEDKKL--------------------TI 344 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 D + +L V FH KIG+ E++ R+ + + I + + ++ + RA + K DL Sbjct: 345 DHCVEKLK--QVTFHEKIGSLYEKMQRVGLAAQIIGKTVGLTQEELTDLQRAAQIYKFDL 402 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EFPELQG +G++YA++Q E + AI EH P +P +KI +++ADK Sbjct: 403 VTNMVGEFPELQGIMGEKYALIQGEKPAVAQAIREHYMPISAEGELPQSKIGAVLAIADK 462 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LD+L+ F+A++ PSGS DPYALRR T GIIRI+ E + P +Q E Sbjct: 463 LDSLLAFFAVDMVPSGSNDPYALRRQTYGIIRILAEKRWYFPFAQLQEEIREAINAQPEV 522 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + + F RL+ +L ++ RHD+IEA+L ++ T+ + + L E Sbjct: 523 FGIQLAAGQEQVTDFVKGRLRQFLLSKNTRHDVIEAVLGARQADISTLFETAQMLREHLQ 582 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + + + R+ + E I P ++E LY + Sbjct: 583 DTDFKPSMEALTRVINLAKKAELDQ----AAIDPALFENDSETALYEAVLTVEDKFPHQT 638 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + Y L ++ IE +FDQ +V V+D ++R NR +LL I + L V ++ ++ Sbjct: 639 MEENYQS----LVALRPLIEAYFDQTMVMVEDEQIRRNRFALLDKIAKMSLAVASLDALI 694 >gi|119509794|ref|ZP_01628938.1| Glycyl and Arginyl tRNA synthetase [Nodularia spumigena CCY9414] gi|119465529|gb|EAW46422.1| Glycyl and Arginyl tRNA synthetase [Nodularia spumigena CCY9414] Length = 716 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 198/744 (26%), Positives = 327/744 (43%), Gaps = 73/744 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + L + + Y TP RL + + GL Sbjct: 1 MTAFLLEVGTEELPASFLSDAILQWRSRIPQSLAANSLSSAAVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G A GF + G+ I+ +I+ KGD Sbjct: 61 SQQPDREEEIKGPPAQAAFKNGQPTPAATGFAKKQGVD-ITTLEIRPTE-KGDFVFVKKS 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L ++P I + + MRW + RP++ ++ +L + Sbjct: 119 IPGRPVAEILTELIPQWISGLEGKRLMRWGNGE-----MKFSRPIRWLVALLDDTVLPIE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ K I ITYGHR P + + Y+ L A V+++PE R N I + Sbjct: 174 LVNGS-KTITSDRITYGHRVLHPATVTISEATDYVNTLRNAFVIVEPEARANIIQREVEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A G + DLL+E+ LVE+ +G F+ ++L LP E+I + T+Q+ F Sbjct: 233 AAEKAGGSTIFYPDLLKEVTNLVEYPSAVVGKFEPEFLELPTEVITEVMVTHQRYFPVFK 292 Query: 295 R--EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI VSN + I GN RV+ ARL D F+K D Sbjct: 293 AAETKELLPNFITVSNGDPTKA-DIIAIGNERVIRARLADGKFFYKAD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---A 409 L+KPL + +L+ V F ++G+ ++V RI + I++ ++ + Sbjct: 340 --------LAKPLVSYLPQLET--VTFQEELGSVRDKVDRIVTIADYISRQLELEPNKRE 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +RA +L KADL +++V EFPELQG +G++YA+ E+ AI +H P G + +P Sbjct: 390 KTERAALLCKADLVSQMVYEFPELQGIMGEKYALASGEDAEVASAIVQHYLPTGAGDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V LAD+LDTL++ + + P+GS DP+ALRRA ++ I + I L + + Sbjct: 450 ETLTGQIVGLADRLDTLVSIFGLGLIPTGSSDPFALRRAANAVVNITWFANLPINLEKLL 509 Query: 530 ED-----------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILRPEN------- 564 L FF R++ L D I +DL+ A+L + Sbjct: 510 TQIATDFAAKYNKEQDKLIAALQEFFLQRIRTLLQDEKQIDYDLVNAVLGENDREYTERA 569 Query: 565 -DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK--NREISLEISPQYLLL 621 +LL + D +L + +K + R ++ A + E + I P+ Sbjct: 570 LQDLLDVRDRALYLQQIRKDGTLDKIYETVNRSTRLAAQGDLDFQQLEPTSLIQPELFQK 629 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVR 678 +E+ Y + + Q + + + Y + L I + FF D VLV + +++ Sbjct: 630 SSEQAFYNALLELVPQTQAAKETRNYQLLIATLEKIAPTVASFFDGEDSVLVMDPNPDIK 689 Query: 679 DNRLSLLQYIKNIILIVINVQKIV 702 NRL LL ++N ++ + IV Sbjct: 690 RNRLHLLGLLRNHARVLADFGAIV 713 >gi|319790592|ref|YP_004152225.1| glycyl-tRNA synthetase, beta subunit [Thermovibrio ammonificans HB-1] gi|317115094|gb|ADU97584.1| glycyl-tRNA synthetase, beta subunit [Thermovibrio ammonificans HB-1] Length = 689 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 213/726 (29%), Positives = 355/726 (48%), Gaps = 68/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI EE+PA E L L L+ + ++ + TP RL + Sbjct: 5 NLLLEIGCEELPAHFVTSGIEFLKEKLPQELESNFLPPSSVEVFGTPRRLIAVAYDVPEV 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++ E +GP + A +A +GF RS G+ ++ P K Y+AV R Sbjct: 65 QPDREELLVGPSLKAAFDTEGRPTRAAEGFARSKGVSVEELITVENPPGKRGTYVAVKRV 124 Query: 116 -PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R +VL+ ++P I +P+ KSMRW T + RP++ I + E Sbjct: 125 VKGRSAVEVLRELLPKLILSIPFKKSMRWGTKR-----IRFGRPIRWIAAVYGGEP---- 175 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ I NI+YGHRF +P P V+ ++ LEE V+ D E R IL+ A Sbjct: 176 -VEFEIDGIVSSNISYGHRFLSPEPFVVEEPAEHLEKLEERFVVADQEKRCAQILDGAVS 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA VG L++D++LLEE+ LVE+ +GSF++++L LP+E+ + +K +QK F Sbjct: 235 LARRVGGHLLKDEELLEEVTNLVEFPYPILGSFEEEFLKLPKEVPVVVMKDHQKFFAVTD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L N F+ V+NI+ D + + +G +V+ ARL+DAL F+ D+ Sbjct: 295 EAGNLKNYFVGVANIKPVDD-STVCRGYEKVLRARLKDALFFFNEDRK------------ 341 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDR 413 K L++R+ +L+ ++FH K+GT ++ R+ L +A + R Sbjct: 342 --------KRLEERVPKLE--GIIFHEKLGTMLQKTKRLEGLAPWVAGVTGLGSEGESRR 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L KADL TE+V EFPELQG +GK YA+L E + AIEEH PR ++V Sbjct: 392 AAHLCKADLLTEMVNEFPELQGTMGKYYALLDGEPEAVAVAIEEHYLPRFSGDSVAKTAA 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----- 528 + +S+A+K+D L F + KP+GS DP+ALRR LG+I+ ++EN++ + + + Sbjct: 452 GVALSVAEKVDNLTGFIGVGLKPTGSADPFALRRNALGLIQTLIENELFLDILEAAREAA 511 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + F +RLK +L ++ R D +EA+L + K Sbjct: 512 RLYGEQGIELIREAPEETAEFVKERLKNFLKEKGFRPDTLEAVLAV-THDPYDAFLRAKA 570 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + + + + E L++ +R+ I+ + E E+ L+ + + Sbjct: 571 VEKLRENPEFEATLITMRRVVNIIPEGFEATDFTP--------QGEFEENLFNAFKELQS 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + + Y + + S+ ++ FFD V+V D +VR+ RLSLL+ I + +L +I Sbjct: 623 KLNKLISERNYTEALLQVSSLKPAVDAFFDNVMVMDRDPQVRNRRLSLLKTIADQLLKLI 682 Query: 697 NVQKIV 702 + K+ Sbjct: 683 DFSKLA 688 >gi|257875468|ref|ZP_05655121.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257809634|gb|EEV38454.1| glycyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 696 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 332/720 (46%), Gaps = 77/720 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L + Y + Y TP RL +Y+ G+ + EE GP Sbjct: 21 PAHVVTPSMKQLQEKTAAFLDAHALPYTTIEAYSTPRRLAVYVTGIPEKQADTQEEVKGP 80 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T I KG Y+ V + + +VLK Sbjct: 81 AKKIALDEAGNWSKAAQGFVRGQGLTTDD---ITFRELKGVEYVYVTKHTQGQPTVEVLK 137 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + I + +P +M W+ F +IRP+ I+ + E++I + +I Sbjct: 138 G-LQEVITSLTFPVTMHWADYD-----FEYIRPIHWIVALF-----GEQVIPFQILDIVT 186 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G + GHRF + D Y+ ++ V+ DP R+ I + +A + Sbjct: 187 GRESKGHRFLG-EAVTFDHADDYLEKMKHQFVIADPSERQQMITAQINAIAQENNWRIDL 245 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLLEE+ LVE+ F+G F++KYL +PEE++ ++K +Q+ F RT +G L FI Sbjct: 246 DEDLLEEVTNLVEYPTAFVGDFEEKYLSVPEEVLVTSMKEHQRYFDVRTLDGELLPHFIS 305 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 N A +++GN +V+ ARLEDA F+ D+ + Sbjct: 306 ARNGDAV-KIDNVIKGNQKVLTARLEDAEFFYNEDKKL--------------------TI 344 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 D + +L V FH KIG+ E++ R+ + + I + + ++ + RA + K DL Sbjct: 345 DHCVEKLK--QVTFHEKIGSLYEKMQRVGLAAQIIGKTVGLTQEELTDLQRAAQIYKFDL 402 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EFPELQG +G++YA++Q E + AI EH P +P +KI +++ADK Sbjct: 403 VTNMVGEFPELQGIMGEKYALIQGEKPAVAQAIREHYMPISAEGELPQSKIGAVLAIADK 462 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LD+L+ F+A++ PSGS DPYALRR T GIIRI+ E + P +Q E Sbjct: 463 LDSLLAFFAVDMVPSGSNDPYALRRQTYGIIRILAEKRWYFPFAQLQEEIREAINAQPEV 522 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + + F RL+ +L ++ RHD+IEA+L ++ T+ + + L E Sbjct: 523 FGIQLAAGQEQVTDFVKGRLRQFLLSKNTRHDVIEAVLGARQADISTLFETAQMLREHLQ 582 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + + + R+ + E I P ++E LY + Sbjct: 583 DNDFKPSMEALTRVINLAKKAELDQ----AAIDPALFENDSETALYEAVLTVEDKFPHQT 638 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + Y L ++ IE +FDQ +V V+D ++R NR +LL I + L V ++ ++ Sbjct: 639 MEENYQS----LVALRPLIEAYFDQTMVMVEDEQIRRNRFALLDKIAKMSLAVASLDALI 694 >gi|312874251|ref|ZP_07734285.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2052A-d] gi|311090321|gb|EFQ48731.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2052A-d] Length = 689 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 352/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAGQINPDLFENNSEKELYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|116492863|ref|YP_804598.1| glycyl-tRNA synthetase, beta subunit [Pediococcus pentosaceus ATCC 25745] gi|122265673|sp|Q03F66|SYGB_PEDPA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116103013|gb|ABJ68156.1| glycyl-tRNA synthetase beta chain [Pediococcus pentosaceus ATCC 25745] Length = 690 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 206/730 (28%), Positives = 351/730 (48%), Gaps = 76/730 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LLEI EEIPA + + + L + LKE + Y ++ + TP RL + + GL Sbjct: 1 MAHNYLLEIGLEEIPAHVVTPSIKQLVQKVTAFLKENRLTYDSIDHFSTPRRLAIRINGL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 P+ E+ GP G KA GF R GL T+ D K VY+ Sbjct: 61 GDQQPDIEEDAKGPARKIAQDADGNWTKAAIGFTRGQGL-TVDDITFKTIKGTDYVYVHK 119 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 L K ++ +++L + ++ + +P M+W+ F ++RP++ ++ IL Sbjct: 120 LIK-GKMTKEILTG-LKEVVESINFPTMMKWANFD-----FKYVRPIRWLVSIL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+++ + ++ G T GHRF +++ + + Y L + V++D + R+ I N Sbjct: 168 EEVLPFSILDVTAGRRTEGHRFLG-EAVELANAEEYEAKLHDQFVIVDADERKQLISNQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A + + + LLEE+ LVEW F G FD+KYL +PEE++ +++ +Q+ F Sbjct: 227 KAIAESNRWNVTPNPGLLEEVNNLVEWPTAFNGGFDEKYLAIPEEVLITSMRDHQRFFFV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R + G L FI V N + +V+GN +V+ ARLEDA F++ DQ + N Sbjct: 287 RDQAGKLLPNFISVRNGN-EEFIENVVRGNEKVLTARLEDAAFFYEEDQKHDINY----- 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + RL V FH KIG+ E++ R+ + K I ++ ++ Sbjct: 341 ---------------YVDRLK--KVSFHDKIGSMYEKLQRVNSIAKVIGNTLNLNQTELD 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +DRA ++ K DL T +V EF ELQG +G++YA L EN + AI EH P ++P Sbjct: 384 DIDRATMIYKFDLVTGMVGEFSELQGVMGEKYAQLNGENQAVAQAIREHYMPNSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + V+LADK D + +F++ PSGS DPYALRR GI+RI+ + L+QF Sbjct: 444 ESVTGAVVALADKFDNIFSFFSAGMIPSGSNDPYALRRHAYGIVRILNSRDWQLDLNQFK 503 Query: 529 -------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 ++ FF+DR+K L + I HD++E +L N ++ Sbjct: 504 SQVKTELAENGTAFGVDVDQNFDQVLNFFNDRIKQLLDHQKISHDIVETVLTGNNHDVTE 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 I++ + L + +S+ + + + R+ +I E+ L + PQ +E L+ Sbjct: 564 IIEAAQVLADAKASSTFKDDIEALTRVQRIATKNEESGE---LNVDPQLFNNASEGELFD 620 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I E+ ++ Q+ L + I +FD +V D ++ NRL+++ + Sbjct: 621 QIIKI-----EAANNLTMSQLFAKLCELTPAISKYFDATMVMDKDENIKRNRLNMMSRLA 675 Query: 690 NIILIVINVQ 699 N+IL + ++ Sbjct: 676 NLILKIGDLT 685 >gi|229552310|ref|ZP_04441035.1| glycine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539719|ref|YP_003174218.1| glycyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus Lc 705] gi|229314292|gb|EEN80265.1| glycine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151395|emb|CAR90367.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus Lc 705] Length = 689 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 203/731 (27%), Positives = 345/731 (47%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L+EI E++PA + + + LK + + + +Y TP RL L + L+ Sbjct: 3 HDYLIEIGLEDMPAHVVTPSINQFHDKTVAFLKANHLEHGQIDRYATPRRLALLVHDLAA 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP G KA GF RS G+ D K VYL Sbjct: 63 KQADVETDVKGPAKKIAQDADGNWTKAAIGFSRSQGMTP-DDIVFKTIKGVDYVYLHKAI 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K K ++L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 122 KGKE-AAEILPGML-DVIKGLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDT 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G +T GHRF P+ + + D Y+ L++ V+++P R+ I + Sbjct: 170 VVPMKLLDVEAGRVTQGHRFLG-KPVTLPNADAYVAALKDQFVIVEPAARKQLIREQIEQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD KYL +PE ++ ++K NQ+ F R Sbjct: 229 IATDHQWQIELDSDLLEEVNNLVEWPTAFAGTFDPKYLAIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G + N FI V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 QAGKMVNAFIGVRNGN-HDHLNNVIAGNEKVLTARLEDAAFFYAEDQK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 + + + + RL V FH KI + ++++R +V+ +A + A + Sbjct: 336 --------RSIAEDVERLKA--VSFHDKISSMYDKMARTKVIAALLADQFGLTADEKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPIAADGALPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADKLD+L++F+A++ PSGS DPYALRR GI+R+I E+ L+ Sbjct: 446 LVGTVLAIADKLDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAEHDWPFALASLQPT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q L F DR K L + IRHD+++A+ + ++ I+ Sbjct: 506 IAKALAEADQTNGLDFAAHQQELNDFMIDRAKQLLQGQKIRHDIVDAVTVRSDADIAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L + + + + + + R+ +I + ++ + P E +L+ + Sbjct: 566 DAAKLLTQHAADSDFKPVMGALGRVLRITGKQ-----TVTTAVDPTKFENPTEGQLHDAV 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI+ +FD +V DD+ VR+NRL+ LQ + + Sbjct: 621 TTTAKTFAAEPTEADYQ----ALKALAKPIDAYFDATMVMADDKAVRENRLATLQQLAQL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IRQFGDVSQVI 687 >gi|309805181|ref|ZP_07699233.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 09V1-c] gi|308165415|gb|EFO67646.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 09V1-c] Length = 689 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 352/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|78042751|ref|YP_359301.1| glycyl-tRNA synthetase subunit beta [Carboxydothermus hydrogenoformans Z-2901] gi|77994866|gb|ABB13765.1| glycyl-tRNA synthetase, beta subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 690 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 212/729 (29%), Positives = 358/729 (49%), Gaps = 70/729 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D+LLEI EEIPAR E++ LKE GV Y+ + TP R+ Y+KG+ P Sbjct: 2 DYLLEIGVEEIPARFIPGIIEEVKNKGEEFLKEFGVQYEALISEATPRRIVFYVKGVLPK 61 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EKI+E GP G +A+ GF RS G++ I+K+ A + Sbjct: 62 TEEKIQEVKGPAKKASYDSEGNPTRALLGFARSQGIEPNEV--IEKEVNGVIYVFARKKT 119 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++++L I I+ + +PK MRW F +IRP++ ++ +L EK+ Sbjct: 120 GGNPVDELLPEIARKLIKNLSFPKPMRWGDID-----FKFIRPIRWLVSLL-----DEKV 169 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I L++ I I+ GHRF + + Y + E V++ R I HR Sbjct: 170 IPLEIAGIKADRISRGHRFLGQKEVVLDRAADYFVAMRENYVIVSLNERIEMIRAQLHRA 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 ++ G+ + +D++LL E LVE+ V +G ++++L LP+E+I +K +Q+ F Sbjct: 230 SAEEGVVVDQDEELLLENANLVEYPTVVIGEINREFLELPKEVIITPMKEHQRYFPLFKN 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L + F+ V N + A I +G ++V+ ARL DA F++ D Sbjct: 290 DGSLYHKFLAVRNGG-RENLAEIAEGYAKVLKARLYDARFFYRED--------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VD 412 L KPL +L +VF K+GT ++V R++ L I + ++ D + Sbjct: 334 -----LKKPLAAYNEKLTR--IVFQEKLGTVWDKVLRLKELVVAIGRELNCDDEVKSYAV 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL T +V EFPELQG +G++YA+ E +AI EH PR + V T++ Sbjct: 387 RAAELSKADLATNMVYEFPELQGIMGRDYALKSGERKEVAEAIFEHYLPRFSGDIVATSE 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 + I +S A+K+D L F+A+ + P+GS DP+ LRR LG++R ++ENK L + + Sbjct: 447 VGILLSCAEKIDNLTAFFALKQIPTGSADPFGLRRQALGLLRTLIENKRFFSLKKAFDAA 506 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L+ F + R K +L + +D I+A+L D+ + Sbjct: 507 FNLLPAEVREKANFAEVYEELLEFIYQRFKGFLLEEGFSYDTIDAVLATGKDDFYDLYLR 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L + + R + + + + E++ L AEK L+A + Sbjct: 567 VRALENLRNHPSFTALTTTFTRAYNLARKGQGR------EVAESLLYEPAEKELFAEFRE 620 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++E + K Y + + + ++ P++ FF++VLV +D ++R+NRL LL I ++L Sbjct: 621 ISLNVKELLREKAYLKAMEEVAALANPLDRFFNEVLVMAEDEKIRENRLGLLGAIAGLVL 680 Query: 694 IVINVQKIV 702 + ++ KIV Sbjct: 681 EIADLSKIV 689 >gi|254932643|ref|ZP_05266002.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes HPB2262] gi|293584202|gb|EFF96234.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes HPB2262] gi|332311899|gb|EGJ24994.1| Glycyl-tRNA synthetase beta subunit [Listeria monocytogenes str. Scott A] Length = 688 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 198/732 (27%), Positives = 342/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED---LTFREIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 167 GEEIIPFEITGVSTSNTSRGHRFLGKTA-TINQPSDYPNALLEQFVVVNASERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQEGELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 ---------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++ Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + + F +RL++ L IRHD+I+A++ + + Sbjct: 503 VSRIVDMERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGNPNMIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LN+ + + + R+ I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNKHADAEWFRPTIEALTRVVNISKKYED-----GVEVDPSLFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKFDFAGLKIVDR----LKAFADLRTTIDAYFDNTLVMTDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|258508508|ref|YP_003171259.1| glycyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus GG] gi|257148435|emb|CAR87408.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus GG] gi|259649818|dbj|BAI41980.1| glycyl-tRNA synthetase beta subunit [Lactobacillus rhamnosus GG] Length = 689 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 343/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L+EI E++PA + + + LK + + + +Y TP RL L + L+ Sbjct: 3 HDYLIEIGLEDMPAHVVTPSINQFHDKTVAFLKANHLEHGQIDRYATPRRLALLVHDLAA 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP G KA GF R G+ D K VYL Sbjct: 63 KQADVETDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTP-DDIVFKTIKGVDYVYLHKAI 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + ++L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 122 K-GKDAAEILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDT 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G +T GHRF P+ + + D Y+ L++ V+++P R+ I + Sbjct: 170 VVPMKLLDVEAGRVTQGHRFLG-KPVTLPNADAYVAALKDQFVIVEPAARKQLIREQIEQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD KYL +PE ++ ++K NQ+ F R Sbjct: 229 IATDHQWQIELDSDLLEEVNNLVEWPTAFAGTFDPKYLAIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G + N FI V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 QAGKMVNAFIGVRNGN-HDHLNNVIAGNEKVLTARLEDAAFFYAEDQK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 + + + + RL V FH KI + ++++R +V+ +A + A + Sbjct: 336 --------RSIAEDVERLKA--VSFHDKISSMYDKMARTKVIAALLADQFGLTADEKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYARLAGEKPAVAQAIAEHYEPIAADGALPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADKLD+L++F+A++ PSGS DPYALRR GI+R+I E+ L+ Sbjct: 446 LVGTVLAIADKLDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAEHDWPFALASLQPT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q L F DR K L + IRHD+++A+ + ++ I+ Sbjct: 506 IAKALAEADQTNGLDFAAHQQELNDFMIDRAKQLLQGQKIRHDIVDAVTVRSDADIAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + + + + R+ +I + ++ + P E +L+ + Sbjct: 566 AAAKLLTQHAADSDFKPVMEALGRVLRITGKQ-----TVTTAVDPTKFENPTEGQLHDAV 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI+ +FD +V DD+ VR+NRL+ LQ + + Sbjct: 621 TTTAKTFAAEPTEADYQ----ALKALAKPIDAYFDATMVMADDKTVRENRLATLQQLAKL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IRQFGDVSQVI 687 >gi|115379224|ref|ZP_01466340.1| glycyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|310822232|ref|YP_003954590.1| glycyl-tRNA synthetase subunit beta [Stigmatella aurantiaca DW4/3-1] gi|115363756|gb|EAU62875.1| glycyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|309395304|gb|ADO72763.1| Glycyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 703 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 201/733 (27%), Positives = 341/733 (46%), Gaps = 70/733 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLE+ +EEIPA A EDL I+ L E + + +R Y TP RL +++K + Sbjct: 1 MARDLLLEVGAEEIPASFIGPALEDLQRIITTRLAEGRLKHGEVRTYGTPRRLAVWVKDV 60 Query: 60 SPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E+LGP A A F S + + + KG+ A Sbjct: 61 ADAGEDVTSEKLGPSAKAAFDKEGKPTVAATKFAESLKIPVSELGRTQT--PKGEYLSAR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +++ R ++L ++ A+ + + KSMRW ++ RP++ I+ +L + Sbjct: 119 VQEKGRPAAELLPEVLHAAVHGINFRKSMRWGDVD-----LAFARPVQWIVALLGGD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + ++ G T+GHRF +P I++ Y LE+A V+ D RR +L Sbjct: 171 --VLPVVFGDVKSGRTTHGHRFLSPGAIELARPADYEAVLEKAHVVPDIAKRRAMLLQKV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A G +L+ED+ L++++ LVE +G+FD ++L LP E++ +K++Q+ F Sbjct: 229 RAVAQGTGGQLLEDEALVDQVTNLVELPSPVVGTFDARHLDLPSEVLVQEMKSHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI VSN D + ++G RV+ +RL D F+ D+ Sbjct: 289 TDAQGKLLPKFIAVSNTPVKDETLS-LRGYERVLRSRLADGRFFFDEDRK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--AL 410 PL+ R+ +L VV+ ++G+ E+V R R L +A+ + Sbjct: 338 ----------APLEGRVEKLSR--VVWQGQLGSYAEKVERFRTLAVWLAEQTGKNEHSTT 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L+KADL T +V EFPELQG +G+EYA E + AI EH PR + +P+ Sbjct: 386 IQRAATLAKADLVTGMVGEFPELQGVMGREYARAGGEPEAVALAIFEHYLPRNANDALPS 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---- 526 + LAD+LD+L +AI + P+G+ DP+ LRRA L II I+ LS Sbjct: 446 QDPGALIGLADRLDSLCGIFAIGKAPTGAADPFGLRRACLAIINIVFGRGYRFSLSAAVG 505 Query: 527 ------------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + + ++ FF RLK + + R D++EA+L D+L+ Sbjct: 506 EALRLLSPKIANVKRKAGEPEPREQILEFFRGRLKALWSE-NYRTDVVEAVLAVGFDDLV 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 ++ L+ A ++ KR+ I+ + K + +P L E EK L+ Sbjct: 565 AARKRLEALSGIVGRADFTPLAVAFKRVVNIVEKQGKD--VARGQTNPDKLRDEPEKNLH 622 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + + + + + + + ++ FFD+V V +D E+R+NR+ L I Sbjct: 623 SAFTQARGKVAQYVQADDFSSALKEITGLKPAVDTFFDKVTVMAEDPELRENRVRFLTEI 682 Query: 689 KNIILIVINVQKI 701 + V + KI Sbjct: 683 GALFNQVADFSKI 695 >gi|51891713|ref|YP_074404.1| glycyl-tRNA synthetase beta chain [Symbiobacterium thermophilum IAM 14863] gi|51855402|dbj|BAD39560.1| glycyl-tRNA synthetase beta chain [Symbiobacterium thermophilum IAM 14863] Length = 700 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 222/729 (30%), Positives = 344/729 (47%), Gaps = 64/729 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + +LEI +EEIPAR A E L L E + Y+ + + TP RL LY++ L+ Sbjct: 6 NLILEIGTEEIPARFCAPALEQLKENAAKALAEARLDYELVDVFGTPRRLVLYVRNLALR 65 Query: 63 SPEKIEERLGPRVGAGKKA-------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP A F G+ + + +++ D K G+ A R Sbjct: 66 QRDVEVEVKGPPRKIAFDAEGNFTVPARKFAEGQGVA-LEELEVRPDEKGGEYLWARKRI 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +E VL ++ + + WPK+MRW+ + RP+K IL +L + Sbjct: 125 QGESVETVLPPLLAGLVTSIHWPKAMRWADRE-----LRYARPIKWILALL-----GDWR 174 Query: 176 IDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + D+ I + T GHR P PI V D Y + V++D R+ I Sbjct: 175 VPFDVDGIETVSTTRGHRVLGPAEPIAVSDADDYFAKVAGGYVMVDQAVRKQVIWQQVTA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ VG + D+DLLEE+ LVE F GSFD +L +P E++ T+K NQ+ F Sbjct: 235 EAARVGGFVRRDEDLLEELTWLVEQPTAFAGSFDPAFLEVPAEVLVTTMKDNQRYFPVYK 294 Query: 295 REGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V N + + GN +V+AARL DA FW D+ Sbjct: 295 AEGSEELLPYFIGVRNGG-HEHLDIVRAGNEKVLAARLSDARFFWDEDRR---------- 343 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 +PL+ ARL VF K+GTQ ERV R+ L + IAQ + Sbjct: 344 ----------QPLESFNARLKEA--VFQEKLGTQFERVERLVSLSRPIAQALGLSPEQEE 391 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L KADL T +V EFPE+QG +GK+Y + Q + + +AI EH PRG +++P Sbjct: 392 QAARAAWLCKADLMTRMVFEFPEVQGYMGKQYLLHQGGDPAVAEAIYEHYLPRGAGDDLP 451 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 I V+LADKLDTL +++I P+GS+DP+ALRRA G+++ ++EN + + L+ Sbjct: 452 RTGPGIVVALADKLDTLAGYFSIGLIPTGSQDPFALRRAAQGVVQTLVENGLRVDLAALV 511 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +L+ FF R+K+ + R+IR+D+I+A+L ++ V+ Sbjct: 512 SRAIEQYRLPGEAAVKTHSDLMEFFRARVKVLMEQREIRYDVIDAVLAAGFRDVTDAVNR 571 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + + + KR+ + + +S EI P+ AE+ LY D Sbjct: 572 AEALAAVMAEPEFAAVTGAFKRVANLAGKANEAG-AVSAEIDPELFTEPAERDLYGAFVD 630 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + + Y L + P++ F D V VNV+D +VR NR +LLQ + ++ Sbjct: 631 LRPEMKRAYEAGDYRTFYHLATRLKAPVDAFLDTVRVNVEDEKVRANRYALLQALGGLLS 690 Query: 694 IVINVQKIV 702 ++ K+ Sbjct: 691 APADLSKLA 699 >gi|325912694|ref|ZP_08175077.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 60-B] gi|325478115|gb|EGC81244.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 60-B] Length = 689 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 353/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI + +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGLLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANIL---KKADFSEAEQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|325912088|ref|ZP_08174486.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 143-D] gi|325476038|gb|EGC79206.1| glycine--tRNA ligase, beta subunit [Lactobacillus iners UPII 143-D] Length = 689 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 352/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + K+ + L+ LK+ G+ ++N++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVAKSVKQLADRTGKFLKDNGLSFKNIKTFSTPRRLTILVQELAE 62 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP + G KA +GF+R + + D +K Y+ V + Sbjct: 63 KQADIDEIKKGPSKKIALDKDGNWSKAAEGFVRGQNMS-VDDIYFQKIKDVEYAYIHVKK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K+ E +L + ++++ +P MRW ++RP+ I+ + +E Sbjct: 122 EGKKATEILLG--MDQIVKELAFPTKMRWGNYD-----LEFVRPIHWIVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 II + + +I G TYGHRF + + + D Y L+ V+ D R+N IL+ + Sbjct: 170 IIPVKILDIVAGRKTYGHRFLG-ESLVLATSDDYESALKSQFVIADANQRKNMILSQINS 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L ++ D LLEE+ LVE+ +F GSF++KYL +P+E++ ++K NQ+ F Sbjct: 229 LCEKNDWQVKIDSGLLEEVTNLVEYPTIFSGSFNEKYLNIPKEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L N FI + N + D ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 HEGTLINHFIAIRNGNS-DYLDNVIAGNEKVLVARLDDAQFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 PL + +L V FH KIG+ E++ R++++G+ I + I+ +++A Sbjct: 337 ---------PLSHFVEKLS--SVSFHDKIGSMAEKMLRVKLIGEYIGEKINISSSELADF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EF ELQG +G YA L E + AI+E P ++PT Sbjct: 386 DRAADIYKFDLVTNMVGEFAELQGIMGTHYAELAGERKAVSQAIKESYLPSSADGDLPTT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 KI +S+ADKLDT+I F+ P+ S DPYALRR+ GI+RI++ +I + ++ Sbjct: 446 KIGSLLSIADKLDTIIAFFGAGMIPNSSNDPYALRRSAYGIVRILINQSWNISIEDALKD 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + F +R+K L + +D+I+ +L N+ I+ Sbjct: 506 IIALLKGKTVAKLPNDEATQAEISDFIINRVKQLLQVKKYSYDVIDTVLASNQQNVANIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L E +K +K + S RI IL +K + + +I+P +EK LY I Sbjct: 566 SIADILQENHDDSKFKKVVESLTRIANIL---KKASFSEAEQINPDLFENNSEKALYDKI 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + I+ +FD ++ + V+ NRLS L+ I + Sbjct: 623 NLLLDK------SLDVKTLYSEFVQLQPVIDEYFDSNMILDKNEAVKINRLSQLKLIDKL 676 Query: 692 ILIVINVQKIV 702 L ++ K+V Sbjct: 677 ALEFGDLSKLV 687 >gi|46907686|ref|YP_014075.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes serotype 4b str. F2365] gi|47093465|ref|ZP_00231228.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|226224059|ref|YP_002758166.1| glycyl-tRNA synthetase beta chain [Listeria monocytogenes Clip81459] gi|254824483|ref|ZP_05229484.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J1-194] gi|255521273|ref|ZP_05388510.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J1-175] gi|300765601|ref|ZP_07075580.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes FSL N1-017] gi|67461979|sp|Q71ZL2|SYGB_LISMF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|259511927|sp|C1KVA5|SYGB_LISMC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|46880955|gb|AAT04252.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes serotype 4b str. F2365] gi|47018141|gb|EAL08911.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|225876521|emb|CAS05230.1| Putative glycyl-tRNA synthetase beta chain [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293593721|gb|EFG01482.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J1-194] gi|300513702|gb|EFK40770.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes FSL N1-017] gi|328465501|gb|EGF36730.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes 1816] Length = 688 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 198/732 (27%), Positives = 343/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED---LTFREIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 167 GEEIIPFEITGVSTSNTSRGHRFLGKTA-TINQPSDYPNALLEQFVVVNASERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQEGELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 ---------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++ Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 VSRIVDMERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LN+ + + + R+ I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNKHADAEWFRPTIEALTRVVNISKKYED-----GVEVDPSLFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKFDFAGLKIVDR----LKAFADLRTTIDAYFDNTLVMTDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|172037905|ref|YP_001804406.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. ATCC 51142] gi|171699359|gb|ACB52340.1| glycyl-tRNA synthetase beta chain [Cyanothece sp. ATCC 51142] Length = 711 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 198/738 (26%), Positives = 343/738 (46%), Gaps = 70/738 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA +A I+ L+E + N+ Y TP RL + + GL+ Sbjct: 3 FLLEVGTEELPADFIDEAIAQWKQIIPNSLEENFLTPDNLAVYGTPRRLAILISGLAEQQ 62 Query: 64 PEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP A KA +GF R + I + I+ KGD + Sbjct: 63 KDRDEVIKGPPAKAAFKNGKPTKAAEGFARKQEVD-IKELDIRPTE-KGDFVFVEKKIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +++L+ ++P I + + MRW + RP++ ++ + + +I++ Sbjct: 121 RQTKEILQELIPHWINSLEGRRFMRWGNGE-----LRFSRPIRWLVALCDEQILPIEIVN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I ++ GHR P P+ + Y+ L A V +DP+ R+ I D +A Sbjct: 176 GD-STIKSDRLSRGHRILHPDPVSISQASDYVETLRSAYVEVDPKQRQQIIEKDIETIAK 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + +DLL E+I L+E+ G FD ++L LP E+I + +Q+ F + + Sbjct: 235 DLKGKADLPEDLLTEVINLIEYPTAVAGKFDPEFLNLPTEVIITVMVKHQRYFAVKKSDN 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N + I QGN RV+ ARL DA F+ D + Sbjct: 295 ELLPNFITIANGDP-NKKDIIAQGNERVIRARLADAQFFYTSDCD--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRA 414 +PLD + L+ +V F ++GT ++V RI + +++A+ ++ + ++ Sbjct: 339 -----EPLDSYLPELE--NVTFQKELGTMRDKVDRIMEMAQQMAEQLEITEKEQEEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA++ E+ I EH PRG + +P Sbjct: 392 ALLCKADLVTQMVYEFPELQGVMGQKYALVSGESEQVAQGIFEHYLPRGANDIMPKTLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V +AD+LDTLI+ + + P+GS DP+ALRRA II + + ++ I LSQ Sbjct: 452 QVVGIADRLDTLISIFGLGMIPTGSGDPFALRRAANAIISVTWDAQLPINLSQLLIQGCE 511 Query: 529 ----------IEDQNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 + L FF R++ L D +I +DL+ A+L + NLL Sbjct: 512 AFMADHVDKQSPLEALQTFFIQRIQTLLQDEFNIDYDLVNAVLGEADAQYTDRALQNLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR--EISLEISPQYLLLEAEKRL 627 + D + L S+ +K + R ++ A + + S + + +E+ Sbjct: 572 VKDRAEFLQAIRSNGMLDKIYETINRSTRLAAKGDLDYTVLDPSQVVETKLFEKSSEQEF 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREVRDNRLSL 684 Y + + ++ + Y + + L I + FFD VLV ++++VR+NRL+L Sbjct: 632 YNGLMALLSKTIQAQSERNYQLLTEGLLDIVPKVSEFFDGENSVLVMDENQKVRENRLNL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L ++N ++ + IV Sbjct: 692 LGVLRNHGRVLADFGAIV 709 >gi|260664402|ref|ZP_05865254.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii SJ-7A-US] gi|260561467|gb|EEX27439.1| glycyl-tRNA synthetase beta subunit [Lactobacillus jensenii SJ-7A-US] Length = 688 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 199/731 (27%), Positives = 343/731 (46%), Gaps = 77/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L EI +EE+PA + ++ + L+ LK+ G+ ++ ++ + TP RL + ++ L+ Sbjct: 3 KDYLFEIGTEEMPAHVVSRSVKQLADRTSKFLKDNGLEFKAIKTFSTPRRLTILVQDLAE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E + GP G KA GF+R G+ T D + Y+ V + Sbjct: 63 KQADIDEVKKGPAKKIALDSEGNFTKAAQGFVRGQGMTT-DDIYFEDLKGTEYAYVHVQK 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +L + I+ + +P MRW + F ++RP+ ++ + +E Sbjct: 122 AGKLATDILLG--MSDIIKAMTFPTKMRWGSND-----FEFVRPIHWLVSLFGSE----- 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + +I G T GHRF + + + D Y L+ V+ D R+ I+N + Sbjct: 170 VVPVKILDITAGRKTMGHRFLG-DSVILANSDDYEEALKSQFVIADAAERKTMIVNQIDQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L + ++ D LLEE+ LVE+ VF GSFD+ YL +P+E++ ++K NQ+ F Sbjct: 229 LVAENNWKVKLDASLLEEVTNLVEYPTVFAGSFDESYLNIPDEVLITSMKDNQRYFEVYD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L N FI V N + ++ GN +V+ ARL+DA F+ D+ Sbjct: 289 QDGKLINHFISVRNGN-KEFLENVISGNEKVLVARLDDAKFFYDEDKKY----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV--- 411 PL ++RLD V FH KIG+ E++ R+R++G+ +A+ ++ Sbjct: 337 ---------PLSHFVSRLD--KVSFHDKIGSMAEKLIRVRIIGEYLAKKFGLSDEVIKNF 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA L K DL T++V EF ELQG +G YA L EN AI+EH P +PT+ Sbjct: 386 DRASELYKFDLVTQMVGEFAELQGVMGMHYAELAGENKDVALAIKEHYMPLTAEGELPTS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 ++ +S+ADK D +I F+A P+ S D YALRR GI+RI+L + + + Sbjct: 446 EVGALLSVADKFDNIITFFAAGMIPTSSNDLYALRRYAYGIVRILLNENWSLAIDKALPK 505 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ED+ + LF DR+K +L + ++D+I+A+L + I+ Sbjct: 506 MVELLDGKTKAKMPKTSQEDEEISLFIRDRIKQFLQTNNYKYDVIDAVLHSSQKDPSRIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S + + + S RI IL + K + + +E LY Sbjct: 566 AAAKVLQAHHDSPEFKPVVESLIRIENILKKAKYKGDSV---VKSDLFEDNSENELYLAS 622 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + S+ + I+ +F+ ++ D V++NRL+ L I + Sbjct: 623 QNLQ-------AIDNLTELYEAFVSMQKVIDRYFEVNMIMAKDEAVKNNRLAQLSQINEL 675 Query: 692 ILIVINVQKIV 702 + + K+V Sbjct: 676 ATRLGALSKLV 686 >gi|290894220|ref|ZP_06557189.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J2-071] gi|290556217|gb|EFD89762.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL J2-071] Length = 688 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 202/732 (27%), Positives = 343/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++G+ Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + G Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD---LTFRDINGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSTLLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 167 GEEIIPFEITGVTTSNTSRGHRFLGKSA-TIKQPSDYPNALLEQFVVVNAEERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++ G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQAGELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 ---------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGSAELPGADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYED-----GVEVDPALFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|16803498|ref|NP_464983.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes EGD-e] gi|224501601|ref|ZP_03669908.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL R2-561] gi|25009330|sp|Q8Y754|SYGB_LISMO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|16410887|emb|CAC99536.1| glyS [Listeria monocytogenes EGD-e] Length = 688 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 202/732 (27%), Positives = 344/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++G+ Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEGM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD---LTFRDIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSTLLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 167 DEEIIPFEITGVTTSNTSRGHRFLGKSA-TIKQPSDYPNALLEQFVVVNAEERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++ G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQAGELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 ---------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYED-----GVEVDPALFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|288574811|ref|ZP_06393168.1| glycyl-tRNA synthetase, beta subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570552|gb|EFC92109.1| glycyl-tRNA synthetase, beta subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 688 Score = 698 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 207/720 (28%), Positives = 347/720 (48%), Gaps = 59/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + +LEI +EEIP+R +A +L+ I E + N+ Y TP RL L +K L+ Sbjct: 5 NLILEIGTEEIPSRFMPRALRELADIASAEFSEARISCGNIETYGTPRRLVLSIKKLNSR 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP + +A GF +S ++ K+D AV+ + Sbjct: 65 QDDLSEEFKGPAWKSAFDGNGTPTRAAIGFAKSKNIEVEDLE--KRDVNGIPYVFAVVNQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 D+L ++ + ++ +PK+M W ++ + RP++ ILC+L +K+ Sbjct: 123 KGGQTLDLLPDMLCRIVNRLVFPKNMYW-----KKTSVRFARPIRWILCLL-----DDKV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + +L I G I+ GHRF + V Y+ L + V++D + R+ +L+ L Sbjct: 173 VSFELNGIKSGQISRGHRFMGAPSVSVSKESSYMEKLYDNYVIVDQKKRKEKMLSAIAIL 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + + +D DL+EE + LVE+ F G FDKKYL LPEE++ T+K +QK F R Sbjct: 233 EKEMDGTIDKDPDLIEENLFLVEYPVPFYGKFDKKYLELPEEVLVTTMKHHQKYFPVRDH 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ VSN +A + IV+GN RV+ ARLEDA FW D Sbjct: 293 SGKLMPYFVGVSNNRAVNMN-VIVEGNQRVLRARLEDASFFWNEDSR------------- 338 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDR 413 +PL ++ RL VV+ K+G+ ++V L + + ++ + + L++R Sbjct: 339 -------EPLASKLDRLKT--VVYQEKLGSVYDKVMITVDLVRSLTSMLGLEEHIKLIER 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSK+DL T +V EFPELQG +G+EYA+ E+ AI E P+ + P++ I Sbjct: 390 AAILSKSDLVTNMVYEFPELQGIMGREYALKDGEDPRVAMAIYEQYLPKSAGDETPSDVI 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 + L++++ ++ + + +PSGS+DPY LRRA + II +D+ L +F++ Sbjct: 450 GAVLGLSERVFNMVGAFKMGFRPSGSQDPYGLRRAVRCVNEIIWSLSLDVNLDEFLKEAA 509 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + LI F RL + L ++D HDL E + L + ++ L Sbjct: 510 HSLQLEKEPMEELISFIRQRLLIQLKEKDFSHDLAELAVSVTGGRPLQALRFLESLKAVQ 569 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + +A R+ ILA K E + LL+ AEK L + + ++ Sbjct: 570 EEQWFINLVTAAVRVQNILA---KNGEERGSSVEVAKLLMPAEKDLAEAVESCSRTVCKA 626 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + + + L + I FFD V+V +D VR NRL+LL +++ + N+ ++ Sbjct: 627 VEEDNWDLLMESLSRLSPSITSFFDDVMVMDEDSTVRANRLALLGECEDLFREIGNLSRL 686 >gi|258405806|ref|YP_003198548.1| glycyl-tRNA synthetase, beta subunit [Desulfohalobium retbaense DSM 5692] gi|257798033|gb|ACV68970.1| glycyl-tRNA synthetase, beta subunit [Desulfohalobium retbaense DSM 5692] Length = 696 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 213/730 (29%), Positives = 336/730 (46%), Gaps = 65/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDF+ EI +EEIPAR + + L LL+E+ + + Y TP RL +Y L Sbjct: 1 MPDFVFEIGTEEIPARFLPRLRDQLVETTGRLLQEQELS-AEVTSYATPRRLVVYASQLP 59 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G KA GF +S G++ D + ++G Sbjct: 60 AKQPVREELVTGPPVAIAYDDNGEPTKAAQGFAKSQGVEV--DALFSEQTERGAYLAVRK 117 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++L + + + +PKSMRW S ++ RP++ +L +L +E Sbjct: 118 TVGGNDARELLPQLCQELLAALSFPKSMRW-----EASQATFARPVRWLLALLDSE---- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 I+ ++ + G T+GHR P +V Y L + V+LD R I +A Sbjct: 169 -IVPVEAVSLTAGRQTFGHRTMGAGPWEVPEAASYFEILRDKGRVILDVAERTRRIREEA 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ASA G + D+ LL E+ LVEW Q +G FD +L LP ++ +++++QK F Sbjct: 228 EAQASAHGGRVAWDESLLGEVADLVEWPQAVLGGFDASFLELPRAVLLTSMQSHQKSFGV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L F+ N+ D + +G RV+ ARLEDA FW+ D Sbjct: 288 ENDAGELLPYFVCTLNLVPQD-LDLVRKGWERVLRARLEDARFFWQVD------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 L + +LD V+F +G+ G++ R+ L ++A + + A Sbjct: 335 --------GKASLTTWLDQLD--KVIFLGPLGSMGDKARRLEGLAGEMAARVAPEAADSA 384 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+K DL +E+V EF ELQG +G Y+ + E S A+ EH P GP VP+N Sbjct: 385 QRAGRLAKTDLVSEMVGEFAELQGFMGGVYSRQKGETASVAQAVAEHYLPTGPESAVPSN 444 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 V+LADK DTL+ + ++ PSG+ DPYALRR LGIIRI+LE + L Sbjct: 445 AEGAVVALADKADTLVGCFGLDMVPSGANDPYALRRQALGIIRILLEYGWRLSLRDLLSW 504 Query: 529 ----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + + L FF RLK Y R +++A L D++ + Sbjct: 505 AQQAYAKDVQWKSEPGVALETLETFFGHRLKAYFQGRGYGTKIVDAALGAGWDDVPALAQ 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVI 631 + L+ F + E+ +L+ KR I+ + + + ++ S L E EK L A + Sbjct: 565 RLDALHGFAAEEDFEQAVLTFKRADNIIRKQGTQIDGDLDGGYSATALQEEQEKTLAAAL 624 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D + + + + LL + ++ FFD V+V DD E+R NRL+LL+ + + Sbjct: 625 EDLAPRWAALWEQEAFDDLFGLLRELRPAVDGFFDHVMVMCDDPELRHNRLNLLKALTDR 684 Query: 692 ILIVINVQKI 701 + ++ + K+ Sbjct: 685 LSLLADFSKL 694 >gi|325569855|ref|ZP_08145849.1| glycyl-tRNA synthetase beta subunit [Enterococcus casseliflavus ATCC 12755] gi|325156978|gb|EGC69146.1| glycyl-tRNA synthetase beta subunit [Enterococcus casseliflavus ATCC 12755] Length = 690 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 333/720 (46%), Gaps = 77/720 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L + Y + Y TP RL +Y+ GL + E+ GP Sbjct: 15 PAHVVTPSMKQLQEKTAAFLDAHALPYTAIEAYSTPRRLAVYVTGLPEKQADTQEDVKGP 74 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T I KG Y+ V + + +VLK Sbjct: 75 AKKIALDEAGNWSKAAQGFVRGQGLTTDD---ITFRELKGVEYVYVTKHTQGQPTVEVLK 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + I + +P +M W+ F +IRP+ I+ + E++I + +I Sbjct: 132 G-LQEVITSLTFPVTMHWADYD-----FEYIRPIHWIVALF-----GEQVIPFQILDIVT 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G + GHRF + D Y+ ++ V+ DP R+ I + + +A + Sbjct: 181 GRESKGHRFLG-EAVTFDHADDYLEKMKHQFVIADPSERQQMITSQINAIAQENNWRIDL 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLLEE+ LVE+ F+G F++KYL +PEE++ ++K +Q+ F RT +G L FI Sbjct: 240 DEDLLEEVTNLVEYPTAFVGDFEEKYLSVPEEVLVTSMKEHQRYFDVRTLDGELLPHFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 N A +++GN +V+ ARLEDA F+ D+ + Sbjct: 300 ARNGDAV-KIDNVIKGNQKVLTARLEDAEFFYNEDKKL--------------------TI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 D + +L V FH KIG+ E++ R+ + + I + ++ + RA + K DL Sbjct: 339 DHCVEKLK--QVTFHEKIGSLYEKMQRVGLAAQIIGNTVGLTQEELTDLQRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EFPELQG +G++YA++Q E + AI EH P +P +KI +++ADK Sbjct: 397 VTNMVGEFPELQGIMGEKYALIQGEKPTVAQAIREHYMPISAEGELPQSKIGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LD+L+ F+A++ PSGS DPYALRR T GIIRI+ E + P +Q E Sbjct: 457 LDSLLAFFAVDMVPSGSNDPYALRRQTYGIIRILAEKRWYFPFAQLQEEIREAINAQPEI 516 Query: 531 --------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + + F RL+ +L ++ RHD+IEA+L ++ T+ + + L E Sbjct: 517 FGIQLAAGQEQVTDFVKSRLRQFLLSKNTRHDVIEAVLGARQADISTLFETAQMLREHLQ 576 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + + + R+ + E + I P ++E LY + Sbjct: 577 DTDFKPSMEALTRVINLAKKAELEQ----AAIDPALFENDSETALYEAVLTVENKFPHQT 632 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + Y L ++ IE +FDQ +V V+D ++R NR +LL I + L V ++ ++ Sbjct: 633 MEENYQS----LVALRPLIEAYFDQTMVMVEDEQIRRNRFALLDKIAKMSLAVASLDALI 688 >gi|56963450|ref|YP_175181.1| glycyl-tRNA synthetase subunit beta [Bacillus clausii KSM-K16] gi|81822137|sp|Q5WHD5|SYGB_BACSK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56909693|dbj|BAD64220.1| glycyl-tRNA synthetase beta chain [Bacillus clausii KSM-K16] Length = 693 Score = 698 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 209/718 (29%), Positives = 329/718 (45%), Gaps = 71/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PAR + L+ + L ++G+ Y + Y TP RL + ++ L+ P+ +E GP Sbjct: 15 PARFVTPSITQLAEKVQAWLDDKGLSYGEIHSYATPRRLAILVENLADRQPDIHDESRGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 + GA KA GF + G++T S +IK D A K +L Sbjct: 75 ALKIAKDESGAWTKAALGFAKGQGVET-SQLEIKAVNGT-DYVFAKTHKKGEKTSVLLPE 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I + +PKSMRW+T + + RP++ ++ + E +I + I G Sbjct: 133 -LKELITGLTFPKSMRWNTY-----SLRYARPIQWLVALY-----GEDVIPFSINGIETG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 T GHRF + + Y L+ V+ D E R+ AI++ ++ + D Sbjct: 182 RNTTGHRFLGAD-FPLDNPIEYADALKRQYVIADAEERKAAIVSQLKQMEEEHSWVVPID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LLEE+ LVE+ GSFD +L LP+E++ T++ +Q+ F ++G L FI V Sbjct: 241 EALLEEVTQLVEYPTALSGSFDDSFLALPKEVLITTMREHQRYFPVEAKDGRLLPYFITV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N + + +GN +V+ ARL DA F+ DQ L Sbjct: 301 RNGN-EEYIENVAKGNEKVLRARLSDAAFFYHEDQKI--------------------SLQ 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADLC 423 A+LD ++VFH IGT GE+V+RI L K +A L + V+RA ++K DL Sbjct: 340 AANAKLD--NIVFHEAIGTMGEKVARIGELSKWLAGEANLGAQERQTVERAAAIAKFDLV 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EFPELQG++G+EYA E AI E PR + VP + ++LADKL Sbjct: 398 TYMVGEFPELQGRMGQEYAEKAGETPQVAKAIYEQYLPRYAGDKVPETEAGAVLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------- 528 DT+++ ++I P+GS+DPYALRR GII I+L+ ++ + L Sbjct: 458 DTVVSCFSIGLIPTGSQDPYALRRQATGIIHILLQTEMPLTLENMAVHALDSIAKKGFMT 517 Query: 529 ----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 Q LI FF +RLK + + R+D+++A+L ++ T+ + L E Sbjct: 518 EKVETTKQELISFFANRLKHVMLEAGFRYDIVDAVLAAPLVDVYTMFAKARLLTERAEDR 577 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + ++ S R+ + K + +S E E RL A + + E+ Sbjct: 578 EFKEVTESLSRVTNLAKKAPK-----GVFVSENLFENETESRLLAATLEVEFGLAEAWKV 632 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 K + L I FFD +V D+ R+NRL+LL + I + QKIV Sbjct: 633 KDAYAAYQALAQCRATINTFFDHTMVMADNEATRNNRLALLDRLAKSIQSYADFQKIV 690 >gi|224369902|ref|YP_002604066.1| GlyS [Desulfobacterium autotrophicum HRM2] gi|259511921|sp|C0QJ89|SYGB_DESAH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|223692619|gb|ACN15902.1| GlyS [Desulfobacterium autotrophicum HRM2] Length = 689 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 192/727 (26%), Positives = 326/727 (44%), Gaps = 64/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EEIPA A + L + + + TP RL L ++ + Sbjct: 1 MNNLLIEIGAEEIPAGYILPALTSFCDRVTAALTGARINHGKTAVFGTPRRLALMVEDVQ 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +GP G A F G+ + + I D KG AV+ Sbjct: 61 ACQAPQKTTLMGPPQRIGFDNEGKPTLAGVKFAEKAGI--VPEEIIITDNGKGPYLSAVI 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + L E +L+ ++P IQ +P+PKSM W ++ RP+ S+ +L + Sbjct: 119 EESCLLTEAILEGVLPELIQAIPFPKSMHWGDLD-----VTFARPIVSLTALL-----GK 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ + I + +GH F AP +++S D Y+ L +A V+ D RR + Sbjct: 169 TVLNFKIGNIASASFVFGHSFMAPERFELESADAYLDTLRKAGVVADIGERRTILKESIK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A ++ED++L++ + LVE+ +G FD+ +L LP+E++ ++ +QK F Sbjct: 229 AAADKACATIIEDEELVDIVNNLVEYPYPVVGHFDEVFLELPDEVLITAMREHQKYFALA 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L CFI V+N +A D + +G+ +V+ ARL DA F+ D Sbjct: 289 DTAGKLMPCFIAVNNTRARDM-DVVAKGHGKVIRARLADAQFFYHVD------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL--- 410 L LD + +L V F A +G+ E+ R+ VL + +A L++AD L Sbjct: 335 -------LESTLDDFVEKLKA--VTFQASLGSMYEKTGRLVVLVEFLAGLVNADQELQKK 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA LSKADL +++V EF +LQG IG+ YA E+ AIEEH +P ++P Sbjct: 386 LMRAARLSKADLVSQMVIEFTKLQGIIGRVYAQKGGEDPEVAMAIEEHYRPVYSGGDLPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +++ADK DTL ++ N P+G+ DPYALRR ++GI++I+LE D L + Sbjct: 446 TDTGKILAIADKTDTLCGCFSANLIPTGASDPYALRRQSIGILQIMLEAGFDFSLRALVR 505 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ F R+ L D+ + + A L N+ I Sbjct: 506 RGVAQYQTDPDKKNEISTQILEFLKGRMTNMLVDQGFSREAVNAALSVSFYNVPDAFLRI 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K L+ E + KR+ IL +K + ++ +AEK L+ + Sbjct: 566 KALDILRQEPDFEPLSTAFKRVVNIL---KKAGGDAKTRVNVNLFNCDAEKALHQACGEV 622 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + Y + ++ ++ F+ V+V DD +R NR++LL + + Sbjct: 623 TERVDTCIKAGDYGAALKEISTLRPHVDRLFEDVMVMDDDVALRINRMALLSSVAALFRN 682 Query: 695 VINVQKI 701 + + +I Sbjct: 683 IADFSQI 689 >gi|217977293|ref|YP_002361440.1| glycyl-tRNA synthetase, beta subunit [Methylocella silvestris BL2] gi|217502669|gb|ACK50078.1| glycyl-tRNA synthetase, beta subunit [Methylocella silvestris BL2] Length = 737 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 295/722 (40%), Positives = 403/722 (55%), Gaps = 69/722 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+DL ++ L E+G+ + + TP RL L++ GL Sbjct: 10 MPDLLLELFSEEIPARMQAQAADDLKRLVTEALAEKGLSCEGAAAFATPRRLALHVAGLP 69 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKG-DVYLAVLRKPKRL 119 P+ EE+ GPRVG+ + A+ GFL+S GL ++++ +I+ DPKK + YLAV+ + + Sbjct: 70 ARQPDLREEKKGPRVGSPEAAVQGFLKSAGLASLAEAKIEVDPKKKTEFYLAVVERKGQP 129 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 DVL I+P I++ PWPKSMRW A W+RPL +I+ E +I+ Sbjct: 130 TLDVLAEILPAVIKRFPWPKSMRWGAASVSPEALRWVRPLHAIIATFGPETEDPEIVPFS 189 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + I ++T+GHRF AP PIKV+ D Y LE+A V+LDP RR+ IL+D LA A Sbjct: 190 VGGIEASDVTFGHRFMAPGPIKVRRFDDYAPALEKAKVVLDPTRRRDIILHDLRDLAFAQ 249 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GV 298 GLEL+ED LLEE+ GLVEW V G FD +L +P E+IR TI+ NQKCFV E G Sbjct: 250 GLELIEDAALLEEVSGLVEWPVVLTGEFDAVFLDIPPEVIRATIRANQKCFVLNDAESGK 309 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LAN F LV+NI A DGGAAI GN+RVV ARL DA FW+ D Sbjct: 310 LANQFALVANIDAPDGGAAIAAGNARVVRARLSDAKFFWETD------------------ 351 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 L L+ R+ +L+ V FH K+GTQ ERV R+ L + IA + AD L RA +L+ Sbjct: 352 --LKVRLEDRLQKLEA--VTFHEKLGTQRERVRRLEALARLIAPQVGADPELAARAALLA 407 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA Q E +AI +H KP+GP + +P ++I V+ Sbjct: 408 KADLPSEMVGEFPELQGLMGRYYAAAQGEAPEVAEAIGDHYKPQGPGDRIPAAPVTIAVA 467 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE-------------------- 518 LADK+D L FWAI+EKP+GSKDPYALRRA LG++ I+LE Sbjct: 468 LADKIDILAGFWAIDEKPTGSKDPYALRRAALGVVAIVLENRLRLRLLDILALHKKIVDD 527 Query: 519 --NKIDIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 K+ + ++ +L+ FF DRLK+YL +R RHDLI+A+ Sbjct: 528 DLRKLHLERARGGGGDSAAMTGQVGPDTVPADLLGFFADRLKVYLRERGARHDLIDAVFA 587 Query: 562 -PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-----NREISLEIS 615 P D+L I+ ++ L F S+ G L +R IL EEKK L S Sbjct: 588 LPGQDDLTLILRRVEALGAFLSAEDGANLLGGYRRAANILRAEEKKFGAEEAASYELPFS 647 Query: 616 PQYLLLEAEKRLYAVIS--DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 P L E L V+ ++ + + L + P++ FF++V VN Sbjct: 648 PASLREPEELALANVLDPKGAEPRWSAAIRDEDFEAAMKALAQLRAPVDAFFEKVTVNAP 707 Query: 674 DR 675 D Sbjct: 708 DP 709 >gi|199598418|ref|ZP_03211837.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus HN001] gi|199590737|gb|EDY98824.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus HN001] Length = 689 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 342/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D+L+EI E++PA + + + LK + + + +Y TP RL L + L+ Sbjct: 3 HDYLIEIGLEDMPAHVVTPSINQFHDKTVAFLKANHLEHGQIDRYATPRRLALLVHDLAA 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP G KA GF R G+ D K VYL Sbjct: 63 KQADVETDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTP-DDIVFKTIKGVDYVYLHKAI 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + ++L + I+ + +P M+W F +IRP+ ++ +L + Sbjct: 122 K-GKDAAEILPGM-HDVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDT 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L ++ G +T GHRF P+ + + D Y+ L++ V+++P R+ I + Sbjct: 170 VVPMKLLDVEAGRVTQGHRFLG-KPVTLPNADAYVAALKDQFVIVEPAARKQLIREQIEQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD KYL +PE ++ ++K NQ+ F R Sbjct: 229 IATDHQWQIELDSDLLEEVNNLVEWPTAFAGTFDPKYLAIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G + N FI V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 QAGKMVNAFIGVRNGN-HDHLNNVIAGNEKVLTARLEDAAFFYAEDQK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 + + + + RL V FH KI + ++++R +V+ +A + A + Sbjct: 336 --------RSIAEDVERLKA--VSFHDKISSMYDKMARTKVIAALLADQFGLTADEKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYARLAGEKPAVAQAIAEHYEPIAADGALPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADKLD+L++F+A++ PSGS DPYALRR GI+R+I E+ L+ Sbjct: 446 LVGTVLAIADKLDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAEHDWPFALASLQPT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q L F DR K L + IRHD+++A+ + ++ I+ Sbjct: 506 IAKALAEADQTNGLDFAAHQQELNDFMIDRAKQLLQGQKIRHDIVDAVTVRSDADIAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L + + + + + + R+ +I + ++ + P E +L+ + Sbjct: 566 AAAKLLTQHAADSDFKPVMEALGRVLRITGKQ-----TVTTAVDPTKFENPTEGQLHDAV 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI+ +FD +V DD+ VR+NRL+ LQ + + Sbjct: 621 TTTAKTFAAEPTEADYQ----ALKALAKPIDAYFDATMVMADDKTVRENRLATLQQLAKL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IRQFGDVSQVI 687 >gi|261400609|ref|ZP_05986734.1| glycyl-tRNA synthetase, beta subunit [Neisseria lactamica ATCC 23970] gi|269209693|gb|EEZ76148.1| glycyl-tRNA synthetase, beta subunit [Neisseria lactamica ATCC 23970] Length = 687 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 212/707 (29%), Positives = 351/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAVEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGVPTKALEGFARGAGAK-IEDLTIIND-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSSGEITIENADSYAEQMREQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|161869283|ref|YP_001598450.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis 053442] gi|229558565|sp|A9M127|SYGB_NEIM0 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|161594836|gb|ABX72496.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis 053442] Length = 687 Score = 697 bits (1800), Expect = 0.0, Method: Composition-based stats. Identities = 213/707 (30%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNASVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|116872889|ref|YP_849670.1| glycyl-tRNA synthetase beta chain [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458471|sp|A0AIQ9|SYGB_LISW6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116741767|emb|CAK20891.1| glycyl-tRNA synthetase beta chain [Listeria welshimeri serovar 6b str. SLCC5334] Length = 688 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 201/732 (27%), Positives = 348/732 (47%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVAQLEKRVSDWLNENQITFEKIKTYSTPRRLTVLVEAM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF RS ++ + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFARSQKVEPAD---LTFREIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 167 GEEIIPFEITGVSTSNTSRGHRFLGKTA-TIKQPSDYPNALLEQFVVVNAEERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L S ++ ED+DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELESMENWQIKEDEDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +++ L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSKDEELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 ---------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIAIAIREHYLPSSAEGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TL+ F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSIIAIADKLETLVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLEL 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + + F +RL++ L + IRHD+I+A++ + + + Sbjct: 503 LSRIVDMERAEGAVELPSDDVKKEVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNTIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +VD + LN+ S + + R+ I K E ++E+ P + E+ L+ Sbjct: 563 LVDRAQILNKHVESDWFRPTVEALTRVMNI-----SKKHEGNVEVDPSLFENKYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I R ++ I+ +FD LV ++ E+++NRL+LL + Sbjct: 618 EIEKLKYDYANLTIVDR----LRAFAALRTTIDDYFDNTLVMSENIELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|298369572|ref|ZP_06980889.1| glycyl-tRNA synthetase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298282129|gb|EFI23617.1| glycyl-tRNA synthetase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 687 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 216/707 (30%), Positives = 352/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFTASVAEGLEKAQLIDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHRLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSGGEITIENADSYAAQMREQGKVVASFAERKVAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTIKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E+ L + EK LYA D I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVDESLLQQDEEKALYAAAQDLQPKITAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAEQMNAVADI 682 >gi|315303195|ref|ZP_07873853.1| glycyl-tRNA synthetase, beta subunit [Listeria ivanovii FSL F6-596] gi|313628438|gb|EFR96913.1| glycyl-tRNA synthetase, beta subunit [Listeria ivanovii FSL F6-596] Length = 688 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 198/732 (27%), Positives = 341/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + E L + L E + + ++ + TP RL + + + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVEQLKKRMTDWLHENQITFSEIKTFSTPRRLTVLVSNM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF RS + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFARSQSINPAD---LTFREIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ + +L + + + +P SM W + +IRP+K ++ + E Sbjct: 118 KKEVIGKKTTALLPQ-LQKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMFGTE-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ + N++ GHRF + Y L E V++D R+ AI Sbjct: 170 ---VIPFEITGVVTSNMSRGHRFLGKTA-TIMQPSDYQNALLEQFVVVDATARKEAIAGQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ ++ ED DLLEE+ LVE+ V G+F++ YL LPEE++ T+K +Q+ F Sbjct: 226 LKELAALENWQIKEDTDLLEEVTNLVEYPTVLAGNFEEIYLELPEEILITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +++ L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQDDKLLPHFVTVRNGN-HENLETVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 ---------LKMTIDEAVAKL--PNIVFHEKLGTLTEKMKRVQKVALMLADYLNWKEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T +V EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 EDIIRLTDIYKFDLVTNVVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TL+ F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSLIAIADKLETLVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLEL 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L + IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGAVELPSDDVKKEVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +VD + LN+ S + + R+ I E+ +E+ P E E+ L+ Sbjct: 563 LVDRAQILNKHVESEWFRPTIEALTRVVNISKKYEE-----GVEVDPALFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKYDYASLTIVER----LKAFAGLRTTIDDYFDNTLVMSDNLELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|304388483|ref|ZP_07370586.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis ATCC 13091] gi|304337480|gb|EFM03646.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis ATCC 13091] Length = 687 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 210/707 (29%), Positives = 348/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTADP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + A A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGAGAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E A+E+H +PR + +P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAKAVEQHYQPRFAGDKLPEGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L I ++ + EF + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDIAAKLQAVAEFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V DD V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMADDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|126657519|ref|ZP_01728675.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. CCY0110] gi|126621223|gb|EAZ91936.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. CCY0110] Length = 711 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 200/738 (27%), Positives = 337/738 (45%), Gaps = 70/738 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA +A I+ L+E + + Y TP RL + + L Sbjct: 3 FLLEVGTEELPADFIDEAIAQWKQIIPNSLEENFLTPDKVAVYGTPRRLAVLISELPEQQ 62 Query: 64 PEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP A KA +GF R ++ I D I+ KGD + Sbjct: 63 KDRDEVIKGPPAKAAFKDGKPTKAAEGFARKQEVE-IKDLDIRPTD-KGDFIFIEKKIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +++L+ ++P I + + MRW + RP++ ++ + + +II+ Sbjct: 121 RQTKEILQALIPNWIDSLEGRRFMRWGNGE-----LRFSRPIRWLVALCDKQVLPIEIIN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I ++ GHR P + + Y+ L A V +DP+ R+ I D +A Sbjct: 176 GD-STITSDRLSRGHRILHPDTVSIAQASDYVETLRSAYVEVDPKQRQEIIEKDIETIAK 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + DLL E+I L+E+ G FD ++L LP E+I + +Q+ F + E Sbjct: 235 ELKGKADLPDDLLTEVINLIEYPTAIAGKFDPEFLNLPTEVITTVMVKHQRYFAVKKTEN 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N + I QGN RV+ ARL DA F+ D + Sbjct: 295 ELLPNFITIANGDP-NKKDIIAQGNERVIRARLADAQFFYTADCD--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVDRA 414 +PLD + L+ +V F ++GT ++V RI + ++IA+ ++ D ++ Sbjct: 339 -----EPLDSYLPELE--NVTFQKELGTMRDKVDRIMDMAQQIAKQLEIDEKEQEEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA++ E+ I +H PRG + +P Sbjct: 392 ALLCKADLVTQMVYEFPELQGVMGQKYALVSGESEQVAQGIFDHYLPRGANDIMPKTLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V +AD+LDTLI+ + + P+GS DP+ALRRA II + E K+ I LSQ Sbjct: 452 QVVGIADRLDTLISIFGLGMIPTGSGDPFALRRAANAIISVTWEAKLPINLSQLLIQGCE 511 Query: 529 ----------IEDQNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 + L F R++ L D +I +DL+ A+L + NLL Sbjct: 512 AFMADHADKDSPLEALQTFLIQRIQTLLQDELNIDYDLVNAVLGEADAEYTDRALQNLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRL 627 + D + L E ++ +K + R ++ A + E+ + + +E+ Sbjct: 572 VKDRAEFLQEIRNNEILDKIYETVNRSTRLAAKGDLNYTELDPSEVVQTELFEKSSEQEF 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREVRDNRLSL 684 Y + + ++ + Y + + L I + FFD VLV ++ +VR NRL+L Sbjct: 632 YNGLMALLSKTTQAQSQRNYQLLIEGLLDIVPKVSEFFDGENSVLVMDENPQVRQNRLNL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L ++N ++ + IV Sbjct: 692 LGVLRNHGRVLADFGAIV 709 >gi|262375083|ref|ZP_06068317.1| glycyl-tRNA synthetase beta subunit [Acinetobacter lwoffii SH145] gi|262310096|gb|EEY91225.1| glycyl-tRNA synthetase beta subunit [Acinetobacter lwoffii SH145] Length = 689 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 198/718 (27%), Positives = 340/718 (47%), Gaps = 62/718 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 L E+ EE+P + K + L + LK+ G+ + ++ Y P RL L + + Sbjct: 7 LFELGCEELPPKSLKKLRDALHAETVKGLKDAGLAFDSIEAYAAPRRLALKIVNVDAAQA 66 Query: 65 EKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + + GP G KA++GF+R G+ + K + + Sbjct: 67 DTQKRFDGPAKQAAFDAEGNPTKALEGFMRGQGITVDQVSTFQ--AGKVEKVCYLKDVKG 124 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ +L I+ A+ +P K MR S S ++RP+K ++ + ++D Sbjct: 125 QSLDVLLPQILQNALDNLPIAKRMR-----SAASRTEFVRPVKWVVLLK-----DNDVVD 174 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ GN+T+GHRFHAP I + D Y+ L+ A V+ E R+ I LA Sbjct: 175 ATIQDHKAGNVTFGHRFHAPEAITLAHADEYLAKLKAAHVVASFEERQATIDQQVKALAD 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 V + DL +E+ LVEW SF++++L +P+E + T++ NQK F + Sbjct: 235 EVNAIAIVPADLRDEVTALVEWPVALRASFEERFLAVPQEALITTMQDNQKYFCLVNADN 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI VSNI++ D I++GN +VV RL DA F+ +DQ Sbjct: 295 KLQPYFITVSNIESKDPTQ-IIEGNEKVVRPRLSDAEFFFLQDQK--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 +PL R +L ++VF A++GT + RI L +A + A ++A +L Sbjct: 339 -----QPLASRKEKL--ANMVFQAELGTLWNKSERIAKLAVALAPITGAKAEDAEKAALL 391 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +K DL +E+V EFPELQG G YA L+ EN +++ E P+ + +P K T+ Sbjct: 392 AKCDLTSELVGEFPELQGIAGTYYARLEGENAEVAESLGEQYLPKFAGDVLPKTKTGTTI 451 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------- 530 +LAD+LDTL + I + P+GSKDP+ALRR+ +GI+R++ EN++D+ + I+ Sbjct: 452 ALADRLDTLTGIFGIGQAPTGSKDPFALRRSAIGILRLVTENELDVSIEDLIKLALAAYG 511 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + F R + D+ + D+I+A+ + L + +N F Sbjct: 512 DVLKDHDKTLADAVAFLEGRYRAKYEDQGVAVDVIQAVQALSPKSPLDFDKRVNAVNHFR 571 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + + KR+ ILA E + L+ +AEK L+A ++ ++ Sbjct: 572 ALPEAAALAAANKRVANILAKEAAPEGS----VVEANLVEDAEKALFAELAKIAPQVEPL 627 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 K Y L ++ P++ FFD V+V DD +++ NRL +L ++ + V ++ Sbjct: 628 FAAKDYTAALSALAALRAPVDAFFDGVMVMADDADLKANRLRMLAQLRELFTKVADIS 685 >gi|300768135|ref|ZP_07078040.1| glycyl-tRNA synthetase beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494199|gb|EFK29362.1| glycyl-tRNA synthetase beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 694 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 198/734 (26%), Positives = 348/734 (47%), Gaps = 74/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLEI EE+PA + + L ++ LK+ + +++++ + TP RL + + GL Sbjct: 1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMVKFLKDARLDFEDVKTFSTPRRLTVQVLGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + +E GP G KA GF + G T I KG Y+ V Sbjct: 61 ADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDD---IVFKDVKGTPYVFV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +VL + I K+ +P M+WST +F +IRP++ I+ +L Sbjct: 118 QTFTAGKTAAEVLAAGIEDVITKMNFPTMMKWSTY-----SFKYIRPIRWIVSLL----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + + ++ G ++ GHRF +++ + Y DL V+ D R+ I Sbjct: 168 NDEVVPVQILDVAAGRVSRGHRFLGHD-VEIATAADYEADLASVQVIADAAKRKATIREQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ ++ ++DLLEE+ LVE+ F G FD KYL +P+E++ +++ +Q+ F Sbjct: 227 IAALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFY 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L F+ V N D + GN +V+ ARLEDA F+ DQ + Sbjct: 287 VTDAEDNLLPHFVSVRNGNT-DHLENVALGNQKVLTARLEDAAFFYHEDQQH-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 + + + RL V FH KIGT E++ R+ V+ +A + Sbjct: 338 ------------SIQEYVERLK--KVSFHDKIGTMYEKMQRVMVISDFLADRFGLTETEK 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G +YAVL+ E+ + AI EH P ++ Sbjct: 384 NQLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDL 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P +K+ +++ADK+D++ +F+A+ PSGS DP+ALRR GI+RI+ E D P+ Q Sbjct: 444 PKSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQL 503 Query: 529 --------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + + F DR+K + ++R IR+D+I+ +++ ++ Sbjct: 504 EADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIIDTVIKGSRQDIR 563 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + LN + + + + R+ +I A + +++ + P EAE+ LY Sbjct: 564 EMFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAAGDLT--VDPSLFENEAEQHLY 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + +M + L ++ I +F+Q +V D +VRDN L L I Sbjct: 622 DAVLELQKQFTPAMSMED---RFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTI 678 Query: 689 KNIILIVINVQKIV 702 +I ++ ++ +++ Sbjct: 679 AQMINVMGDLNQLI 692 >gi|325268032|ref|ZP_08134678.1| glycyl-tRNA synthetase beta subunit [Kingella denitrificans ATCC 33394] gi|324980417|gb|EGC16083.1| glycyl-tRNA synthetase beta subunit [Kingella denitrificans ATCC 33394] Length = 705 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 210/696 (30%), Positives = 348/696 (50%), Gaps = 57/696 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLK 57 M L+E+++EE+P + ++ L+ + L++ +I Y +P RL + + Sbjct: 26 MSQTLLIELFTEELPPKALNQLGNHLAQSIAEGLEKAQLIDGATEYTAYASPRRLAVQVA 85 Query: 58 GLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + ++ + GP V A +KAI+GF RS G++ S I D K DVY + Sbjct: 86 RVKSEQADQHIVKKGPAVTANEKAIEGFARSCGVEKSS-LHIVHD-GKQDVYAHEFTQKG 143 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +L IV A++K+P PK MRW + S +++RP+ ++ + +++ Sbjct: 144 QKLAALLGDIVNAAVKKLPIPKVMRWGS-----STHTFVRPVHGLVAM-----HGAEVLP 193 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLA 236 +++ + N T GHRF + I D Y L EE V+ R+NAI A Sbjct: 194 INVLGLDSRNCTLGHRFLSHGEITFAKADDYAAQLAEEGKVIASFAERKNAIRTALDEQA 253 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + + + D+ LL+E+ LVE+ V +F++ +L +P+E + LT++ NQK F + Sbjct: 254 ARLNATVAADEALLDEVTALVEYPVVLQAAFEEHFLAVPQECLILTMQQNQKYFPLLNQN 313 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N F+LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 314 GKLMNRFLLVSNLQTKDP-SHIIQGNERVLRARLSDAEFFYKQDQK-------------- 358 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L+ R+ +L +VV+H KIG+Q ERV R++ + IA ++AD A+ +RA Sbjct: 359 ------ATLESRLPKL--ANVVYHNKIGSQAERVERLQTIAAYIAGCLNADKAVAERAAR 410 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL TE+V EFPELQG +GK YA L E A+E+H +PR + +P + I Sbjct: 411 LAKADLVTEMVGEFPELQGTMGKYYAQLDGETPEIAAAVEQHYRPRFAGDALPESTIGTA 470 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP------------ 524 V+LADKL+TL+ W I P+G KDPYALRR+ LG++R+++ + + I Sbjct: 471 VALADKLETLVGIWGIGLIPTGDKDPYALRRSALGVLRMLMNHDLSIRELLTFVFDSFPK 530 Query: 525 -LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 L + F RL + L + D D++ A+L D + + ++ + +F Sbjct: 531 GLLAEKTVAEVADFMQARLAVLLQN-DYPQDVVAAVLAQRPDRVNNLTAKLQAVVQFKQL 589 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ +L E + + EK L+A + D +Q ++D Sbjct: 590 PESAALAAANKRVQNLLKKSEGALGN----VDAALQQQDEEKALFAAVQDLQPKVQAALD 645 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRD 679 + + L ++ ++ FFD V+V D V+ Sbjct: 646 AQDFAAALSALAAVKPQVDAFFDGVMVMAADAAVKQ 681 >gi|329114987|ref|ZP_08243742.1| Glycyl-tRNA synthetase beta subunit [Acetobacter pomorum DM001] gi|326695430|gb|EGE47116.1| Glycyl-tRNA synthetase beta subunit [Acetobacter pomorum DM001] Length = 709 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 232/719 (32%), Positives = 367/719 (51%), Gaps = 53/719 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +A E+L +L L + QN P R+ L + Sbjct: 24 MPELLIELFSEEIPARMQSQAGENLLRLLTEAL--APLHPQNAVAATGPRRIAASL-NID 80 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR GA KA+DGF R G+ T ++ ++ +P Sbjct: 81 ATVPGRTVSERGPREGAPDKALDGFTRKHGV-TRDALTLQN-----GFWVLEREEPAVSA 134 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + + ++P +++ PWPKSMRW S+F+W+RPL+ ILCIL E + + Sbjct: 135 QTHIAAVLPDLLRRFPWPKSMRWGAG----SSFTWVRPLRRILCILDGEAIPFSLAQGED 190 Query: 181 KE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + N+T GHRF P + V S + + L + V++D RR I + LA++ Sbjct: 191 NGHNLVAANLTEGHRFLNPGAVAVSSATEWRKTLHDRHVMVDAAERRKTIAEGLNTLAAS 250 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 GL++V D L++E+ GLVEW F+G D +++ LP E+++++++ NQ+ F R +G Sbjct: 251 EGLQIVPDSGLVDEVAGLVEWPVPFLGQIDAQFMELPAEVMQVSMRVNQRYFALRNSDGS 310 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A F V+NI +D G IV GN RV+ AR DA HFW D+ Sbjct: 311 AAPRFAFVANIIPADDGTLIVTGNERVLRARFADARHFWDLDRK---------------- 354 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + L R+ LD + FHA +G+QG+R R+ L +A ++ A A +RA LS Sbjct: 355 ----QTLASRLKALD--SITFHASLGSQGDRTRRMVRLAGILADMVGAPKADCERAAELS 408 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFPELQG +G YA E+ + AI E PRGP ++VPT +S+ + Sbjct: 409 KTDLTTGMVGEFPELQGVMGGYYAKHDGESAAVAQAISEQYTPRGPGDSVPTAPVSVVLG 468 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-- 536 LAD++D L+ F+A EKPSGS DP+ LRRA LG+IR+I EN + + L + L Sbjct: 469 LADRIDMLVAFFAAGEKPSGSGDPFGLRRAALGVIRLIRENNLRLDLVRLFVLAAEALPA 528 Query: 537 -------------FFHDRLKLYLHDRDIRHDLIEAI-LRPENDNLLTIVDLIKHLNEFFS 582 F +RL++ + RHD + AI + + +++ ++ L + Sbjct: 529 DLQDAPDLDLLPQFIAERLRVQVRSEGARHDCLAAISVDNSDTDIVRLLARAHALQDMLE 588 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + G+ L + +R IL IE+KK+ P + E+ L+ + +++ Sbjct: 589 TEDGKNLLAATRRAANILRIEDKKDGPHEDSPDPALFTQDEERALFDALERVEPAVEKDF 648 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +R+ S+ EP++ FF+ V VN + E+R NRL LL + ++ ++ + +I Sbjct: 649 AAERFTDAMREAASLREPLDKFFEVVTVNAPEPELRLNRLKLLSRVVRMMRLIADFSQI 707 >gi|254556822|ref|YP_003063239.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum JDM1] gi|308180763|ref|YP_003924891.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045749|gb|ACT62542.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum JDM1] gi|308046254|gb|ADN98797.1| glycine-tRNA ligase, beta chain [Lactobacillus plantarum subsp. plantarum ST-III] Length = 694 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 197/734 (26%), Positives = 348/734 (47%), Gaps = 74/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLEI EE+PA + + L ++ LK+ + +++++ + TP RL + + GL Sbjct: 1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMVKFLKDARLDFEDVKTFSTPRRLTVQVLGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + +E GP G KA GF + G T I KG Y+ V Sbjct: 61 ADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDD---IVFKDVKGTPYVFV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +VL + I K+ +P M+WST +F +IRP++ I+ +L Sbjct: 118 QTFTAGKTAAEVLAAGIKDVITKMNFPTMMKWSTY-----SFKYIRPIRWIVSLL----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + + ++ G ++ GHRF +++ + Y DL V+ D R+ I Sbjct: 168 DDEVVPVQILDVAAGRVSRGHRFLGHD-VEIATAADYEADLASVQVIADAAKRKATIREQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ ++ ++DLLEE+ LVE+ F G FD KYL +P+E++ +++ +Q+ F Sbjct: 227 IAALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFY 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L F+ V N D + GN +V+ ARLEDA F+ DQ + Sbjct: 287 VTDAEDNLLPHFVSVRNGNT-DHLENVALGNQKVLTARLEDAAFFYHEDQQH-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 + + + RL V FH KIGT E++ R+ V+ +A + Sbjct: 338 ------------SIQEYVERLK--KVSFHDKIGTMYEKMQRVMVISDFLADRFGLTETEK 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G +YAVL+ E+ + AI EH P ++ Sbjct: 384 NQLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDL 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P +K+ +++ADK+D++ +F+A+ PSGS DP+ALRR GI+RI+ E D P+ Q Sbjct: 444 PKSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQL 503 Query: 529 --------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + + F DR+K + ++R IR+D+++ +++ ++ Sbjct: 504 EADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIR 563 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + LN + + + + R+ +I A + +++ + P EAE+ LY Sbjct: 564 EMFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAAGDLT--VDPSLFENEAEQHLY 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + +M + L ++ I +F+Q +V D +VRDN L L I Sbjct: 622 DAVLELQKQFTPAMSMED---RFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTI 678 Query: 689 KNIILIVINVQKIV 702 +I ++ ++ +++ Sbjct: 679 AQMINVMGDLNQLI 692 >gi|71909147|ref|YP_286734.1| glycyl-tRNA synthetase, beta subunit [Dechloromonas aromatica RCB] gi|123774244|sp|Q47A67|SYGB_DECAR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71848768|gb|AAZ48264.1| glycyl-tRNA synthetase beta chain [Dechloromonas aromatica RCB] Length = 712 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 197/739 (26%), Positives = 343/739 (46%), Gaps = 71/739 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K E S L LK G+ ++ Y +P RL ++ + Sbjct: 4 KNLLVELFVEELPPKALKKLGEAFSAALANSLKNAGLAPATASITAYASPRRLAAHVTDV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDC-----QIKKDPKKGD 107 + + +K + ++L P G A+ L G+ + +++ K D Sbjct: 64 AAVAADKPVAQKLMPVAVGLDAAGNATPALLKKLAGLGIDADAAASVVASLRRENDGKAD 123 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILV 167 V + + L+ + A+ +P PK M + S+ +++RP ++ + Sbjct: 124 VLFFDSLAKGATLAEGLQKAIEAALAALPIPKVMTYQLQDG-WSSVNFVRPAHGLVALHG 182 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRR 225 + ++ + + + G T+GHRF A P+ + D Y L + V+ RR Sbjct: 183 GD-----VVPVAVLGLNAGRETHGHRFEATVDPVVFANADEYASKLATDGAVIASFAERR 237 Query: 226 NAILNDAHRLASAVG------LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 I A+ G L ++D+ LL+E+ LVE V +G F++++L +P+E + Sbjct: 238 AEIARQLEGAAAKAGQATGAALRPIDDEALLDEVTALVERPNVLIGQFEQEFLAVPQECL 297 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 LT+K NQK F G L N F++VSNI D +A++ GN RVV RL DA F+ + Sbjct: 298 ILTMKANQKYFPLLDATGKLTNKFLVVSNISPEDA-SAVIGGNERVVRPRLADAKFFFDQ 356 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K L+ R+ + + VV+H K+GTQGER+ R+ + + Sbjct: 357 DRK--------------------KSLESRV--IGLSKVVYHNKLGTQGERMQRVAAIARA 394 Query: 400 IAQLIDADVA--LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 I + + + ++A VL+KADL T++V EFPELQG +G+ YA+ DA+E+ Sbjct: 395 IGESLGGEALALHAEQAAVLAKADLLTDMVGEFPELQGTMGRYYALHDGLAAEIADAVED 454 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H KPR + +P + V+LADKL+TL+ + I + P+G +DP+ALRR LG+IR++ Sbjct: 455 HYKPRFAGDTLPRGIVGTVVALADKLETLVGMFGIGQIPTGDRDPFALRRHALGVIRMLA 514 Query: 518 ENKIDIPLSQFIEDQNL---------------ILFFHDRLKLYLHDRDIRHDLIEAILRP 562 EN + +PL ++ F +DRL L ++ ++A++ Sbjct: 515 ENNLALPLDHLLQTAAAPFASVDGFKAAEAPLADFIYDRLAGSLREQGYTAQEVDAVVSQ 574 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 L I + + F + + KR+ IL +K + + L Sbjct: 575 RPQRLGDIPKRLAAVRAFSGLPESAALAAANKRVGNIL---KKVENAVEAVVDNALLKEA 631 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AE L+ + + + Y + L ++ P++ FFD V+VN +D +R NRL Sbjct: 632 AEIALHDALVEVVPQADAAFVTGDYSESLQALAALRAPVDAFFDDVMVNAEDPALRANRL 691 Query: 683 SLLQYIKNIILIVINVQKI 701 LL + + V ++ K+ Sbjct: 692 GLLAKLHAAMNQVADISKL 710 >gi|254804255|ref|YP_003082476.1| glycyl-tRNA synthetase beta chain [Neisseria meningitidis alpha14] gi|254667797|emb|CBA03763.1| glycyl-tRNA synthetase beta chain [Neisseria meningitidis alpha14] Length = 687 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 210/707 (29%), Positives = 348/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGTAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + +L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAEQMREQGKVEASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEQTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|325133391|gb|EGC56055.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M13399] Length = 687 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 213/707 (30%), Positives = 353/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAELTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNAAVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTADP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L ++VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--VNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVVAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E+ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVDESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|325135523|gb|EGC58141.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M0579] Length = 687 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 210/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAEQMREQGKVEASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|309379539|emb|CBX21905.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 687 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 212/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAELTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAEQMREQGKVEASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLNQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVVAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E+ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVDESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|260222391|emb|CBA31908.1| Glycyl-tRNA synthetase beta subunit [Curvibacter putative symbiont of Hydra magnipapillata] Length = 706 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 207/734 (28%), Positives = 347/734 (47%), Gaps = 65/734 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGL 59 + L+E++ EE+P + K E + +L LK +G++ + + +P RL +++ + Sbjct: 4 KNLLVELFVEELPPKALKKLGEAFATVLADSLKAQGLVAADAAVTHFASPRRLAVHVAAV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 +P + +K + ++L P G A+ L++ G + +K+ K + Sbjct: 64 APQAADKAVSQKLMPVAVGLDASGNATPALLKKLQALGADASAVPALKRAKDGKAEALFY 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW----STTHSPISAFSWIRPLKSILCILV 167 + D L+ + I K+P PK M + ++ S++RP ++ + Sbjct: 124 DSMVKGATLVDGLQKALLETIAKLPIPKVMSYQLQSGCELPGWTSVSFVRPAHGLVALHG 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRR 225 ++ ++ + + GN T GHRF A P+ + D Y L ++ V+ RR Sbjct: 184 SD-----VVPVQALGLQSGNRTEGHRFEAAVSPVVIADADAYAATLAKDGAVIASFAERR 238 Query: 226 NAILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I+ A+ VG + +ED LL+E+ LVE V + F+ ++L +P+E + LT+ Sbjct: 239 AEIVRQLDAAAAQVGGGCKPIEDDALLDEVTALVERPNVLICEFEAQFLEVPQECLILTM 298 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F G L N F++VSNI+ D + ++ GN RVV RL DA F+ +D+ Sbjct: 299 KANQKYFPLLDAAGKLTNKFLVVSNIKPDDA-SFVIGGNERVVRPRLADAKFFFDQDRK- 356 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K L R+ L VV+H K+GTQGERV R+R + K IA Sbjct: 357 -------------------KTLASRVEGLG--KVVYHNKLGTQGERVERVRAIAKAIASQ 395 Query: 404 IDAD--VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 I V D+A L+K DL T++V EFPELQG +G YA+ + AIE+H KP Sbjct: 396 IGDATLVVQADQAAQLAKTDLVTDMVGEFPELQGIMGGYYALNDGLGETVAHAIEDHYKP 455 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P N + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR+++E + Sbjct: 456 RFAGDALPRNTAGLVVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRMLVEKDL 515 Query: 522 DIPLSQFIEDQ-------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + +S ++ L+ F DR L ++ ++A+L L Sbjct: 516 PLDVSALVQSAVPAFGSLITDASVALVDFMFDRFAGSLREKGYSAQEVDAVLALRPQRLG 575 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + F + + + KRI IL KK ++ +S L AEK L+ Sbjct: 576 DVAKRLVAVRAFAALPESPALAAANKRISNIL----KKTDDVDAHVSEVLLQEAAEKALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + Q Y L ++ P++ FF+ V+VN + ++R NRL LL+ + Sbjct: 632 AAMQTVLPQAQGQWQAGDYTASLQSLAALRAPVDAFFEDVMVNAEQMDLRLNRLGLLKSL 691 Query: 689 KNIILIVINVQKIV 702 + V ++ K+ Sbjct: 692 HVAMNRVADLSKLA 705 >gi|325204882|gb|ADZ00336.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240355] Length = 687 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 213/707 (30%), Positives = 352/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIIND-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSGGEIAIENADSYAAQMRGQGKVVASFAERKAAIQTALNEQAGRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F R G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDRNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEQTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V DD V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMADDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|28378607|ref|NP_785499.1| glycine--tRNA ligase, beta chain [Lactobacillus plantarum WCFS1] gi|38258517|sp|Q88VS3|SYGB_LACPL RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28271443|emb|CAD64348.1| glycine--tRNA ligase, beta chain [Lactobacillus plantarum WCFS1] Length = 694 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 197/734 (26%), Positives = 348/734 (47%), Gaps = 74/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +LLEI EE+PA + + L +I LK+ + +++++ + TP RL + + GL Sbjct: 1 MAKTYLLEIGLEEMPAHVVTPSVLQLKERMIKFLKDARLDFEDVKTFSTPRRLTVQVLGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + +E GP G KA GF + G T I KG Y+ V Sbjct: 61 ADKQADVKKEVRGPAKKIAQDADGNWTKAAIGFSKGQGASTDD---IVFKDVKGTPYVFV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +VL + I K+ +P M+WST +F +IRP++ I+ +L Sbjct: 118 QTFTAGKTAAEVLTGGIKDVITKMNFPTMMKWSTY-----SFKYIRPIRWIVSLL----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ + + ++ G ++ GHRF +++ + Y DL V+ D R+ I Sbjct: 168 DDEVVPVQILDVAAGRVSRGHRFLGHD-VEIATAADYEADLASVQVVADAAKRKATIREQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ ++ ++DLLEE+ LVE+ F G FD KYL +P+E++ +++ +Q+ F Sbjct: 227 IAALANERDWQIKVNEDLLEEVNNLVEYPTAFAGDFDTKYLTIPDEVLITSMRDHQRFFY 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 E L F+ V N D + GN +V+ ARLEDA F+ DQ + Sbjct: 287 VTDAEDNLLPHFVSVRNGNT-DHLENVALGNQKVLTARLEDAAFFYHEDQQH-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 + + + RL V FH KIGT E++ R+ ++ +A + Sbjct: 338 ------------SIQEYVERLK--KVSFHDKIGTMYEKMQRVMIISDFLADRFGLTETEK 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + RA + K DL T +V EFPELQG +G +YAVL+ E+ + AI EH P ++ Sbjct: 384 NQLHRAAQIYKFDLVTGMVGEFPELQGVMGDKYAVLKGEDPAVGQAIREHYMPISADGDL 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P +K+ +++ADK+D++ +F+A+ PSGS DP+ALRR GI+RI+ E D P+ Q Sbjct: 444 PKSKVGAVLAIADKVDSITSFFAVGLTPSGSNDPFALRRQAFGIVRIVREQGWDFPIRQL 503 Query: 529 --------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + + F DR+K + ++R IR+D+++ +++ ++ Sbjct: 504 EADIQKELVAHDATYNLDFEKQTAPVADFLTDRVKQWFNNRKIRYDIVDTVIKGSRQDIR 563 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + LN + + + + R+ +I A + +++ + P EAE+ LY Sbjct: 564 EMFKAADVLNAHQDDPQFKDTIEAFTRLLRITAKAKLAADDLT--VDPSLFENEAEQHLY 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + +M + L ++ I +F+Q +V D +VRDN L L I Sbjct: 622 DAVLELQKQFTPAMSMED---RFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLLTI 678 Query: 689 KNIILIVINVQKIV 702 +I ++ ++ +++ Sbjct: 679 AQMINVMGDLNQLI 692 >gi|256828796|ref|YP_003157524.1| glycyl-tRNA synthetase subunit beta [Desulfomicrobium baculatum DSM 4028] gi|256577972|gb|ACU89108.1| glycyl-tRNA synthetase, beta subunit [Desulfomicrobium baculatum DSM 4028] Length = 693 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 212/727 (29%), Positives = 338/727 (46%), Gaps = 64/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI EE+PAR +L+ LL E G+ Y + TP RL + + GLS Sbjct: 1 MRHFVLEIGVEEMPARFLPLLDRELADRFSALLSEAGLAYGRVATASTPRRLVVDITGLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + GP G KA GF +S ++ K D KG+ Sbjct: 61 AVQKTEEIVVSGPPARIAFDADGNPTKAGLGFAKSQNVEFDQIYVEKTD--KGEYLALKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R ++L + + +PK M+W ++ RP++ IL +L + Sbjct: 119 TVGGRTAGEILAETCMAILPNLTFPKKMQWMGKEC-----TFGRPVRWILAML-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 +I+ + N T GHR P P V D Y R L ++ V+L R+ AI + Sbjct: 169 QIVPFAFAGLTASNQTRGHRVMGPGPFTVPHADEYARILNDQGKVILHAADRKQAIRAEG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 RLA+ +G + + LL+++ LVE + +G F +K+L LP E++ +++T+QK F Sbjct: 229 DRLAAEMGGSVEWLESLLDQVANLVETPRAMLGGFHEKFLELPAEVLLTSMETHQKSFGL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L F+ +NI++ + A + +G RV+ ARLEDA FW+ D Sbjct: 289 RGADGKLLPYFLTAANIESREP-ALVRKGWERVLRARLEDARFFWEAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALV 411 + D + +LD V+F +GT G++ R+ L IA + ++ + Sbjct: 336 --------CAATFDHWLDKLD--KVIFIGPLGTMGDKTRRLEKLAAFIASRVAPELGESM 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL +E+V EF +LQGK+G YA Q E+ + +A+ E P G +P++ Sbjct: 386 RRAGRLSKADLVSEMVYEFDDLQGKMGGIYARRQGESQTVAEALYEQYLPAGQDSPLPSS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 K +SLADKLD L + + P+G+ DPYALRR LG+ RIILE + + + Sbjct: 446 KAGAILSLADKLDNLAGCFGLGMMPTGAADPYALRRNALGVCRIILEMGLQVDIEVLLRE 505 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L+ FF RL+ Y + + I +IEA + P ++ Sbjct: 506 AQKGYAGVTWKFGEDEALEKLMDFFGQRLRAYWNGQGIPTLVIEAAMAPGFTDIHDTWLR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L EF E +L+ KR I I ++ ++++S + L ++AEK +A + Sbjct: 566 VRALAEFSREDDFEASVLTFKRAANI--IRKQADQDLSGAVREDLLEVDAEKSFWATLQG 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 E Y Q+ L + ++ FFD V+V DD +R NRL+LL + N + Sbjct: 624 IEPVWAELAATADYAQMLSRLRVLRPAVDGFFDGVMVMCDDLALRTNRLNLLYRLVNTLG 683 Query: 694 IVINVQK 700 V + K Sbjct: 684 RVADFGK 690 >gi|332975857|gb|EGK12735.1| glycyl-tRNA synthetase beta subunit [Desmospora sp. 8437] Length = 696 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 192/730 (26%), Positives = 341/730 (46%), Gaps = 71/730 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 ++L+EI EEIPAR + L L L+E + + + Y TP RL + ++ ++ Sbjct: 5 NWLVEIGCEEIPARFVESGVQQLREKLTRWLEENRLSFGKVHTYATPRRLAVLVENVADA 64 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G+ KA +GF R G+ Q+++ K A + Sbjct: 65 QADVEEEVRGPAKRIAVAEDGSWTKAAEGFARKQGISP-DQLQLRE-YKGETYVFAHKHQ 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + ++ + +PK+MRW + +IRP++ ++C+ E++ Sbjct: 123 EGKRTATLIGEELANVLKGLHFPKAMRWGDRRT-----RFIRPVRWLVCLF-----GEEV 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + GN T+GHRF ++ Y+ L + V+++ E RR I HR+ Sbjct: 173 VPVKWAGVTGGNRTFGHRFLG-GETEIGQPADYVETLHDQKVMVEMEARREEIRQQLHRM 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G + D++LL+E+ LVE GSFD+++L LPE ++ T++ +Q+ F R R Sbjct: 232 EEQNGWRIPVDEELLDEVTQLVELPTALSGSFDERFLELPEAVLITTMREHQRYFPVRDR 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L F+ V N + +GN +V++ARL DA F++ D Sbjct: 292 DHHLLPHFVTVRNGDNR-ALEQVAKGNEKVLSARLADARFFYEED--------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 L + +A+LD VV+ +G+ G++ RIR L +++A + + + + Sbjct: 336 -----LKLSISTAVAKLD--QVVYLEGLGSVGDQARRIRKLVEELADQLGLENPERSRLF 388 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EFPEL G +G+EYA E+ AI EH PR + +P + Sbjct: 389 RAADICKFDLSTHMVDEFPELSGVMGEEYARRAGEDPEVARAIMEHHYPRFAGDRLPEGR 448 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI---------DI 523 + +SLADK+D ++ +++ +P+GS+DPY LRR ++ I+++ D+ Sbjct: 449 LGSLISLADKMDAVVAAFSLGIQPTGSQDPYGLRRKASAVVHILMDRGWSRLPLSLLIDL 508 Query: 524 PLSQFIED-----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L++ D + + FFH RLK L ++ IR+DLI+A+L + + +++ Sbjct: 509 SLNRLQADGWLQRDREQVKEEISAFFHLRLKGALQEKGIRYDLIDAVLLSDLSSPQLMLE 568 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + L + + + + R + A + L+++ L + AE+ LYA I Sbjct: 569 KARVLTDAVAREDFKMIVEGFSRASNLAAKGGSE-----LQVNRDLLEVWAERELYASIR 623 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + + + + I FFD VLV +D R NRL+LL+ + Sbjct: 624 SASEDFSAAEKRQDAEGMFAAIAKLAPAIHRFFDDVLVMAEDETTRTNRLALLRETDRLT 683 Query: 693 LIVINVQKIV 702 KIV Sbjct: 684 KRFAAFNKIV 693 >gi|260575527|ref|ZP_05843525.1| glycyl-tRNA synthetase, beta subunit [Rhodobacter sp. SW2] gi|259022170|gb|EEW25468.1| glycyl-tRNA synthetase, beta subunit [Rhodobacter sp. SW2] Length = 746 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 253/774 (32%), Positives = 384/774 (49%), Gaps = 103/774 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AA DL ++ L E G+ Y + TP RL L L+GL+ Sbjct: 1 MPDLLIELFSEEIPARMQARAAADLKKLVTDGLVEAGLTYAGAGAFSTPRRLVLSLEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HS EER GP A + A+ GFLRSTGL +D KKG V+ AV+ KP R Sbjct: 61 AHSQALREERKGPAATAPEAALQGFLRSTGLAREQLEL--RDDKKGQVWFAVIEKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ ++ I+ PWPKSMRW T + W+RPL SILC+L ++ +++ L + Sbjct: 119 AAIVAEVLEATIRNFPWPKSMRWGTG-----SLRWVRPLHSILCLL-TDEHGPQVVPLSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G T GHRF +P V D Y L+ A V+LDP R I +DA A A G Sbjct: 173 DHLNAGATTEGHRFMSPGRFAVTGFDDYAAKLKRAHVILDPAAREAQIWHDATTQAFARG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V +G+ +L LP E+++ +++T+QK F + + Sbjct: 233 LEVVPDAGLLAEVAGLVEWPVVLLGAIAPGFLDLPPEVLQTSMRTHQKFFSVKNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I+ GN++V++ARL DA FW+ D + + +A Sbjct: 293 EGFVTVANRETADHGATILAGNNKVLSARLSDAKFFWENDLRTVHAVGMEGMAA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + V FH K+G+Q +RV+RI L ++IA L+ A L A + KA Sbjct: 347 ------------GLAHVTFHNKLGSQADRVARIEALAREIAPLVGAAPDLAAEAARICKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G+ YA + +A E H KP G ++VPT+ +S+ V+LA Sbjct: 395 DLQSAMVAEFPELQGLMGRYYATAAGHDDGVPEACEMHWKPLGAADDVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + L + + FH Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLGNGVRASLIKAMNTGEKGHIFH- 513 Query: 541 RLKLYLHDRDIRHDLIEA-------------------------ILRPENDN--------- 566 R+ + ++ D+++A +L + + Sbjct: 514 RVAVKEREK---QDVLDALEVNVGAREEITTIRRTATVETGTRVLVSGSFDDGTALHAST 570 Query: 567 -----LLTIVDLIK-----------HLNEFFSSAKGEKFLLSAKRIFQILA--------- 601 L D +K ++ + + L KR + A Sbjct: 571 QVLDLLAFFHDRLKVFLKDQGIRHDVIDACLAMPGNDDLTLLVKRAQSLAAFLKTEDGPN 630 Query: 602 --------------IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 E K E S P++ + E+ L+ + + +M + + Sbjct: 631 LLQGFKRANALLSQAEAKDGVEYSYGADPKFAETDEERALFTALDQAEAVLTPAMKTEDF 690 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ P++ FF+ V VN D+ R NRL+LL I+++ V ++ KI Sbjct: 691 AAAMAAMATLRAPVDAFFEAVQVNSDNPITRRNRLNLLHRIRSLCAQVADLTKI 744 >gi|260460347|ref|ZP_05808599.1| glycyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] gi|259033992|gb|EEW35251.1| glycyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] Length = 792 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 287/527 (54%), Positives = 373/527 (70%), Gaps = 2/527 (0%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE+ SEEIPARMQ KAA DL +L L E G+ Y+ R+YWTP RL L ++GL+ Sbjct: 1 MPDLLLELRSEEIPARMQRKAAGDLKKMLTDGLVEAGLTYEAAREYWTPRRLTLDVRGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 S + EE GP A ++A+ GFLR GL +I++ + DPKKGD Y+A + KP R Sbjct: 61 ARSKDISEEIKGPSTTAPEQAVQGFLRKAGLSSIAEAHVHSDPKKGDFYVAHISKPGRAA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 E ++ +VP I+ PWPKSMRW + + W+RPL+SILC E + ++D ++ Sbjct: 121 EQIIAELVPGIIRNFPWPKSMRWGPASAKPGSLRWVRPLQSILCTFGPETEEPVVVDFEI 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N+TYGHRF AP I V+ D Y+ LE A V+LD + R+ IL DA LA A G Sbjct: 181 DGIRSCNVTYGHRFLAPGEITVRRFDDYVSKLEAAKVVLDADRRKEIILADARNLAFANG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV-- 298 L+LVED+ LLEE+ GLVEW V MG F++ +L +P E+IRLTI+ NQKCFVTR + Sbjct: 241 LDLVEDEGLLEEVSGLVEWPVVLMGEFEEAFLAIPAEVIRLTIRANQKCFVTRPQGEGET 300 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L+N FIL +NI+A+DGG I GN +VV ARL DAL+FW DQ +LP+L L+ SA KF Sbjct: 301 LSNRFILTANIEATDGGKEIAHGNGKVVRARLSDALYFWTTDQGDLPDLGQLEASAEKFG 360 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 LDL KPLDQRMARLD LDV FHAK+GTQGER RI+ L +++A ++ AD AL RA +L+ Sbjct: 361 LDLKKPLDQRMARLDHLDVTFHAKLGTQGERAERIKRLAEQLAPIVGADPALASRAAILA 420 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL TE+V EFPELQG +G++YA+LQ E+ S AIEEH KP+GP + VP++ +S+TV+ Sbjct: 421 KADLTTEVVGEFPELQGAMGRKYALLQGEHPSVAAAIEEHYKPQGPSDYVPSDPVSVTVA 480 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 LADKLDTL+ FWAI+EKP+GSKDPYALRRA LG++R+ILENK+ + L Sbjct: 481 LADKLDTLVGFWAIDEKPTGSKDPYALRRAALGMVRVILENKLKLSL 527 Score = 213 bits (544), Expect = 6e-53, Method: Composition-based stats. Identities = 63/171 (36%), Positives = 98/171 (57%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 +L+ FFHDRLK+YL D+ RHDLI+A++ P +D+LL IV ++ L F + G+ L Sbjct: 621 ADLLSFFHDRLKVYLRDQGARHDLIDAVITPRSDDLLQIVRRVEALGSFLDTEDGKNLLA 680 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 KR ILA EEKK I+ + P +AE L+A ++ E++ ++ + Sbjct: 681 GTKRAANILAAEEKKKTAIAQTVEPALFRQDAENSLFAAVNQAEKQAGEAIQNEDFSAAM 740 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ EP++ FF+ VLVN ++ VR NRL+LL I++ V + KI Sbjct: 741 LALSALREPVDSFFEHVLVNDENLAVRANRLALLARIRSATGQVADFSKIA 791 >gi|325131653|gb|EGC54359.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M6190] gi|325137516|gb|EGC60099.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis ES14902] Length = 686 Score = 695 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 207/707 (29%), Positives = 348/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 15 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 75 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 133 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 183 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 342 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 520 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 579 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 635 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 681 >gi|325207412|gb|ADZ02864.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis NZ-05/33] Length = 687 Score = 695 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 210/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIAGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|186475174|ref|YP_001856644.1| glycyl-tRNA synthetase subunit beta [Burkholderia phymatum STM815] gi|184191633|gb|ACC69598.1| glycyl-tRNA synthetase, beta subunit [Burkholderia phymatum STM815] Length = 699 Score = 695 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 209/715 (29%), Positives = 343/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I ++ Y TP RL + LK + +PEK + E+ Sbjct: 19 PPKALARLGDAFAESIAQRLAARDLIEGELQFERYATPRRLAVTLKNVRNVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ + K + + P + + Sbjct: 79 VLPVSVALDANGQPTPPLAKKLAALGFPDFSVNDLERANDGKAEAFFLRYAAPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--SNVQFVRPVHRLTVL-----HDKEIVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 + T GHRF + +++Q DHY L + V+ + R+ AI H LA A G + Sbjct: 192 DADDTTLGHRFLSEGFVQIQHADHYAETLVHKGKVVPNFADRKEAIRT--HLLAQANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYACEFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 +PL R+ +L +VV+H K+G+ +RV R+ L IA +I ADVAL R LSKADL Sbjct: 349 RPLADRVPQL--ANVVYHNKLGSALQRVERVEALAGAIAAMIGADVALAKRGAHLSKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P+ V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPSTATGTVVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------------- 528 L+TL+ W I +P+G KDP+ALRR LG++RI++E ++ I L + Sbjct: 467 LETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPIDLVELLRAANAQFTNVPNV 526 Query: 529 -IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 Q + F DRL+ L +R ++A+L IV ++ + EF + A+ Sbjct: 527 TDSTQAIYEFCIDRLRGQLRERGYSAGEVDAVLALNPTRFDDIVARLEAVREFAALAEAA 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL E + + L+ AEK L+A + +Q + Y Sbjct: 587 SLAAANKRISNILKKSEAASAN---GVQITLLIEAAEKALHAQLEQVAPRVQSQLAEGEY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 TGALSALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRLA 698 >gi|261393260|emb|CAX50886.1| glycyl-tRNA synthetase beta chain (glycine--tRNA ligase beta chain; GlyRS) [Neisseria meningitidis 8013] Length = 687 Score = 695 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 211/707 (29%), Positives = 351/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI R A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAAQMREQGKVVAPFAERKAAIQTALERQARRLNAAVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELGE----VNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|298528170|ref|ZP_07015574.1| glycyl-tRNA synthetase, beta subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511822|gb|EFI35724.1| glycyl-tRNA synthetase, beta subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 695 Score = 695 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 208/729 (28%), Positives = 342/729 (46%), Gaps = 64/729 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPDF+LEI EE+PAR + D L L+ + + + +R + TP RL Y+ GLS Sbjct: 1 MPDFVLEIGFEEMPARFLKQITIDFRQSLDKELETQMLDHGQVRTWSTPRRLCAYVSGLS 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 K E GP V G KA GF RS + + + I++ KG Sbjct: 61 EVQTSKEEIVTGPPVAVGLDEQGGYTKAGQGFARSQQVD-VQELMIQETE-KGRYLAVQK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + D+L I A+ + +PK MRW F++ RP++ IL E Sbjct: 119 KVGGAQTRDILPQICTEAVNSLGFPKKMRW------WDRFTFGRPIRWILA-----KMDE 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 ++I+ + ++ ++TYGHR P P +V Y R + EEA V+LD + R++ I ++A Sbjct: 168 QVINFQIADVKSADMTYGHRVLGPGPFRVDQAKDYFRIIREEAGVILDFQERKDIITSEA 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + ++VE++ L E L E+ +GSFD YL LP E++ +++++QK F Sbjct: 228 SNLAREIQGKVVENEKLASENANLAEFPGPVLGSFDPGYLELPREVLLTSMESHQKSFGV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L F+ V N + D I +G RV+ ARLEDA FW D+ Sbjct: 288 VDDEDRLLPSFVAVINNRP-DSRGLIRKGWERVLKARLEDARFFWNSDK----------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 + D+ M +L+ VVF A +G+ GE+ R+ + + + AD V Sbjct: 336 ---------AASFDEWMQKLE--KVVFMAPLGSMGEKSRRLERISGFLCDRLQSADKKDV 384 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A + KADL +E+V EF +LQG +G YA N + A+ EH P GP + P+ Sbjct: 385 QKAAFICKADLVSEMVGEFADLQGIMGGIYASHAGYNDNVARAVYEHYLPLGPDSDTPST 444 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--- 528 VSLADK+D L+ + ++ P+G+ DPYALRR LG+IRII+++ + + + + Sbjct: 445 PEGALVSLADKMDNLVGCFGLDMLPTGAADPYALRRQALGVIRIIIKHGLRLDIEELISF 504 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + L+ FF RLK Y + + L++A+L+ ++ Sbjct: 505 TAKSYTGATWKQDPEQALEKLMQFFATRLKAYWQGQGFQGKLVDAVLQSGFSDIYAAQGR 564 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAI-EEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + + EF E +L+ KR+ I+ + + P L + E +L I Sbjct: 565 LDAIREFSLDENFEAAVLTYKRVDNIIRKQAGDAGVSLKQDYDPGLLQEDPEIKLDRAIR 624 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + ++ + + + L+++ ++ FFD V+V D ++R NRL LL ++ Sbjct: 625 EIMNDWDTLWQNEDFSSLFNKLNALRPSVDDFFDHVMVMCQDEKLRQNRLGLLNFLSLKF 684 Query: 693 LIVINVQKI 701 + + + Sbjct: 685 KKLADFSAL 693 >gi|261378163|ref|ZP_05982736.1| glycyl-tRNA synthetase, beta subunit [Neisseria cinerea ATCC 14685] gi|269145627|gb|EEZ72045.1| glycyl-tRNA synthetase, beta subunit [Neisseria cinerea ATCC 14685] Length = 687 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 217/707 (30%), Positives = 351/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKVQLIAGVAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ S++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHSLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI + A + + Sbjct: 184 GNKTLGHRFLSNGEIAIENADSYAAQMREQGKVEALFAERKAAIQTALNEQAGRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A DRA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAADRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAKAIEQHYQPRFAGDNLPDGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTSFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELGE----VNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAEQMNAVADI 682 >gi|296313940|ref|ZP_06863881.1| glycyl-tRNA synthetase, beta subunit [Neisseria polysaccharea ATCC 43768] gi|296839480|gb|EFH23418.1| glycyl-tRNA synthetase, beta subunit [Neisseria polysaccharea ATCC 43768] Length = 687 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 213/707 (30%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGVPTKALEGFARGAGAK-IEDLTIIHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHRLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEITIENADSYAEQMREQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 L+ W I P+G KDPYALRRA+LGI+R++++ +D+ L Sbjct: 461 ILVGIWGIGLIPTGDKDPYALRRASLGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 S KR+ +L KK E+ L + EK L+A I ++ + Sbjct: 580 SNKRVQNLL----KKADAALGEVDESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|47095409|ref|ZP_00233019.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|254898376|ref|ZP_05258300.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes J0161] gi|254912132|ref|ZP_05262144.1| glycyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936460|ref|ZP_05268157.1| glycyl-tRNA synthetase [Listeria monocytogenes F6900] gi|47016230|gb|EAL07153.1| glycyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|258609052|gb|EEW21660.1| glycyl-tRNA synthetase [Listeria monocytogenes F6900] gi|293590103|gb|EFF98437.1| glycyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 688 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 201/732 (27%), Positives = 343/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEAM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEESKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD---LTFRDIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 167 GEEIIPFEITGVATSNTSRGHRFLGKSA-TIKQPSDYPNALLEQFVVVNAEERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++E L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQEDELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 ---------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYED-----GVEVDPALFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|227510291|ref|ZP_03940340.1| glycine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189943|gb|EEI70010.1| glycine--tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 693 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 340/733 (46%), Gaps = 74/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI EEIPA + + L LK++ + + ++ + TP RL LY+ GL Sbjct: 1 MANNFLLEIGLEEIPAHVVTPSINQLKKRASDYLKDQRITFDQIKTFSTPRRLTLYITGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ + GP G KA GF R G T I KG Y+ V Sbjct: 61 ADKQPDIDKSVKGPAKKIAQDTDGNWTKAAIGFSRGQGATTDD---ITFKEVKGTDYVFV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D + T + I + +P M+W+ +F ++RP+K ++ +L Sbjct: 118 EKHIAGKSVDEVLTGMKDVITAMTFPTMMKWANY-----SFEYVRPIKWLVALL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I + ++ +T GHRF +++ + D Y L + V+ D + R+ I+ Sbjct: 168 DKVIPFSILDVSTDRVTSGHRFLGKD-VELANADEYEEKLTQQFVIADAKKRKELIVKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H++A ++ D DLLEE+ LVEW F G F+ KYL +P+E++ ++K +Q+ F Sbjct: 227 HKIAEDNDWQINLDPDLLEEVNNLVEWPTAFAGKFNDKYLKIPDEVLITSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L FI V N D ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 287 TNGDGTLLPHFISVRNGNDYD-IQNVIAGNEKVLTARLEDAMFFYEEDQK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 K + + + RL V FH KI T E++ R++V+ + + ++ Sbjct: 336 ----------KTIAEDVERLK--KVSFHDKISTMFEKMQRVQVISNYLGKQFGFSDKELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 384 DEQRAAEIYKFDLVTGMVGEFAELQGVMGEKYALLNGEAPAVAKAISEHYMPISANGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + + ++++DKLD+++ F+A PSGS DPYALRR GI+RI+ + + Sbjct: 444 ASNVGALLAVSDKLDSILTFFAAGMIPSGSNDPYALRRQATGIVRIVADKNWNFDLIDTL 503 Query: 525 ---------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 L Q + + F DR+K YL D IR+D+ +A+ ++L Sbjct: 504 KAIINLQDKKQVAPKLDQAGQITAVSDFIKDRIKQYLDDLGIRYDISDAVTSGSQTDILF 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L E + + S R+ +I K+ + L + E+EK L Sbjct: 564 NISSGQVLQEQKDDDAFKSIIESLTRVLRISKKGHFKDND--LVVDGSLFENESEKVLNQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ E + + D L + + I +FD +V D ++RDN L L + Sbjct: 622 KVASAAEGYYEISAKEDF----DRLSGLKDAINAYFDATMVMDKDEKLRDNHLRQLTLLS 677 Query: 690 NIILIVINVQKIV 702 ++IL + ++ K+V Sbjct: 678 HLILHLGDLDKLV 690 >gi|241662033|ref|YP_002980393.1| glycyl-tRNA synthetase subunit beta [Ralstonia pickettii 12D] gi|240864060|gb|ACS61721.1| glycyl-tRNA synthetase, beta subunit [Ralstonia pickettii 12D] Length = 697 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 211/719 (29%), Positives = 350/719 (48%), Gaps = 66/719 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFARGLFDGLSAQGLLEEGAAVEGFATPRRLAASITGVRRTAPDRELREK 73 Query: 71 LGPRVGA----GKKAI------DGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P A GK A ++ G++ I+ +++ P K + L Sbjct: 74 VLPVTIAFDAEGKPAAPLVKKLAALAKTVGVEAIAPESLERAPDGKAEALFYRYTARGAL 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+T + + +P PK M + + ++RP ++ +L +E +I + Sbjct: 134 LADGLQTALSQTVANLPIPKVMTYQRPNGE--NVQFVRPAHKLIALLDSE-----VIPVS 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + GN+T GHRF + I +Q Y LE + V+ R+ AI + + A A Sbjct: 187 AFGLQSGNVTLGHRFLSAGEIVIQDAASYASTLESQGKVIAGYGKRKEAIRAELLKTAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ F++ +L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVVYPCHFEEAFLAVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSNI A+D AI+QGN RVV RL DA F+++D+ Sbjct: 305 LRNRFLIVSNI-ATDTPEAIIQGNERVVRPRLADARFFFEQDKK---------------- 347 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ L VV+H KIGTQ ERVSR++ + ++A+ + ADVA R +L+ Sbjct: 348 ----KPLADRVPLLSR--VVYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRGALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P+ V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEPDDVALACSEHYQPRFAGDALPSTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADK +TL+ W I +P+G KDP+ALRR LGI+R+++E + + + ++ Sbjct: 462 LADKFETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEKPLALTIDDALQIAAASFDG 521 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPNLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + P L +AE+ L+ + + ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDVAIGAVQPPLLKEDAERALHQSVVAAEPQVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDTFFDGVMVMADDTALRDNRLALLAELHGLMNRVADISKLA 696 >gi|297717826|gb|ADI50056.1| glycyl-tRNA synthetase beta chain [Candidatus Odyssella thessalonicensis L13] Length = 674 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 237/723 (32%), Positives = 363/723 (50%), Gaps = 73/723 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FL EI SEEIPARMQ KAAED L+E G+ ++ + Y TP RL + GL Sbjct: 1 MSQEFLFEILSEEIPARMQVKAAEDFKAAFETGLREAGLSFEAVTTYITPRRLVATISGL 60 Query: 60 SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 + + EER GPR+ A + A+ GFL+S+G Q K + A L + Sbjct: 61 ASATQATTEERRGPRLEAPEAALQGFLKSSGQTKEQLIQ------KDGYWYANLITEAKP 114 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 +L I I+ WPKSMRW + +W+RP++ IL +L + ++ + + Sbjct: 115 TSCILPDICRQIIRSFSWPKSMRW-----HGAPHTWVRPVRGILAVLAGKPLIFEVPEFN 169 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + N T GHRF A +V Y +LE+ V+L E R+ ILN L Sbjct: 170 ---LVSSNKTKGHRFLASGEFEVTCFSDYQHNLEKNFVILSHEQRQKLILNKLIELGQQQ 226 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G L D+ LLEE+ GL E+ Q +G + +L LP++++ +++ +QK F G + Sbjct: 227 GYSLEHDEKLLEEVAGLSEYPQPLVGKIEGSFLRLPKKVLSTSMRVHQKYFTFTDSLGNI 286 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A F LV+N ASD G +++G RV+ ARL DA F+ +D Sbjct: 287 APIFGLVANTVASDNGTTMLRGYERVLRARLSDASFFYDQD------------------- 327 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L PL + +LD ++FH K+G+ G+RV R+ L A RA L K Sbjct: 328 -LKTPLQAYLPQLD--SIIFHTKLGSLGQRVQRLMNLVSSTA---------AKRAAELCK 375 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EFPELQG +G YA Q E +AI +H +P GP + P N ++ ++L Sbjct: 376 CDLVTSMVGEFPELQGYMGGVYAQAQQETAEIAEAITQHYQPVGPQDASPHNPAAMELAL 435 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID----------------- 522 A+KLDTL+ F+AI E P+GSKDPYALRRA LGIIRI+ +N + Sbjct: 436 AEKLDTLVGFFAIGELPTGSKDPYALRRAALGIIRIVRDNNLQDWRLLDKITQALSAYQA 495 Query: 523 --IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAIL--RPENDNLLTIVDLIKHLN 578 + +++ ++ F +RL L +R D + A+L DN+ IV+ IK LN Sbjct: 496 QGLQINERFSAPAVLDFIMERLGHSLKAEGLRPDTLAAVLQSANRGDNICGIVERIKALN 555 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 E+ +S G + +R + IL +L++ PQ EK L+ + + Sbjct: 556 EYLTSEAGYALRAAFRRAYGILPK-----DHEALKVQPQLFTEHEEKALFEELETVNSRC 610 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Q +++ Y ++ +L + +PI+ FF + +N ++ +R+NRL+LLQ + + I+ + Sbjct: 611 QSLLENHDYTRLMMILAHLRDPIDAFF-NLKINDENDMIRNNRLALLQLMIHQTAIIADF 669 Query: 699 QKI 701 K+ Sbjct: 670 SKL 672 >gi|225182111|ref|ZP_03735539.1| glycyl-tRNA synthetase, beta subunit [Dethiobacter alkaliphilus AHT 1] gi|225167198|gb|EEG76021.1| glycyl-tRNA synthetase, beta subunit [Dethiobacter alkaliphilus AHT 1] Length = 695 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 202/727 (27%), Positives = 340/727 (46%), Gaps = 67/727 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 LLEI EEIPAR A E L L E + + + TP RL L + L+ Sbjct: 5 TLLLEIGMEEIPARFMEPALEQLEKNARAALTEARLSFGTVSTLGTPRRLTLLVADLADK 64 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E++ GP G KA GF RS G+ D ++ + AV + Sbjct: 65 QADLSEKKKGPAKKAAFDAEGNPTKAAMGFARSQGVSV--DELFTEEISSVEYVFAVKNE 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 +L + I+++ +PK M W + + RP++ + + ++ Sbjct: 123 AGGETLAILPELCTRLIRELSFPKPMFWFSKE-----IRFARPIRWLAALYGEQE----- 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G TYGHRF + P+ + + Y+ +EE V++DP R I+ + Sbjct: 173 VPFSFAGLTAGRTTYGHRFLSEGPLVLPNASAYLSAMEENSVVVDPAERSKLIVAQVEQA 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+A+G D+DLLEE++ LVE+ + +G+F ++L +P+E++ ++ +Q+ F Sbjct: 233 AAALGGRSEVDQDLLEEVVNLVEYPKAVVGNFAAEFLEVPQEVLITAMRAHQRYFPVFDE 292 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 VL FI +SN + + GN RV+ ARL DA F++ D+ Sbjct: 293 NDVLLPHFITISNGTRDEYLDNVRAGNERVLRARLADARFFFEEDRK------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---ALVD 412 KPL + LD D+VF +GT ++ R++ L +++A D Sbjct: 340 -------KPLADFVTMLD--DIVFMEPLGTMRKKTERLKSLAEELAAEAGYDQSTREAAS 390 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R LSKADL T +V EFPELQG +G YA L E+ A+EEH PR ++ + Sbjct: 391 RGAYLSKADLMTHMVYEFPELQGTMGMHYARLSGESEDVSRAVEEHYAPRFAGDSPAKSA 450 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 V++ADK+DTL + + PSGS+DPYALRR+ LG++ +LE+++ + L++ Sbjct: 451 AGAMVAIADKMDTLAACFGLGLIPSGSQDPYALRRSALGVVATMLEHQLTMSLNRLCALA 510 Query: 533 -----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + F R++ ++ +R+D+I+A L E D+L I+ + Sbjct: 511 LEGLTQDITRPAAEVVGEMEEFLWQRVRFLFAEKGLRYDVIDASLGAEADDLPGILARAE 570 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + + + L R + +++N +S + L+ AEK L+ + Sbjct: 571 ILQSKLDTPELTRILTPFTRAANLTRDVQEQN------VSVESLVEPAEKELFQAAGEAK 624 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + + + L + PI+ FF+ V+V V+D V+ NRL+LLQY+K + L + Sbjct: 625 DVVDNAAARGDFAAVFAALSPLYAPIDRFFNDVMVMVEDEAVKLNRLALLQYVKALFLHL 684 Query: 696 INVQKIV 702 ++ KIV Sbjct: 685 GDLSKIV 691 >gi|187927503|ref|YP_001897990.1| glycyl-tRNA synthetase subunit beta [Ralstonia pickettii 12J] gi|309779795|ref|ZP_07674550.1| glycyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] gi|238691845|sp|B2UFN5|SYGB_RALPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|187724393|gb|ACD25558.1| glycyl-tRNA synthetase, beta subunit [Ralstonia pickettii 12J] gi|308921372|gb|EFP67014.1| glycyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 697 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 212/719 (29%), Positives = 350/719 (48%), Gaps = 66/719 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G +P++ E+ Sbjct: 14 PPKALARLGEAFARGLFDGLSAQGLLEEGAAVEGFATPRRLAASITGARRTAPDRELREK 73 Query: 71 LGPRVGA----GKKAI------DGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P A GK A ++ G++ I+ +++ P K + + Sbjct: 74 VLPVTIAFDAEGKPAAPLVKKLAALAKTVGVEVIAAESLERGPDGKAEALFYRYTARGAV 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+T + I +P PK M + + ++RP ++ +L +E +I + Sbjct: 134 LADGLQTALSQTIANLPIPKVMTYQRPNGE--NVQFVRPAHKLIALLDSE-----VIPVS 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + GN+T GHRF + I +Q Y LE + V+ R+ AI + + A A Sbjct: 187 AFGLQSGNVTLGHRFLSAGEIVIQDAASYASTLESQGKVIAGYGKRKEAIRAELLKTAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ F++ +L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVVYPCHFEEAFLAVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSNI A+D AI+QGN RVV RL DA F+++D+ Sbjct: 305 LRNRFLIVSNI-ATDTPEAIIQGNERVVRPRLADARFFFEQDKK---------------- 347 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ L VV+H KIGTQ ERVSR++ + ++A+ + ADVA R +L+ Sbjct: 348 ----KPLADRVPLLSR--VVYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRGALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P+ V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEPDDVALACSEHYQPRFAGDALPSTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E + + + ++ Sbjct: 462 LADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEKPLALTIDDALQIAAASFDG 521 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPNLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + P L +AE+ L+ + + ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDVAIGAVQPPLLKEDAERALHQSVVSAEPQVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDTFFDGVMVMADDTALRDNRLALLAELHGLMNRVADISKLA 696 >gi|15677760|ref|NP_274924.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis MC58] gi|25009341|sp|Q9JXQ5|SYGB_NEIMB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|7227187|gb|AAF42259.1| glycyl-tRNA synthetase, beta chain [Neisseria meningitidis MC58] gi|316985552|gb|EFV64499.1| glycyl-tRNA synthetase beta subunit [Neisseria meningitidis H44/76] Length = 687 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 212/707 (29%), Positives = 348/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + +L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQIGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + Sbjct: 184 GNKTLGHRFLSDGEITIENADSYAAQMREQGKVVASFAERKAAIQTVLEGQARRLNATAA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--TNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEITEAVEQHYQPRFAGDNLPEGKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFNSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|284051092|ref|ZP_06381302.1| glycyl-tRNA synthetase subunit beta [Arthrospira platensis str. Paraca] gi|291571664|dbj|BAI93936.1| glycyl-tRNA synthetase beta chain [Arthrospira platensis NIES-39] Length = 713 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 207/717 (28%), Positives = 347/717 (48%), Gaps = 71/717 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A ++ LKE+ + ++++ Y TP RL + + GL Sbjct: 1 MPSFLLEVGTEELPATFVEGAIAQWEAMIPASLKEQYLTCESVKVYATPRRLAVVIAGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G KA +GF + ++ + D +I+ P KGD + Sbjct: 61 EQQPDRQEEIKGPPATAAFKEGKPTKAAEGFAKKQNIK-LEDIEIRPTP-KGDFVFVLKH 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R +++ ++ I ++ + MRW + RP++ ++ +L E Sbjct: 119 IPGRKTAEIVTELIRQWINRLEGKRFMRWGDGD-----IRFPRPIRWLVTLLDKEILPLS 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHR P+ + + Y L +A V +DP+ R+ AI N Sbjct: 174 -IPNGSETISSDRHSQGHRVLHPNSVSIAEATEYAETLGKAFVEVDPQTRKTAIANQVKV 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++VG E +DLL E++ LVEW +G+FD ++L LP E+I++ + T+Q+ F Sbjct: 233 AANSVGGEAEIPEDLLNEVVNLVEWPTAVVGTFDGEFLVLPPEVIKMVMVTHQRYFPVLD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI +SN + A I GN RV+ ARL D F+K D Sbjct: 293 TQGNLKPYFITISNGDPAKA-AIIASGNERVIRARLADGEFFYKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALV 411 L KPL+ + L+ +V F +G+ ++V+RI +IA+ + + ++A + Sbjct: 338 ------LKKPLENYLPDLE--NVTFQEDLGSVRDKVNRIIANADRIAKQLKVSEGELAQI 389 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L KADL +++V EFPEL+G +G++YA+ E+ AI EH P+G + +PTN Sbjct: 390 KRAALLCKADLVSQMVYEFPELEGIMGEKYALAGGESEGVAKAIVEHYLPKGASDRLPTN 449 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V+LADKLDTL++ + + P+GS DP+ALRRA G++ II + + L + ++D Sbjct: 450 IISQVVALADKLDTLVSIFGLGMLPTGSSDPFALRRAANGVLNIIWSADLPLNLHELLKD 509 Query: 532 -----------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILRPEN--------D 565 +L FF R++ L D I +DL+ A+L E+ Sbjct: 510 LTTDFVNSHPNAMLGLIHHLEDFFLQRIRTLLQDEKSIDYDLVNAVLGDEDIEYKERALQ 569 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEA 623 +LL + D L E + + R ++ + E+ + I+P + Sbjct: 570 DLLDVRDRALFLQEIRGDGTLDIIYETINRSTRLAKQGDLDTGELQPDTVINPSLFEKSS 629 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 E+ L + + + Q +++ + Y Q+ L +I + FFD VLV + +V Sbjct: 630 EQALMEALENLIPNTQAALETRNYRQLVTALAAIVPTVTQFFDGENSVLVMDSNPKV 686 >gi|313623739|gb|EFR93881.1| glycyl-tRNA synthetase, beta subunit [Listeria innocua FSL J1-023] Length = 688 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 344/731 (47%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED---LTFREIKGVEYIYI 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ VL + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTVLLPSLEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + N + GHRF ++ Y L E V+++ R+ AI+ Sbjct: 168 EEIIPFEITGVSTSNTSRGHRFLGKTA-TIKQPSDYPHALLEQFVVVNASERKQAIVEQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 227 RELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQEGELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 --------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQ 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++P Sbjct: 384 DIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + I Sbjct: 444 QTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEVI 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGATELPSADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 +D + LN+ + + + R+ +I E +E+ P E E+ L+ Sbjct: 564 IDRAQILNKHADAEWFRPTIEALTRVVKISKKYED-----GVEVDPNLFENEYEQELFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYAGLTIVDR----LKAFADLRTTIDGYFDNTLVMTDNDELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|325139583|gb|EGC62123.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis CU385] gi|325200981|gb|ADY96436.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis H44/76] Length = 686 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 212/707 (29%), Positives = 348/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 15 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + +L+ Sbjct: 75 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQIGKPLGGLLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 133 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + Sbjct: 183 GNKTLGHRFLSDGEITIENADSYAAQMREQGKVVASFAERKAAIQTVLEGQARRLNATAA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 342 LESRLPKL--TNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P KI+ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGETEEITEAVEQHYQPRFAGDNLPEGKIAAAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFNSFPQGLLNEKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 520 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 579 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 635 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 681 >gi|304437024|ref|ZP_07396987.1| glycyl-tRNA synthetase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369975|gb|EFM23637.1| glycyl-tRNA synthetase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 682 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 211/729 (28%), Positives = 329/729 (45%), Gaps = 81/729 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA + EDL+ + +LKE + Y+ +R TP R L + GL+ Sbjct: 4 DLLFEIGTEEIPAHVMPHLLEDLAQLAETMLKEHRLSYEKVRTLGTPRRAALIVTGLAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G KA GF R G+ + Q + G VY A + + Sbjct: 64 QEDVNTETRGPSVAIAFDADGNPTKAGAGFARGQGVDPSALIQ-----RDGYVY-ASVHE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L +++P ++ +P P SMRW F +IRP++ + + E I Sbjct: 118 SGAATAELLTSLLPDLVRAIPLPNSMRWGDLD-----FRFIRPIRWFVALYGTE-----I 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + GN + GHR AP + S Y E+A +++DPE RR I Sbjct: 168 VPFTLAGVTSGNHSRGHRTLAPADFVITSAADYEAACEKAYIIVDPERRRAMICEQITET 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 288 DGSLLPAFITVRNGGKA-HLDVVAHGNERVLRARLADAQFFFDEDRR------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI------DADVA 409 K L + +L VVF +G+ E+ R+ L I + + +A Sbjct: 334 -------KSLAEHREKLKT--VVFQRGLGSMYEKTERLTALTTAIVEEMAAGDADGTALA 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSKADL T +V EF ELQG +G+EYA+L E+ + AI+E PR + +P Sbjct: 385 DARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGESPAVACAIDEQYMPRFAGDELP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK--------- 520 + + +S ADK+D ++ ++ P+GS+DP+ALRR LG++ +++E K Sbjct: 445 QTPLGVALSAADKVDNIVGTFSQGRIPTGSQDPFALRRQALGLVLMLIEQKSTMLLSDLV 504 Query: 521 ------IDIPLSQFIEDQNLI-LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 D+ +S + Q + F RLK L +R +R+D+ EA+L + D + + Sbjct: 505 DEACDLYDLDVSLCQKMQAYVADFIRLRLKNVLTERGVRYDVQEAVL-EDVDFVADVPVR 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ +S + + S R+ I + P E E L + Sbjct: 564 AAYVERLLASDGADALVQSFVRVGNIAR------GVTGGAVDPALFQAEEEGALLSAYQT 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 E ++ + I FFD V+V D V++NRLSLL+ I + +L Sbjct: 618 AAAARAEG------EDTLPAERALGKAINTFFDAVMVMDKDARVKENRLSLLKMIDDYLL 671 Query: 694 IVINVQKIV 702 + KIV Sbjct: 672 ETADYSKIV 680 >gi|284801845|ref|YP_003413710.1| hypothetical protein LM5578_1600 [Listeria monocytogenes 08-5578] gi|284994987|ref|YP_003416755.1| hypothetical protein LM5923_1552 [Listeria monocytogenes 08-5923] gi|284057407|gb|ADB68348.1| hypothetical protein LM5578_1600 [Listeria monocytogenes 08-5578] gi|284060454|gb|ADB71393.1| hypothetical protein LM5923_1552 [Listeria monocytogenes 08-5923] Length = 688 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 201/732 (27%), Positives = 343/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVSSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEAM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD---LTFRDIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 167 GEEIIPFEITGVATSNTSRGHRFLGKSA-TIKQPSDYPNALLEQFVVVNAEERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++E L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQEDELLPHFVTVRNGNHENLN-TVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 ---------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYED-----GVEVDPALFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|254827746|ref|ZP_05232433.1| glycyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254829783|ref|ZP_05234438.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes 10403S] gi|258600125|gb|EEW13450.1| glycyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] Length = 688 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 201/732 (27%), Positives = 343/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + + ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVSSSVLQLEKRVTDWLTENKIEFGEIKTYSTPRRLTVLVEAM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKVDPAD---LTFRDIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTSALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF ++ Y L E V+++ E R+ AI+ Sbjct: 167 GEEIIPFEITGVATSNTSRGHRFLGKSA-TIKQPSDYPNALLEQFVVVNAEERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L S ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELESMENWQIKEDDDLLEEVTNLVEYPTVLSGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++E L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQEDELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A +D D Sbjct: 334 ---------LKMTIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLDWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPNSAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N +IP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWNIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LNE + + + R+ +I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNEHAEAEWFRPTIEALSRVVKIAKKYED-----GVEVDPALFENEYEQALFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + +R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKFDYAGLTIIER----LKAFADLRTTIDAYFDNTLVMSDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|319940873|ref|ZP_08015212.1| glycine tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319805755|gb|EFW02536.1| glycine tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 701 Score = 693 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 221/727 (30%), Positives = 371/727 (51%), Gaps = 57/727 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG 58 M + L+E+ +EE+P + K +E + + L + + + Y P RL +++ Sbjct: 6 MTNLLVELQTEELPPKALRKLSEAFAEGVCKSLADAHFLADSSVTTAYGAPRRLAVHITD 65 Query: 59 LSPHSPEKI-EERLGP------RVGAGKKAIDGFLRSTGLQ-TISDCQIKKDPKKGDVYL 110 + SP++ ++L P G A+ + + G+ ++D + D K +Y Sbjct: 66 VLAKSPDETFRQKLVPVKVGIGADGQATPALVKKMAALGINCAVTDLERVDDGKNEQLYY 125 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 +R+ L L+ + A++ +P PK M + ++ S++RP++ + +L E Sbjct: 126 EGVRQGVELASG-LQHALEYAVKHLPIPKVMTYQLADG-VTTVSFVRPVRHLTALLGTE- 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+ ++L + G +T GHRFH PI +++ D Y+ ++ A V+ + RR I Sbjct: 183 ----IVPVELFGLKSGRLTRGHRFHTSEPIAIENADSYVEQMKAAFVMPCYDERRAVIEA 238 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + R A+A+ E + +DLLEE+ L EW ++ F+ ++L +P+E + LT++ NQK F Sbjct: 239 ELKRRAAALDAEAIMPEDLLEEVTALTEWPVIYESQFESEFLAVPQECLILTMQLNQKYF 298 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 R G L N F+LVS + A DGG AI +GN+RVV ARL DA F+ +D+ Sbjct: 299 ALEDRSGKLMNRFLLVSQLIAKDGGKAISEGNARVVRARLADAKFFYDQDR--------- 349 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 L+ R+ L VV+H K+G+Q ER+ R+R + A L+ A+ Sbjct: 350 -----------MHTLESRVEGL--RHVVYHNKLGSQYERMLRVRRIAAAAAALLGANKTE 396 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DRA +L+KADL T +V EFPELQG +G+ YA E AI EH +PR + +P+ Sbjct: 397 ADRAAMLAKADLRTLMVGEFPELQGIMGEYYAENDKEPKDVALAIREHYQPRYAGDALPS 456 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S+ V+LADKL+TLI + I + P+G KDP+ALRR LG++R+++E ++D+ L I+ Sbjct: 457 TSVSLAVALADKLETLIGLFGIGQLPTGEKDPFALRRHALGVLRMLIEKELDVSLPALID 516 Query: 531 ---------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 Q L+ FF DRL++ L +R +A+L D L I I Sbjct: 517 AAWEAEKDVAGVVDNRQELLTFFADRLRVMLRERGATAQEADAVLAKRLDKLADIPKRIG 576 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + E + KRI IL +K E+S +I P L AEK L+ + Sbjct: 577 AVRAFMDLPEAEALTAANKRIGNIL---KKVEGEVSEKIDPALLQEAAEKNLFEELRAVE 633 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + R+ + + ++ P++ FF+ V+VN +D +R NRL+LL+ + ++ V Sbjct: 634 PAAEALYAEGRFEDMLVTIAALRSPVDAFFETVMVNAEDPALRANRLALLKRLYGVMNAV 693 Query: 696 INVQKIV 702 + ++ Sbjct: 694 AEISRLA 700 >gi|220932081|ref|YP_002508989.1| glycyl-tRNA synthetase, beta subunit [Halothermothrix orenii H 168] gi|254781853|sp|B8CXH5|SYGB_HALOH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219993391|gb|ACL69994.1| glycyl-tRNA synthetase, beta subunit [Halothermothrix orenii H 168] Length = 686 Score = 693 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 214/728 (29%), Positives = 362/728 (49%), Gaps = 71/728 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EE+PA + K DL + I L+++ + ++ + + TP RL L++K L Sbjct: 1 MARDLLFEIGTEEMPAGLIGKIRSDLKDLAINTLEDKRLDFKECKVFSTPRRLVLFVKEL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EK E GP G +A GF R+ G++ + D IK D VY+ Sbjct: 61 AEKQEEKREVVKGPARSIAFEDDGTPTRAAKGFSRAQGVE-VDDLIIKDD----YVYVEK 115 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + + +LK I+P I K+P P+SMRW+ + F +IRP++ +L + Sbjct: 116 IEQ-GQDTAGLLKDILPGLINKLPLPRSMRWADYN-----FKFIRPIRWLLALF-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II + + G T GHRF ++V+ DHY +E+ +++D RR IL Sbjct: 165 EEIISFSMAGVQSGAYTRGHRFLVKDRLEVKDPDHYFDVMEKGYIIVDHNKRRELILKQI 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + +G +VED DLL E++ LVE+ F G FD+ YL LP++++ ++ +Q+ F Sbjct: 225 REIEKEIGKVMVED-DLLTEVVDLVEYPTAFYGKFDRSYLELPDDVLITSMAEHQRYFPV 283 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L+ F+ V + D + GN V+ ARL DA F++ D Sbjct: 284 IDEDGSLSPYFVGVRDG-IEDYIEEVRYGNEMVLRARLADARFFFEED------------ 330 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L +++R L+ ++VF +G+ ++V R++ L +I + ++ + + Sbjct: 331 --------LKVSIEERQKELE--EIVFQEDLGSMMDKVKRLKQLVIQIGKSLNLKESQLQ 380 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSK DL TE+V EF +LQG +G+EYA++ E+ AI E PR + +P Sbjct: 381 SLIRAAELSKNDLVTEMVNEFTKLQGVMGREYALINGEDEEVATAIYEQYLPRYSGDRLP 440 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +S+ADK+D + + +++ PSGS+DP+ALRR GI+ II++ ++ + LS + Sbjct: 441 QTLYGRILSIADKIDNITSHFSLGMIPSGSQDPFALRRQANGIVNIIIDAQLPLKLSSLL 500 Query: 530 EDQNLIL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +L F RL+ L +R IR+D+I +++R +D+ I+ + Sbjct: 501 NWSIEVLEPGDKDFVNEEKSFLLQRLETILDERGIRYDIINSVVRVGDDDPNNILSRAEA 560 Query: 577 LNEFFSS--AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + R + + E N +I+P+Y EK LY + Sbjct: 561 VMSLRKENPDLFVDLIQGLVRARNLASKGEGNN-----DINPEYFECREEKELYDIYRKI 615 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 IQ K Y L + EP++ F D V+V V+D +++NRL+LLQ I N++ Sbjct: 616 KDEIQRQFKKKNYLSGLKKLVDVKEPVDNFLDNVVVMVEDERIKNNRLALLQEISNLVSG 675 Query: 695 VINVQKIV 702 V+N+ +I Sbjct: 676 VMNISEIA 683 >gi|16800563|ref|NP_470831.1| glycyl-tRNA synthetase subunit beta [Listeria innocua Clip11262] gi|25009313|sp|Q92BQ2|SYGB_LISIN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|16413968|emb|CAC96726.1| glyS [Listeria innocua Clip11262] Length = 688 Score = 693 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 199/732 (27%), Positives = 343/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED---LTFREIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 167 GEEIIPFEITGVSTSNTSRGHRFLGKTA-TINQPSDYPHALLEQFVVVNASERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQEGELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 ---------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMERVQKVALMLADYLNWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGVL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGATELPSADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LN+ + + + R+ +I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNKHADAEWFRPTIEALTRVVKISKKYED-----GVEVDPNLFENEYEQELFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKYDYAGLTIVDR----LKAFADLRTTIDGYFDNTLVMTDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|313618900|gb|EFR90764.1| glycyl-tRNA synthetase, beta subunit [Listeria innocua FSL S4-378] Length = 688 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 199/732 (27%), Positives = 343/732 (46%), Gaps = 78/732 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED---LTFREIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 167 GEEIIPFEITGVSTSNTSRGHRFLGKTA-TINQPSDYPHALLEQFVVVNASERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQEGELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 ---------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P + Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGVL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 ISRIVDMERAEGATELPSADVKKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNVIPQ 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++D + LN+ + + + R+ +I E +E+ P E E+ L+ Sbjct: 563 LIDRAQILNKHADAEWFRPTIEALTRVVKISKKYED-----GVEVDPNLFENEYEQELFD 617 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + R + I+ +FD LV D+ E+++NRL+LL + Sbjct: 618 KLEKLKYDYAGLTIVDR----LKAFADLRTTIDGYFDNTLVMTDNDELKNNRLALLFELA 673 Query: 690 NIILIVINVQKI 701 + I + +I Sbjct: 674 SFIKEFAQMDEI 685 >gi|258541399|ref|YP_003186832.1| glycyl-tRNA synthetase subunit beta [Acetobacter pasteurianus IFO 3283-01] gi|256632477|dbj|BAH98452.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-01] gi|256635534|dbj|BAI01503.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-03] gi|256638589|dbj|BAI04551.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-07] gi|256641643|dbj|BAI07598.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-22] gi|256644698|dbj|BAI10646.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-26] gi|256647753|dbj|BAI13694.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-32] gi|256650806|dbj|BAI16740.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653797|dbj|BAI19724.1| glycyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-12] Length = 686 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 232/719 (32%), Positives = 367/719 (51%), Gaps = 53/719 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +A E+L +L L + QN P R+ L + Sbjct: 1 MPELLIELFSEEIPARMQSQAGENLLRLLTEAL--APLHPQNAVAATGPRRIAASL-NID 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR GA KA+DGF R G+ T ++ ++ +P Sbjct: 58 ATVPGRTVSERGPREGAPDKALDGFTRKHGV-TRDALTLQN-----GFWILEREEPAVSA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + + ++P +++ PWPKSMRW S+F+W+RPL+ ILCIL E + + Sbjct: 112 QAHIAAVLPDLLRRFPWPKSMRWGAG----SSFTWVRPLRRILCILDGETVPFSLAQGED 167 Query: 181 KE--IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASA 238 + N+T GHRF P + V S + + L + V++D RR I + LA++ Sbjct: 168 NGHNLVAANLTEGHRFLNPGAVAVSSAAEWRKTLHDRHVMVDAAERRKTITEGLNALAAS 227 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 GL++V D L++E+ GLVEW F+G D +++ LP E+++++++ NQ+ F R +G Sbjct: 228 EGLQIVPDAGLVDEVAGLVEWPVPFLGQIDAQFMELPAEVMQVSMRVNQRYFALRNSDGT 287 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A F V+NI +D G IV GN RV+ AR DA HFW D+ Sbjct: 288 AAPRFAFVANIVPADDGTLIVTGNERVLRARFADARHFWDLDRK---------------- 331 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + L R+ LD + FHA +G+QG+R R+ L +A ++ A A +RA LS Sbjct: 332 ----QTLASRLKALD--SITFHASLGSQGDRTRRMVRLAGILADMVGAPKADCERAAKLS 385 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFPELQG +G YA E+ + AI E PRGP ++VPT +S+ + Sbjct: 386 KTDLTTGMVGEFPELQGVMGGYYAKHDGESAAVAQAISEQYTPRGPGDSVPTAPVSVVLG 445 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-- 536 LAD++D L+ F+A EKPSGS DP+ LRRA LG+IR+I EN + + L + L Sbjct: 446 LADRIDMLVAFFAAGEKPSGSGDPFGLRRAALGVIRLIRENNLRLDLVRLFVLAAEALPA 505 Query: 537 -------------FFHDRLKLYLHDRDIRHDLIEAI-LRPENDNLLTIVDLIKHLNEFFS 582 F +RL++ + RHD + AI + + +++ ++ L + Sbjct: 506 DLQDAPDLDLLPQFIAERLRVQVRSEGARHDCLAAISVDNSDTDIVRLLARAHALQDMLE 565 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + G+ L + +R IL IE+KK+ P + E+ L+ + +++ Sbjct: 566 TEDGKNLLAATRRAANILRIEDKKDGPHEDMPDPALFTQDEERALFDALERVEPAVEKDF 625 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +R+ S+ EP++ FF+ V VN + E+R NRL LL + ++ ++ + +I Sbjct: 626 AAERFTDAMREAASLREPLDKFFEVVTVNAPEPELRLNRLKLLSRVVRMMRLIADFSQI 684 >gi|167646138|ref|YP_001683801.1| glycyl-tRNA synthetase subunit beta [Caulobacter sp. K31] gi|167348568|gb|ABZ71303.1| glycyl-tRNA synthetase, beta subunit [Caulobacter sp. K31] Length = 728 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 260/764 (34%), Positives = 383/764 (50%), Gaps = 101/764 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLE++SEEIPARMQ AA DL + L G + Q ++ + P RL L ++GL Sbjct: 1 MPQLLLELFSEEIPARMQAAAARDLERMAHEHLAAAGFLPQALKTFAGPRRLTLVVEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 ++ EE GPRVGA +A++GFLR GL D +++D V++A + K R Sbjct: 61 IAQADRKEELKGPRVGAPPQALEGFLRKAGLT--QDQLVERDG----VWMAFIEKTGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ +V ++ WPKSM W + W+RPLK ILC+ E ++ + Sbjct: 115 PEIVAEMVETIVRGFAWPKSMTWGSGK-----LRWVRPLKRILCVFDRE-----VVPFAI 164 Query: 181 KEIPCGNITYGHRFH------APHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + I G++T GHRF K + D Y + L + V+LD E R++ IL Sbjct: 165 EGIESGDVTEGHRFMRVGPGWGGQAFKARDFDEYAKGLLDHFVVLDVEERKSRILEGCKT 224 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L A LELVED LLEE+ GL EW +G D +L LP E+IR +++T+QK F R Sbjct: 225 LCFARNLELVEDLGLLEEVAGLAEWPTPVLGDMDPVFLDLPAEVIRTSMRTHQKYFAVRD 284 Query: 295 -REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G LA FI ++N+Q++DGG I +GN++V+++RL DA FW D Sbjct: 285 PATGGLAPHFITIANVQSADGGKVIAEGNAKVLSSRLSDARFFWDEDVKV---------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 + LD + V FHAK+GT ERV RI L ++IA L+ AD Sbjct: 335 GFEPWLD------------KLNGVTFHAKLGTMAERVERIVALAREIAPLVGADPDKAAE 382 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL +++V EFPELQG +G YA + D I +H KP+GP + VPT + Sbjct: 383 AARLAKADLTSQMVGEFPELQGLMGGYYARAAGMDPEIADTIRDHYKPQGPSDAVPTAPL 442 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 S+ V+LADKLDTL+ F+AI+EKP+GSKDP+ALRRA LG+IR +L+ +PL + + + Sbjct: 443 SVAVALADKLDTLVGFFAIDEKPTGSKDPFALRRAALGVIRTLLDVGARLPLFEVLSTAH 502 Query: 534 L------------------------------------------ILFFHDR---------- 541 + + +R Sbjct: 503 VQLASQVSGKRLEDDRWARYQAAKLLGVVDKNAIPIDCTVRVGVDPIEERLSDVRAILEF 562 Query: 542 ----LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 LK+ L D+ RHDL++A+ +D+L+ IV ++ L+ F + G+ L KR Sbjct: 563 FADRLKVTLKDQGKRHDLVDAVFALGDDDLVRIVARVEALDGFLKTDDGKNLLAGYKRAS 622 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 IL EEKK + + E E LY + + E+MD ++ L + Sbjct: 623 NILKAEEKKGWKGEGVAALPPSASEPEIALYDAVRVVQRPLAEAMDADNFNAAMQRLAGL 682 Query: 658 CEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 P++ F D V VN D + R++RLS L ++ + V + I Sbjct: 683 RSPVDAFLDGVFVNSDIKVERNSRLSTLAAVRQAMNRVADFSLI 726 >gi|227524442|ref|ZP_03954491.1| glycine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] gi|227088401|gb|EEI23713.1| glycine--tRNA ligase [Lactobacillus hilgardii ATCC 8290] Length = 693 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 205/733 (27%), Positives = 341/733 (46%), Gaps = 74/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI EEIPA + + L LK++ + + ++ + TP RL LY+ GL Sbjct: 1 MANNFLLEIGLEEIPAHVVTPSINQLKKRASDYLKDQRITFDQIKTFSTPRRLTLYITGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ + GP G KA GF R G T I KG Y+ V Sbjct: 61 ADKQPDIDKSVKGPAKKIAQDTDGNWTKAAIGFSRGQGATTDD---ITFKEVKGTDYVFV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D + T + I + +P M+W+ +F ++RP+K ++ +L Sbjct: 118 EKHIAGKSVDEVLTGMKDVITAMTFPTMMKWAKY-----SFEYVRPIKWLVALL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I + ++ +T GHRF +++ + D Y L + V+ D + R+ I+ Sbjct: 168 DKVIPFTILDVSTDRVTSGHRFLGKD-VELANADEYEEKLTQQFVIADAKKRKELIVKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H++A ++ D DLLEE+ LVEW F G F++KYL +P+E++ ++K +Q+ F Sbjct: 227 HKIAEDNDWQINLDPDLLEEVNNLVEWPTAFAGKFNEKYLKIPDEVLVTSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI V N D ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 287 TDGNGTLLPHFISVRNGNDYD-IQNVIAGNEKVLTARLEDAMFFYEEDQK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 K + + + RL V FH KI T E++ R++V+ + + ++ Sbjct: 336 ----------KTIAEDVERLK--KVSFHDKISTMFEKMQRVQVISNYLGKQFGFSDKELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 384 DEQRAAEIYKFDLVTGMVGEFAELQGVMGEKYALLNGEAPAVAKAISEHYMPISANGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + + ++++DKLD+++ F+A PSGS DPYALRR GI+RI+ + K + Sbjct: 444 ASNVGALLAVSDKLDSILTFFAAGMIPSGSNDPYALRRQATGIVRIVADKKWNFDLIDTL 503 Query: 525 ---------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 L Q + + F DR+K YL D IR+D+ +A+ ++L Sbjct: 504 KAIINLQDEKQVAPKLDQAGQITAVSDFIKDRIKQYLDDLGIRYDISDAVTSGSQTDILF 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L E + + S R+ +I K+ + L + E+EK L Sbjct: 564 NISSGQVLQEQKDDDAFKSIIESLTRVLRISKKGHFKDND--LVVDGSLFENESEKVLNQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ E + + D L + + I +FD +V D ++RDN L L + Sbjct: 622 EVASAAEGYYEISAKEDF----DRLSGLKDAINAYFDATMVMDKDEKLRDNHLRQLTLLS 677 Query: 690 NIILIVINVQKIV 702 ++IL + ++ K+V Sbjct: 678 HLILHLGDLDKLV 690 >gi|319761352|ref|YP_004125289.1| glycyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC] gi|317115913|gb|ADU98401.1| glycyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC] Length = 721 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 206/748 (27%), Positives = 350/748 (46%), Gaps = 79/748 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L L +G+ Y +P RL +++G+ Sbjct: 5 SNLLVELFVEELPPKALQKLGDAFAGVLRDQLVAQGLAAAGAPLTAYASPRRLAAHIEGV 64 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 +P+K + ++L P G A+ L + G + +K+ K +V Sbjct: 65 LAQAPDKAVSQKLMPVAVGLAADGQPTPALLKKLSALGADASAVAGLKRVHDGKAEVLYY 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + L+ + AI ++P PK MR+ ++ ++RP ++ + A Sbjct: 125 ESTAQGATLAQGLQKALDEAIARLPIPKVMRYQLEDG-WTSVHFVRPAHGLVALHGAG-- 181 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAIL 229 ++ + + + GN T GHRF A P+ ++ D Y L V+ RR I+ Sbjct: 182 ---VVPVAVLGLAAGNATQGHRFEAAVQPVVLRDADSYAEQLRAQGAVIAGFAERRAEIV 238 Query: 230 NDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 A +G +ED LL+E+ LVE V + F++++L +P+E + LT+K NQ Sbjct: 239 RQLRAAAEKLGGGVRPIEDDALLDEVTALVERPNVLVCQFEREFLAVPQECLILTMKANQ 298 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F EG L + F++VSNI D GA ++QGN RVV RL DA F+ +D+ Sbjct: 299 KYFPLLDAEGRLTHRFLVVSNISPQDAGA-VIQGNERVVRPRLADAKFFFDQDRK----- 352 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 K L R+A+L VV+H ++G+QGERV R+R + K I Q + A Sbjct: 353 ---------------KTLASRVAQLS--KVVYHNQLGSQGERVERVRAIAKAIGQQLFAA 395 Query: 408 VAL--------------------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE 447 +A VD A +L+K DL T++V EFPELQG +G YAV Sbjct: 396 LAERHELQGTQDGEIAQDWLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGYYAVNDGL 455 Query: 448 NISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRR 507 AIE+H KPR + +P + + V+LADK++TL+ + I P+G +DP+ALRR Sbjct: 456 PDEVAHAIEDHYKPRFAGDELPRESVGLVVALADKIETLVGMFGIGNLPTGDRDPFALRR 515 Query: 508 ATLGIIRIILENKIDIPLSQFIEDQNL-------------ILFFHDRLKLYLHDRDIRHD 554 LG+IR+++E + + L + F +DRL L ++ Sbjct: 516 HALGVIRMLMEKDLPLDLGALLAGAVPAFAGRIDDPSALLADFIYDRLAGALREQGYSSQ 575 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 ++A+L L + + + F + + + + KR+ IL +K ++ + Sbjct: 576 EVDAVLALRPQRLALVEKQLAAVRAFSALPESQALAAANKRVSNIL---KKAGGDVHAHV 632 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 +P+ L +AE+ LYA + F + Y L + P++ FFD V+VN + Sbjct: 633 NPELLREQAEQDLYAALQRFVPEADAQFERGDYTASLQTLAVLRAPVDAFFDDVMVNAEQ 692 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKIV 702 ++R NRL LL+ + + V ++ ++ Sbjct: 693 LDLRLNRLGLLKTLHEAMNRVADLSRLA 720 >gi|319409761|emb|CBY90067.1| glycyl-tRNA synthetase beta chain (glycine-tRNA ligase beta chain; GlyRS) [Neisseria meningitidis WUE 2594] Length = 687 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 213/707 (30%), Positives = 352/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + +L+ ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKLLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNKTLGHRFLSNGEITIENADSYAEQMREQGKVVASFAERKTAIQTALEGQACRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F R G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDRNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L ++VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--VNVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEITEAVEQHYQPRFAGDNLPEGKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRR+ LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRSALGILRMLMQYGLDVNELIQTAFNSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|67922573|ref|ZP_00516080.1| Glycyl-tRNA synthetase, beta subunit [Crocosphaera watsonii WH 8501] gi|67855582|gb|EAM50834.1| Glycyl-tRNA synthetase, beta subunit [Crocosphaera watsonii WH 8501] Length = 711 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 198/738 (26%), Positives = 340/738 (46%), Gaps = 70/738 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ +EE+PA +A I+ L+E + +N+ Y TP RL + + GL Sbjct: 3 FLLEVGTEELPADFIDEAIAQWQQIIPKSLEENFLTPENLEVYGTPRRLAILISGLPEQQ 62 Query: 64 PEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP V A KA +GF R + T+ D +I+ KGD + Sbjct: 63 KDRDEVIKGPPVKAAFKDGKPTKAAEGFARKQEV-TLDDLEIRPTD-KGDFVFIEKKIKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R +++L+ +P I + + MRW + RP++ ++ + E +I++ Sbjct: 121 RQTKEILQESIPNWINSLEGRRFMRWGNGE-----LRFSRPIRWLVALCDQEILPLEIVN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I ++ GHR P + + Y V +DP+ R+ I D ++ Sbjct: 176 GD-STITSDRLSRGHRILHPDTVSIAQAAEYRETFRAVYVEVDPKQRQQIIEKDIETISQ 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + +DLL E+I LVE+ G FD ++L LP E+I + +Q+ F + Sbjct: 235 QLTGTADIPEDLLTEVINLVEYPTAVAGKFDPEFLNLPTEVIITVMVKHQRYFAVKKSAQ 294 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI ++N + I QGN RV+ ARL DA F+ D + Sbjct: 295 ELLPNFITIANGDP-NKKDIIAQGNERVIRARLADAQFFYTSDCD--------------- 338 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRA 414 +PLD + +L+ +V F ++GT +V RI + ++I++ ++ + ++ Sbjct: 339 -----EPLDSYLPQLE--NVTFQKELGTMRYKVDRIMDMAQQISEQLEVREQEQEEIEST 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L KADL T++V EFPELQG +G++YA+ E+ I EH PRG + +P + Sbjct: 392 ALLCKADLVTQMVYEFPELQGIMGQKYALASGESEEVAQGIFEHYLPRGAKDIMPKSLTG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------ 528 V +AD+LDTLI+ + + P+GS DP+ALRRA II + E ++ I L+Q Sbjct: 452 QVVGIADRLDTLISIFGLGMIPTGSGDPFALRRAANAIITVTWEAELPINLAQLLLQGCQ 511 Query: 529 ----------IEDQNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLLT 569 + L FF R++ L D +I +DL+ A+L + NLL Sbjct: 512 AFMADHGDKESPLEALQTFFIQRIQNILQDDFNIDYDLVNAVLGEADAEYMERALQNLLD 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKRL 627 + D + L E S+ ++ + R ++ A + + E+ + + +E+ L Sbjct: 572 VKDRSEFLQEIRSNGMLDRIYETINRSTRLAAKGDLEYTELDPSKVVRTELFEKSSEQEL 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVRDNRLSL 684 + + + ++ D Y + + L I + FF D VLV D++ ++ NRL+L Sbjct: 632 FNGLMALVSKTTQAQDEGDYQLLIEGLLDIIPKVSNFFDGEDSVLVMDDNQNIKQNRLNL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L ++N ++ + IV Sbjct: 692 LGVLRNHGRVLADFGAIV 709 >gi|261379391|ref|ZP_05983964.1| glycyl-tRNA synthetase, beta subunit [Neisseria subflava NJ9703] gi|284797839|gb|EFC53186.1| glycyl-tRNA synthetase, beta subunit [Neisseria subflava NJ9703] Length = 687 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 218/707 (30%), Positives = 353/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGAAEYTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIIND-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + E I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGE-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERATRLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETVDFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|332686711|ref|YP_004456485.1| glycyl-tRNA synthetase beta chain [Melissococcus plutonius ATCC 35311] gi|332370720|dbj|BAK21676.1| glycyl-tRNA synthetase beta chain [Melissococcus plutonius ATCC 35311] Length = 693 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 200/732 (27%), Positives = 337/732 (46%), Gaps = 71/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI EEIPA + + L ++ L E+ + Y+ ++ + TP RL +Y+ + Sbjct: 1 MAKDLLLEIGLEEIPANLVTPSRLQLEERIVQFLNEQRLTYETIQTFSTPRRLAVYVSEI 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP G KA GF G++T + I G Y + Sbjct: 61 PDEQEDIYEEVKGPAKKIALDNEGNWTKAAQGFAIGQGVETDA---IIFRELMGIEYAYI 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K + T + I + +P +M WS +IRP+ I + Sbjct: 118 TKYIKGQAAVNVLTGLKEIILSMTFPVTMCWSNYD-----LDYIRPIHWITALF-----G 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I + + NI+ GHR I ++ Y L E V+ DP+ R+ I Sbjct: 168 EQVIPFSILNVQTNNISQGHRSLGDQ-IIIRQASDYQTKLSEQFVIADPKERKRIIQQQM 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ L+ D+ LLEE+ LVE+ F+G+F +KYL +P+E++ ++K +Q+ F Sbjct: 227 EEISQKNNWHLIYDEALLEEVTNLVEYPTAFVGNFSEKYLAIPKEILITSMKDHQRYFEV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L FI V N ++QGN +V+ ARLEDA F+ D+ K Sbjct: 287 YNHEGDLLPHFISVRNGD-QVHLKNVIQGNEKVLVARLEDAEFFYNEDKKLSITTCVNK- 344 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVA 409 + V FH KIGT E++ R+ ++ + I + + ++ Sbjct: 345 ---------------------LKQVTFHDKIGTIYEKMQRVCLISQIIGKKVGLTKTELL 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA + K DL T +V EFPELQG +G++YA+L E + AI EH P +P Sbjct: 384 DLKRASEIYKFDLVTNVVNEFPELQGIMGEKYALLHGEKPNVAQAIREHYLPISSEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 T+ I +++ADKLD++ +F+A + PSGS DPYALRR T GIIRI+ ENK + P+ Q Sbjct: 444 TSIIGSVLAVADKLDSVFSFFAKDMIPSGSNDPYALRRQTYGIIRIVAENKWEFPIIQLQ 503 Query: 530 E-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + ++ F R++ L RHD+I+A++ E +LL + Sbjct: 504 KEIYAAINAKESFGIKLNDDNMQVVDFIKGRIRQLLSSEHFRHDIIDAVISSEQQDLLKL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + K L + + + + + R+ + ++ +E L + + +E++LY Sbjct: 564 LTTAKTLRKHLADDDFKASIEALTRVINLAEKGKELMKEPILTVELELFENNSEEKLYEA 623 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + E + Y + + + IE +FDQ +V +D+ +++NRL L I Sbjct: 624 VQKISANFDEQTIDENYDALMN----LRILIENYFDQTMVMTEDKAIKNNRLKQLLQIAQ 679 Query: 691 IILIVINVQKIV 702 + + ++ Sbjct: 680 MASSIARFDLLI 691 >gi|282858171|ref|ZP_06267366.1| glycyl-tRNA synthetase, beta subunit [Pyramidobacter piscolens W5455] gi|282584093|gb|EFB89466.1| glycyl-tRNA synthetase, beta subunit [Pyramidobacter piscolens W5455] Length = 685 Score = 691 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 201/724 (27%), Positives = 342/724 (47%), Gaps = 68/724 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D +LEI +EEIP+R A D++ + + + + TP RL L ++ ++ Sbjct: 4 DLILEIGTEEIPSRFMPSALRDIAQYAEEEFAAQRLGHGRIEVMGTPRRLVLLVRSVAER 63 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-LAVLR 114 + EE GP + +A +GF RS GL Q++ G Y AV+ Sbjct: 64 QADLSEEHKGPTWKSAFDGTGTPTRAAEGFARSKGLAV---EQLESRNVNGVDYAFAVIN 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L ++ I ++ +PK+M W S + RP++ LC++ A+ Sbjct: 121 HKGGAADALLPDMMKRIISRIVFPKNMYW-----YDSTVRFARPIRWFLCLIGAD----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +L + G T GHRF ++V+S D Y+ + + V++D + R + Sbjct: 171 VVEFELNGMKSGRTTCGHRFMGAPSVEVESSDDYLTVMYDNWVIVDQKKREEKMRAAIAG 230 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + + D L++E + LVE+ F GSFD+KYL +PEE++ ++K NQK F Sbjct: 231 IEKELDGAVELDPSLVQENLYLVEYPVPFYGSFDRKYLEIPEEVLTTSMKDNQKYFAVHD 290 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L CF+ VSN + + +GN RV+ ARLEDA FWK D Sbjct: 291 HSGKLMPCFVGVSNNLVPNM-ELVREGNERVLRARLEDAAFFWKED-------------- 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVD 412 L +PL R+ L +V++ K+G+ ++ + + +KI L+ DV LV+ Sbjct: 336 ------LKRPLSARVEDLK--NVIYQEKLGSVYDKTMEMVKISRKICDLLGNKDDVKLVE 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL T +V EF ELQG +G+EYA+ E+ AI E P +P++ Sbjct: 388 RAAYLSKADLVTGMVGEFSELQGIMGREYALKNGEDPRVAKAIAEQYMPTAAGNELPSDV 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL--------------- 517 I V +A++ ++ + + +P+ S+DPY LRRA I I+ Sbjct: 448 IGAVVGIAERAFNMVGAYKLGFQPTRSQDPYGLRRAIRCINEILWGLRLDLDLEALLAFI 507 Query: 518 ENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +++ +L+ F R + L +++ H+LIE L L + L+ Sbjct: 508 AQDLEVGGEAL---SSLLDFIRQRTLIQLKEKEYGHELIELALSVTGSRPLQTLYLLGAF 564 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 E K + SA R+ ILA E +S + P + AEK LYA +++ Sbjct: 565 AEVKQEDWFTKLVNSAVRVKNILAKAEG----VSSSVDPSLCVKAAEKDLYAAVNEAEKP 620 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++ ++ ++ + ++L + + FFD V+V +D VR NRL+LL + +N+ + V + Sbjct: 621 VEAALRKNDWNGLMNVLAQLSPAVSAFFDDVMVMDEDAAVRANRLALLSHCQNLFMRVGD 680 Query: 698 VQKI 701 + K+ Sbjct: 681 LSKV 684 >gi|160896736|ref|YP_001562318.1| glycyl-tRNA synthetase subunit beta [Delftia acidovorans SPH-1] gi|238687203|sp|A9BXZ8|SYGB_DELAS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|160362320|gb|ABX33933.1| glycyl-tRNA synthetase, beta subunit [Delftia acidovorans SPH-1] Length = 704 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 205/731 (28%), Positives = 348/731 (47%), Gaps = 61/731 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKG 58 + L+E++ EE+P + K + + +L LK +G++ + + Y +P RL ++ Sbjct: 4 SNLLVELFVEELPPKALQKLGDAFAGVLFEQLKAQGLLASSEARLTAYASPRRLAAHITE 63 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQI-KKDPKKGDVYL 110 + P + +K + ++L P G A+ L + G + + ++ K + Sbjct: 64 VLPQAEDKAVSQKLMPVSVGLDADGKPTPALIKKLAALGAGEEAVAGLTRQGEGKAEALF 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 ++ D ++ + AI K+P PK MR+ S+ ++RP ++ + E Sbjct: 124 HSSTVRGVMLADGVQKALDEAIAKLPIPKVMRYQLADG-WSSVHFVRPAHGLVVLHGTEV 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRRNAI 228 +I + + G T+GHRF A P+ ++S D Y L EE V+ RR I Sbjct: 183 ----LIGVKALGLTAGTATHGHRFEAAVDPVVIRSADDYAAQLREEGAVIASFAERRAEI 238 Query: 229 LNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 A +G +ED+ LL+E+ LVE V + F+K++L +P+E + LT+K N Sbjct: 239 ARQLQAAAERLGGGVRPIEDEALLDEVTALVERPNVLVCEFEKEFLDVPQECLILTMKAN 298 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L + F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 299 QKYFPLLDAAGKLTHQFLVVSNISPQDA-SAVIGGNERVVRPRLADAKFFFDQDRK---- 353 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L R+ L VV+H K+GTQGERV R+R + K IA+ + Sbjct: 354 ----------------KTLASRVEGLG--KVVYHNKLGTQGERVERVRSIAKSIARQLGD 395 Query: 407 D--VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D A L+K DL T++V EFPELQG +G+ YA+ +++ DAIE+H KPR Sbjct: 396 TGLAQQADLAAQLAKTDLVTDMVGEFPELQGTMGRYYALNDGLDVAVADAIEDHYKPRFA 455 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E + + Sbjct: 456 GDELPRGNAGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKDLALD 515 Query: 525 LSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L L F +DRL L ++ ++++L L + Sbjct: 516 LETLLVSVLPAFGDKIEDATPQLADFIYDRLAGNLREQGFSAQEVDSVLALRPQRLSDVQ 575 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + KR+ IL +K ++ + ++ L AEK LYA + Sbjct: 576 KRLEAVRAFGELPEAPALAAANKRVGNIL---KKADQAVQAQVDAAVLAEVAEKDLYAAL 632 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q+ Y L ++ P++ FF+ V+VN +D ++ NRL LL + Sbjct: 633 QSVAPKAQQQFAAGDYTASLQTLAALRAPVDAFFEHVMVNAEDPALKANRLGLLATLHEA 692 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 693 MNRVADLSRLA 703 >gi|320354068|ref|YP_004195407.1| glycyl-tRNA synthetase beta chain [Desulfobulbus propionicus DSM 2032] gi|320122570|gb|ADW18116.1| glycyl-tRNA synthetase beta chain [Desulfobulbus propionicus DSM 2032] Length = 694 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 202/728 (27%), Positives = 339/728 (46%), Gaps = 69/728 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L EI +EEIPA A + L+ L+ + ++ +R + TP RL L + L Sbjct: 1 MSELLFEIGTEEIPAGYIQPALDALAAGTAKKLRSLDLAFEGIRTFGTPRRLTLTIDRLQ 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ +E +GP AG KA GF RS G + + + KG+ + V Sbjct: 61 SRQADRRQEHIGPSKKAGFDAEGKLTKAAIGFARSKGCEPEALQVV--TTAKGEYLMVVE 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L ++ ++++ +PKSMRW+ + ++ RP++ I+ + + Sbjct: 119 DVQGQATSALLPVLLESLVRELVFPKSMRWADYN-----MAFARPIQWIVALYDGQG--- 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + L+++ + CG T GHRF AP +V +D Y+ L E VL+DP RR ++ + Sbjct: 171 --VPLEIEGVGCGRTTRGHRFMAPAEFEVGGIDEYLTKLAEHFVLVDPVQRRAKVIEEIQ 228 Query: 234 RL----ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 R A + + + LL+ + LVE+ G F++K+L LPEE + +++ +QK Sbjct: 229 RAVREGAGNPDAQPILHEGLLDTVTNLVEYPYGVCGHFERKFLQLPEETLVTSMREHQKY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +EG L F+ V+N + D A G+ RV+ ARLED L F+ D+ Sbjct: 289 FPVTDKEGKLLPLFVAVNNTRIEDVALA-ASGHERVLRARLEDGLFFFHEDRK------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL R A L +VF K+GT + RI L +A I ++ Sbjct: 341 -------------RPLADRCAELS--GIVFQNKLGTMAAKSERITRLAVALAGKIAPELE 385 Query: 410 -LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+KADL T +V EFP LQG +G+ YA+ E AIEEH P + Sbjct: 386 HDAIRAARLAKADLLTAMVGEFPTLQGIMGRVYALHDGEKAEVAQAIEEHYLPLRAGGEL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + V +AD++DTL+ +AI EKP+G+KD + LRR +G+I +I + + L + Sbjct: 446 PQSLLGALVGIADRMDTLVGCFAIGEKPTGNKDAFGLRRQAIGLINVIKGCNLSLSLGEV 505 Query: 529 IEDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 ++ F R + + +L+EA DN + + Sbjct: 506 AAAALQGYEGVVAQNPEVLDEVLSFIRLRFENEQIAAGLPQELVEAATSVGCDNPVDCLR 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 I L++ + S KRI I+ + + I+ L AE+ L+A ++ Sbjct: 566 RIAALDQIRTQESFRVLAGSFKRIRNIVKKNK------ATAINTDLLTEPAEQELFAALN 619 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + Y + + EP++ FFD+V+V +D VR NRL+LL + ++ Sbjct: 620 RVREKAWPMIEQREYQPALLEMLEMKEPVDRFFDKVMVMAEDEAVRQNRLNLLTALGELV 679 Query: 693 LIVINVQK 700 L V ++ + Sbjct: 680 LRVGDISR 687 >gi|297617793|ref|YP_003702952.1| glycyl-tRNA synthetase subunit beta [Syntrophothermus lipocalidus DSM 12680] gi|297145630|gb|ADI02387.1| glycyl-tRNA synthetase, beta subunit [Syntrophothermus lipocalidus DSM 12680] Length = 688 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 210/726 (28%), Positives = 346/726 (47%), Gaps = 67/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D + EI +EEIPA A D+ + L + + ++R TP RL LY+ L+ + Sbjct: 4 DLVFEIGTEEIPAAYMPNAIRDMEALAREKLSGANLSFGSLRTMGTPRRLVLYVYDLAEN 63 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++E GP+ G A GF R+ G+ S ++ D AV ++ Sbjct: 64 QAGWLKEVRGPKREQAFDAEGRPTSAALGFARAQGVTVESLE--VREMSGVDYVFAVKKE 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +VL ++ + + +PK+MRW+ S F + RP++ +L +L ++ Sbjct: 122 SGKKTVEVLPGVLREIVVDLGFPKAMRWAY-----SEFRFARPIRWMLALL-----GNEV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + ++ + N+T+GHRF + PI V +Y +E+A V++D E RR I Sbjct: 172 IPVQIENVEASNVTFGHRFLSERPITVNEAANYFELMEKAFVVVDHERRRQMIWEQILNT 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A G D++LLEE+ L+E+ F G F +YL LP E++ T+ +Q+ F + Sbjct: 232 AEQAGGYPYNDEELLEEVNFLLEYPTAFYGKFSPEYLVLPTEVLTTTMIEHQRYFPVFSD 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + GN RV+ ARLEDAL F++ D Sbjct: 292 DGKLLPGFIGVRNGD-EYNLEEVKAGNERVLRARLEDALFFYREDTK------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-VDRA 414 +PL ++ L +VV+ A++GT +V R++ + I + + RA Sbjct: 338 -------QPLASKVELLK--NVVYQARLGTVWSKVERLQDIAVFIGKETGLGRETTIRRA 388 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EFPELQG +G+ YA+ E+ +AI EH PR + +P Sbjct: 389 AYLCKADLETNMVYEFPELQGIMGRYYALASGEDPEVAEAILEHYLPRFAGDRLPETPAG 448 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 I VSLA+KLD L+ + IN KPSGS+DPYALRR LG++ IIL+ + + L + I Sbjct: 449 IAVSLAEKLDNLVGCFCINIKPSGSQDPYALRRQALGLVNIILKRGLRLDLEKAIRFVYQ 508 Query: 533 ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ F RL+ L D I +D+++A+L ++L + + Sbjct: 509 GFAPIKPDLSCEETVGEVLDFVLQRLRGILSDSGISYDVLDAVLAVPQGDVLEVRKRAEA 568 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L EF S E ++ R + + + ++ + L EAE+R+Y ++ Sbjct: 569 LQEFKQSEYFEDGMVVFNRCYNLAKKWDNRD------VDEVLLETEAERRVYQWLAQTEP 622 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + E + Y + L ++ FD V++ +D +R NRLSLL+ I ++ L + Sbjct: 623 LLNELKERGEYGEYLITLSKGRAGVDELFDAVMIMAEDPNLRRNRLSLLRRISDLFLNLG 682 Query: 697 NVQKIV 702 + ++V Sbjct: 683 DFSRLV 688 >gi|330823227|ref|YP_004386530.1| glycyl-tRNA synthetase subunit beta [Alicycliphilus denitrificans K601] gi|329308599|gb|AEB83014.1| Glycyl-tRNA synthetase beta subunit [Alicycliphilus denitrificans K601] Length = 721 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 206/748 (27%), Positives = 350/748 (46%), Gaps = 79/748 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L L +G+ Y +P RL +++G+ Sbjct: 5 SNLLVELFVEELPPKALQKLGDAFAGVLRDQLVAQGLAAAGAPLTAYASPRRLAAHIEGV 64 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 + +K + ++L P G A+ L + G + +K+ K +V Sbjct: 65 LAQASDKAVSQKLMPVAVGLAADGQPTPALLKKLSALGADASAVAGLKRVHDGKAEVLYY 124 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + L+ + AI ++P PK MR+ ++ ++RP ++ + A Sbjct: 125 ESTAQGATLAQGLQKALDEAIARLPIPKVMRYQLEDG-WTSVHFVRPAHGLVALHGAG-- 181 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAIL 229 ++ + + + GN T GHRF A P+ ++ D Y L V+ RR I+ Sbjct: 182 ---VVPVAVLGLAAGNATQGHRFEAAVQPVVLRDADSYAEQLRAQGAVIAGFAERRAEIV 238 Query: 230 NDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 A +G +ED LL+E+ LVE V + F++++L +P+E + LT+K NQ Sbjct: 239 RQLRAAAEKLGGGVRPIEDDALLDEVTALVERPNVLVCQFEREFLAVPQECLILTMKANQ 298 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 K F EG L + F++VSNI D GA ++QGN RVV RL DA F+ +D+ Sbjct: 299 KYFPLLDAEGRLTHRFLVVSNISPQDAGA-VIQGNERVVRPRLADAKFFFDQDRK----- 352 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 K L R+A+L VV+H ++G+QGERV R+R + K I Q + A Sbjct: 353 ---------------KTLASRVAQLS--KVVYHNQLGSQGERVERVRAIAKAIGQQLFAA 395 Query: 408 VAL--------------------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE 447 +A VD A +L+K DL T++V EFPELQG +G YAV Sbjct: 396 LAERHELQGTQDGEIAQDWLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGYYAVNDGL 455 Query: 448 NISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRR 507 AIE+H KPR + +P + + V+LADK++TL+ + I P+G +DP+ALRR Sbjct: 456 PDEVAHAIEDHYKPRFAGDELPRENVGLVVALADKIETLVGMFGIGNLPTGDRDPFALRR 515 Query: 508 ATLGIIRIILENKIDIPLSQFIEDQNL-------------ILFFHDRLKLYLHDRDIRHD 554 LG+IR+++E + + L + F +DRL L ++ R Sbjct: 516 HALGVIRMLMEKDLPLDLGALLAGAVPAFAGRIDDPSALLADFIYDRLAGALREQGYRSQ 575 Query: 555 LIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI 614 ++A+L L + + + F + + + + KR+ IL +K ++ + Sbjct: 576 EVDAVLALRPQRLALVEKQLAAVRAFSALPESQALAAANKRVSNIL---KKAGGDVHAHV 632 Query: 615 SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDD 674 +P+ L +AE+ LYA + F + Y L + P++ FFD V+VN + Sbjct: 633 NPELLREQAEQDLYAALQRFVPEADAQFERGDYTASLQTLAVLRAPVDAFFDDVMVNAEQ 692 Query: 675 REVRDNRLSLLQYIKNIILIVINVQKIV 702 ++R NRL LL+ + + V ++ ++ Sbjct: 693 LDLRLNRLGLLKTLHEAMNRVADLSRLA 720 >gi|218767499|ref|YP_002342011.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis Z2491] gi|25009340|sp|Q9JW67|SYGB_NEIMA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|121051507|emb|CAM07800.1| putative glycyl-tRNA synthetase beta subunit [Neisseria meningitidis Z2491] Length = 687 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 213/707 (30%), Positives = 354/707 (50%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEYTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + +L+ ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKLLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 GNKTLGHRFLSDGEITIENADSYAEQMREQGKVVASFAERKAAIQTALEGQARRLNAAVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--GVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+ KDPYALRR+ LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTSDKDPYALRRSALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVASFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L +K + E+ + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL---KKADAELGV-VNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|146276696|ref|YP_001166855.1| glycine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025] gi|145554937|gb|ABP69550.1| Glycine--tRNA ligase [Rhodobacter sphaeroides ATCC 17025] Length = 758 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 256/782 (32%), Positives = 394/782 (50%), Gaps = 107/782 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQARAREDLKKLVTDGLVEAGLTYASAGAFSTPRRLVLSVEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP+ A AI+GFLRSTGL T + ++D KKG V AV+ KP R Sbjct: 61 AESPTLREERKGPKADAPAAAIEGFLRSTGL-TRDQLETRED-KKGAVLFAVVEKPGRRA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ I+ PWPKSMRW T + W+RPL SILC+L +++A +++ + + Sbjct: 119 PDIVAEVLERTIRTFPWPKSMRWGTG-----SLRWVRPLHSILCLL-SDEAGSQVVPVTV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 ++ N T GHRF AP V D Y L+ A+V+LD R AI ++A A A G Sbjct: 173 DQVTAVNTTEGHRFMAPGRFAVTGFDDYRAKLQRALVMLDAAEREQAIWHEATTQAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+V D LL E+ GLVEW V MG +++L LP E+++ +++ +QK F R Sbjct: 233 LEVVPDAGLLAEVAGLVEWPVVLMGPIGEEFLGLPPEVLQTSMREHQKFFSVRNPATGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I++GN++V++ARL DA FW+ D+ + + +A Sbjct: 293 EKFVTVANRETADHGATILKGNAKVLSARLSDASFFWENDRRTVQTVGLEGMAA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + V FH K+G+Q +R++RI L ++IA L+ A L A ++KA Sbjct: 347 ------------GLAHVTFHNKLGSQADRIARIEALAREIAPLVGASPDLAAEAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA A + H +P GP + VPT+ +S+ V+LA Sbjct: 395 DLQSAMVGEFPELQGTMGSYYARAAGLPEPVALACKAHYQPLGPSDAVPTDPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL---- 536 DK+DTL FWAI+EKP+GSKDP+ALRRA LG++R++L N + + L + + L Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVVRLLLMNGLRLSLLNQVRFAHGCLAEQF 514 Query: 537 -----FFHD---------------RLKLYLHDR------DIRHDLIEAI----------- 559 FF R + D+ + +E++ Sbjct: 515 NSRFNFFVQIREEPKEAVNIGVGHRYPEVVSDQCTSILMGYVENPVESVASGKFTIDGRA 574 Query: 560 -----LRPENDNLLTIVD------------LIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 LR +++LL+ ++ + + L KR + A Sbjct: 575 VGTKPLRLLDNDLLSFFHDRLKVHLREQGIRHDVIDACLAMPGNDDLTLLVKRAEALSAF 634 Query: 603 EEKKNR-----------------------EISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + E S P++ +AE+ L+A + I Sbjct: 635 LKTDDGTNLLQGFKRANNILAQAEAKDGVEYSFGADPKFAETDAERALFAALEQAEAAIA 694 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +M + + + ++ PI+ FFD V VN D+ +R NRL++L I+ V ++ Sbjct: 695 PAMQAEDFGAAMAAMAALRAPIDAFFDTVQVNADNPVLRRNRLNMLHSIRATCASVADLT 754 Query: 700 KI 701 +I Sbjct: 755 RI 756 >gi|81428491|ref|YP_395491.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus sakei subsp. sakei 23K] gi|123728652|sp|Q38X99|SYGB_LACSS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|78610133|emb|CAI55182.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus sakei subsp. sakei 23K] Length = 693 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 203/731 (27%), Positives = 345/731 (47%), Gaps = 76/731 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EE+PA + + + L + L+E+ + + ++ Y TP RL + ++ L+ Sbjct: 5 FLLEIGLEEMPAHVVMPSIQQLEKRVRDFLEEQHLEFGQLKTYATPRRLAILIEDLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP G KA GF+R GL T I KG Y+ V + Sbjct: 65 ADIHEEAKGPAKKIALDAEGNWSKAAQGFVRGQGLTTDD---ITFKELKGVEYVYVEKSI 121 Query: 117 -KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +E +L + I + +P M W+ F +IRP+ I+ +L +++ Sbjct: 122 IGKPVEAILPE-LKAVIMAMTFPTRMHWADYD-----FEYIRPIHWIIALL-----DDEV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ID + + G T GHRF + + Y LE V+ D R+N I ++ Sbjct: 171 IDFSILNVTTGRTTQGHRFLG-QEVTLAKATDYEAALEAQFVIADEAKRQNLIQTQIEKM 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++ D +LLEE+ LVEW F G FD KYL +PEE++ ++K NQ+ F R++ Sbjct: 230 AQENDWQVDLDANLLEEVTNLVEWPTAFYGQFDAKYLEIPEEVLITSMKDNQRYFYARSQ 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L FI V N + ++ GN +V+ ARLEDA F+ DQ Sbjct: 290 AGDLLPVFIGVRNGNDA-FMENVIAGNEKVLTARLEDADFFYHEDQKV------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 + + +A+L +V FH KIG+ E+++R+ ++ + + Q A++ + Sbjct: 337 --------TIAENVAKLQ--NVSFHDKIGSLAEKMTRVGLIAQFLGQKFGLSEAELVDLQ 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T +V EF ELQG +G++YA+LQ E + A+ EH P +P K Sbjct: 387 RASDIYKFDLVTGMVGEFAELQGVMGEKYALLQGETPAVATAVREHYMPISAEGALPATK 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + +++ADK D++ +F+A+ PSGS DPYALRR GI+RI+ P++ F Sbjct: 447 VGAVLAIADKFDSMADFFAVGMIPSGSNDPYALRRQAYGIVRILENQDWHFPMADFQAAM 506 Query: 533 NLI-------------------LFFHDRLKLYLHDR--DIRHDLIEAILRPENDNLLTIV 571 + I F DR++ + +R D+++A+L+ + + + + Sbjct: 507 SHIVKQQADFDLDWSANAAAISDFLTDRVRQRFNGMRPKVRRDIVDAVLKNQGQDPVVMF 566 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + K L+ A + + + R+ ++ + + +++ + P +AEK LY + Sbjct: 567 EAAKVLSAHQDDADFKATIEAITRVLRLAEKVDFETTDLT--VDPALFENDAEKALYTAV 624 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D + + Y L ++ IE +FD +V +D VR NRL+ L I I Sbjct: 625 EDLRGATATNTLAENYA----ALQTLRPLIEAYFDATMVMAEDEAVRRNRLTQLMIIAQI 680 Query: 692 ILIVINVQKIV 702 L + ++ +++ Sbjct: 681 ALSLGDLNELI 691 >gi|145638254|ref|ZP_01793864.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] gi|145272583|gb|EDK12490.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae PittII] Length = 639 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 189/654 (28%), Positives = 309/654 (47%), Gaps = 59/654 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL+EI +EE+P + A + + L + G+ + + + P RL + + L+ Sbjct: 5 NFLVEIGTEELPPKALKTLATSFADNVEAELNQAGLSFDKIEWFAAPRRLAVKVLNLATQ 64 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P K E+ GP V A KA +G+ R G+ +I D KG+ + + Sbjct: 65 QPSKEIEKRGPAVSAAFDAEGKPTKAAEGWARGCGITVEQAERIATD--KGEWLIHRAKI 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L IV A+ K+P PK MRW+ +IRP+ ++ +L +++ Sbjct: 123 EGQPTKNLLNDIVANALAKLPIPKPMRWADK-----TVQFIRPVHTVTMLL-----GDEL 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I+ ++ + GHRF ++Q D Y + L E+ V+ D R+ IL + Sbjct: 173 IEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLLCEKGSVVADFNERKAEILAKSQA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+A+G ++ LLEE+ LVE+ V F++++L +P E + T+K +QK F Sbjct: 233 KATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G L FI VSNI D A I++GN +VV RL DA F+K D Sbjct: 293 KDGRLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLTDAEFFFKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L R+ RL+ V+F K+GT ++ RI L +IA+ I AD A RA Sbjct: 338 ------LKQKLVDRLPRLET--VLFQQKLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRA 389 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL T +V EF + QG +G YA E+ A+ E PR + +P + ++ Sbjct: 390 GLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVA 449 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 V+LADK DTL + I + P GS DP+ALRRA LG +RII+E + + L ++ Sbjct: 450 SAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAA 509 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +++ F R + + D I D+I+A+L ++ ++ Sbjct: 510 LFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSH 569 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR-LYAVIS 632 F + E + KR+ ILA + EI+L + K+ L+ + Sbjct: 570 FRTLDSAEALAAANKRVSNILAKADAAIGEINLTACVEPAKKPLLKQCLHYALK 623 >gi|227513298|ref|ZP_03943347.1| glycine--tRNA ligase [Lactobacillus buchneri ATCC 11577] gi|227083499|gb|EEI18811.1| glycine--tRNA ligase [Lactobacillus buchneri ATCC 11577] Length = 693 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 204/733 (27%), Positives = 340/733 (46%), Gaps = 74/733 (10%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI EEIPA + + L LK++ + + ++ + TP RL LY+ GL Sbjct: 1 MANNFLLEIGLEEIPAHVVTPSINQLKKRASDYLKDQRITFDQIKTFSTPRRLTLYITGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P+ + GP G KA GF R G T I KG Y+ V Sbjct: 61 ADKQPDIDKSVKGPAKKIAQDTDGNWTKAAIGFSRGQGATTDD---ITFKEVKGTDYVFV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + D + T + I + +P M+W+ +F ++RP+K ++ +L Sbjct: 118 EKHIAGKSVDEVLTGMKDVITAMTFPTMMKWANY-----SFEYVRPIKWLVALL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I + ++ + GHRF +++ + D Y L + V+ D + R+ I+ Sbjct: 168 DKVIPFTILDVSTDRVISGHRFLGKD-VELANADEYEEKLTQQFVIADAKKRKELIVKQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H++A ++ D DLLEE+ LVEW F G F++KYL +P+E++ ++K +Q+ F Sbjct: 227 HKIAEDNDWQINLDPDLLEEVNNLVEWPTAFAGKFNEKYLKIPDEVLVTSMKDHQRFFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI V N D ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 287 TDGNGTLLPHFISVRNGNDYD-IQNVIAGNEKVLTARLEDAMFFYEEDQK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 K + + + RL V FH KI T E++ R++V+ + + ++ Sbjct: 336 ----------KTIAEDVERLK--KVSFHDKISTMFEKMQRVQVISNYLGKQFGFSDKELE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P Sbjct: 384 DEQRAAEIYKFDLVTGMVGEFAELQGVMGEKYALLNGEAPAVAKAISEHYMPISANGALP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----- 524 + + ++++DKLD+++ F+A PSGS DPYALRR GI+RI+ + K + Sbjct: 444 ASNVGALLAVSDKLDSILTFFAAGMIPSGSNDPYALRRQATGIVRIVADKKWNFDLIDTL 503 Query: 525 ---------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 L Q + + F DR+K YL D IR+D+ +A+ ++L Sbjct: 504 KAIINLQDEKQVAPKLDQAGQITAVSDFIKDRIKQYLDDLGIRYDISDAVTSGSQTDILF 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L E + + S R+ +I K+ + L + E+EK L Sbjct: 564 NISSGQVLQEQKDDDAFKSIIESLTRVLRISKKGHFKDND--LVVDGSLFENESEKVLNQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++ E + + D L + + I +FD +V D ++RDN L L + Sbjct: 622 EVASAAEGYYEISAKEDF----DRLSGLKDAINAYFDATMVMDKDEKLRDNHLRQLTLLS 677 Query: 690 NIILIVINVQKIV 702 ++IL + ++ K+V Sbjct: 678 HLILHLGDLDKLV 690 >gi|313669148|ref|YP_004049432.1| glycyl-tRNA synthetase beta subunit [Neisseria lactamica ST-640] gi|313006610|emb|CBN88076.1| putative glycyl-tRNA synthetase beta subunit [Neisseria lactamica 020-06] Length = 687 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 210/707 (29%), Positives = 347/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGVPTKALEGFARGAGAK-IEDLTIIND-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVEASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 L+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 ILVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|116333401|ref|YP_794928.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus brevis ATCC 367] gi|122269912|sp|Q03SC5|SYGB_LACBA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116098748|gb|ABJ63897.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus brevis ATCC 367] Length = 691 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 216/734 (29%), Positives = 340/734 (46%), Gaps = 77/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EE+PA + A + L LKEE V Y ++ + TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEMPAHVVTPAIKQLVKRTADYLKEERVDYDEIKPFSTPRRLAVLITGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP G KA GF R GL T I KG Y+ V Sbjct: 61 ADKQRDISESVKGPAKKIAQDAEGNWSKAAIGFTRGQGLTTDD---ITFKEIKGTEYVYV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + VL + I + +P M+WST H F +IRP++ ++ +L A+ Sbjct: 118 DKFIAGEPVATVLAG-LKDVITAMTFPTMMKWSTHH-----FQYIRPIRWLVALLDAD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I + ++ T GHRF I + + Y DL V+ D + R++ I Sbjct: 170 ---VIPFSILDVTTDRNTRGHRFLGKD-ISIATAADYEGDLTSEFVIADADKRKSMIKTQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +LA+ G + D LLEE+ LVEW F GSFD+KYL +PEE++ +++ +Q+ F Sbjct: 226 IDKLAADHGWTVNVDAGLLEEVNNLVEWPTAFAGSFDEKYLTIPEEVLITSMRDHQRFFY 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R +G L FI V N D +V GN +V+ ARLEDA+ F+ DQ Sbjct: 286 ARDAQGQLLPTFISVRNGNDHD-LQNVVSGNEKVLTARLEDAMFFYTEDQK--------- 335 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 K + + RL V FH KI T E++SR++ + +A+ + A Sbjct: 336 -----------KTIADYVERLKT--VSFHDKISTMAEKMSRVKAIAGVLAKHVGLNDAQT 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 V RA + K DL T +V EF ELQG +G++YA+LQ E+ + AI EH +P + Sbjct: 383 KAVLRASEIYKFDLVTGMVGEFAELQGVMGEKYALLQGEDPAVAQAIREHYEPISADGAL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP---- 524 P + ++LADK D+++ F+A PSGS DPYALRR GI+RI + + +P Sbjct: 443 PASVPGAVLALADKFDSILTFFAAGMIPSGSNDPYALRRQATGIVRIAQDQQWSLPVADL 502 Query: 525 ----------------LSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 L Q + L+ F DR++ L RHD+I+A+ + ++L Sbjct: 503 AQAFVAAETTANVAPKLDQAGQIDALVNFIKDRIRKILRSAKQRHDIIDAVTAGSSSDVL 562 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I L A + + S R+ ++ + + + P ++E +L+ Sbjct: 563 QIFTAADILASHADDANFKDVIESLTRVIRLAQKAPAE--VAATTVDPALFENDSEGQLH 620 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 ++ T ++ + + L I I +FD +V D VR+NRL+ L + Sbjct: 621 QGVATVATAAKDGL-----TALYTALADIQPVIAAYFDATMVMAKDDAVRNNRLAELSRL 675 Query: 689 KNIILIVINVQKIV 702 ++ L + ++ ++V Sbjct: 676 ADLALALGDLDQLV 689 >gi|120612814|ref|YP_972492.1| glycine--tRNA ligase [Acidovorax citrulli AAC00-1] gi|229470691|sp|A1TUT0|SYGB_ACIAC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120591278|gb|ABM34718.1| glycyl-tRNA synthetase beta chain [Acidovorax citrulli AAC00-1] Length = 708 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 215/735 (29%), Positives = 361/735 (49%), Gaps = 66/735 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 P+ L+E++ EE+P + K + + +L+ L+ +G+ + Y +P RL ++ + Sbjct: 4 PNLLVELFVEELPPKALQKLGDAFAGVLLAQLQAQGLASAASRVTAYASPRRLAAHVTEV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLA 111 +P + +K + ++L P G A+ L + G + +++ P K + Sbjct: 64 APQAADKAVSQKLMPVTVGLDASGNATPALLKKLAALGADASAVPGLRRAPDGKAEALFL 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW----STTHSPISAFSWIRPLKSILCILV 167 + + L+ + ++ K+P PK MR+ ++ S++RP ++ + Sbjct: 124 DSTVRGATLSEGLQKALQESVAKLPIPKVMRYQLSSGCEQPGWTSVSFVRPAHGLVALHG 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRR 225 E ++ + + + GN T+GHRF A P+ ++S D Y + L EE V+ RR Sbjct: 184 TEV----LLSVSVLGLTAGNATHGHRFEAAVDPVVIRSADTYAQQLAEEGAVIAAFADRR 239 Query: 226 NAILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I A VG ++D LL+E+ LVE V + F+K++L +P+E + LT+ Sbjct: 240 AEIARQLQAAAEQVGGGVRPIQDDALLDEVTALVERPNVLVCEFEKQFLDVPQECLILTM 299 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F EG L + F++VSNI+ D +A+V GN RVV RL DA F+ +D+ Sbjct: 300 KANQKYFPLLDAEGRLTHRFLVVSNIRPDDA-SAVVGGNERVVRPRLADAKFFFDQDRK- 357 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K L+ R+A L VV+H ++GTQGERV R+R + + IAQ Sbjct: 358 -------------------KTLESRVASL--AKVVYHNQLGTQGERVERVRAIARAIAQQ 396 Query: 404 IDADVALV---DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 I DV L D+A L+KADL T++V EFPELQG +G+ YA DAIE+H K Sbjct: 397 IG-DVELARQADQAAQLAKADLVTDMVGEFPELQGTMGRYYAQADGLPAEVADAIEDHYK 455 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E + Sbjct: 456 PRFAGDTLPRGDVGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKE 515 Query: 521 IDIPLSQFIE-------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + + L + +L F +DRL L ++ ++A+L L Sbjct: 516 LPLDLETLLHSALPAFGDKIQDPTASLADFIYDRLAGSLREQGYSAQEVDAVLALRPQRL 575 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + F + + + KR+ IL KK ++ ++P L +AEK L Sbjct: 576 ALVGKQLAAVRAFAALPEAPALAAANKRVTNIL----KKAGDVDAHVNPDLLREQAEKDL 631 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 YA + F Y L + P++ FFD V+VN ++ ++R NR LLQ Sbjct: 632 YAALQRFVPEADALFAAGDYTGSLQTLAVLRAPVDAFFDDVMVNAEELDLRLNRQGLLQS 691 Query: 688 IKNIILIVINVQKIV 702 + + V ++ ++ Sbjct: 692 LHVAMNRVADLSRLA 706 >gi|240013283|ref|ZP_04720196.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI18] gi|240120355|ref|ZP_04733317.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID24-1] Length = 687 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 209/707 (29%), Positives = 348/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIIHDGRQ-DVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +A+E+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADI 682 >gi|108762825|ref|YP_631304.1| glycyl-tRNA synthetase subunit beta [Myxococcus xanthus DK 1622] gi|122389055|sp|Q1D7R9|SYGB_MYXXD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|108466705|gb|ABF91890.1| glycyl-tRNA synthetase, beta subunit [Myxococcus xanthus DK 1622] Length = 703 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 208/734 (28%), Positives = 359/734 (48%), Gaps = 72/734 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLE+ +EEIPA A +DL ++ + + + + +R + TP RL +++K + Sbjct: 1 MARDLLLEVGAEEIPASFIGPALDDLKRVITERMADARLKHGEVRTFGTPRRLAVWVKDV 60 Query: 60 SPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + I+E LGP A KA + F S L D + KG+ A Sbjct: 61 ADAGEDIIKEVLGPSAKAAFDAQGKPTKAAEKFAESLKLAV--DQLGRATTAKGEYLSAR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + R D+LK + A+ + + KSMRW + S+ RP++ ++ +L ++ Sbjct: 119 VEEKGRPAADILKDTLHAAVHGINFRKSMRWGDVDT-----SFARPVQWLVALLGSD--- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ + ++ G T GHRF +P I++++ Y LE+A V+ D RR ++ Sbjct: 171 --VLPVVFGDVTSGRTTRGHRFLSPDAIELKAPAEYEVALEKAHVVADITKRRAQLVEKV 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 AS G +L+ED+ L++++ LVE +G+F++++L LP E++ +K++Q+ F Sbjct: 229 RAAASKAGAQLLEDESLVDQVTNLVELPSPVVGTFEERHLDLPPEVLVQEMKSHQRYFSL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI VSN D + ++G RV+ ARL D F+ D+ Sbjct: 289 VDSAGKLQPKFIAVSNTPVRDEQLS-LRGYQRVLRARLADGRFFFDEDRK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVAL 410 PL R+ +L VV+ ++G+ E+V R R L + Q + A Sbjct: 338 ----------TPLIDRVEKLGR--VVWQGQLGSYLEKVERFRTLAVWLGQEAGRAGEAAT 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA L+KADL T +V EFPELQG +G+EYA E + AI EH PRG + +PT Sbjct: 386 IERAATLAKADLVTGMVGEFPELQGIMGREYARAGGEPDAVALAIAEHYLPRGAEDALPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +AD+LD+L +AI + P+G+ DP+ALRRA + IIR++L LS ++ Sbjct: 446 QDPGALIGIADRLDSLCGIFAIGKAPTGAADPFALRRACIAIIRLVLGRGYRFSLSAAVD 505 Query: 531 ----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++ FF RLK ++ R D++EA+L D+L+ Sbjct: 506 ESLRLLAPKIANAKRKAGEPAPREQVLEFFRGRLKALWGEQH-RTDVVEAVLSAGFDDLV 564 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRL 627 ++ L+ A + ++ KR+ I+ EK+ R++ E +PQ L+ E E+ L Sbjct: 565 AAQKRLEALSHIVGRADFQPLAVAFKRVVNIV---EKQGRDVQGGETNPQKLVDEPERNL 621 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + + + + + + + ++ FFD+V+V +D+ +R+NR+ LL Sbjct: 622 HTAFTQARSTVSGLVRVDDFSGALREITGLKPAVDTFFDKVMVMAEDKALRENRIRLLVE 681 Query: 688 IKNIILIVINVQKI 701 I + V + KI Sbjct: 682 IGALFNQVADFSKI 695 >gi|332709830|ref|ZP_08429787.1| glycyl-tRNA synthetase beta chain [Lyngbya majuscula 3L] gi|332351428|gb|EGJ31011.1| glycyl-tRNA synthetase beta chain [Lyngbya majuscula 3L] Length = 729 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 195/729 (26%), Positives = 325/729 (44%), Gaps = 86/729 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + L E + + + Y TP RL + +KGL Sbjct: 10 MSTFLLEVGTEELPADFVDSAIAQWQSRIPQTLDEYFLTPEGIEIYGTPRRLAVIIKGLP 69 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A KA GF R G++ D +D KG+ + Sbjct: 70 QKQPDREEEVKGPPAKAAFKDGQPTKAAIGFARKQGVEV--DNLFLRDTAKGEFVFVQKQ 127 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L ++P I + + MRW+ + RP++ ++ +L + Sbjct: 128 ISGRPATEILTELIPQWIFGLEGRRFMRWANGD-----LKFPRPIRWLVTLL-----DDV 177 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ ++L I I+ GHR +P P+++ Y L A V ++PE RR I + Sbjct: 178 VLPVELDNNAEIIKSDRISSGHRILSPKPVEIPQATDYQSYLRNAYVEVNPEARRETIKS 237 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A +G +L EE+ LVEW +G F ++L LP+E++ + ++Q+ F Sbjct: 238 QVESAAKQLGGYTPLYPELWEEVTNLVEWPTAVVGKFSSEFLNLPQEVVTTEMVSHQRYF 297 Query: 291 VTRTRE--GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 E L FI + N + I GN RV+ ARL D F+K D + Sbjct: 298 PVFKTEAATELIPYFITIGNGDPA-KSEIIATGNERVIRARLADGQFFYKTDID------ 350 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---- 404 PL+ + +L+ V F +G+ ++V RI + +I + Sbjct: 351 --------------SPLESYLPQLE--KVTFQKDLGSVRQKVGRIEKIASQITDQLRQHS 394 Query: 405 -----DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 + + RA +L KADL T++V EFPELQG +G++YAV E+ AI EH Sbjct: 395 PNLISPEAITQIQRAALLCKADLVTQMVYEFPELQGVMGQKYAVTSGESEQVATAIFEHY 454 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 PRG + +P V LAD+LDTL++ + + P+GS DP+ALRRA GII I + Sbjct: 455 LPRGAGDALPQTLTGQVVGLADRLDTLVSIFGLGMLPTGSSDPFALRRAANGIINITWDA 514 Query: 520 KIDIPLSQFIED----------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILRP 562 + I L Q ++D ++L FF R++ L + + I +DL+ A+L Sbjct: 515 NLPINLQQLLQDIAADFVAAYPDKNSPIESLQEFFLQRIRTLLQEENKIDYDLVNAVLGE 574 Query: 563 END--------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SL 612 ++ ++L + D L + +K + R ++ + +E+ + Sbjct: 575 DDPEYQNRALIDVLDVRDRALFLQSIRDNGTLDKIYETVNRSARLAKQGDLDTKELQPTT 634 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 ++P+Y E+ Y + + I+ S + + Y ++ + L I + FFD VL Sbjct: 635 VVTPEYFQKSCEQAFYDALVELVPKIKASQEERDYQKLVEALEQIAPTVSTFFDGDQSVL 694 Query: 670 VNVDDREVR 678 V D +R Sbjct: 695 VMDPDPNIR 703 >gi|312898538|ref|ZP_07757928.1| glycyl-tRNA synthetase, beta subunit [Megasphaera micronuciformis F0359] gi|310620457|gb|EFQ04027.1| glycyl-tRNA synthetase, beta subunit [Megasphaera micronuciformis F0359] Length = 682 Score = 690 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 194/727 (26%), Positives = 324/727 (44%), Gaps = 72/727 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EEIPA A + L + + + Y+++R TP RL L + GL Sbjct: 1 MSKDLLLEIGTEEIPAHYMPSALKQLHEGAADIFAKNHLDYKDIRTVGTPRRLALLVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + + GP V G +A GF R + + G VY V Sbjct: 61 AEKQADVSSKNKGPSVKIAFDADGNPTQAAMGFARGQHIDVSELV-----TEDGYVYADV 115 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +L I+ + + +PKSM W ++RPL+ + + E Sbjct: 116 TVA-GSETKALLPEIMKRLVSSLAFPKSMTWGNED-----MRFVRPLRWFVALFGTE--- 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++ ++ + G T GHRF +Q+ Y+ L E +++DPE RR+ I+N Sbjct: 167 --VVPFEMAHVVSGRTTRGHRFLGTGDFDIQAPGEYVDLLREHYIIVDPEERRDMIVNGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A G +V D++LLEE++ LVE+ G FD YL LPE + +K +Q+ F Sbjct: 225 HAVAKKQGGHVVMDEELLEEVVYLVEYPTPLYGCFDTDYLELPEAAVITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R E L N F+ V N + GN RV+ ARL+DA F+ D+ Sbjct: 285 RDSEDRLMNMFLTVRNGD-DYHLDTVRHGNERVLRARLDDAKFFFAEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVAL 410 K L R L +VF +GT ++ R+ + + +D + Sbjct: 334 ----------KSLADRTEDLKR--IVFQDGLGTLFDKSQRLAAIMTFLTAKLDLPVEEGE 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + L+K DL T++V+EF ELQG +G+EYA+L E +A+ E PR + +P Sbjct: 382 IKHLADLAKTDLLTQMVQEFTELQGVMGREYALLDGEEPETAEAVFEQYLPRFAGDELPH 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + +SLADK DT+ +++ P+GS+DP+ALRR T+G++ I+++ +I + Sbjct: 442 TTLGLLLSLADKFDTITGSFSLGLIPTGSQDPFALRRQTIGVLNILIDAGWNINCDEVFA 501 Query: 531 D----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +L +F RLK L D + +I+ +L+ ++ N IV Sbjct: 502 YILEVLGTDRNKREDVIASLHDYFALRLKNILQDAGFDYHIIDCVLQGDSMNAAEIVKRA 561 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L + + E+ L + R+ ++ + + ++ E EK LYA Sbjct: 562 TALRD-SEFSTQEELLQAYTRVANMVKDAQ------NTDVDDTLFETEEEKALYAACLAV 614 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + ++ Y ++L I F D VLV + V++NR++LL +I Sbjct: 615 EAELPQAYAVYDYRCAVEILGRAVSAINNFLDNVLVMHEKEAVKNNRMNLLTRTLGLISP 674 Query: 695 VINVQKI 701 V +++K+ Sbjct: 675 VGDIKKL 681 >gi|209524276|ref|ZP_03272826.1| glycyl-tRNA synthetase, beta subunit [Arthrospira maxima CS-328] gi|209495367|gb|EDZ95672.1| glycyl-tRNA synthetase, beta subunit [Arthrospira maxima CS-328] Length = 713 Score = 690 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 206/717 (28%), Positives = 342/717 (47%), Gaps = 71/717 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A ++ LKE+ + ++++ Y TP RL + + GL Sbjct: 1 MPSFLLEVGTEELPATFVEGAIAQWEAMIPASLKEQYLTCESVKVYATPRRLAVVIAGLP 60 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A KA +GF + + + D +I+ P KGD + + Sbjct: 61 QQQPDREEEIKGPPASAAFKDGKPTKAAEGFAKKQNIN-LEDIEIRPTP-KGDFVFVLKQ 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R ++L ++P I ++ + MRW + RP++ ++ +L E Sbjct: 119 IPGRKTSEILTELIPQWINRLEGKRFMRWGDGD-----IRFPRPIRWLVALLDKEILPLS 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I + I + GHR + + + Y L +A V +DP+ R+ AI N Sbjct: 174 -IPNGSETISSDRHSQGHRVLHSNSVSIAEATDYAETLGKAFVEVDPQTRKTAIANQVKV 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A++VG E ++LL E++ LVEW +G+FD +L LP E+I++ + T+Q+ F Sbjct: 233 AANSVGGEAEIPEELLNEVVNLVEWPTAVVGTFDADFLVLPPEVIKMVMVTHQRYFPVLD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI +SN + A I GN RV+ ARL D F+K D Sbjct: 293 THGNLKPYFITISNGDPAKA-AIIASGNERVIRARLADGEFFYKTD-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 L KPL+ + L+ +V F +G+ ++V+RI +I + ++ ++A + Sbjct: 338 ------LKKPLENYLPDLE--NVTFQEDLGSVRDKVNRIIANADRIGKQLEVREGELAQI 389 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +L KADL +++V EFPEL+G +G++YA+ E + AI EH P+G + +PTN Sbjct: 390 KRAALLCKADLVSQMVYEFPELEGIMGEKYALAGGEPEAIAKAIVEHYLPKGASDRLPTN 449 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 IS V+LADKLDTL++ + + P+GS DP+ALRRA G++ II + + L + ++D Sbjct: 450 IISQVVALADKLDTLVSIFGLGMLPTGSSDPFALRRAANGVVNIIWSADLPLNLHELLKD 509 Query: 532 -----------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILRPEN--------D 565 +L FF R++ L D I +DL+ A+L E+ Sbjct: 510 LTTDFVNSHPNAMLGLIHHLEDFFLQRIRTLLQDEKAIDYDLVNAVLGDEDIEYKERALQ 569 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI--SLEISPQYLLLEA 623 +LL + D L E + + R ++ + E+ I+P + Sbjct: 570 DLLDVRDRALFLQEIRGDGTLDIIYETINRSTRLAKQGDLDTGELQPHAVINPSLFEKYS 629 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 E+ + D + Q +++ + Y Q+ L +I + FFD VLV + +V Sbjct: 630 EQAFMEALEDLIPNTQAALETRNYRQLVTALAAIVPTVTQFFDGENSVLVMDSNPKV 686 >gi|158521723|ref|YP_001529593.1| glycyl-tRNA synthetase, beta subunit [Desulfococcus oleovorans Hxd3] gi|158510549|gb|ABW67516.1| glycyl-tRNA synthetase, beta subunit [Desulfococcus oleovorans Hxd3] Length = 702 Score = 690 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 202/731 (27%), Positives = 338/731 (46%), Gaps = 67/731 (9%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L EI +EE+PA A L+ L+ L E V R + TP RL + ++ Sbjct: 1 MKNDTLLFEIGTEELPAGYIEPALAALANTLVRKLTEARVACGTARTFGTPRRLAVIIED 60 Query: 59 LSPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ E GP G A F G+ + ++ + KG+ A Sbjct: 61 VAGKQETVTTELTGPPRSVGMDENGRFTLAAKKFAEKAGVALKAVKVVRTE--KGEYLAA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + L +LKT++P I +P+PK+M+W+ + ++ RP+ S+ +L Sbjct: 119 RKVEKGVLTSRILKTVLPQVITSLPFPKTMKWADRNE-----TFARPVHSLTVLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + ++ L I GH F P P+ + D Y+ + VL+D R+ A+ + Sbjct: 169 GKSVVRLSWAGISSNRNCMGHSFMHPAPVSISHPDAYVEQMRRHFVLVDTAERKAAVRRE 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A A+G EL+ D++L++ + LVE+ G FD+K+L LP+E++ +++++QK F Sbjct: 229 IGQAAIALGGELLPDEELVDVVTNLVEYPVASAGRFDEKFLALPKEVLITSMRSHQKYFA 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++ L CF+ V+N + SD + G+ RV+ ARLEDA+ F+++D Sbjct: 289 VTDKKKNLMPCFVAVNNTKVSD-IDVVTTGHQRVLRARLEDAMFFYQKD----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID----AD 407 L PLDQR+ D+ VVF A++GT E+ RI LG +A D A Sbjct: 337 ---------LQAPLDQRVP--DLARVVFQARLGTLLEKTQRIEQLGLMLAGQADPGNTAT 385 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V RA L KADL T V EFP+LQG +G+ +A E + AIEEH +P + Sbjct: 386 GQTVVRAATLCKADLVTHTVIEFPKLQGVMGRVFARASGEPEAVARAIEEHYQPLYAGAD 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + +++ADK+D++ +A+ PSG+ DPYALRR +G+I+I+L + I LS+ Sbjct: 446 LPESLAGALLAVADKIDSICGCFAVGLVPSGASDPYALRRQGIGLIQILLSHNIGASLSR 505 Query: 528 FIEDQNLI-----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 I+ LF R+ L D + D+ A+L D++ Sbjct: 506 IIQAAMAPFASVSTEPVQAAADGVSLFLRGRMAQMLVDDGVPRDVATAVLNASADHVPDA 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L E + KR+ I+ + K EI+ E++ AE L Sbjct: 566 WKRSRALAAVKPLPDFEPIAAAFKRVANIIKKADPK--EIAGEVNSDLFEAPAESTLLDA 623 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +++ + Y + + + ++ FFD+VLV D R NRL+LL + + Sbjct: 624 CQAVKIKMDDALARQDYSRALTEIADLRSVVDTFFDEVLVMAKDSGRRRNRLALLSRVNS 683 Query: 691 IILIVINVQKI 701 + + + Sbjct: 684 LFKGFADFSAL 694 >gi|148557751|ref|YP_001265333.1| glycine--tRNA ligase [Sphingomonas wittichii RW1] gi|148502941|gb|ABQ71195.1| Glycine--tRNA ligase [Sphingomonas wittichii RW1] Length = 677 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 257/716 (35%), Positives = 362/716 (50%), Gaps = 56/716 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ SEEIPARMQ KA+ DL+ + L + G+ + Y TP RL L GL Sbjct: 1 MADFLLELLSEEIPARMQEKASADLARLFTEELAKAGLTPDGITSYVTPRRLALIAHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GP+ A +A++GFLR TGL +++D AV+ KP R Sbjct: 61 VETAAVSEELKGPKASAPPQALEGFLRKTGLTREQ--LVERDG----TLFAVIEKPGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL +P ++ PWPKSMRW T +A W+RPL+ I+ +L E+I+ ++ Sbjct: 115 AAVLAEAIPAIVRNFPWPKSMRWGTASLSTAALRWVRPLQGIVALL-----GEEIVPFEI 169 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G T GHRFH P I + S Y L V++D RR+ I A LA+ G Sbjct: 170 DGVASGAATVGHRFHHPGIITIGSAADYAGKLRACHVIVDHAERRDIIRARAAELAAGQG 229 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + ++ D+ L+ E GL EW +G FD +L +P E+I+LT++TNQK FV EG LA Sbjct: 230 MTVIPDEGLVAENAGLTEWPVPLLGHFDPAFLEVPREVIQLTLRTNQKYFVLNDAEGKLA 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI A DGGAAIV GN +V+AARL DA FW++D Sbjct: 290 PAFICTANISARDGGAAIVAGNGKVLAARLSDAKFFWEQD-------------------- 329 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVALVDRAIVLS 418 L PLD + +L+ ++F+ +GT E+ RI L IAQ + D RA +L+ Sbjct: 330 LKVPLDDYLPKLEA--MLFYEGMGTLREKADRIAALAAWIAQAYFPERDPETARRAGLLA 387 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T +V EFPELQG +G YA + E A+++ I V+ Sbjct: 388 KADLATAMVGEFPELQGVMGGYYAEKRGEKPGTVSALKQQYV------AAVEGCIPACVA 441 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LAD++DTL+ F+A KP+GSKDP+ALRRA L I+ IL N + L IE Sbjct: 442 LADRIDTLVAFFARGIKPTGSKDPFALRRAALQTIQTILVNGTRMNLLATIEQAKTGLGA 501 Query: 532 -----QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAK 585 L+ FF DRLK+ + +RHDLI+A+ D+L+ ++ +K L F + Sbjct: 502 SGLDSAELLDFFADRLKVQQREAGVRHDLIDAVFALGGEDDLVRLLARVKALQAFVETED 561 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 G L KR IL E S P Y AE L A + +++ + Sbjct: 562 GANLLAGYKRAANILRKEGGVPEGASAT--PDYQPEVAESALIAALDAAEPKAAAAVEAE 619 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ PI+ FFDQV+VN R+ RL+LL+ I+ + V + I Sbjct: 620 DFAGAMAALATLRGPIDAFFDQVIVNDSSSSKRNTRLALLEKIRVAVHNVADFSNI 675 >gi|187922692|ref|YP_001894334.1| glycyl-tRNA synthetase subunit beta [Burkholderia phytofirmans PsJN] gi|187713886|gb|ACD15110.1| glycyl-tRNA synthetase, beta subunit [Burkholderia phytofirmans PsJN] Length = 699 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 212/716 (29%), Positives = 344/716 (48%), Gaps = 63/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + Y TP RL + +K + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELSFERYATPRRLAVTIKNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P + G + L + G +++D + +D K + + P + D Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVNDLERAQD-GKAEAFFLRYAAPGATLAD 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L++ + + K+P PK M + + ++RP + + E+++ + Sbjct: 138 GLQSALDETLAKLPIPKVMTYQRPDG--TNVQFVRPAHRLTAL-----HGEQVVPVSALG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 I + T GHRF + +++Q D Y L + V+ + R+ I H LA A G Sbjct: 191 IDADDTTLGHRFLSEGFVQIQHADTYAETLLHKGHVVANFADRKETIRT--HLLAQADGD 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++V + LL+E+ LVEW V+ F ++L +P+E + LT++TNQK F G L + Sbjct: 249 QVVMPESLLDEVTSLVEWPVVYACRFGDEFLQVPQECLILTMQTNQKYFALTDANGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ S G IV+GN RVV RL DA F+++D+ Sbjct: 309 RFLIVSNIETSTPGD-IVEGNERVVRPRLADAKFFFEQDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 KPL R+ L +VV+H K+G+ +RV R+ L IA+LI ADVAL RA L+KAD Sbjct: 349 -KPLADRVPLL--ANVVYHNKLGSALQRVERVEALAGAIAELIGADVALAKRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +PT V+LAD Sbjct: 406 LITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPTTATGTVVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------- 528 KL+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + L + Sbjct: 466 KLETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPVDLVELLRTAHAQFAAVPN 525 Query: 529 --IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Q + F DRL+ L +R I+A+L L IV + + EF + + Sbjct: 526 VTDSTQAIYEFSMDRLRGLLRERGYAPGEIDAVLALNPTRLDDIVARLDAVREFAALPEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KRI IL +K + + L AEK LYA + +Q + + Sbjct: 586 ASLAAANKRISNIL---KKSEGAATGGVQVALLTEAAEKALYAQLEQVAPRVQSQLAARD 642 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 643 YTGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRLA 698 >gi|238926230|ref|ZP_04657990.1| glycine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238885910|gb|EEQ49548.1| glycine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 682 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 211/729 (28%), Positives = 329/729 (45%), Gaps = 81/729 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA + EDL+ + +LKE + + +R TP R L + GL+ Sbjct: 4 DLLLEIGTEEIPAHVMPHLLEDLAQLAETMLKEHRLSCEKVRTLGTPRRAALIVTGLAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP V G KA GF R G+ + Q + G VY A + + Sbjct: 64 QEDVNTETRGPSVAIAFDSDGNPTKAGAGFARGQGVDPSALIQ-----RDGYVY-ASVHE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L +++P ++ +P P SMRW F +IRP++ + + E I Sbjct: 118 SGAATAELLTSLLPDLVRAIPLPNSMRWGDLD-----FRFIRPIRWFVALYGTE-----I 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L + GN + GHR AP + S Y E+A +++DPE RR I Sbjct: 168 VPFALAGVTSGNHSRGHRTLAPADFVITSAADYEAACEKAYIIVDPERRRAMICEQIAET 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 288 DGSLLPVFITVRNGG-KEHLDIVAHGNERVLRARLADAQFFFDEDRR------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALV--- 411 K L + +L VVF +G+ E+ R+ L I + + + D A Sbjct: 334 -------KSLAEHREKLKT--VVFQQGLGSMYEKTERLMALTTAIVEEMAEGDAADAVLA 384 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSKADL T +V EF ELQG +G+EYA+L E+ + AI+E PR + +P Sbjct: 385 GAQRAAKLSKADLVTGMVTEFTELQGIMGREYAMLDGEDPAVARAIDEQYMPRFAGDELP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK--------- 520 + +S ADK+D ++ ++ P+GS+DP+ALRR LG++ +++E K Sbjct: 445 QTPLGFALSAADKVDNIVGTFSQGRIPTGSQDPFALRRQALGLVLMLIEQKSTMLLSDLV 504 Query: 521 ------IDIPLSQFIEDQNLI-LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 D+ +S + Q + F RLK L +R +R+D+ EA+L + D + + Sbjct: 505 DEACDLYDLDVSLCQKMQVYVADFIRLRLKNVLTERGVRYDVQEAVL-EDVDFVADVPVR 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ +S + + S R+ I + P E E L + Sbjct: 564 AAYVERLLASDGADALVQSFVRVGNIAR------GVTGGAVDPALFQAEEEGALLSAYQT 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 E ++ + I FFD V+V D +++NRLSLL+ I + +L Sbjct: 618 AAAARAEG------EDTLPAERALGKAINAFFDAVMVMDKDVRIKENRLSLLKMIDDYLL 671 Query: 694 IVINVQKIV 702 + KIV Sbjct: 672 ETADYSKIV 680 >gi|225848493|ref|YP_002728656.1| glycyl-tRNA synthetase subunit beta [Sulfurihydrogenibium azorense Az-Fu1] gi|225643863|gb|ACN98913.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 677 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 205/717 (28%), Positives = 354/717 (49%), Gaps = 57/717 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKE--EGVIYQNMRQYWTPHRLFLYLKG 58 M +LLEI EE+P ++ + L + KE E N++ + TP RL + +K Sbjct: 1 MKTYLLEIGCEELPPKVILTYKDFLKQYVEESFKEFFEYDSPDNIKVFATPRRLAVLIKN 60 Query: 59 LSPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P K + LGP KA F + + + +I+ + KG+ A Sbjct: 61 LREKQPPKQQVILGPPYKVAVDQEGKFTKAALSFAQKNNIPLENLQKIQNE--KGEYLGA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V+ + + ++ + ++P + P KSM W+ S + + RP++ ++ +L Sbjct: 119 VILQEGKDLKHHIMEVIPTLFKSFPQLKSMVWND-----SGYRFPRPIRWVVSLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 +++I + + T+ HRF ++ + Y + ++ + E R+N Sbjct: 169 DDEVIPFSVAGVNADRYTHLHRFMTAPVGRGEKKQINHSNEYEEITKLGFIIANFEDRKN 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 AI A ++ +++ED+DLL+EI L E+ +G F +YL LP+E+I K + Sbjct: 229 AIKTQYEGFARSLDAQIIEDQDLLDEITCLTEFPVGIVGDFSPEYLILPDEVIITVCKHH 288 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ + ++G L F+ SN+ D I G +V+ ARLEDAL F+K D Sbjct: 289 QRY-LNFKKDGKLIPKFLAFSNVAVKD-RDVIKNGYEKVLKARLEDALFFYKED------ 340 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 L + L+ + +L + FH K+G+ ++V R L K IA+ I Sbjct: 341 --------------LKQKLEDNVEKLK--GIQFHEKLGSLYDKVIRNLDLAKIIAKEIGY 384 Query: 407 -DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D ++RA++LSKADL T +V+EF ELQG +G YA+ Q E+ AI EH P+ Sbjct: 385 TDETKIERAVLLSKADLLTNMVKEFDELQGIMGMYYALKQGEDREVAKAIYEHYLPKTAD 444 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +++P + ++LADK+DT+++F++I E P S DP+A+RR +GI+R+++E +IDI L Sbjct: 445 DDLPQTTLGTILALADKIDTVVSFFSIGEIPKASADPFAVRRNAIGIVRLLVEKEIDIDL 504 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 S+ I+D+ ++ F RL+ YL + R D+I A+L ++ NL +K L + + Sbjct: 505 SKIIKDEKVLDFLLGRLESYLQSKGYRTDIINAVLSLKDANLYRNYLKVKALTKIINLPD 564 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E + KR+ I+ + + L EK+LY +S + ++ K Sbjct: 565 YESVIQVFKRVGNIIPEG------FTGCVDQTLLENPYEKQLYDKVSVVKDEYLKLIESK 618 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L + I+ FFD V++ V+D +++ NRLSLL+ I ++ + + KIV Sbjct: 619 DYEGALGKLIELKPYIDKFFDNVMIMVEDEKIKQNRLSLLKQINDLFRYLGDFTKIV 675 >gi|326318832|ref|YP_004236504.1| glycyl-tRNA synthetase subunit beta [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375668|gb|ADX47937.1| glycyl-tRNA synthetase, beta subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 708 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 212/734 (28%), Positives = 355/734 (48%), Gaps = 64/734 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 P+ L+E++ EE+P + K + + +L+ L+ +G+ + Y +P RL ++ + Sbjct: 4 PNLLVELFVEELPPKALQKLGDAFAGVLLAQLQAQGLASAASRVTAYASPRRLAAHITEV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLA 111 +P + +K + ++L P G A+ L + G + +++ P K + Sbjct: 64 APQAADKAVSQKLMPVTVGLDASGHATPALLKKLAALGADASAVPGLRRAPDGKAEALFL 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW----STTHSPISAFSWIRPLKSILCILV 167 + + L+ + ++ K+P PK MR+ ++ S++RP ++ + Sbjct: 124 DSTVRGATLSEGLQKALQESVAKLPIPKVMRYQLSSGCEQPGWTSVSFVRPAHGLVALHG 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRR 225 E ++ + + + GN T+GHRF A P+ ++S D Y + L EE V+ RR Sbjct: 184 TEV----LLSVSVLGLTAGNATHGHRFEADVDPVVIRSADTYAQQLAEEGAVIAAFADRR 239 Query: 226 NAILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I A VG +ED LL+E+ LVE V + F+K++L +P+E + LT+ Sbjct: 240 AEIARQLQAAAERVGGGVRPIEDDALLDEVTALVERPNVLVCEFEKQFLDVPQECLILTM 299 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F EG L + F++VSNI+ D +A+V GN RVV RL DA F+ +D+ Sbjct: 300 KANQKYFPLLDAEGRLTHRFLVVSNIRPDDA-SAVVGGNERVVRPRLADAKFFFDQDRK- 357 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K L+ R+A L VV+H ++GTQGERV R+R + + IAQ Sbjct: 358 -------------------KTLESRVASLSR--VVYHNQLGTQGERVERVRAIARAIAQQ 396 Query: 404 ID--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 I D+A L+KADL T++V EFPELQG +G+ YA DAIE+H KP Sbjct: 397 IGDVELARHADQAAQLAKADLVTDMVGEFPELQGTMGRYYAQADGLPAEVADAIEDHYKP 456 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E ++ Sbjct: 457 RFAGDTLPRGDAGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKEL 516 Query: 522 DIPLSQFIEDQNL-------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + L + F +DRL L ++ ++A+L L Sbjct: 517 PLDLETLLHSALPAFGDKIQDPTAPLADFIYDRLAGSLREQGYSAQEVDAVLALRPQRLA 576 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + F + + + KR+ IL KK ++ ++P L +AEK LY Sbjct: 577 LVAKQLAAVRAFAALPEAPALAAANKRVTNIL----KKAGDVDAHVNPDLLREQAEKDLY 632 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + F Y L + P++ FFD V+VN ++ ++R NR LLQ + Sbjct: 633 AALQRFVPEADALFAAGDYTASLQTLAVLRAPVDAFFDDVMVNAEELDLRLNRQGLLQSL 692 Query: 689 KNIILIVINVQKIV 702 + V ++ ++ Sbjct: 693 HVAMNRVADLSRLA 706 >gi|329894834|ref|ZP_08270634.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC3088] gi|328922728|gb|EGG30062.1| Glycyl-tRNA synthetase beta chain [gamma proteobacterium IMCC3088] Length = 694 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 210/724 (29%), Positives = 341/724 (47%), Gaps = 61/724 (8%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D FL+EI +EE+P + A+ ++ + + + + TP RL + + L Sbjct: 8 MSDAFLIEIGTEELPPKSLRALAQSFHDEVVAGFSHLNLAPVDSKWFATPRRLAVRINQL 67 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 SP+ E LGP G A GF + G+ + I D KG Sbjct: 68 PSRSPDTQEIVLGPPAAAAKNDAGEWTPAAIGFAKKQGVSADALELI--DSDKGPRLGFT 125 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P E V +V A+ K+P K MRW + S ++RP+ ++C+ D Sbjct: 126 KTVPGAQTELVAAHVVNEALAKLPIAKRMRWGS-----SRTEFVRPVHWVVCLYGDNDDL 180 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + +++GHRF AP PIK++S Y DL A V+ + E R+ IL Sbjct: 181 G-----TIFGLTASRVSHGHRFMAPEPIKIRSAATYEEDLLAAKVIANYEKRKAMILKQV 235 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+ + D DLL+E+ LVEW G FD+ +L +P E + ++K +QK F Sbjct: 236 KNLAATYSADAQIDDDLLDEVTALVEWPVALSGEFDRDFLRVPSEALIASMKEHQKYFHL 295 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + EG L FI V+NI++ + IV GN RV+ RL DA F+ D Sbjct: 296 QDAEGELLPRFITVANIESPEP-ERIVHGNERVIRPRLADAAFFYDTD------------ 342 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L L R R+ + + F K+G+ ++V R+ L IA I AD ++ Sbjct: 343 --------LKTRLADR--RIVLEKMTFQHKLGSVYDKVVRVASLASFIATKIGADASIAA 392 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R L+K+DL +E+V EFPELQG G YA + D IE+H PR +++P N Sbjct: 393 RGAELAKSDLASELVNEFPELQGIAGAYYARAEGLGDEIADVIEQHYLPRFATDDLPDNL 452 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 + V++AD+ DTL +AI E PSGSKDP+ALRRA+L ++R+I++N +++ L++ + Sbjct: 453 EATAVAIADRCDTLAGIFAIGEIPSGSKDPFALRRASLAVLRLIIDNNLNLDLAELFSEA 512 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++LI + ++R + I + A++ + L + L Sbjct: 513 LRRLPFDVPPNSLESLIAYLNERYYARYEAQGIPITTVRAVINQGVNEPLDFQRRLNALV 572 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + KR+ ILA + S E L+ AE L + + Sbjct: 573 VFSDMPEALALASAYKRVGNILAKADASKPIYSDE----LLVETAEHALAKALQALKPAL 628 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 ++++ K Y L S+ EP+++FF++V+VN +D ++R NRL LL + + V ++ Sbjct: 629 DKAINAKDYSGYLTHLASLREPVDVFFNEVMVNAEDDKLRQNRLGLLATLAALFGAVADL 688 Query: 699 QKIV 702 +++ Sbjct: 689 KELA 692 >gi|227514582|ref|ZP_03944631.1| glycine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227086993|gb|EEI22305.1| glycine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 692 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 194/730 (26%), Positives = 341/730 (46%), Gaps = 75/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL+ Sbjct: 5 YLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G I+ KG Y+ V + Sbjct: 65 PDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGATVDD---IEFKEVKGVEYVYVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++VL + I + +P MRW + ++IRP+ ++ +L +++ Sbjct: 122 QGKPVDEVLAG-LNDVITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL-----DDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + D+ + G +T GHRF ++++S Y+ L++ V++D R+ I + + Sbjct: 171 VPFDILNVTAGRLTRGHRFLGHD-VEIKSATDYVAALKDDFVIVDAAERKATIKDQIQAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F R Sbjct: 230 VDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFCVRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N A +++GN RV+ RLEDA F+ DQ Sbjct: 290 DGKLQPAFISVRNGNAV-HLDNVIKGNERVLVPRLEDAKFFFDEDQKM------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 +DQ + RL +V FH +I + ++++R + L + Q + ++A + Sbjct: 337 --------TIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQELADLA 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P +P Sbjct: 387 RAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGALPQTT 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 447 VGAVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDFQASA 506 Query: 533 NL--------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 FF DRLK +RHD+++A+ + IV+ Sbjct: 507 KQAVEQATPALGLDYAKNADAVTDFFIDRLKQLFSLEHLRHDIVDAVTDTHVTDPAAIVE 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L+ A + + + R+ ++ A ++ ++ P +E +L + Sbjct: 567 AAHVLDAHKDDADLKDQVEALTRVIRLAAKGNLSEDDV--KVDPSLFENPSEGQLDQAVQ 624 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + + Q L + I ++F++ ++ D V++NRLSLL + + Sbjct: 625 AL----IDAKEGRSLDQQFSALLELEPVISLYFEENMIMDKDEAVKNNRLSLLTILADQT 680 Query: 693 LIVINVQKIV 702 N+ +++ Sbjct: 681 AAFGNLDQLI 690 >gi|260662167|ref|ZP_05863063.1| glycyl-tRNA synthetase beta subunit [Lactobacillus fermentum 28-3-CHN] gi|260553550|gb|EEX26442.1| glycyl-tRNA synthetase beta subunit [Lactobacillus fermentum 28-3-CHN] Length = 692 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 194/730 (26%), Positives = 341/730 (46%), Gaps = 75/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL+ Sbjct: 5 YLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G I+ KG Y+ V + Sbjct: 65 PDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGATVDD---IEFKEVKGVEYVYVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++VL + I + +P MRW + ++IRP+ ++ +L +++ Sbjct: 122 QGKPVDEVLAG-LNDVITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL-----DDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + D+ + G +T GHRF ++++S Y+ L++ V++D R+ I + + Sbjct: 171 VPFDILNVTAGRLTRGHRFLGHD-VEIKSATDYVAALKDDFVIVDAAERKATIKDQIQAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F R Sbjct: 230 VDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFCVRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N A +++GN RV+ RLEDA F+ DQ Sbjct: 290 DGKLQPAFISVRNGNAV-HLDNVIKGNERVLVPRLEDAKFFFDEDQKM------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 +DQ + RL +V FH +I + ++++R + L + Q + ++A + Sbjct: 337 --------TIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQELADLA 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P +P Sbjct: 387 RAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGALPQTT 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 447 VGAVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDFQASA 506 Query: 533 NL--------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 FF DRLK +RHD+++A+ + IV+ Sbjct: 507 KQAVEQATPALGLDYAKNADSVTDFFIDRLKQLFSLDHLRHDIVDAVTDTHVTDPAAIVE 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L+ A + + + R+ ++ A ++ ++ P +E +L + Sbjct: 567 AAHVLDAHKDDADLKDQVEALTRVIRLAAKGNLSEDDV--KVDPSLFENPSEGQLDQAVQ 624 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + + Q L + I ++F++ ++ D V++NRLSLL + + Sbjct: 625 AL----IDAKEGRSLDQQFSALLELEPVISLYFEENMIMDKDEAVKNNRLSLLTILADQT 680 Query: 693 LIVINVQKIV 702 N+ +++ Sbjct: 681 AAFGNLDQLI 690 >gi|184155319|ref|YP_001843659.1| glycyl-tRNA synthetase subunit beta [Lactobacillus fermentum IFO 3956] gi|238692973|sp|B2GBZ7|SYGB_LACF3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|183226663|dbj|BAG27179.1| glycyl-tRNA synthase beta subunit [Lactobacillus fermentum IFO 3956] Length = 692 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 194/730 (26%), Positives = 340/730 (46%), Gaps = 75/730 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL+ Sbjct: 5 YLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G I+ KG Y+ V + Sbjct: 65 PDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGATVDD---IEFKEVKGVEYVYVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + +VL + I + +P MRW + ++IRP+ ++ +L +++ Sbjct: 122 QGKPVAEVLAG-LNDVITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL-----DDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + D+ + G +T GHRF ++++S Y+ L++ V++D R+ I + + Sbjct: 171 VPFDILNVTAGRLTRGHRFLGHD-VEIKSATDYVAALKDDFVIVDAAERKATIKDQIQAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F R Sbjct: 230 VDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFCVRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N A +++GN RV+ RLEDA F+ DQ Sbjct: 290 DGKLQPAFISVRNGNAV-HLDNVIKGNERVLVPRLEDAKFFFDEDQKM------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 +DQ + RL +V FH +I + ++++R + L + Q + ++A + Sbjct: 337 --------TIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQELADLA 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P +P Sbjct: 387 RAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGALPQTT 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 447 VGTVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDFQASA 506 Query: 533 NL--------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 FF DRLK +RHD+++A+ + IV+ Sbjct: 507 KQAVEQATPALGLDYAKNADAVTDFFIDRLKQLFSLDHLRHDIVDAVTDTHVTDPAAIVE 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L+ A + + + R+ ++ A ++ ++ P +E +L + Sbjct: 567 AAHVLDAHKDDADLKDQVEALTRVIRLAAKGNLSEDDV--KVDPSLFENPSEGQLDQAVQ 624 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + + Q L + I ++F++ ++ D V++NRLSLL + + Sbjct: 625 AL----IDAKEGRSLDQQFSALLELEPVISLYFEENMIMDKDEAVKNNRLSLLTILADQT 680 Query: 693 LIVINVQKIV 702 N+ +++ Sbjct: 681 AAFGNLDQLI 690 >gi|94309391|ref|YP_582601.1| glycyl-tRNA synthetase subunit beta [Cupriavidus metallidurans CH34] gi|93353243|gb|ABF07332.1| glycine tRNA synthetase, beta subunit [Cupriavidus metallidurans CH34] Length = 707 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 204/738 (27%), Positives = 344/738 (46%), Gaps = 72/738 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLK 57 M D L+E+++EE+P + + E + L L ++ + TP RL + Sbjct: 5 MTDSLLIELFTEELPPKALARLGEAFAQGLFDGLGARDLLEAGATVTPFATPRRLGALVS 64 Query: 58 GLSPHSPEKIE-ERLGP------RVGAGK----KAIDGFLRSTGLQTISDCQIKK-DPKK 105 G+ +P++ + E++ P GA K + +S G+ I +++ K Sbjct: 65 GVRRTAPDREQREKVLPLTVALDANGAPTAPLGKKLAALAKSVGVAEIDWQTLERASDGK 124 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCI 165 D + + D L+ + + K+P PK M + + ++RP S++ + Sbjct: 125 ADAFFYRYTARGATLADGLQAALDETLTKLPIPKVMSYQRPDG--TTVHFVRPAHSLIAL 182 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECR 224 AE I+ + + N+T GHRF + I++ Y LE V+ R Sbjct: 183 YGAE-----IVPVSALGLQASNLTQGHRFLSQGTIEIPHAAEYAGLLESRGRVVASYADR 237 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R I + A A +++ LL+E+ LVEW ++ F++ +L +P+E + LT++ Sbjct: 238 RERIRTALLKEAGAD--KVIMPDSLLDEVNSLVEWPVIYPCHFEEAFLAVPQECLILTMQ 295 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 TNQK F EG L N F++VSN+ A+D +I+ GN RVV RL DA F+ +D+ Sbjct: 296 TNQKYFALTDAEGHLRNRFLIVSNL-ATDTPQSIITGNERVVRPRLADAKFFFDQDRK-- 352 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K L R+ +L +VV+H KIG Q +RV R++ + +A + Sbjct: 353 ------------------KTLASRVPQL--ANVVYHNKIGNQLDRVQRLQQIAGHLADAM 392 Query: 405 DA-----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 +A D A R L+KADL T++V EFPELQG +G YA +E A EH Sbjct: 393 NATGAPVDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDEAEDVALACSEHY 452 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PR + +P +S V+LADKL+TLI W I +P+G KDP+ALRR LGI+R+++E Sbjct: 453 RPRFAGDALPAGNVSTAVALADKLETLIGIWGIGLQPTGEKDPFALRRHALGILRMLIEK 512 Query: 520 KIDIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + +PL+ + + F DR++ YL D+ + +EA++ Sbjct: 513 PLALPLNDVLGLTEQAFAGIAAVKPSREAITDFLFDRVRGYLKDKGYTTNEVEAVVSLRP 572 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L I+ ++ + F + + E + KRI IL KK E + AE Sbjct: 573 QQLHDILARMEAVRTFAALPEAEALAAANKRITNIL----KKTDEAIGSVDVSLFQEAAE 628 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ I ++ + + L + + ++ FF+ V+V +D ++R NRL+L Sbjct: 629 GALHEAIERVRPGVEAAFAGGDFTAALRDLAQLRDAVDRFFNDVMVMAEDAKLRANRLAL 688 Query: 685 LQYIKNIILIVINVQKIV 702 L + + V ++ K+ Sbjct: 689 LATLHGLANRVADISKLA 706 >gi|294101759|ref|YP_003553617.1| glycyl-tRNA synthetase, beta subunit [Aminobacterium colombiense DSM 12261] gi|293616739|gb|ADE56893.1| glycyl-tRNA synthetase, beta subunit [Aminobacterium colombiense DSM 12261] Length = 687 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 196/720 (27%), Positives = 344/720 (47%), Gaps = 62/720 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LLEI +EEIP+R A E + + + + + Y TP R+ L ++ + Sbjct: 4 KNLLLEIGTEEIPSRFLPDALETIVSYAEKEFETARIKHGRIGAYGTPRRIALTIRDVQE 63 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-LAVL 113 + +KI GP G KA GF +S G+ ++ G Y AV+ Sbjct: 64 NQEDKIMTYKGPTWESAFDANGNPTKAAIGFAKSKGVNY---EELTHKEVDGVRYAFAVI 120 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++++L I+ + ++ +PK+M W + RP++ I+ +L + Sbjct: 121 SEQGNPVQNLLPQILTNIMGQIVFPKNMYW-----LDPTIKFARPIRWIVALL-----DK 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ I G T GHRF I V ++ L + V+LD E R+ +++ Sbjct: 171 EIVPFTYGGIESGRTTRGHRFMGSRSIDVADASEFMEKLYDNYVILDQEKRKQKMISGIT 230 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L +G ++ D +L++E + LVE+ F GSFDKK+L +PEE++ +++K +QK F R Sbjct: 231 ALEKEIGGKVELDPELVDENLYLVEFPIPFYGSFDKKFLDIPEEVLTISMKKHQKYFPVR 290 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L F+ VSN +A++ G + +GN RV+ ARLEDA FW D Sbjct: 291 SENGKLMPFFVGVSNNRATNMG-VVREGNERVLRARLEDAAFFWAED------------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALV 411 L KPL + L +V+ K+G+ +++ + L K + + + + LV Sbjct: 337 -------LKKPLAGCIEGLK--SIVYQEKLGSLYDKIKATQKLAKYLCEKLGFLDEAKLV 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA +LSK DL T +V EFPELQG +G+EYA+ E AI E P+ + VP++ Sbjct: 388 DRAALLSKCDLLTNMVYEFPELQGIMGREYALRNGEPERVAKAIYEQYLPKSAGDTVPSD 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 I + +A+++ ++N + +P+GS+DPYALRRA I II +D+ ++ I Sbjct: 448 IIGAILGIAERIFVIVNCHKVGLQPTGSQDPYALRRAARCINEIIWGVDLDVDIADLISQ 507 Query: 532 ------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + FF RL + L ++ HDL+ + + + +N+ Sbjct: 508 AGQNFEVPEKILEQSRSFFEQRLHVQLKEKGYEHDLVTLAISVVGRKPFQALHFLNVVNK 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + +A R+ IL+ E E S +I+ + E L+ +++ ++ Sbjct: 568 VKNEEWFVDLVTAAVRVRNILSKAE----EYSKDIAQELFQKNVENELFIEMNEMTPLVE 623 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ + ++ LL + I FFD V++ +D ++R NRL+LL +I V ++ Sbjct: 624 DALERYDWDELMVLLSRLSPRITAFFDDVMIMDNDLDIRQNRLALLSRCNSIFKEVGDLG 683 >gi|218441712|ref|YP_002380041.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7424] gi|226737047|sp|B7KD52|SYGB_CYAP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218174440|gb|ACK73173.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7424] Length = 717 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 199/723 (27%), Positives = 337/723 (46%), Gaps = 75/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA +A + L+E+ + + + Y TP RL + +KGL Sbjct: 1 MPSFLLEVGTEELPANFVDEAIAQWQSRIPSSLEEQQLTPEGIEFYGTPRRLAVLIKGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++IEE GP G KA++GF+R G+ +D KG+ Sbjct: 61 AKQSDRIEEVKGPAANVAFKSGKPTKALEGFVRKQGVTPDEVE--IRDTDKGEFVFVQKN 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L+ +VP I ++ + MRW + RP++ ++ + + + Sbjct: 119 ITGRNTTEILQELVPQWITQLEGRRFMRWGDGD-----LRFPRPIRWLVTLWDQDILPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ +TYGHR AP + + Y + L++A V + P RR I + Sbjct: 174 LVNG-ATQVKSDRLTYGHRILAPESVSIPEASAYQKSLQQAYVEVSPLQRRQTIEQQIEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR- 293 +A + V DLL+E++ LVE+ G+F+ +L LP E+I + T+Q+ F + Sbjct: 233 VAKQLKGVAVIPPDLLDEVVNLVEYPSAVAGNFEPDFLNLPTEVITTVMVTHQRYFPVKA 292 Query: 294 ----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 + L FI +SN + G I GN RV+ ARL DA F+K D + Sbjct: 293 TGKTNKNNTLLPYFITISNGDP-NKGEIIAAGNERVIRARLADAQFFYKADCD------- 344 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 +PL+ + +L+ V F ++GT ++V RI + + IA +D D Sbjct: 345 -------------EPLESYLPQLET--VTFQEQLGTIRDKVDRIMEISQLIADQLDLDSG 389 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + ++ +L KADL T++V EFPELQG +G++YA+ E+ + I EH PRG + Sbjct: 390 ERSEIESTAMLCKADLVTQMVYEFPELQGVMGQKYALASGESPNVALGIFEHYLPRGADD 449 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + V LAD++DT+++ + + P+GS DP+ALRRA GII++ ++ I + Sbjct: 450 IMPESLTGQVVGLADRIDTIVSIFGLGMIPTGSGDPFALRRAATGIIKVTWYAELPIDIL 509 Query: 527 QFIED----------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN----- 564 +E ++L FF RL L D I +DL+ A+L + Sbjct: 510 DLLEQSSQDFVTAHPDKTSPIESLKSFFIQRLSTLLQDDLHIDYDLVNAVLGENDPEYTE 569 Query: 565 ---DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYL 619 +LL + D + L ++ K ++ + R ++ E +E+ E I P Sbjct: 570 RALRDLLDVRDRAQFLQSIRNNQKIDEIYETVNRSARLAVKGELDTQELDPEKVIRPALF 629 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDRE 676 +E+ Y V+ D + + Y + D L I + FF D VLV ++ E Sbjct: 630 EKSSEEHFYKVLIDLVPTTLTAQRERNYQLLVDALGKIAPTVSNFFDGEDSVLVMDENLE 689 Query: 677 VRD 679 VR+ Sbjct: 690 VRE 692 >gi|282882490|ref|ZP_06291111.1| glycyl-tRNA synthetase, beta subunit [Peptoniphilus lacrimalis 315-B] gi|281297632|gb|EFA90107.1| glycyl-tRNA synthetase, beta subunit [Peptoniphilus lacrimalis 315-B] Length = 692 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 215/731 (29%), Positives = 364/731 (49%), Gaps = 70/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE+P+R + A E + + L E + Y ++ Y TP RL LY+ G+ Sbjct: 1 MNRYLLEIGVEELPSRFVNLAMEQIREKIEKSLNENDLKYDSLEVYATPRRLSLYINGIF 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +E GP V G K ++GF++S + Q + K A++ Sbjct: 61 DRQDDINKEVKGPSVKISFDEDGNPTKPLEGFMKSQNISLKDLEQREVKGNK--YVFAII 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K ++VLK I+P I + P++M+W + + RP++ I+ IL + Sbjct: 119 KKRGLDAKEVLKNIIPDMIYHINLPRNMKWGGKN-----IKFPRPIRWIVSIL-----ND 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + IP NIT GHRF I + ++D+Y + LEE V+LD R I ++ Sbjct: 169 EVVEFPFEGIPVSNITRGHRFLGSDNIVIDNVDNYAKLLEENFVILDQNKREEIIRFESK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A ++G E+ E+KDLLEE++ +VE+ G+ K++L LP+E+I T+ + + Sbjct: 229 KIARSLGGEIKENKDLLEELVYIVEYPTPIKGTIKKEFLILPKEVITTTMIDHLRYTPIY 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI + N D +++GN +V+ ARL DA F++ D Sbjct: 289 DDKGELLPYFITIRNGN-HDYEDIVIKGNEKVLGARLSDAKFFYEEDI------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 SKPL+ + L V F K+G E+ R + +I + + D + Sbjct: 336 --------SKPLEDYVDALS--GVNFLDKLGNMREKEERNEAIALEIGKNLEVADETLES 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + R LSKADL T +V EF ELQG +G YA L E AI E PR +++P Sbjct: 386 LKRTAYLSKADLTTHMVVEFTELQGIMGSIYAKLSGEKDIVNSAIYEQYLPRFKGDDLPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + S+ADK+DT+ +AI++ P+GS DP+ LRR+ +G+I II N ++ L + Sbjct: 446 TTVGSIYSIADKIDTISGLFAIDKVPTGSLDPFGLRRSAIGLINIIRNNNWELNLDSILS 505 Query: 531 DQ-------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 NL FF R+K+ L D D R+D+I+AIL E D + I Sbjct: 506 QALYEYVNKMGLTLNYEAVMKNLKEFFKQRIKVMLEDLDYRYDVIDAILESE-DKIHIIF 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++++F KF+ S +RI+ + + + E+ + +AEK+L++ I Sbjct: 565 KKAPQVDKWFKENDRSKFVDSFERIYNLTSKVSEFK-----EVDAELFKEDAEKKLFSQI 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + +++ +L S+ I+ FFD+V+V D +RDNRL+L+ ++N+ Sbjct: 620 ENIKAELEAYNNANKFYDYLNLCDSLTPYIDEFFDKVMVMDKDTSIRDNRLALINRVENV 679 Query: 692 ILIVINVQKIV 702 + + ++KIV Sbjct: 680 VSRIFAIEKIV 690 >gi|22299735|ref|NP_682982.1| glycyl-tRNA synthetase subunit beta [Thermosynechococcus elongatus BP-1] gi|22295919|dbj|BAC09744.1| glycyl-tRNA synthetase beta chain [Thermosynechococcus elongatus BP-1] Length = 727 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 212/745 (28%), Positives = 343/745 (46%), Gaps = 77/745 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLE+ +E++PAR A ++ LKE G+ + + TP RL + ++GL P Sbjct: 7 HTFLLEVGTEDLPARFVSSALRQWRTLIPQTLKERGLT-GEVNVWATPRRLAVLIEGLPP 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRS-TGLQTISDCQIKKDPKKGDVYLAVLR 114 P+++ E GP G A+ GFLRS G ++ D +I+ K VYL +R Sbjct: 66 QQPDQVVEIKGPAATVAFREGEPTPALLGFLRSRQG--SLEDIEIRPTAKGEVVYLKQVR 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L + I + P+ MRW + RP++ ++ + Sbjct: 124 -PGQPTPQLLSELAQQWIAALEGPRFMRWGDGD-----LRFSRPIRWLVLLWDERVLPL- 176 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ I TYGHR + I + Y LE+A VL+DPE R+ I Sbjct: 177 VLESHSVAIASDRTTYGHRVLSQGAIVLSHAQDYATALEKAGVLVDPEVRQQRIREQIAA 236 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA+ G + LLEE+ LVEW +GSF+ ++L LP E+I + ++Q+ F T Sbjct: 237 LAAEAGGWTDLEVPLLEEVTHLVEWPTAVLGSFEARFLALPLEVITTVLVSHQRYFPVYT 296 Query: 295 REGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI +SN + I GN RV+ ARL DA F+K D Sbjct: 297 DATRQALLPVFITISNGAPA-ATPLIRGGNERVIRARLADAEFFYKADT----------- 344 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 ++PL+ +L V F ++G+ ++V R+ L ++IA ++ A+VA Sbjct: 345 ---------AQPLEHYCGKL--ATVTFQDELGSMADKVERLTALARQIATALNCTAAEVA 393 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++R L KADL T++V EFPELQG +G+ YA + E + I EH PR + P Sbjct: 394 AIERTASLCKADLVTQMVGEFPELQGYMGQVYATVSGEAPAVATGIFEHYLPRFAGDRQP 453 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V LAD+LDTL++ + + P+GS DP+ALRRA G+I I+ + + + L + Sbjct: 454 QSLTGQVVGLADRLDTLVSLFGLGLCPTGSSDPFALRRAANGVITILWQGEHHLNLLALL 513 Query: 530 E-------------------DQNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN----- 564 + +Q L FF RL+ L + I +DL+ A++ + Sbjct: 514 QEYAQAFCRQFAAKLSAADLEQQLRQFFSQRLRTLLQEDLGIEYDLVNAVIPEDQPELQI 573 Query: 565 ---DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL-EISPQYLL 620 +++ D + L + S + + R ++ +++ + ++L Sbjct: 574 RALRDVVDARDRAQFLQKLRQSGELMAIYPTVNRAARLARQGTLGTDCLNIRAVKAKHLE 633 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 EK YA + D +Q++ + Y I D L S+ + FFD VLV +D V Sbjct: 634 TPIEKEFYAALKDILPTVQQAQGQRAYGAIVDALVSLAPIVSRFFDGEESVLVMAEDATV 693 Query: 678 RDNRLSLLQYIKNIILIVINVQKIV 702 R NRL+LL ++N I+ + IV Sbjct: 694 RANRLALLGLLRNCAAIIGDFGAIV 718 >gi|300813849|ref|ZP_07094154.1| glycine--tRNA ligase, beta subunit [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512036|gb|EFK39231.1| glycine--tRNA ligase, beta subunit [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 692 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 215/731 (29%), Positives = 363/731 (49%), Gaps = 70/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE+P+R + A E + + L E + Y ++ Y TP RL LY+ G+ Sbjct: 1 MNRYLLEIGVEELPSRFVNLAMEQIREKIEKSLNENDLKYDSLEVYATPRRLSLYINGIF 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +E GP V G K ++GF++S + Q + K A++ Sbjct: 61 DRQDDINKEVKGPSVKISFDEDGNPTKPLEGFMKSQNISLKDLEQREVKGNK--YVFAII 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +K ++VLK I+P I + P++M+W + + RP++ I+ IL + Sbjct: 119 KKRGLDAKEVLKNIIPDMIYHINLPRNMKWGGKN-----IKFPRPIRWIVSIL-----ND 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ + IP NIT GHRF I + ++D+Y + LEE V+LD R I ++ Sbjct: 169 EVVEFPFEGIPVSNITRGHRFLGSDNIVIDNVDNYAKLLEENFVILDQNRREEIIRFESK 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A ++G E+ E+KDLLEE++ +VE+ G+ K++L LP+E+I T+ + + Sbjct: 229 KIARSLGGEIKENKDLLEELVYIVEYPTPIKGTIKKEFLILPKEVITTTMIDHLRYTPIY 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI + N D +++GN +V+ ARL DA F++ D Sbjct: 289 DDKGELLPYFITIRNGN-HDYEDVVIKGNEKVLGARLSDAKFFYEEDI------------ 335 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 SKPL+ + L V F K+G E+ R + +I + + D + Sbjct: 336 --------SKPLEDYVDALS--GVNFLDKLGNMREKEERNEAIALEIGKNLEVADETLES 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + R LSKADL T +V EF ELQG +G YA L E AI E PR +++P Sbjct: 386 LKRTAYLSKADLTTHMVVEFTELQGIMGSIYAKLSGEKDIVNSAIYEQYLPRFKGDDLPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + S+ADK+DT+ +AI++ P+GS DP+ LRR+ +G+I II N ++ L + Sbjct: 446 TTVGSIYSIADKIDTISGLFAIDKVPTGSLDPFGLRRSAIGLINIIRNNNWELNLDSILS 505 Query: 531 DQ-------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 NL FF R+K+ L D D R+D+I+AIL E D + I Sbjct: 506 QALYEYVNKMGLTLNYEAVMKNLKEFFKQRIKVMLEDLDYRYDVIDAILESE-DKIHIIF 564 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ +F KF+ S +RI+ + + + E+ + +AEK+L++ I Sbjct: 565 KKAPQVDRWFKENDRSKFVDSFERIYNLTSKVSEFK-----EVDAELFKEDAEKKLFSQI 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + +++ +L S+ I+ FFD+V+V D +RDNRL+L+ ++N+ Sbjct: 620 ENIKAELEAYNNANKFYDYLNLCDSLTPYIDEFFDKVMVMDKDTSIRDNRLALINRVENV 679 Query: 692 ILIVINVQKIV 702 + + ++KIV Sbjct: 680 VSRIFAIEKIV 690 >gi|288555749|ref|YP_003427684.1| glycyl-tRNA synthetase subunit beta [Bacillus pseudofirmus OF4] gi|288546909|gb|ADC50792.1| glycyl-tRNA synthetase subunit beta [Bacillus pseudofirmus OF4] Length = 693 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 205/733 (27%), Positives = 346/733 (47%), Gaps = 73/733 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL E+ EE+PAR + L + LKEE + + + + TP RL +Y+ G Sbjct: 1 MSKRDFLFELGLEELPARFVTDSMNQLKNKVSDWLKEERLDFDAIEAFSTPRRLAIYITG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L P+ E GP G KA GF R G+ +D K+ K + A Sbjct: 61 LKEKQPDVEAEAKGPAKKIAQDEEGNWSKAALGFARGQGVT--ADDLFFKELKGVEYVYA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + ++L + + + +PK+MRW+ + RP++ ++ + Sbjct: 119 KTFTAGKKTVELLPA-LKSIVTSMHFPKNMRWNQYD-----LRFARPIQWMVALY----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ ++ N T GHRF +K+ + Y L V+ PE R+ AI N Sbjct: 168 GEEIIPFEITDVKTSNATRGHRFLGEE-VKLDTPADYETALLGQYVIARPEERKRAIRNQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + G + D+DLLEE+ LVE+ G++D +L +P+E++ +++ +Q+ F Sbjct: 227 IESMTEGNGWVIPIDEDLLEEVTNLVEYPTALSGTYDDAFLEIPKEVLITSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L F+ V N + +GN +V+ ARL DA F+ DQ Sbjct: 287 VEDTEGKLLPHFVTVRNGD-HQHLENVAKGNEKVLRARLSDAAFFYAEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---V 408 ++ + RL+ ++V+H +G+ ++V R+R I++L+ D Sbjct: 338 ------------KIEDALGRLE--NIVYHEDLGSIADKVRRVRKGVTSISKLVALDSNEQ 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + DR ++K DL T++V EFPELQG++G+ YA L E + I+EH P+ + Sbjct: 384 EVADRIAEIAKFDLVTQMVYEFPELQGRMGEVYAGLIGEPVEVTVGIKEHYMPKFAGDKS 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P+ K S VSLADKLDT++ +AI P+GS+DPYALRR GI+++I + D+ + + Sbjct: 444 PSTKASTVVSLADKLDTIVTCFAIGLIPTGSQDPYALRRQAAGIVQMIADYDFDVEIDEL 503 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ FF R+K L ++ IR+D+I+A+L E ++ T Sbjct: 504 VAASLDVSEERGLLKRDREDITKEVMEFFSLRIKNALQEKGIRYDVIDAVLTSEAIHVST 563 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L + S +K + + R+ I E ++EI P+ E EK LY Sbjct: 564 TIKKAELLMDQVSQPAFKKTVEALSRVTNIAKKA-----ETAVEIKPELFEKEEEKELYR 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +Q ++ + + L SI I +FD ++V +D +V+ NRL+ + + Sbjct: 619 HYESAQKEVQIALANGDASRAFKSLQSIEPSIHAYFDHIMVMAEDEKVKRNRLAQMLELS 678 Query: 690 NIILIVINVQKIV 702 +I N Q IV Sbjct: 679 AVIRAFANFQSIV 691 >gi|227890915|ref|ZP_04008720.1| glycyl-tRNA synthetase beta chain [Lactobacillus salivarius ATCC 11741] gi|227867324|gb|EEJ74745.1| glycyl-tRNA synthetase beta chain [Lactobacillus salivarius ATCC 11741] Length = 693 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 209/735 (28%), Positives = 342/735 (46%), Gaps = 77/735 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF+R G+ I KG Y+ V Sbjct: 61 ADKQADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGVTVDD---IFFKELKGTEYVYV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + P + + +VL + VA+ + +P MRW + F ++RP+K ++ +L Sbjct: 118 KKFIPGKPVSEVLTGMKDVAMD-LKFPTMMRWGSND-----FEYVRPIKWLVALL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ ++ +I G T GHRF + V S D Y+ LE V+ D R+ I Sbjct: 167 DDEVVPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F Sbjct: 226 IDALATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFY 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G L F+ V N D +V GN +V+ ARLEDA F++ DQ + Sbjct: 286 VTDKDGNLLPNFVSVRNGN-KDYLENVVAGNEKVLTARLEDAKFFYEEDQQH-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 + + RL V+FH KIGT E++ R+ +L K + + ++ Sbjct: 337 ------------TIADYVERLK--KVMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 +DRA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P + Sbjct: 383 KDLDRASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 443 PQSNVGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLL 502 Query: 529 IEDQNLIL---------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E N F DRL L R D+++A++ + Sbjct: 503 HEAINYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPF 562 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + L++ ++ + + R+ ++ + + I + EK L Sbjct: 563 IQALQAAQVLSKHAEDDNFKEVIEALTRVTRLAKKAPEFGSDA--VIDSTLFENDTEKVL 620 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + ++ ++++ +L S+ + I +FD ++ DD +V++NRL L Sbjct: 621 ADEFAKVKAGYGDAEMNEKFA----ILSSLKDSITAYFDATMIMADDEKVKNNRLLQLVK 676 Query: 688 IKNIILIVINVQKIV 702 I + ++ K++ Sbjct: 677 IAELTEDFGSLDKLI 691 >gi|325695192|gb|EGD37093.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK150] Length = 679 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDSDGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEVGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIVSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENSAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKV-- 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 617 ELTPDLAAN-----LDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|90961888|ref|YP_535804.1| glycyl-tRNA synthetase beta chain [Lactobacillus salivarius UCC118] gi|122448989|sp|Q1WTP1|SYGB_LACS1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|90821082|gb|ABD99721.1| Glycyl-tRNA synthetase beta chain [Lactobacillus salivarius UCC118] Length = 693 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 209/735 (28%), Positives = 342/735 (46%), Gaps = 77/735 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF+R G+ I KG Y+ V Sbjct: 61 ADKQADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGVTVDD---IFFKELKGTEYVYV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + P + + +VL + VA+ + +P MRW + F ++RP+K ++ +L Sbjct: 118 KKFIPGKPVSEVLTGMKDVAMD-LKFPTMMRWGSND-----FEYVRPIKWLVALL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ ++ +I G T GHRF + V S D Y+ LE V+ D R+ I Sbjct: 167 DDEVVPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F Sbjct: 226 IDDLATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFY 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G L F+ V N D +V GN +V+ ARLEDA F++ DQ + Sbjct: 286 VTDKDGNLLPNFVSVRNGN-KDYLENVVAGNEKVLTARLEDAKFFYEEDQQH-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 + + RL V+FH KIGT E++ R+ +L K + + ++ Sbjct: 337 ------------TIADYVERLK--KVMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 +DRA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P + Sbjct: 383 KDLDRASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 443 PQSNVGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLL 502 Query: 529 IEDQNLIL---------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E N F DRL L R D+++A++ + Sbjct: 503 HEAINYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPF 562 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + L++ ++ + + R+ ++ + + I + EK L Sbjct: 563 IQALQAAQVLSKHAEDDNFKEVIEALTRVTRLAKKAPEFGSDA--VIDSTLFENDTEKVL 620 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + ++ ++++ +L S+ + I +FD ++ DD +V++NRL L Sbjct: 621 ADEFAKVEAGYGDAEMNEKFT----ILSSLKDSITAYFDATMIMADDEKVKNNRLLQLVK 676 Query: 688 IKNIILIVINVQKIV 702 I + ++ K++ Sbjct: 677 IAELTEDFGSLDKLI 691 >gi|312880033|ref|ZP_07739833.1| glycyl-tRNA synthetase beta chain [Aminomonas paucivorans DSM 12260] gi|310783324|gb|EFQ23722.1| glycyl-tRNA synthetase beta chain [Aminomonas paucivorans DSM 12260] Length = 694 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 204/720 (28%), Positives = 343/720 (47%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA E++ + L+ + + + Y TP RL LY++ L+ Sbjct: 9 DLLFEIGTEEIPAGFLSWGLEEIRRLGEEELQAARIPHGGILSYGTPRRLTLYVRSLASR 68 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + +E GP G KA GF RS + + D Q+++ AVL++ Sbjct: 69 QEDLVETVKGPLWAQAFDPNGHPTKAAAGFARSRQI-PVEDLQMREVDGVPYA-FAVLKQ 126 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + E ++ ++ ++++ +PK+M W + RP++ ++ + ++I Sbjct: 127 EGQETESLIPEVLQRILKRLVFPKNMYWQDP-----TVRFARPIRWLVALW-----GDQI 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + L E+ T GHRF ++++ Y+ L + VL DP+ RR +L+ L Sbjct: 177 VPVTLGEVHSDRFTRGHRFLGKRNLEIREAKDYLEALFDEFVLADPQKRREKMLSGIASL 236 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +G D DL+EE + LVE+ F GSFD +L +P E++ T+K +Q+ F R R Sbjct: 237 EKDMGAGADLDPDLVEENLNLVEYPVPFFGSFDPSFLDIPSEVLVTTMKKHQRYFPVRDR 296 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L F+ VSN QA+ + +GN RV+ ARL DA FW DQ Sbjct: 297 SGKLCPFFVGVSNNQAT-RMQVVREGNERVLRARLSDAAFFWAEDQKAG----------- 344 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVDR 413 L R+ L V++ ++G+ ++ R R L + + + +LVDR Sbjct: 345 ---------LSSRVEGLKT--VLYQERLGSVHQKSERARTLAIWLVESLGLGEIRSLVDR 393 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL T +V EFPELQG +G+EYA + E A+ E PR + +PT+ + Sbjct: 394 AAFLAKADLLTNMVYEFPELQGVMGREYARREGEPDRVALALHEQYLPRFAGDRLPTDAV 453 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 V LAD+ DTL+ + +P+GS+DPY LRRA+ I I+ ++D+P+ Sbjct: 454 GALVGLADRADTLVAIHHVGLEPTGSQDPYGLRRASRCIDEILWGLELDVPVVDLFAKAG 513 Query: 532 ----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 Q + FF R + L ++ H ++ L+ L + L++ L E Sbjct: 514 ANLGASPETLQAVGDFFQQRQLVQLREKGYGHGMVSLALQCVGHRPLQTLRLLQVLEELK 573 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 A + +A R+ ILA + ++ P L +AE+ L A +++ G ++E+ Sbjct: 574 GEAWFASLVTAAVRVRNILAKTPEGG-----DLDPSTLTCDAERGLLAALTECGPLVREA 628 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ LL + P+ FFD VLV D +VR NRL LL+ +++ + + + Sbjct: 629 VARYEWREVAQLLLRLEGPVTRFFDDVLVMDPDEKVRTNRLGLLRRAQDLFDAIGDFSYL 688 >gi|291612940|ref|YP_003523097.1| glycyl-tRNA synthetase, subunit beta [Sideroxydans lithotrophicus ES-1] gi|291583052|gb|ADE10710.1| glycyl-tRNA synthetase, beta subunit [Sideroxydans lithotrophicus ES-1] Length = 716 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 213/736 (28%), Positives = 361/736 (49%), Gaps = 82/736 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + K + + + LKE+ ++ +N Y TP RL + + + P+++ ER Sbjct: 15 PPKALEKLSTTFANEVFASLKEQALLNENSVCTPYATPRRLAMSITEVEQQQPDRVIERK 74 Query: 72 GPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVL 124 GP V G KA++GF+RS + ++ + K + ++A + + + +++ L Sbjct: 75 GPAVAAGLDAEGKPTKALEGFMRSANVTLGQLQRVGE--GKAEYFVARIEQKGKSLDEHL 132 Query: 125 KTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIP 184 +V A++K+P PK MRW ++RP+ + + ++I+ ++ + Sbjct: 133 PEMVTQALKKLPVPKLMRWGDFE-----HQFVRPVHGLTIL-----HGKRIVPAEVLGLS 182 Query: 185 CGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 GN+T GHRF + + ++ D Y L + V+ RR +I+ LA Sbjct: 183 SGNVTSGHRFLSSERVTIEHADDYEATLARDGRVVASFTQRRESIVARLDDLAEQNKAIW 242 Query: 244 V-------------------EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 V +LL+E+ GLVEW +V++G F+ ++L +P+E + LT++ Sbjct: 243 VGHANFDLEKLLSMSNDERGVLSNLLDEVTGLVEWPEVYVGQFEAEFLDVPQECLILTMQ 302 Query: 285 TNQKCFVTRTRE-GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 NQK F G L N F++VSN+Q SD I++GN RVV RL DA F+ +D+ Sbjct: 303 QNQKYFPLLDASSGKLLNKFLIVSNMQVSDPH-HIIEGNQRVVRPRLADARFFFNQDRK- 360 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 + L+ R+ +L +VV+H K+G+Q +RV RI L IA+L Sbjct: 361 -------------------QKLESRVEKLG--NVVYHNKLGSQLQRVERITTLAGTIARL 399 Query: 404 IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 ++AD A + A L KADL T++V EFPELQG IG+ YA E++ +AIE H PR Sbjct: 400 LEADKAQAELAARLCKADLLTDMVGEFPELQGIIGRYYAFHDGEDLEVANAIEAHYHPRF 459 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN---- 519 +++P ++ +V+LADKL+T++ + I + P+G KDP+ LRR LGI+RI++E Sbjct: 460 AGDSIPMGAVACSVALADKLETVVGIYGIGQVPTGDKDPFGLRRQALGILRILIETPLDL 519 Query: 520 -----------KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + ++ F DRL+ YL DR IEA+L N L Sbjct: 520 PLPALLKATADNFPAGMLSATVAADVEGFMMDRLRGYLRDRSFDVSHIEAVLAVLNGRLH 579 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI--EEKKNREISLEISPQYLLLEAEKR 626 ++ ++ + F + + + KR+ I+ EE + + + EAE+ Sbjct: 580 EVLPRLQGVRAFAAMTVAKDLAAANKRVQNIMRKNHEELGAAMANAVFDAKLMTDEAERN 639 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+ ++D Q Y Q L ++ I+ FFDQV+V DD+++R NR LL+ Sbjct: 640 LHQAMTDIAPFAQGYFSRGEYGQNLKTLVTLKPFIDDFFDQVMVMADDQKLRINRALLLR 699 Query: 687 YIKNIILIVINVQKIV 702 + N++ V ++ K+ Sbjct: 700 QLANLMNQVADISKLA 715 >gi|301301336|ref|ZP_07207480.1| glycine--tRNA ligase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851064|gb|EFK78804.1| glycine--tRNA ligase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 693 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 209/735 (28%), Positives = 342/735 (46%), Gaps = 77/735 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF+R G+ I KG Y+ V Sbjct: 61 ADKQADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGVTVDD---IFFKELKGTEYVYV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + P + + +VL + VA+ + +P MRW + F ++RP+K ++ +L Sbjct: 118 KKFIPGKPVSEVLTGMKDVAMD-LKFPTMMRWGSND-----FEYVRPIKWLVALL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++ ++ +I G T GHRF + V S D Y+ LE V+ D R+ I Sbjct: 167 DDEVVPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F Sbjct: 226 IDDLATENNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFY 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G L F+ V N D +V GN +V+ ARLEDA F++ DQ + Sbjct: 286 VTDKDGNLLPNFVSVRNGN-KDYLENVVAGNEKVLTARLEDAKFFYEEDQQH-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 + + RL V+FH KIGT E++ R+ +L K + + ++ Sbjct: 337 ------------TIADYVERLK--KVMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 +DRA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P + Sbjct: 383 KDLDRASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 443 PQSNVGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPLL 502 Query: 529 IEDQNLIL---------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 E N F DRL L R D+++A++ + Sbjct: 503 HEAINYAYAEREDLYKNTQPITNVSETDSFVIDRLAQVLSGNKFRRDILDAVVARADMPF 562 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + L++ ++ + + R+ ++ + + I + EK L Sbjct: 563 IQALQAAQVLSKHAEDDNFKEVIEALTRVTRLAKKAPEFGSDA--VIDSTLFENDTEKVL 620 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + ++ ++++ +L S+ + I +FD ++ DD +V++NRL L Sbjct: 621 ADEFAKVEAGYGDAEMNEKFA----ILSSLKDSITAYFDATMIMADDEKVKNNRLLQLVK 676 Query: 688 IKNIILIVINVQKIV 702 I + ++ K++ Sbjct: 677 IAELTEDFGSLDKLI 691 >gi|329850859|ref|ZP_08265704.1| glycyl-tRNA synthetase beta subunit [Asticcacaulis biprosthecum C19] gi|328841174|gb|EGF90745.1| glycyl-tRNA synthetase beta subunit [Asticcacaulis biprosthecum C19] Length = 682 Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 247/723 (34%), Positives = 379/723 (52%), Gaps = 62/723 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP L+E++SEEIPARMQ AA D + L G+ +++++ Y P RL L ++GL Sbjct: 1 MPQLLIELFSEEIPARMQLGAARDFERLFGAKLNTSGLSFESIKAYVAPRRLALVVEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EE GP+ GA ++A+ GFLR GL D + ++ V++A + KP R Sbjct: 61 AEQAAVTEEVKGPKDGAPEQAMAGFLRKVGLT--QDQLVLENG----VWMARIEKPGRRT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D L ++ I PWPKSMR +S+F W+RPLK IL + +I+ +L Sbjct: 115 VDALPDMLREVILAFPWPKSMRSG-----VSSFRWVRPLKRILFLFDG-----QIVPFEL 164 Query: 181 KEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + + ++T GHRF + V Y + L + V+LD R+ IL +A + Sbjct: 165 EGLTASSLTEGHRFLGSGKALNVSDFASYHKALADNSVILDHAERQAFILKEAKAVCEDT 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGV 298 G EL+ED+ LLEE+ GL E+ +G D K+L LP E+I+ +++T+QK F R + G Sbjct: 225 GCELIEDQGLLEEVAGLNEFPMPILGDMDPKFLALPPEVIKTSMRTHQKYFAVRDKATGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 +A FI+V+NI+A DGG I +GN++V++ARL D + FW D Sbjct: 285 MAPHFIIVANIRARDGGDEIKRGNAKVLSARLSDGVFFWNEDNK---------------- 328 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + D + RL FH K+GT +RV RI L IA + AD+A A L+ Sbjct: 329 ---AGNFDGWLERLK--GTTFHVKLGTMAQRVERISALAAHIAGHLGADIAAAREAARLA 383 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +++V EFPELQG +G YA DAI EH KP+GP ++VP K+S V+ Sbjct: 384 KADLASKMVGEFPELQGVMGGYYADALKLKPEIADAIREHYKPQGPSDSVPAGKVSAAVA 443 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 LADK+DTL+ F+AI EKP+GSKDPYALRR+ LG++RII E+ + L ++ Sbjct: 444 LADKIDTLVGFFAIGEKPTGSKDPYALRRSALGVLRIIREHGATLHLGGLVDAWYRSRGE 503 Query: 531 -----------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 ++ FF DRLK+ L D R D++EA +D+++ + I+ + Sbjct: 504 LPVAVQDVEAVRPEVLDFFADRLKVQLRDEGRRFDVLEA--TRGSDDVVNTITRIEAVEA 561 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 ++ +GE L KR ILA + + + EK L ++ + + Sbjct: 562 VIATPQGEDLLTLHKRAANILAASKTDLSHAMPQAYEG--IDPLEKALLEALNVARSDVV 619 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + Y + ++ + ++ F D VLVN DD +V+ NRL++L+ + + + ++ Sbjct: 620 SHISEENYAGALKSIAALRQNVDSFLDGVLVNADDEKVKVNRLAILRGVCELSAPIADLS 679 Query: 700 KIV 702 KI Sbjct: 680 KIA 682 >gi|255019756|ref|ZP_05291833.1| Glycyl-tRNA synthetase beta chain [Acidithiobacillus caldus ATCC 51756] gi|254970824|gb|EET28309.1| Glycyl-tRNA synthetase beta chain [Acidithiobacillus caldus ATCC 51756] Length = 695 Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 210/722 (29%), Positives = 329/722 (45%), Gaps = 63/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PA+ Q + + I GLL E G+ + + + P RL L ++ L+ Sbjct: 6 DLLLEIGCEELPAQEQPRLLQAAPEIFQGLLDEAGIAFGVVHGFVGPRRLALLVEDLALE 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E R GP + G A GF RS G+ + ++ D KG V + Sbjct: 66 TQAREEWRRGPSLDRAFTADGQPSAAALGFARSCGVAPDALEELATD--KGPVLAFRVVT 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + +L I +Q +P K MRW + RP++ ++ L + ++ Sbjct: 124 PAQSSARLLPGIAQRWLQTLPLRKRMRWGERDD-----RFSRPVRWLVLRLGS-----QV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHR H P + + L Y L EA V D RR IL + L Sbjct: 174 LPWQSFGLEAGAASRGHRVHHPEAVPLPVLRDYPTLLREAKVRADWHERRQHILRELSCL 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + + D L +EI GL EW GSFD YL +PE ++R + +Q+ R Sbjct: 234 AEKLGAQALLDDALADEITGLNEWPVALAGSFDPDYLRVPEAVLRTVMVQHQRYVPLRGG 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G LA ++ ++NI + D +V+GN RV+ ARL DA FW +D+ Sbjct: 294 DGRLAPHYLFIANIASRDP-QVVVRGNDRVLRARLADAAFFWDQDRR------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L R+ LD L +F +G+ E+ R+ L + +A D A Sbjct: 340 -------RSLASRLPELDAL--LFQDGLGSMAEKSHRLEALARSLAVAFGLDPRAAAHAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L KADL T +V EFPELQG +G YA E+ + AI E +P G + +P + + Sbjct: 391 RLCKADLLTGMVGEFPELQGIMGGHYARHDGEDEAIATAIAEQYRPAGRDDPLPESPLGR 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 ++LADK DTL F+AI + PSG +DP+ LRRA LGI+RI LE + L Q + Sbjct: 451 ILALADKADTLWGFFAIGQIPSGDRDPFGLRRAALGILRIALEGS-GLSLRQLLRAAADG 509 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F +RL++ L D D I+A+L D+ + ++ L Sbjct: 510 YGASLHLADPEAVTESAWAFVQERLRVLLRDEGFAADQIQAVLAVAGDDPIAARRRLESL 569 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 EF + L + I +I + K++ + +P L AE L+ S Sbjct: 570 AEFLRLHESADALAAL--IKRINNLLRKEDLGSLPQCNPDRLQEPAEIALWREYSALQEA 627 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + + DLL + ++ FF ++LV +D +R NRL+LL I+ L + + Sbjct: 628 LIPLLAAGDFAASLDLLAGLRSAVDRFFQEILVLCEDARLRANRLALLAQIQKSFLQIAD 687 Query: 698 VQ 699 Sbjct: 688 FS 689 >gi|323524767|ref|YP_004226920.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. CCGE1001] gi|323381769|gb|ADX53860.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1001] Length = 700 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 208/716 (29%), Positives = 341/716 (47%), Gaps = 62/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + Y TP RL + +K + +PE+ + E+ Sbjct: 19 PPKALARLGDAFAEGIAERLAARDLIEGELSFERYATPRRLAVTVKNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P + G + L + G ++SD + +D K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVSDLERAQD-GKAEAFFLRYAAPGATLAE 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L+ + + K+P PK M + S ++RP + + E ++ + Sbjct: 138 GLQGALDETLAKLPIPKVMTYQRPDG--SNVQFVRPAHRLTAL-----HGEHVVPVSALG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 I + T GHRF + +++Q D Y+ L + V+ + R+ I H LA A G Sbjct: 191 IDADDTTLGHRFLSEGFVQIQHADSYVDTLMHKGRVVPNFADRKETIRT--HLLAHADGD 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 QVVMPEALLDEVTSLVEWPVVYSCRFEAEFLQVPQECLILTMQTNQKYFALTDANGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ + G I++GN RVV RL DA F+++D+ Sbjct: 309 RFLIVSNIETATPGD-IIEGNERVVRPRLADAKFFFEQDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 KPL R+ L +VV+H K+G+ +RV R+ L IA L ADVAL RA L+KAD Sbjct: 349 -KPLADRVPLL--ANVVYHNKLGSALQRVERLESLAGAIAALTGADVALAKRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +P V+LAD Sbjct: 406 LITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPATATGTVVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------- 528 KL+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + Sbjct: 466 KLETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPVDFVELLRTAHAQFAALPN 525 Query: 529 --IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Q + F DRL+ L +R I+A+L L IV + + EF + + Sbjct: 526 VTDSTQAIYEFSMDRLRGLLRERGHAPGEIDAVLALNPTRLDDIVARLDAVREFAALPEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KRI IL E S + P L+ AEK L+A + +Q + + Sbjct: 586 ASLAAANKRISNILKKSE--GATASGGVQPALLVEAAEKALFAQLEQVAPRVQSQLAARD 643 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 YTGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRLA 699 >gi|294669014|ref|ZP_06734100.1| glycyl-tRNA synthetase, beta subunit [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309006|gb|EFE50249.1| glycyl-tRNA synthetase, beta subunit [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 687 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 214/707 (30%), Positives = 352/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P ++ + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKVLNNLGNHFAASVAEGLEKAQLIDGEAEYTAYASPRRLAVQIKNVKAIQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELGE----VNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNRLAKQMNAVADI 682 >gi|283850610|ref|ZP_06367897.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. FW1012B] gi|283573853|gb|EFC21826.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. FW1012B] Length = 697 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 195/730 (26%), Positives = 321/730 (43%), Gaps = 64/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL EI EE+PAR A ++ + L + + + + TP RL + + L+ Sbjct: 1 MSHFLFEIGFEEMPARFLSGLASEVRTLFTDALAQAKLDASAVTAFATPRRLVVSIPELA 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S + E GP G A GF + G + KG Sbjct: 61 ADSRREEELVTGPPERVGFDASGNPTPAAVGFAKGQGKDVADV--FVMETGKGRYLALNK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +L + A++K+ +PK MRW + F++ RP+ L +L + Sbjct: 119 TTGGEPAMALLPGMCLEAVKKLSFPKRMRWGSRD-----FAFGRPVHWFLALL-----GD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 ++ +L I G T GHR P P V + Y + + V+LD R + + + A Sbjct: 169 AVVPFELDGIVSGRRTRGHRIMGPGPFDVAAAKDYFGIIRDQGKVVLDARERESLVRSQA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G V + LL E+ GL E V +G D K+L +P E++ +++T+QK F Sbjct: 229 ETLAREAGGTAVINPALLAEVTGLTEHPVVLLGRLDPKFLDVPREVLITSMETHQKSFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ + + + +G RV+ ARLEDA FW+ D Sbjct: 289 EDGKGGLLPVFLTTLGLVPGN-VDLVRRGWQRVLTARLEDARFFWEAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L+ L+ +L+ VVF A +G+ ++ R+ L +A+ +++ Sbjct: 336 --------LATDLETWQKKLE--SVVFLAGLGSMRDKARRLERLCGVVAEQAGKPEVMLE 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +A L+K DL +++V EF ELQG +G Y + ++ + AI E P GP VP Sbjct: 386 ASQAGGLAKVDLVSDMVGEFAELQGIMGGIYVRRKGQSKTVSRAIAEQYLPAGPDSPVPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +SLADK DTL + ++ P+G+ DPYALRRA LGI RI++E+ + + L + ++ Sbjct: 446 TLAGAVLSLADKADTLAGCFGLDMAPTGAADPYALRRAALGICRIVIEHGLRLNLMELLQ 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L+ FF RLK Y R ++EA ++ + Sbjct: 506 AALDGYGEVKFKVDRTHILARLLDFFGQRLKAYFTGRGFDTLVVEAAAGASFTDIAELAA 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVI 631 I L F + + +L+ KR I+ + + ++ + L +AEK L AV Sbjct: 566 RIPALAAFAAKPDFGQAVLTFKRAANIIRKQGVGAGQPLTGLVKAALLEEQAEKDLAAVC 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +D + Y + DLL+ + ++ FFD V+V DD +VR NRL+LL+ + + Sbjct: 626 ADVFPRYDALFEAGDYAGVLDLLYELRPTVDAFFDNVMVMCDDMDVRLNRLNLLKSLVDR 685 Query: 692 ILIVINVQKI 701 + V + + Sbjct: 686 LGRVADFAAL 695 >gi|239906721|ref|YP_002953462.1| glycyl-tRNA synthetase beta chain [Desulfovibrio magneticus RS-1] gi|259511922|sp|C4XS54|SYGB_DESMR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|239796587|dbj|BAH75576.1| glycyl-tRNA synthetase beta chain [Desulfovibrio magneticus RS-1] Length = 697 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 194/730 (26%), Positives = 329/730 (45%), Gaps = 64/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FL EI EE+PAR +++ + L + V + + TP RL + + L+ Sbjct: 1 MSHFLFEIGFEEMPARFLPGLVDEVKKLFAEGLTQAKVDCGTIAAFATPRRLVVSVPDLA 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + E GP GA KA +GF + GL + D KG Sbjct: 61 AAARREEEVVSGPPEKVGFDAAGAPTKAAEGFAKGQGLDVSAV--FVMDTPKGRYLALRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++L + A++K+ +PK MRW + F++ RP+ L +L + Sbjct: 119 TTGGEAAIELLPALCLEAVKKLSFPKRMRWGSRE-----FAFGRPVHWFLALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 ++ +I G TYG R P P +V + Y + + V+LD R + + A Sbjct: 169 AVVPFQFDDITSGRATYGQRIMGPGPFEVPTAAAYFDIIRDKGKVVLDAREREGIVRSQA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA G V + LL E+ GL E V +G FD K+L +P E++ +++++QK F Sbjct: 229 EALAKEAGGTAVINPALLAEVTGLTEHPVVLLGRFDPKFLDVPREVLITSMESHQKSFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ + + + +G RV+ ARLEDA FW+ D Sbjct: 289 EDGKGGLLPVFLTTLGLVPGN-VELVRRGWQRVLTARLEDARFFWEAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 LS L+ +L+ +VVF A +G+ ++ R+ L IA+ +++ Sbjct: 336 --------LSASLETWQKKLE--NVVFLAGLGSMRDKGKRLERLCGLIAEQAGKPEIMLE 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +A L+K DL +++V EF ELQG +G Y+ + ++ + A+ E P GP VP Sbjct: 386 ASQAGGLAKVDLVSDMVGEFAELQGIMGGIYSRRKGQSKTASRAVAEQYLPAGPDSPVPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S+ADK DTL + ++ P+G+ DPYALRRA LGI R+++E+ + + L + ++ Sbjct: 446 TLAGAILSIADKADTLAGCFGLDMAPTGAADPYALRRAALGICRVVIEHGLRLDLMELLQ 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L+ FF RLK Y + ++EA L ++ + Sbjct: 506 GAIDGYGEVKFKVDRTHVLAKLLDFFGQRLKAYFTGQGYDTLVVEAALGASYTDIAALSA 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVI 631 + L F + ++ +L+ KR I+ + ++ + L +AEK L AV Sbjct: 566 RLSALAGFAAKPDFDQAVLTFKRAANIIRKQGVGAGVPLTGAVKAALLEEQAEKDLAAVC 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D D Y + +LL+ + ++ FFD V+V DD ++R NRL+LL+ + + Sbjct: 626 QDVFPRFDALFDAGDYGAVLELLYELRPSVDAFFDNVMVMCDDMDMRLNRLNLLKSLVDR 685 Query: 692 ILIVINVQKI 701 + V + + Sbjct: 686 LGRVADFAAL 695 >gi|294676756|ref|YP_003577371.1| glycyl-tRNA synthetase subunit beta [Rhodobacter capsulatus SB 1003] gi|294475576|gb|ADE84964.1| glycyl-tRNA synthetase, beta subunit [Rhodobacter capsulatus SB 1003] Length = 754 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 256/778 (32%), Positives = 384/778 (49%), Gaps = 103/778 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ A + L ++ L E G+ Y + + + TP RL L L GLS Sbjct: 1 MPELLIELFSEEIPARMQAMARDTLRKMVTDGLVEAGLTYGHAQAFSTPRRLVLVLDGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP EER GP A + A+ GFLRSTGL K+D KKG V+ AV+ KP R Sbjct: 61 TESPTLREERKGPATTAPEAALQGFLRSTGLTLDQLE--KRDDKKGQVWFAVIEKPGRAA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PWPKSMRW W+RPL SILC+L ++D ++DLD+ Sbjct: 119 PEIVAEVLEKTIRSFPWPKSMRWGNG-----TLKWVRPLHSILCLL-SDDTGASVVDLDI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP V Y L+ A V+LD R I +DA +LA A G Sbjct: 173 DCIKAGATTAGHRFMAPDRFTVTGFADYAAKLKAAKVVLDSAEREAMIWHDATQLAFAQG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED+ LL E+ GLVE+ MG+ + +L LP E+++ +++ +QK F R+ + Sbjct: 233 LELVEDRGLLTEVAGLVEFPVALMGAIAEDFLHLPPEVLQTSMREHQKFFSVRSPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D GA I++GN +V++ARL DA FW+ D + A Sbjct: 293 EGFVTVANRETADHGATILKGNLKVLSARLSDARFFWEHDLRVVKTEGLEGMGA------ 346 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+G+Q R+ RI L ++IA L+ AD ++A ++ K+ Sbjct: 347 ------------GLANVTFHNKLGSQKARIDRIAALAREIAPLVKADPDQAEKAALVVKS 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL + +V EFPELQG +G YA Q A + H P GP + VP+ +++ V+LA Sbjct: 395 DLRSAMVGEFPELQGLMGSYYARAQGLPEEIATACKGHYSPLGPSDAVPSEPVTVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL----SQFIEDQNLIL 536 DK+DTL FWAI+EKP+GSKDP+ALRRA LG+IR++L N + + L S+ + I Sbjct: 455 DKIDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLGNGLRMGLERVISKIFTQRANIA 514 Query: 537 FFHDRLK-LYLHDRDIRHDLIEAILR---------------------------------- 561 D ++ L + + L EA++ Sbjct: 515 TLGDWVRETELEQEETKSALYEALINEDLASYAEGHEAKLAELASSFFGGVKPTPSKHHG 574 Query: 562 ----PENDNLLTIVDLIK-----------HLNEFFSSAKGEKFLLSAKR----------- 595 +D L D +K ++ + + L KR Sbjct: 575 QARQSSSDLLSFFHDRLKVFLKDEGIRHDVIDAVLAMPGNDDLTLVVKRAEALSAFLKTE 634 Query: 596 -----------IFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 IL E K+ E S ++ ++AE+ L+A + + +M Sbjct: 635 DGTNLIQGFKRANNILTQAEAKDGVEYSFGADVKFAEVDAERALFAALDAAEAALAPAMQ 694 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + PI+ FF V +N ++ VR NRL+LL I+ I V ++ K+ Sbjct: 695 SEDFATAMAEMAKLRAPIDAFFTAVQINAENPIVRRNRLNLLSRIRQICQSVADLTKL 752 >gi|307153543|ref|YP_003888927.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7822] gi|306983771|gb|ADN15652.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7822] Length = 717 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 193/723 (26%), Positives = 334/723 (46%), Gaps = 75/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA +A + L+E+ + Q + Y TP RL + +K L Sbjct: 1 MPSFLLEVGTEELPASFVDEAIAQWQNRIATSLEEQLLTPQGIEIYGTPRRLAVLIKELP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G KA++GFL G+ + ++ KGD + Sbjct: 61 TKQPDREEEIKGPAANVAFSNGKPTKALEGFLTRQGVAPENVE--IRNTNKGDFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L+ + P I ++ + MRW + RP++ ++ + E + Sbjct: 119 IIGRTTTEILQELAPQWITQLEGRRFMRWGDGD-----LRFPRPIRWLVALWDKEVLPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + +++GHR P + + + Y + L++A V + P RR++I + Sbjct: 174 LVNGGTL-LKSDRLSWGHRILHPEAVSIPEANAYQKSLQQAYVEVSPHQRRSSIKQQIEK 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT-- 292 A + V +LL+E++ LVE+ +G FD ++L LP E+I + T+Q+ F Sbjct: 233 AAKPLKGVAVIPPELLDEVVNLVEYPTAVVGKFDAEFLNLPTEVITTVMVTHQRYFPVQT 292 Query: 293 ---RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +T + L FI ++N I GN RV+ ARL DA F+K D + Sbjct: 293 STKKTNDSTLLPHFITIANGDPKKA-DLIASGNQRVIRARLADAQFFYKADCD------- 344 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +PL+ + +L+ V F ++GT ++V RI + + I + ++ + Sbjct: 345 -------------QPLESYLPQLET--VTFQEQLGTIRDKVDRIMEISQLIVEQLELEQQ 389 Query: 410 L---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 ++ +L KADL T++V EFPELQG +G++YA++ E+ + I EH PRG + Sbjct: 390 ERTEIESTAMLCKADLVTQMVYEFPELQGVMGQKYALVSGESPNVAQGIFEHYLPRGADD 449 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + V LAD++DTL++ + + P+GS DP+ALRRA G+I++ + I L Sbjct: 450 MMPESLTGQVVGLADRIDTLVSIFGLGMIPTGSGDPFALRRAATGVIKVTWYADLPIDLL 509 Query: 527 QFIED----------------QNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEN----- 564 IE + L F RL L D I +DL+ A+L + Sbjct: 510 ALIEQSSEDFVTAHPDKTSPVEALKSFLIQRLSTLLQDDLKIDYDLVNAVLGENDPEYAQ 569 Query: 565 ---DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYL 619 ++LL + D + L E ++ K E+ + R ++ + +E+ I P Sbjct: 570 RALEDLLDVRDRAQFLQEIRNNKKLEEIYETVNRSARLAVKGDLNTQELDPPKVIRPDLF 629 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDRE 676 +EK+ Y + D Q + + Y + D L I + FF D VLV ++ E Sbjct: 630 EKSSEKQFYEALIDLVPTTQTAQAERNYQLLVDALAKIAPTVSNFFDGDDSVLVMDENPE 689 Query: 677 VRD 679 +R Sbjct: 690 IRQ 692 >gi|167568847|ref|ZP_02361721.1| glycyl-tRNA synthetase subunit beta [Burkholderia oklahomensis C6786] Length = 699 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 204/715 (28%), Positives = 339/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAACDLIEGELAFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K D + P + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGRPNLSIADLERAHDGKADAFFVNYAAPGASLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + E+++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HDERVVPVSAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L E+ V+ R+ AI A G E Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHASAYADTLREKGRVIAHFAGRKEAIRTQLDAHAE--GDE 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+Q R+ R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSQLARIERLETLAGEIAPAIGADATIAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACTEHYQPRFSGDTLPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L L IV + + EF + E Sbjct: 527 AESTDAIYAFFIDRLRGLLRERGYSAGEVDAVLSLNPTRLDDIVARLDAVREFARLDESE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L+ +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEAAEKALHEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|119487891|ref|ZP_01621388.1| glycyl-tRNA synthetase beta subunit [Lyngbya sp. PCC 8106] gi|119455467|gb|EAW36605.1| glycyl-tRNA synthetase beta subunit [Lyngbya sp. PCC 8106] Length = 717 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 190/721 (26%), Positives = 334/721 (46%), Gaps = 75/721 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA +A + ++ L+E+ + +++ Y TP RL + ++GL Sbjct: 1 MPSFLLEVGTEELPAPFVEQALQQWRRLIPTTLEEQFLQSESIDVYGTPRRLAVVIRGLP 60 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP A KA GF + G++ + + +I+ KGD + Sbjct: 61 QQQADRDEEIKGPPASAAFKNDQPTKAAVGFAKKQGVE-LDELEIRPTE-KGDFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R D+L ++P I K+ + MRW + RP++ ++ +L + Sbjct: 119 IAGRPTADILTELIPQWITKLEGKRFMRWGDGE-----LKFPRPIRWLVVLLDDKILPVT 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ I+ GHR P I++ + Y+ L + + +DPE R+ I + Sbjct: 174 LVSGS-DKVESNRISQGHRVLHPEAIEISTATDYLDSLRQGFIEVDPEQRKTTIEAEIKT 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++G +LL E+I LVEW +G F+ ++L LP E+I+ + T+Q+ F Sbjct: 233 ASKSIGGNAEIPDELLAEVINLVEWPTAVVGKFEDEFLNLPPEVIKTVMVTHQRYFPVLE 292 Query: 295 R----EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + L + FI +SN + I GN RV+ ARL D F+K D Sbjct: 293 TAKSVQSPLKSYFITISNGDPAKSN-IIAAGNERVIRARLADGQFFYKSD---------- 341 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA- 409 L +PL+ + L+ V F K+G+ ++V+RI + I+Q + Sbjct: 342 ----------LKQPLEAYLPNLET--VTFQEKLGSVRDKVNRIGQVADLISQQLQVSPTE 389 Query: 410 --LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + R+ +L KADL T++V EFPELQG +G++YA E + AI EH PRG ++ Sbjct: 390 HTQIQRSALLCKADLVTQMVYEFPELQGIMGEKYARECGEPDAVATAIFEHYLPRGATDS 449 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + V LAD+LDTL++ + + PSGS DP+ALRRA ++ I E + I L Q Sbjct: 450 LPQTLVGQVVGLADRLDTLVSIFGLGMIPSGSSDPFALRRAANAVVNITWEANLTINLHQ 509 Query: 528 FIED-----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEN----- 564 +E L FF R++ L D ++I +DL+ A+L ++ Sbjct: 510 LLEQLVAEFTRNYDKVIPDLLSQLYEFFLQRIRTLLQDEKNIDYDLVNAVLGEDDPEYTE 569 Query: 565 ---DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYL 619 +LL + + L + ++ + R ++ + ++ + ++P+ Sbjct: 570 RALKDLLDVRERATFLQTIRQDSSLDQIYETVNRSTRLAKQGDLDTVQLQPKKLVNPKLF 629 Query: 620 LLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDRE 676 +E++ Y + + + + Y Q+ D L I + FFD VLV ++ E Sbjct: 630 AKSSEEQFYQALIALVPKTEAAQKTRNYRQLVDALAEIAPTVSTFFDGPESVLVMDENPE 689 Query: 677 V 677 + Sbjct: 690 I 690 >gi|254414262|ref|ZP_05028029.1| glycyl-tRNA synthetase, beta subunit [Microcoleus chthonoplastes PCC 7420] gi|196178937|gb|EDX73934.1| glycyl-tRNA synthetase, beta subunit [Microcoleus chthonoplastes PCC 7420] Length = 722 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 192/719 (26%), Positives = 328/719 (45%), Gaps = 73/719 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L L E + ++++ Y TP RL + ++GL Sbjct: 9 MPTFLLEVGTEELPANFVESAIKQWQSRLSQSLDEYLLTPESIQVYGTPRRLAILIQGLP 68 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP V A KA +GF R G+ + D +I++ KKG+ V + Sbjct: 69 RQQPDREEEVKGPPVKAAFKDGKPTKAAEGFARKQGVS-LDDLEIRET-KKGEFVFVVKK 126 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L ++P I + + M W + RP++ ++ +L + Sbjct: 127 IIGRSAIEILPEVIPQWIFGLEGKRFMCWGDGD-----LRFSRPIRWLVALLDDTVLPIE 181 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + I + GHR P + + + Y++ LE A V+++ + R+ I + Sbjct: 182 LVNGS-ETIKSDRTSRGHRILHPESVTIAKAEDYVKSLESAFVIVERDRRKQIIQDQVQS 240 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A + + ++L +E+ LVE+ +G FD +YL LP E+++ + +Q+ F Sbjct: 241 AAQKLKGHTLLYEELWDEVTDLVEYPTAIVGQFDAEYLILPPEVVKTVMVKHQRYFPVFK 300 Query: 295 REG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L FI +SN + I GN RV+ ARL D +F+K D Sbjct: 301 DETATELLPHFITLSNGDP-EKSEIIAAGNERVIRARLADGEYFYKTD------------ 347 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---A 409 L+ PL+ + +L+ V F ++G+ ++V RI +IA+ + Sbjct: 348 --------LASPLESYLPKLET--VTFQDELGSMRQKVGRIEKTASRIAEQLAVSQKQWD 397 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA L KADL T++V EFPELQG IG++YAV+ E+ + AI EH PRG + +P Sbjct: 398 DIIRAAALCKADLVTQMVYEFPELQGVIGQKYAVVSGESEAVATAIFEHYLPRGAGDKLP 457 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V LAD+LDTL++ + + P+GS DP+ALRRA ++ I E + I L Q + Sbjct: 458 ETLTGQVVGLADRLDTLVSIFGLGMIPTGSSDPFALRRAANAVVNITWEGNLGINLDQLL 517 Query: 530 ED----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEND------- 565 +D + L FF R++ L D + I +DL+ A+L + Sbjct: 518 QDVSADFVATYSEKSSPVEALQEFFIQRIRTLLQDEQKIDYDLVNAVLGENDREYTQRAL 577 Query: 566 -NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK--NREISLEISPQYLLLE 622 ++L + D L + K ++ + R ++ + + + P Sbjct: 578 KDVLDVRDRALFLQGIRKNGKLDEIYETVNRSARLSMQGDLDFQQLDPKAVVRPDLFEKS 637 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ----VLVNVDDREV 677 +E Y + Q + + Y QI D L + + FFD V+V ++ E+ Sbjct: 638 SEPAFYDALVALVPRTQAAQQERNYQQIVDALAEVTPIVSTFFDDKEAGVMVMDENPEI 696 >gi|284928750|ref|YP_003421272.1| glycyl-tRNA synthetase beta chain [cyanobacterium UCYN-A] gi|284809209|gb|ADB94914.1| glycyl-tRNA synthetase beta chain [cyanobacterium UCYN-A] Length = 712 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 200/739 (27%), Positives = 343/739 (46%), Gaps = 71/739 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+P +A I+ LK+ + +++ Y TP RL + + GL Sbjct: 3 FLLEIGTEELPTSFVDRAINQWKQIIPTSLKKNFLSSESIFVYGTPRRLAVIITGLLDKQ 62 Query: 64 PEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP V A A++GFLR ++ I +I+ KKG+ + Sbjct: 63 TDRNELIKGPSVKAAFTEGKPTIALEGFLRKQNVE-IEALEIRST-KKGECVFVDKKIQG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 ++L ++ I + + M+W F + RP++ I+ + ++ KI + Sbjct: 121 IKTTEILPELINAWIGGLEGKRFMKWGNGD-----FKFSRPIRWIVSLCDSQILPIKIEN 175 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 D I + +YGHR P PI + Y+ L+ A V +DP R N I ND +A Sbjct: 176 GDSV-ITSSSFSYGHRVLRPGPINIPHAASYVDILKSAYVEVDPARRYNIIENDIKTIAE 234 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-RE 296 + +LL+E++ LVE+ +G+F++++L LP+E+I+ + +Q+ F + Sbjct: 235 NAKGVIDTSHELLKEVVNLVEYPTAILGTFNEEFLELPDEVIKTVMIKHQRYFPIKKISS 294 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L + FI +SN S I QGN +V+ ARL DA F+ D N Sbjct: 295 NQLLSQFISISNGDPS-KSTIITQGNEKVLKARLSDAQFFYASDSN-------------- 339 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD---R 413 + L + +L+ +V F ++G+ +V RI + K+++ + ++ R Sbjct: 340 ------QSLSSYLPKLE--NVTFQKELGSIRNKVDRIINISKQVSNQLQFTPQQIEEVLR 391 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L KADL T++V EFPELQG +G++YA++ E I +H PRG + +P + Sbjct: 392 TALLCKADLVTQMVYEFPELQGIMGQKYALVSGELEIVAQGIFDHYLPRGHDDQMPKSLT 451 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--D 531 I V +AD+LDTLI + + P+GS DP+ LRRA II I +++ I LS I Sbjct: 452 GIVVGIADRLDTLIGIFGLGMIPTGSSDPFGLRRAANAIISIAWGSQLSINLSGLISEGC 511 Query: 532 QNLIL--------------FFHDRLKLYLHDR-DIRHDLIEAILR--------PENDNLL 568 Q+ +L FF R++ L D I +DL+ A+L ++ Sbjct: 512 QSFLLNNPEQKSPLKSLRNFFAQRIQSLLQDEMGIDYDLVNAVLGDVESEYIERAFQDIT 571 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI--SPQYLLLEAEKR 626 + + L ++ EK + R ++ E S + +E++ Sbjct: 572 DLKKRAQFLQNIRNNGILEKVYQTINRSTRLAKQGNLGYEEFSPSVIIDNNLFKKLSEQQ 631 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREVRDNRLS 683 LY + + I + +K Y + L +I ++ FFD VLV ++++V+ NRL+ Sbjct: 632 LYDSLINLEPTINFVVTNKDYDLLMKGLINIIPLVDEFFDGKNSVLVMDENQKVKQNRLN 691 Query: 684 LLQYIKNIILIVINVQKIV 702 LL ++N I+ + +IV Sbjct: 692 LLGILRNYGRILADFGEIV 710 >gi|172056865|ref|YP_001813325.1| glycyl-tRNA synthetase, beta subunit [Exiguobacterium sibiricum 255-15] gi|171989386|gb|ACB60308.1| glycyl-tRNA synthetase, beta subunit [Exiguobacterium sibiricum 255-15] Length = 686 Score = 683 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 201/716 (28%), Positives = 346/716 (48%), Gaps = 70/716 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 +PAR ++ L + L E + + + + TP RL + + G+S + E G Sbjct: 13 MPARFVLQSETQLKERVTTFLNEARITFDTIESFSTPRRLAVLVTGMSERQTDLEETLKG 72 Query: 73 PRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 P G KA GF R GL T D ++ K + A ++ + +L Sbjct: 73 PAKRIAQDEDGNWTKAAQGFARGKGLTT--DDLFLQEEKGVEYIFATRKESGQETATLLP 130 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 + ++ + +PK+MRWST + ++RP++ ++ +L +++I ++ ++ Sbjct: 131 G-LKQIVEAMSFPKNMRWSTQ-----SLRYMRPIRWMIALL-----DDQVIPFEVADVAT 179 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G + GHRF I + + Y+ L V+ E RR I +L+ G E+ Sbjct: 180 GRTSRGHRFLGQD-ITILRPNAYVEALAGEHVIASYEQRRQLIEEQIQQLSEQEGFEVPI 238 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D LLEE+ LVE+ G+FD+ YL LPEE++ T+K +Q+ F + ++G L + F+ Sbjct: 239 DPALLEEVTNLVEYPTALFGAFDEAYLELPEEVLITTMKEHQRYFPVK-KDGTLLHYFVT 297 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A+ + +GN +V+ ARL DA F++ D+ + Sbjct: 298 VRNGNAT-HIENVARGNEKVIRARLADAQFFYEEDKKAD--------------------I 336 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 D + ARLD +VFH K+GT GE+V R+R + ++A+ +AD V+RA + K DL ++ Sbjct: 337 DAQAARLD--KIVFHEKLGTTGEKVRRVREMALQLAERFNADSTKVERAGTIYKFDLVSQ 394 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EF ELQG +G+ YA ++ E++ AI EH PR + P+ +++ DK+D+ Sbjct: 395 MVYEFTELQGMMGERYANMKGEDVEVAAAIREHYLPRFAGDESPSTPTGTVLAVLDKMDS 454 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------------- 531 + F+ + PSGS DPYALRR GI++I+ + +I++ LS+ I+ Sbjct: 455 VGGFFGVGMIPSGSADPYALRRQAQGIVQILSDRQIEMTLSELIDFVVSAQLKAGLYQAD 514 Query: 532 -----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + FF+ RLK L ++ RHD+IEA L P+ LT+ K + + + Sbjct: 515 AETVKAAMEDFFNQRLKFRLSEKGYRHDVIEAALDPK----LTVEANEKRASMLEQATQQ 570 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 F + +++ ++L I +K E + ++P +AE+ L+ I ++ ++ Sbjct: 571 PTFKKTVEQLSRVLNISKKA--ETVVAVNPALFENDAERDLHEQIEQLIPKVEAAVQASD 628 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y Q +L S I +FD ++ DD VR NRLS ++ I V + Sbjct: 629 YDQAIQVLESSVPAITAYFDGTMIMADDEAVRTNRLSEMKRFATAIEQVARFNALT 684 >gi|282850265|ref|ZP_06259644.1| glycyl-tRNA synthetase, beta subunit [Veillonella parvula ATCC 17745] gi|282579758|gb|EFB85162.1| glycyl-tRNA synthetase, beta subunit [Veillonella parvula ATCC 17745] Length = 683 Score = 683 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 200/728 (27%), Positives = 335/728 (46%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADTSAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ + +L Sbjct: 115 TKTAGVPAKDIVTDMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWFVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVKSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDMAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +EG L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQEGKLLPMFLTVRNG-SDYSIEVVQAGNERVLRARLDDAKFFFNEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--IDADVAL 410 KPL R L +VF +G ++ R+ LG+ + + D A+ Sbjct: 334 ----------KPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDAAV 381 Query: 411 V-DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESEEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 442 QTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPIF 501 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +L FF RLK DR++ H +I+ +L ++ L Sbjct: 502 KASMELLNVPAEKQDELLDQVEEFFTLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + + + + R++ ++ E ++ L +AEK L+ + Sbjct: 562 VNALLA-NRIDENVELVQAYTRMYNLVKDVEYTG------VNSDLLKEDAEKALFEAATK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASSAAWEAGDYDAVVAVPATLVPAINKFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|222109760|ref|YP_002552024.1| glycyl-tRNA synthetase subunit beta [Acidovorax ebreus TPSY] gi|254781847|sp|B9MCM4|SYGB_DIAST RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|221729204|gb|ACM32024.1| glycyl-tRNA synthetase, beta subunit [Acidovorax ebreus TPSY] Length = 720 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 216/747 (28%), Positives = 354/747 (47%), Gaps = 79/747 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L+ L+ +G+ + + + +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAGVLLEQLQAQGLTSAHSQLTAFASPRRLAAHITEVL 64 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAV 112 P + +K + ++L P G A+ L + G S Q+K+ K +V Sbjct: 65 PAAADKAVSQKLMPVAVGLDASGQPTPALLKKLAALGADAASVPQLKRVHDGKAEVLFFE 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 L+ D L+ + AI K+P PK MR+ ++ ++RP ++ + +E Sbjct: 125 SMAKGALLADGLQKALDEAIAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVALHGSEV-- 181 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 ++ + + GN T+GHRF A P+ +QS D Y L E V+ RR I Sbjct: 182 --LVGVQALGLTAGNTTHGHRFEASVDPVVIQSADSYAEQLRSEGAVIASFAERRAEIAR 239 Query: 231 DAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A VG ++D LL+E+ LVE V + F+K +L +P+E + LT+K NQK Sbjct: 240 QLQAAADRVGGGVRPIDDDALLDEVTALVERPNVLVCEFEKDFLAVPQECLILTMKANQK 299 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F EG L + F++VSNI D +A++QGN RVV RL DA F+ +D+ Sbjct: 300 YFPLLDAEGKLTHQFLVVSNISPQDA-SAVIQGNERVVRPRLADAKFFFDQDRK------ 352 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---- 404 K L R+ +L VV+H K+GTQGERV R+R + K IA + Sbjct: 353 --------------KTLVSRVDQL--AKVVYHNKLGTQGERVERVRHIAKAIATQLFTAL 396 Query: 405 ----------DADVAL------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN 448 + ++A VD A +L+K DL T++V EFPELQG +G YAV Sbjct: 397 AQGNAALDSQEGEIAQDYLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGYYAVSDGLP 456 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRA 508 AIE+H KPR + +P + + V+LADKL+TL+ + I P+G +DP+ALRR Sbjct: 457 DEVAHAIEDHYKPRFAGDALPRENVGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRH 516 Query: 509 TLGIIRIILENKIDIPLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDL 555 LG+IR+++E ++ + L L F +DRL L ++ Sbjct: 517 ALGVIRMLVEKELPLDLDALLASAVPAFGDKIEDTSAQLADFIYDRLAGSLREQGYSAQE 576 Query: 556 IEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 ++A++ L + I+ + F + + + KR+ IL KK E+ ++ Sbjct: 577 VDAVIALRPQRLALVPRQIEAVRAFATLEQAPALAAANKRVTNIL----KKAGEVDPHVN 632 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 + L AEK LYA + F D Y L + P++ FFD V+VN ++ Sbjct: 633 EELLQEPAEKDLYAALQRFVPEANAQFDSGDYTASLQTLAVLRAPVDAFFDDVMVNAEEL 692 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKIV 702 +R NR LL+ + + V ++ ++ Sbjct: 693 ALRLNRQGLLKKLHMAMNRVADLSRLA 719 >gi|299532684|ref|ZP_07046072.1| glycyl-tRNA synthetase beta subunit [Comamonas testosteroni S44] gi|298719319|gb|EFI60288.1| glycyl-tRNA synthetase beta subunit [Comamonas testosteroni S44] Length = 704 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 208/731 (28%), Positives = 361/731 (49%), Gaps = 61/731 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKG 58 + L+E++ EE+P + K + + ++ LK +G++ + + Y +P RL ++ Sbjct: 4 SNLLVELFVEELPPKALQKLGDAFAAVIFEQLKAQGLLASSESRLTAYASPRRLAAHITE 63 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYL 110 + P + +K + ++L P G A+ L + G + +K+ K + Sbjct: 64 VLPQAEDKAVSQKLMPVSVALDAEGKPTAALLKKLAALGADESAVAALKRQGEGKAEALF 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 L+ D ++ + A+ K+P PK MR+ ++ ++RP ++ + + Sbjct: 124 YESTAKGVLLTDGVQKALDEALAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVVMHGTQV 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRRNAI 228 +I + + G T+GHRF A P+ +Q+ D Y L EE V+ RR I Sbjct: 183 ----LIGVKALGLTAGAATHGHRFEAAVDPVVIQNADSYAEQLREEGAVIASFTERRADI 238 Query: 229 LNDAHRLASAVGLEL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 A +G ++ ++D LL+E+ LVE V + F+K++L +P+E + LT+K N Sbjct: 239 ARQLQAAAERIGGDVRPIDDPALLDEVTALVELPNVLVCEFEKEFLAVPQECLILTMKAN 298 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L + F++VSNIQ D +A+V GN RVV RL DA F+ +D+ Sbjct: 299 QKYFPLLDANGKLTHQFLIVSNIQPQDA-SAVVGGNERVVRPRLADAKFFFDQDRK---- 353 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L R+ +LD VV+H K+GTQGER++R+R + K IAQ + Sbjct: 354 ----------------KTLASRVEQLD--KVVYHNKLGTQGERIARVRAIAKSIAQQLGN 395 Query: 407 DV--ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 L D+A +L+K DL T++V EFPELQG +G+ YA +++ DAIE+H KPR Sbjct: 396 SELGRLADQAAMLAKTDLVTDMVGEFPELQGIMGRYYAQNDGLDVAVADAIEDHYKPRFA 455 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK---- 520 + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E Sbjct: 456 GDELPRGDVGVIVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKDLELD 515 Query: 521 --------IDIPLSQFIEDQ-NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + + L+ F +DRL ++ +EA+L + L + Sbjct: 516 LETLLVSTLPAFGDKIQDATPQLVEFIYDRLANMFREQGYSAQEVEAVLALQPQRLSDVQ 575 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL +K ++ +++ L+ +AEK LYAV+ Sbjct: 576 KRLEAVRAFAALPEAPALAAANKRVGNIL---KKAETDVQPQVNEALLVEQAEKELYAVL 632 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q+ Y L ++ ++ FF+QV+VN +D +R NRL LL + Sbjct: 633 QQVAPKAQQQFAAGDYTASLQTLAALRASVDAFFEQVMVNAEDPALRTNRLGLLASLHEA 692 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 693 MNRVADLARLA 703 >gi|167561612|ref|ZP_02354528.1| glycyl-tRNA synthetase subunit beta [Burkholderia oklahomensis EO147] Length = 699 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 204/715 (28%), Positives = 339/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAACDLIEGELAFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K D + P + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGRPNLSIADLERAHDGKADAFFVNYAAPGASLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + E+++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HDERVVPVSAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L E+ V+ R+ AI A G E Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHASAYADTLREKGRVIAHFAGRKEAIRTQLDAHAE--GDE 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+Q R+ R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSQLARIERLETLAGEIAPAIGADATIAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACTEHYQPRFSGDTLPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L L IV + + EF + E Sbjct: 527 AESTDAIYAFFIDRLRGLLRERGYSAGEVDAVLSLNPTRLDDIVARLDAVREFARLDESE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L+ +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEVAEKALHEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|225025762|ref|ZP_03714954.1| hypothetical protein EIKCOROL_02666 [Eikenella corrodens ATCC 23834] gi|224941543|gb|EEG22752.1| hypothetical protein EIKCOROL_02666 [Eikenella corrodens ATCC 23834] Length = 687 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 212/710 (29%), Positives = 348/710 (49%), Gaps = 62/710 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L +I + Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLGRAQLIDGSAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I + I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IENLTIVYD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ +++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQSVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V+ R+ AI + A + + Sbjct: 184 GNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALNEQAGRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F+K +L +P+E + LT++ NQK F G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEKHFLAVPQECLILTMQQNQKYFPLLDPNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +K + V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDRLPESKTATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ + + L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLGVNELIQTTFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVTAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E + L EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELGE----VDESLLQQNEEKALYAAAQGLQPKIAAAVVEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ K+ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDPAVKQNRLNLLNCLAEQMNAVADITKL 685 >gi|313201807|ref|YP_004040465.1| glycyl-tRNA synthetase subunit beta [Methylovorus sp. MP688] gi|312441123|gb|ADQ85229.1| glycyl-tRNA synthetase, beta subunit [Methylovorus sp. MP688] Length = 701 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 203/729 (27%), Positives = 346/729 (47%), Gaps = 61/729 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + +K E S L+ +LK +G+ + + Y +P RL ++ + Sbjct: 4 NLLVELFVEELPPKALNKLGEAFSSTLLEVLKSQGLTSETSQVTAYASPRRLAAHISDVV 63 Query: 61 PHSPEKIEERL-GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 + +K P G A+ L + G + Q+K++ K D+ Sbjct: 64 AKAADKSLSHKLMPATVGLDANGKATPALLKKLTALGADESAVSQLKREHDGKADILFLE 123 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + L+ + A+ K+P PK M + ++ +++RP ++ + Sbjct: 124 GTAAGATLSEGLQKALDEALAKLPIPKVMTYQLQDG-WTSVNFVRPAHGLVAL-----HG 177 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 ++I + + GN T GHRF A P+ ++ DHY L E V+ RR I+ Sbjct: 178 NEVIPVSALGLQSGNTTQGHRFEAKVSPVTLRHADHYAEQLHTEGAVIASFAERRAEIVR 237 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A+ G L ++D+ LL+E+ LVE V +G F+ ++L +P+E + LT+K NQK Sbjct: 238 QLTAAAAKAGPQLTPIQDEALLDEVTALVERPNVLLGQFEDEFLQVPQECLILTMKANQK 297 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + +G L+N F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 YFPLLSADGQLSNKFLIVSNISPDDA-SAVIGGNERVVRPRLADAKFFFDQDRK------ 350 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 K L+ R+ LD VV+H K+G+QG+R +R+ + I Q + D Sbjct: 351 --------------KTLESRLTSLD--KVVYHNKLGSQGQRTTRVASIASAIGQQLGGDA 394 Query: 409 ALVDRAIVLSKA--DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A A DL T++V EFPELQG +G+ YA + + AIE+H KPR + Sbjct: 395 LASKAAQAARLAKADLVTDMVGEFPELQGIMGRYYAQHEGLDNDVAYAIEDHYKPRFAGD 454 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID---- 522 +P N++ + V+LADKL+TL + I + PSG KDP+ALRR LG++R+++EN + Sbjct: 455 ELPRNQVGVVVALADKLETLCGMFGIGQIPSGDKDPFALRRHALGVVRLLIENSLPLTLD 514 Query: 523 ---------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L F +DRL L ++ ++A+L E L I Sbjct: 515 TLLNTTFGCFAADVENASTALRSFIYDRLSGSLREQGYSAQEVDAVLALEPQQLADIAKR 574 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + E + KR+ IL +K ++ I+ L+ AE L ++ Sbjct: 575 LEAVKAFAALPEAESLAAANKRVGNIL---KKAEGDVQASINQALLVEPAELALAQALAS 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y L ++ P++ FFD V+VN +D ++ NRL LL + + Sbjct: 632 VTPQADAAFAAGDYRSSLQALAALRTPVDAFFDGVMVNAEDPALKANRLGLLASLHQAMN 691 Query: 694 IVINVQKIV 702 V ++ ++ Sbjct: 692 RVADLSRLA 700 >gi|242279452|ref|YP_002991581.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio salexigens DSM 2638] gi|242122346|gb|ACS80042.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio salexigens DSM 2638] Length = 697 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 206/730 (28%), Positives = 359/730 (49%), Gaps = 64/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DF+LEI EE+PAR + D+ I LL+E+ + ++ Y TP RL +++K ++ Sbjct: 1 MADFILEIGIEEMPARFVPRLGLDIKDIFSSLLEEKMIDNASVETYATPRRLTVFVKDMA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE GP G KA+ GF++S G+ ++ D KGD A Sbjct: 61 AVQRKVEEEVSGPPARIAYDADGNPTKALTGFVKSQGIALEDVYTLETD--KGDYLAAKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L I AI+K+ +PK M+W F++ RPL+ +LC+ + Sbjct: 119 TVGGGETIDILPEICVTAIKKLSFPKKMKWGNLD-----FAFGRPLRWLLCLFGTD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 +++ ++ +P G TYGHR P +V S D Y + E++ V++ PE R + + Sbjct: 170 -VVEFEMAGMPSGRQTYGHRVMGAGPWEVASADDYFDVIKEKSSVIISPEARGEHVRKEG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +LAS + +V LLEE+ LVE +G+FD+ +L LP+E++ +++++QKCF Sbjct: 229 DKLASELKGSVVWKDSLLEEVSNLVELPVPIIGNFDESFLELPKEVLLTSMESHQKCFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + +G L F+ N+ +D + +G +V+ ARLED FWK D Sbjct: 289 QKEDGELLPHFLCTLNLVPTD-VELVRKGWEKVLRARLEDGRFFWKND------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 L D + +LD +VVF +G+ G++ R+ L IA DA + + Sbjct: 336 --------LKTDFDTWLDKLD--NVVFLGPLGSMGDKSRRMERLAALIAGKTDASLQTEM 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+KADL +E+V EF +LQGK+G YA E+ C A+ E P GP VP+ Sbjct: 386 ARAGRLAKADLVSEMVNEFDKLQGKMGGIYASKCGEDDVVCKALYEQYLPAGPESPVPST 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + VS++DK DTL+ + +N+ P+G+ D YALRRA LGI+R+I++ + + + + ++ Sbjct: 446 LGGVIVSMSDKADTLVGCFGLNKIPTGANDTYALRRAALGIVRMIIQYDLRVDILEIMDM 505 Query: 532 -------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + L F +RL+ Y + +++A L ++ + Sbjct: 506 AFEGYSKDIKWKLEKSELLEKLGEFISNRLRAYFTGKGYETRVVDAALGAGYRDVTALKA 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVI 631 ++ L EF + E+ +L+ KR I+ + + ++ L EK L + Sbjct: 566 RVEALAEFAKADGFEQAVLTFKRAANIIKKQGSEQGVSLTGGFEVDKLEEAQEKELATKL 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +E ++ + ++ +L + ++ FFD V+V +D+ +R NRL+LL+ + + Sbjct: 626 DETAARFEELWENDEFSKLFAILGELRPYVDDFFDNVMVICEDKGLRMNRLNLLKALVDR 685 Query: 692 ILIVINVQKI 701 + + + + Sbjct: 686 LSRLADFGAL 695 >gi|238019251|ref|ZP_04599677.1| hypothetical protein VEIDISOL_01115 [Veillonella dispar ATCC 17748] gi|237863950|gb|EEP65240.1| hypothetical protein VEIDISOL_01115 [Veillonella dispar ATCC 17748] Length = 683 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 200/728 (27%), Positives = 335/728 (46%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADTSAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVSEMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVKSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDIAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQNGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--IDADVAL 410 KPL R L +VF +G ++ R+ LG+ + + D A+ Sbjct: 334 ----------KPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDAAV 381 Query: 411 V-DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESEEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 442 QTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPIF 501 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +L FF RLK DR++ H +I+ +L ++ L Sbjct: 502 KASMELLNVAADKQDELLGQVEEFFTLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + + + + R++ ++ E ++ L +AEK L+ S Sbjct: 562 VNALLA-NRIDENVELVQAYTRMYNLVKDLEYTG------VNSDLLKEDAEKALFEAASK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASLAAWEANDYAAVVAVPATLVPAINKFFEDVMVMDKDEAIKSNRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|294011764|ref|YP_003545224.1| glycyl-tRNA synthetase beta chain [Sphingobium japonicum UT26S] gi|292675094|dbj|BAI96612.1| glycyl-tRNA synthetase beta chain [Sphingobium japonicum UT26S] Length = 763 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 256/793 (32%), Positives = 375/793 (47%), Gaps = 127/793 (16%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DFLLE+ EEIPARMQ KA+EDL+ + L + G+ +++ + TP RL L + L Sbjct: 6 MTDFLLELRCEEIPARMQLKASEDLARLFTEELAKSGLKPESIDSFVTPRRLALIARNLP 65 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE GPR A +A++GFLR TGL D +D V+ A + KP R Sbjct: 66 LETAAVSEEHKGPRTSAPAQALEGFLRKTGLT--QDQLEDRDG----VWFATVNKPGRAS 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL VP I+ PWPKSMRW + W+RPL+ I+ IL E+++D+++ Sbjct: 120 AQVLAEAVPAVIRAFPWPKSMRWGKASQTTESLRWVRPLQGIVAIL-----GEELVDIEI 174 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T GHRFH P I + Y L V++ R++ I A A+A G Sbjct: 175 EGIKSGYATLGHRFHHPGEITIGGAHDYAEKLRACHVIVSHRERQSIIEAKAAEAAAAHG 234 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 ++EDK L+ E GL EW +G FD +L +P E+I+LT++ NQK FV R G LA Sbjct: 235 YTVIEDKGLVAENAGLTEWPVPLLGDFDPAFLEVPPEVIQLTLRINQKYFVLRDASGKLA 294 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI +NI+A DGGAAIV GN +V+AARL DA FW++D+ Sbjct: 295 PAFICTANIEAKDGGAAIVAGNRKVLAARLSDARFFWEQDRK------------------ 336 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI-----------AQLIDADV- 408 L+ +L+ + FH K+GT ++V R+ L + + Q + ++ Sbjct: 337 --TKLEDHAKKLER--ITFHEKLGTVADKVERVAKLARWLVEEGIVQSNKEGQQPETELF 392 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A L+KADL TE+V EFPELQG +G YA + + + DAI +H KP G + V Sbjct: 393 NAALSASRLAKADLVTEMVGEFPELQGVMGGYYARAEGLSGAVADAIRDHYKPIGQSDEV 452 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 PT ++ VSLADKLD ++ F+AI+EKP+GSKDP+ALRRA LGI+ +I +++I +P S+ Sbjct: 453 PTAPATVVVSLADKLDNILAFFAIDEKPTGSKDPFALRRAGLGILSLIGQSEIRLPFSKI 512 Query: 529 I----------------EDQNLILFFHDRLKLYLHDR----------------------- 549 ED F HD + +L R Sbjct: 513 GPQYLALLAKQIASRGLEDTGYSSFAHDVYQDWLAGRPLTRNEDGSISRMNDDGGSRHYS 572 Query: 550 -------DIRHDLIEAILRP---------------------------------ENDNLLT 569 D+ EA+++ D+L+ Sbjct: 573 QELAPLIRYAADVHEAVMKSAPDVLPFLADRLKVQQKEAGVRHDLIDAVFALGGEDDLVR 632 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 ++ +K L F ++ G L KR IL +K+ E + Y AE L A Sbjct: 633 LLARVKALQSFVATDDGTNLLAGYKRAANIL---KKEGVETAEATQLTYTPEPAEAALIA 689 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + ++ + + L ++ PI+ FF+ V VN D R RL+LL ++ Sbjct: 690 ALDAAEPRATAAVAAEDFEGAMAALATLRAPIDAFFESVTVNDADETKRSARLALLSRVR 749 Query: 690 NIILIVINVQKIV 702 + V + KI Sbjct: 750 KAVHAVADFSKIA 762 >gi|304439785|ref|ZP_07399683.1| glycyl-tRNA synthetase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371772|gb|EFM25380.1| glycyl-tRNA synthetase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 688 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 217/728 (29%), Positives = 364/728 (50%), Gaps = 72/728 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 ++LLEI EE+PAR A + L++ + Y+++R Y TP RL L++ G+ Sbjct: 2 NYLLEIGMEELPARYVDLALIQIRDKADKFLRDNLIDYKDIRTYATPRRLTLFIDGIEEF 61 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G K ++GFL+S L+ + D +IK D K + + K Sbjct: 62 QRDIDEEVKGPAKKIAFDEDGNPTKPLEGFLKSKNLK-LEDIEIK-DLKGTEYVYGQVHK 119 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 E++LK +P I+ + +PK+M+W + + RP++ ++ +L +E + Sbjct: 120 KGEKSEEILKVEIPSLIKGITFPKNMKWGGKN-----LKFARPIRWVVSMLDSE-----V 169 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 ++ + IP G++T GHRF I++ +D+Y + LEE V+LD + R I +A + Sbjct: 170 VEFPFEGIPVGSVTRGHRFLGSSHIEIDHVDNYEKLLEENYVILDQKKRLEIIKINAKKE 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A+G E+ EDKDLL+E+ + E+ G+ ++YL LP E+I ++ + + Sbjct: 230 AKALGGEIKEDKDLLDELTYINEYPTPITGNVKEEYLELPAEVITTPMRDHLRYIPVYNE 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + +GN +V+ ARLEDA F+ D Sbjct: 290 DGDLLPYFITVRNG-TDYKKEVVSKGNEKVLGARLEDAKFFYNEDIK------------- 335 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALVD 412 L+ L ++F K+GT ++ RI L ++I + + D + + Sbjct: 336 -------TKLEDLNENLK--GLMFQDKLGTMYDKSLRIDKLSREIGEKLEVADESLVDLK 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA LSKADL T++V EF ELQG IG Y+ LQ E AI E PR + +P Sbjct: 387 RAAELSKADLTTKMVTEFTELQGTIGSIYSKLQGEKPLVSQAIFEQYLPRFAGDELPETT 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 I ++LADK+DT++ +AI P+GS+DP+ALRR ++G+I I+ + D+ LS ++ Sbjct: 447 IGSILALADKIDTIVGLFAIGLIPTGSQDPFALRRLSIGVINILKDKNWDLSLSDIVDHA 506 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ +F R+K L D +IR+D+I+ ++ + + TI Sbjct: 507 LYTYVQENNLTFNYEEVKEKILDYFRARIKNILEDMNIRYDIIQGVIASDGTVIETIDKA 566 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 IK LNEFF + E + R+ + E+ E++ + +EK LY Sbjct: 567 IK-LNEFFKEDRTE-LTDALTRVHNLATKYEE------GEVAEERFEDPSEKELYNRFES 618 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ ++ K+Y + L+ + I+ FFD +V VDD VR+NRL+LL I +++ Sbjct: 619 IRPDVETLINDKKYEEALLALNPLVPFIDKFFDSCMVLVDDENVRNNRLALLHLIDSLVE 678 Query: 694 IVINVQKI 701 V+N++ I Sbjct: 679 RVVNIESI 686 >gi|237810904|ref|YP_002895355.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei MSHR346] gi|254181748|ref|ZP_04888345.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1655] gi|184212286|gb|EDU09329.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1655] gi|237504911|gb|ACQ97229.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei MSHR346] Length = 699 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 208/715 (29%), Positives = 343/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +PE+ + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E+ VL RR I A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|126439880|ref|YP_001057753.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 668] gi|167718173|ref|ZP_02401409.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei DM98] gi|167917629|ref|ZP_02504720.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei BCC215] gi|217419517|ref|ZP_03451023.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 576] gi|254187677|ref|ZP_04894189.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|126219373|gb|ABN82879.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 668] gi|157935357|gb|EDO91027.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|217396821|gb|EEC36837.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 576] Length = 699 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 209/715 (29%), Positives = 343/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +PE+ + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E+ VL RR I A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L ++D +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEAAEKALAEQLADVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|325143641|gb|EGC65960.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240013] Length = 686 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 212/707 (29%), Positives = 352/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 15 PPKALNNLGNHFAASVAEGLEKAQLIAGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 75 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 133 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 183 GNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTADP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 342 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 520 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 579 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 635 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 681 >gi|302383878|ref|YP_003819701.1| glycyl-tRNA synthetase subunit beta [Brevundimonas subvibrioides ATCC 15264] gi|302194506|gb|ADL02078.1| glycyl-tRNA synthetase, beta subunit [Brevundimonas subvibrioides ATCC 15264] Length = 729 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 257/767 (33%), Positives = 376/767 (49%), Gaps = 104/767 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP L+E++SEEIPARMQ AA DL + LK G+ + + + P RL L + GL Sbjct: 1 MPQLLIELFSEEIPARMQGGAARDLERMATERLKAAGLSWDALTTWAGPRRLTLVIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +P++ EE GPR A ++A++GFLR TGL D ++D V AV+ + R Sbjct: 61 AATPDRSEELKGPRANAPEQALEGFLRKTGLT--RDQLTERDG----VLFAVIEEAGRPT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 V+ + ++ PWPKSMRW + W+RPLK I+ + E ++ + Sbjct: 115 TTVIAETLDQIVRAFPWPKSMRWGSG-----TLRWVRPLKRIVALF-----DEAVVPFAI 164 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I G++T GHRF P V+ Y L++ VLLD R+ IL A A Sbjct: 165 DGIQSGDVTEGHRFMGAGQPFAVKDFADYRAKLDQHFVLLDAADRKLKILEAARAACHAR 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGV 298 GLELV+D LL+E+ GL EW +G D ++L LP E++RL++K +QK F R G Sbjct: 225 GLELVDDDGLLDEVAGLAEWPTPILGDMDPQFLALPPEVVRLSMKVHQKYFAVRDPATGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA FI+V+N++ASDGG A+ GNSRV++ARL DA FW D+ Sbjct: 285 LAPNFIVVANVEASDGGVALAAGNSRVLSARLNDARFFWDEDRK---------------- 328 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 D +L V FHAK+GT RV RI L ++IA L+ AD + A LS Sbjct: 329 ----TGFDAWNEKLK--GVTFHAKLGTLAGRVDRIAALAREIAPLVGADPDQAETAARLS 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA + + DA+ +H KP+GP ++VPT +++ V+ Sbjct: 383 KADLASAMVGEFPELQGIMGGYYARADH-GDAIADAVRDHYKPQGPADSVPTAPLTVAVA 441 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--EDQNLIL 536 LADKLDTL+ F+AI+EKP+GSKDP+ALRRA LG+IR+IL+N + L L Sbjct: 442 LADKLDTLVGFFAIDEKPTGSKDPFALRRAALGVIRLILDNGQRVALMPVFGSAFAELST 501 Query: 537 FFHDRLKLYLHDRDI-------------------RHDL----------------IEAILR 561 R L D +I D+ ++A+L Sbjct: 502 KAWGRPIARLADLEIAEEDGELTTAQTAELVQLRAADVQGRDPVGHTVEDDVANVDALLA 561 Query: 562 -------------PENDNLLTIV------------DLIKHLNEFFSSAKGEKFLLSAKRI 596 + +L+ V ++ L+ F ++ G L KR Sbjct: 562 FFADRLKVLLRDQGKRHDLVDAVFALGDDDLVRIVRRVEALDAFLATDDGANLLAGYKRA 621 Query: 597 FQILAIEEKKNREISLEISPQYLLL-EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 IL E KK + ++ EAE L T + +++ + + L Sbjct: 622 SNILKAEAKKGEVPTGMVATGLANQPEAETTLAFATDVARTAVDTALETEDFAAAMTALS 681 Query: 656 SICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + P++ FF V+VN D RDNRL LL +++++ V + ++ Sbjct: 682 RLRAPVDAFFTDVMVNSDVPAERDNRLKLLGQVRDVMGRVADFGQVA 728 >gi|289209733|ref|YP_003461799.1| glycyl-tRNA synthetase subunit beta [Thioalkalivibrio sp. K90mix] gi|288945364|gb|ADC73063.1| glycyl-tRNA synthetase, beta subunit [Thioalkalivibrio sp. K90mix] Length = 693 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 202/698 (28%), Positives = 349/698 (50%), Gaps = 62/698 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+E+ +EE+P + + L+ L L+E G+ + TP RL + + Sbjct: 6 ELLIELGTEELPPTALARLRDALAEGLTTRLREAGLEPGEPETFATPRRLAVLFPDIPGQ 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P++++ER GP V G KA+ GF RS G++ ++ KG+ + + Sbjct: 66 QPDQLQERRGPAVAAAFDDAGEPTKAVLGFARSCGVEVERLE--RETTDKGEYLVFRQLQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R + ++L ++ A++ +P PK MRW + S ++RP ++ + ++ Sbjct: 124 PGRPLGELLPDMLAAALEALPTPKRMRWGS-----SRTEFVRPAHWLVVL-----HGTEV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHR 234 +++ + E G T+GHRFH P ++++ + Y L V E RR IL H Sbjct: 174 LEMTVLEQTAGRATHGHRFHQPGALELKRGNDYAERLRSPGFVEPSFEARRERILEQVHE 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A A+G + D DLL E+ LVEW G FD ++L +P+E + T++ NQK F Sbjct: 234 QAQALGGRALVDADLLAEVTALVEWPVALTGGFDPRFLEVPQEALISTMQDNQKYFPVVD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + FI++SNI++ D A + GN RV+ R DA FW++D+ Sbjct: 294 EAGRMQPHFIVISNIESRDPHA-VRDGNERVLRPRFADAEFFWQQDRK------------ 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 K L++R+ LD VVF ++GT ++ R+ L +++A L+ D L RA Sbjct: 341 --------KRLEERLDALD--SVVFEKRLGTLRDKSVRLEALMQRLAVLMGLDANLAARA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL T++V EF ELQG +G+ YA+ E+ + AIE+H PR +P ++ Sbjct: 391 ARLAKCDLVTQMVFEFTELQGTMGRYYALHDREDETVAAAIEQHYWPRQSGSELPDAPLA 450 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 ++LAD+LDTL+ +AI ++P+G+KDP+ALRRA LG++RI++E ++ + L+ ++ Sbjct: 451 QALALADRLDTLVGIFAIGKQPTGTKDPFALRRAALGLVRILVERELPLALTPLLQAAAE 510 Query: 535 ----------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + +RL+ YL ++ H+ IEA+ D L V ++ ++ Sbjct: 511 PIRERVPEADQAVEPVRDYILERLRGYLLEQGQAHETIEAVAAVAPDTPLDFVHRVRAVS 570 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + E + KRI +L K E ++ P+ L L+ E++LY + + Sbjct: 571 LFRERPEAEALAAANKRIHNLLR---KAGEEAEADLDPEALALDEERQLYQGLQAVRPGV 627 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 ++++ Y L + + ++ FFDQV+V +D Sbjct: 628 EQAVADGDYLHALGELAGLRDRVDTFFDQVMVMAEDAA 665 >gi|292670216|ref|ZP_06603642.1| glycyl-tRNA synthetase [Selenomonas noxia ATCC 43541] gi|292648168|gb|EFF66140.1| glycyl-tRNA synthetase [Selenomonas noxia ATCC 43541] Length = 683 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 206/736 (27%), Positives = 334/736 (45%), Gaps = 89/736 (12%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EEIPA + DL + L+++ + Y+N+R TP R L + GL Sbjct: 1 MSKDLLLEIGTEEIPAHVMPHLLSDLKRLAGEQLRDQRLSYENLRTIGTPRRAALIVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G KA +GF R G+ + Q + G VY A Sbjct: 61 AERQEDVSTETRGPSVAIAFDAAGNPTKAGEGFARGQGIDPSALIQ-----RDGYVY-AS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L ++P I+ +P P SMRW F +IRP++ ++ + E Sbjct: 115 VHEKGAETARLLTELLPELIRSIPLPNSMRWGDLD-----FRFIRPIRWLVALYGTET-- 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + L + GN++ GHR AP + S Y E A +++DPE RR I Sbjct: 168 ---VPFMLANVTSGNMSRGHRTLAPADFIIPSPADYEAACERAHIIVDPERRRAMICEQI 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A A G DLLEE++ LVE+ G+F+++YL LP E + ++ +Q+ F Sbjct: 225 AETAKACGGTAEITPDLLEEVLYLVEYPTALSGAFEERYLALPAEAVITPMRDHQRYFPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + +G L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 285 KAADGSLLPVFITVRNGG-KEHLDVVAHGNERVLRARLADAQFFFDEDRR---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA--- 409 K L + +L VVF +G+ E+ R+ L I + I D A Sbjct: 334 ----------KSLAEHREKLKT--VVFQQGLGSMYEKTERLMGLVTAIVEEIAPDDAVYE 381 Query: 410 ----LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 RA LSKADL T +V EF ELQG +G+EYA+L E + AI+E PR Sbjct: 382 VMSSDARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGEKPAVARAIDEQYMPRFAG 441 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +P + +S+ADK+D ++ ++ + P+GS+DP+ALRR LG++ +++E + + L Sbjct: 442 DELPQTPLGFALSVADKIDNIVGTFSRGKIPTGSQDPFALRRQALGLVLMLIEQESGLLL 501 Query: 526 SQFIE----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 S ++ ++ F RLK L +R +R+D+ EA+L + D + Sbjct: 502 SDLVDEACDLYALDEDKREKMQADVADFIRLRLKNVLTERGVRYDVQEAVLA-DVDFVAN 560 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + ++ + + S R+ I + E+ + E L + Sbjct: 561 VPVRAAYVERLLKENGADALVQSFVRVGNIARMAER------TTLDTDLFQAAEEGALLS 614 Query: 630 VISDFGTHI---QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 + ++++ +R S+ + I+ FFD V+V D ++ NRL+LL+ Sbjct: 615 AYENAAAARAGGEDTLAAER---------SLAQAIDAFFDAVMVMDKDARIKINRLTLLK 665 Query: 687 YIKNIILIVINVQKIV 702 I + +L + KIV Sbjct: 666 TIDDYLLETADYSKIV 681 >gi|126451572|ref|YP_001064998.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 1106a] gi|242317286|ref|ZP_04816302.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106b] gi|126225214|gb|ABN88754.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106a] gi|242140525|gb|EES26927.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106b] Length = 699 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 208/715 (29%), Positives = 342/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +PE+ + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E+ VL RR I A+A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDR 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLGDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|221065032|ref|ZP_03541137.1| glycyl-tRNA synthetase, beta subunit [Comamonas testosteroni KF-1] gi|220710055|gb|EED65423.1| glycyl-tRNA synthetase, beta subunit [Comamonas testosteroni KF-1] Length = 704 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 208/731 (28%), Positives = 359/731 (49%), Gaps = 61/731 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKG 58 + L+E++ EE+P + K + + ++ LK +G++ + Y +P RL +++ Sbjct: 4 SNLLVELFVEELPPKALQKLGDAFAAVIFEQLKAQGLLASTESRLTAYASPRRLAVHITE 63 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYL 110 + P + +K + ++L P G A+ L + G + +K+ K + Sbjct: 64 VLPQAEDKAVSQKLMPVSVALDAEGKPTAALLKKLAALGADESAVAALKRQGEGKAEALF 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 L+ D ++ + A+ K+P PK MR+ ++ ++RP ++ + + Sbjct: 124 YESTAKGVLLTDGVQKALDEALAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVVLHGTQV 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRRNAI 228 +I + + G T+GHRF A P+ +Q+ D Y L EE V+ RR I Sbjct: 183 ----LIGVKALGLTAGAATHGHRFEAAVDPVVIQNADSYAEQLREEGAVIASFTERRADI 238 Query: 229 LNDAHRLASAVGLELVE--DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 A +G ++ D LL+E+ LVE V + F+K++L +P+E + LT+K N Sbjct: 239 ARQLQAAAERIGGGVIPIDDPALLDEVTALVERPNVLVCEFEKEFLAVPQECLILTMKAN 298 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L + F++VSNIQ D +A+V GN RVV RL DA F+ +D+ Sbjct: 299 QKYFPLLDANGKLTHQFLIVSNIQPQDA-SAVVGGNERVVRPRLADAKFFFDQDRK---- 353 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L R+ +LD VV+H K+GTQGER++R+R + K IAQ + Sbjct: 354 ----------------KTLASRVEQLD--KVVYHNKLGTQGERIARVRAIAKSIAQQLGN 395 Query: 407 DV--ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 L D+A +L+K DL T++V EFPELQG +G+ YA +++ DAIE+H KPR Sbjct: 396 SELGRLADQAAMLAKTDLVTDMVGEFPELQGIMGRYYAQNDGLDVAVADAIEDHYKPRFA 455 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK---- 520 + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E Sbjct: 456 GDELPRGDVGVIVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKDLELD 515 Query: 521 --------IDIPLSQFIEDQ-NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + + L+ F +DRL ++ +EA+L + L + Sbjct: 516 LETLLVSTLPAFGDKIQDATPQLVEFIYDRLANMFREQGYSAQEVEAVLALQPQRLSDVQ 575 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL +K ++ +++ LL +AEK LYAV+ Sbjct: 576 KRLEAVRAFATLPEAPALAAANKRVGNIL---KKAEADVQPQVNDALLLEQAEKDLYAVL 632 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q+ Y L ++ ++ FF+QV+VN +D ++ NRL LL + Sbjct: 633 QQVAPKAQQQFAAGDYTASLQTLAALRASVDAFFEQVMVNAEDPALKANRLGLLASLHIA 692 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 693 MNQVADLARLA 703 >gi|300310051|ref|YP_003774143.1| glycyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] gi|300072836|gb|ADJ62235.1| glycyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] Length = 706 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 194/732 (26%), Positives = 349/732 (47%), Gaps = 62/732 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWT--PHRLFLYLKGLS 60 L+E+ +EE+P + K + + + L+ G + + P RL + + + Sbjct: 4 TLLVELVTEELPPKALAKLGDAFATGIFNGLQSRGYLDADATATAYATPRRLAVSITQVC 63 Query: 61 PHSPEKIE-ERLGPRVGAGK----------KAIDGFLRSTGLQTISDCQIKK-DPKKGDV 108 SP+K E++ P A K + STG I+ Q+++ K + Sbjct: 64 AASPDKSIREKVLPVSVALDAEGRPSAPLVKKLAALAASTGATVITPDQLERAQDGKAES 123 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWST--THSPISAFSWIRPLKSILCIL 166 + + L+ + ++ K+P PK M + + ++RP ++ +L Sbjct: 124 FFYTYTAKGSALAVGLQAALDESLSKLPIPKVMSYQRQFGRAAGETVHFVRPAHYLVALL 183 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRR 225 ++ ++ + G T GHRF + +++ + D Y+ L + V+ RR Sbjct: 184 -----GNDVVPINTLGLDAGRTTLGHRFLSAGALQIAAPDAYVESLAQQGNVIASFTERR 238 Query: 226 NAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 I A LA A +++ + LL+E+ LVEW V+ F+ ++L +P+E + LT++T Sbjct: 239 EKIR--AALLAKAGADQVLMPEALLDEVTALVEWPVVYECKFEDEFLAVPQECLILTMQT 296 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 NQK F G L + F++VSN++ + I+ GN RVV RL DA F+++D+ Sbjct: 297 NQKYFALTDANGRLRSRFLIVSNLETAHP-EHIIGGNERVVRPRLSDAKFFFEQDKK--- 352 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 K L +R+ +L +VV+H K+G Q +R R++ L KIA L+ Sbjct: 353 -----------------KTLAERVPQL--ANVVYHNKLGNQLQRTERVQALAGKIASLLG 393 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 DV L +R +L+KADL T++V EFPELQG +G YA E A EH +PR Sbjct: 394 GDVKLAERGALLAKADLLTDMVGEFPELQGIMGTYYARHDGEADEVALAASEHYQPRFAG 453 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +PT V+LADKL+TL+ W I +P+G KDP+ALRR LG++R+++E ++ + L Sbjct: 454 DALPTTATGTAVALADKLETLVGIWGIGLQPTGDKDPFALRRHALGVLRMLVEKRLPLSL 513 Query: 526 SQFIEDQNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + ++ + F +DRL+ L +R + +EA++ + + L + Sbjct: 514 TALLDAATGLFAGNANFKDPRADVQAFIYDRLRGLLRERGFAQNEVEAVVAQQPEVLDNV 573 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 V+ ++ + F + + E + KRI IL E + + L AE+ L+A Sbjct: 574 VERLQAVQAFAALPEAEALAAANKRITNILKKIEGVAIDAHGAVQESLLQEAAEQGLFAA 633 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++ + + L + + ++ FF+ V+VN +D ++R NR +LL + Sbjct: 634 MQTTRPQVEAAYAKGDFAGALKALAQLRQNVDAFFNDVMVNAEDEQLRKNRQALLAALHG 693 Query: 691 IILIVINVQKIV 702 ++ V ++ K+ Sbjct: 694 MLNQVADISKLA 705 >gi|76811609|ref|YP_332294.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 1710b] gi|134279466|ref|ZP_01766178.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 305] gi|167901385|ref|ZP_02488590.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei NCTC 13177] gi|254196673|ref|ZP_04903097.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei S13] gi|254261736|ref|ZP_04952790.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710a] gi|76581062|gb|ABA50537.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710b] gi|134248666|gb|EBA48748.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 305] gi|169653416|gb|EDS86109.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei S13] gi|254220425|gb|EET09809.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710a] Length = 699 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 208/715 (29%), Positives = 342/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +PE+ + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E+ VL RR I A+A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDR 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|53718310|ref|YP_107296.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei K96243] gi|53725037|ref|YP_102052.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei ATCC 23344] gi|67641460|ref|ZP_00440238.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei GB8 horse 4] gi|121600887|ref|YP_994024.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei SAVP1] gi|124386095|ref|YP_001028312.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei NCTC 10229] gi|126448019|ref|YP_001081956.1| glycyl-tRNA synthetase subunit beta [Burkholderia mallei NCTC 10247] gi|167002699|ref|ZP_02268489.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei PRL-20] gi|167737204|ref|ZP_02409978.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 14] gi|167814335|ref|ZP_02446015.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 91] gi|167822812|ref|ZP_02454283.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 9] gi|167844386|ref|ZP_02469894.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei B7210] gi|167909614|ref|ZP_02496705.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 112] gi|226196695|ref|ZP_03792275.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|254176698|ref|ZP_04883355.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 10399] gi|254203737|ref|ZP_04910097.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei FMH] gi|254208712|ref|ZP_04915060.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei JHU] gi|254296211|ref|ZP_04963668.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 406e] gi|254360235|ref|ZP_04976505.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei 2002721280] gi|52208724|emb|CAH34660.1| putative glycyl-tRNA synthetase beta chain [Burkholderia pseudomallei K96243] gi|52428460|gb|AAU49053.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 23344] gi|121229697|gb|ABM52215.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei SAVP1] gi|124294115|gb|ABN03384.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei NCTC 10229] gi|126240889|gb|ABO03982.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei NCTC 10247] gi|147745249|gb|EDK52329.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei FMH] gi|147750588|gb|EDK57657.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei JHU] gi|148029475|gb|EDK87380.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei 2002721280] gi|157805848|gb|EDO83018.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 406e] gi|160697739|gb|EDP87709.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 10399] gi|225931226|gb|EEH27233.1| glycyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|238522400|gb|EEP85844.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei GB8 horse 4] gi|243061638|gb|EES43824.1| glycyl-tRNA synthetase, beta subunit [Burkholderia mallei PRL-20] Length = 699 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 209/715 (29%), Positives = 342/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +PE+ + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E+ VL RR I A+A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDR 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L ++D +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEAAEKALAEQLADVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|253999833|ref|YP_003051896.1| glycyl-tRNA synthetase subunit beta [Methylovorus sp. SIP3-4] gi|253986512|gb|ACT51369.1| glycyl-tRNA synthetase, beta subunit [Methylovorus sp. SIP3-4] Length = 701 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 204/729 (27%), Positives = 349/729 (47%), Gaps = 61/729 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + +K E S L+ +LK +G+ + + Y +P RL ++ + Sbjct: 4 NLLVELFVEELPPKALNKLGEAFSSTLLEVLKSQGLTSETSQVTAYASPRRLAAHISDVV 63 Query: 61 PHSPEKIEERL-GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 + +K P G A+ L + G + Q+K++ K D+ Sbjct: 64 AKAADKSLSHKLMPATVGLDANGKATPALLKKLTALGADESAVSQLKREHDGKADILFLE 123 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + L+ + A+ K+P PK M + ++ +++RP ++ + Sbjct: 124 GTAAGATLSEGLQKALDEALAKLPIPKVMTYQLQDG-WTSVNFVRPAHGLVAL-----HG 177 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 ++I + + GN T GHRF A P+ ++ DHY L+ E V+ RR I+ Sbjct: 178 NELIPVSALGLQSGNTTQGHRFEAKVSPVTLRHADHYAEQLQTEGAVIASFAERRAEIVR 237 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A+ G L ++D+ LL+E+ LVE V +G F+ ++L +P+E + LT+K NQK Sbjct: 238 QLTAAAAKAGPQLTPIQDEALLDEVTALVERPNVLLGQFEDEFLQVPQECLILTMKANQK 297 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + +G L+N F++VSNI D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 YFPLLSADGQLSNKFLIVSNISPDDA-SAVIGGNERVVRPRLADAKFFFDQDRK------ 350 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 K L+ R+A LD VV+H K+G+QG+R +R+ + I Q + D Sbjct: 351 --------------KTLESRLASLD--KVVYHNKLGSQGQRTTRVASIASAIGQQLGGDA 394 Query: 409 ALVDRAIVLSKA--DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A A DL T++V EFPELQG +G+ YA + + AIE+H KPR + Sbjct: 395 LASKAAQAARLAKADLVTDMVGEFPELQGIMGRYYAQHEGLDNDVAYAIEDHYKPRFAGD 454 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID---- 522 +P N++ + V+LADKL+TL + I + PSG KDP+ALRR LG++R+++EN + Sbjct: 455 ELPRNQVGVVVALADKLETLCGMFGIGQIPSGDKDPFALRRHALGVVRLLIENSLPLTLD 514 Query: 523 ---------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 L F +DRL L ++ ++A+L E L I Sbjct: 515 TLLNTTFGCFAADVENASTALRSFIYDRLSGSLREQGYSAQEVDAVLALEPQQLADIAKR 574 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + F + + E + KR+ IL +K ++ I+ L+ AE+ L ++ Sbjct: 575 LEAVKAFAALPEAESLAAANKRVGNIL---KKAEGDVQASINQALLVEPAEQALAQALAS 631 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y L ++ P++ FFD V+VN +D ++ NRL LL + + Sbjct: 632 VTPQADAAFAAGDYRSSLQALAALRTPVDAFFDGVMVNAEDPALKANRLGLLASLHQAMN 691 Query: 694 IVINVQKIV 702 V ++ ++ Sbjct: 692 RVADLSRLA 700 >gi|327462421|gb|EGF08746.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1057] Length = 679 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 212/725 (29%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAQGFVRGKGLTVGD---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ +++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLIVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGKET-EIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIGT E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGTLAEHMERTGKIATFLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRGIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKV-- 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 617 ELTPDLAAN-----LDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|254450582|ref|ZP_05064019.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 238] gi|198264988|gb|EDY89258.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 238] Length = 741 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 263/767 (34%), Positives = 392/767 (51%), Gaps = 94/767 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAA DL ++ L + G+ Y + TP RL L ++GLS Sbjct: 1 MPDLLIELFSEEIPARMQAKAAADLQKLVADGLVDAGLTYAGAGAFCTPRRLALSIEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 SP+ EER GP+VGA AIDGF R G+ D +D KG+VY AV++KP R Sbjct: 61 AESPDTREERKGPKVGAPDGAIDGFCRGAGVS--RDALEARDTGKGEVYFAVIQKPGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ AI+ PWPKSMRW T + W+RPL SI+CIL ++ +++ + + Sbjct: 119 ADIIAEVLEGAIRNFPWPKSMRWGTG-----SLKWVRPLHSIVCIL-TDEGGAEVVAMSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP V S D Y L+ A V+L + R + I ++A A A G Sbjct: 173 DGIAAGNTTRGHRFMAPDEFSVTSFDDYEAKLKRAKVILRSDERADMIWSEASNQAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELV+DK LL E+ GLVEW V MG+ +L LP E++ ++K +QK F R + G + Sbjct: 233 LELVDDKGLLAEVAGLVEWPVVLMGTIADDFLSLPPEVLTASMKEHQKFFSVREKSGQIV 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +D G I+ GN +V+ ARL DA FW+ D +A Sbjct: 293 -RFVTVANRETADRGKTILAGNQKVLFARLSDAKFFWENDLRVAKAGGQAWLAA------ 345 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + +V FH K+GT E V R+ L +++A L+ AD + A +KA Sbjct: 346 -------------LGNVTFHNKLGTVAELVDRMAALSREVAPLVGADPDEAEAAARFAKA 392 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFP+LQG +G+ YA + + A +EH P GP ++VPT +S+ V+LA Sbjct: 393 DLSSEMVYEFPDLQGLMGRYYAAEAGLSDAVALAAQEHYSPLGPSDDVPTEPVSVAVALA 452 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF--- 537 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IR++LEN++++ L + + + + Sbjct: 453 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENELELNLKKMLTKEIAFRYGFS 512 Query: 538 --------FHDRLKLY------LHDRDIR-----------HDLIE----AILRPENDNLL 568 + D L+ L DIR +IE A + + L Sbjct: 513 VFGPLSKPYLDALESASAKDEDLLAEDIRNAYEEILPDLEAHVIEESATATPKAAKNLLS 572 Query: 569 TIVDLIK-----------HLNEFFSSAKGEKFLLSAKR---------------------- 595 D +K ++ + + LL R Sbjct: 573 FFHDRLKVYLKDEGISHDVIDASLAMPGNDDLLLLVNRAKALAAFLKTDDGVNLIQGFKR 632 Query: 596 IFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 IL+ E K+ E S ++ + EK L+ + I +M + + + Sbjct: 633 ANNILSQAEDKDGVEYSFGAEAKFADADEEKALFTALDAADAKIAPAMAAEDFGAAMSAM 692 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FF+ V +N D +R NRL+LL I+ I L V +++K+ Sbjct: 693 ADLRAPIDAFFNTVQINADSAVLRRNRLNLLHRIRTICLSVADLRKL 739 >gi|296161021|ref|ZP_06843832.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. Ch1-1] gi|295888720|gb|EFG68527.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. Ch1-1] Length = 699 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 210/716 (29%), Positives = 345/716 (48%), Gaps = 63/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L ++ + Y TP RL + +K + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLVEGELSFERYATPRRLAVTIKNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P + G + L + G +++D + +D K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVNDLERAQD-GKAEAFFLRYAAPGATLAE 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L++ + + K+P PK M + + ++RP + + E+I+ + Sbjct: 138 GLQSALDETLAKLPIPKVMTYQRPDG--TNVQFVRPAHRLTAL-----HGEQIVPVSALG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 I + T GHRF + +++Q D Y L + V+ + R+ I H LA A G Sbjct: 191 IDADDTTLGHRFLSEGFVQIQHADSYAETLLHKGRVVANFSDRKETIRT--HLLAQANGD 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 QVVMPESLLDEVTSLVEWPVVYACRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ S G IV+GN RVV RL DA F+++D+ Sbjct: 309 RFLIVSNIETSTPGD-IVEGNERVVRPRLADAKFFFEQDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 K L R+ L +VV+H K+G+ +RV R+ L IA+LI ADVAL RA L+KAD Sbjct: 349 -KTLADRVPLL--ANVVYHNKLGSALQRVERVEALAGAIAELIGADVALAKRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +PT V+LAD Sbjct: 406 LITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPTTTTGTVVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------- 528 KL+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + Sbjct: 466 KLETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPVDFVELLRTAYAQFAAVPN 525 Query: 529 --IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Q + F DRL+ L +R I+A+L L IV + + EF S A+ Sbjct: 526 VVDSTQAIYEFSMDRLRGLLRERGYAPGEIDAVLALNPTRLDDIVARLDAVREFASLAEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KRI IL +K + + L+ AEK L+A + +Q + + Sbjct: 586 ASLAAANKRISNIL---KKSEGAATGGVQVALLVEAAEKALHAQLEQVAPRVQSQLAARD 642 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 643 YTGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRLA 698 >gi|313892678|ref|ZP_07826261.1| glycine--tRNA ligase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313442769|gb|EFR61178.1| glycine--tRNA ligase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 683 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 200/728 (27%), Positives = 335/728 (46%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAGTKLNDAHLPFESIETYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADASAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVSEMLPQLITGLNFPKSMHWGDLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVQSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDMAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VGQDGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--IDADVAL 410 KPL R L +VF +G ++ R+ LG+ + + D A+ Sbjct: 334 ----------KPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDAAV 381 Query: 411 V-DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 442 QTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPIF 501 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +L FF RLK DR++ H +I+ +L ++ L Sbjct: 502 KASMELLNVDADKQEELLNQVEEFFTLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + + + + R++ ++ E ++ L +AEK L+ S Sbjct: 562 VNSLLA-NRIDENVELVQAYTRMYNLVKDVEYTG------VNSDLLKEDAEKALFEAASK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + Y + + + I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASLAAWEAGDYAAVVAVPAILVPTINQFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|254672590|emb|CBA06277.1| glycine tRNA synthetase beta subunit [Neisseria meningitidis alpha275] Length = 687 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 213/707 (30%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLVVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNASVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEQTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|324992006|gb|EGC23928.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK405] Length = 679 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 212/725 (29%), Positives = 346/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E++L + V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEILPS-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGKET-EIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRGIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKV-- 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 617 ELTPDLAAN-----LDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|253997240|ref|YP_003049304.1| glycyl-tRNA synthetase subunit beta [Methylotenera mobilis JLW8] gi|253983919|gb|ACT48777.1| glycyl-tRNA synthetase, beta subunit [Methylotenera mobilis JLW8] Length = 703 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 213/734 (29%), Positives = 356/734 (48%), Gaps = 64/734 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYL 56 M + L+E++ EE+P + K + S L LK +G+ N + + TP RL ++ Sbjct: 1 MSQQNLLVELFVEELPPKALKKLGDAFSSTLFETLKLQGLSADNSVVTSFATPRRLAAHI 60 Query: 57 KGLSPHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDV 108 ++ + +K ++L P G A+ L GL + Q+ K K + Sbjct: 61 TAIAAQAKDKQISQKLMPVSVGLDANGNATPALIKRLNGMGLDESAVSQLTKQMDGKNEA 120 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 + + +++D L+ + AIQK+P PK M + S+ +++RP ++ + + Sbjct: 121 LFLEVTQKGAVLKDGLQKAIEEAIQKLPIPKVMTYQLADG-WSSVNFVRPAHGLIALHGS 179 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLE-EAMVLLDPECRRN 226 + I+ + GN T GHRF A + +++ D Y LE E V+ RR Sbjct: 180 D-----IVATSALGLSAGNQTQGHRFEAKSATVVIKNADSYAEQLETEGAVIASFAERRA 234 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I+ A+ GL+ ++D LL+E+ LVE V +G F+ ++L +P+E + LT+K N Sbjct: 235 EIVRQLTAAAAKEGLKPIDDDALLDEVTALVERPNVVLGQFEAEFLEVPQECLILTMKAN 294 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F L N F++VSNI +D +A++ GN RVV RL DA F+ +D+ Sbjct: 295 QKYFPLLDSNNKLTNKFLIVSNICPADP-SAVIGGNERVVRPRLADAKFFFDQDRK---- 349 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L+ R + L+ VV+H K+G+QG+R R+ + I + + Sbjct: 350 ----------------KTLESRTSSLE--KVVYHNKLGSQGQRSQRVVAIANAIGKQLGG 391 Query: 407 DVALVDRAIVL--SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 A+ SK DL T++V EFPELQG +G+ YA + + AIE+H KPR Sbjct: 392 AELAAKAALAAQLSKTDLITDMVGEFPELQGIMGRYYAQHEGLDNDVAFAIEDHYKPRFA 451 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +++P N++ ITV+LADKL+TL+ ++I EKP+G KDP+ALRR LGIIR+++E+K+ + Sbjct: 452 GDDLPRNQVGITVALADKLETLVGLFSIGEKPTGDKDPFALRRQALGIIRMLIESKLPLA 511 Query: 525 LSQFIED----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 Q I D Q + F DRL + L + ++A+L + L Sbjct: 512 FEQLIHDVLAAFEHDAANTAATVQAIKEFCFDRLSVNLRENGATAQEVDAVLSLDPALLS 571 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + F A+ + KR+ IL +K EI +++ L AE L Sbjct: 572 EVPQRLAAVRTFAELAEAPALAAANKRVSNIL---KKVEDEIQAQVNVSLLQEAAEVALN 628 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + ++ Y L ++ P++ FFD V+VN +D ++ NRL LL + Sbjct: 629 NALIAVKPEADKQFENGDYTSSLKALAALKAPVDDFFDNVMVNAEDAALKANRLGLLATL 688 Query: 689 KNIILIVINVQKIV 702 + V ++ K+ Sbjct: 689 HQTMNRVADLSKLA 702 >gi|258647017|ref|ZP_05734486.1| glycyl-tRNA synthetase, beta subunit [Dialister invisus DSM 15470] gi|260404458|gb|EEW98005.1| glycyl-tRNA synthetase, beta subunit [Dialister invisus DSM 15470] Length = 683 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 200/730 (27%), Positives = 344/730 (47%), Gaps = 75/730 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EE+PA M E + + L E + ++ + Y TP RL + + Sbjct: 1 MSKNLLLEIGTEEMPANMMSGIVEQMHALAGAKLNEARIAFEKVDVYATPRRLAVIVTAA 60 Query: 60 SPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P++ ++ GP + A KA +GF R G+ K+G+ A Sbjct: 61 ADAQPDEEVKKRGPSIRAAYDENGNMTKAAEGFARGQGISAADLI------KEGEYTWAQ 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +++E++L + I + + +SMRW + +IRP++ I+ + A Sbjct: 115 VVNKGKMVEEILPALFTSLITGLNFTRSMRWGDEEA-----RFIRPVRWIVAL-----AG 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E ++ ++ + G ++ GHRF ++++S + Y + +A V+ D + RR I Sbjct: 165 EAVVPMEFAHVRSGRMSRGHRFLCKEEVEIKSPETYKETMRKAFVIADQDERRALITAGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A +G ++ + DLLEEI LVE+ G D+++L LP + ++ +Q+ + Sbjct: 225 QKTAKELGGQVWHNADLLEEINYLVEYPTPLYGRIDEEFLDLPVPAVVTPMRDHQRYYPV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R +G L F+ V N + GN RV+ ARL+DA F+ D+ Sbjct: 285 RKEDGSLMPYFLTVRNGGDR-AIRNVQIGNERVLRARLDDAKFFFDGDRR---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVA 409 K L+ L ++ + +GT ++ R+ L + I + D + A Sbjct: 334 ----------KSLEGHREALSRIN--YQEGMGTMLDKSDRLVKLVEAIGEDWNFTDTEKA 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V RA LSK+DL T +V EF ELQG++GKEYA+L E AI E PR + +P Sbjct: 382 DVRRAAYLSKSDLATGMVTEFTELQGEMGKEYALLDGEKPKVAAAIFEQYMPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +SL+DKLD L + P+GS+DP+ALRR T+G + I+ + +I + + + Sbjct: 442 KSSIGRALSLSDKLDNLAATFLRGLIPTGSQDPFALRRQTIGAVHILTDGEIHWDVRKGV 501 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +L FF R+K L D + +D+++A+L D++ I Sbjct: 502 KMALALLPGTQEEKDTAADKVEDFFRQRIKAILLDEGVDYDIVDAVLTGAVDDVYAIF-- 559 Query: 574 IKHLNEFFSSAKGE-KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 +K + S KGE + + R+ I + ++EI P+ L EAEK LYA + Sbjct: 560 LKAHSMMDSHVKGELEMRQAVTRLVNITK------GKTAVEIRPELLTEEAEKNLYAALE 613 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 G + + + Y L ++ PI F D V+V V++ VR+NR+SLL + ++ Sbjct: 614 KAGEEVTSAYNAYDYGSALPALKTLTVPINQFLDSVMVMVEEEAVRNNRISLLINVLDVY 673 Query: 693 LIVINVQKIV 702 + K+V Sbjct: 674 RRWGDFSKLV 683 >gi|308390028|gb|ADO32348.1| putative glycyl-tRNA synthetase beta subunit [Neisseria meningitidis alpha710] gi|325201431|gb|ADY96885.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240149] Length = 687 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 210/707 (29%), Positives = 351/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTADP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|297516327|ref|ZP_06934713.1| glycyl-tRNA synthetase subunit beta [Escherichia coli OP50] Length = 579 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 180/612 (29%), Positives = 289/612 (47%), Gaps = 52/612 (8%) Query: 104 KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSIL 163 KG+ L E +L +V ++ K+P PK MRW + ++RP+ ++ Sbjct: 1 DKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASD-----VHFVRPVHTVT 55 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPE 222 +L +K+I + I + GHRF + + D Y L E V+ D E Sbjct: 56 LLL-----GDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYE 110 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 R+ I DA A +G + LLEE+ LVEW V F++K+L +P E + T Sbjct: 111 ERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYT 170 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 +K +QK F +G L FI V+NI++ D I+ GN +VV RL DA F+ D+ Sbjct: 171 MKGDQKYFPVYANDGKLLPNFIFVANIESKDP-QQIISGNEKVVRPRLADAEFFFNTDRK 229 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 K L+ + RL V+F ++GT ++ RI+ L IA+ Sbjct: 230 --------------------KRLEDNLPRLQT--VLFQQQLGTLRDKTDRIQALAGWIAE 267 Query: 403 LIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 I ADV RA +LSK DL T +V EF + QG +G YA E A+ E +PR Sbjct: 268 QIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPR 327 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 +++P+N ++ +++ADK+DTL + I + P G KDP+ALRRA LG++RII+E ++ Sbjct: 328 FAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLN 387 Query: 523 IPLSQFIEDQ---------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + L E+ ++I F R + + D D I+A+L Sbjct: 388 LDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRP 447 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 +K ++ F + + KR+ ILA K + +S ++ L E +L Sbjct: 448 ADFDARMKAVSHFRTLDAAAALAAANKRVSNILA---KSDEVLSDRVNASTLKEPEEIKL 504 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + ++ RY L + EP++ FFD+V+V VDD+E+R NRL++L+ Sbjct: 505 AMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEK 564 Query: 688 IKNIILIVINVQ 699 ++ + L V ++ Sbjct: 565 LRELFLRVADIS 576 >gi|254670880|emb|CBA07393.1| glycine tRNA synthetase beta subunit [Neisseria meningitidis alpha153] Length = 687 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 211/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + + V+ R+ AI A ++ + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARSLNAAVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|206889181|ref|YP_002249886.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|238064856|sp|B5YJ12|SYGB_THEYD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|206741119|gb|ACI20176.1| glycyl-tRNA synthetase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 679 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 214/720 (29%), Positives = 357/720 (49%), Gaps = 61/720 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EEIPAR A + + E + ++++ Y TP RL L + LS Sbjct: 1 MGKILFEIGAEEIPARFIPLAISQIEENFKKITSEYRIELESIKVYATPRRLTLLAE-LS 59 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + GP V G K++ F ++ G++ + QIK KG+ AVL Sbjct: 60 SEQASEEKLVWGPPVHVAFDEKGLPKESAYAFAKAQGIE-VDQLQIKP-KGKGNYVCAVL 117 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K + E+VL I+ + +PK MRW +IRP++ L + + Sbjct: 118 SKKGKKTEEVLPEILRNLFYSLNFPKMMRWGEG-----TLRFIRPVRWFLALY-----DD 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + I +++ I N T GHRF + +P+ + +D+Y LE+A V++DPE R+ IL A Sbjct: 168 RFISFEIEGIKTENKTQGHRFLSENPLNIDRVDNYEFILEKAFVIVDPEKRKKIILTQAE 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LA V +++ + +L+EE+ LVE+ + SF +YL LPEEL+ +K +Q+ F Sbjct: 228 ELAKKVNGKILWNNELIEEVTYLVEFPNSVLCSFSMQYLKLPEELLITVMKDHQRYFAII 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L N F++VSN +A + I +G RV+ AR EDA +++ D Sbjct: 288 DNEGKLKNYFVVVSNTKAEN-EENIKKGAERVIKARFEDARFYYEED------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVD 412 L K L + +++H K+G+ ++ RI + ++++ + + LV Sbjct: 334 -------LKKGLVNLLE--ATKGIIYHKKLGSLYDKSLRIIRIAERLSDRLIPEKTELVK 384 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A KADL + +V EFPELQG +G YA AI EH P+G + +P+N Sbjct: 385 IAANYCKADLASGVVGEFPELQGIMGGYYAKNAGMPEEVFLAIREHYLPKGFTDEIPSND 444 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 I +SLADKLD + F+ + E PSG++DP+ LRRA GII I+L+ K + L + + Sbjct: 445 IGCIISLADKLDHIATFFYLGEIPSGTEDPFGLRRAANGIISILLKKKYSLSLLETVSMI 504 Query: 532 ---------QNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFF 581 + + +F R + YL +LI+ I + I ++ ++ F Sbjct: 505 QEFVDEKLKEQISIFIVQRFESYLESTGYDVNLIKTISDFILIRPVYEIKKRLEAVSLFR 564 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 S E+F L+ KR+ I+ EK E++P+ E EK+L+ I + ++ E Sbjct: 565 SKEDFEEFFLAVKRVSNIIKNYEK------FELNPELFSSEEEKKLFNEIEKYKENLYEY 618 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ +++ + + LH + I FFD VLV D +++ NRL+LLQ++ ++ V ++ ++ Sbjct: 619 LNSQQFFEALNYLHKLTPTINNFFDNVLVMDKDEKIKRNRLALLQHLSELLKSVADISRL 678 >gi|303231466|ref|ZP_07318197.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-049-V-Sch6] gi|302513903|gb|EFL55914.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-049-V-Sch6] Length = 683 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 199/728 (27%), Positives = 336/728 (46%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADTSAEISERHKGPSASIAYDAEGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVTDMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVKSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDIAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQDGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL 410 KPL R L +VF +G ++ R+ LG ++ + D + Sbjct: 334 ----------KPLIDRQDGL--TKIVFQEGLGNLADKTERLLTLGHVFSEECELHEDARV 381 Query: 411 V-DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L I Sbjct: 442 QTEAGKVLSIIDKIDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLNSEWNISLRPII 501 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +L F RLK DR++ H +I+ +L ++ L Sbjct: 502 VESMNLLNVPADKQDELLGQVEEFITLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K L + + + + R++ ++ + L +AE+ LY + + Sbjct: 562 VKALLA-NRIDENVELVQAFTRMYNLVK------DVTYTGVDKSLLKEDAERALYEMATK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ D Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASIDAWDKNDYDAVVAVPATLVPGINKFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|325127445|gb|EGC50375.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis N1568] Length = 686 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 208/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 15 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 75 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 133 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 183 SNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 243 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 303 LVSNLQTADP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + A A +RA L+KADL T Sbjct: 342 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGAGAAAAERAARLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 400 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 460 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 519 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 520 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 579 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 635 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 681 >gi|239631413|ref|ZP_04674444.1| glycyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525878|gb|EEQ64879.1| glycyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 689 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 204/731 (27%), Positives = 342/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 3 HQYLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGAIDQYATPRRLALLIHDLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF R G+ D K VYL Sbjct: 63 KQADVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTP-DDIVFKTIKGVDYVYLHKAI 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 122 K-GKTAAAILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDA 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H+ Sbjct: 170 IVPMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 229 IAADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 ASGKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + RL V FH KI + ++++R RV+ +A D A + Sbjct: 336 --------RSIADDVDRLKA--VSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I ++ +++ Sbjct: 446 LVGTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q+L F DR K L + IRHD+++A+ + +L I+ Sbjct: 506 IADALKAAGKTNNLDFTAHQQDLNAFMIDRAKQVLQGQKIRHDIVDAVTVRADADLAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L+ + + + R+ +I ++ + +++ +E +LY Sbjct: 566 DAAKILSAHADDTDFKPVMEALGRVLRITKKQQ-----VKVDVDTAKFENPSEGQLYDAT 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI +FD +V DD+ +R NRL+ L + + Sbjct: 621 VATAKKFDDEPTEADYQ----ALKALADPINAYFDATMVMADDQAIRQNRLAALLQLAAL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IKQFGDVSQVI 687 >gi|167892900|ref|ZP_02480302.1| glycyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 7894] Length = 699 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 208/715 (29%), Positives = 341/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEKIEE-R 70 P + + + + + L +I + +Y TP RL + ++ + +PE+ + Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVRGK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P GA + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAQGAPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HGDRIVPVAAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ + Y L E+ VL RR I A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHANAYADTLREKGRVLAHFAQRRETIRTQLE--ANANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFIDRLRGLLRERGYTAGEIDAVLSLNPTRLDDIVARLNAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L ++D +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEAAEKALAEQLADVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALTALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|212702604|ref|ZP_03310732.1| hypothetical protein DESPIG_00630 [Desulfovibrio piger ATCC 29098] gi|212674045|gb|EEB34528.1| hypothetical protein DESPIG_00630 [Desulfovibrio piger ATCC 29098] Length = 696 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 198/730 (27%), Positives = 318/730 (43%), Gaps = 65/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI SEE+PAR +L+ L+E V + + TP R + ++ ++ Sbjct: 1 MATFVLEIGSEELPARFLAGEEAELAARFTAALQEASVEHGALHTMSTPRRAIVIIEDVN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E+ EE GP V G KA++GF R+ G+ +I + KG+ Sbjct: 61 PVQQEREEEVAGPPVRVAFAADGKPTKALEGFARTNGVSVDDVYRITTE--KGEYVAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R + D+L I P I +P+ K MRW + ++ RPL+ I+ +L + Sbjct: 119 RIGGAAVADLLAEICPAVITSLPFGKRMRWGSN-----TLAYARPLRWIVALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 ++ + + G T GHR H P V + + L + + D RR I+ Sbjct: 169 AVVPFTVGPVASGRETMGHRIHGHGPFSVAHANELLAVLADKGGLTPDAADRRKVIVEGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+A+G +++ LL E+ GL E + FD YL +P E++ +++++QK F Sbjct: 229 DAQAAAIGGKVLWRDGLLGEVQGLTEHPVPLLADFDPSYLEVPREVLLTSMESHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V NI D + + G RV+ ARLEDA FW D Sbjct: 289 EAADGTLMPHFLTVLNISPEDM-SLVKHGWERVLRARLEDARFFWHAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVA 409 L D + +LD V+F ++GT GE+ R+ L + +A+ Sbjct: 336 --------LRDNFDYWLEKLD--HVIFIGRLGTMGEKTRRLEALCRWLAENVAQGKVSAE 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSKADL T +V EF LQG +G YA + E A+ E P GP VP Sbjct: 386 DAARAGRLSKADLVTGMVGEFDTLQGIMGGIYAERKGETPVVAQALREQYLPAGPDSPVP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ADK DTL+ + + P+G+ DP ALRR LGIIRI LE + + Q Sbjct: 446 ASLCGALLSMADKADTLVGCFGLGMIPTGAADPNALRRCALGIIRIGLEFDLHFDIRQLF 505 Query: 530 EDQNL------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + FF R++ Y +R L++A L ++ Sbjct: 506 ARAHELYGDRQWKLAPQEALDKLLDFFAGRVRNYWQNRGEDSLLVDAALGAGVADVCQCG 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L +F A + + + KR+ I+ + +++ L +AEK L A + Sbjct: 566 ARLAALAQFSKEAGYAEAVQTFKRVANIVRKQGAAE-QLAAAWQADLLQEDAEKALAATL 624 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D + + + L + ++ FFD V+V DD +R NRL++L + Sbjct: 625 DDLLPRLDSLWEAGDHTAALKTLLEVRPVVDAFFDGVMVMCDDAALRANRLAMLNALGTR 684 Query: 692 ILIVINVQKI 701 + + + Sbjct: 685 FARLADFAAL 694 >gi|320529362|ref|ZP_08030450.1| glycyl-tRNA synthetase, beta subunit [Selenomonas artemidis F0399] gi|320138328|gb|EFW30222.1| glycyl-tRNA synthetase, beta subunit [Selenomonas artemidis F0399] Length = 687 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 205/731 (28%), Positives = 329/731 (45%), Gaps = 80/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA ++ + +L E+ + Y +R TP R+ L + G + Sbjct: 4 DLLLEIGTEEIPAHAMPNLLREMKRLAGEMLTEQRISYDEIRTLGTPRRMALIVTGAAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP + G KA GF R + I++D G VY AV + Sbjct: 64 QADVNTETRGPAISIAFDADGNPTKAGAGFARGQHVAPED--LIRRD---GYVYAAV-HE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++LK ++P I+ +P P SMRW F +IRP++ I+ + + + Sbjct: 118 TGAPTAEILKELLPALIRAIPLPNSMRWGDLD-----FRFIRPIRWIVALYGTD-----V 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L E+ GN + GHR AP + S Y E A +++DP RR I Sbjct: 168 VPFTLAEVTSGNRSRGHRTLAPEDFTITSAADYETACEAAYIIVDPVRRRAMISEQIADA 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 288 DGSLLPVFITVRNGG-REHLDVVAHGNERVLRARLADAQFFFDEDRK------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-LIDAD------- 407 K L + +L VVF +G+ E+ R+ L + + + D Sbjct: 334 -------KTLAEHREKLHT--VVFQQGLGSMYEKTERLAQLAASVVEDMTAGDDAAYETM 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A RA LSKADL T +V EF ELQG +G+EYA+L E AI+E PR + Sbjct: 385 AADARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGEKPEVARAIDEQYMPRFAGDA 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + + +S+ADK+D ++ ++ + P+GS+DP+ LRR LG++ +++ ++ I LS Sbjct: 445 LPESDLGFALSVADKIDNIVGTFSRGKIPTGSQDPFGLRRQALGLVNMLILHESGILLSD 504 Query: 528 FIEDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I++ ++ F RLK L +R +RHD+ EA+L + D + + Sbjct: 505 LIDEACDLYDLDDAARSKMQGDVAEFIRLRLKNVLTERGVRHDVQEAVL-SDVDAVADVP 563 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + + S R+ I + + P + E+ A++ Sbjct: 564 GRAAYVERLLEESDAAALVQSFVRVGNIARSA------PTGAVDPALFAADEER---ALL 614 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + + + I+ FFD V+V D V+ NRLSLL+ I N Sbjct: 615 AAYEAAAELRAAGGDTAETIAAERRLAVAIDAFFDAVMVMDKDARVKTNRLSLLKSIDND 674 Query: 692 ILIVINVQKIV 702 +L + + KIV Sbjct: 675 LLEIADFSKIV 685 >gi|121592958|ref|YP_984854.1| glycine--tRNA ligase [Acidovorax sp. JS42] gi|229470692|sp|A1W3F3|SYGB_ACISJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120605038|gb|ABM40778.1| glycyl-tRNA synthetase beta chain [Acidovorax sp. JS42] Length = 720 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 215/747 (28%), Positives = 353/747 (47%), Gaps = 79/747 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L+ L+ +G+ + + + +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALQKLGDAFAGVLLEQLQAQGLTSAHSQLTAFASPRRLAAHITEVL 64 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAV 112 P + +K + ++L P G A+ L + G S Q+K+ K +V Sbjct: 65 PAAADKAVSQKLMPVAVGLDASGQPTPALLKKLTALGADAASVPQLKRVHDGKAEVLFFE 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 L+ D L+ + AI K+P PK MR+ ++ ++RP ++ + + Sbjct: 125 SMAKGALLADGLQKALDEAIAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVALHGTQV-- 181 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 ++ + + GN T+GHRF A P+ +QS D Y L E V+ RR I Sbjct: 182 --LVGVQALGLTAGNTTHGHRFEASVDPVVIQSADSYAEQLRSEGAVIASFAERRAEIAR 239 Query: 231 DAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A VG +ED LL+E+ LVE V + F+K++L +P+E + LT+K NQK Sbjct: 240 QLQAAADRVGGGVRPIEDAALLDEVTALVERPNVLVCEFEKEFLAVPQECLILTMKANQK 299 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F EG L + F++VSNI D +A++QGN RVV RL DA F+ +D+ Sbjct: 300 YFPLLDAEGKLTHQFLVVSNISPQDA-SAVIQGNERVVRPRLADAKFFFDQDRK------ 352 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---- 404 K L R+ +L VV+H K+GTQGERV R+R + K IA + Sbjct: 353 --------------KTLVSRVDQL--AKVVYHNKLGTQGERVERVRHIAKAIATQLFTAL 396 Query: 405 ----------DADVAL------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNEN 448 + ++A VD A +L+K DL T++V EFPELQG +G YAV Sbjct: 397 AQGNAALDSQEGEIAQDYLLTCVDNAALLAKTDLVTDMVGEFPELQGIMGGYYAVSDGLP 456 Query: 449 ISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRA 508 AIE+H KPR + +P + + V+LADKL+TL+ + I P+G +DP+ALRR Sbjct: 457 DEVAHAIEDHYKPRFAGDALPRENVGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRH 516 Query: 509 TLGIIRIILENKIDIPLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDL 555 LG+IR+++E ++ + L L F +DRL L ++ Sbjct: 517 ALGVIRMLVEKELPLDLDALLASAVPAFGDKIEDTSAQLADFIYDRLAGSLREQGYSAQE 576 Query: 556 IEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 ++A++ L + ++ + F + + KR+ IL KK E+ ++ Sbjct: 577 VDAVIALRPQRLALVPRQLEAVRAFTQLEEAPALAAANKRVTNIL----KKAGEVDPHVN 632 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 + L AEK LYA + F D Y L + P++ FFD V+VN ++ Sbjct: 633 EELLQEPAEKDLYAALQRFVPEANAQFDSGDYTASLQTLAVLRAPVDAFFDDVMVNAEEL 692 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKIV 702 +R NR LL+ + + V ++ ++ Sbjct: 693 ALRLNRQGLLKKLHMAMNRVADLSRLA 719 >gi|116494987|ref|YP_806721.1| glycyl-tRNA synthetase, beta subunit [Lactobacillus casei ATCC 334] gi|227535007|ref|ZP_03965056.1| glycine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|122263595|sp|Q038U3|SYGB_LACC3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116105137|gb|ABJ70279.1| glycyl-tRNA synthetase beta chain [Lactobacillus casei ATCC 334] gi|227187322|gb|EEI67389.1| glycine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 689 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 204/731 (27%), Positives = 342/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 3 HQYLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGAIDQYATPRRLALLIHDLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF R G+ D K VYL Sbjct: 63 KQEDVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTP-DDIVFKTIKGVDYVYLHKAI 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 122 K-GKTAAAILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDA 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H+ Sbjct: 170 IVPMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 229 IAADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 ASGKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + RL V FH KI + ++++R RV+ +A D A + Sbjct: 336 --------RSIADDVDRLKA--VSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I ++ +++ Sbjct: 446 LVGTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q+L F DR K L + IRHD+++A+ + +L I+ Sbjct: 506 IADALKAAGKTNNLDFAAHQQDLNAFMIDRAKQVLQGQKIRHDIVDAVTVRADADLAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L+ + + + R+ +I ++ + +++ +E +LY Sbjct: 566 DAAKILSAHADDTDFKPVMEALGRVLRITKKQQ-----VKVDVDTAKFENPSEGQLYDAT 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI +FD +V DD+ +R NRL+ L + + Sbjct: 621 VATAKKFDDEPTEADYQ----ALKALADPINAYFDATMVMADDQAIRQNRLAALLQLAAL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IKQFGDVSQVI 687 >gi|325206837|gb|ADZ02290.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis M04-240196] Length = 687 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 211/707 (29%), Positives = 352/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIAGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+++ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDKVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTADP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|302879305|ref|YP_003847869.1| glycyl-tRNA synthetase, beta subunit [Gallionella capsiferriformans ES-2] gi|302582094|gb|ADL56105.1| glycyl-tRNA synthetase, beta subunit [Gallionella capsiferriformans ES-2] Length = 703 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 211/740 (28%), Positives = 350/740 (47%), Gaps = 76/740 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYL 56 M + L+E++ EE+P + K E S +L L + ++ + + +P RL +++ Sbjct: 1 MSTKNLLVELFVEELPPKSLKKLGESFSQVLSASLVAQNLVLPGTEITSFASPRRLAVHV 60 Query: 57 KGLSPHSPEKIEE-RLGP------RVGAGKKAIDGFLRSTG--LQTISDCQIKKDPKKGD 107 +G+ + +K +L P G A+ L G + +S + + D K Sbjct: 61 EGVIAQAADKSVSLKLMPVKVGLDAAGNATPALLKKLAGLGADVSVVSSLRTEMDGKAEA 120 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS-PISAFSWIRPLKSILCIL 166 +Y L P + D L+ + A+ K+P + M + S +++RP S++ + Sbjct: 121 LYFDSLV-PGVKLVDGLQRALNDALAKLPIARVMTYPDPTGDGWSTVNFVRPAHSLVALY 179 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECR 224 KI+ + + + GN+T GHRF A I ++ D Y R LE E V+ R Sbjct: 180 -----GRKIVPVSVLGLTAGNVTQGHRFEASVDAIVLEDADSYARQLETEGAVIASFAQR 234 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R I+ ++A+ GL+ + D DLL+E+ LVE V MG F++ YL +P E + LT+K Sbjct: 235 RAEIVRQLAKMAAKEGLQAIHDDDLLDEVTALVERPNVLMGRFEETYLEVPPECLILTMK 294 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 NQK F G L+N F++VSNI D + ++ GN RVV RL DA F+ +D+ Sbjct: 295 ANQKYFPLLEVSGRLSNKFLIVSNISPKDA-SLVIGGNERVVRPRLADAKFFFDQDRK-- 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 KPLD R+ L + VV+H K+GTQGERV R++ + + I + Sbjct: 352 ------------------KPLDARV--LGLSRVVYHNKLGTQGERVERVQAIARAIGMQL 391 Query: 405 DADVALVDRAIVLSKADLC--------TEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + + T++V EFPELQG +G+ YA AIE Sbjct: 392 GGEAQALQADQA------ALLAKADLLTDMVGEFPELQGIMGRYYAQHDGLTDEVAFAIE 445 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 +H KPR + +P N I V+LADKL+TL+ + I + P+G +DP+ALRR LG+IR++ Sbjct: 446 DHYKPRFAGDTLPRNSTGICVALADKLETLVGMFGIGQIPTGDRDPFALRRHALGVIRML 505 Query: 517 LENKIDIPLSQF--------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP 562 +E ++ + L+ + F DR+ + ++ + ++A+L P Sbjct: 506 VEKQLPLTLTDLVAGAFAGFSKGLLADAQAEVETFIFDRIGGMMREQGYTANQVDAVLAP 565 Query: 563 ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 L I + + F + + + KR+ IL +K E+S+E+ L+ + Sbjct: 566 RPQRLSEIPMRLDAVRAFAALPESAALAAANKRVGNIL---KKVEGEVSVEVDRARLVED 622 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AE LY + T + Y L ++ P++ FFD V+VN DD +R NRL Sbjct: 623 AELALYQALQSIATDADAAFAAGDYTTSLQALAALRAPVDAFFDSVMVNADDPALRANRL 682 Query: 683 SLLQYIKNIILIVINVQKIV 702 SLL + + V ++ ++ Sbjct: 683 SLLARLHQAMNRVADLSRLA 702 >gi|191638499|ref|YP_001987665.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus casei BL23] gi|238693042|sp|B3WEK6|SYGB_LACCB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|190712801|emb|CAQ66807.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus casei BL23] gi|327382534|gb|AEA54010.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus casei LC2W] gi|327385731|gb|AEA57205.1| Glycyl-tRNA synthetase beta subunit [Lactobacillus casei BD-II] Length = 689 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 204/731 (27%), Positives = 342/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 3 HQYLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGAIDQYATPRRLALLIHDLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF R G+ D K VYL Sbjct: 63 KQADVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTP-DDIVFKTIKGVDYVYLHKAI 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 122 K-GKTAAAILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDA 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H+ Sbjct: 170 IVPMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 229 IAADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 ASGKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + RL V FH KI + ++++R RV+ +A D A + Sbjct: 336 --------RSIADDVDRLKA--VSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I ++ +++ Sbjct: 446 LVGTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q+L F DR K L + IRHD+++A+ + +L I+ Sbjct: 506 IADALKAAGKTNNLDFAAHQQDLNAFMIDRAKQVLQGQKIRHDIVDAVTVRADADLAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L+ + + + R+ +I ++ + +++ +E +LY Sbjct: 566 DAAKILSAHADDTDFKPVMEALGRVLRITKKQQ-----VKVDVDTAKFENPSEGQLYDAT 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI +FD +V DD+ +R NRL+ L + + Sbjct: 621 VATAKKFDDEPTEADYQ----ALKALADPINAYFDATMVMADDQAIRQNRLAALLQLAAL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IKQFGDVSQVI 687 >gi|269792671|ref|YP_003317575.1| glycyl-tRNA synthetase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100306|gb|ACZ19293.1| glycyl-tRNA synthetase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 691 Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 196/720 (27%), Positives = 336/720 (46%), Gaps = 61/720 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EEIPA E++ + L+ + Y + Y TP RL LY++ L+ Sbjct: 6 DLLFEIGTEEIPASFLAFGLEEVKRLAKEELEAASLRYGAIESYGTPRRLALYVRDLAER 65 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G K GF +S G++ D +D K AV+R+ Sbjct: 66 QDDVEEEIRGPMWSQAFDPNGHPTKVAVGFAKSRGVEV--DALEMRDVKGVPYAFAVVRR 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L I+ + ++ +PK+M WS + + RP++ ++ + +++ Sbjct: 124 EGQETSSLLPDILSRILHRLVFPKNMYWSDP-----SVRFARPIRWLVALW-----GDQV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I + + + G ++ GHRF ++++S Y+ L V+ P RR +L+ L Sbjct: 174 IPVTVGNVTSGRVSRGHRFLGKRAVEIRSAGEYLDALYGEFVIAHPGKRREKMLSAIASL 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + +G ++ D DL+EE LVE+ F G+FD +L +P+E++ T+K +Q+ F R Sbjct: 234 ENEMGGKVELDPDLVEENCNLVEYPVPFFGTFDASFLEMPQEVLCTTMKKHQRYFPVRDS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G LA CF+ VSN QA+ + +GN RV+ ARL DA FW D+ Sbjct: 294 KGNLAPCFVGVSNNQAT-LMQNVREGNERVLRARLSDASFFWDEDRK------------- 339 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVDR 413 K L R+ L +VV+ K+G+ ++V +R + + + + + L+DR Sbjct: 340 -------KGLASRVEALK--NVVYQEKLGSVYDKVQSVRSVALWLGEQLGMVDKLNLLDR 390 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +LSKADL T +V EFPELQG +G+EYA E A+ E PR +++P+ I Sbjct: 391 AALLSKADLVTSMVYEFPELQGVMGREYARCSGEAPEVALALYEQYLPRFAGDSLPSQPI 450 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----- 528 + +A++ T++ + +P+ S+DP+ LRRA I I+ +D+ + Q Sbjct: 451 GAVLGVAERAYTIVAIHHVGLEPTSSQDPHGLRRAARCINEILWGLDLDVAVDQLFLKVA 510 Query: 529 -------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + + FF RL + L +R H L+ + L + L++ L Sbjct: 511 EVLGADRPVVEKAMEFFRQRLLVQLRERGFSHGLVSLGVDCIWSRPLQALKLLEVLEGLK 570 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + +A R+ IL K+ I+ E+ E L + + E+ Sbjct: 571 GEDWFGSLVTAAIRVRNILLKA--KDERIASEMDGA---EGVELELLNELRAVRPCLDEA 625 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + +HQ+ LLH + P+ FFD V+V D EVR RL +L+ + + ++ + + Sbjct: 626 LGEFDWHQVARLLHRLEGPVRAFFDGVMVMDQDPEVRARRLGILKEAQGLFDLIGDFSNL 685 >gi|225077471|ref|ZP_03720670.1| hypothetical protein NEIFLAOT_02534 [Neisseria flavescens NRL30031/H210] gi|224951220|gb|EEG32429.1| hypothetical protein NEIFLAOT_02534 [Neisseria flavescens NRL30031/H210] Length = 687 Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 212/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + ++ I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGSD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I + + D Y + E V R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEITITNADSYAEQMREQGKVEASFAERKAAIQTALEGQAHRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|332364608|gb|EGJ42377.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1059] Length = 679 Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 213/725 (29%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FFH R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFHARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINPALFENQEEKDLAAAIESVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKVGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 KFNQI 676 >gi|319638992|ref|ZP_07993750.1| glycyl-tRNA synthetase beta subunit [Neisseria mucosa C102] gi|317399896|gb|EFV80559.1| glycyl-tRNA synthetase beta subunit [Neisseria mucosa C102] Length = 687 Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 214/707 (30%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGAAEYTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D + D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTVIND-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ S++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHSLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI + A + + Sbjct: 184 GNKTLGHRFLSSGKIAIENADSYAAQMREQGKVEASFAERKAAIQTALNEQAGRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALYAAAQGLQPKISAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|326693036|ref|ZP_08230041.1| glycyl-tRNA synthetase subunit beta [Leuconostoc argentinum KCTC 3773] Length = 686 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 212/731 (29%), Positives = 335/731 (45%), Gaps = 76/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + ++ Y TP RL + L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTPSEAQLVTRTAAFLAEHRLAVGEIKAYSTPRRLAVQLLDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G + + G V+L Sbjct: 61 AESETLSEEKRGPSIDRAKDEQGNWTKAAQGFARGQGTTPED-----FEERDGYVWLTKT 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P ++L I + ++ + M+W+ AF ++RP++ ++ +L + Sbjct: 116 -TPGVPAAEILAQIGDEVVAQMKFSTYMKWANN-----AFLYVRPIRWLVALL-----DD 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++D + ++ IT GHRF + + + + D Y+ L A VL+D E RR I Sbjct: 165 KVLDFSILDVQTDRITRGHRFLSNEQVTIPTADDYVETLRAAHVLVDAEERRATISQQLA 224 Query: 234 RLASAVGLELVED----KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A G L D +DLLEE+ +VEW F GSFD+KYL +P++++ +++ +Q+ Sbjct: 225 AIAQENGWVLQLDSDKSQDLLEEVNNIVEWPTAFAGSFDEKYLAVPDDVLMTSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L F+ V N D ++ GN +V+ ARLEDA F+ DQ Sbjct: 285 FYVTDQSGQLLPHFLSVRNGN-DDHLGDVIAGNEKVLVARLEDAEFFYHEDQQ------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 K + MA+++ L VFH KIGT E + R+ +L ++A + D Sbjct: 337 -------------KTIADYMAKVEKL--VFHEKIGTVYEHMQRVGLLAAELADKLGFDDT 381 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A + RA + K DL T +V EF ELQG +G+ YA L EN + A+ EH P Sbjct: 382 KKADLARAADIYKFDLMTGMVGEFDELQGIMGEHYAQLFGENTAVATAVREHYMPTSAAG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 V + I +++ADKLDTL++F+A N PSGS DPY LRRA GI+R + + I L+ Sbjct: 442 EVAQSDIGAVLAIADKLDTLVSFFAANLVPSGSNDPYGLRRAATGIVRTLQARQWRIALA 501 Query: 527 QFIE--------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIV 571 +E + F DR++ D R DL+ A N +++ + Sbjct: 502 PLLESFIAKTGDVSSHADTTAIRAFILDRVRKLALDAGTRQDLVAAGTANVVNLDVVYVA 561 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ L + + S R+ ++ + + P EAE LYA Sbjct: 562 QRVQTLAQHADDTNFRDVIASLTRVSRLAVKY-----DTDATVDPALFENEAEVALYAAT 616 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 H + + L ++ PI +FD +VNVDD V++NR + L I + Sbjct: 617 QSLDLHTLVLAGSE---AVYQALANLQAPIAAYFDATMVNVDDEAVKNNRYAQLHLINRL 673 Query: 692 ILIVINVQKIV 702 I + +++KIV Sbjct: 674 ISGLGDLEKIV 684 >gi|116626245|ref|YP_828401.1| glycine--tRNA ligase [Candidatus Solibacter usitatus Ellin6076] gi|116229407|gb|ABJ88116.1| Glycine--tRNA ligase [Candidatus Solibacter usitatus Ellin6076] Length = 646 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 219/703 (31%), Positives = 334/703 (47%), Gaps = 68/703 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 LLEI +EEIP M A E+L + L + ++++R TP RL L ++G+ Sbjct: 5 LLLEIGTEEIPDWMITTALENLRMSFEKL----EITHESVRLDATPRRLVLRVEGVPAKQ 60 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 + E LGP A KA++GF R G+ + KG+ Y+ + P R I+D+ Sbjct: 61 QDSEERILGPAKSAPPKAVEGFARKQGIAPED--LTVESTGKGEYYVYQKKVPGRFIKDI 118 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L +P I + +PK+M W + +IRP++ I+ +L E+II +L + Sbjct: 119 LAEALPGIILGLYFPKTMYW----TGKGGPRFIRPIRWIVALL-----GEEIIPFELAGV 169 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 G +T GHR I + + D Y + L + V+L + RRN I + + Sbjct: 170 RSGALTSGHRRLGAREIAITTSD-YEQRLRDHGVILSAQERRNQIRAGI------ADVRI 222 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCF 303 D LLE ++ L E+ + GSFD ++L LPEE++ ++ +QK F G LA F Sbjct: 223 KSDDALLETLVYLTEFPRPIRGSFDPQFLELPEEVLITVMRHHQKYFSVEDASGKLAPEF 282 Query: 304 ILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSK 363 + V NI + D + +GN RV+ AR DA FW DQ K Sbjct: 283 VAVMNIDS-DPEGFVRRGNERVLRARFNDARFFWDADQK--------------------K 321 Query: 364 PLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLC 423 PL R + D+ +V F AK+G+ + R+ L + + D V RA L K DL Sbjct: 322 PLAAR--KQDLANVTFQAKLGSYLVKTERMMALAAE----LGGDANAV-RAAELCKCDLT 374 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 TE+V+EF ELQG +G YA +Q E + AI +H KP + +P N ++ VSLADKL Sbjct: 375 TELVKEFTELQGVVGGLYARVQGEPEAVWQAIYDHYKPESMEDALPRNATALIVSLADKL 434 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI-LFFHDRL 542 DTL + + P+GSKDP+ALRRA G++RI++E K+ +PL I + FF +R+ Sbjct: 435 DTLRGCFGVGMVPTGSKDPFALRRAAQGVVRILVEGKLPLPLLDLIGRDEALRAFFEERV 494 Query: 543 KLYLHD-RDIRHDLIEAILRP--ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 + Y D R +D + A + NL+ + ++ + +S E S KRI I Sbjct: 495 RYYFKDIRGFAYDEVNACMAASVGWSNLVDLESRLERVRALRASPDFEPLAASFKRIRNI 554 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 L + I L E+ LY ES+ + + Sbjct: 555 LEQAKFSGG---GAIDEALLEDGPERELYTEFRGIQAQPIESV-----------ISRLRP 600 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +++FFD+VLVN D VR NRL+LL + + + +IV Sbjct: 601 RVDLFFDKVLVNAPDPVVRQNRLTLLSTLLAEFSTMADFSEIV 643 >gi|260655940|ref|ZP_05861409.1| glycyl-tRNA synthetase, beta subunit [Jonquetella anthropi E3_33 E1] gi|260629556|gb|EEX47750.1| glycyl-tRNA synthetase, beta subunit [Jonquetella anthropi E3_33 E1] Length = 686 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 212/722 (29%), Positives = 338/722 (46%), Gaps = 61/722 (8%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D + EI +EEIPAR A L L++E + + + Y TP RL L+L+ + Sbjct: 1 MAKDLVFEIGTEEIPARFMTDALAALKAAAADELEKERIRVRRVDTYGTPRRLVLFLRDV 60 Query: 60 SPHSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + EE GP +A +GF +S G+ I+K D A Sbjct: 61 PDRQDDLCEEFKGPAWKNCFDVNGYPTRAAEGFAKSRGVDVSD--LIRKPSGNVDYAFAQ 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +E+VL ++ K+ +PK+M WS + RP++ ILC+L Sbjct: 119 KSASGLPVEEVLPALLTRVAGKLVFPKNMFWSDP-----TVRFARPIRWILCLL-----G 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +K+I ++L + G +T GHRF ++V Y+ L + V++D E RR +L Sbjct: 169 DKVIPVELSGVKSGRVTRGHRFMGCSAVEVPDAASYLSVLYDQSVIVDQEKRREKMLAAI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + +G + + L+EE + LVE+ F G FD KYL LPEE++ ++K NQK F Sbjct: 229 ASIERELGGTVELEDGLVEENLYLVEYPVPFAGKFDPKYLLLPEEVLITSMKVNQKYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R+ G L F+ VSN + + I +GN RV+ ARLEDA FW+ D Sbjct: 289 RSSSGKLLAMFVGVSNNKPA-TMDLIREGNERVLRARLEDAAFFWQED------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--DADVAL 410 L KPL R+ L VV+ K+G+ ++ + +A + A+ L Sbjct: 336 --------LKKPLSARLDGLK--QVVYQEKLGSVYDKTQWMTGYAVWLADQLNLGAEKTL 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA LSK DL T++V EFPELQG +G+ YA E+ A+EE PR + VPT Sbjct: 386 VQRAAQLSKTDLITQMVGEFPELQGVMGRAYAKENGEDPRVALALEEQYLPRSAGDKVPT 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + + V LA+++ +++ + + +PSGS+DPY LRRA + I+ KID+ + + Sbjct: 446 DIVGALVGLAERIFSMVGAYKLGFRPSGSQDPYGLRRAVRCVNEILWALKIDLDMGKALD 505 Query: 529 ----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++L + R L ++ HDL+ E N + L+K + Sbjct: 506 EACRTLSLDEEAQKSLREYVASRTFGQLKEQGFPHDLVALAADAEGSNPWQELCLLKAYS 565 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 + A +A R+ ILA + + Q ++AEK L+ + I Sbjct: 566 SVSAQAWFAGLREAAGRVKNILAKAPSR----PETVDAQLFKIDAEKGLWNAVETLREPI 621 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 + + R++ + + L + + FFDQV+V DD VRDNRL+LL + + +V ++ Sbjct: 622 AQDVAECRWNDLMERLAGLAPAVAAFFDQVMVMDDDAAVRDNRLALLLHCDRLFSLVGDL 681 Query: 699 QK 700 + Sbjct: 682 SR 683 >gi|121635587|ref|YP_975832.1| glycyl-tRNA synthetase subunit beta [Neisseria meningitidis FAM18] gi|229558566|sp|A1KW08|SYGB_NEIMF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120867293|emb|CAM11064.1| putative glycyl-tRNA synthetase beta subunit [Neisseria meningitidis FAM18] Length = 687 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 211/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINAAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T GHRF + I +++ D Y + E V+ R+ AI A + + Sbjct: 184 SNQTLGHRFLSNGEITIENADSYAAQMREQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ +DAD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALDADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + E ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELGE----VNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|240112074|ref|ZP_04726564.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] gi|268598133|ref|ZP_06132300.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] gi|268582264|gb|EEZ46940.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] Length = 687 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 209/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D ++ DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHDGRQ-DVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 NIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|225872264|ref|YP_002753719.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium capsulatum ATCC 51196] gi|254781841|sp|C1F1J0|SYGB_ACIC5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225792055|gb|ACO32145.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium capsulatum ATCC 51196] Length = 706 Score = 677 bits (1747), Expect = 0.0, Method: Composition-based stats. Identities = 202/737 (27%), Positives = 347/737 (47%), Gaps = 68/737 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG 58 M +FL EI EEIPARM A +L+ + LL+ E ++ + + +Y TP RL + + G Sbjct: 1 MAEFLFEIGLEEIPARMIAAAESELARRVAELLQREDLLAEGHAVTRYSTPRRLAVLVTG 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++ E+ GP G A F + G++ + ++ KG+ A Sbjct: 61 VKAAQADREEQLTGPAWSIAFKDGQPTPAAQAFAKKAGVEVAALQKV--TTPKGEYVGAS 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L +P I + WPK+M W ++RP++ ++ +L Sbjct: 119 SVRKGRAANEILLEALPKEIAAIYWPKNMYWRAGK----PERFVRPVQWMVALL-----G 169 Query: 173 EKIIDLDLKEIPCGNITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E++I ++ + N+TYGHR H P+ + + Y LE A V D E RR+ I Sbjct: 170 EQVIPVEFAGVTAANVTYGHRILHGDAPVAIPAPMEYAATLEAAKVQADVEARRHRIRKA 229 Query: 232 AHRLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + V G ED+ L++ + L EW V +GSF+ ++L LPEE++ ++ +QK F Sbjct: 230 LDHVTRTVPGARWREDEALVDAVTHLTEWPSVLLGSFETEFLALPEEVLVTVMRDHQKYF 289 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSS 349 G LA F+ N + SD AAI++ GN RV+ AR DA FW DQ Sbjct: 290 AVEDAAGKLAPHFLTALNTEPSDQAAAIIRHGNERVLRARFNDARFFWTVDQKI------ 343 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI----- 404 L R+ L V FH ++G+ ++ R + K++ + Sbjct: 344 --------------SLANRLEMLQ--SVTFHKELGSYHQKTHTTREIAVKLSAQVRHAGT 387 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D A + RA+ L+K DL TE+V+EF ELQG +G YA Q E + AI P Sbjct: 388 SVDEAALLRAVELAKTDLTTELVKEFTELQGIVGGLYARAQGEGEAVAQAIYWQYSPASM 447 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P + LAD++ T++ +AI +P+GSKDP+ALRRA +++I+ E K+ + Sbjct: 448 DDPIPPTLEGQLLGLADRIGTIVEMFAIGLEPTGSKDPFALRRAANAVVKILAEGKLPVT 507 Query: 525 LSQFIE--------------DQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLT 569 L + + + ++ F +RL+ Y+ + R+D++ A+L +++ Sbjct: 508 LDRLLNAAEESSKVENAAASREKVMAFLKERLEFYMREVLGYRYDVVNAVLAAGAHDVVD 567 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR----EISLEISPQYLLLEAEK 625 + + L+ S + KR IL +K +S ++ L AEK Sbjct: 568 TIARAEALSAVRGSEDFAAIAAAFKRSKNILRQAAEKAGVAEDSLSADVDAALLPEPAEK 627 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 +L+ + ++E Y + + ++ +++FFD+V+V V+D +R NRL+L+ Sbjct: 628 QLHEAAAKLAPVVEELRAKNDYRAALEQIATLRPQVDLFFDKVMVMVEDDLLRHNRLALI 687 Query: 686 QYIKNIILIVINVQKIV 702 QY+ + + +IV Sbjct: 688 QYVLRSFSSIADFSEIV 704 >gi|240127362|ref|ZP_04740023.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268685735|ref|ZP_06152597.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268626019|gb|EEZ58419.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] Length = 687 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 212/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIVHDGRQ-DVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADI 682 >gi|59802450|ref|YP_209162.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA 1090] gi|81311133|sp|Q5F4Y7|SYGB_NEIG1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|59719345|gb|AAW90750.1| putative glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae FA 1090] Length = 687 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 209/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIVHDGRQ-DVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 NIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADI 682 >gi|237746627|ref|ZP_04577107.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes HOxBLS] gi|229377978|gb|EEO28069.1| glycyl-tRNA synthetase subunit beta [Oxalobacter formigenes HOxBLS] Length = 694 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 194/715 (27%), Positives = 341/715 (47%), Gaps = 62/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + K A+ + + L+++ + + Y TP RL + + + SP+K I ++ Sbjct: 15 PPKALTKLADSFAGTIEKSLRQDDFLTDASKKTVYATPRRLAITITNVRDVSPDKPIRQK 74 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIK-KDPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + + I ++ K D + Sbjct: 75 VLPVSVALDADGKPTAPLKKKLAALNIPDIDISTLEVARDGKNDCLFYNYTASGIPLAAS 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ V A ++P PK M + ++RP+ I+ + E ++ + L + Sbjct: 135 LQKAVEKAAHELPVPKMMTYQRPDGE--TVEFVRPVHEIVAM-----HGENVVPIALLGL 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G T+GHRF + I + + D+Y LE ++ + R++ I A + A G + Sbjct: 188 SAGRTTHGHRFLSQGEIGILAADYYAVTLETRGKIIPGFQARKDRIR--AMLIEKAKGDK 245 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 ++ + LL+E+ LVEW V+ F++ +L +P+E + LT++TNQK F EG L + Sbjct: 246 VLMPESLLDEVTALVEWPIVYECHFEESFLEVPQECLILTMQTNQKYFALTDAEGRLRSR 305 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSN++ + I+ GN RV+ RL DA F+++D+ Sbjct: 306 FLIVSNMET-NTPQRIISGNERVIRPRLSDARFFFEQDKK-------------------- 344 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 K L++R+ L +VV+H K+GT +R++R+R+L IA + D LVDRA L KADL Sbjct: 345 KRLEERLPGL--ANVVYHNKLGTLAQRMARVRLLAVFIAGKMGIDTQLVDRAARLVKADL 402 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 TE+V EFPELQG +G YA E+ A EH +PR + +P ++LADK Sbjct: 403 LTEMVGEFPELQGIMGTYYARHDGEHEEVALACTEHYQPRFAGDVLPATPTGTAIALADK 462 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 L+TL W I +P+G +DP+ALRR LGI+RI++E K+ + L + + + Sbjct: 463 LETLAGIWGIGLQPTGDRDPFALRRHALGILRILIEKKLPLSLRKMLAEAVGILSTNATM 522 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + ++ F +RL+ L DR I+A+L D ++D ++ + F + + Sbjct: 523 TDPTEGVLAFVMERLRGLLRDRGYSPAEIDAVLAQNPDRFDNLIDRLEAVRAFAAMPESV 582 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL + ++ +I L ++EK+L+A ++ Y Sbjct: 583 SLAAANKRITNILKKSDINAGDVHTDI----LAEDSEKKLFADMTVVKPEADRKFAAGDY 638 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L + + ++ FF V+V DD +R+NR++LL+ + ++ V ++ K+ Sbjct: 639 TGTLKTLAQLRDDVDAFFTNVMVMTDDTRLRNNRIALLKQLHAMMNQVADISKLA 693 >gi|301066555|ref|YP_003788578.1| glycyl-tRNA synthetase subunit beta [Lactobacillus casei str. Zhang] gi|300438962|gb|ADK18728.1| Glycyl-tRNA synthetase, beta subunit [Lactobacillus casei str. Zhang] Length = 689 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 204/731 (27%), Positives = 342/731 (46%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +L+EI E++PA + + + + LKE + + + QY TP RL L + L+ Sbjct: 3 HQYLIEIGLEDMPAHVVTPSLQQFHDKTVAFLKENHLDHGVIDQYATPRRLALLIHDLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF R G+ D K VYL Sbjct: 63 KQADVEEDVKGPAKKIAQDADGNWTKAAIGFSRGQGMTP-DDIVFKTIKGVDYVYLHKAI 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 K + +L ++ I+ + +P M+W F +IRP+ ++ +L + Sbjct: 122 K-GKTAAAILPGML-DVIKSLTFPTRMKWGAYD-----FEYIRPIHWLVSLL-----DDA 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 I+ + L ++ G T GHRF P+ + + Y+ L+ V+++P R+ I + H+ Sbjct: 170 IVPMKLLDVDAGRTTQGHRFLG-RPVTLGNAADYVAALKAQFVIVEPAARKQLISDQIHQ 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A+ ++ D DLLEE+ LVEW F G+FD+KYL +PE ++ ++K NQ+ F R Sbjct: 229 IAADHQWQIDLDADLLEEVNNLVEWPTAFAGNFDEKYLKIPEAVLITSMKDNQRYFYARD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G + N FI V N A D A ++ GN +V+ ARLEDA F+ DQ Sbjct: 289 ASGKMVNAFIGVRNGNA-DHLANVIAGNEKVLTARLEDAAFFYAEDQK------------ 335 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALV 411 + + + RL V FH KI + ++++R RV+ +A D A + Sbjct: 336 --------RSIADDVDRLKA--VSFHDKISSMYDKMARTRVIADLLADRFGLSATDKADL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA + K DL T +V EFPELQG +G+ YA L E + AI EH +P +P + Sbjct: 386 DRAASIYKFDLVTSMVGEFPELQGIMGEHYAQLAGEKPAVAQAIAEHYEPISADGALPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI-- 529 + +++ADK D+L++F+A++ PSGS DPYALRR GI+R+I ++ +++ Sbjct: 446 LVGTVLAIADKFDSLMSFFAVDLIPSGSNDPYALRRQAYGIVRMIAKHDWPFAVAELQTT 505 Query: 530 ------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q+L F DR K L + IRHD+++A+ + +L I+ Sbjct: 506 IADALKAAGKTNNLDFAAHQQDLNAFMIDRAKQVLQAQKIRHDIVDAVTVRADADLAGIL 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D K L+ + + + R+ +I ++ + +++ +E +LY Sbjct: 566 DAAKILSAHADDTDFKPVMEALGRVLRITKKQQ-----VKVDVDTAKFENPSEGQLYDAT 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + Y L ++ +PI +FD +V DD+ +R NRL+ L + + Sbjct: 621 VATAKKFDDEPTEADYQ----ALKALADPINAYFDATMVMADDQAIRQNRLAALLQLAAL 676 Query: 692 ILIVINVQKIV 702 I +V +++ Sbjct: 677 IKQFGDVSQVI 687 >gi|323697788|ref|ZP_08109700.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. ND132] gi|323457720|gb|EGB13585.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio desulfuricans ND132] Length = 702 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 205/735 (27%), Positives = 342/735 (46%), Gaps = 69/735 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F+LEI +EE+PAR K A +L L E V ++ Y TP R+ ++ L+ Sbjct: 1 MAEFILEIGTEEMPARFVPKLAAELEEAFAKGLTESMVENGGVKCYATPRRITAHVPSLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E GP V G KA GF ++ G+ D + + KG+ A Sbjct: 61 LAQLSQEETVTGPPVRIAYDGDGNLTKAGQGFAKTQGVA--EDALFRMETDKGEYLAAKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L + I+ + +PK M W F++ RP++ +L +L A+ Sbjct: 119 TVGGGRTIDILPALCVKCIESLSFPKRMHWGDYD-----FTFGRPVRWLLALLDAD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECRRNAILNDA 232 +++ L+ + G T GHR P P V S Y + + V++DP RR I+ + Sbjct: 170 -VVEFTLENLTSGRETRGHRVMGPGPFSVASSADYFSVVRDQCKVVIDPVERRETIVAEG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +RLA A+G +V + LL+E+ LVE+ + +G D YL LP E++ +++++QK F Sbjct: 229 NRLAQALGGSIVWNDGLLDEVANLVEYPKPLIGDIDPLYLALPREVLLTSMQSHQKSFGL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ N++ D A + +G RV+ ARLEDA FW+ D Sbjct: 289 EGADGRLLPHFLTTLNLEPLD-VALVKKGWERVLKARLEDARFFWEADCEV--------- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA------ 406 D + +L+ VVF +G+ G++ RI L +K+A+ +DA Sbjct: 339 -----------EFDTWLEKLE--HVVFLGPLGSVGDKSRRIETLCRKLAETLDASQSILP 385 Query: 407 -DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 ++ RA L+KADL +E+V EF LQGK+G YA I E P GP Sbjct: 386 GEIEQYARAGRLAKADLVSEMVIEFDSLQGKMGGIYAERAGLGEIVSKGIYEQYLPAGPD 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 VP++ VS+ADK DT+ + + + P+G+ DPYALRR LGI RII+E+ +D+ L Sbjct: 446 TPVPSSLSGALVSMADKADTMAGCFGLGKVPTGANDPYALRRCALGISRIIMEHDLDLDL 505 Query: 526 SQFIEDQNL------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 F++ + FF RL+ + +++A L +++ Sbjct: 506 EAFLKAAQKAYSGVKWKVEQNEALDKLLDFFAQRLRALFTGQGFDTRVVDAALGAGFNDI 565 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE-ISLEISPQYLLLEAEKR 626 T+ + L EF A E+ +L+ KR I+ + + E ++ E E Sbjct: 566 RTLKARLDALAEFSRGADFERSVLTFKRAANIIRKQGDEAGEPLTGSYDADLFEDEHETA 625 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 A + + + +++ + + LL + ++ FFD V+V D +VR NRL+LL+ Sbjct: 626 FGAKLDELAPRFDDLWENRDFGGLFGLLGELRPAVDGFFDHVMVMCDAPDVRLNRLNLLK 685 Query: 687 YIKNIILIVINVQKI 701 + + + + + + Sbjct: 686 GLVDRLGRLADFNAL 700 >gi|327490528|gb|EGF22309.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1058] Length = 679 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 344/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + + + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQMRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 RAFDLDFLDIKSGRTSRGHRFLGKET-EIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ FF R++ + DR+I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQAAVLDFFRARVEKMM-DRNIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTSKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 KFNQI 676 >gi|167835498|ref|ZP_02462381.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis MSMB43] Length = 699 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 205/715 (28%), Positives = 340/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + ++ + + L +I + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLSDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + P + D Sbjct: 79 VLPVSVALDAEGKPSAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYAAPGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----RDDRIVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L E+ VL R+ AI A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHASAYADTLREKGRVLAHFAGRKEAIRTQLE--ANANGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIGTKTPSE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+Q RV R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSQLARVERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDVAIACSEHYRPRFSGDALPATPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTAYERFAAVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L L IV + + EF A+ E Sbjct: 527 AESTDAIYAFFVDRLRGLLRERGYTAGEVDAVLSLNPTRLDDIVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L ++D +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESSANGAVQPALFVEAAEKALAEQLADVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDAFFDGVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|295695443|ref|YP_003588681.1| glycyl-tRNA synthetase, beta subunit [Bacillus tusciae DSM 2912] gi|295411045|gb|ADG05537.1| glycyl-tRNA synthetase, beta subunit [Bacillus tusciae DSM 2912] Length = 695 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 198/728 (27%), Positives = 354/728 (48%), Gaps = 68/728 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI EE+PAR +A + L + + L+ +G+ + ++ Y TP RL LY L+ Sbjct: 5 FLLEIGVEELPARFVPEALDQLRVKMSEWLEAQGLAHGALQVYGTPRRLTLYAADLAERQ 64 Query: 64 PEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ + GP + A KA +GF RS G+ D +++ +G A+ R+ Sbjct: 65 EDREFQVRGPSLKAAKGPDGRWTKAAEGFARSQGVAV--DDLVERGTPQGVYVYALKREA 122 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 ++L +P + + +PK+MRW T + RP++ ++ + E+I+ Sbjct: 123 GLRTPELLAGYIPELVLGLSFPKTMRWGTGD-----VRFARPIRWLVALY-----GEEIV 172 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 ++ + G + GHR P +++ + Y+ L+ A V++D R+ I++ R A Sbjct: 173 PAEVAGVKTGRTSRGHRTLHPGQVEIPRAEAYVDVLDAAFVMVDVARRKEVIVDQVRRAA 232 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + +G + V D++LLEE++ LVEW F G+FD+ +L +P E+I LT+K NQ+ F + Sbjct: 233 AEIGGQAVIDEELLEEVVHLVEWPTAFAGAFDRDFLQVPPEVIMLTMKENQRYFPVVDGD 292 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L F+ V N + GN +V+ ARL DA F+ D+ P + + Sbjct: 293 GGLIPGFVGVRNGG-DHRLDVVRAGNEKVLRARLADAKFFYDEDRKIAPIRAMER----- 346 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDR 413 + +VF GT ++V R+R +G ++A + +V ++ Sbjct: 347 -----------------LRHIVFQEGAGTMYDKVERVRRVGLELADRLGLAPREVETMEA 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A + K DL T +V EFPEL+G +G+ YA+ E +AI EH +PR P + +P + Sbjct: 390 AGRILKFDLATHMVYEFPELEGVMGRYYALEAGEGPEAAEAILEHHRPRFPGDELPGSPA 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 +++ADK DTL + +P+GS+DPY LRR LG+++I+ +I I L + + Sbjct: 450 GTVLAVADKADTLCASFYAGIRPTGSEDPYGLRRNALGLLQILRYLEIPITLGEIFDLAE 509 Query: 534 LIL-----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 L F RL+ +L + RHDL++AIL ++ L ++ ++ Sbjct: 510 AALRASGFQDGGTWRADLDSFVTTRLRTWLLEEGRRHDLVDAILHRADEPLAVLIGRVRF 569 Query: 577 LNEFFS--SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + +AKR+ + KK ++ E P +AE+ L+ Sbjct: 570 YEGLADEGHPGLYETAEAAKRVHNLA----KKGEGLAGEPDPGRFQDDAERALHEASRLA 625 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 +Q + + D + + + FFD+V+V V+D E+R+NRL LL+ + ++ + Sbjct: 626 RRELQAARAAGDEKRALDAVGHLNRAVHPFFDRVMVLVEDEEIRENRLRLLRDVADVYNL 685 Query: 695 VINVQKIV 702 +++ +++V Sbjct: 686 LLDWRQVV 693 >gi|240117022|ref|ZP_04731084.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] gi|268602708|ref|ZP_06136875.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] gi|268586839|gb|EEZ51515.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] Length = 687 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 208/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D ++ DVY + + + +L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHDGRQ-DVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q + + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTENP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|332362956|gb|EGJ40745.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK49] Length = 679 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 212/725 (29%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGKET-EIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ +SLADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLSLADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ FF R++ + DR I D++ A+L+ + + +V+ Sbjct: 505 RLYELKFDSLSYDNQAAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + K ++P + EK L A I + Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGK-----TAVNPALFENQEEKDLAAAIEEVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAADLDQLFALSPVIDAFFDHTMVMAEDETVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|116618293|ref|YP_818664.1| glycyl-tRNA synthetase, beta subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271507|sp|Q03WY1|SYGB_LEUMM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116097140|gb|ABJ62291.1| glycyl-tRNA synthetase beta chain [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 685 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 205/730 (28%), Positives = 339/730 (46%), Gaps = 75/730 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + + Y TP RL + L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTSSENQLIERTRNFLAEHRLTVGAINPYSTPRRLAVELTDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G + + G V+L Sbjct: 61 EKSESLSEEKRGPSIERAKDANGEWTKAAMGFARGQGATPDD-----FETRDGYVWLTK- 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +D+L I + ++ + M+W+ AF ++RP++ ++ + + Sbjct: 115 HTEGVPAKDILVKIGAEVVSEMKFSTYMKWANN-----AFLYVRPIRWLVALF-----DK 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++D + ++ G +T GHRF + +++ S D Y+ LE A V+++ E R+NAI + Sbjct: 165 EVVDFHVLDVQTGRVTRGHRFLSNEHVEISSADDYVSKLESASVVVNAEVRKNAIRSQLT 224 Query: 234 RLASAVGLELVEDKD----LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A L D D LLEE+ +VEW F G+FDKKYL +P+E++ +++ +Q+ Sbjct: 225 AIAKQNNWSLELDTDAAQNLLEEVNNIVEWPTAFAGTFDKKYLEIPDEVLITSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L F+ V N + ++ GN +V+ ARLEDA F+K DQ Sbjct: 285 FFVTNHDGKLLPHFLSVRNGN-KEHLDNVIAGNEKVLVARLEDAEFFYKEDQ-------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +K + M ++ L VFH KIGT E + R VL + +AQ ++ D Sbjct: 336 ------------TKTIADYMEKVKKL--VFHEKIGTVYEHMQRTGVLAQALAQSLNFDEQ 381 Query: 410 L---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V RA + K DL T +V EF ELQG +G+ YA L EN + AI+EH P Sbjct: 382 QLSNVSRAAEIYKFDLMTGMVGEFDELQGIMGEHYAKLFGENPAVAAAIKEHYMPTSATG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + + I +++ADKLD ++ F+A + PSGS DPY LRRA GI+R + E I L Sbjct: 442 KIAESDIGAVLAVADKLDAIVTFFAADLTPSGSNDPYGLRRAATGIVRTLQEKNWHIALK 501 Query: 527 QFIED-------------QNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVD 572 + ++ F DR++ D +R DL+ A + R N +++ ++D Sbjct: 502 PVLTQFAQSQGEVAAADITAVLEFILDRVRKLTLDDGVRQDLVSAGVSRSGNTDVVYLID 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 I L + S R+ ++ + + + P +AEK LY Sbjct: 562 RINVLAAHSKDNDFRDVIESLTRVDRLAVKQLTND-----SVDPSLFENDAEKELYQATY 616 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + ++ L + PI +F+ +VN ++ V++NR + L I +I Sbjct: 617 AL--NLSHLVKEGA-DEVYTTLAGLQSPISTYFEATMVNTENAAVKNNRYAQLNVIHRLI 673 Query: 693 LIVINVQKIV 702 + ++++IV Sbjct: 674 SELGDLEQIV 683 >gi|330993190|ref|ZP_08317127.1| Glycyl-tRNA synthetase beta subunit [Gluconacetobacter sp. SXCC-1] gi|329759741|gb|EGG76248.1| Glycyl-tRNA synthetase beta subunit [Gluconacetobacter sp. SXCC-1] Length = 686 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 241/724 (33%), Positives = 370/724 (51%), Gaps = 63/724 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP+ L+E++SEEIPARMQ +AA DL +L L + ++ Y P R+ L L + Sbjct: 1 MPELLIELFSEEIPARMQARAASDLERLLCEAL--APLKPRDATAYAGPRRIALALT-VD 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR A +KA+ GF+R G++ + + ++ P Sbjct: 58 ATVPGGTVDERGPRESAPEKALAGFMRKHGVERDALVL------ENGFWVLHRTIPPVDA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 + I+P +++ PWPKSMRW SAF+W+RPL+ I+C+L K++D L Sbjct: 112 AKQIADILPGLLRRFPWPKSMRWGVG----SAFTWVRPLRRIVCLLDG-----KVVDFTL 162 Query: 181 K-------EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + N+T GHRF AP V ++ L V D RR I Sbjct: 163 AEGEDNGHGLKSANLTEGHRFTAPGAFAVTGRQDWLDGLRARQVEPDAAARRTTIAEGVA 222 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 RLA GL +V D L++E+ GL EW F+G D ++ LP E+++++++ NQ+ F R Sbjct: 223 RLAREEGLNVVADPGLIDEVAGLTEWPVPFLGQIDDAFMTLPPEVMQVSMRVNQRYFALR 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G A F V+N+ DGGA + GN RV+ AR DA HFW D+ Sbjct: 283 NADGSAAPRFAFVANLLPDDGGALTIAGNERVLRARFADARHFWDLDR------------ 330 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 ++ L R+ LD +VFHA +G+QG RV R+ L +A + ADVA +R Sbjct: 331 --------ARTLAGRVPGLDR--IVFHASLGSQGARVQRLVRLAGVLAGMTGADVAQAER 380 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A +L KADL T +V EFPELQG +G YA E + DAI H PRGP ++VPT + Sbjct: 381 AALLCKADLTTGMVGEFPELQGIMGAYYARHDGEPDAVADAIGAHYMPRGPQDDVPTAPV 440 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 S+ V+LADK+D L+ F+A+ EKP GS DPYALRRA LG+IRII EN + + L++ + D Sbjct: 441 SVAVALADKIDMLVAFFAVGEKPGGSGDPYALRRAALGVIRIIRENGLRLDLAKVLWDAA 500 Query: 534 LIL---------------FFHDRLKLYLHDRDIRHDLIEAI-LRPENDNLLTIVDLIKHL 577 L F +RL++ L RHD++ A+ + + +++ ++ + Sbjct: 501 QGLPEALRLAPDLDVLPEFIAERLRVQLRGEGARHDILAAVSVGNTDTDIVRLLARATAI 560 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + ++ G L + KR IL IE++K+ +P EK L + Sbjct: 561 ADMLATDDGRNMLAATKRAANILRIEDRKDGPHEGTPNPALYTQPEEKALADALEKTTPE 620 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 ++++ +RY + S+ ++ FF++V VN D VR NRL LL ++ + +++ + Sbjct: 621 VEQATAQERYADAMRDVASLRPVLDRFFEKVTVNDPDPAVRANRLRLLSELRRMTVLIAD 680 Query: 698 VQKI 701 +I Sbjct: 681 FSQI 684 >gi|260441366|ref|ZP_05795182.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI2] gi|291044723|ref|ZP_06570432.1| glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae DGI2] gi|291011617|gb|EFE03613.1| glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae DGI2] Length = 687 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 211/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + + + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIIHDGRQ-DVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|240079865|ref|ZP_04724408.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] gi|268596010|ref|ZP_06130177.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] gi|268549798|gb|EEZ44817.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] Length = 687 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 212/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D ++ DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIIHDGRQ-DVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 NIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAMPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|240015731|ref|ZP_04722271.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA6140] Length = 687 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 209/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D ++ DVY + R + +L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHDGRQ-DVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADI 682 >gi|125718677|ref|YP_001035810.1| glycyl-tRNA synthetase subunit beta [Streptococcus sanguinis SK36] gi|229558583|sp|A3CQ05|SYGB_STRSV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|125498594|gb|ABN45260.1| Glycyl-tRNA synthetase beta chain, putative [Streptococcus sanguinis SK36] Length = 679 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 342/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGKET-EISSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D++LL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDENLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +A+ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAKEAGLDANETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR D++ A+L+ N + +V+ Sbjct: 505 RLYGLKFDSLSYDNQEAVLDFFRARVEKMM-DRSTPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAANMDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|121998011|ref|YP_001002798.1| glycine--tRNA ligase [Halorhodospira halophila SL1] gi|121589416|gb|ABM61996.1| glycyl-tRNA synthetase beta chain [Halorhodospira halophila SL1] Length = 696 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 335/731 (45%), Gaps = 67/731 (9%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M + L+EI +EE+P + + L L+E+ + ++ + TP RL + + Sbjct: 1 MAERRPLLIEIGTEELPPKALQRLMIAFRNDLASALEEQRLQPVGVQAFATPRRLAVRFE 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 G+ ++ ERLGP+V G KA +GF RS G+ + ++ D KG + Sbjct: 61 GVDTRQADEQIERLGPKVEAAYDAAGQATKAAEGFARSCGVDVDALDSVETD--KGPRLV 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 +P E +L +V A+ ++P PK MRW + ++RP+ + +L Sbjct: 119 WRGVQPGEATETILPGLVEAALGRLPIPKRMRWGSGE-----VEFVRPVHWTVALL---- 169 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHP--IKVQSLDHYIRDLEE-AMVLLDPECRRNA 227 E++I + IP G ITYGHRFH I++ Y R LEE V+ D RR Sbjct: 170 -GEQVIPGTILGIPTGRITYGHRFHGRGRRGIEIPEPGAYERLLEEQGHVVADFVERRRR 228 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 + + A G V ++ L +E+ GLVEW G FD+++L +PEE + +++ +Q Sbjct: 229 VETGVRQEAERAGGVPVGEEALFDEVTGLVEWPVALSGDFDQRFLKIPEEALISSMQGHQ 288 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +CF R +G L FI V+NI++ D + GN RV+ RL DA FW++D+ Sbjct: 289 RCFPVRGTDGQLLARFITVANIESQDP-QQVRHGNERVIRPRLADAEFFWQQDRRLA--- 344 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 L +R+ +L VVFH +G R RI L + + I AD Sbjct: 345 -----------------LGERLEQL--RQVVFHRSLGDLHARSQRISRLAGLVTERIGAD 385 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V RA +L+K DL TE+V EFPELQG +G YA E + AI H +P + Sbjct: 386 VEAARRAGLLAKCDLVTEMVDEFPELQGIMGGHYARADGEGDAVAAAIAAHYRPAYAGDA 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P VS+AD++DTL+ +A + PS KDP+ LRRA +G++R ++E D+ L + Sbjct: 446 LPETPEGQAVSIADRIDTLVGIFAADGAPSADKDPFGLRRAAIGLLRCLIEGGHDLSLRE 505 Query: 528 FIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 F++ + + F H+RL+ Y +R ++ EA+ + L Sbjct: 506 FLDTAAGMIADECGVSTEGIAEQVAAFCHERLRGYYAERGYAAEVFEAVAAVAPSSPLDF 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + + F ++ + + KRI IL E + + E Sbjct: 566 HRRLVACSTFRERSEAQTLGEANKRIGNILRRAEVDPQTRPEAVEADGEAAERALA--EA 623 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + + +D Y L + P++ FF V+V +D VR RL LL +++ Sbjct: 624 LREAWSVAGPRIDRGEYDAALTALAELHGPVDRFFTDVMVMAEDEAVRQRRLELLGAVRH 683 Query: 691 IILIVINVQKI 701 V ++ + Sbjct: 684 AFRAVADLSHL 694 >gi|317153438|ref|YP_004121486.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio aespoeensis Aspo-2] gi|316943689|gb|ADU62740.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio aespoeensis Aspo-2] Length = 703 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 208/736 (28%), Positives = 355/736 (48%), Gaps = 70/736 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F+LEI +EE+PAR + A +L + LL E + ++ +R Y TP R+ ++ G++ Sbjct: 1 MAEFILEIGTEEMPARFVPRLAAELEQTVARLLGEAMIEHEGVRTYATPRRITAHVAGMA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ E GP G KA GF ++ G++ + +++ D KG+ Sbjct: 61 DMQRQQEETVTGPPARIAFDGDGNLTKAGQGFAKTQGVEEGALFRLETD--KGEYLAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L I +++ + +PK MRW F++ RP++ +L +L E Sbjct: 119 TVGGGRSLDILPAICVRSVESLSFPKKMRWGGYD-----FAFGRPIRWLLALL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 +++ ++ + G T GHR P P V S D Y +E E V++DPE R+ AI++ Sbjct: 169 AVVEFSVENLTAGRTTRGHRVLGPGPFAVASADRYFSVVEKECRVVIDPETRKQAIVDGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +RLA+A+G E+V + LL+E+ LVE+ + +G D +YL LP E++ +++++QK F Sbjct: 229 NRLAAALGGEIVWHEGLLDEVANLVEYPRPLIGDIDPRYLELPREVLLTSMQSHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + +G L F+ NI+ D A + +G RV+ ARLEDA FW+ D Sbjct: 289 QGPDGRLLPHFLTTLNIEPVD-IALVKKGWERVLKARLEDARFFWEADCK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 + F L K + +VVF +G+ G++ RI L +A+ + ++ Sbjct: 338 --VDFQTWLGK----------LENVVFLGPLGSVGDKSRRIGTLCAALAETLAGSKGILP 385 Query: 412 ------DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 +A LSKADL +++V EF LQGK+G YA + I E P GP Sbjct: 386 GEFEAYAQAGRLSKADLVSDMVIEFDTLQGKMGGIYAERAGKGDIVSRGIYEQYLPAGPD 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 VP++ VS+ADK DTL + + + P+G+ DPYALRR LGIIRII+E+ +D+ L Sbjct: 446 SPVPSSLSGAFVSMADKADTLAGCFGLGKAPTGANDPYALRRCALGIIRIIMEHDLDMDL 505 Query: 526 SQFIEDQNL-------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 F+ + FF RL+ + I +++A L + Sbjct: 506 ETFLTTAQEAYAKDIPWKVAREESLAKLLDFFGQRLRALFTGQGIETRVVDAALGAGFSD 565 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE-EKKNREISLEISPQYLLLEAEK 625 + T+ + L+ F E+ +L+ KR I+ + ++ +E++ P E E Sbjct: 566 IRTLKARLDALDAFSREPDFEQAVLTFKRAANIIRKQGDEAGQELTGGYDPDLFEGEHET 625 Query: 626 RLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLL 685 + + ++ + + LL + ++ FFD V+V DD VR NRL+LL Sbjct: 626 AFGTRLEENAPRFDALWENGDFAGLLGLLRELRPSVDGFFDNVMVMCDDAAVRLNRLNLL 685 Query: 686 QYIKNIILIVINVQKI 701 + + + + + + + Sbjct: 686 KALVDRLGRLADFNAL 701 >gi|91781832|ref|YP_557038.1| glycyl-tRNA synthetase subunit beta [Burkholderia xenovorans LB400] gi|91685786|gb|ABE28986.1| glycyl-tRNA synthetase beta chain [Burkholderia xenovorans LB400] Length = 699 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 208/716 (29%), Positives = 346/716 (48%), Gaps = 63/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L ++ + Y TP RL + +K + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLVEGELSFERYATPRRLAVTIKNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P + G + L + G +++D + +D K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVNDLERAQD-GKAEAFFLRYAAPGATLAE 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L++ + + ++P PK M + + ++RP ++ + E+I+ + Sbjct: 138 GLQSALDETLARLPIPKVMTYQRPDG--TNVQFVRPAHRLIAL-----HGEQIVPVSALG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 I + T GHRF + +++Q D Y L + V+ + R+ I H LA A G Sbjct: 191 IDADDTTLGHRFLSEGFVQIQHADSYAETLLHKGRVVANFSDRKETIRT--HLLAQANGD 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 QVVMPESLLDEVTSLVEWPVVYACRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ S G IV+GN RVV RL DA F+++D+ Sbjct: 309 RFLIVSNIETSTPGD-IVEGNERVVRPRLADAKFFFEQDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 K L R+ L +VV+H K+G+ +RV R+ L IA LI ADVAL RA L+KAD Sbjct: 349 -KTLADRVPLL--ANVVYHNKLGSALQRVERVEALAGAIAGLIGADVALAKRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +P V+LAD Sbjct: 406 LITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPATATGTVVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---------- 531 KL+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + + + Sbjct: 466 KLETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLPVDFVELLRNAYAQFAAVPN 525 Query: 532 -----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Q + F DRL+ L +R I+A+L L IV + + EF S A+ Sbjct: 526 VVDSTQAIYEFSMDRLRGLLRERGYAPGEIDAVLALNPTRLDDIVARLDAVREFASLAEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KRI IL +K + + L+ AEK L+A + +Q + + Sbjct: 586 ASLAAANKRISNIL---KKSEGAATGGVQVTLLVEAAEKALHAQLEQVAPRVQSQLAARD 642 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 643 YTGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRLA 698 >gi|120602312|ref|YP_966712.1| glycine--tRNA ligase [Desulfovibrio vulgaris DP4] gi|226737049|sp|A1VCW9|SYGB_DESVV RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120562541|gb|ABM28285.1| glycyl-tRNA synthetase beta chain [Desulfovibrio vulgaris DP4] Length = 696 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 206/729 (28%), Positives = 326/729 (44%), Gaps = 63/729 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+PAR +L+ L + G+ + TP R + + ++ Sbjct: 1 MSQFVLEIGTEELPARFLPALERELAERFTRALADAGIECDPVCVMSTPRRAVVRMDAVN 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E E GP KA +GF R+ G++ ++ D KG+ Sbjct: 61 PVQSESEEVVTGPPARIAFTPEGGLTKAAEGFARTQGVEVADIFRLTTD--KGEYIAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L+ I P I +P+PK MRW + F++ RP++ +L + E Sbjct: 119 HMGGARSIDLLRDICPAIIGALPFPKRMRWGSGD-----FTYARPMRWLLALF-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 ++D ++ + GNITYGHR H P+ V Y R + E V E RRNA++ Sbjct: 169 SVVDFEVGGVRSGNITYGHRIHGAGPLTVAHAGDYERVIREQGGVTPVGEERRNAVVTGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA+A G +++ LL+E+ GLVE +G+ D +L LP E++ +++++QK F Sbjct: 229 NTLATAAGGKVIWKDSLLDEVQGLVEHPVPCLGNIDPSFLELPREVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L F+ V N+ D G + +G RV+ ARLEDA FWK D Sbjct: 289 EDAEGRLMPHFLTVLNLTPLD-GDLVRKGWERVLRARLEDARFFWKTD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 L+ D +A LD +V+F +G+ G++ R+ L +A + D Sbjct: 336 --------LASSFDAWLASLD--NVIFLGPLGSMGDKTRRLEQLCAWLASEVGFDDATAA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSK DL + +V EF LQG +G YA E + AI E P GP VP++ Sbjct: 386 ARAGRLSKGDLVSGMVGEFDTLQGIMGGIYARRMGEAEAVAAAIAEQYLPAGPDSPVPSS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ADK DTL + + P+G+ DPYALRR LGI RIILE+ + + + Sbjct: 446 MCGALLSIADKADTLAGCFGLGMIPTGAADPYALRRCVLGIARIILEHGLQLDVRGLFAK 505 Query: 532 QNLI------------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + FF RL+ L+EA+L D++ + Sbjct: 506 AFALYGERAWKLAPEDALVKLDEFFMARLRNLFIANGYETLLVEAVLAAGCDDVRSAGAR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVIS 632 ++ L F +L+ KR I+ + + + L+ +AE+ L A + Sbjct: 566 LEALAAFSRRDDFASAVLTFKRAANIIRKQGGDSDVALDGAWKADLLVEDAERHLAASLE 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 Y + LL + ++ FF+ V+V DD +R NRL+LLQ + + Sbjct: 626 AMFPRFDGLWAEGDYPALFGLLGELRPVVDGFFEGVMVMSDDAALRTNRLNLLQALVGRL 685 Query: 693 LIVINVQKI 701 + + + Sbjct: 686 SRLADFGAL 694 >gi|254492884|ref|ZP_05106055.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 1291] gi|226511924|gb|EEH61269.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 1291] Length = 687 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 211/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D ++ DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHDGRQ-DVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAMPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|74318365|ref|YP_316105.1| glycyl-tRNA synthetase subunit beta [Thiobacillus denitrificans ATCC 25259] gi|123731722|sp|Q3SGF0|SYGB_THIDA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|74057860|gb|AAZ98300.1| glycyl-tRNA synthetase, beta subunit [Thiobacillus denitrificans ATCC 25259] Length = 701 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 201/736 (27%), Positives = 353/736 (47%), Gaps = 74/736 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGL 59 + L+E++ EE+P + K E + L L +G+++ + +P RL +++ + Sbjct: 4 ANLLVELFVEELPPKALKKLGEAFAAALTESLVAQGLVHAQAAVTHFASPRRLGAHIENV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLA 111 S +K + +L P G A+ L + G + ++++ K + Sbjct: 64 LERSADKPVSTKLMPVSVGLDADGNATPALLKRLAALGADASAVATLRRESDGKAEALFM 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + L + ++ K+P PK M + S +++RP+ ++ + + Sbjct: 124 DSVAKGISLGLGLAKALWESLDKLPIPKVMSYQLADG-WSTVNFVRPVHGLVALHGTDP- 181 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 +D+ + + G T+GHRF A PI ++ D Y + LE E V+ + RR I+ Sbjct: 182 ----VDVRMFGLTAGRKTHGHRFEAAADPIVLKDADSYAQQLESEGAVIANFAERRAEIV 237 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A+ +GL VED+ LL+E+ LVE V +G F++ +L +P+E + LT+K NQK Sbjct: 238 RQLEAAAAPLGLVPVEDEALLDEVTALVERPNVLLGQFEQAFLEVPQECLILTMKANQKY 297 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L N F++VSNI +D +A+V GN RVV RL DA F+ +D+ Sbjct: 298 FPLLDAAGKLTNKFLIVSNISPADA-SAVVGGNERVVRPRLADAKFFFDQDRK------- 349 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K LD R+ L + VV+H K+GTQGERV+R++ + + I + + + Sbjct: 350 -------------KTLDARV--LGLAKVVYHNKLGTQGERVTRVQAVARAIGEKLGGE-- 392 Query: 410 LVDRAIVLSKADLC---------TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + KAD T++V EFPELQG +G+ YA AIE+H + Sbjct: 393 -----ALALKADQAALLAKADLLTDMVGEFPELQGVMGRYYAQHDGVADDVAFAIEDHYR 447 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR +++P N + + V+LADKL+TL+ + I EKP+G KDP+ALRR LG++R+++E Sbjct: 448 PRFAGDDLPRNPVGVCVALADKLETLVGLFGIGEKPTGDKDPFALRRHALGVVRMLIEKH 507 Query: 521 IDIPLSQF--------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 + I L++ ++ LF +RL + ++ + ++A+L Sbjct: 508 LPIGLNELVSIAFSAFQQGLLGQAHTDVYLFMFERLSGAMREQGYSANEVDAVLSLNPIR 567 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + + ++ + F + + + KR+ IL +K E+ P + AE+ Sbjct: 568 IDLVPQQLEAVRAFAALPEAAALAAANKRVGNIL---KKAEGEVGASADPGRFVEAAERA 624 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+A + + + Y L ++ P++ FFDQV+VN DD +R NRL+LL Sbjct: 625 LFAALDEVAPRAAAAFGSGDYTASLQALAALKAPVDAFFDQVMVNADDPALRANRLALLN 684 Query: 687 YIKNIILIVINVQKIV 702 + + V ++ ++ Sbjct: 685 QLHRTMNRVADISRLA 700 >gi|269798037|ref|YP_003311937.1| glycyl-tRNA synthetase subunit beta [Veillonella parvula DSM 2008] gi|269094666|gb|ACZ24657.1| glycyl-tRNA synthetase, beta subunit [Veillonella parvula DSM 2008] Length = 683 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 198/728 (27%), Positives = 331/728 (45%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + S E E GP G KA GF R GL + +D A Sbjct: 61 ADTSAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKSM W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVTEMLPQLITGLNFPKSMHWGNLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E +I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EDVIPVEFATVQSGNVTRGHRFLGADEITIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDMAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQDGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV- 411 KPL R L +VF +G ++ R+ LG+ + V Sbjct: 334 ----------KPLIDRQDGL--TKIVFQEGLGNLADKTERLLKLGRVFGEECGLHEDTVV 381 Query: 412 --DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRFAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L Sbjct: 442 QTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPIF 501 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +L FF RLK DR++ H +I+ +L ++ L Sbjct: 502 KASMELLNVPAEKQEELLGQVEEFFTLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + + + + R++ ++ E ++ L +AEK L+ S Sbjct: 562 VNALLA-NRIDENVELVQAYTRMYNLVKDVEYTG------VNSDLLKEDAEKELFEAASK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASSAAWEAGDYDAVVAVPATLVPAINKFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISSL 682 >gi|257469009|ref|ZP_05633103.1| glycyl-tRNA synthetase beta chain [Fusobacterium ulcerans ATCC 49185] gi|317063256|ref|ZP_07927741.1| glycyl-tRNA synthetase subunit beta [Fusobacterium ulcerans ATCC 49185] gi|313688932|gb|EFS25767.1| glycyl-tRNA synthetase subunit beta [Fusobacterium ulcerans ATCC 49185] Length = 690 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 187/728 (25%), Positives = 344/728 (47%), Gaps = 73/728 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE+PAR ++A +DL L LK+ + +++++ Y TP RL L + L Sbjct: 3 LLFEIGMEELPARFLNQALKDLKNNLEAKLKDGRISFKDIKTYGTPRRLVLDVHELGEQQ 62 Query: 64 PEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +GP +A GF +S G++ D +I P KG+ A Sbjct: 63 EDLNIVNMGPAKNVAYGSNGEISRAGLGFAKSQGIEA-EDLEIVSTP-KGEYIAARKFMK 120 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +++L I+ + ++ + KSM WS + RP++ L + +++ Sbjct: 121 GKETKELLPEILKSLVLELNFQKSMTWSDKK-----LRFARPVQWFLAL-----CDNEVV 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +++ + GN + GHRF +V ++D Y + E V++D E R+ I + Sbjct: 171 KFEIEGMESGNKSRGHRFFGKE-FEVNTIDEYFEKIRENNVIIDIEERKALIKKLINENC 229 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G +++ + +LL+E+ L+E+ +GSF+ +L +P+E++ ++++ +Q+ F Sbjct: 230 TNSGEQVLVEDELLDEVTNLIEYPCPIVGSFNSDFLEVPQEVLIISMEVHQRYFPILDSN 289 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L F++V N + + +GN +V++ARL DA F++ D Sbjct: 290 GKLLPKFVVVRNGV--ETSEQVRKGNEKVLSARLADARFFYQED---------------- 331 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PL + +L VVF +GT ++ R + K + + + + R Sbjct: 332 ----LKSPLADNIEKLKT--VVFQKDLGTIYSKIERATEIAKYLIDTLGYNDRKDSILRT 385 Query: 415 IVLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 ++L+KADL + ++ E F +LQG +G +YA+ E I+EH PR +N+PT Sbjct: 386 VLLAKADLVSNMIGEKEFTKLQGFMGADYALKSGEGEKVSLGIKEHYYPRFQGDNLPTEL 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 I ++D+LDTL+ + + PSGSKDP+ALRRA LGI+ +IL + +DI L E Sbjct: 446 EGIVAGISDRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNVILNSGLDISLKALTEKA 505 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ FF R + D++ A+L +DN + ++ Sbjct: 506 LDALQGCGVLKRDRETVLAEVLEFFKQREMNIFTEMKYSKDIVTAVLNTNSDNAVEALEK 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 IK L F E L KR+ I EK I+ E LY + Sbjct: 566 IKTLEAFAKEEAFETLLPVLKRVGNISKDHEKGI------INQDLFKEPVETELYNFSLE 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + +++++K Y++ + S + I +F++V+V D +V++NRLS L+++ ++ + Sbjct: 620 LNSKVIDALNNKDYNRYLQAIVSGKDIINRYFNEVMVMDKDEDVKNNRLSQLKFLADLFI 679 Query: 694 IVINVQKI 701 + ++ +I Sbjct: 680 KMADLNQI 687 >gi|240122659|ref|ZP_04735615.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] gi|268681258|ref|ZP_06148120.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] gi|268621542|gb|EEZ53942.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] Length = 687 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 211/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIIHDGRQ-DVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q + + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTENP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + +L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRSLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|300692465|ref|YP_003753460.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum PSI07] gi|299079525|emb|CBJ52203.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum PSI07] Length = 719 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 209/719 (29%), Positives = 349/719 (48%), Gaps = 66/719 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 36 PPKALARLGETFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAASIAGVRRAAPDRELREK 95 Query: 71 LGP----------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P K + +S G+ I+ +++ P K + + Sbjct: 96 VLPVNIAFDADGKPAAPLTKKLAALAKSIGVDAIAPESLERAPDGKAESLFYRYTARGAV 155 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + + ++RP + +L +++I Sbjct: 156 LADGLQAALSQTIAGLPIPKVMTYQRPNG--DSVQFVRPAHRLTALL-----DDEVIPAS 208 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ + V+ R+ AI + + A A Sbjct: 209 VLGLQSGNVTLGHRFLSAGEIVIPHATAYAGTLQSQGKVIASYAERKEAIRAELQKAAGA 268 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ FD+ +L +P+E + LT++TNQK F +G Sbjct: 269 D--TVVMPEALLDEVNSLVEWPVVYPCHFDEPFLAVPQECLILTMQTNQKYFALTDAQGH 326 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSNI GA I++GN RVV RL DA F++ D+ Sbjct: 327 LRNRFLIVSNIATGTPGA-IIEGNERVVRPRLADARFFFEHDKK---------------- 369 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ +L VV+H KIGTQ ERVSR++ + ++A+ + ADVA RA +L+ Sbjct: 370 ----KPLADRVPQLSR--VVYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRAALLA 423 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P+ V+ Sbjct: 424 KADLLTDMVGEFPELQGTMGTYYARHDGEPEDVALACSEHYQPRFAGDALPSTATGTVVA 483 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ +E Sbjct: 484 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGVAEVLEVAAASFEG 543 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 544 IAAVKPDLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 603 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 604 PQAEALAAANKRITNIL----KKTDIAIGAVQPQLLREDAERALHQAVATSEPHVHDAFA 659 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 660 RGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 718 >gi|157150548|ref|YP_001449885.1| glycyl-tRNA synthetase subunit beta [Streptococcus gordonii str. Challis substr. CH1] gi|229558577|sp|A8AVS5|SYGB_STRGC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157075342|gb|ABV10025.1| glycyl-tRNA synthetase, beta subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 679 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I++ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVIASPLERGDMIVDQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L+ +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLN--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ + + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENKEEKDLAAAIEKV-- 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 617 -----VLTSDLAANLDQFFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQIA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|332366390|gb|EGJ44141.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK355] Length = 679 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLSFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGKET-EIVSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L+ +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLN--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ + + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E A + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEANFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 TA-------DLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|325129468|gb|EGC52298.1| glycyl-tRNA synthetase, beta subunit [Neisseria meningitidis OX99.30304] Length = 687 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 209/707 (29%), Positives = 350/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAAAVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L+ Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIVHD-GKQDVYAYEYVQTGKPLGELLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 N T G RF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 SNQTLGPRFLSNGEITIENADSYAEQMRGQGKVVASFAERKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVE+ V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEYPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q +D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTADP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK L+A I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALFAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|293397822|ref|ZP_06642028.1| glycyl-tRNA synthetase, beta subunit [Neisseria gonorrhoeae F62] gi|291611768|gb|EFF40837.1| glycyl-tRNA synthetase, beta subunit [Neisseria gonorrhoeae F62] Length = 687 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 211/707 (29%), Positives = 351/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D ++ DVY + + + +L+ Sbjct: 76 GPAVANAVKDGAPTKALEGFARGAGAK-IEDLTIVHDGRQ-DVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P++ + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQKCLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|323350338|ref|ZP_08086003.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis VMC66] gi|322123523|gb|EFX95194.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis VMC66] Length = 679 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLATNLDQLFALSPIIDAFFDHTMVMAEDETVRNNRLALLTSLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|91774999|ref|YP_544755.1| glycine--tRNA ligase [Methylobacillus flagellatus KT] gi|122985601|sp|Q1H3M3|SYGB_METFK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91708986|gb|ABE48914.1| glycyl-tRNA synthetase beta chain [Methylobacillus flagellatus KT] Length = 708 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 210/739 (28%), Positives = 361/739 (48%), Gaps = 69/739 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI----------YQNMRQYWTPH 50 M + L+E++ EE+P + + + L + +I + + +P Sbjct: 1 MSNLLVELFVEELPPKALQNIGISFADQIYHSLVTQDLIEPPSELDAANPSPWKWFASPR 60 Query: 51 RLFLYLKGLSPHSPEKIE-ERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD- 102 R+ ++++ ++ +P+K ++L P G A+ L + G + Q+K++ Sbjct: 61 RIAVWIRNVTQKAPDKQLAQKLMPASVGLDADGNATPALLKKLAALGADESAVSQLKREH 120 Query: 103 PKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSI 162 K +V L + + L+ + AI K+P PK M + S +++RP + Sbjct: 121 DGKAEVLLLDRTVRGATLAEGLQKALDEAIAKLPIPKVMTYQLEDG-WSNVNFVRPAHGL 179 Query: 163 LCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEE-AMVLLD 220 + + +++ + + GN T GHRF A PI +++ D Y L++ V+ Sbjct: 180 VAL-----HGNEVVPIRALGLTAGNRTQGHRFEATQSPIVLRNADSYAEQLQQDGAVIPG 234 Query: 221 PECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 + RR+ I A + L +ED+ LLEE+ LVE V +G F++ +L +P+E + Sbjct: 235 FKERRDEIARQLEAAAGKLKLRPIEDEALLEEVTALVERPNVLVGQFEQAFLAVPQECLI 294 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 LT+K NQK F +G L N F++VSNI +D +A+V GN RVV RL DA F+++D Sbjct: 295 LTMKANQKYFPLLDAQGRLTNKFLIVSNISPADP-SAVVGGNERVVRPRLADAKFFFEQD 353 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + K L+ R+ L VV+H K+G+QGER++R+ + + Sbjct: 354 RK--------------------KTLESRIPGLS--KVVYHNKLGSQGERIARVSEIANLV 391 Query: 401 AQLID--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 + A +A L+KADL T++V EFPELQG +G+ YA + + AIE+H Sbjct: 392 GTALGDQTLAAQASQAAQLAKADLVTDMVGEFPELQGIMGRYYAQHEGLSDDIAYAIEDH 451 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 +PR + +P NK+ + V+LADKL+TL ++I EKP+G KDP+ALRR +GI+RI+ E Sbjct: 452 YRPRFSGDALPRNKVGMIVALADKLETLAGLFSIGEKPTGEKDPFALRRHAIGILRILTE 511 Query: 519 NKIDIPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + +PL+ +E Q + F DRL L D+ ++A+L + Sbjct: 512 GGLSLPLNTLLEQTLSVFQHEFDHDTALQAVEEFIFDRLSGSLRDQGYSVQEVDAVLAMK 571 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L I ++ + F S + + KR+ IL +K + I I+P L +A Sbjct: 572 PQLLGDITKRLEAVRAFASLPEAASLAAANKRVGNIL---KKSDSAIEAAINPALLQEDA 628 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L ++ Q++ Y L ++ P++ FFD V+VN +D ++ NRL+ Sbjct: 629 EKTLAQALAQVQPQAQQAFAAGDYTGSLKALAALKAPVDAFFDHVMVNAEDPALKTNRLA 688 Query: 684 LLQYIKNIILIVINVQKIV 702 LL + + V ++ ++ Sbjct: 689 LLATLHQAMNQVADLSRLA 707 >gi|241759537|ref|ZP_04757640.1| glycyl-tRNA synthetase, beta subunit [Neisseria flavescens SK114] gi|241320094|gb|EER56455.1| glycyl-tRNA synthetase, beta subunit [Neisseria flavescens SK114] Length = 687 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 213/707 (30%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLIDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V GA KA++GF R G + I D I D K DVY + + + ++L Sbjct: 76 GPAVANAMKDGAPTKALEGFARGAGAK-IEDLTIIND-GKQDVYAYEYVQTGKPLGELLV 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + ++ I+++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGSD-----IVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + E V R+ AI + A + + Sbjct: 184 GNKTLGHRFLSSGEIAIENADSYAAQMREQGKVEASFAERKAAIQTALNEQAGRLKATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I+QGN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIQGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L VV+H KIG+Q ER+ R++ + A+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKLS--SVVYHNKIGSQAERIERLQSIAAHTAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR +N+P K++ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLNGETEEIAEAIEQHYQPRFAGDNLPNGKVATAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRR+ LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRSALGILRMLMQYGLDVNELIQTAFNSFPKGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L +V ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDVVAKLQAVAAFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALYAAAQGLQPKISAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|299822896|ref|ZP_07054782.1| glycyl-tRNA synthetase beta subunit [Listeria grayi DSM 20601] gi|299816425|gb|EFI83663.1| glycyl-tRNA synthetase beta subunit [Listeria grayi DSM 20601] Length = 689 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 217/727 (29%), Positives = 346/727 (47%), Gaps = 77/727 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + L E + Y+N+ Y TP RL L +K + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVRQLKERVADWLLENKISYENIETYATPRRLALIVKAM 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++IEE GP G KA GF RS + ++ KG YL V Sbjct: 61 ADKQEDRIEEAKGPAKKIALDENGDWSKAALGFARSQ---QVDPSELGFQAFKGVDYLFV 117 Query: 113 LRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ P + +L I I + +P SM W + +IRP+K ++ + + Sbjct: 118 KKEVPGQPTISLLPEI-KACITAMNFPVSMHWGSNE-----MRFIRPIKWLIALFDKD-- 169 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +I ++ + G +T GHRF ++ Y L E V+ + E R+ AI Sbjct: 170 ---VIPFEIAGVSTGKVTRGHRFLGKEA-EINEPSEYTARLLEQFVVANSEERKAAIREQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 H + ++ D+ LLEE+ LVE+ V G F++KYL LPEE++ T+K +Q+ F Sbjct: 226 LHEIELVENWKIEIDETLLEEVNNLVEYPTVLTGDFEEKYLTLPEEILITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +++G L FI V N + + +GN +V+ ARL DA F+ D Sbjct: 286 AFSQDGTLLPHFITVRNGN-EEHLEIVAKGNEKVLRARLSDAEFFYLDD----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 L + +D +A+L ++VFH K+GT E++ R+ + +A + Sbjct: 334 ---------LKQSIDDCVAKL--RNIVFHEKLGTLTEKMKRVEKVASLLADQLALSTEKK 382 Query: 412 DRAIVLS---KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 D+ I L+ K DL T IV EFPELQG +G++YA+LQ E AI EH P + Sbjct: 383 DKLIHLAAIYKFDLVTHIVDEFPELQGLMGEKYALLQGEEADVAAAIREHYLPISAEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P ++ +++ADKL+TLI F+A+ P+GS+DP++LRR LGI+RI+ NK +I L Sbjct: 443 PQTELGSILAIADKLETLIAFFAVGIVPTGSQDPFSLRRNALGIMRIMKANKWNIRLLPL 502 Query: 529 IE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 I Q +I F RLK + IR+D+I+A+L DN+ Sbjct: 503 IREVIKIEQAELDQSLSVEELQQEIIQFLKQRLKAIMLGEAIRYDIIDAVLDSTQDNVPE 562 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +++ LN + + F + + + +++ + +K +E+ I P + EK L+ Sbjct: 563 LLERASVLNNYST--DSGNFRETIESLSRVVNLAKKHEKEV--VIDPALFENQEEKTLFE 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + Q R + L ++ IE +FD++LV D VR+NRL LL + Sbjct: 619 ALESLKQNFQSLPVAAR----LESLIALKPAIEAYFDKILVMSGDDAVRNNRLELLFELS 674 Query: 690 NIILIVI 696 N I Sbjct: 675 NFIKEFA 681 >gi|319651590|ref|ZP_08005717.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. 2_A_57_CT2] gi|317396657|gb|EFV77368.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. 2_A_57_CT2] Length = 690 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 351/731 (48%), Gaps = 76/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D LLEI EE+PAR + LS + L E+ + + + + +P RL + + G+ Sbjct: 4 KDLLLEIGLEEMPARFVTNSMNQLSDKVNSWLLEKKISFDEISAFSSPRRLAVLVTGVDT 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + EE GP G KA GF R G I G Y V + Sbjct: 64 AQEDINEEAKGPAKKIALTEDGEWSKAAVGFSRGQGASVED---IFFKEINGVEYAHVSK 120 Query: 115 -KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L + + + +PK+MRW+ +IRP+K ++ + Sbjct: 121 FIKGKETAALLPE-LQQIVTSLSFPKNMRWANQE-----LRFIRPIKWLMALF-----GN 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I + + N+T GHRF I++ + Y + L V+ +P+ R++AIL+ Sbjct: 170 EVIPFAITNVHTSNLTRGHRFLGEE-IEINNPSDYEKSLLAQYVITNPQERKSAILSQLQ 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++ + D+DLLEE+ LVE+ G F+++YL LPEE++ ++K +Q+ F + Sbjct: 229 KIEEENDWVIPVDEDLLEEVNNLVEYPTALYGQFEEEYLELPEEVLITSMKEHQRYFPVK 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++EG L F+ V N + + + +GN +V+ ARL DA F++ DQ Sbjct: 289 SKEGRLLPYFVTVRNG-SHEHLEKVAKGNEKVLRARLSDAAFFYREDQK----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 D++ L+ + ++V+H +IGT E+V R+R L +++ + D A+ Sbjct: 337 -----TDIAASLE------KLKNIVYHEEIGTLAEKVERVRQLAANLSENLHFSDEAKAV 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 DRA +SK DL + +V EFPELQG +G++YA+ + E + AI EH PR + P Sbjct: 386 TDRAAEISKFDLVSHMVYEFPELQGFMGEKYALQKGEKEAVARAINEHYMPRNAEDQTPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +S+A+KLDT+++ +AI PSGS+DPYALRR G+I+ +L D+ L + I Sbjct: 446 SDAGAVLSIAEKLDTIVSSFAIGIIPSGSQDPYALRRQATGVIQTLLAKNWDLKLEELIA 505 Query: 531 -------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 Q L+ FF R+K L ++ +R+DLIEA+L E ++ ++V Sbjct: 506 LSSETVLNSKIGKKSKGELMQELVSFFKLRIKYMLQEKTVRYDLIEAVLGSEIGSVPSLV 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L +A ++ + + R+ I + E K +I EK L+ Sbjct: 566 KRAEVLESHKDAAGFKESIEALSRVINIASKAEDKG-----DIDSSLFENVYEKSLFNKY 620 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 +++ + + +LL S+ I+ +F+ +V + +E+R NRL + + ++ Sbjct: 621 LSVNEELRKEVAEE---AAFNLLISLKPEIDQYFEHTMVMDEKQEIRSNRLHQMANLADL 677 Query: 692 ILIVINVQKIV 702 I N+ +I+ Sbjct: 678 IKKFANMNEII 688 >gi|264680350|ref|YP_003280260.1| glycyl-tRNA synthetase subunit beta [Comamonas testosteroni CNB-2] gi|262210866|gb|ACY34964.1| glycyl-tRNA synthetase, beta subunit [Comamonas testosteroni CNB-2] Length = 704 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 207/731 (28%), Positives = 359/731 (49%), Gaps = 61/731 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKG 58 + L+E++ EE+P + K + + ++ LK +G++ + + Y +P RL ++ Sbjct: 4 SNLLVELFVEELPPKALQKLGDAFAAVIFEQLKAQGLLASSESRLTAYASPRRLAAHITE 63 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYL 110 + P + +K + ++L P G A+ L + G + +K+ K + Sbjct: 64 VLPQAEDKAVSQKLMPVSVALDAEGKPTAALLKKLAALGADESAVAALKRQGEGKAEALF 123 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 L+ D ++ + A+ K+P PK MR+ ++ ++RP ++ + + Sbjct: 124 YESTAKGVLLTDGVQKALDEALAKLPIPKVMRYQLQDG-WTSVHFVRPAHGLVVMHGTQV 182 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRRNAI 228 +I + + G T+GHRF A P+ +Q+ D Y L EE V+ RR I Sbjct: 183 ----LIGVKALGLTAGAATHGHRFEAAVDPVVIQNADSYAEQLREEGAVIASFTERRADI 238 Query: 229 LNDAHRLASAVGLEL--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 A +G ++ ++D LL+E+ LVE V + F+K++L +P+E + LT+K N Sbjct: 239 ARQLQAAAERIGGDVRPIDDPALLDEVTALVERPNVLVCEFEKEFLAVPQECLILTMKAN 298 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L + F++VSNIQ D +A+V GN RVV RL DA F+ +D+ Sbjct: 299 QKYFPLLDANGKLTHQFLIVSNIQPQDA-SAVVGGNERVVRPRLADAKFFFDQDRK---- 353 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA 406 K L R+ +LD VV+H K+GTQGER++R+R + K IAQ + Sbjct: 354 ----------------KTLASRVEQLD--KVVYHNKLGTQGERIARVRAIAKSIAQQLGN 395 Query: 407 DV--ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 L D+A +L+K DL T++V EFPELQG +G+ YA +++ DAIE+H KPR Sbjct: 396 SELGRLADQAAMLAKTDLVTDMVGEFPELQGIMGRYYAQNDGLDVAVADAIEDHYKPRFA 455 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK---- 520 + +P + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E Sbjct: 456 GDELPRGDVGVIVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLVEKDLELD 515 Query: 521 --------IDIPLSQFIEDQ-NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + + L+ F +DRL ++ +EA+L + L + Sbjct: 516 LETLLVSTLPAFGDKIQDATPQLVEFIYDRLANMFREQGYSAQEVEAVLALQPQRLSDVQ 575 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL +K ++ ++ L+ +AEK LYAV+ Sbjct: 576 KRLEAVRAFATLPEAPALAAANKRVGNIL---KKAETDVQPQVKEALLVEQAEKELYAVL 632 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q+ Y L ++ ++ FF+QV+VN +D ++ NRL LL Sbjct: 633 QQVAPKAQQQFAAGDYTASLQTLAALRASVDAFFEQVMVNAEDPVLKANRLGLLMLQHEA 692 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 693 MNKVADLARLA 703 >gi|209519016|ref|ZP_03267824.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. H160] gi|209500528|gb|EEA00576.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. H160] Length = 699 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 210/716 (29%), Positives = 340/716 (47%), Gaps = 63/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + + + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGEPSFERYATPRRLAVTIHNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P + G + L + G T++D + +D K + + P + D Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFTVNDLERAQD-GKAEAFFLRYAAPGATLAD 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L+ + + K+P P M + S+ ++RP + + E+II + + Sbjct: 138 GLQAALDETLPKLPIPTPMTYQRPDG--SSVQFVRPAHRLTAL-----HGEEIIPVSVLG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGL 241 I + T GHRF + +++Q Y LE V+ R+ AI + LA A Sbjct: 191 IDADDTTLGHRFLSEGFVQIQHAQSYAETLEHRGRVIASFAKRKEAIRSQL--LAHAGED 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++V + LLEE+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 KVVMPEALLEEVTSLVEWPVVYECRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ + IV+GN RVV RL DA F+ +D + Sbjct: 309 RFLIVSNIETATPVE-IVEGNERVVRPRLADAKFFFTQD--------------------M 347 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 KPL +R+ L +VV+H K+G+ +RV R+ L IA L DVAL RA L+KAD Sbjct: 348 KKPLAERVPLL--ANVVYHNKLGSALQRVERLEGLAGAIAALTGGDVALATRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +PT V+LAD Sbjct: 406 LITDMVGEFPELQGTMGTYYARHDGEQEEVALACSEHYQPRFSGDALPTTATGTIVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--------- 532 KL+TL+ W I +P+G KDP+ALRR LG++RI++E ++++ + + Sbjct: 466 KLETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLNVDFVELLRVAYAQFAGVPN 525 Query: 533 ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + F DRL+ L +R I+A+L L IV + + EF S A+ Sbjct: 526 VADSTDAIYEFSMDRLRGLLRERGYAAGEIDAVLALNPTRLDDIVARLDAVREFASLAEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + KRI IL +K + + P AEK L A + +Q + + Sbjct: 586 ESLAAANKRISNIL---KKSEGVTNGGVQPALFTEAAEKALNAQLEQVTPRVQSQLAVRD 642 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 643 YTGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISRLA 698 >gi|324991739|gb|EGC23671.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK353] Length = 679 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 212/725 (29%), Positives = 342/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L E + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTEHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDAGGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTDFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLA 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYENQEAVLDFFRARIEKMM-DRSIPKDIVTAVLQSNNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+P + EK L I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINPSLFENQEEKDLATAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLATNLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|240114820|ref|ZP_04728882.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] gi|268600476|ref|ZP_06134643.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] gi|268584607|gb|EEZ49283.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] Length = 687 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 208/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIIHDGRQ-DVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFQTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADI 682 >gi|194100114|ref|YP_002003254.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae NCCP11945] gi|238690173|sp|B4RJG3|SYGB_NEIG2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|193935404|gb|ACF31228.1| glycyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae NCCP11945] Length = 687 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 211/707 (29%), Positives = 348/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIIHDGRQ-DVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAMPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|324994104|gb|EGC26018.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK678] Length = 679 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 344/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDRMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEAEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + + +L+ +V FH KIG+ E + R + +AQ D Sbjct: 338 -----------IADLVEKLN--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETVD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ + + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVIAVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|237756328|ref|ZP_04584880.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] gi|237691514|gb|EEP60570.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] Length = 678 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 200/717 (27%), Positives = 347/717 (48%), Gaps = 56/717 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKG 58 M +LLEI EE+P + E L + K+ + +N++ Y TP RL + +K Sbjct: 1 MKSYLLEIGCEELPPKAILTYKEFLKEYVSQTFKDFFIYNSPENIKIYVTPRRLAVLIKN 60 Query: 59 LSPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L + +GP KA F + +I + KG+ A Sbjct: 61 LKERQDNQKITLIGPPYKVAIDSEGKFTKAALSFAEKNNIPLEKLEKITTE--KGEYLGA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + K +E +K P + P KSM+W+ + + + RP++ I+ +L Sbjct: 119 TIEKEGESLESFIKHNTPQLFNQFPQLKSMKWNDSD-----YRFPRPIRWIVSLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 +K+ID ++ + TY HRF + + Y + ++ + E R++ Sbjct: 169 DDKVIDFEVASVKADRFTYLHRFMTKPIGRGERKDINHANDYEEITKLGYIIANFEDRKH 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 +I A + ++ED +L++EI L E+ +G +YL LP+E I K + Sbjct: 229 SIKTQYEGFARQLNASIIEDDELIDEITCLTEFPVGIVGDLSPEYLTLPKEAIITVCKHH 288 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ + ++G L F+ SN D + G +V+ ARLEDAL F+K D Sbjct: 289 QRY-LNFEKDGKLIPKFLAFSNNAVKD-RDVVKNGYEKVLRARLEDALFFYKED------ 340 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID- 405 L K LD + +L + FH K+G+ ++V R L K+A LI Sbjct: 341 --------------LKKKLDDNIEKLK--GIQFHEKLGSMYDKVLRNLELALKLADLIGY 384 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 DV + RA++LSKADL TE+V+EF ELQG +G Y+ Q E +I EH P+ Sbjct: 385 KDVEKIKRAVMLSKADLLTEMVKEFDELQGIMGMYYSQKQGEEEEISRSIYEHYLPKTAE 444 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +N+P + ++LADKLDT+I+F I E P S DP+ +RR +GI+R+++E +ID+ L Sbjct: 445 DNIPETNLGTLLALADKLDTVISFIKIGELPKPSADPFGIRRNAIGIVRLLVEKEIDLDL 504 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + I+D++++ F RL+ YL + + D+I A+L ++ N+ +K L++ + Sbjct: 505 RKVIDDESILDFILSRLESYLQSKGYKTDIINAVLSLKDGNIYRNYLKVKALSQLRNLPD 564 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E ++ KR+ I+ + + S + L+ E EK LY + ++ +++K Sbjct: 565 YENVIMVFKRVGNIIPEDFR-----SSNVDVNLLVSEPEKELYKKFIEIKDKFKQFIENK 619 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + L+ + I+ FFD V++ V+D ++++NRLSLL+ I ++ + + K++ Sbjct: 620 DYDKALGLMLELKPYIDRFFDNVMIMVEDEKLKNNRLSLLKEINDLFRNIADFTKLI 676 >gi|332358027|gb|EGJ35860.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1056] Length = 679 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEVGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQSVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ ++L+ + + +V+ Sbjct: 505 RLYELKFDSLSYENQEAVLDFFRARVEKMM-DRSIPKDIVTSVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEKV-- 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 617 ELTPDLAAN-----LDQLFALSPVIDAFFDHTMVMDEDEAVRNNRLALLASLTAKAGQMA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|319939735|ref|ZP_08014092.1| glycyl-tRNA synthetase beta subunit [Streptococcus anginosus 1_2_62CV] gi|319811073|gb|EFW07384.1| glycyl-tRNA synthetase beta subunit [Streptococcus anginosus 1_2_62CV] Length = 679 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 199/724 (27%), Positives = 336/724 (46%), Gaps = 74/724 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + + + + TP RL + + LS Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKIAAFLTDNRLTFDKIEMFSTPRRLAVRVSNLSE 62 Query: 62 HSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP KA GF+R GL I KG+ Y+ V + Sbjct: 63 KQTDLTEDFKGPSKKIALDADGHFTKAAQGFVRGKGLTVED---ITFREVKGEEYVYVTK 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + L V + + +P +M W T F +IRP+ ++ +L E Sbjct: 120 QEIGKPVEELIDGVADVLTSLSFPVNMHWGTN-----TFEYIRPVHTLTVLLDDESFL-- 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++L +I G + GHRF H +K+QS D Y DL + V+ P R N IL+ Sbjct: 173 ---MNLFDIESGRTSRGHRFLG-HEVKIQSADSYEEDLRKVFVIASPMERENMILDQIKE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + + D+DLL+E++ L+E+ F+G FD++YL +PEE++ ++K NQ+ FV R Sbjct: 229 IEKMHNVHVEIDEDLLDEVLNLIEYPTAFIGRFDERYLDVPEEVLVTSMKVNQRYFVVRN 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L F+ + N A + +V+GN +V+ ARLEDA FW+ DQ + Sbjct: 289 ENGKLLPYFVSIRNGNA-EHLENVVKGNQKVLVARLEDAEFFWREDQRLV---------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALV 411 + + +L +V FH KIG+ E + R + +A+ L ++ V Sbjct: 338 ----------ISDLVEKLK--NVTFHEKIGSLAEHMERTAKIAALLAEKAQLSKQEMKDV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 386 ARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENTAVAKAIREHYLPTASDGELPDT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 K+ +S+ADK+DT+++F+++ PSGS DPYALRRAT G++RI+ + I L + +E Sbjct: 446 KVGAILSIADKMDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWHIALDELVEE 505 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + ++ FF R++ + D D+ D++ ++L + +V+ L Sbjct: 506 IYALQFDSLTYSDKEQVLDFFRARIEKMM-DSDVPKDIVSSVLNSSTFVVRYLVEAASLL 564 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 E + + S R+F + E + + EK L+A + + Sbjct: 565 AEKAQEDSFKSSVESLARVFNLAEKAETASV-----VDESLFENAEEKALHAAVENLTL- 618 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + L ++ I+ FFD +V +D +R NRL+L+ + V Sbjct: 619 ------SDDLADNIEQLFALSPVIDAFFDNTMVMAEDEAIRANRLALIAALMTKAKKVAQ 672 Query: 698 VQKI 701 +I Sbjct: 673 FNQI 676 >gi|58040174|ref|YP_192138.1| glycyl-tRNA synthetase beta chain [Gluconobacter oxydans 621H] gi|58002588|gb|AAW61482.1| Glycyl-tRNA synthetase beta chain [Gluconobacter oxydans 621H] Length = 684 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 234/722 (32%), Positives = 356/722 (49%), Gaps = 61/722 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F +E++SEEIP+ MQ AA +L +L L G+ +++R ++ R+ L + Sbjct: 1 MAEFFIELFSEEIPSGMQAGAAVELGNMLAKALS--GLNPRDLRTFFGARRIAASLT-VD 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P + GPR GA +KA+ GF R G+ + G L P Sbjct: 58 AEIPARNVSERGPREGAPEKALAGFTRKHGVTPDEL-----TLENGFWVLNKSLDPVS-A 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL-- 178 E + VP + K PWPKSMRW S F+W+RPL+ I C+L ++ Sbjct: 112 ESRVAEAVPELLWKFPWPKSMRWGAG----SNFTWVRPLRRIACLLDG-----HVVPFAL 162 Query: 179 -----DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 D + N++ GHRF AP P ++ S + +LE V++D + RR+ + Sbjct: 163 AREGDDAHGLKASNLSEGHRFLAPGPFEILSGQQWQEELETRSVIVDMDSRRDMVRTGVT 222 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 RLA G+ +V+D L++E+ GLVE+ +G D ++ LP E+++++++ NQ+ F R Sbjct: 223 RLADQHGIMVVQDDGLVDEVCGLVEYPVPLLGKIDAAFMDLPAEVMQVSMRINQRYFALR 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G A F V N+ DGG GN RV+ AR DA HFW D+ Sbjct: 283 NPDGKAAPYFAFVGNLPFKDGGKLTTAGNERVLRARFADARHFWDLDRK----------- 331 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VAL 410 L R+ L V FHA++GTQ ER RI L +AQ + D +A Sbjct: 332 ---------TKLADRVPAL--AAVTFHAELGTQAERAERISKLAGTVAQAMGLDGAQIAQ 380 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +RA +L+KADL T +V EFPELQG +G YAV E+ + A+ EH PRG ++ Sbjct: 381 AERAGLLAKADLTTGMVGEFPELQGVMGGYYAVHDGEDEAVSRAVAEHYLPRGQSDDTAK 440 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S+ V+LAD+LD L F+AI E PSGS DPYALRRA LGIIR I +N + + LS+ Sbjct: 441 APVSVAVALADRLDLLAGFFAIGELPSGSGDPYALRRAALGIIRTIRDNGLRLDLSELFA 500 Query: 531 DQNLI----------LFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNE 579 F +RL++ L RHD++ A L D +L+ ++ L+E Sbjct: 501 QAANGRTGGELAKLPDFIAERLRVQLRSEGERHDVLAATLAGGLDGDLVRLLARTSALSE 560 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + G L +AKR IL IE+KK+ + P + E+ L + I+ Sbjct: 561 MIQTEDGRNLLAAAKRAANILRIEDKKDGPHTGAPDPALYTQDEERALATGLDQAVPAIE 620 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ +R+ + ++ ++ FF+ V VN + EVR NRL LL + ++ + Sbjct: 621 TALKEERFTDAMQAIAALRPTLDRFFEAVTVNTPEPEVRANRLKLLSCFRETTALIADFG 680 Query: 700 KI 701 +I Sbjct: 681 QI 682 >gi|121603358|ref|YP_980687.1| glycine--tRNA ligase [Polaromonas naphthalenivorans CJ2] gi|229558568|sp|A1VJD8|SYGB_POLNA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|120592327|gb|ABM35766.1| glycyl-tRNA synthetase beta chain [Polaromonas naphthalenivorans CJ2] Length = 711 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 202/739 (27%), Positives = 347/739 (46%), Gaps = 70/739 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L LK G+ + Y +P RL ++ + Sbjct: 4 KNLLVELFVEELPPKALKKLGDAFAGVLAEQLKALGLATAESVVTAYASPRRLAAHISHV 63 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTG------LQTISDCQIKKDPKKG 106 + +K ++++L P G A+ L++ G + ++ + D K Sbjct: 64 WLKADDKAVQQKLMPVSVGLDSAGHATPALLKRLQALGADLSDPVAAVAALKRAPD-GKA 122 Query: 107 DVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSI 162 + ++ L+ + AI K+P PK M + ++ +++RP + Sbjct: 123 EALFYNSLVTGATLDTGLQKALEEAIAKLPIPKVMSYQLETDCELPGWTSVNFVRPAHGL 182 Query: 163 LCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLD 220 + + ++ + + + GN T GHRF A P+ + D Y LE + V+ Sbjct: 183 VAL-----HGSTVVPVKVLGLKAGNSTRGHRFEAAVDPVVLADADSYAVTLEIDGAVIAS 237 Query: 221 PECRRNAILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEEL 278 R+ I A+ +G + +ED LL+E+ LVE V + F+K++L +P+E Sbjct: 238 FAQRKAEIARQLAEAAAELGGGVQPIEDDALLDEVTALVERPNVLVCEFEKEFLDVPQEC 297 Query: 279 IRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + LT+K NQK F G L N F++VSNI D + ++ GN RVV RL DA F+ Sbjct: 298 LILTMKANQKYFPLLDAAGKLTNKFLVVSNISPEDA-SFVIGGNERVVRPRLADAKFFFD 356 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 +D+ + L R+ L VV+H K+GTQGER R+ + Sbjct: 357 QDRK--------------------RTLASRVEGLG--KVVYHNKLGTQGERTERVAEIAV 394 Query: 399 KIAQLIDADVALVDRAIV--LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 KIAQL++ D L+KADL T++V EFPELQG +G+ YA+ + AIE Sbjct: 395 KIAQLLEGDALAGKAGKAAWLAKADLLTDMVGEFPELQGTMGRYYALHDGHSAEIAAAIE 454 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 +H KPR + +P N + + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR++ Sbjct: 455 DHYKPRFAGDELPRNPVGVVVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRML 514 Query: 517 LENKIDIPLSQFIEDQNL-------------ILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +E + + L + + F +DRL L ++ +++++ + Sbjct: 515 VEKDLPLDLGALVGGAAPVFGDKITDATPALLDFIYDRLSGSLREQGYSAQEVDSVVSQK 574 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + + + F + + + KRI IL +K+ E+ +S L A Sbjct: 575 PQRLGDVPKRLAAVRAFAALPEAPALAAANKRIGNIL---KKEALEVDPHVSELLLREAA 631 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E LYA + D D Y L ++ P++ FFD V+VN ++ ++R NR Sbjct: 632 EIALYAAMRDVVPTANAQFDTGDYTASLQTLAALRAPVDAFFDGVMVNAEELDLRLNRQG 691 Query: 684 LLQYIKNIILIVINVQKIV 702 LL+ + N + V ++ ++V Sbjct: 692 LLKSLHNAMNRVADLSRLV 710 >gi|325688749|gb|EGD30758.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK115] Length = 679 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 344/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGVFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEAEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 E L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAESKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRGIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + +++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TDVNPALFENQEEKDLAAAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D ++ I+ FFD +V +D VR+NRL+LL + + + Sbjct: 619 -------TSDLAANLDQFFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTSKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 KFNQI 676 >gi|317165546|gb|ADV09087.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae TCDC-NG08107] Length = 687 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 209/707 (29%), Positives = 348/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + + + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIIHDGRQ-DVYAYEYVQTGKPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 NIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + I +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q + + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTENP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGAVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI 682 >gi|303228981|ref|ZP_07315791.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-134-V-Col7a] gi|302516395|gb|EFL58327.1| glycine--tRNA ligase, beta subunit [Veillonella atypica ACS-134-V-Col7a] Length = 683 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 199/728 (27%), Positives = 336/728 (46%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI +EEIPA L + L + + ++++ Y TP RL L +KGL Sbjct: 1 MAKDLLFEIGAEEIPAGFMPNILGQLKTLAETKLNDAHLPFESIATYGTPRRLALIVKGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S E E GP G KA GF R GL + +D A Sbjct: 61 GDTSAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVAD--LVVEDG----YIYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + +D++ ++P I + +PKS+ W + ++RP++ ++ +L Sbjct: 115 TKTAGVPAKDIVTDMLPQLITGLNFPKSLHWGNLDA-----KFVRPVRWLVALL-----D 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I ++ + GN+T GHRF I +++ Y+ L+E V++D + RR I Sbjct: 165 EEVIPVEFATVKSGNVTRGHRFLGADEISIKNAASYVDTLKENFVMVDQDARRELISKQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 H +A++ +V D DLLEEI LVEW G F++ YL LP+ I +K +Q+ F Sbjct: 225 HDIAASKNASIVWDDDLLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++G L F+ V N + + GN RV+ ARL+DA F+ D+ Sbjct: 285 VDQDGKLLPMFLTVRNG-SDHSIEVVQAGNERVLRARLDDAKFFFNEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL 410 KPL R L +VF +G ++ R+ LG+ ++ + D + Sbjct: 334 ----------KPLIDRQDGL--TKIVFQEGLGNLADKTERLLTLGRVFSEECELHEDARV 381 Query: 411 V-DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 V +RA L+K DL T +V EF ELQG +GKEYA+L E+ +AI E PR + +P Sbjct: 382 VLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGESPEVAEAIFEQYLPRYAGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ DK+D ++ ++ P+GS+DPYALRR T+GI+ I+L ++ +I L I Sbjct: 442 QTEAGKVLSIIDKIDNIVATFSRGLIPTGSQDPYALRRQTIGILNILLGSEWNISLRPII 501 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +L F RLK DR++ H +I+ +L ++ L Sbjct: 502 VESMNLLNVPADKQDELLGQVEEFITLRLKNIFLDREVPHHVIDLLLSNNELSVADAEGL 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K L + + + + R++ ++ + L EAE+ LY + + Sbjct: 562 VKALLA-NRIDENVELVQAFTRMYNLVK------DVTYTGVDESLLKEEAERALYEMATK 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ D Y + + ++ I FF+ V+V D ++ NRL L++ +++ Sbjct: 615 ASEASIDAWDKNDYDAVVAVPATLVPAINKFFEDVMVMDKDEAIKANRLQLVRLAYSVMA 674 Query: 694 IVINVQKI 701 I+ ++ + Sbjct: 675 IIGDISAL 682 >gi|116690722|ref|YP_836345.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia HI2424] gi|116648811|gb|ABK09452.1| glycyl-tRNA synthetase beta chain [Burkholderia cenocepacia HI2424] Length = 699 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 339/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +P+K + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELVFERYATPRRLAVVVQNVRAVAPDKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNASIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++++ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLHTAHARFAGVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRVPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|296134526|ref|YP_003641768.1| glycyl-tRNA synthetase, beta subunit [Thiomonas intermedia K12] gi|295794648|gb|ADG29438.1| glycyl-tRNA synthetase, beta subunit [Thiomonas intermedia K12] Length = 721 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 356/731 (48%), Gaps = 62/731 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLS 60 + L+E++ EE+P + E + L L+ +G+ + Y +P RL + + ++ Sbjct: 21 NLLVELFVEELPPKALPALGESFARTLAASLQSQGLAASDCEPTPYASPRRLAVRIPAVA 80 Query: 61 PHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 + +K ++L P G A+ L + GL + +++++ K + Sbjct: 81 AKAADKAVAQKLMPVAVGLDADGKPTPALLKKLGALGLDADAAPRLRREGEGKAETLFID 140 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + + L+ + AI K+P PK M + + ++RP ++ + A+ Sbjct: 141 TVAPGASLAEGLQKALAEAIAKLPIPKVMAYQLEDG-WTTVKFVRPAHGLVALHGAD--- 196 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 ++ + + G T+GHRF A PI +++ D Y L E V+ + RR I Sbjct: 197 --VVPVQALGLTAGRETHGHRFEAQADPIVLRNADSYADQLREQGAVIASFDARRAEIAA 254 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A G L ++D LL+E+ LVE V + FD +L +P+E + LT+K NQK Sbjct: 255 QLQATARQAGPGLHPIDDAALLDEVTALVERPNVLLCQFDPAFLAVPQECLILTMKANQK 314 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSNI +D +A+++GN RVV RL DA F+++D+ Sbjct: 315 YFPLLDAAGKLTHRFLVVSNISPADP-SAVIEGNERVVRPRLADAQFFFEQDRK------ 367 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD- 407 K L+ R+ LD VV+HAK+G+QGER+ R++ L IA+ I Sbjct: 368 --------------KRLEDRVPGLD--KVVYHAKLGSQGERMRRVQALAGGIARQISPSF 411 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V +RA +L+K DL T++V EFPELQG +G+ YA E+ +AIE+H KPR + Sbjct: 412 PVEQAERAALLAKTDLLTDMVGEFPELQGFMGRYYAAHDGEDAWVAEAIEDHYKPRFSGD 471 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + + ++LADK +TL+ + I E+P+G KDP+ALRR LGI+R+++E I LS Sbjct: 472 VLPRSDVGFALALADKTETLVGLFGIGERPTGDKDPFALRRHALGILRMLMERGQGIELS 531 Query: 527 QFIEDQNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +++E+ + F +DRL L ++ ++A+L L + Sbjct: 532 RYLENAVPVFSGVAGFSDPSADVQTFLYDRLANLLREQGWTAQEVDAVLALSPQILADVP 591 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL E + L+ AE L + Sbjct: 592 RRLEAVRAFAALPEAAALAAANKRVGNILRKSEGAKH--GSGFNADLLVEPAEIALSQAL 649 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +Q+ Y +L ++ EP++ FFDQV+VN +D +R NRL+LL ++ Sbjct: 650 NAVAPQVQQLYAAGDYTAALKMLAALKEPVDTFFDQVMVNAEDPALRVNRLALLARLQEA 709 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 710 MNQVADLSRLA 720 >gi|167579892|ref|ZP_02372766.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis TXDOH] Length = 699 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 341/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + ++ + + L +I + +Y TP RL + ++ + +PE+ + E+ Sbjct: 19 PPKALARLSDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + P + + Sbjct: 79 VLPVSVALDAQGKPTAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYASPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLSAL-----HDDRIVPVCAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q + Y L + VL R+ AI A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHANAYADTLRDKGRVLAHFAGRKEAIRAQLE--ANADGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPDE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+Q R+ R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSQLARIERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPEDIAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTTYERFAAVPDV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF +RL+ L +R ++A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFVERLRGLLRERGYTAGEVDAVLSLNPTRLDDIVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDAFFDGVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|51245338|ref|YP_065222.1| glycyl-tRNA synthetase, beta subunit [Desulfotalea psychrophila LSv54] gi|50876375|emb|CAG36215.1| probable glycyl-tRNA synthetase, beta subunit [Desulfotalea psychrophila LSv54] Length = 689 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 204/727 (28%), Positives = 335/727 (46%), Gaps = 68/727 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EE+PA Q + + L I E + + + +P RL + +K L+ Sbjct: 1 MRDLLFEIGTEELPAGFQRPSLQQLKEKFIQKAAELKIEHGAVVTLGSPRRLTIIVKDLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +EE LGP G KA GF RS G ++ D Q+ + KG+ + V Sbjct: 61 LKQDDILEELLGPSKKAAFDGDGNPTKAAQGFARSKG-ASVEDLQVVETA-KGEYLMLVR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L ++ I ++ + KSMRW + + ++ RP++ +L + E Sbjct: 119 ELKGQETVALLPKLLEELIGELSFAKSMRWGSYTT-----TFARPIQWLLALF-----GE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ L +I + + GHRF A V+ Y L E V++DP RR ++ + H Sbjct: 169 DVVALKHGDIVSAHTSRGHRFMANVDFVVKDAASYEELLLEHNVIVDPAKRRAKVVEEIH 228 Query: 234 RLASA---VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 R + V L D++L++ + LVE+ G F K +L LP+E++ +++ NQK F Sbjct: 229 RALAESTLVEGTLAVDEELVDTVTNLVEYPYGVCGVFAKSFLDLPDEVLTTSMRVNQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L N F+ V+N + D +G+ RV+ ARL+DA+ F+ D+ Sbjct: 289 TIVDDAGALVNGFVAVNNTKVIDS-EVTRKGHQRVLRARLDDAIFFFAGDKK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VA 409 L+ R+A L +VF K+GT E+ RI L + +A++ID VA Sbjct: 340 ------------TSLESRVASL--AGIVFQTKLGTMAEKTERIVKLTRSLAEVIDHSLVA 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L KADL T++V EF LQG +G YA E AI+EH P+ +P Sbjct: 386 DACRAATLCKADLITDMVGEFTSLQGVMGAAYATNDGEKEGVALAIKEHYMPKRAGAELP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + V LAD+LDT+ + I + P+G+ DP+ LRR TL ++ II E I L + Sbjct: 446 DTDLGALVGLADRLDTIAGCFGIGQIPTGTADPFGLRRLTLAVLHIISERGYTISLHEMV 505 Query: 529 ---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +I F RL R +EA+L D+L I Sbjct: 506 GKALALYGDKVNGGNETVEKIIDFMRGRLANDCVSRGQNAGAVEAVLSLGFDDLGDIHAR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ L E S KRI I+ ++E+ +AE+ L+++ Sbjct: 566 IQALMEVRKEDSFAVLAASFKRIRNIIK------NNTAVEVQTDLFEEDAERNLFSLFQL 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +Q+ + K Y ++ + EP++ FF+ V+V ++ VR NRL+LL + ++++ Sbjct: 620 VAAEMQDLVAKKEYLAALMVMLKMKEPVDAFFESVMVMAENDAVRQNRLNLLTALADLVM 679 Query: 694 IVINVQK 700 + ++ K Sbjct: 680 QIGDISK 686 >gi|46580306|ref|YP_011114.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio vulgaris str. Hildenborough] gi|81830422|sp|Q72AU3|SYGB_DESVH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|46449723|gb|AAS96373.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris str. Hildenborough] gi|311233711|gb|ADP86565.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris RCH1] Length = 696 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 207/729 (28%), Positives = 327/729 (44%), Gaps = 63/729 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+PAR +L+ L + G+ +R TP R + + ++ Sbjct: 1 MSQFVLEIGTEELPARFLPALERELAERFTRALADAGIECDPVRVMSTPRRAVVRMDAVN 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E E GP KA +GF R+ G++ ++ D KG+ Sbjct: 61 PVQSESEEVVTGPPARIAFTPEGGLTKAAEGFARTQGVEVADIFRLTTD--KGEYIAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L+ I P I +P+PK MRW + F++ RP++ +L + E Sbjct: 119 HMGGARSIDLLRDICPAIIGALPFPKRMRWGSGD-----FTYARPMRWLLALF-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 ++D ++ + GNITYGHR H P+ V Y R + E V E RRNA++ Sbjct: 169 SVVDFEVGGVRSGNITYGHRIHGAGPLTVARAGDYERVIREQGGVTPVGEERRNAVVKGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + LA A G +++ LL+E+ GLVE +G+ D +L LP E++ +++++QK F Sbjct: 229 NALAVAAGGKVIWKDSLLDEVQGLVEHPVPCLGNIDPSFLELPREVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L F+ V N+ D G + +G RV+ ARLEDA FWK D Sbjct: 289 EDAEGRLMPHFLTVLNLTPLD-GDLVRKGWERVLRARLEDARFFWKTD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 L+ D +A LD +V+F +G+ G++ R+ L +A + D Sbjct: 336 --------LASSFDAWLASLD--NVIFLGPLGSMGDKTRRLEQLCAWLAAEVGFDDATAA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSK DL + +V EF LQG +G YA E + AI E P GP VP++ Sbjct: 386 ARAGRLSKGDLVSGMVGEFDTLQGIMGGIYARRMGEAEAVAAAIAEQYLPAGPDSPVPSS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ADK DTL + + P+G+ DPYALRR LGI RIILE+ + + + Sbjct: 446 MCGALLSIADKADTLAGCFGLGMIPTGAADPYALRRCVLGIARIILEHGLQLDVRGLFAK 505 Query: 532 QNLIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + FF RL+ L+EA+L D++ + Sbjct: 506 AFALYGERAWKLAPEDALVKLDEFFMARLRNLFIANGYETLLVEAVLAAGCDDVRSAGAR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVIS 632 ++ L F +L+ KR I+ + + + L+ +AE++L A + Sbjct: 566 LEALAAFSRRDDFASAVLTFKRAANIIRKQGGDSDVALDGAWKADLLVEDAERQLAASLE 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 Y + LL + ++ FF+ V+V DD +R NRL+LLQ + + Sbjct: 626 AMFPRFDGLWAEGDYPALFGLLGELRPVVDGFFEGVMVMSDDAALRTNRLNLLQALVGRL 685 Query: 693 LIVINVQKI 701 + + + Sbjct: 686 SRLADFGAL 694 >gi|113866550|ref|YP_725039.1| glycyl-tRNA synthetase subunit beta [Ralstonia eutropha H16] gi|113525326|emb|CAJ91671.1| Glycyl-tRNA synthetase beta subunit [Ralstonia eutropha H16] Length = 707 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 205/738 (27%), Positives = 351/738 (47%), Gaps = 72/738 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLK 57 M D L+E+++EE+P + + + + L L E ++ + + TP RL + Sbjct: 5 MTDSLLIELFTEELPPKALARLGDAFAQGLFAGLGERDLLEPGATVTPFATPRRLAALVS 64 Query: 58 GLSPHSPEKIE-ERLGPRVGAGKKAIDGFL----------RSTGLQTISDCQIKK-DPKK 105 G+ +P++ + E++ P A + +S G+ I +++ K Sbjct: 65 GVRRSAPDREQREKVLPLSVALDANGEPTAPLAKKLAALAKSVGVAEIDWQSLERASDGK 124 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCI 165 + + + ++ + I K+P PK M + S ++RP S++ + Sbjct: 125 AEAFFYRYTARGAELAAAVQAALEDTIAKLPIPKVMSYQRPDG--STVHFVRPAHSLIAL 182 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECR 224 AE I+ + L + N+T GHRF + I++ + Y + LE A V+ R Sbjct: 183 FGAE-----ILPVTLLGLQASNLTQGHRFLSHGVIEIAHANDYAQRLESAGHVVASYAER 237 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R + + A A +++ + LL+E+ LVEW V+ F++ +L +P+E + LT++ Sbjct: 238 RERMRAALLKEAGAD--QVIMPESLLDEVNSLVEWPVVYACHFEEAFLAVPQECLILTMQ 295 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 TNQK F +G L N F++VSN+ A++ +I+ GN RVV RL DA F+ +D+ Sbjct: 296 TNQKYFALTDADGHLRNRFLIVSNL-ATETPQSIITGNERVVRPRLADAKFFFDQDRK-- 352 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K L R+ +L VV+H KIGTQ +RV R++ + IA + Sbjct: 353 ------------------KTLASRVPQL--ASVVYHNKIGTQLDRVQRLQQIAGHIADAL 392 Query: 405 DA-----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 + D A R L+KADL T++V EFPELQG +G YA +E A EH Sbjct: 393 NGSGVPTDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDEAEDVALACSEHY 452 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PR + +P +S V+LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E Sbjct: 453 RPRFAGDALPAGAVSTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEK 512 Query: 520 KIDIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + + LS + F +DR++ YL D+ + +EA++ Sbjct: 513 PLALSLSSLLALTQQAFAGIAAVKPAPDAIADFLYDRVRGYLKDKGYTTNEVEAVVSLRP 572 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 D L I+ ++ + F + + E + KRI IL +KN E + P EAE Sbjct: 573 DQLHDILGRMEAVRTFAALPEAEALAAANKRITNIL----RKNTEPVGAVDPALFREEAE 628 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+A I ++ + + L + + ++ FF+ V+V +D ++R NRL+L Sbjct: 629 GALHAAIERVRPAVEAAFASGDFTAALRDLAQLRDAVDRFFNDVMVMAEDAQLRANRLAL 688 Query: 685 LQYIKNIILIVINVQKIV 702 L + + V ++ K+ Sbjct: 689 LASLHAMANRVADISKLA 706 >gi|239998102|ref|ZP_04718026.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] gi|268593954|ref|ZP_06128121.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] gi|268547343|gb|EEZ42761.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] Length = 687 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 210/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIIHDGRQ-DVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q + + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTENP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L KK E++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLL----KKADAALGEVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADI 682 >gi|240124847|ref|ZP_04737733.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|268683428|ref|ZP_06150290.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|268623712|gb|EEZ56112.1| glycyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] Length = 687 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 208/707 (29%), Positives = 349/707 (49%), Gaps = 62/707 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ ++ Y +P RL + +K + ++ + Sbjct: 16 PPKALNNLGNHFAASVAEGLEKAQLVDGAAEFTAYASPRRLAVQVKNVKAVQADQKIVKK 75 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP V G KA++GF R G + I D I D ++ DVY + R + +L+ Sbjct: 76 GPAVANAVKDGTPTKALEGFARGAGAK-IEDLTIIHDGRQ-DVYAYEYVQTGRPLGGLLE 133 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I+ A++K+P PK MRW + S F+++RP+ ++ + + ++++ + + Sbjct: 134 DIINQAVKKLPIPKVMRWGS-----STFTFVRPVHGLIVLHGGD-----VVNVSVLGLQS 183 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + +++ D Y + + V+ R+ AI A + + Sbjct: 184 GNQTLGHRFLSDGEMIIENADSYAAQMRGQGKVVASFAGRKAAIQTALEGQARRLNATVA 243 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 D+ LL+E+ LVEW V F++ +L +P+E + LT++ NQK F + G L N F+ Sbjct: 244 ADEALLDEVTALVEWPVVLEAGFEEHFLAVPQECLILTMQQNQKYFPLLDQNGKLMNRFL 303 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN+Q D + I++GN RV+ ARL DA F+K+DQ Sbjct: 304 LVSNLQTEDP-SHIIRGNERVLRARLSDAEFFYKQDQK--------------------AT 342 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 L+ R+ +L +VV+H KIG+Q ER+ R++ + IA+ + AD A +RA L+KADL T Sbjct: 343 LESRLPKL--ANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAARLAKADLVT 400 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 E+V EFPELQG +GK YA L E +AIE+H +PR + +P +KI+ V+LADKL+ Sbjct: 401 EMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIAAAVALADKLE 460 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP-------------LSQFIED 531 TL+ W I P+G KDPYALRRA LGI+R++++ +D+ L Sbjct: 461 TLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFDSFPQGLLNEKTP 520 Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 F RL + L + D D++ A+L + L + ++ + F + Sbjct: 521 SETADFMQARLAVLLQN-DYPQDIVAAVLAKQPRRLDDLTAKLQAVAVFKQLPEAAALAA 579 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ +L + + ++ L + EK LYA I ++ + Sbjct: 580 ANKRVQNLLKKADAELG----AVNESLLQQDEEKALYAAAQGLQPKIAAAVAEGNFRTAL 635 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 L S+ ++ FFD V+V +D V+ NRL+LL + + V ++ Sbjct: 636 SELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADI 682 >gi|331001256|ref|ZP_08324882.1| glycine--tRNA ligase, beta subunit [Parasutterella excrementihominis YIT 11859] gi|329568983|gb|EGG50779.1| glycine--tRNA ligase, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 696 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 215/727 (29%), Positives = 362/727 (49%), Gaps = 57/727 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLKG 58 M L+EI +EE+P + ++ + L LKE+ + + Y +P R+ + Sbjct: 1 MASLLIEIQTEELPPKALDNLSKAFAKELTFSLKEQDLALPNAQVTAYGSPRRIAALISD 60 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 +S +P+K ++L P G A+ +++ G++ + K D + Sbjct: 61 VSEVAPDKPFRQKLVPVKVGLDAEGKATPALSKKMKALGIECEPSELKVVNDGKQDQLVY 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 K ++D L+ + A++++P PK M + + ++RP+K ++ + Sbjct: 121 EGTKAGVSLKDGLQIALDHAVRRLPIPKVMSYQLENGK--TVEFVRPVKHLVALF----- 173 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 ++I+ ++L + G T GHRFH PI ++ + Y +E E ++ E R+N ++ Sbjct: 174 DKEIVPVELFGLKAGRETMGHRFHVKEPISIKEAEKYAEQMEKEGKIVASFEERKNKMVG 233 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + A + E++ DL+ E+ L EW V+ FD+++L +P E + LT++ NQK F Sbjct: 234 ELKSAAEKLNAEIIMPDDLVNEVAALTEWPVVYESGFDEEFLTVPAECLILTMQQNQKYF 293 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 R + L N F+LVS I+A DGG AI GN+RVV ARL DA F+ +D+ Sbjct: 294 ALRDKNKKLMNRFLLVSQIEAKDGGEAIRSGNARVVRARLADAKFFYDQDR--------- 344 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ R+ L VV+H K+GTQ ER R++ + +IA+ I AD AL Sbjct: 345 -----------LQTLESRVPGL--AHVVYHNKLGTQLERSERVQKIASRIAEQIGADPAL 391 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL T +V EFPELQG +G+ YA E+ AI EH +PR + +P+ Sbjct: 392 ARRAAKLAKADLRTLMVGEFPELQGIMGEYYAHHDKEDDKVALAIREHYQPRYAGDELPS 451 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 S+ V+LADK++TL + I + P+G KDP+ALRR LGI+R+++E ++ + L + Sbjct: 452 TPESLAVALADKIETLTGLFGIGQLPTGEKDPFALRRHALGILRMLIEKELPLSLDKLIA 511 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + L FFHDRL++ D+ +E+++ E L + +K Sbjct: 512 IGTEEESVVPGVKDATEELKQFFHDRLRVMQKDQGFTAHEVESVIGSEPAILADVPKRLK 571 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +++F S + E + KRI IL +K ++ + P L + EK LY I Sbjct: 572 AVHDFMSLPEAESLAAANKRIENIL---KKNTLPLADAVDPALLTEKEEKDLYEAIRTLE 628 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + P++ FFD+V+VN +D +R NRL+LL + + V Sbjct: 629 PKLEADYKAGRYEDELRSLAPLKAPVDAFFDKVMVNAEDEALRRNRLTLLNELHKAMNQV 688 Query: 696 INVQKIV 702 + + Sbjct: 689 AKLSCLA 695 >gi|325983624|ref|YP_004296026.1| glycyl-tRNA synthetase, beta subunit [Nitrosomonas sp. AL212] gi|325533143|gb|ADZ27864.1| glycyl-tRNA synthetase, beta subunit [Nitrosomonas sp. AL212] Length = 731 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 204/747 (27%), Positives = 358/747 (47%), Gaps = 90/747 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + +L L+ +G++ Q+ + Y TP RL +++ ++ + +K + ++ Sbjct: 16 PPKSLKQLGDSFAQLLTASLEAQGLMSQDAPVTAYATPRRLAVHIGNVAAQAADKAVTQK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G + L S G Q+K + K + + D Sbjct: 76 LMPVKVGLDAQGQATPPLLKKLASLGADASVVPQLKHELDGKTETLFWDSIATGTALTDG 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + I ++P PK M + S+ +++RP+ +++ + A+ I+ L + + Sbjct: 136 LQKALQETITQLPIPKVMTYQLADG-WSSVNFVRPVHALVALHGAD-----IVPLTILGL 189 Query: 184 PCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGL 241 G T GHRF A +PI + + D Y + L E V+ RR I + A+ L Sbjct: 190 QAGRETQGHRFEAKVNPIVLHNADSYAQQLLTEGAVMAGFVDRRTEITHQLAVSAAKENL 249 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++D LL+E+ LVE V +G FD +L +P+E + LT+K NQK F +G LAN Sbjct: 250 TPIDDDALLDEVTALVEHPNVLVGKFDAAFLQVPQECLILTMKANQKYFPLLDAQGKLAN 309 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+LVSNI+ ++ A ++ GN RVV +RL DA F+ +D+ Sbjct: 310 KFLLVSNIRPTNP-AQVIAGNERVVRSRLADAKFFFDQDRK------------------- 349 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAIVLSK 419 K L R+ LD +V++H K+G QG+R+ +R + K I Q ++ + A +L+K Sbjct: 350 -KTLASRVPELD--EVIYHNKLGVQGQRMHYVRAIAKMIGQQLNGEILANQAYTAAMLAK 406 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL T +V EFPELQG +G+ YA AIE+H KPR +++P N++ I ++L Sbjct: 407 TDLLTGMVGEFPELQGIMGRYYAQYDGLGNDIAFAIEDHYKPRFAGDDLPRNEVGICLAL 466 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL----- 534 ADKL+ L+ + I E P+G KDP+ALRR LG++RI++E K+ + L+ I Sbjct: 467 ADKLEILVGMFGIGEIPTGDKDPFALRRHALGVVRILIEKKLPLELNTLIMQTASIFNDQ 526 Query: 535 ---------------------------------------ILFFHDRLKLYLHDRDIRHDL 555 + F ++RL L ++ Sbjct: 527 MIENQWSKSYFDWKKKSEMKALAVGVRGLNIKEESTGRLLEFIYERLAGSLREQGYTAQE 586 Query: 556 IEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 ++A+L NL I + + F + + KR+ IL +K + S++++ Sbjct: 587 VDAVLSLNPQNLSDIPKRLAAVRSFAVLPEAVSLAAANKRVGNIL---KKTEGDTSVKVN 643 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 L AE++LY V+ D + ++ + Y +L ++ P++ FFD V+VN+D+ Sbjct: 644 SSLLQEPAEQKLYDVLIDLSIEVDGALFARDYKAYLQILAALKLPVDTFFDHVMVNIDNE 703 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKIV 702 +R+NRL+LL+ + +I+ + ++ K+ Sbjct: 704 SLRNNRLALLRELHDIMNRIADLSKLA 730 >gi|91204463|emb|CAJ70963.1| similar to glycine-tRNA ligase (beta-chain) [Candidatus Kuenenia stuttgartiensis] Length = 708 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 219/744 (29%), Positives = 348/744 (46%), Gaps = 83/744 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A + + K + +Q++ TP RL +++KGL Sbjct: 1 MTDLLFEIGTEEIPAGYITPALNQIKTLFGERFKYFRLTFQSIYCTGTPRRLVVFIKGLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 EE GP V G KA GF +S G+++ + K KG+ +A+ Sbjct: 61 EEQESVTEEIQGPSVAIAFDKAGNLTKAGLGFAKSQGIESNTLQT--KKTAKGEYCIAIK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + +L I+ IQK +PKSM+W T + + RP++S+L + Sbjct: 119 QITGEKTLHLLPGILEEIIQKTSFPKSMKWKTNN-----LFFARPIRSLLALF-----GN 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLD--HYIRDLEEAMVLLDPECRRNAILND 231 K++ L++ I GN+ GH F + I++Q D Y + L++ V++D RRN + Sbjct: 169 KVVPLEINGIKAGNVFSGHPFLSGKKIEIQVADWEQYKQLLKQEKVIVDIPERRNILKEK 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +L G D+ LL+E+ LVE+ SFD K+L +P+ +I +K +Q+ F Sbjct: 229 ITKLMKQHGATFD-DESLLDEVANLVEYPNAVTCSFDDKFLDIPDIVIETAMKEHQRYFP 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + +G L N FI+ N + I QGN RV+ ARL DA FWK D+ Sbjct: 288 VKKADGKLINKFIVALNRDEPNENYPI-QGNERVLKARLYDARFFWKEDRKI-------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID------ 405 PL++R+ L L VF K+G ER RI L +++ + Sbjct: 339 ------------PLEKRVEDLKQL--VFLEKLGNYYERTGRIVALTDYLSKQLIRFNHPD 384 Query: 406 ---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 AD+ RA +L K DL T++V EFP LQG +G+EYA E + AIEEH PR Sbjct: 385 FSIADIDAAKRAALLCKTDLLTQMVGEFPSLQGIMGREYAAWDGEEPAVALAIEEHYLPR 444 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P++ I V LADK DT+ +A+ P+GS+DPY+LRR GIIRII E+ Sbjct: 445 FAADKIPSSIIGAIVGLADKFDTISGCFALGLHPTGSQDPYSLRRHAYGIIRIIEEHGFT 504 Query: 523 IPLSQFIEDQNLIL--------------------FFHDRLKLYLHDRDIRHDLIEAILR- 561 + L + + IL FF +RL ++ HDL+ A+L Sbjct: 505 LMLEEVLGQSLSILMSQTQSSLFTSDKLIPEIKNFFRERLFHTNIEKGCSHDLVNAVLNA 564 Query: 562 -PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 D++ + +K ++ + +R F I + + +S L Sbjct: 565 GAGFDDMYDFLQRLKDVSMLSKEKYWPDLVSVVERTFNISKKVKGEGM-----VSTNLLN 619 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS-ICEPIEIFFDQVLVNVDDREVRD 679 + E +L+ + + I+ + K+Y + + EP+ FF++V VNV+D E+R+ Sbjct: 620 EKEELQLWEIYTANEAKIRTMIQDKKYVEASFTYNEVFAEPVHAFFEKVFVNVEDMEIRN 679 Query: 680 NRLSLLQYIKNIIL-IVINVQKIV 702 NRL LL+ I + + ++ +I+ Sbjct: 680 NRLLLLREINQLYSEKIADLSQII 703 >gi|188996975|ref|YP_001931226.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|229558585|sp|B2V9P9|SYGB_SULSY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|188932042|gb|ACD66672.1| glycyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 678 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 197/717 (27%), Positives = 346/717 (48%), Gaps = 56/717 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKG 58 M +LLEI EE+P + E L K+ + +N++ Y TP RL + +K Sbjct: 1 MKSYLLEIGCEELPPKAILTYKEFLKEYAHQTFKDFFIYNSPENIKIYATPRRLAVLIKN 60 Query: 59 LSPHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L + +GP KA F + +I + KG+ A Sbjct: 61 LKKKQDNQKITLIGPPYKVAVDSEGKFTKAALSFAEKNNIPLEKLEKITTE--KGEYLGA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + K +E +K +P + P KSM+W+ + + + RP++ I+ +L Sbjct: 119 TIEKEGESLELFIKHKIPQLFNQFPQLKSMKWNNSD-----YRFPRPIRWIVSLL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 +K+I+ ++ + T+ HRF + + Y + ++ + E R++ Sbjct: 169 DDKVIEFEVASVKTDRFTHLHRFMTKPIGRGERKDINHANDYEEITKLGYIIANFEDRKH 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 +I A + ++ED +L++EI L E+ +G F +YL LP+E+I K + Sbjct: 229 SIKTQYEGFARQLNASIIEDDELIDEITCLTEFPVGIVGDFSPEYLTLPKEVIITVCKHH 288 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 Q+ + ++G L F+ SN D + G +V+ ARLEDAL F+K D Sbjct: 289 QRY-LNFEKDGKLIPKFLAFSNNAVKD-RDIVKNGYEKVLRARLEDALFFYKED------ 340 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID- 405 L K LD + +L + FH K+G+ ++V R L K+A L Sbjct: 341 --------------LKKKLDDNIEKLK--GIQFHEKLGSMYDKVLRNLELALKLADLTGY 384 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 D + RA++LSKADL TE+V+EF ELQG +G Y+ Q E +I EH P+ Sbjct: 385 KDAEKIKRAVMLSKADLLTEMVKEFDELQGIMGMYYSQKQGEEEEISKSIYEHYLPKTAE 444 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +N+P + ++LADKLDT+I+F I E P S DP+ +RR +GI+R+++E +ID+ L Sbjct: 445 DNIPETNLGTLLALADKLDTVISFIKIGELPKPSADPFGIRRNAIGIVRLLVEKEIDLDL 504 Query: 526 SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + I+D++++ F RL+ YL + + D+I A+L ++ N+ +K L++ + Sbjct: 505 RKVIDDESILDFILSRLESYLQSKGYKTDIINAVLSLKDGNIYRNYLKVKALSQLRNLPD 564 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 E ++ KR+ I+ + K + + L+ + EK LY + + +++K Sbjct: 565 YENVIMVFKRVGNIIPEDFKFS-----NVDVNLLVSQPEKELYKKFIEIKDKFKRFIENK 619 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + LL + I+ FFD V++ V+D ++++NRLSLL+ I ++ + + K++ Sbjct: 620 DYDKALGLLLELKPYIDRFFDNVMIMVEDEKLKNNRLSLLKEINDLFRNIADFTKLI 676 >gi|83719744|ref|YP_441141.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis E264] gi|167617966|ref|ZP_02386597.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis Bt4] gi|257140197|ref|ZP_05588459.1| glycyl-tRNA synthetase subunit beta [Burkholderia thailandensis E264] gi|83653569|gb|ABC37632.1| glycyl-tRNA synthetase, beta subunit [Burkholderia thailandensis E264] Length = 699 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 341/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + ++ + + L +I + +Y TP RL + ++ + +PE+ + E+ Sbjct: 19 PPKALARLSDAFAEGIAQRLAARDLIEGELAFERYATPRRLAVVVQNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + P + + Sbjct: 79 VLPVSVALDAQGKPTAPLAKKLAALGHPNLSIADLERAHDGKAEAFFVNYASPGATLAEG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLSAL-----HDDRIVPVCAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q + Y L + VL R+ AI A+A G + Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHANAYADTLRDKGRVLAHFAGRKEAIRAQLE--ANAGGDQ 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPDE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+Q R+ R+ L +IA I AD + RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSQLARIERLETLAGEIAPAIGADATVAIRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEAEDVAIACSEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVWLLRTTYERFAAVPDV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF +RL+ L +R ++A+L L IV + + EF A+ E Sbjct: 527 AESTDAIHAFFVERLRGLLRERGYTAGEVDAVLSLNPTRLDDIVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L +++ +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPALFVEAAEKALAEQLAEVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDAFFDGVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|328945067|gb|EGG39223.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1087] Length = 679 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 346/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + G L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGGFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DL+ +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 EAFDLNFLDIKSGRTSRGHRFLGKET-EIASADSYEDDLRAQFVIASPLERGDMIVEQIQ 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L+ +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLN--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAVAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLATNLDQLFALSPIIDAFFDHTMVMAEDETVRNNRLALLTSLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|289523166|ref|ZP_06440020.1| glycyl-tRNA synthetase, beta subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503709|gb|EFD24873.1| glycyl-tRNA synthetase, beta subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 691 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 203/722 (28%), Positives = 351/722 (48%), Gaps = 60/722 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI +EEIPAR A E++ I ++E + Y M + TP R+ L L+GL+ Sbjct: 5 NLLFEIGTEEIPARFMPWALEEIKKIADDEFQKERLSYDVMESFGTPRRIALLLRGLAEK 64 Query: 63 SPEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY-LAVLR 114 + IEE GP +A GF +S G+ S +K+ G Y AV+R Sbjct: 65 QEDLIEEIKGPLWSQAFDDYSNPTRAAIGFAKSRGVPVES---LKRQEINGQFYAFAVIR 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R +L +++ ++++ +PK+M W F ++RP++ +LC+ ++ Sbjct: 122 QEGRETLSILPSLLERLVRRLVFPKNMYWMDP-----GFKFVRPIRWLLCLY-----GDE 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + L + NI+ GHRF +++ S D Y+ L + V++D R+ IL+ Sbjct: 172 VVPVKLGNLVGKNISRGHRFLGSSNVEINSADEYLEKLYDNYVIVDHAKRKEKILSGIRA 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + ++ + DL++E + LVE+ FMG+F++++L LPEE++ + +QK F + Sbjct: 232 IERENHVKAMLPPDLVDENVFLVEYPFPFMGTFEERFLSLPEEVLITVMIHHQKYFPLKD 291 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI VSN A+D + +GN RV+ ARL DA+ F+ D Sbjct: 292 DSGKLQPAFIGVSNNMATDM-DVVKEGNERVLRARLSDAVFFYNED-------------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 L KPL R+ L ++V+ +GT ++V R++ + + + + LV Sbjct: 337 ------LKKPLAARVNELQ--NIVYQESLGTLLDKVVRVKDIALHLCKELGYGKEVADLV 388 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA LSKADL T +V EFPEL+G IG+EYA E+ A+ E P + +P + Sbjct: 389 ERAAFLSKADLVTNMVYEFPELRGVIGREYAKANGEHERVARALHEQYLPAFVGDVLPKD 448 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 I + +AD++D +++ ++ P+GS+DPYALRR + +I+ ++D+ L +E Sbjct: 449 VIGAIIGVADRIDNIVSCGKMDLLPTGSQDPYALRRTARCLNELIIGLEMDVDLGSLVEK 508 Query: 532 QNLIL------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +IL F RL + L ++ HD+ L L + L + L Sbjct: 509 AAVILKCEENIGQKVMDFLKQRLYVQLREKGFSHDVATLSLAVIGQRPLQALKLAEKLES 568 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + ++ +A R+ ILA + ++ Y E EK LY IS ++ Sbjct: 569 VRNEEWFQRLATAAVRVRNILAKASALDTG-KGKVDESYFQSEVEKELYHKISVIAPVLR 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ + +I + L + I FF++VLV DD +R NRL+LL + ++ ++ Sbjct: 628 DALKSFDWDRIINSLLELEPIISRFFEEVLVMADDPLLRMNRLALLAECDALFRLIGDLG 687 Query: 700 KI 701 I Sbjct: 688 TI 689 >gi|170691404|ref|ZP_02882569.1| glycyl-tRNA synthetase, beta subunit [Burkholderia graminis C4D1M] gi|170143609|gb|EDT11772.1| glycyl-tRNA synthetase, beta subunit [Burkholderia graminis C4D1M] Length = 700 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 210/716 (29%), Positives = 344/716 (48%), Gaps = 62/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + +K + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAERLAGRDLIEGQLSFERYATPRRLAVTVKNVRTVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P + G + L + G +ISD + +D K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSISDLERAQD-GKAEAFFLRYAAPGATLAE 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L+ + + K+P PK M + S ++RP + + ++++ + Sbjct: 138 GLQAALDETLSKLPIPKVMTYQRPDG--SNVQFVRPAHRLTAL-----HGDQVVPVSALG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 I + T GHRF + +++Q D Y L + V+ + R+ I H LA A G Sbjct: 191 IDADDTTLGHRFLSEGFVQIQHADSYADTLMHKGRVVPNFADRKETIRT--HLLAHADGD 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 QVVMPESLLDEVTSLVEWPVVYACRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ + G I++GN RVV RL DA F+++D+ Sbjct: 309 RFLIVSNIETATPGD-IIEGNERVVRPRLADAKFFFEQDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 KPL R+ L +VV+H K+G+ +R+ R+ L IA LI ADVAL RA L+KAD Sbjct: 349 -KPLADRVPLL--ANVVYHNKLGSALQRMERVEALAGAIAALIGADVALAKRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +P V+LAD Sbjct: 406 LITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPGTATGTVVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------- 528 KL+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + Sbjct: 466 KLETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLAVDFVELLRTAYAQFAAVPN 525 Query: 529 --IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Q + F DRL+ L +R I+A+L L IV + + EF + + Sbjct: 526 VADSTQAIYDFSMDRLRGLLRERGHAPGEIDAVLALNPTRLDDIVARLDAVREFAALPEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KRI IL E N S + P L+ AEK L+A + +Q + + Sbjct: 586 ASLAAANKRISNILKKSE--NASASGGVQPALLVEAAEKALHAQLEQVAPRVQSQLAARD 643 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 YTGALTALAALREPVDTFFNDVMVNAEDPSLRANRLALLGALHQQMNCVADISRLA 699 >gi|116511935|ref|YP_809151.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris SK11] gi|123320411|sp|Q02Z93|SYGB_LACLS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116107589|gb|ABJ72729.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris SK11] Length = 673 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 214/717 (29%), Positives = 345/717 (48%), Gaps = 63/717 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + L E + + + ++ TP RL L ++GLS Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMEAFLNENRLKFDKIIKFSTPRRLALIVEGLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G KGD Y A Sbjct: 61 ESSEAIDEEVKGPSAKIAKDAEGNWSKAIQGFSRGQGATPDDLIL------KGDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HVDGVKAEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ DL ++ + GHRF A I++++ + Y + E VL+D E R+ I Sbjct: 165 EIVAFDLLDVTANRFSRGHRFLANVEIELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENNWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-EHIENVVLGNEKVLVARLEDAEFFWKEDQKL---------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK---IAQLIDADVAL 410 ++ +A+L V FHAKIG+ E ++R +++ K IA L D + Sbjct: 334 ----------KIEDLVAKLG--KVTFHAKIGSITEHMARTKLIAAKLADIAGLTDEEKVD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVAAAIREHYMPTSADGQLPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---- 526 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 527 --QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + ++ F R++ L ++ R+D++EA + N ++ +++ ++ Sbjct: 502 QFEGQNHAEILEFVKARVQKLLLEKLDRYDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + + R ++ EI+P + E+ LY + Sbjct: 562 PFKPAIENVSRSINLVKKAADI-----AEINPALFEEDTEQALYDAVISLQNQWTYKPCE 616 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +++ I H++ IE FFD V+V +D VRDNR++LL + + ++ + I Sbjct: 617 EKFRAIV---HTLAPAIEAFFDNVMVMAEDLAVRDNRIALLSEVVALTSVMADFSLI 670 >gi|325686948|gb|EGD28972.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK72] Length = 679 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I G+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTV---EYITFREINGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGKET-EISSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DGEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +A+ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHIERTGKIAALLAKEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYGLKFDSLSYENQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+ + EK LYA I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINSALFENQEEKDLYAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FF+ +V +D+ VR+NRL+LL + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFEHTMVMAEDKAVRNNRLALLSSLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|313674005|ref|YP_004052116.1| glycyl-tRNA synthetase, beta subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312940761|gb|ADR19953.1| glycyl-tRNA synthetase, beta subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 689 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 212/729 (29%), Positives = 346/729 (47%), Gaps = 69/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LEI +EEIPA + + L L KE + ++ + TP RLF+ + GL+ Sbjct: 1 MSYYFLEILNEEIPADFVNVGIDYLGSAFENLFKENRIPFEKIVADGTPRRLFVLVSGLA 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 H P++ EE +GP A F ++ L + ++ KG+ Sbjct: 61 DHQPDQEEEIVGPPASAAFDAEGNLTNVAMNFAKAKQLDVATLKKVST--PKGEYLSGKR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R +++ V IQ +P+ K+MRW +F + RP+KS + + E Sbjct: 119 FTKGRSTREIISENVAKLIQNIPFKKTMRWGDK-----SFRFARPVKSFISLYDGE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ D+ I N T GHRF IK+ S + Y L+ A V+ + RR I++D Sbjct: 170 -LLPFDIDGIEASNKTAGHRFMWKDSIKIDSPEDYFNRLKNAFVVPERGVRREMIVSDIL 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +++ D+ LL+ + LVE+ +GSF +++L LPEE++ ++K +QK F T+ Sbjct: 229 NIAGQYEVDVDIDESLLDTVTNLVEYPFAVLGSFSEEFLKLPEEVLITSMKNHQKYFYTK 288 Query: 294 T-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G ++N FI +SN + + I +G RV+ ARL+DA F++ D+N Sbjct: 289 NRKNGKISNYFIGISNTKPVN--DNIRKGYERVLRARLKDAAFFFENDKNV--------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 PL+ R+ L VV+ K+GT E++ R R + + + +++ + Sbjct: 338 -----------PLESRVEELK--KVVYQEKLGTSYEKMERFREVSRYLTEVLSLSSEECK 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 L+DR L KADL TE+V EFPELQG +G+EY +Q E I EH P+ + +P Sbjct: 385 LIDRTAYLCKADLMTEMVYEFPELQGVMGREYGRIQGEPQEVYIGIYEHYLPKFSGDKIP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 VS+ADK+DT+ ++I P+G+ DPYALRR ++GII+II + I + + + Sbjct: 445 ETITGAVVSIADKIDTICGCFSIGLIPTGNNDPYALRRNSIGIIQIIRQKSYRIDIDKLV 504 Query: 530 EDQNLIL-----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +L F R K L I D ++A + ++L+ I Sbjct: 505 SKSLNLLKSKVNFDLEKVKDQVMEFIKQRYKQVLISEGIASDAVDASIDL-FNDLIKIEK 563 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L + L++ S KRI IL KK E + + L E E++L I Sbjct: 564 LARTLSDAKGKESFNSIAQSYKRINNIL----KKANHNRSEYNNEILTEEVERKLLDKID 619 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + L + I FFD+V+V V+D VR+NRLS+L +K + Sbjct: 620 GIKNEFMIRLSKEEYAEGLNTLLQLEPYINEFFDKVMVMVEDTNVRENRLSMLCSLKQLF 679 Query: 693 LIVINVQKI 701 + N+ I Sbjct: 680 DKIGNLSMI 688 >gi|303256200|ref|ZP_07342216.1| glycyl-tRNA synthetase, beta subunit [Burkholderiales bacterium 1_1_47] gi|302860929|gb|EFL84004.1| glycyl-tRNA synthetase, beta subunit [Burkholderiales bacterium 1_1_47] Length = 696 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 215/727 (29%), Positives = 362/727 (49%), Gaps = 57/727 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLKG 58 M L+EI +EE+P + ++ + L LKE+ + + Y +P R+ + Sbjct: 1 MASLLIEIQTEELPPKALDNLSKAFAKELAFSLKEQDLALPNAQVTAYGSPRRIAALISD 60 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 +S +P+K ++L P G A+ +++ G++ + K D + Sbjct: 61 VSEVAPDKPFRQKLVPVKVGLDAEGKATPALSKKMKALGIECEPSELKVVNDGKQDQLVY 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 K ++D L+ + A++++P PK M + + ++RP+K ++ + Sbjct: 121 EGTKAGVSLKDGLQIALDHAVRRLPIPKVMSYQLENGK--TVEFVRPVKHLVALF----- 173 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 ++I+ ++L + G T GHRFH PI ++ + Y +E E ++ E R+N ++ Sbjct: 174 DKEIVPVELFGLKAGRETMGHRFHVKEPISIKEAEKYAEQMEKEGKIVASFEERKNKMVG 233 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + A + E++ DL+ E+ L EW V+ FD+++L +P E + LT++ NQK F Sbjct: 234 ELKSAAEKLNAEIIMPDDLVNEVAALTEWPVVYESGFDEEFLTVPAECLILTMQQNQKYF 293 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 R + L N F+LVS I+A DGG AI GN+RVV ARL DA F+ +D+ Sbjct: 294 ALRDKNKKLMNRFLLVSQIEAKDGGEAIRSGNARVVRARLADAKFFYDQDR--------- 344 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 + L+ R+ L VV+H K+GTQ ER R++ + +IA+ I AD AL Sbjct: 345 -----------LQTLESRVPGL--AHVVYHNKLGTQLERSERVQKIASRIAEQIGADPAL 391 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL T +V EFPELQG +G+ YA E+ AI EH +PR + +P+ Sbjct: 392 ARRAAKLAKADLRTLMVGEFPELQGIMGEYYAHHDKEDDKVALAIREHYQPRYAGDELPS 451 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 S+ V+LADK++TL + I + P+G KDP+ALRR LGI+R+++E ++ + L + Sbjct: 452 TPESLAVALADKIETLTGLFGIGQLPTGEKDPFALRRHALGILRMLIEKELPLSLDKLIA 511 Query: 529 -------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 + L FFHDRL++ D+ +E+++ E L + +K Sbjct: 512 IGTEEESVVPGVKDATEELKQFFHDRLRVMQKDQGFTAHEVESVIGSEPAILADVPKRLK 571 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 +++F S + E + KRI IL +K ++ + P L + EK LY I Sbjct: 572 AVHDFMSLPEAESLAAANKRIENIL---KKNTLPLADAVDPALLTEKEEKDLYEAIRTLE 628 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ RY L + P++ FFD+V+VN +D +R NRL+LL + + V Sbjct: 629 PKLEADYKAGRYEDELRSLAPLKAPVDAFFDKVMVNAEDEALRRNRLTLLNELHKAMNQV 688 Query: 696 INVQKIV 702 + + Sbjct: 689 AKLSCLA 695 >gi|158333790|ref|YP_001514962.1| glycyl-tRNA synthetase subunit beta [Acaryochloris marina MBIC11017] gi|189082264|sp|B0CD57|SYGB_ACAM1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|158304031|gb|ABW25648.1| glycyl-tRNA synthetase, beta subunit [Acaryochloris marina MBIC11017] Length = 712 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 201/722 (27%), Positives = 332/722 (45%), Gaps = 78/722 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + + L+E + Q+++ Y TP RL + +GL Sbjct: 1 MATFLLEVGTEELPASFVESAIQQWRSHIPNSLEEHLLTPQSLKVYGTPRRLAILAEGLP 60 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP A KA +GF R G++ I D +++ D +KG+ Sbjct: 61 DQQPDQTVEVKGPPAKAAFKDGKPTKAAEGFARKQGVE-IKDFELR-DTEKGEFIFVQKT 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + DVL ++P I + + MRWS + RP++ ++ +L + Sbjct: 119 TLGKPAVDVLADLIPTWIFSLEGKRFMRWSDGE-----VKFSRPIRWLVSLL-----DDH 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + L+ I + GHR P P+ ++ Y+ LE+A V +DPE R+ I Sbjct: 169 LIPIKLENSTGTISSDRTSSGHRVLHPDPVTIKHPQDYVATLEKASVQVDPEQRQTLIKE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 H A AV + V +DLL E+ LVEW +G F+ ++L LP E+I + ++Q+ F Sbjct: 229 QVHACAKAVKGKAVISEDLLAEVTYLVEWPTAVVGGFESEFLELPAEVITTEMVSHQRYF 288 Query: 291 VTRTREG-VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +G L FI +SN + I GN RV+ ARL D F+K DQ Sbjct: 289 PVEAPKGAKLLPHFITISNGDPA-KSDIISSGNERVIRARLADGQFFYKADQ-------- 339 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV- 408 + PL + + +L+ V F +G+ +V RI+ +A+ + D Sbjct: 340 ------------AMPLAEYLPKLET--VTFQEDLGSVRAKVDRIQANALWVAKQLQLDQK 385 Query: 409 --ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V+RA L KADL T++V EFPELQG +G++YA+ E AI EH P+G + Sbjct: 386 VTQQVERAAQLCKADLVTQMVGEFPELQGVMGEKYAIASGEPTEIATAIVEHYLPKGAND 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + V +AD+LDTL++ + + P+GS DP+ALRRA I+ I+ +D+ L Sbjct: 446 QLPQTLVGQIVGIADRLDTLVSIFGLGMIPTGSSDPFALRRAANAILNIVWAANLDLNLD 505 Query: 527 QF----------------IEDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEND---- 565 Q E Q L FF RL+ L D + I +DL+ A+L + + Sbjct: 506 QLLTETTAAFAQTFAKFQPEVQQLRDFFGQRLRSLLQDEQTIDYDLVNAVLGEKGEHTQR 565 Query: 566 ---NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLL 620 ++L D ++L ++ + + R ++ + + + + + P+ Sbjct: 566 VLVDVLDGRDRAQYLQTIRTNGTLDTIYETVNRAARLATKGDLASDVLDPKGVVQPKLFE 625 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREV 677 +E+ Y + Q + + Y ++ L I + FF D VLV +D ++ Sbjct: 626 QSSEQVFYDGLLTLLPQTQAAQSSRDYQKLVQGLTKIAPSVSQFFDGDDSVLVIAEDADL 685 Query: 678 RD 679 R Sbjct: 686 RA 687 >gi|325697678|gb|EGD39563.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK160] Length = 679 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 341/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + + Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVITSPLERGDMTVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDSKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DSEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ ++L+ + + +V+ Sbjct: 505 RLYELKFDSLSYENQEAVLDFFRARVEKMM-DRSIPKDIVTSVLQSTHFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + ++P + EK L A I Sbjct: 564 LAEKAQEDNFKTAVESLSRVFNLAEKAQG-----HAAVNPALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMDEDEAVRNNRLALLASLTAKAGQMA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|313896142|ref|ZP_07829696.1| glycine--tRNA ligase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312975567|gb|EFR41028.1| glycine--tRNA ligase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 687 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 327/731 (44%), Gaps = 80/731 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI +EEIPA ++ + + E + Y +R TP R+ L + G + Sbjct: 4 DLLLEIGTEEIPAHAMPNLLREMKRLAGEMFTEHRISYDEIRTLGTPRRMALIVTGAAER 63 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP + G KA GF R + + I++D G VY AV + Sbjct: 64 QADVSTETRGPAISIAFDADGNPTKAGAGFARGQHVAP--EALIRRD---GYVYAAV-HE 117 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++LK ++P I+ +P P SMRW F +IRP++ I+ + + + Sbjct: 118 TGAPTAEILKELLPALIRAIPLPNSMRWGDLD-----FRFIRPIRWIVALYGTD-----V 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L E+ GN + GHR AP + S Y E A +++DP RR I Sbjct: 168 VPFTLAEVTSGNRSRGHRTLAPEDFTITSAADYETACEAAYIIVDPVRRRAMISEQIADA 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A A G DLLEE++ LVE+ GSF++KYL LP E + ++ +Q+ F + Sbjct: 228 AKACGGTAEITPDLLEEVLYLVEYPTALSGSFEEKYLALPAEAVITPMRDHQRYFPVKAA 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N + + GN RV+ ARL DA F+ D+ Sbjct: 288 DGSLLPVFITVRNGG-REHLDVVAHGNERVLRARLADAQFFFDEDRK------------- 333 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-LIDAD------- 407 K L + +L VVF +G+ E+ R+ L + + + D Sbjct: 334 -------KSLAEHREKLHT--VVFQQGLGSMYEKTERLARLAAAVVEDMTAGDDAAYETM 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A RA LSKADL T +V EF ELQG +G+EYA+L E AI+E PR + Sbjct: 385 AADARRAAELSKADLVTGMVTEFTELQGIMGREYALLDGEKPEVARAIDEQYMPRFAGDA 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + + +S+ADK+D ++ ++ + P+GS+DP+ LRR LG + +++ ++ I LS Sbjct: 445 LPKSDLGFALSVADKIDNIVGTFSRGKIPTGSQDPFGLRRQALGFVNMLILHESGILLSD 504 Query: 528 FIE----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ ++ F RLK L +R +R+D+ EA+L + D + + Sbjct: 505 LVDEACDLYDLDDAARSKMQADVAEFIRLRLKNVLTERGVRYDVQEAVL-SDVDAVADVP 563 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + + S R+ I + + P + E+ A++ Sbjct: 564 GRAAYVERLLEESDAAALVQSFVRVGNIARSA------PTGAVDPALFAADEER---ALL 614 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + + + + I+ FFD V+V D V+ NRLSLL+ I + Sbjct: 615 AAYEAAAELRAAGGDTAETIAAERRLAVAIDAFFDAVMVMDKDARVKTNRLSLLKSIDDG 674 Query: 692 ILIVINVQKIV 702 +L + + +KIV Sbjct: 675 LLEIADFRKIV 685 >gi|253581996|ref|ZP_04859220.1| glycyl-tRNA synthetase subunit beta [Fusobacterium varium ATCC 27725] gi|251836345|gb|EES64882.1| glycyl-tRNA synthetase subunit beta [Fusobacterium varium ATCC 27725] Length = 690 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 187/728 (25%), Positives = 344/728 (47%), Gaps = 73/728 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE+PAR ++A +DL L LK+E + ++ ++ Y TP RL L + L Sbjct: 3 LLFEIGMEELPARFLNQALKDLKNNLETKLKDERISFKGIKTYGTPRRLVLEVCELGEQQ 62 Query: 64 PEKIEERLGPRVGAGK-------KAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + +GP +A GF +S G++ D +I P KG+ A Sbjct: 63 EDLNIVNMGPAKNIAYGSNGEISRAGLGFAKSQGIEA-EDLEIISTP-KGEYIAARKFMK 120 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +++L I+ + ++ + KSM WS + RP++ L + +++ Sbjct: 121 GKETKELLPEILKSLVLELNFQKSMTWSDKK-----LRFARPIQWFLAL-----CDNEVV 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +++ + GN + GHRF +V ++D Y + E V++D E R+ I + Sbjct: 171 KFEIEGMESGNKSRGHRFFGKE-FEVNTIDEYFEKIRENNVIIDIEERKALIKKLINENC 229 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G +++ + +LL E+ L+E+ +GSF+ +L +P+E++ ++++ +Q+ F Sbjct: 230 TNSGEQVLVEDELLAEVTNLIEYPCPIVGSFNSDFLEVPQEVLIISMEVHQRYFPILDSN 289 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L F++V N + + +GN +V++ARL DA F++ D Sbjct: 290 GKLLPKFVVVRNGV--ETSEQVRKGNEKVLSARLADARFFYQED---------------- 331 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PL + +L VVF +GT ++ R + K + + + + R Sbjct: 332 ----LKSPLADNVEKLKT--VVFQKDLGTIYSKIERATEIAKYLIDTLGYNDRKDSILRT 385 Query: 415 IVLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ E F +LQG +G +YA+ E I+EH PR +N+PT Sbjct: 386 VFLAKADLVSNMIGEKEFTKLQGFMGADYALKSGEGEKVSLGIKEHYYPRFQGDNLPTEL 445 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED- 531 I ++D++DTL+ + + PSGSKDP+ALRRA LGI+ +IL ++++I L E Sbjct: 446 EGIVAGISDRIDTLVGCFGVGVIPSGSKDPFALRRAALGIVNVILNSQLNISLKALTEKA 505 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 ++ FF R + D++ A+L ++DN + ++ Sbjct: 506 LDALQGCGVLKRDRETVLAEVLEFFKQREMNIFTEMKFGKDIVTAVLNTDSDNAVEALEK 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 IK L F + E L KR+ I EK I+ E LY + Sbjct: 566 IKTLETFAKEEEFETLLPVLKRVGNISKDHEKGI------INQDLFKEPVETELYNFSLE 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + +++++K Y + + S + I +FD+V+V D +V++NRLS L+++ ++ + Sbjct: 620 LNSKVIDALNNKNYDKYLQAIVSGKDIINKYFDEVMVMDKDEDVKNNRLSQLKFLADLFI 679 Query: 694 IVINVQKI 701 + ++ +I Sbjct: 680 KMADLNQI 687 >gi|327467244|gb|EGF12748.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK330] Length = 679 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 209/725 (28%), Positives = 341/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGKET-EISSADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ F+ R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFIVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+ Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAHLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQDTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+ + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINSALFENQEEKDLAAAIEAVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|327459311|gb|EGF05657.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1] gi|327472736|gb|EGF18163.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK408] Length = 679 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 211/725 (29%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEVGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ R + I+ Sbjct: 169 QAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVIASTLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L + + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHDVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 HAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FFH R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYDNQEAVLDFFHARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + I+P + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAINPALFENQEEKDLAAAIESVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + + Sbjct: 619 -------TSDLAANLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLASLTAKVGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 KFNQI 676 >gi|297584640|ref|YP_003700420.1| glycyl-tRNA synthetase subunit beta [Bacillus selenitireducens MLS10] gi|297143097|gb|ADH99854.1| glycyl-tRNA synthetase, beta subunit [Bacillus selenitireducens MLS10] Length = 698 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 185/718 (25%), Positives = 331/718 (46%), Gaps = 70/718 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PAR + A +L+ L ++ + Y ++ + TP RL + + G+S P++ +E GP Sbjct: 16 PARFVNGAMNELAKRTEAFLSDKQIDYDDVNMFATPRRLAVKVNGVSTKQPDQEKEAKGP 75 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF + Q + K+ K + A L + +L Sbjct: 76 AKKIALDEEGNWTKAAIGFAKGQ--QVNEEDLFFKEVKGVEYVYAKLYIEGQETLQLLSG 133 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 + I +P+PK+MRW + + RP++ ++ + E++I L++ + Sbjct: 134 -LHDVITGIPFPKNMRWGSHE-----MRYARPVRWLVAMY-----GEEVIPLEIAGVMAS 182 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 N+T GHRF + Y L V+ DP R++AI N +AS ++ D Sbjct: 183 NVTQGHRFLGQAA-TLNHASDYEHALLSQHVVADPFSRKDAIKNQIQDIASEQEWQIPMD 241 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LLEE+ LVE+ GSFD+++L +P+ ++ +++ +Q+ F + + G L F+ V Sbjct: 242 EGLLEEVTQLVEYPTALFGSFDERFLAVPDRVLITSMREHQRYFPVQDQSGSLLPYFVTV 301 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N + +GN +V+ ARL+DA F+ D+ + L+ Sbjct: 302 RNGDHR-HLETVQKGNEKVLRARLQDAEFFFNEDKKHA--------------------LE 340 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 +L +V+H +GT ++V R++ L +KI ++ D A ++RA LSK DL Sbjct: 341 DNFEKL--HQIVYHEDLGTIADKVDRVQTLAEKIGSMLSLDSASKTAINRAARLSKNDLV 398 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T++V EF EL+G +G+ YA+ E AI EH P+ + VP+ +S+ADKL Sbjct: 399 TQMVNEFTELEGYMGEVYALKSGETPEVATAIREHYLPKQSGDPVPSGIEGAVISVADKL 458 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL------- 536 DT+ +++ P+GS+DP+ LRR T I++I + + + L++ IL Sbjct: 459 DTIAAHFSLGNIPTGSQDPHGLRRQTAAIVQIFRDFEWTLSLNELFNAAQDILQEKNLQK 518 Query: 537 ------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 F R K L + IR+D+++A+L E DN+ + LN+ A Sbjct: 519 RNQAEVLRDFNQFVTLRYKNILQESGIRYDVVDAVLAFETDNVPLVFKKAAFLNDKLGDA 578 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 ++ + + R+ I + ++ + EI + E LY I +S+ Sbjct: 579 SFKEDVEAFSRVTNIASKKQGS----AEEIDQDLFESDLEVNLYQDYERIKPVIIKSLRD 634 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L I +FD ++V DD ++R+NRL+ + + ++ ++ + Q IV Sbjct: 635 MKPEAAYQALREAAPSIHKYFDGIMVMTDDEQIRENRLTQMSQLAALVRMIADFQSIV 692 >gi|303245471|ref|ZP_07331755.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio fructosovorans JJ] gi|302493320|gb|EFL53182.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio fructosovorans JJ] Length = 697 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 193/730 (26%), Positives = 323/730 (44%), Gaps = 64/730 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FL EI EE+PAR E+ + L + + + + TP RL + + L+ Sbjct: 1 MPHFLFEIGFEEMPARFLAGLTEEARALFSEELAQVKLGSDAVAAFATPRRLVVSIPELA 60 Query: 61 PHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 SP + E GP G A GF + G + +KG Sbjct: 61 EASPREEEVVTGPPERVGFDASGNPTPAASGFAKGQGKDVADV--FVMETEKGRYLALRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++L I ++K+ +PK MRW + F++ RP+ L +L + Sbjct: 119 TVGGETAMNLLPGICQDVVKKLSFPKRMRWGSRE-----FAFGRPVHWFLALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDA 232 ++ L +I G T GHR P P + + Y + + V+LD R + + A Sbjct: 169 AVVPFRLDDIASGRETRGHRIMGPGPFSIATAKDYFAVIRDQGKVILDAREREGMVRSQA 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +LA+ G V + LL E+ GL E V +G FD K+L +P E++ +++++QK F Sbjct: 229 EKLAAEAGGTAVINPTLLMEVTGLTEHPVVVLGRFDPKFLDVPREVLITSMESHQKSFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + +G L F+ + +D + +G RV+ ARLEDA FW+ D Sbjct: 289 QDGKGGLLPVFLTTLGLMPAD-LELVRRGWQRVLTARLEDARFFWEAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L ++ +L+ VVF A +G+ ++ R+ L +A+L +++ Sbjct: 336 --------LGTDIETWQKKLE--SVVFLAGLGSMRDKARRLERLCGVVAELSGKPEIMLE 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +A LSK DL + +V EF ELQG +G Y + ++ + A+ E P GP VP Sbjct: 386 ASQAGGLSKVDLVSTMVGEFAELQGIMGGIYVRRKGQSETVSRAVGEQYLPAGPDSPVPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +S+ADK DTL + + P+G+ DPYALRRA LGI RI++E+ + L + ++ Sbjct: 446 TLAGAILSVADKADTLAGCFGNDMAPTGAADPYALRRAALGICRIVIEHGLRFDLMELLQ 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L+ FF RL+ Y R ++EA + ++ + + Sbjct: 506 AAIDGYGDLKFKVDRTHLLAKLLDFFGQRLRAYFTGRGFDTLVVEAAVGASFTDIAALAE 565 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVI 631 + L F ++ + +L+ KR I+ + +S I P+ L +AEK L A Sbjct: 566 RVAALAAFAATPDFGQAVLTFKRAANIIRKQGVGAGVPLSGAIKPELLEEQAEKDLAAAC 625 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Y + D+L+ + ++ FFD V+V D +VR NRL+LL+ + + Sbjct: 626 EAVFPRYDALFHAGDYAAVLDVLYELRPTVDAFFDNVMVMCDAMDVRLNRLNLLKALVDR 685 Query: 692 ILIVINVQKI 701 + V + + Sbjct: 686 LGRVADFAAL 695 >gi|302036970|ref|YP_003797292.1| glycyl-tRNA synthetase subunit beta [Candidatus Nitrospira defluvii] gi|300605034|emb|CBK41367.1| Glycyl-tRNA synthetase, beta subunit [Candidatus Nitrospira defluvii] Length = 724 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 211/738 (28%), Positives = 357/738 (48%), Gaps = 78/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EE+P + A L LLK+ + Y +R TP RL L ++GL+ Sbjct: 21 ELLLEIGTEELPYQFVAPAMRALQQSTETLLKDLRLTYGAVRTMGTPRRLVLLIEGLARQ 80 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++E +GP G +A GF G+ + D Q+++ P KG+ AV ++ Sbjct: 81 QASAVKEAMGPSKSVAFDQNGQPTRAAVGFAAGQGI-PVEDLQVRQTP-KGEYLFAVKQE 138 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + + VL +P + K+ +PK+M W+ + + RP++ ++ + K+ Sbjct: 139 KGQAVAAVLIQALPQLLGKLSFPKAMHWN-----QTGVRFARPVRWLVALCGG-----KV 188 Query: 176 IDLDLKEIPCGNITYGHRFHA-----PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 + + I GN+++GHR P V+S+ HY+++ E V++D E RR IL+ Sbjct: 189 LPIQFATIKAGNLSHGHRVLGAKVSSPKGFAVKSIAHYLKETERHGVIVDQERRRTMILD 248 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 LA + L +D DLLE+ + +VE +GSF YL LP+E++ ++K +Q F Sbjct: 249 QLASLAKSARGHLHQDDDLLEQAVYMVESPLTILGSFKPHYLSLPKEILMTSMKEHQGYF 308 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 ++G L F+ V+N++ S+ I +GN RV+AARL DA F+ D+ Sbjct: 309 SLVDQKGALLPNFLAVTNMKLSNM-QLIREGNERVLAARLADAKFFFDEDRK-------- 359 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--V 408 L R+A+ L V FH K+G+ ++ R+ + +A + + V Sbjct: 360 ------------TSLIDRVAK--QLAVTFHQKLGSLHQKTQRVVAMAAHVAGQLGDERLV 405 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA LSKADL T IV EFP LQG +G EYA E+ AI E PR + Sbjct: 406 QDCRRAAELSKADLLTGIVGEFPTLQGLMGGEYAKHDGESPVVSAAIREQYMPRAMEGEL 465 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +SLAD+LD++ F+ + PSGS+DP+ALRR I+RI++E+K+ + L+Q Sbjct: 466 PESLAGKVLSLADRLDSIAGFFLVGLVPSGSEDPFALRRHATAIVRIVIESKLRLNLAQA 525 Query: 529 IEDQNLIL---------------------FFHDRLKLYLHDRD-IRHDLIEAILRPEND- 565 + +L F +R++ Y +R D++EA+L+ + Sbjct: 526 VRAAQDVLSGQNVAAAPQSGKAGAPDVIGFLFERVRFYGKSAHQLRDDVMEAVLKSADRQ 585 Query: 566 --NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +L + D +K L + A+ + ++ KR ++ E+ + + A Sbjct: 586 TIDLTDLFDKMKALQQITVRAEFDPLIVGFKRAHRLTEKEQWDRKP----VESGLFREAA 641 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E L+ + +M +Y + D+L + PI+ FF+ V+VN +D VR NRLS Sbjct: 642 EPALHQTVQSSHQEYAAAMGGGKYGEALDVLVRMKGPIDDFFNAVMVNAEDPAVRGNRLS 701 Query: 684 LLQYIKNIILIVINVQKI 701 LL+ + ++ + + +I Sbjct: 702 LLKSVDDLFMSFADFSQI 719 >gi|30249172|ref|NP_841242.1| glycyl-tRNA synthetase, beta subunit [Nitrosomonas europaea ATCC 19718] gi|81838735|sp|Q82VB0|SYGB_NITEU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|30180491|emb|CAD85097.1| Glycyl-tRNA synthetase, beta subunit [Nitrosomonas europaea ATCC 19718] Length = 715 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 204/731 (27%), Positives = 350/731 (47%), Gaps = 74/731 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIE-ER 70 P + K + ++ LK + + + + + +P RL ++L + +P+++ + Sbjct: 16 PPKSLDKLGNAFAAVIADSLKSQNLTTPDTILTAFASPRRLAVHLTAIPAQAPDQVVALK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + G++ + +K+ K ++ L+ Sbjct: 76 LMPITVGLDAQGQPTPALHKKLAALGMENVDASALKRVQESKAEMLFLEQNVTGILLAAG 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI+++P K M + ++RP+ ++ + +KII + + Sbjct: 136 LQKAMEDAIRQLPVSKVMTYQ-LDDGWENVHFVRPVHGLIAL-----HGQKIIPVSAFGL 189 Query: 184 PCGNITYGHRFHAPH-PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGL 241 GN T GHRF + + D Y LE E V+ + RR+ I ASAV L Sbjct: 190 TAGNTTRGHRFEVKQTELIIDHADRYASLLETEGAVIPGFDRRRSWIREGLEAAASAVQL 249 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 + D+ LL+E+ LVE+ + MG+F +L +P+E + T+K NQK F +G L N Sbjct: 250 RCISDEVLLDEVTALVEYPNILMGAFPTDFLEVPQECLISTMKINQKYFPLLDTDGKLTN 309 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++V+NI +D G I+ GN RV+ +RL DA F+ D+ Sbjct: 310 QFLIVANITPADPGQ-IISGNERVIRSRLADAKFFFDHDRK------------------- 349 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAIVLSK 419 + L R+ LD V++H ++G+QGER ++ L + I +L+ D D+A +L+K Sbjct: 350 -RTLASRLPDLD--KVIYHHQLGSQGERTRYVQTLARIIGRLLGDDNLAGQADQAAMLAK 406 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL T++V EFPELQG +G+ YA + + + AIE+H KPR + +P + I V+L Sbjct: 407 ADLLTDMVGEFPELQGIMGRYYARFEGMDETIAFAIEDHYKPRFAGDVLPRSMAGICVAL 466 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--- 536 ADKL+TLI+ ++I + P+G KDPYALRR LG+IRI++E + I L I +L Sbjct: 467 ADKLETLISLFSIGQLPTGDKDPYALRRHALGVIRILIEKNLPIGLDVLISRAADVLQDE 526 Query: 537 -------------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 FF+DRL L D+ +EA+L L I Sbjct: 527 MIGKQDSGPGHARPVTPQLVGQLQDFFYDRLAASLRDQGYTAQEVEAVLNLRPSLLCEIP 586 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + F + + + KR+ IL +K + ++ I L AE LY + Sbjct: 587 RRLAAVRAFAALPEAASLAAANKRVGNIL---KKSECDATVAIDEACLQASAEITLYRAL 643 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 S+ + +++ + Y +L ++ P++ FFDQV+VN ++ +R NRL+LL ++ Sbjct: 644 SEIESDARQAFQNGDYVTALQILAALKAPVDAFFDQVMVNDENEALRRNRLALLMALQAT 703 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 704 MNRVADISRLA 714 >gi|171464147|ref|YP_001798260.1| glycyl-tRNA synthetase, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193685|gb|ACB44646.1| glycyl-tRNA synthetase, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 712 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 206/735 (28%), Positives = 355/735 (48%), Gaps = 67/735 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGL 59 L+E+++EE+P + + + S + LK G+ ++ + + TP RL + + + Sbjct: 11 ATLLIEVFTEELPPKSLRRLGDAFSEGIFAALKSAGLATKSSKVTGFATPRRLAVQVTDV 70 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 +P+ + E+L P G + L + G + ++K K + Sbjct: 71 LDQAPDFPVREKLLPTSNAFDAEGKATAPLLKKLSALGYADVDLSSLEKAGEGKNEALYL 130 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWS--TTHSPISAFSWIRPLKSILCILVAE 169 + +E + + + K+P K M + ++ + RP I+ + Sbjct: 131 NVIAKGAALEQTAQVALEQTLNKLPIAKMMHYQVPQKDGQLADVQFARPAHRIIAL---- 186 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAI 228 + I+++ I GN T GHRF AP + + + + Y DL+ +A V+ RR I Sbjct: 187 -HGDTILNISALGIHAGNKTEGHRFLAPGNVAIGNANQYESDLQSKAKVIPSFNQRRAKI 245 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + A ++ LL+E+ LVEW ++ FD+++L +P+E + LT++TNQK Sbjct: 246 EAAILKAAGDD--LVLMPDSLLDEVTALVEWPAIYECHFDQEFLEVPQECLILTMQTNQK 303 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F R+G L N F++VSNI+ + A I+ GN RVV RL DA F+++DQ Sbjct: 304 YFALTDRQGKLRNRFLIVSNIETNKPNA-IISGNERVVRPRLSDARFFFQQDQK------ 356 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 +PL R+A L VV+H ++G Q +R R++ L IA+ ++AD Sbjct: 357 --------------RPLASRVANLG--KVVYHNQLGNQLDRTRRVQGLTVGIAKKLNADE 400 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L RA ++K DL T +V EFPELQG +G+ YA EN A EH P+ + + Sbjct: 401 KLASRAAEIAKTDLLTNMVGEFPELQGIMGRYYATHDGENADVASACSEHYMPQFASDAL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TL+ W + P+G+KDPYALRR LGI R++LE + + L + Sbjct: 461 PQTQTGTILAIADKLETLVGIWGVGLAPTGNKDPYALRRHALGICRLLLEKNLSLSLPEL 520 Query: 529 IE----------------DQNLILFFHDRLKLYLHDRDIR-----HDLIEAILRPENDNL 567 IE ++ F DRL+ YL D+ + I+A+L E L Sbjct: 521 IELSRAQFPQADVQEKAKAADIYAFIIDRLRAYLRDQSVAGKAFTSAEIDAVLSQEPAQL 580 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 +++ + L EF + A+ + + KRI IL +K I + S + L + AE L Sbjct: 581 NDLIERLTALREFNALAEAAQLAAANKRISNIL---KKTTTAIPVTCSAKLLQIPAETAL 637 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + + + + +++ ++ L ++ PI+ FF V+V + E+RDNRL+LLQ Sbjct: 638 HQALETVAPALNAAYEKRQFVELLRSLVALSGPIDQFFADVMVMDPNSELRDNRLALLQQ 697 Query: 688 IKNIILIVINVQKIV 702 + + +V ++ K+ Sbjct: 698 LHQKMNLVADLGKLA 712 >gi|107023637|ref|YP_621964.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia AU 1054] gi|105893826|gb|ABF76991.1| glycyl-tRNA synthetase beta chain [Burkholderia cenocepacia AU 1054] Length = 699 Score = 670 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 338/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +P+K + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELVFERYATPRRLAVVVQNVRAVAPDKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNASIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++++ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLHTAHARFAGVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRVPVDTFFNDVMVNAGDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|319778496|ref|YP_004129409.1| Glycyl-tRNA synthetase beta chain [Taylorella equigenitalis MCE9] gi|317108520|gb|ADU91266.1| Glycyl-tRNA synthetase beta chain [Taylorella equigenitalis MCE9] Length = 706 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 219/741 (29%), Positives = 377/741 (50%), Gaps = 75/741 (10%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV------IYQNMRQYWTPHRL 52 M + L+E+++EE+P + +E + ++ L + + ++ + TP RL Sbjct: 1 MSNQSLLIELFTEELPPKALRNLSEVFASEIVKGLVKINLLEGDSESHEKYTVFATPRRL 60 Query: 53 FLYLKGLSPHSPEK-IEERLGPRV------GAGKKAIDGFLRSTGLQ--TISDCQIKKDP 103 + ++ + PE+ E+L P+ G A+ L S G+ +SD Q+K D Sbjct: 61 AVLVRDVLDVGPEQPFTEKLMPKKVGLDSEGNATAALTKKLESKGMGNFAVSDLQVKSDG 120 Query: 104 KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSIL 163 K+ +YL+ + R ++ L+ I A+ +P PK MR+ S ++RP+ ++ Sbjct: 121 KQDYLYLSGINA-GRSLKADLQAIFQHAVDSLPIPKVMRYQLADGKTS-VKFVRPVHGLV 178 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPE 222 + +E +ID+ I N+T+GHRF + +V S D Y + L +E MV+ Sbjct: 179 AMHGSE-----VIDISAFGINSSNVTHGHRFMGKYSFEVSSADSYEKQLLDEGMVVASYS 233 Query: 223 CRRNAILNDAHRLASAVGLEL---VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 R N I + ++S +GL L E +L+EE+ LVE+ ++++G F++K+L +P E + Sbjct: 234 ERMNYISSKLESISSELGLNLGSGDEVNNLIEEVTSLVEYPEIYVGEFEEKFLQVPSECL 293 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 LT++ NQK F +G L+N F++VSN++ S+ + I++GN RVV RL DA F++ Sbjct: 294 ILTMRLNQKYFPLFNPDGSLSNKFLIVSNMKVSNP-SNIIEGNQRVVRPRLADAEFFYET 352 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ +Q + L VV+H KIG+Q ERV RI + K Sbjct: 353 DKKL--------------------SFEQMLEPLKT--VVYHNKIGSQFERVERIEKIAKF 390 Query: 400 IAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 +A + AD +L RA +LSKADL + +V EFPELQG +G Y+ LQ E DAI++ Sbjct: 391 LASKLGADESLASRAALLSKADLSSNMVGEFPELQGIMGSYYSKLQGEPEEIYDAIKDQY 450 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-- 517 K + E + S+ + LAD+++TLI W I P+G +DPY LRRA LG+I I Sbjct: 451 KLKFDREYSNKSVTSLALYLADRIETLIGIWGIGSAPTGERDPYGLRRAALGLISAIESL 510 Query: 518 ---ENKIDIPLSQFIEDQNLI-------------LFFHDRLKLYLHDRDIRHDLIEAILR 561 EN+ + LS+ + + +F +DRLK L++ L++++L Sbjct: 511 SGSENENSLNLSEILHFAQTLFSDIPKSTAIEVEVFIYDRLKNQLYN-TYSKQLVDSVL- 568 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 ++ +V IK L++F +++ + KRI IL +K N ++ I Sbjct: 569 TNKTHINDVVPRIKALSDFSKTSEASSLATANKRISNIL---KKINYQLP-AIDKTLFKA 624 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 EAEK LY ++ K Y+++ L ++ + ++ FF+ V+V +D +R+NR Sbjct: 625 EAEKNLYESYVQIKDELKSKFTSKNYNEVFLKLSTLRDSVDKFFEDVMVMDEDIAIRNNR 684 Query: 682 LSLLQYIKNIILIVINVQKIV 702 L+LL+ + + +V ++ + Sbjct: 685 LALLKELHEHMNLVADISLLA 705 >gi|289434740|ref|YP_003464612.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170984|emb|CBH27526.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 688 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 199/731 (27%), Positives = 342/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + E L + L+E + + ++ + +P RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVEQLKKRMRDWLEENQIAFAEIKTFSSPRRLTVLVEDM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S ++ + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKIEPAD---LTFREIKGVEYIYI 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ L + + + +P SM W +IRP+K ++ + E Sbjct: 118 KKEVIGEKTTALLPALQKVVTSMTFPVSMHWGNND-----LRYIRPIKWLIAMFGQE--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 II ++ + N + GHRF ++ Y L E V++D R+ AI Sbjct: 170 --IIPFEITGVTTSNTSRGHRFLG-KTTTIKQPSDYQNALLEQFVVVDATERKEAISGQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LAS ++ ED DLLEE+ LVE+ V G+F+++YL LPEE++ T+K +Q+ F Sbjct: 227 KELASLENWQIKEDADLLEEVTNLVEYPTVLAGNFEEEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQDGKLLPHFVTVRNGN-HENIETVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L + + +A+L ++VFH K+GT E++ R++ + IA +D AD Sbjct: 334 --------LKMTIAEAVAKL--PNIVFHEKLGTLTEKMKRVQKVALMIADYLDWKEADKE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T +V EFPELQG +G++YA+LQ E + AI EH P+ +P Sbjct: 384 DIIRLTDIYKFDLVTNVVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPKSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +++ADKL+T + F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSLIAIADKLETFVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLELL 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L + IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERAEGAVELPSDDVKREVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 VD + LN+ S + + R+ I E+ +E+ P E E L+ Sbjct: 564 VDRAQILNKHVESEWFRPTVEALTRVLNISKKYEE-----GVEVDPALFENEYEHALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYASLTILER----LKAFAGLRTTIDDYFDNTLVMSDNLELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|302343407|ref|YP_003807936.1| glycyl-tRNA synthetase, subunit beta [Desulfarculus baarsii DSM 2075] gi|301640020|gb|ADK85342.1| glycyl-tRNA synthetase, beta subunit [Desulfarculus baarsii DSM 2075] Length = 695 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 210/730 (28%), Positives = 329/730 (45%), Gaps = 66/730 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV----IYQNMRQYWTPHRLFLYL 56 M + L EI EE+PAR E ++ + +L EG+ ++ + P RL L+ Sbjct: 1 MAELLFEIGCEEMPARFVAPGIEQMAALGAEMLVREGLCASPDAAQVKAFGAPRRLALWA 60 Query: 57 KGLSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVY 109 + L+ P++ E+ LGP G KA GF +S G++ S I D KG Sbjct: 61 RNLAAIQPDRQEQVLGPPKANAYDQNGEPTKAALGFAKSQGVELTSLTFI--DTDKGPRL 118 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 V R VL ++ ++ + + KSMRW + F + RP+ + + Sbjct: 119 GYVKTIAGRPAMAVLPELLVKLVESLHFAKSMRWGSEK-----FRFARPIHWFVALFDG- 172 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +++ L++ + G+ T GHRF AP I+V+ + Y+ L +A VL+D R A Sbjct: 173 ----QVVPLEITGVKSGDQTRGHRFMAPQAIQVRGGEDYLTKLRQAHVLVDRPERIEATR 228 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A+ G L+ D+ LL E LVE GSFDK++L +P E++ ++ +Q+ Sbjct: 229 QQVAQAAAQAGGRLLADEALLLENADLVEQPTACWGSFDKQFLEVPREVVITAMREHQRY 288 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +G L FI V+N D A + G+ RV+ ARL DA F D+ Sbjct: 289 HSLEDDQGRLLPAFIAVNNTTPRD-LAVVANGHQRVLRARLADARFFLDEDRK------- 340 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-V 408 +PL + L +V +HAK+G+ ++V R+ L +AQ + + V Sbjct: 341 -------------RPLADYLGDLQ--NVTYHAKLGSSFDKVQRVIDLAVWLAQRLAPELV 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL T +V EFP LQG IG EYA E+ AI EH +P G + Sbjct: 386 EPTRRAAQLAKCDLVTGMVGEFPSLQGVIGAEYARRDGEDPQVATAIAEHYQPVGADAPL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P I V LAD++DT+ + + E P+G+ DPYALRRA + ++R+++E + I LSQ Sbjct: 446 PKGMIGALVGLADRIDTICGLFGVGEAPTGAADPYALRRAAIAVLRLLMEKNLTISLSQT 505 Query: 529 IEDQ-----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + FF RL + + D+ +A+L D+ + Sbjct: 506 LAQALAGLAGRLSAADQTVADEVTKFFAARLAGLMAEAGAPTDVAQAVLAAGLDDPGAAM 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 K L S KR+ IL E + S P + +EAE++L + Sbjct: 566 ARAKALAAVKDSPDFAPLAAGMKRVMNILKKE--AAQVPSHAPDPALMTIEAERQLRQAV 623 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 Q Y Q L + PI+ FFD VLV +D+ VR NRL+LL+ + + Sbjct: 624 LAVADEAQALFASGDYAQFLRRLSELKGPIDAFFDGVLVMDNDQAVRQNRLALLESVARL 683 Query: 692 ILIVINVQKI 701 + + Sbjct: 684 FRGLAEFTYL 693 >gi|113477880|ref|YP_723941.1| glycyl-tRNA synthetase subunit beta [Trichodesmium erythraeum IMS101] gi|122964408|sp|Q10WA6|SYGB_TRIEI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|110168928|gb|ABG53468.1| Glycine--tRNA ligase [Trichodesmium erythraeum IMS101] Length = 719 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 209/749 (27%), Positives = 348/749 (46%), Gaps = 84/749 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FLLEI +EE+PA ++A + ++ LKE + ++ Y TP RL + + L Sbjct: 4 TFLLEIGTEELPANFVYEAIQQWQELIPMTLKEAFLTNDSVNVYATPRRLAVVIDALPTK 63 Query: 63 SPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P++ EE GP A KA +GF + G+Q ++D QI KGD + Sbjct: 64 QPDREEEIKGPPAKAAFKDGKPTKAAEGFSKKQGVQ-LNDLQICTTE-KGDFVFVNKKIQ 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +L ++P I K+ + MRW+ + RP++ ++ +L ++I+ Sbjct: 122 GKPTAAILTELIPKWIDKLEGKRFMRWADGE-----LKFPRPIRWLVALL-----DDEIL 171 Query: 177 DLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++L I +YGHR P I++ +Y+ L++A + +D + R++ I Sbjct: 172 PINLDNGSQKITSDRFSYGHRVLHPKLIEISQAKNYVEVLKKAYIEVDYKQRKSKIEQQI 231 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A + + ++LL E+ LVEW V +G FD+++L LP E+ ++T+Q+ F Sbjct: 232 KTAAEEIKGKAEISEELLAEVTNLVEWPTVVIGKFDEEFLILPGEVTTTVMETHQRYFPV 291 Query: 293 R-----TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L FI +SN + I GN RV+ ARL D F+K D Sbjct: 292 FKSTKTFKDMELLPYFITISNGDP-EKSEIIAIGNERVIKARLADGQFFYKTD------- 343 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-- 405 L+KPL+ + L+ V F AK+G+ E+V RI + K IA + Sbjct: 344 -------------LAKPLESYLPELET--VTFQAKLGSMREKVKRIVSIAKLIAGQLQIT 388 Query: 406 -ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 + ++RA +L KADL T++V EFPELQG +G++YA E + AI EH PRG Sbjct: 389 QEESKNIERAALLCKADLVTQMVYEFPELQGVMGEKYARAAGETEAVATAIFEHYLPRGA 448 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P +SLAD+LDTL++ + + P+GS DP+ALRRA G++ I + + Sbjct: 449 GDILPKTISGQVISLADRLDTLVSIFGLGMLPTGSADPFALRRAANGVVNISWSANLPLN 508 Query: 525 LSQFIED-----------------QNLILFFHDRLKL-YLHDRDIRHDLIEAILRPEN-- 564 L Q +E+ L F R+K L +++I +DL+ A+L + Sbjct: 509 LHQLLEEIATNFFKTYSQTNSDLLAQLSNFLLQRIKTILLEEKNIDYDLVNAVLGDNDAE 568 Query: 565 ------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE--KKNREISLEISP 616 +LL + + L + K + R ++ A E K + I Sbjct: 569 YKERGLKDLLDVRNRAIFLQNIRQNGMLGKIYETINRSTRLAAQGELDKIQLKPLKVIDS 628 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVD 673 + E+E Y + + + S + Y Q+ D L I + FF D VLV Sbjct: 629 KLFKSESELAFYNALVELVPQTEISQKTRNYQQLVDALLKIAPTVSNFFDGPDSVLVIDP 688 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKIV 702 D +++ NRL+LL ++N ++ + +IV Sbjct: 689 DPKIKKNRLNLLGLLRNNARVLADFGQIV 717 >gi|296445406|ref|ZP_06887364.1| glycyl-tRNA synthetase, beta subunit [Methylosinus trichosporium OB3b] gi|296257167|gb|EFH04236.1| glycyl-tRNA synthetase, beta subunit [Methylosinus trichosporium OB3b] Length = 778 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 278/657 (42%), Positives = 384/657 (58%), Gaps = 31/657 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AA+DL ++ G L E G+ Y+ + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQRQAADDLQRLVCGALAERGLAYEGAASHATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EE+ GPRVGA + AI GFL+S GL +I + +I+KDPKKG+ Y+AV+ + R Sbjct: 61 ARQPDVREEKKGPRVGAPEAAIAGFLKSAGLASIDEAKIEKDPKKGEFYVAVIERAGRET 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 VL ++P ++ PWPKSMRW + + + W+RPL+SIL E +++ + Sbjct: 121 IQVLADVLPGVVKGFPWPKSMRWGAASAKLDSLRWVRPLQSILATFGPETETPEVVRFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN+ +GHRF AP V+ D Y LE+A V+LD RR+ +L+DA LA A G Sbjct: 181 DGIESGNVAFGHRFMAPQGFSVRRFDDYAPALEKAKVVLDAARRRDIVLHDARTLAMAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVED LLEE+ GLVEW MG+FD+ +L +P E+IR TI+ NQKCFV + +G LA Sbjct: 241 LELVEDAALLEEVAGLVEWPVTLMGAFDESFLSIPPEVIRATIRVNQKCFVLKRADGGLA 300 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N FILV+N++A+DGGA IV GN RV+AARL DA F++ D Sbjct: 301 NKFILVANVEANDGGATIVGGNQRVIAARLSDAKFFYETD-------------------- 340 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L L++R+ +LD ++VFH K+GTQGERV+RI L +++A LI AD +RA L+KA Sbjct: 341 LKTKLEERLPKLD--NIVFHEKLGTQGERVARIAALARELAPLIGADADKAERAARLAKA 398 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EFPELQG +G+ YA Q E+ A+E+H KP+GP + +PTN +SI V+LA Sbjct: 399 DLVTEMVGEFPELQGLMGRYYARAQGEDADVAAALEDHYKPQGPNDRIPTNPVSIAVALA 458 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRI LE+++ +PL ++F Sbjct: 459 DKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIALESELRLPLRDAFAAAQATIWFDA 518 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 R L RD+ +E + + L A E L + R Sbjct: 519 RTPL----RDLVTSEVERV-GCDLSPTGAASLSADALTHLR--ADIETQLAAVGREKGAE 571 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY-HQIGDLLHS 656 A + + + P L A L I ++++ S Sbjct: 572 APSAQAEIFMRETL-PSLLEANAADLLAFFIDRLKVYLRDRGARYDLIDAALGASAS 627 Score = 146 bits (369), Expect = 1e-32, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 14/194 (7%) Query: 523 IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE------------NDNLLTI 570 +P +L+ FF DRLK+YL DR R+DLI+A L D+LLTI Sbjct: 585 LPSLLEANAADLLAFFIDRLKVYLRDRGARYDLIDAALGASASAQVREGSAKMPDDLLTI 644 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEI--SPQYLLLEAEKRLY 628 ++ L +F + G+ L +R IL IEEKK+ + + P + + E +L Sbjct: 645 TRKVEALAKFLDTDDGKNLLAGFRRAANILKIEEKKDGAGAYDTPHHPNLRMEQPEHKLA 704 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + E ++ + + L + EP++ FFDQV VN +D ++R NRL LL + Sbjct: 705 AAVKRAREETAERLEAENFEGAMRALAKLREPVDAFFDQVTVNCEDEKLRLNRLRLLAEL 764 Query: 689 KNIILIVINVQKIV 702 + +L V + K+ Sbjct: 765 RGAMLQVADFAKVA 778 >gi|282897614|ref|ZP_06305614.1| Glycyl and Arginyl tRNA synthetase [Raphidiopsis brookii D9] gi|281197537|gb|EFA72433.1| Glycyl and Arginyl tRNA synthetase [Raphidiopsis brookii D9] Length = 716 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 191/724 (26%), Positives = 318/724 (43%), Gaps = 81/724 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + +L+ G+ + + + TP RL + + GL Sbjct: 1 MTAFLLEVGTEELPASFLSSAITQWRSRIPQMLEAHGLPIEKVAVFGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP G KA +GF + G++ + D KGD R Sbjct: 61 SQQPDQDEEIKGPPAQAAFKDGKPTKAAEGFAKKQGVELSALEVRSTD--KGDFIFVNKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R I ++L +VP + + + MRW + + RP++ ++ +L + Sbjct: 119 TLGRPITEILTELVPQWVWSLEGKRLMRWGSGDG-----RFSRPIRWLVALLDGD----- 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L+ + I++ HR + + Y+ L V++ PE R I++ Sbjct: 169 VLPLELRNGEKIVKSDRISWVHRVLHREAVSISHATEYVETLANGYVIVSPEEREKIIVD 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +R +G DLL E LVE+ +G F+ ++L LP E+ + T+Q+ F Sbjct: 229 QVNRAVEELGGCTEIYPDLLAETTNLVEYPTAVVGKFEDEFLQLPTEVSTTVMVTHQRYF 288 Query: 291 VTRTREGV--LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 L F+ +SN + I GN RV+ ARL D F++ D Sbjct: 289 PVFKNRDRRELLPNFVTISNGDP-EKSDIIALGNERVIRARLADGRFFYEAD-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-- 406 L+KPL + +L+ V F +G+ +V+RI + + I Q + Sbjct: 340 ------------LAKPLADFLPQLET--VTFQEDLGSVRAKVTRIGNIAQVICQQLGLGE 385 Query: 407 -DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 + V+RA +L KADL T++V EFPELQG +G++YA+ E+ AI EH PR Sbjct: 386 TETKRVERAALLCKADLVTQMVYEFPELQGIMGEKYALASGEDEEVAKAIFEHYLPRNAD 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +PT I V LAD+LDTLI+ + + PSGS DP+ALRRA GI+ I + I L Sbjct: 446 DILPTTLIGKIVGLADRLDTLISIFGLGLIPSGSSDPFALRRAANGIVNITWVANLPINL 505 Query: 526 SQFIEDQNL-----------------ILFFHDRLKLYLH-DRDIRHDLIEAILRPEN--- 564 +E FF R++ L ++ I +DL+ A+L ++ Sbjct: 506 EYLLEYTATSFAHTFHKDGQSLISILREFFIQRIRTLLQEEKHIDYDLVNAVLGEQDPEY 565 Query: 565 -----DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQ 617 +LL I D +L + + EK + R ++ A + +++ + I+ Sbjct: 566 IERALQDLLDIRDRAAYLQQIRHNGTLEKIYETINRSTRLAAQGDLDLQQLIPDKLINST 625 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDD 674 +E LY + Q + + Y + L I + FF D VLV + Sbjct: 626 LFQKSSETALYQALVALVPQTQLAQQTRNYQLLIAALEKIAPTVSQFFDGEDSVLVMDPN 685 Query: 675 REVR 678 +++ Sbjct: 686 PDIK 689 >gi|145590043|ref|YP_001156640.1| glycyl-tRNA synthetase subunit beta [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048449|gb|ABP35076.1| glycyl-tRNA synthetase beta chain [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 712 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 203/735 (27%), Positives = 348/735 (47%), Gaps = 67/735 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 L+E+++EE+P + + S + G LK G+ ++ + + TP RL + + + Sbjct: 11 ATLLIEVFTEELPPKSLRRLGTSFSEGIFGALKAAGLTTESSKVTSFATPRRLAVQITDV 70 Query: 60 SPHSPE-KIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLA 111 + + + E+L P G + L + G + ++K K + Sbjct: 71 LSQANDYPVREKLLPTSIAFDADGKATPPLLKKLSALGYADLDLSTLEKAGEGKNEALFL 130 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWS--TTHSPISAFSWIRPLKSILCILVAE 169 + +E +T + + K+P K M + + ++ + RP I+ + Sbjct: 131 NVIAKGAALEQTAQTALNQTLSKLPIAKMMHYQVLQKNGQLADVQFARPAHRIIAL---- 186 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAI 228 + I+++ I N T GHRF AP I + D Y LE+ A VL + RR I Sbjct: 187 -HGDTILNMSSLGIDASNQTEGHRFLAPGVITITDADQYENTLEKQANVLASFDKRRTQI 245 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + A A ++ + LL+E+ LVEW ++ FD+++L +P+E + LT++TNQK Sbjct: 246 ETQLLKAAGAD--LVLMPESLLDEVTALVEWPAIYECHFDEEFLEVPQECLILTMQTNQK 303 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + G L N F++VSNI+ + A I+ GN RVV RL DA F+++DQ Sbjct: 304 YFALTDQHGKLRNRFLVVSNIETNKPDA-IISGNERVVRPRLSDARFFFQQDQK------ 356 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + L R++ L VV+H ++G Q +R R++ + IAQ + D Sbjct: 357 --------------RSLASRVSDLGR--VVYHNQLGNQLDRTKRVQEIAIGIAQKLQVDD 400 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L RA ++K DL T++V EFPELQG +G+ YA E+ A EH PR +++ Sbjct: 401 KLASRAAEIAKTDLLTDMVGEFPELQGIMGRYYANHDGESAEVAAACSEHYMPRFAGDSL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TL+ W + P+G KDPYALRR LGI R++LE + L + Sbjct: 461 PATQTGTILAIADKLETLVGIWGVGLAPTGDKDPYALRRHALGICRLLLEKNFSLSLPEL 520 Query: 529 IE----------------DQNLILFFHDRLKLYLHDRDIR-----HDLIEAILRPENDNL 567 IE + F DRL+ YL D+ + I+A+L + Sbjct: 521 IELARSQFPQKEVQEKADAAAIYEFIIDRLRAYLRDQSVAGKPFTSAEIDAVLSQAPAQI 580 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 ++ + L EF + + + + KRI IL +K I S + L + AE L Sbjct: 581 NDLIGRLSALREFNALPQAAQLAAANKRISNIL---KKTATPIPTACSSKLLQIPAEIEL 637 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + + + + +++ ++ L ++ PI+ FF V+V ++E+RDNRL+LLQ Sbjct: 638 FQALEAITPALNAAYEQRQFVELLKALVALSAPIDQFFADVMVMDPNQELRDNRLALLQQ 697 Query: 688 IKNIILIVINVQKIV 702 + + +V ++ K+ Sbjct: 698 LHQKMNLVADLGKLA 712 >gi|300868195|ref|ZP_07112827.1| Glycyl-tRNA synthetase beta subunit [Oscillatoria sp. PCC 6506] gi|300333819|emb|CBN58011.1| Glycyl-tRNA synthetase beta subunit [Oscillatoria sp. PCC 6506] Length = 739 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 196/745 (26%), Positives = 324/745 (43%), Gaps = 97/745 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA +A ++ + E+ + + + Y TP RL + ++GL Sbjct: 1 MATFLLEVGTEELPATFVKEAIAQWQRLIPAAIAEQSLTNEAINVYGTPRRLAVVIEGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP G KA +GF + G++ S D KGD + + Sbjct: 61 TQQSDREEEIKGPPAATAFKDGKPTKAAEGFAKKQGVEIDSLEIRPTD--KGDFIFILKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R D+L ++P I K+ + MRW + RP++ ++ +L Sbjct: 119 IPGRPTADILAELIPQWISKLEGKRLMRWGDGE-----LKFPRPIRWLVALLDDAILPIT 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + + I+ GHR P P+ + ++Y+ L A + +DPE R+ I Sbjct: 174 LVNGS-ETVNSDRISQGHRVLHPQPVAISKAENYLESLRSAYIEVDPEKRQTKIREQVEA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR- 293 A G + +LLEE+ LVEW +G FD+++L LP E I I NQ+ F Sbjct: 233 AAKKQGGKADITTELLEEVTNLVEWPTAVVGKFDEEFLILPPEAITTIIVKNQRYFPILK 292 Query: 294 -TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L FI +SN + I GN RVV ARL D F+K D Sbjct: 293 SEASSELLPYFITISNGDPA-KSDVIATGNGRVVRARLADGDFFYKAD------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVA 409 L+KPL+ + +L+ V F +GT ++++R + IA + + + Sbjct: 340 --------LAKPLESYLPQLE--KVTFQENLGTVRDKINRFSKIANLIADQLQVTEEERN 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA +L KADL T++V EFPELQG +G++YA+ E AI EH PRG + +P Sbjct: 390 NIQRAALLCKADLVTQMVYEFPELQGIMGQKYALASGEAEPVATAIFEHYLPRGAGDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF- 528 + V+LADKLDTL++ +++ KP+GS DP+ALRR+ +I I ++ + L + Sbjct: 450 QSLTGQVVALADKLDTLVSIFSLGMKPTGSSDPFALRRSANAVINITWAAQLPLDLYELI 509 Query: 529 ----------------------------------------IEDQNLILFFHDRLKLYLH- 547 Q+L FF R++ L Sbjct: 510 VKVVEFTQLESLTKTGKLAPPDSQSDEYHSFMQRIRTLYVCLKQDLSDFFLQRIRTLLQE 569 Query: 548 DRDIRHDLIEAILRPEN--------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 ++ I +DL+ A+L + +LL ++ L + + +K + R ++ Sbjct: 570 EKGIDYDLVNAVLGENDPEYTERALQDLLDALERAVFLQQIRDNGTLDKIYETVNRSTRL 629 Query: 600 LAIE--EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 +K E + P+ +E+ I Q S + + Y Q+ + L I Sbjct: 630 AGQGDLDKMQLEPKTLVRPELFQKSSEQAFNDAIVQLVPKTQASKESRNYQQLVESLAEI 689 Query: 658 CEPIEIFFD---QVLVNVDDREVRD 679 + FFD VLV + E++ Sbjct: 690 APAVSNFFDGSESVLVMDSNPEIKQ 714 >gi|146319418|ref|YP_001199130.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis 05ZYH33] gi|146321622|ref|YP_001201333.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis 98HAH33] gi|253752441|ref|YP_003025582.1| glycyl-tRNA synthetase beta chain [Streptococcus suis SC84] gi|253754267|ref|YP_003027408.1| glycyl-tRNA synthetase beta chain [Streptococcus suis P1/7] gi|253756201|ref|YP_003029341.1| glycyl-tRNA synthetase beta chain [Streptococcus suis BM407] gi|229558582|sp|A4W3J4|SYGB_STRS2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229558584|sp|A4VX91|SYGB_STRSY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|145690224|gb|ABP90730.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus suis 05ZYH33] gi|145692428|gb|ABP92933.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus suis 98HAH33] gi|251816730|emb|CAZ52372.1| glycyl-tRNA synthetase beta chain [Streptococcus suis SC84] gi|251818665|emb|CAZ56500.1| glycyl-tRNA synthetase beta chain [Streptococcus suis BM407] gi|251820513|emb|CAR47268.1| glycyl-tRNA synthetase beta chain [Streptococcus suis P1/7] gi|292559046|gb|ADE32047.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus suis GZ1] gi|319758845|gb|ADV70787.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis JS14] Length = 678 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 212/719 (29%), Positives = 341/719 (47%), Gaps = 75/719 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EEIPA + A L + L + + + ++ + TP RL + ++GL+ Sbjct: 3 KNLLVELGLEEIPAYIVTPAMHQLRDRMATFLTDNRLAFDSIDVFSTPRRLAVRVRGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL T I+ KG+ Y+ V + Sbjct: 63 QQTDLTEDFKGPAKKIALDADGNFTKAAEGFVRGKGLTTAD---IEFREIKGEEYVYVTK 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +P ++ + +P SM W++ F++IRP+ ++ +L ++ Sbjct: 120 HEAGQPAKTVLAGIPEVLKAMTFPVSMNWASNK-----FAYIRPVHTLTVLL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +D+D +I G I+ GHRF ++ S D Y DL V+ DP R+N I+ Sbjct: 170 ALDMDFLDITSGRISRGHRFLGNET-EIASADSYEADLRAQFVITDPAERQNMIVEQIKA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + + D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 IEDKHNVTVEIDEDLLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V N +++GN +V+ ARLED FW+ DQ Sbjct: 289 KAGKLLPNFISVRNGN-DQYLDNVIKGNEKVLVARLEDGEFFWREDQKL----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 + + RL + V FH KIG+ E + R +V+ +K+A L + A V Sbjct: 337 ---------KIADLVERLKV--VTFHEKIGSLYEHMERTKVIAEKLADLAGLSAGEKADV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P + Sbjct: 386 ARAADIYKFDLLTGMVGEFDELQGIMGEKYALLAGEKPAVAAAIREHYLPNSAEGELPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 K+ ++LADK DTL++F+++ PSGS DPYALRRAT GI+RI+ +IPL Q I Sbjct: 446 KVGAVLALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWEIPLDQLIAE 505 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F R++ + D+ I D+ EA+L + + Sbjct: 506 LYSLNFASLTYDNQPAVMDFIRARVEKMM-DKTIPKDIREAVLASST---FVVRLQLAAS 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + F AK + + + + ++ + EK I + EK L A ++ Sbjct: 562 SAIFQKAKEADYKEAVENLSRVFNLAEKAEV---TAIDEALFENDQEKALAAAVAGLEL- 617 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D L ++ I FFD +V VDD V+ NRL+LL+ + + V Sbjct: 618 ------TEDMAGNLDKLFALSPVIAAFFDNTMVMVDDATVKANRLALLKALADKASAVA 670 >gi|56476157|ref|YP_157746.1| glycyl-tRNA synthetase beta chain [Aromatoleum aromaticum EbN1] gi|81821186|sp|Q5P766|SYGB_AZOSE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|56312200|emb|CAI06845.1| glycyl-tRNA synthetase beta chain [Aromatoleum aromaticum EbN1] Length = 696 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 204/724 (28%), Positives = 352/724 (48%), Gaps = 64/724 (8%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPH 62 L+E+ +EE+P + + E + + LK ++ ++ R + P RL + + + Sbjct: 8 LVELLTEELPPKALPRLGETFAAKVFEGLKARDLVAEDRGFRCFAAPRRLAVTVPTVRAA 67 Query: 63 SPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLR 114 +P + E++ P G A+ L++ G+ + ++ K + Sbjct: 68 APSREVTEKIMPVQVALDAEGRPTPALLKKLQAKGIAPEAVASFERRVDGKAEALFYTHL 127 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P ++DVL IV A++ +P PK MRW + ++RP+ + + + Sbjct: 128 EPGAALDDVLAAIVQEAVKALPIPKLMRWGAGDA-----QFVRPVHKLAML-----HGAR 177 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYI-RDLEEAMVLLDPECRRNAILNDAH 233 ++ + ++ G +T GHRF + I++ + + Y L E V+ D RR+ I Sbjct: 178 VVPGRVLDLDAGRVTMGHRFMSRGEIELATAEAYEPTLLAEGKVIPDFAERRSNIERQLV 237 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A G L E DLL+E+ LVE V++G F+ ++L +P+E + LT++ NQK F Sbjct: 238 ATAQEQGASLGEYADLLDEVAALVEHPTVYVGEFELEFLAVPQECLILTMRANQKYFPLF 297 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L N F++VSN++ +D + IV GN RVV RL DA F+++D+ + Sbjct: 298 DAAGKLLNRFLIVSNMRLADP-SNIVAGNQRVVRPRLSDARFFFEQDRKH---------- 346 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDR 413 LD R+ RL VV+H K+G+Q ERV R+ L +IA + DVA R Sbjct: 347 ----------TLDSRLPRL--APVVYHNKLGSQLERVERLERLAGRIADRLHGDVAAASR 394 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+KADL T++V EFPELQG +G+ YA+ E DA++ H +PR + +P Sbjct: 395 AARLAKADLVTDMVGEFPELQGIMGRYYALNDGEGEVVADAVQSHYQPRFAGDTLPAGNT 454 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 + V+LADKLDTL+ F+ I + P+G KDP+ LRRA LG++RI++E + + L+ + D Sbjct: 455 ACAVALADKLDTLVGFFGIGQLPTGDKDPFGLRRAALGVLRILIETPLPLDLAALVGDAA 514 Query: 534 L----------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + F +RL+ L + D+++A+L + + + + Sbjct: 515 EGFAPGLLTAADFESQLLDFMFERLRNLLREAGHAVDVVDAVLALHPTRIDLVPAKLDAV 574 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KRI IL E + E L +AEK L+ + + Sbjct: 575 RVFRGLPEAEALAAANKRIVNILKKAE----DELPEPDVALLQEQAEKALFHAVVEVAPL 630 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + + ++ Y L + ++ FFD V+V V++ R NRL+LL+ + ++ V + Sbjct: 631 VHSHVANEDYTDALCALAGLRAAVDTFFDDVMVMVEEPLTRRNRLALLRQLAGLMNQVAD 690 Query: 698 VQKI 701 + ++ Sbjct: 691 LSRL 694 >gi|303327126|ref|ZP_07357568.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. 3_1_syn3] gi|302863114|gb|EFL86046.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio sp. 3_1_syn3] Length = 698 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 202/732 (27%), Positives = 323/732 (44%), Gaps = 67/732 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI SEE+P+R +L L E G+ Y +R TP R + ++ L+ Sbjct: 1 MATFVLEIGSEELPSRFLAPEEAELRARFSTALDEAGLEYGAVRVMSTPRRAVVLVEDLN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P EK E GP GA KA++GF R+ GL +++ + KG+ Sbjct: 61 PVQREKEEVIPGPPARVAYGPDGAPTKALEGFARTHGLSVADVFRLETE--KGEYVAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R + +L I P I +P+ K MRW A ++ RP+ IL +L E Sbjct: 119 RTGGAAAKALLAGICPAVITSLPFAKRMRWGAY-----ALAYARPIHWILALL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILNDA 232 +++ DL + G T GHR H P V D Y+ ++ V LDP RR I+ Sbjct: 169 EVVPFDLGPVASGRETRGHRVHGSGPFSVAHADAYLEVAADSCAVTLDPARRRAVIVEGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+ G ++ + LL+E+ GL E + FD YL +P E++ +++++QK F Sbjct: 229 DAQAARAGGRVLWNDGLLDEVQGLAEHPVPLLADFDPAYLEVPREVLLTSMESHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ D + G RV+ ARL+DA FW+ D Sbjct: 289 EGPDGKLMPHFLTVLNLSPEDM-EVVKHGWERVLRARLDDARFFWRAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----IDADV 408 L + D + +LD V+F +G+ G++ R+ L + +A+ + AD+ Sbjct: 336 --------LRENFDLWLEKLD--HVIFIGALGSMGDKTRRLEALCRWLAERCAPRLGADL 385 Query: 409 -ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A RA LSKADL T +V EF LQG +G YAV + E + DA++E P GP Sbjct: 386 TAEAARAGRLSKADLVTGLVGEFDTLQGIMGGIYAVQKGEAQAVADALKEQYLPAGPDSP 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + + +S+ADK DTL+ + +N P+G+ DP LRR LGIIRI+L+ +D+ + + Sbjct: 446 LPQSPVGALLSMADKADTLVGCFGLNMIPTGAADPNGLRRCALGIIRILLDFGLDLDVRE 505 Query: 528 FIEDQNLIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + FF RL+ Y R L++A L + Sbjct: 506 LFAKARELYGTRQWKLPPDEALDKLMEFFAARLRNYFLSRGQDTLLVDAALNAGAAQVPD 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + L F + + + KR+ I+ + + L EK L Sbjct: 566 SGARLAALAAFSREPGYAEAVQTFKRVANIVRKQAAAET-LPEYWDAALLREAPEKDLAE 624 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + + L + ++ FFD V+V +D +R NRL++LQ + Sbjct: 625 TLETLLPRLDAFRASGDHDAALATLREVRPAVDAFFDGVMVMCEDAALRRNRLAMLQALG 684 Query: 690 NIILIVINVQKI 701 + + + + Sbjct: 685 SRFARLADFAAL 696 >gi|299067915|emb|CBJ39129.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum CMR15] Length = 697 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 208/719 (28%), Positives = 352/719 (48%), Gaps = 66/719 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAASITGVRRTAPDRELREK 73 Query: 71 LGP----------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P K + +S G+ TI+ +++ P K + + Sbjct: 74 VLPVNIAFDAEGKPAAPLTKKLAALAKSIGVDTIAPESLERAPDGKAESLFHRYTARGAV 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + + ++RP ++ +L +++I Sbjct: 134 LADGLQAALSQTIAGLPIPKVMIYQRPNG--DSVQFVRPAHRLIALL-----DDEVIPAG 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ + V+ R+ AI + + A A Sbjct: 187 VLGLQSGNVTLGHRFLSAGEIVIPHATAYASTLKSQGKVIAGYAERKEAIRAELLKAAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ F++++L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVVYPCHFEEQFLAVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN+ A++ AI++GN RVV RL DA F++ D+ Sbjct: 305 LRNRFLIVSNL-ATETPRAIIEGNERVVRPRLADARFFFEHDKK---------------- 347 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ +L VV+H KIGTQ ERVSR++ + ++A+ + ADVA RA +L+ Sbjct: 348 ----KPLADRVPQLSR--VVYHNKIGTQLERVSRLQAIAGQLAEKLGADVAHASRAALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEAEDVALACSEHYQPRFAGDALPGTTTGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL---- 534 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ +E Sbjct: 462 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEAAATSFEG 521 Query: 535 -----------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPDLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696 >gi|322386853|ref|ZP_08060477.1| glycyl-tRNA synthetase beta subunit [Streptococcus cristatus ATCC 51100] gi|321269135|gb|EFX52071.1| glycyl-tRNA synthetase beta subunit [Streptococcus cristatus ATCC 51100] Length = 679 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 343/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DL+ +I G + GHRF ++ S D Y DL V+ P R I+ Sbjct: 169 QAFDLEFLDIKSGRTSRGHRFLGRET-EIASADSYEDDLWAQFVITSPLEREKMIIEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEQEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L + FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLSHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 + + +L +V FH KIG+ E + R + +AQ D A Sbjct: 338 -----------IADLVEKLS--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADETAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++ I+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVHILDKFGWNIDLAQLLG 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR I D++ A+L+ N + +V+ Sbjct: 505 RLYELKFDSLSYENQEAVLDFFRARVEKMM-DRSIPKDIVTAVLQSTNFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++ + EK L A I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNSALFENQEEKDLAAAIEKV-- 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 617 ELTPDLAAN-----LDQLFALSPAIDAFFDHTMVMAEDEAVRNNRLALLSSLTAKAGQLA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|325925467|ref|ZP_08186861.1| glycyl-tRNA synthetase beta chain [Xanthomonas perforans 91-118] gi|325544145|gb|EGD15534.1| glycyl-tRNA synthetase beta chain [Xanthomonas perforans 91-118] Length = 746 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 197/782 (25%), Positives = 334/782 (42%), Gaps = 119/782 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ GV + + TP RL + Sbjct: 1 MSEHLPLLIELGTEELPVKALPGLAQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + + Sbjct: 119 FVHRAVTPGARTADLLSEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGS 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGAVSLAAPGDYVDALRAAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAARQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+G+ ++V+R+ L + IA + AD Sbjct: 348 G----------------------EGLSSVTYQAKLGSVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 AQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKKL 505 Query: 529 -------------------------------------------------IEDQNLILFFH 539 +D + F Sbjct: 506 LVEARNQINVQASARQTLKTEAALSKAKDAGAALPKSVEKEAHTALAQSGQDAEIFDFIL 565 Query: 540 DRLKLYLHDRDIRHDLIEAILR--------------------PENDNLLTIVDLIKHLNE 579 DRL+ Y D+ + A+ + +L I + Sbjct: 566 DRLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTSVGAHPGATHASLYDFDRRIDAIGI 625 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KRI IL E EI +I L AE+ L + Sbjct: 626 FATLPEADALAAANKRIRNILRKAE---GEIPGDIDTSLLREPAEQALAEAVEAAIGDTG 682 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V ++ Sbjct: 683 DALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKLGDRLGSVAAIE 742 Query: 700 KI 701 + Sbjct: 743 HL 744 >gi|39934122|ref|NP_946398.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris CGA009] gi|39647970|emb|CAE26490.1| putative glycyl-tRNA synthetase, beta chain [Rhodopseudomonas palustris CGA009] Length = 776 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 260/578 (44%), Positives = 351/578 (60%), Gaps = 27/578 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQGKAADDLKRLVTDKLVAEGLVYEGAKAFATPRRLTLTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP + Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYVALIEKPGKPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ +PV ++ PWPKSMRW + A W+RPL SI+ E + ++ ++ Sbjct: 121 IDVIAQFLPVIVRTFPWPKSMRWGARSARPGALQWVRPLHSIIATFGMETEEPDVVHFNV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G T GHRF AP V+ + Y L A V+LD R++ IL DA LA A Sbjct: 181 DGIEAGQTTRGHRFMAPDEFSVRRFEDYEAKLFAAKVVLDSARRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED+ LL+E+ GLVEW MGSFDK +L +P+E+IR TI+ NQKCFV G L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDKDFLSIPDEVIRATIRANQKCFVVADPATGKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL +NI+ASDGGAAI GN RV+ ARL DA F+ D Sbjct: 301 ANKFILTANIEASDGGAAITAGNERVIRARLSDAKFFYDTD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPKFD--QIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKTKRAAKLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ Q E+ S A EEH KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAQGEDASVAAACEEHYKPQGPADRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL---IL 536 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IR++LE + I L I++ + Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRLLLETGVGISLRVLIQEAYFSVLLA 518 Query: 537 FFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDL 573 F + ++L + R + D +D Sbjct: 519 FQYGSYYVFLRQLEGFSFATVTCHFRDKEDRFYARLDR 556 Score = 170 bits (432), Expect = 6e-40, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 4/174 (2%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +L+ FF DRLK+ L D+ RHDL++A+ D++L IV ++ L F ++ G+ L Sbjct: 601 ADLLSFFADRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLL 660 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 KR ILAIEEKK+ + L+ EK L+ I + + ++ + Sbjct: 661 AGTKRAANILAIEEKKDGRTFAGSPDEALMTNIEKHLWRTIQSTVVEANDHVRNEDFESA 720 Query: 651 GDLLHSICEPIEIFFDQ---VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ ++ FF + + VN DD+ VR+NRL LL I+ V + KI Sbjct: 721 METLSTLRSAVDSFFAKESGIKVNADDKAVRENRLKLLNEIRAATRAVADFSKI 774 >gi|188585834|ref|YP_001917379.1| glycyl-tRNA synthetase, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|229558564|sp|B2A1Y6|SYGB_NATTJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|179350521|gb|ACB84791.1| glycyl-tRNA synthetase, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 693 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 194/730 (26%), Positives = 337/730 (46%), Gaps = 72/730 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L E+ +EE+PAR + L LL E + Y+N++ TP RL L + GL Sbjct: 1 MHNTLLFELGTEELPARFIPGLIKQLEENSANLLTEYRIEYENIKVMATPRRLTLLVNGL 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + GP G KA GF R + D +I++D K VY AV Sbjct: 61 ADKQQSSTTMKRGPAKEIAFDENGEPTKAAIGFARGQNIDP-KDLEIREDNGKEYVY-AV 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +DVL ++ I K P M W+ ++RP++ ++C+ Sbjct: 119 AEIVGENCQDVLPKLLDELITKFNLPVKMFWNNKQD-----KFLRPVRWLVCLF-----N 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ L+ + NI+ GHRF + + + S ++Y + ++ V++D R I Sbjct: 169 DQVLPLNFGTVEASNISRGHRFLSQGDVIINSAENYEEVMRDSWVMVDHNVREETIKAQI 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA + DLLEE+ LVEW +G+F +++L +P+E + +++ +QK F Sbjct: 229 EELADQMNASPEMPHDLLEEVNFLVEWPTALLGNFAEEFLEIPKEALITSMQEHQKYFAL 288 Query: 293 RTRE--GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 +E L F+ V N G + GN RV+ ARL DA F++ D Sbjct: 289 VDKEDSSKLLPYFVAVRNGD-DHGIDKVKAGNERVLRARLSDARFFFEEDTK-------- 339 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-- 408 L+ + +L +++ ++G+ ++V+R+ LGK + +++ Sbjct: 340 ------------TSLESKREQLK--SIIYKEQLGSVDQKVTRMEELGKTLLDILELSEPV 385 Query: 409 -ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 +L RAI LSKADL T +V EFP LQG +G++YA + E+ C I EH PR + Sbjct: 386 RSLTLRAIALSKADLPTNMVSEFPHLQGIMGEKYARIHGEDEKVCLGISEHYLPRHTGDK 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P + S+ DK+D + + +AI E+PSGS+DPYALRR LGI+ IILE ++ L Q Sbjct: 446 LPQTMVGTITSIVDKVDNIASSFAIGERPSGSQDPYALRRQALGIVHIILETELAFSLEQ 505 Query: 528 FIEDQ------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 +++ F R + +++ + D+I++ L + N+ Sbjct: 506 LFHRALSLIPESALVAPISNILDDILDFVKLRSRTIFNEQGLPIDIIDSTLEVDKANVYK 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 K L ++ S + E + R+ + + ++ + + L E EK LY Sbjct: 566 AYLRAKVLKDYRDSQELEDVRTAYTRVKNLANKAKGED------VYTELLQDETEKMLYH 619 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + ++ L + I+ FFD+V+V VDD+ +++NRL+L+ +IK Sbjct: 620 KYLNTEDKLLSDLEQDEISSAISELAGFKDYIDQFFDEVMVMVDDKHLQNNRLNLIYHIK 679 Query: 690 NIILIVINVQ 699 + + + Sbjct: 680 EMYRQLADFS 689 >gi|223934266|ref|ZP_03626194.1| glycyl-tRNA synthetase, beta subunit [Streptococcus suis 89/1591] gi|302024384|ref|ZP_07249595.1| glycyl-tRNA synthetase subunit beta [Streptococcus suis 05HAS68] gi|330833382|ref|YP_004402207.1| glycyl-tRNA synthetase beta chain [Streptococcus suis ST3] gi|223897065|gb|EEF63498.1| glycyl-tRNA synthetase, beta subunit [Streptococcus suis 89/1591] gi|329307605|gb|AEB82021.1| glycyl-tRNA synthetase beta chain [Streptococcus suis ST3] Length = 678 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 211/719 (29%), Positives = 341/719 (47%), Gaps = 75/719 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EEIPA + + L + L + + + ++ + TP RL + ++GL+ Sbjct: 3 KNLLVELGLEEIPAYIVTPSMHQLRDRMATFLTDNRLAFDSIDVFSTPRRLAVRVRGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL T I+ KG+ Y+ V + Sbjct: 63 QQTDLTEDFKGPAKKIALDADGNFTKAAEGFVRGKGLTTAD---IEFREIKGEEYVYVTK 119 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +P ++ + +P SM W++ F++IRP+ ++ +L ++ Sbjct: 120 HEAGQPAKAVLAGIPEVLKAMTFPVSMNWASNK-----FAYIRPVHTLTVLL-----DDE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +D+D +I G I+ GHRF ++ S D Y DL V+ DP R+N I+ Sbjct: 170 ALDMDFLDITSGRISRGHRFLGNET-EIASADSYEADLRAQFVITDPAERQNMIVEQIKA 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + + D+DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R Sbjct: 229 IEDKHNVTVEIDEDLLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRD 288 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + G L FI V N +++GN +V+ ARLED FW+ DQ Sbjct: 289 KAGKLLPNFISVRNGN-DQYLDNVIKGNEKVLVARLEDGEFFWREDQKL----------- 336 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALV 411 + + RL + V FH KIG+ E + R +V+ +K+A L + A V Sbjct: 337 ---------KIADLVERLKV--VTFHEKIGSLYEHMERTKVIAEKLADLAGLSAGEKADV 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA + K DL T +V EF ELQG +G++YA+L E + AI EH P +P + Sbjct: 386 ARAADIYKFDLLTGMVGEFDELQGIMGEKYALLAGEKPAVAAAIREHYLPNSAEGELPES 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 K+ ++LADK DTL++F+++ PSGS DPYALRRAT GI+RI+ +IPL Q I Sbjct: 446 KVGAVLALADKFDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWEIPLDQLIAE 505 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ F R++ + D+ I D+ EA+L + + Sbjct: 506 LYSLNFASLTYDNQPAVMDFIRARVEKMM-DKTIPKDIREAVLASST---FVVRLQLAAS 561 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 + F AK + + + + ++ + EK I + EK L A ++ Sbjct: 562 SAIFQKAKEADYKEAVENLSRVFNLAEKAEV---TAIDEALFENDQEKALAAAVAGLEL- 617 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D L ++ I FFD +V VDD V+ NRL+LL+ + + V Sbjct: 618 ------TEDMAGNLDKLFALSPVIAAFFDNTMVMVDDAAVKANRLTLLKALADKASAVA 670 >gi|125624283|ref|YP_001032766.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|229470699|sp|A2RL88|SYGB_LACLM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|124493091|emb|CAL98055.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|300071065|gb|ADJ60465.1| glycyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. cremoris NZ9000] Length = 673 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 213/717 (29%), Positives = 343/717 (47%), Gaps = 63/717 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + L E + + + ++ TP RL L ++ LS Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMEAFLNENRLKFDKIIKFSTPRRLALIVEELS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G KGD Y A Sbjct: 61 DSSEAIDEEVKGPSAKIAKDAEGNWSKAIQGFSRGQGATPDDLIL------KGDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HVDGVKSEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I+ DL ++ + GHRF A I++++ + Y + E VL+D E R+ I Sbjct: 165 EIVAFDLLDVTANRFSRGHRFLANVEIELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENNWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNA-EHIENVVLGNEKVLFARLEDAEFFWKEDQKL---------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK---IAQLIDADVAL 410 ++ +A+L V FHAKIG+ E ++R +++ K IA L D + Sbjct: 334 ----------KIEDLVAKL--AKVTFHAKIGSITEHMARTKLIAAKLADIAGLTDEEKVD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVAAAIREHYMPTSADGQLPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---- 526 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 527 --QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + ++ F R++ L ++ R+D++EA + N ++ +++ ++ Sbjct: 502 QFEGQNHAEILEFVKARVQKLLLEKLDRYDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + + R ++ EI+P + E+ LY + Sbjct: 562 PFKPAIENVSRSINLVKKAADI-----AEINPALFEEDTEQALYDAVISLQNQWTYKPCE 616 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +++ I +L IE FFD V+V +D VRDNR++LL + + ++ + I Sbjct: 617 EKFRAIVHMLA---PAIEAFFDNVMVMAEDLAVRDNRIALLSEVVALTSVMADFSLI 670 >gi|323340797|ref|ZP_08081049.1| glycyl-tRNA synthetase beta subunit [Lactobacillus ruminis ATCC 25644] gi|323091920|gb|EFZ34540.1| glycyl-tRNA synthetase beta subunit [Lactobacillus ruminis ATCC 25644] Length = 692 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 196/734 (26%), Positives = 340/734 (46%), Gaps = 78/734 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M ++LLEI EEIPA + + L + LKE + + + Y TP RL L + GL Sbjct: 1 MSQNYLLEIGLEEIPAHVVTPSINQLVERMTSFLKENRLSFDKIEAYSTPRRLALKVIGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP G KA GF R G+ ++ KG Y+ V Sbjct: 61 ADKQEDIEELAKGPAKKIAYDKDGNWSKAAQGFARGQGVSVD---ELFFQELKGVEYVYV 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + T V + ++ +P MRW + F ++RP++ I+ +L Sbjct: 118 KKFIAGKSAKEVLTSVKEVVMEMKFPTMMRWGSND-----FEYVRPIRWIVSLL-----N 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ + ++ G + GHRF ++V++ D Y L++ MV+ D R+ I++ Sbjct: 168 DEIVSFKVLDLETGRKSQGHRFLGKE-VEVRNADAYPECLKQEMVIADARERKEIIMSQI 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA +V D DLLEE+ LVE+ VF GSFD+KYL +P+ ++ ++K NQ+ F Sbjct: 227 DELAKKNSWNIVVDPDLLEEVNNLVEYPTVFAGSFDEKYLSVPDAVLITSMKDNQRYFYV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N + +V GN +V+ ARLEDA F++ DQ Sbjct: 287 EDSDGKLLPHFVSVRNGNDA-YLENVVSGNEKVLTARLEDAKFFYEEDQK---------- 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VA 409 + + + RL V+FH KIGT E++ R+ ++ + + + +A Sbjct: 336 ----------QTISDYVERLK--KVMFHDKIGTIYEKMERVALIAAYLGKHLGLSQTQLA 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA ++ K DL T +V EF ELQG +G+ YA L E + A+ E P ++P Sbjct: 384 DLKRAAMIYKFDLVTGMVGEFSELQGVMGEIYASLFGETDAVASAMREEYMPTSSEGDLP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +S+ADK D++ F++ PSGS DPYALRR LGI+RI L+ ++ + Sbjct: 444 ESTIGAVLSIADKADSIQAFFSAGMIPSGSNDPYALRRQALGIVRIALDKGWNLSVPLLH 503 Query: 530 E---------------------DQNLILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNL 567 E + F DR+ + + D+ D + A L +++ Sbjct: 504 EAIMSAFKERGDLYANIDPEKNYAGVKDFMFDRVAQIIGSNNDVGRDALAAALANKDNEF 563 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 +++++ + L + S ++ + + R+ ++ + + + + +AEK+ Sbjct: 564 VSVLEAAETLTKHASDDDFKETIEALTRVSRLAKKADFE----AASVDESLFENDAEKKF 619 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + ++ Q+ K Y LH + I +FD +V DD +V+ NRLS L Sbjct: 620 HDAC----SNAQKGYCCKSYEDKYQALHGLKGAISEYFDATMVMADDEKVKHNRLSQLVL 675 Query: 688 IKNIILIVINVQKI 701 + N+ +++++ Sbjct: 676 LSNLTTAFGSLEEL 689 >gi|73540213|ref|YP_294733.1| glycyl-tRNA synthetase subunit beta [Ralstonia eutropha JMP134] gi|72117626|gb|AAZ59889.1| Glycyl-tRNA synthetase, beta subunit [Ralstonia eutropha JMP134] Length = 710 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 201/738 (27%), Positives = 353/738 (47%), Gaps = 69/738 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLK 57 M D L+E+++EE+P + + + + L L+E ++ + + + +P RL + Sbjct: 5 MTDSLLIELFTEELPPKALARLGDAFAQGLFAGLRERDLLEADAAVTPFASPRRLAALVS 64 Query: 58 GLSPHSPEKIE-ERLGPRVGAGKKAIDGFL----------RSTGLQTISDCQIKK-DPKK 105 G+ +P++ + E++ P A + +S G+ I +++ K Sbjct: 65 GVRRSAPDREQREKVLPLTVALGANGEPTAPLAKKLAALAKSVGVAEIDWQTLERASDGK 124 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCI 165 + + + L+ + I K+P PK M + ++RP ++ + Sbjct: 125 AEAFFYRYTAKGAELAAGLQAALDDTIGKLPIPKVMSYQRPGGE--TVHFVRPAHRLIAL 182 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECR 224 +E I+ + L +P N+T GHRF + I++ Y L E+ V+ + R Sbjct: 183 FGSE-----IVPVTLLGLPASNLTQGHRFLSHGTIEIAHATQYADTLLEQGKVIANYAQR 237 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R +I + A A ++V + LL+E+ LVEW V+ F++ +L +P+E + LT++ Sbjct: 238 RESIREQLLKAAGAD--QVVMPEALLDEVNSLVEWPVVYACHFEEAFLAVPQECLILTMQ 295 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 TNQK F EG L N F++VSN+ A++ +I+ GN RVV RL DA F+ +D+ Sbjct: 296 TNQKYFALTDAEGHLRNRFLIVSNL-ATETPQSIITGNERVVRPRLADAKFFFDQDRK-- 352 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K L R+ +L VV+H KIGTQ +RV R++ + IA + Sbjct: 353 ------------------KTLASRVPQL--ASVVYHNKIGTQLDRVQRLQQIAGHIADAM 392 Query: 405 DA-----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 +A D A R L+KADL T++V EFPELQG +G YA +E+ A EH Sbjct: 393 NASGFAVDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDESEDVALACSEHY 452 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PR + +P +S V+LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E Sbjct: 453 RPRFAGDVLPEGAVSTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEK 512 Query: 520 KIDIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + + + + F +DR++ YL D+ + +EA++ Sbjct: 513 PLALSVDTLLALTQQAFAGVPAVKPAPDAIADFLYDRVRGYLKDKGYTTNEVEAVVSLRP 572 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L I+ ++ + F + + E + KRI IL + ++I+ ++P +AE Sbjct: 573 QQLHDILGRLEAVRTFAALPEAEALAAANKRITNILKKNAEAAQDIA-AVNPALFQEDAE 631 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + L+ I + + + L + E ++ FFD V+V +D ++R NRL+L Sbjct: 632 RALHGAIERVRPDAEAAFARGDFTSALRDLAQLREAVDGFFDNVMVMAEDAQLRANRLAL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L + + V ++ K+ Sbjct: 692 LASLHALANRVADISKLA 709 >gi|310778466|ref|YP_003966799.1| glycyl-tRNA synthetase beta chain [Ilyobacter polytropus DSM 2926] gi|309747789|gb|ADO82451.1| glycyl-tRNA synthetase beta chain [Ilyobacter polytropus DSM 2926] Length = 690 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 191/722 (26%), Positives = 338/722 (46%), Gaps = 73/722 (10%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EEIPAR A D+ + + + + ++ ++ + TP RL L + G+S Sbjct: 4 LLEIGMEEIPARFLKPALNDIEKYIKKEFESQRIKFETLKTFGTPRRLVLLVDGVSEKQE 63 Query: 65 EKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + GP G +A GF +S G+ ++ KG+ Sbjct: 64 DLDIVNTGPAKEVAYDVNGELTRAGVGFAKSQGIDPTDLEILET--PKGEYIAVRKFVEG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +++L ++ I + +PKSM+WS + + RP++ L + A +++++ Sbjct: 122 KDTKELLSGLLKNLITGLTFPKSMKWSDL-----SMKFARPVQWFLAM-----ADDELVE 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I + GHRF +V S++ Y L E V++D E R+ I++ + Sbjct: 172 FEIEGIKSSLNSKGHRFFGEE-FEVTSIEEYFTKLRENNVIVDIEERKQMIIDMIKEKCT 230 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G +++ + DLL+E+ L+E+ +G+F+ ++L +P+E++ ++++ +Q+ F +G Sbjct: 231 KTGEQVLIEPDLLDEVTNLIEYPYPIVGTFNSEFLEVPQEVLIISMQVHQRYFPILDSQG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L F+++ N S + +GN +V++ARL DA F++ DQ Sbjct: 291 KLLPKFVVIRNGITS--SEHVRKGNEKVLSARLSDARFFYQEDQK--------------- 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVDRAI 415 K L++ + +L VVF +GT +++SR + L + +++ + + R I Sbjct: 334 -----KSLEEFVDKLST--VVFQKDLGTIAQKISRSKKLAEYMSEKLALRDSKEDIMRTI 386 Query: 416 VLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ E F +LQG +G +YA+ E IEEH PR + +P Sbjct: 387 HLAKADLVSNMIGEKEFTKLQGFMGADYALKAGEKEVVSKGIEEHYYPRYQGDKLPQGIE 446 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 + + D++DTL+ + I PSGSKDP+ALRRA L I+ IIL +K+ I L + Sbjct: 447 GVIAGICDRMDTLVGCFGIGMIPSGSKDPFALRRAALAIVNIILNSKLVISLEELTSKML 506 Query: 534 LIL-------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 IL FF R D R D+I A+L + D LL + I Sbjct: 507 DILEEDNVLKRPKKDVLKDLMEFFKQRAINVFADHGHRKDVIGAVLSIDCDVLLEASEKI 566 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L + +L KR+ I +K IS L+ +AEK L+ D Sbjct: 567 ETLEKVSKEEGFNDLVLLLKRVGNISKDHHEK------AISTDLLVEDAEKELHKFYVDL 620 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++ K Y + + + I FFD V+V D+ +++NRLSLL+ + I Sbjct: 621 DSKTELNLQTKSYEEFFRNILAGKNVINRFFDSVMVMDKDQSLKNNRLSLLKSLNEIFNR 680 Query: 695 VI 696 V Sbjct: 681 VA 682 >gi|241895548|ref|ZP_04782844.1| glycine--tRNA ligase [Weissella paramesenteroides ATCC 33313] gi|241871126|gb|EER74877.1| glycine--tRNA ligase [Weissella paramesenteroides ATCC 33313] Length = 700 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 199/734 (27%), Positives = 333/734 (45%), Gaps = 84/734 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI EE+PA + A L +KE + Y +++ + TP RL + + ++ Sbjct: 7 MANFLLEIGLEEMPAHLVTPAINQLVERAATFMKENRLQYGDIKPFSTPRRLAILISEVA 66 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + +E GP A KA GF R G+ T I KG+ Y+ V Sbjct: 67 DKADDLTQEVKGPAKKAAFDKEGNYSKAAQGFARGQGVTTDD---ITFKEFKGNEYIYVT 123 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + + I + + +M+W+ F ++RP++ I+ +L + Sbjct: 124 KFEAGKPAIEVLSGFKEVIMSMTFTTTMKWARH-----TFEYVRPIRWIVALL-----DD 173 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ ++ ++ G T GHRF I + Y+ DLE+ V D R+ I++ Sbjct: 174 MVVPFNVVDVDSGRETRGHRFLG-QSINIAQASDYVNDLEKVYVQADASVRKANIVSQID 232 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +LA+ + +D DLLEE+ +VE+ F+G FD +YL LPEE++ +++ +Q+ F Sbjct: 233 KLAAENNWHVEKDADLLEEVNNIVEYPTAFVGRFDSEYLDLPEEVLITSMREHQRFFHVI 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L F+ V N + + ++ GN +V+ ARLEDA F+ DQ N + + K Sbjct: 293 DDSGALLPYFVSVRNGNS-EHLDNVIAGNEKVLIARLEDAKFFYHEDQKNDIDFYNDK-- 349 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL--- 410 + V FHAK+G+ R + L I Q I Sbjct: 350 --------------------LQVVSFHAKLGSVANHTKRAQALAAIIGQQISLTSDQQMQ 389 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L E+ + AI EH P +P Sbjct: 390 LARAAEIYKFDLMTGMVGEFDELQGIMGEKYALLFGEDPAVAQAIREHYMPISADGALPE 449 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----LS 526 + + ++LADKLD+L++F+A PSGS DPYALRRA G++ I+ N +P LS Sbjct: 450 SVLGKVLALADKLDSLLSFFAGGMMPSGSNDPYALRRAASGVVNILHANDWHLPIDIILS 509 Query: 527 QFIED----------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + +++ ++I F DR+ + IR+D+I A+ + Sbjct: 510 ELVDEVLADDGHFGLPEEAANNLKSVINDVITFLTDRVVKAMQTEKIRYDVINAVTTGKL 569 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + + L + + + S R+ ++ + ++P +AE Sbjct: 570 TDTTQMFTSANALLAHSNDQTFREGVESLTRVMRLTSKN-----PTEATVNPALFENDAE 624 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K+LY S+ + ES+ + L + I +FDQ +V V+D V+ NRL+ Sbjct: 625 KQLY---SETSLLVNESLTTDD---LVSSLLGLQPAIAAYFDQTMVMVEDEAVKQNRLAT 678 Query: 685 LQYIKNIILIVINV 698 LQ + N V N Sbjct: 679 LQIVSNEAEKVANF 692 >gi|332529556|ref|ZP_08405513.1| glycyl-tRNA synthetase subunit beta [Hylemonella gracilis ATCC 19624] gi|332040994|gb|EGI77363.1| glycyl-tRNA synthetase subunit beta [Hylemonella gracilis ATCC 19624] Length = 734 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 207/761 (27%), Positives = 340/761 (44%), Gaps = 93/761 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K E + +L L+ +G+ + + Y +P RL ++ + Sbjct: 5 NLLVELFVEELPPKALKKLGEAFASVLAEQLRAQGLASADSVVTPYASPRRLAAHVTAVV 64 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQI-----KKDPKKGDV 108 + +K ++++L P G A+ L++ G + + K + Sbjct: 65 GKAADKAVQQKLMPVSVGLDAAGQATPALLKKLQALGADVSDTAKAVAGLKRAPDGKAEA 124 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSILC 164 P ++ L+ + AI K+P PK M + S+ +++RP ++ Sbjct: 125 LFYDSVVPGATLDAGLQKALDEAIAKLPIPKVMSYQLETDCELPGWSSVNFVRPAHGLVA 184 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKV-QSLDHYIRDLEE-AMVLLDPE 222 + ++ + + GN T GHRF A + V + D Y L + V+ Sbjct: 185 L-----HGSSVVPVQALGLKAGNSTRGHRFEAKKDVVVLKDADGYAAALRDDGAVIASFA 239 Query: 223 CRRNAILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 RR I+ AS VG +ED+ LL+E+ LVE V + F+K++L +P+E + Sbjct: 240 ERRAEIVRQLAAAASKVGGGARPIEDEALLDEVTALVERPNVLVCEFEKEFLAVPQECLI 299 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 LT+K NQK F G L N F++VSNI +D +A++ GN RVV RL DA F+ +D Sbjct: 300 LTMKANQKYFPLLDASGRLTNKFLVVSNISPADA-SAVIGGNERVVRPRLADAKFFFDQD 358 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + K L+ R+ L VV+H K+GTQGERV R+R + K I Sbjct: 359 RK--------------------KTLESRVEGLG--KVVYHNKLGTQGERVERVRAIAKAI 396 Query: 401 AQLIDADVALVDRAIVLS---KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 AQ + D LV A + K DL T++V EFPELQG +G YA AIE+ Sbjct: 397 AQQLG-DAKLVAAADTAARLAKTDLLTDMVGEFPELQGIMGGYYARHDGLGEEIAHAIED 455 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H KPR + +P N + + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR++ Sbjct: 456 HYKPRFAGDELPRNTVGLVVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRMLG 515 Query: 518 ENKIDIPLSQFIEDQNLI------------------------------------LFFHDR 541 E + + L + I + F +DR Sbjct: 516 EKNLALDLDKLISSARQVIDQFLLLKVVQAGLPALDKSSNPQNNERPDVAAALSDFIYDR 575 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 L L ++ ++A+L L + + + F + + + KRI IL Sbjct: 576 LAGSLREQGYSAQEVDAVLALRPQRLGEVPKRLTAVRAFAALPEAAALAAANKRIGNIL- 634 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 +K + ++ L AEK L+ + + Y L + P+ Sbjct: 635 --KKAEGVVEAKVDAALLKESAEKALHGALHSVQPLADSLYANGEYAASLRELAVLKAPV 692 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + FFD V+VN +D +R NRL LL+ + + V ++ ++ Sbjct: 693 DAFFDGVMVNAEDPALRANRLGLLKSLHEAMNRVADLSRLA 733 >gi|307728479|ref|YP_003905703.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. CCGE1003] gi|307583014|gb|ADN56412.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1003] Length = 700 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 207/716 (28%), Positives = 344/716 (48%), Gaps = 62/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + Y TP RL + +K + +PE+ + E+ Sbjct: 19 PPKALARLGDAFAEGIAERLAARDLIEGELSFERYATPRRLAVTVKNVRAVAPERHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P + G + L + G ++SD + +D K + + P + + Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFSVSDLERAQD-GKAEAFFLRYAAPGATLAE 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L+ + + K+P PK M + S ++RP + + E+++ + Sbjct: 138 GLQAALDETLTKLPIPKVMTYQRPDG--SNVQFVRPAHRLTAL-----HGERVVPVSALG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 I + T GHRF + +++Q D Y+ L + V+ + R+ I H LA A G Sbjct: 191 IDADDTTLGHRFLSEGFVQIQHADAYVDTLMHKGRVVPNFADRKETIRT--HLLAHADGD 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++V + LL+E+ LVEW + F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 QVVMPESLLDEVTSLVEWPVAYSCRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ + G I++GN RVV RL DA F+++D+ Sbjct: 309 RFLIVSNIETATPGD-IIEGNERVVRPRLADAKFFFEQDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 KPL +R+ L +VV+H K+G+ +RV R+ L IA LI ADVAL RA L+KAD Sbjct: 349 -KPLAERVPLL--ANVVYHNKLGSALQRVERLEGLAGAIAALIGADVALAKRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +P V+LAD Sbjct: 406 LITDMVGEFPELQGTMGTYYARHDGEPEEVALACSEHYQPRFSGDALPATATGTVVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF------------- 528 KL+TL+ W I +P+G KDP+ALRR LG++RI++E ++ + + Sbjct: 466 KLETLVGIWGIGLQPTGEKDPFALRRHALGVLRILVEKQLAVDFVELLRTAHAQFAALPN 525 Query: 529 --IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 Q + F DRL+ L +R I+A+L E L IV + + EF + + Sbjct: 526 VTDSTQAIYEFSMDRLRGLLRERGHAPGEIDAVLALEPTRLDDIVARLVAVREFAALPEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KRI IL + +S + P + AEK L+A + +Q + + Sbjct: 586 GSLAAANKRISNILKKSDSAT--VSGGVQPALFVEAAEKALHAQLEQVAPRVQSQLAARD 643 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 644 YTGALTALAALREPVDTFFNDVMVNAEDPALRANRLALLGALHQQLNCVADISRLA 699 >gi|260495294|ref|ZP_05815421.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_33] gi|260197072|gb|EEW94592.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_33] Length = 686 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 199/728 (27%), Positives = 352/728 (48%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A DL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALADLKTNFERKLKNNRIKFDGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ +K D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGALTKAGEGFLKAHRIEEEQIEIVKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSDKN-----IRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR I + L Sbjct: 170 DFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINNLL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 229 LEDE-KADVDEALLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L + DN+ T +++ Sbjct: 504 LDTLEADKVLKADRAKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+ I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQAVKRVANIMKGNK------DITIKEKLFKTDIEKTLYTDSKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 G I++S+ K Y + L ++ I+ +FD V+V +D+ VRDNR++ L YI N+ Sbjct: 618 VGEEIEKSIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRINQLTYIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|282899452|ref|ZP_06307419.1| Glycyl and Arginyl tRNA synthetase [Cylindrospermopsis raciborskii CS-505] gi|281195716|gb|EFA70646.1| Glycyl and Arginyl tRNA synthetase [Cylindrospermopsis raciborskii CS-505] Length = 716 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 191/724 (26%), Positives = 319/724 (44%), Gaps = 81/724 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA A + +L+ G+ + + + TP RL + + GL Sbjct: 1 MTAFLLEVGTEELPASFLSSAITQWRSRIPQMLEAHGLPIEKVAVFGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP G KA +GF + G++ + D KGD + Sbjct: 61 SQQLDREEEIKGPPAQAAFKDGKPTKAAEGFAKKQGVELSALEVRSTD--KGDFIFVNKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R I ++L +VP + + + MRW + + RP++ ++ +L + Sbjct: 119 TPGRPITEILTELVPQWVWSLEGKRLMRWGSGDG-----RFSRPIRWLVALLDGD----- 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L+ + I++ HR P + + Y++ L V++ PE R I+ Sbjct: 169 VLPLELRNGEKIVKSDRISWVHRVLHPEAVSISHATEYVKTLANGYVIVSPEDREKIIVE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +R +G LL E LVE+ +G F+ ++L LP E+ + T+Q+ F Sbjct: 229 QVNRAVEELGGCTEIYPYLLAETTNLVEYPTAVVGRFEDEFLQLPTEVSTTVMVTHQRYF 288 Query: 291 VTR-TREGV-LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 R+G L F+ +SN + I GN RV+ ARL D F++ D Sbjct: 289 PVFKNRDGRELLPNFVTISNGDPA-KSDIIALGNERVIRARLADGRFFYEAD-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-- 406 L+K L++ + +L+ V F +G+ +V+RI + + I Q + Sbjct: 340 ------------LAKSLEEFLPQLET--VTFQEDLGSVRAKVTRIGNIAQVICQQLGLGE 385 Query: 407 -DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 + V RA +L KADL T++V EFPELQG +G++YA+ E+ AI EH PR Sbjct: 386 TETERVQRAALLCKADLVTQMVYEFPELQGIMGEKYALASREDEEVAKAIFEHYLPRNAD 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + +PT V LAD+LDTLI+ + + PSGS DP+ALRRA I+ I + I L Sbjct: 446 DILPTTLTGKIVGLADRLDTLISIFGLGLIPSGSSDPFALRRAANAIVNITWVANLPINL 505 Query: 526 SQFIEDQNL-----------------ILFFHDRLKLYLH-DRDIRHDLIEAILRPEN--- 564 +E FF R++ L ++ I +DL+ A+L ++ Sbjct: 506 EYLLEYTATSFAHTFHKDAQSLISILQEFFIQRIRTLLQEEKHIDYDLVNAVLGEQDPEY 565 Query: 565 -----DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQ 617 +LL I D +L + + EK + R ++ A + +++ + I+P Sbjct: 566 IERALQDLLDIRDRATYLQQIRHNGTLEKIYETINRSTRLAAQGDLDLQQLIPDELINPT 625 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDD 674 +E LY + Q + + Y + L I + FF D VLV D Sbjct: 626 LFQKSSETALYQALVALVPQTQLAQQTRNYQLLIGALEKIAPTVSQFFDGEDSVLVMDPD 685 Query: 675 REVR 678 ++ Sbjct: 686 PHIK 689 >gi|83746124|ref|ZP_00943179.1| Glycyl-tRNA synthetase beta chain [Ralstonia solanacearum UW551] gi|207742376|ref|YP_002258768.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum IPO1609] gi|83727307|gb|EAP74430.1| Glycyl-tRNA synthetase beta chain [Ralstonia solanacearum UW551] gi|206593766|emb|CAQ60693.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum IPO1609] Length = 697 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 211/719 (29%), Positives = 352/719 (48%), Gaps = 66/719 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAAAIAGVRRAAPDRELREK 73 Query: 71 LGPRVGA----GKKAI------DGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P A GK A +S G+++I+ +++ P K + L Sbjct: 74 VLPVNIAFDAEGKPAAPLVKKLAALAKSVGVESIAPETLERAPDGKAESLFYRYTARGAL 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + ++RP ++ +L +++I Sbjct: 134 LADGLQAALTQTIAGLPIPKVMTYQRPSG--DSVQFVRPAHRLIALL-----DDEVIPAR 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ + V+ R+ AI + A A Sbjct: 187 VLGLQSGNVTLGHRFLSAGEIVIPHATAYAGTLKSQGKVIAGYAERKEAIRAELLTAAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW ++ F++++L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVIYPCHFEEQFLEVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN+ A+D AI++GN RVV RL DA F++ D+ Sbjct: 305 LRNRFLIVSNL-ATDTPQAIIEGNERVVRPRLADARFFFEHDKK---------------- 347 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ L VV+H KIGTQ ERVSR++ + ++A + ADVA RA +L+ Sbjct: 348 ----KPLADRVPLLSR--VVYHNKIGTQLERVSRLQAIAGQLADKLGADVAHASRAALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEAADVALACSEHYQPRFAGDALPGTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ +E Sbjct: 462 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEVAAASFEG 521 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPDPAAITDFLYDRLRSYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696 >gi|163746094|ref|ZP_02153453.1| glycyl-tRNA synthetase subunit beta [Oceanibulbus indolifex HEL-45] gi|161380839|gb|EDQ05249.1| glycyl-tRNA synthetase subunit beta [Oceanibulbus indolifex HEL-45] Length = 768 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 253/777 (32%), Positives = 377/777 (48%), Gaps = 102/777 (13%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 PD L+E++SEEIPARMQ +A EDL ++ L E G+ Y + + TP RL L L + Sbjct: 15 PDLLIELFSEEIPARMQKRAGEDLQKLVTNGLVEAGLTYGSAAVFTTPRRLTLALGDMLA 74 Query: 62 HSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 SP ++EER GP+ A +KAI+GFLR GL + +D KG V+ A + KP R Sbjct: 75 ASPRQVEERKGPKADAPEKAIEGFLRGAGLTRDQLEE--RDTPKGKVFFAKIEKPGRPAA 132 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 +++ ++ I+ PWPKSMRW T + W+RPL SILCI + ++A +++ L + Sbjct: 133 EIVAEVLEQTIRNFPWPKSMRWGTG-----SLKWVRPLHSILCI-INDEAGAEVVPLTVD 186 Query: 182 EIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGL 241 I GN T GHRF AP I+V + Y L A V+LDP R + I NDA +A A GL Sbjct: 187 GITAGNTTRGHRFLAPGEIEVAGFEDYQTKLARASVVLDPAARADTIWNDATNMAFAAGL 246 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 E+VED LL E+ GLVE+ V MG + +L LP E+++ ++K +QK F R + Sbjct: 247 EVVEDAGLLAEVAGLVEYPVVLMGRIGEDFLGLPPEVLQTSMKEHQKFFSVRNPKSGQIE 306 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F+ V+N +D GA I+ GN +V+ ARL DA FW D + + Sbjct: 307 RFVTVANRTTADDGATILAGNEKVLGARLSDAKFFWDNDLRTVTAEGGMATWVKA----- 361 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 + +V FH K+GTQ E + R+ L +++A L+ AD ++A ++KAD Sbjct: 362 ------------LENVTFHNKLGTQAELIDRMATLSRELAPLVGADADEAEQAARVAKAD 409 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L +E+V EFPELQG +G YA + + DA ++H P GP ++VPT +SI V+LA+ Sbjct: 410 LSSEMVYEFPELQGLMGSYYARKAGLSDAVADAAKDHYAPLGPSDDVPTAPVSIAVALAE 469 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ---FIEDQNLILFF 538 K+D L FWAI+EKP+GSKDP+ALRRA LG+IRI++EN + + + + + Q+ F Sbjct: 470 KIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRILVENDVSLAVLESGIWPAIQSHPFPF 529 Query: 539 HDRLKLYLHDRDI------------------RHDLI-----------EAILR-------- 561 D L+ + +L+ EA Sbjct: 530 ADVLRKIEDHEGLLATLRGGKLPIGPIEMDRDGELVQKISDLAIAEQEATRAKLFSILGN 589 Query: 562 ---PENDNLLTIVDLIK--------------HLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 +D L I D +K S + A+ + + L ++ Sbjct: 590 LHFKSSDLLSFIHDRLKVYLRDQGIRHDIIDACIAMDGSDDLTLLVKRARALSETLKTDD 649 Query: 605 KKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD------------ 652 +N + + L E E+ K D Sbjct: 650 GENLIQGFKRANNILSQAEEADGVEYSFGADPKFAETEAEKDLFAALDKAEAKITPAMAA 709 Query: 653 --------LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + PI+ FF+ V VN ++ VR NRL+LL I+ I V ++ K+ Sbjct: 710 QDFSTAMAAMAELRGPIDAFFEAVQVNANNPTVRRNRLNLLSRIRTICSAVADLTKL 766 >gi|89100474|ref|ZP_01173336.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. NRRL B-14911] gi|89084817|gb|EAR63956.1| glycyl-tRNA synthetase beta subunit [Bacillus sp. NRRL B-14911] Length = 690 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 200/730 (27%), Positives = 347/730 (47%), Gaps = 76/730 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D LLEI EE+PAR + L+ + L+E+ V + + + TP RL + +K +S Sbjct: 5 DLLLEIGLEEMPARFVTDSINQLASKVEKWLEEKKVPHGGISAFSTPRRLAVLVKDVSET 64 Query: 63 SPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR- 114 + EE GP G KA GF R G+ I G Y V + Sbjct: 65 QEDIHEEAKGPARKIAQNEAGEWSKAAIGFSRGQGMDVDD---IYFKEINGIEYAHVNKF 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +L + + + +PK+MRW+ ++RP+K I+ + + Sbjct: 122 IKGAETASILPE-LKDITESLTFPKNMRWADRD-----MRYVRPIKWIMALFGQD----- 170 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I ++ +P N T GHRF +++ Y + L VL++ E R++ I + R Sbjct: 171 VIPFEIAGVPASNWTLGHRFLG-EKVELTEPAEYEKSLLGQFVLVNAEERKSGIRSQIER 229 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 LA + D+DLLEE+ LVE+ G F++++L +PEE++ ++K +Q+ F ++ Sbjct: 230 LAEENNWVIPVDEDLLEEVTNLVEYPTALFGKFEEEFLEIPEEVLITSMKEHQRYFPVKS 289 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L F+ V N + + +GN +V+ ARL DA F++ DQ Sbjct: 290 AEGKLLPYFVTVRNGD-HNHLEQVAKGNEKVLRARLADAAFFYQEDQKMD---------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALV 411 ++ + +L +V+H +IGT E+V R+R L ++A+ + + V Sbjct: 339 ----------IESALQKLG--SIVYHEEIGTLAEKVERVRKLANELAESLSLNPEEKKTV 386 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 DRA +SK DL +++V EFPELQG +G++YA + E+ + AI EH PR ++ P + Sbjct: 387 DRAAEISKFDLVSQMVYEFPELQGFMGEKYAAQKGEDAAVAKAINEHYMPRNAEDSAPES 446 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 +++A+KLDT+ +F+AI PSGS+DPYALRR GI++I+ + L + I+ Sbjct: 447 NEGAVLAVAEKLDTISSFFAIGMIPSGSQDPYALRRQAAGIVQILAVKGWKLELEEVIKK 506 Query: 531 ------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L+ FF R+K L +R IR+D+I+A+L + ++ +++ Sbjct: 507 SLALVKESGVGKKEEEQVYDELLSFFKLRIKHTLQERSIRYDIIDAVLSGKIGSMASLIK 566 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 + LN ++ + + R+ I + E + + E LY+ Sbjct: 567 RAEVLNAHKGEDGFKESMEALSRVLNIASKA-----EHPAAVDQGLFENKEETELYSRFL 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + I ++ + Y LL S+ I +F+ +V D+ +++NRLS++ I ++I Sbjct: 622 EVSAKIGNGVEEEEY---YMLLVSMRPEIGAYFENTMVMADNTALKENRLSMMAEIASLI 678 Query: 693 LIVINVQKIV 702 V +IV Sbjct: 679 QAFAKVNEIV 688 >gi|207727975|ref|YP_002256369.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum MolK2] gi|206591218|emb|CAQ56830.1| glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum MolK2] Length = 697 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 211/719 (29%), Positives = 353/719 (49%), Gaps = 66/719 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAAAIAGVRRAAPDRELREK 73 Query: 71 LGPRVGA----GKKAI------DGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P A GK A +S G+++I+ +++ P K + L Sbjct: 74 VLPVNIAFDAEGKPAAPLVKKLAALAKSVGVESIAPETLERAPDGKAESLFYRYTARGAL 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + ++RP ++ +L +++I Sbjct: 134 LADGLQAALTQTIAGLPIPKVMTYQRPSG--DSVQFVRPAHRLIALL-----DDEVIPAR 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ + V+ R+ AI + + A A Sbjct: 187 VLGLQSGNVTLGHRFLSAGEIVIPHATAYASTLKSQGKVIAGYAERKEAIRAELLKAAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW ++ F++++L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPMIYPCHFEEQFLEVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN+ A+D AI++GN RVV RL DA F++ D+ Sbjct: 305 LRNRFLIVSNL-ATDTPQAIIEGNERVVRPRLADARFFFEHDKK---------------- 347 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ L VV+H KIGTQ ERVSR++ + ++A + ADVA RA +L+ Sbjct: 348 ----KPLADRVPLL--ARVVYHNKIGTQLERVSRLQAIAGQLADKLGADVAHASRAALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEAADVALACSEHYQPRFAGDALPGTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------- 530 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ +E Sbjct: 462 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEVAAASFEG 521 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPDPAAITDFLYDRLRSYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696 >gi|313633241|gb|EFS00110.1| glycyl-tRNA synthetase, beta subunit [Listeria seeligeri FSL N1-067] Length = 688 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 340/731 (46%), Gaps = 76/731 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + E L + L+E + + ++ + +P RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAQYVTSSVEQLKKRMRDWLEENQIAFAEIKTFSSPRRLTVLVEDM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S ++ + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDEEGNWSKAALGFAKSQKIEPAD---LTFREIKGVEYIYI 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 ++ L + + + +P SM W +IRP+K ++ + E Sbjct: 118 KKEVIGEXXXALLPALQKVVTSMTFPVSMHWGNND-----LRYIRPIKWLIAMFGQE--- 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 II ++ + N + GHRF ++ Y L E V++D R+ AI Sbjct: 170 --IIPFEITGVTTSNTSRGHRFLG-KTTTIKQPSDYQNALLEQFVVVDATERKEAISGQL 226 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LAS ++ ED DLLEE+ LVE+ V G+F+++YL LPEE++ T+K +Q+ F Sbjct: 227 KELASLENWQIKEDADLLEEVTNLVEYPTVLAGNFEEEYLELPEEVLITTMKEHQRYFPV 286 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++G L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 287 FSQDGKLLPHFVTVRNGN-HENIETVARGNEKVLRARLSDADFFYQED------------ 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L + + +A+L ++VFH K+GT E++ R++ + IA +D AD Sbjct: 334 --------LKMTIAEAVAKL--PNIVFHEKLGTLTEKMKRVQKVALMIADYLDWKEADKE 383 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P+ +P Sbjct: 384 DIIRLTDIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKTAIATAIREHYLPKSAEGELP 443 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +ADKL+T + F+ +N P+GS DP+ LRR+ G +RII N DIP+ + + Sbjct: 444 QTDLGSXXXIADKLETFVGFFCVNIVPTGSADPFGLRRSAFGAMRIIQANGWDIPVLELL 503 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + F +RL++ L + IRHD+I+A++ + + + + Sbjct: 504 SRIVDMERVEGAVELPSDDVKREVQTFLKNRLRVVLQNHHIRHDIIDAVIGGDPNVIPQL 563 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 VD + LN+ S + + R+ I E+ +E+ P E E L+ Sbjct: 564 VDRAQILNKHVESEWFRPTVEALTRVLNISKKYEE-----GVEVDPALFENEYEHALFDK 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + +R + I+ +FD LV D+ E+++NRL+LL + + Sbjct: 619 LEKLKYDYASLTILER----LKAFAGLRTTIDDYFDNTLVMSDNLELKNNRLALLFELAS 674 Query: 691 IILIVINVQKI 701 I + +I Sbjct: 675 FIKEFAQMDEI 685 >gi|15673078|ref|NP_267252.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis Il1403] gi|25009321|sp|Q9CGK0|SYGB_LACLA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|12724052|gb|AAK05194.1|AE006341_13 glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis Il1403] gi|326406646|gb|ADZ63717.1| glycyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis CV56] Length = 673 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 215/717 (29%), Positives = 348/717 (48%), Gaps = 63/717 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + LKE + + + ++ TP RL + ++GL+ Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMETFLKENRLEFDKIIKFSTPRRLAIIVEGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G KGD Y A Sbjct: 61 EASEAIDEEVKGPSAKIAKDAQGNWSKAIQGFSRGQGATPDDLIL------KGDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HIDGVKAEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++ DL ++ + GHRF A +++++ + Y + E VL+D E R+ I Sbjct: 165 KVVAFDLLDVTANRFSRGHRFLANVEVELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENKWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNAEN-IENVVLGNEKVLVARLEDAEFFWKEDQKL---------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK---IAQLIDADVAL 410 ++ +A+L V FHAKIG+ E ++R + + K IA L D + Sbjct: 334 ----------KIEDLVAKL--AKVTFHAKIGSITEHMARTKEIAAKLADIAGLTDEEKRD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVSAAIREHYMPTSAEGELPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---- 526 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 527 --QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + ++ F R++ L ++ RHD++EA + N ++ +++ ++ Sbjct: 502 QFEGENHLEILDFVKARIQKLLLEKLDRHDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + + R ++ + EI+P +AE+ LY V+ Sbjct: 562 PFKPAIENVSRSINLVKKAKDIK-----EINPTLFEEDAEEALYNVVISLQNQWTYMPGE 616 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +++ I HS+ IE FF+ V+V +D VRDNR++LL + + ++ + I Sbjct: 617 EKFRAIV---HSLAPAIETFFESVMVMAEDLSVRDNRIALLSEVVALTSVMADFSLI 670 >gi|312866358|ref|ZP_07726576.1| glycine--tRNA ligase, beta subunit [Streptococcus downei F0415] gi|311098052|gb|EFQ56278.1| glycine--tRNA ligase, beta subunit [Streptococcus downei F0415] Length = 679 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 190/712 (26%), Positives = 328/712 (46%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK+ + + +++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMAAFLKDNRLSFDSIKTFSTPRRLAVRVMGLADKQEDLSEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T I+ KG+ Y+ V ++ + + Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFRQVKGEEYVYVTKQEAGQPAEAVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 VP + + +P SM W++ +F +IRP+ ++ +L ++ +++D +I G Sbjct: 132 GVPEVLNSLTFPVSMHWASN-----SFEYIRPVHTLTVLL-----DDQALNMDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF ++ + D Y DL + V+ D + R+ I+ + + + + D Sbjct: 182 RVSRGHRFLGQET-QICTGDSYEDDLRKEFVIADSQERQGMIVEQIKAVEAEQNVSVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMG FD+KYL +PEE++ ++K +Q+ FV R + G L F+ V Sbjct: 241 PDLLNEVLNLVEYPTAFMGHFDEKYLEVPEEVLVTSMKNHQRYFVVRDQSGQLLPNFVSV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N +++GN +V+ ARLED FW DQ + Sbjct: 301 RNGN-EHYLENVIKGNEKVLVARLEDGEFFWHEDQKL--------------------KIA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L V FH KIG+ E ++R ++ +A+ + + +DRA + K DL Sbjct: 340 DLVAKLS--HVTFHEKIGSLSEHMARTSLIADYLAKTVGLTADETKDLDRAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLDGEEAPVATAIREHYLPDSADGVLPQTKVGAVLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ +P+ Q Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDSFGWAVPMDQLVDNLYDLSFDSLTYA 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 Q ++ F R+ + + D+ EA+L + ++ + L + + Sbjct: 518 HKQEVMDFIAARVDKMM-GSGVSKDIREAVLAGSTFVVPQMLAAAQALQAASQADNYKPA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R+F + + ++P + EK L ++D + Sbjct: 577 VESLSRVFNLAEKA-----PADVAVNPSLFENDQEKALAQSLADLQL-------SDDVKE 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ I+ FFD +V DD +++NRL+LL + V K+ Sbjct: 625 NLTQFFALSPVIDAFFDNTMVMSDDETLKNNRLALLSELAKKARTVAAFNKL 676 >gi|262282187|ref|ZP_06059956.1| glycyl-tRNA synthetase subunit beta [Streptococcus sp. 2_1_36FAA] gi|262262641|gb|EEY81338.1| glycyl-tRNA synthetase subunit beta [Streptococcus sp. 2_1_36FAA] Length = 679 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 208/725 (28%), Positives = 342/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + ++ + + TP RL + + GL+ Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMGAFLTDHRLTFEKIEMFSTPRRLAVRVVGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA +GF+R GL I KG+ Y+ V + Sbjct: 63 KQSDLTEDFKGPSKKIALDADGNFTKAAEGFVRGKGLTVED---ITFREIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R +E+++ V +Q + +P SM W+ F +IRP+ ++ +L E Sbjct: 120 EEIGRPVEEIIPA-VTEVLQALTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DE 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + DLD +I G + GHRF ++ S D Y DL V+ P R + I+ Sbjct: 169 EAFDLDFLDIKSGRTSRGHRFLGQET-EIASADSYEDDLRAQFVIASPLERGDMIVEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 L G+ + D+DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R Sbjct: 228 ALEEEHGVSIEIDEDLLNEVLNLVEYPTAFLGNFDAKYLEVPEEVLVTSMKEHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L FI V N A + +++GN +V+ ARLED FW+ DQ Sbjct: 288 DAEGKLLPHFISVRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLA--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVAL 410 + + +L +V FH KIG+ E + R + +AQ + A Sbjct: 338 -----------IADLVEKLG--NVTFHEKIGSLAEHMERTGKIAALLAQEAGLDADEAAD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 LARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENAAVAAAIREHYMPTSADGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 K+ ++LADKLDT+++F+++ PSGS DPYALRRAT G++RI+ + +I L+Q Sbjct: 445 TKVGAVLALADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWNIDLAQLVS 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + DR+I D++ A+L+ + +V+ Sbjct: 505 RLYELEFDSLSYDNQEAVLDFFRARVEKMM-DRNIPKDIVTAVLQSTQFVVRDLVETAAL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + + + ++P + EK L I Sbjct: 564 LAEKAQEDNFKSAVESLSRVFNLAEKAQGQ-----TAVNPALFENQEEKDLATAIEKVEL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D L ++ I+ FFD +V +D VR+NRL+LL + + Sbjct: 619 -------TSDLATNLDQLFALSPVIDAFFDHTMVMAEDEAVRNNRLALLSSLTAKAGQMA 671 Query: 697 NVQKI 701 +I Sbjct: 672 QFNQI 676 >gi|257063815|ref|YP_003143487.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Slackia heliotrinireducens DSM 20476] gi|256791468|gb|ACV22138.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Slackia heliotrinireducens DSM 20476] Length = 694 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 202/733 (27%), Positives = 325/733 (44%), Gaps = 73/733 (9%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + EI +EE+PA H A L ++ LL+ + + + + Y TP RL + Sbjct: 1 MANKTLAFEIGTEELPAFALHDATVQLPGLVAQLLEAKRIPHGAIDVYTTPRRLITLVAD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + E GP G KA GF R G+ S +++ + + VY A Sbjct: 61 VPEATEASEEVFRGPAARIAFDADGNPTKAALGFARGKGVDA-SALELRNENGEDYVY-A 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V + R + +L ++ I+ + WPKS RW + RP++ IL +L Sbjct: 119 VKKTESRDVAALLPEVLLNTIEGISWPKSQRWGAHTEL-----FSRPIRWILALL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E ++ L + G T GHRF AP +++ D + + A V+ + R +I Sbjct: 169 GETVVPLSYAGLESGRTTRGHRFLAPAEVEIACADDLLPAIRAAYVVPSEDEREASIRKQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + +GL + E+I L E+ V +G+FD+ +L +P+E+I + +Q+ F Sbjct: 229 IAAKEAELGLVADLPAKTMAEVINLTEYPTVMVGTFDELFLSVPKEIIVDAMLMHQRYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +EG L N F++ SN + A I+ GN RVVAARL DA F+ D Sbjct: 289 LFDQEGKLVNKFLITSNGDPA-FEANIIDGNQRVVAARLYDAKFFYDED----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--- 408 L KPL+ + LD VVF K+GT + +R+ L A D Sbjct: 337 ---------LKKPLEDYVNSLD--QVVFQEKLGTTLAKTTRVVRLAGFAADDAKVDAQVR 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA L+KADL T V EF +QG +G YA E +AI +H +PR + + Sbjct: 386 ADAQRAAYLAKADLVTGAVVEFTSVQGIMGSYYAKAAGETDEVANAIADHYRPRFAGDEL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------LENKI 521 P V+ ADKLDT+ +AI + P+GS DP+ALRRA +GI+ I+ L + I Sbjct: 446 PRGMAGRIVAFADKLDTITGLFAIGQAPTGSSDPFALRRAAIGIVGILNAGLNVSLGSAI 505 Query: 522 DIPLSQFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 D+ L+ + D + ++ FF R K+ L D D I+A+L I Sbjct: 506 DVALANYRADGLEFDFAEVKKAVVDFFVTRTKVILKDEGNASDAIDAVLACGVTEPAVIA 565 Query: 572 DLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +K L + + ++ R + ++ ++ + + +AE+ LY Sbjct: 566 SRVKALTAAREQNRETMDNLAVAFARANNL------RDPKLGTDCNTALF-NQAEQNLYD 618 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + E++ Y L + +P++ FF+ V+V +D VR NRL LL Sbjct: 619 AAHAASIAVDEALAADDYTAALGRLAELRQPVDAFFEDVMVMDEDSAVRVNRLKLLNEFV 678 Query: 690 NIILIVINVQKIV 702 N+ V + ++ Sbjct: 679 NVFANVADFGQLA 691 >gi|78049866|ref|YP_366041.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038296|emb|CAJ26041.1| glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 746 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 195/782 (24%), Positives = 330/782 (42%), Gaps = 119/782 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + + ++ L++ GV + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLEQAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGS 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHGGAVSLAAPGDYVDALRAAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAVRQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI + D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIHSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+GT ++V+R+ L + IA I AD Sbjct: 348 G----------------------EGLSSVTYQAKLGTVADKVARVAALAEAIAPQIGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAEAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKKL 505 Query: 529 -------------------------------------------------IEDQNLILFFH 539 +D + F Sbjct: 506 LVEARNQINVQASARQTLKTEAALSKAKDAGAALPKSVEKEAHTALAQSGQDAEIFDFIL 565 Query: 540 DRLKLYLHDRDIRHDLIEAILR--------------------PENDNLLTIVDLIKHLNE 579 DRL+ Y D+ + A+ + +L I + Sbjct: 566 DRLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTNVGAHPGATHASLYDFDRRIDAIGI 625 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + + + + KRI IL K EI +I L AE+ L + Sbjct: 626 FATLPEADALAAANKRIRNILR---KVEGEIPGDIDTSLLREPAEQALAEAVEAAIGDTG 682 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V ++ Sbjct: 683 DALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKLGDRLGSVAAIE 742 Query: 700 KI 701 + Sbjct: 743 HL 744 >gi|17545243|ref|NP_518645.1| glycyl-tRNA synthetase subunit beta [Ralstonia solanacearum GMI1000] gi|25009329|sp|Q8Y213|SYGB_RALSO RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|17427534|emb|CAD14052.1| probable glycyl-trna synthetase beta chain (glycine--trna ligasebeta chain) (glyrs) protein [Ralstonia solanacearum GMI1000] Length = 697 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 209/719 (29%), Positives = 352/719 (48%), Gaps = 66/719 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAASITGVRRAAPDRELREK 73 Query: 71 LGP----------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAVLRKPKRL 119 + P K + +S G TI+ +++ P K + + Sbjct: 74 VLPVNIAFDAEGKPTAPLTKKLAALAKSIGADTIAPESLERAPDGKAESLFHRYTARGAV 133 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + D L+ + I +P PK M + + ++RP ++ +L ++II Sbjct: 134 LADGLQAALSQTIAGLPIPKVMIYQRPNG--DNVQFVRPAHRLIALL-----DDEIIPAG 186 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASA 238 + + GN+T GHRF + I + Y L+ + V+ R+ AI + + A A Sbjct: 187 VLGLQSGNVTLGHRFLSAGEIIIPHATAYASTLKSQGKVIAGYAERKEAIRAELLKAAGA 246 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 +V + LL+E+ LVEW V+ F++++L +P+E + LT++TNQK F +G Sbjct: 247 D--TVVMPEALLDEVNALVEWPVVYPCHFEEQFLAVPQECLILTMQTNQKYFALTDAQGH 304 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N F++VSN+ A++ AI++GN RVV RL DA F++ D+ Sbjct: 305 LRNRFLIVSNL-ATETPQAIIEGNERVVRPRLADARFFFEHDKK---------------- 347 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 KPL R+ +L VV+H KIGTQ ERVSR++ + ++A+ + A+VA RA +L+ Sbjct: 348 ----KPLADRVPQL--ARVVYHNKIGTQLERVSRLQAIAGQLAEKLGAEVAHASRAALLA 401 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P V+ Sbjct: 402 KADLLTDMVGEFPELQGTMGTYYARHDGEAEDVALACSEHYQPRFAGDALPGTATGTVVA 461 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED------- 531 LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ +E Sbjct: 462 LADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEAAAASFEG 521 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + F +DRL+ YL D+ + +EA++ L IV ++ + F + Sbjct: 522 IAAVKPDLAAITDFLYDRLRGYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFAAL 581 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 582 PQAEALAAANKRITNIL----KKTDITIGSVQPQLLREDAERALHQAVATSEPHVHDAFA 637 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + L S+ E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 638 RGDFTTALKTLASLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696 >gi|332703856|ref|ZP_08423944.1| Glycyl-tRNA synthetase beta subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554005|gb|EGJ51049.1| Glycyl-tRNA synthetase beta subunit [Desulfovibrio africanus str. Walvis Bay] Length = 696 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 194/704 (27%), Positives = 314/704 (44%), Gaps = 63/704 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP F+ EI +EE+PAR + +L+ L L E V + Y TP RL + ++ Sbjct: 1 MPQFVFEIGTEEMPARFVPALSSELAASLFSRLAEAKVDCGEIHTYGTPRRLVAMVADMA 60 Query: 61 PHSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++EE GP KA GF S G+ S ++ KG Sbjct: 61 ESQRSEVEEVTGPPARIAFDAEGKLTKAGLGFAGSQGVPPESLYTVET--PKGAYLATKK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 D+L + A+ + +PK M W + F++ RP++ I+ +L +E Sbjct: 119 ATGGARSIDILPALCQAAVSALNFPKKMHWGSGD-----FTFGRPIRWIVAMLGSE---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 II L + N+T+GHR P + + Y + E V+LDP R + I Sbjct: 170 -IIRFSLAGVESSNLTWGHRVMGAGPFAIARAEDYQLVIREQGKVVLDPTRRLDIIRKLG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A A G +V + LLEE++ LVE + SFDK YL LP E++ +++++QK F Sbjct: 229 NASAEAEGGSVVWKQSLLEEVVNLVEHPIPVLASFDKAYLELPREVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + ++G L F+ V N++ D + +G RV+ ARLEDA FWK D Sbjct: 289 QGKDGKLLPFFLTVINLEPKD-EDLVRKGWERVLKARLEDARFFWKGD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL-V 411 LS+ D +LD V F +G+ G++ R+ L +AQ I ++ L + Sbjct: 336 --------LSRDFDYWCRKLD--SVTFLGPLGSMGDKSRRLERLCGYLAQQISPELLLDL 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 A +L+K DL T++V EF LQG +G YA + + + AI E P GP P + Sbjct: 386 SAAGLLAKCDLVTDMVGEFDTLQGIMGGIYARKKGKGETVAQAIAEQYLPTGPDSPTPQS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +++ADK DTL + ++ P+G+ DPYALRR LGI RI++++ + + L+ + Sbjct: 446 LAGALLAMADKADTLAGTFGLDMVPTGAADPYALRRQALGICRIVIDHGLRLSLTDLLRT 505 Query: 532 QNL------------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + FF R+K Y + ++EA L D++ Sbjct: 506 AHGVYGDVQWKLAPDESLRKLLDFFGQRIKAYFTAKGHETLVVEACLGAGIDDIWAFSRR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L+EF E+ +L+ KR I+ + + + + L E E+ L I Sbjct: 566 LEALSEFSRGEGFEQAVLTFKRAANIIRKQGSEAGVALDGAYEKRLLESEHERELAQAIE 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 Y + LL + ++ FFD V+V +D Sbjct: 626 AVSPRFDALWAQDDYASLMSLLAELRPYVDRFFDNVMVMAEDPA 669 >gi|81298829|ref|YP_399037.1| glycyl-tRNA synthetase subunit beta [Synechococcus elongatus PCC 7942] gi|81167710|gb|ABB56050.1| glycyl-tRNA synthetase, beta subunit [Synechococcus elongatus PCC 7942] Length = 728 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 195/760 (25%), Positives = 339/760 (44%), Gaps = 93/760 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A L L E + + Y TP RL + ++GL Sbjct: 1 MPAFLLEVGTEELPASFVAAAIAQWQNWLPTRLAEAQLTTTQISVYGTPRRLAVLIEGLP 60 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A A GF R G++ ++ KG R Sbjct: 61 DRQPDREEEVKGPPASAAFKDGEPTPAAIGFARKQGVEVSD--FTVRETDKGAFVFVQKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + + DVL+++VP IQ + + MRW + RP++ ++ + ++ Sbjct: 119 EVGQPLADVLQSLVPSWIQDLEGKRFMRWGDGD-----LRFSRPIRWLVAL-----IDDQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L + ++ GHR P P+ + Y+ LE A VL+DP R+ I Sbjct: 169 VLPLELTSGGSTVQSDRLSRGHRVLHPEPVAIAQASDYLATLEAASVLVDPAQRQAKIEA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +AS VG + +DLL E++ L EW +G F++++L LP E+ + + ++Q+ F Sbjct: 229 QTAAIASKVGGQAELPEDLLAEVVHLTEWPTAVLGQFEERFLSLPAEVSTMVMTSHQRYF 288 Query: 291 VTR-----------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 L CF+ +SN + I GN+RV+ ARL D +F++ Sbjct: 289 PIYQATAQRDPAAIDARSELLPCFVTISNGDPA-ASETIAAGNARVIRARLADGEYFYRT 347 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D +PL+ +++L+ V F ++G+ +V RI + + Sbjct: 348 DSK--------------------QPLESFLSQLEA--VTFQEQLGSVRSKVDRIGAIAHR 385 Query: 400 IAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + + +D LV RA L KADL +++V EFPELQG +G++YA + E + AI Sbjct: 386 LCDQLSIHSSDRLLVSRAAQLCKADLVSQMVYEFPELQGVMGEKYARVSQEPDAVATAIR 445 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH P+G + +P V+LAD+LDTL+ + + PSGS DP+ALRRA G++ I+ Sbjct: 446 EHYLPKGAGDQLPQTLTGRMVALADRLDTLVCIFGLGLLPSGSSDPFALRRAANGVLNIL 505 Query: 517 LENKIDIPLSQFIE--------------------DQNLILFFHDRLKLYLHD-RDIRHDL 555 + ++ + L+ I+ Q L FF RL+ L D + I +DL Sbjct: 506 WDGQLRLDLTALIQGIAADFHHAFPKLAGNAETLIQQLTDFFGQRLRTLLQDEQGIDYDL 565 Query: 556 IEAILRPEN--------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EK 605 + A+L + + L ++ K L + + R ++ + + Sbjct: 566 VNAVLGDGDANYLLRAIADPLDALNRAKLLQTLRQDGRLVALYETVNRATRLASKGDLDT 625 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + + ++ +E + ++ + + Y + + L + ++ FF Sbjct: 626 ATLDPTGLVNADLFQQPSEAAFLSALTTLQPLATAAQASQAYEPLVEGLLTAAPAVQSFF 685 Query: 666 D---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D VLV D ++ NRL+LL ++N ++ + IV Sbjct: 686 DGDTSVLVMDPDPAIQQNRLNLLGLLRNQARVLADFGAIV 725 >gi|296877058|ref|ZP_06901099.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 15912] gi|296431919|gb|EFH17725.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 15912] Length = 678 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 202/712 (28%), Positives = 336/712 (47%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 VP + + +P SM W+ F +IRP+ ++ +L E +DLD +I G Sbjct: 132 SVPELLASLTFPVSMHWANN-----TFEYIRPVHTLTVLLGNEA-----LDLDFLDIQSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ + Sbjct: 182 RVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQIE 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI V Sbjct: 241 EGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGQLKPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 340 DLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVSRAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSYD 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ +A+L N + +++ + L+E + + Sbjct: 518 NQAEVLNFIKARVDKMMG--RTPKDIKDAVLAGSNFVVADMLEAAEALSEASKTDGYKAA 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+ + + EK L I D + S K Sbjct: 576 VESLSRAFNLAEKA-----DASVAVDASLFENDQEKALAKAIEDL--ELTGSASDK---- 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 625 -LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANAVAAFNQL 675 >gi|256027636|ref|ZP_05441470.1| glycyl-tRNA synthetase beta chain [Fusobacterium sp. D11] gi|289765594|ref|ZP_06524972.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D11] gi|289717149|gb|EFD81161.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. D11] Length = 686 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 198/728 (27%), Positives = 351/728 (48%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A DL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALADLKTNFERKLKNNRIKFDGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ +K D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGALTKAGEGFLKAHRIEEEQIEIVKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + + RP++ L + +K++ Sbjct: 120 GKPTETILPKILKALVLEETFPKSMRWSDKN-----IRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR I + Sbjct: 170 DFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINNSL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 229 LEDE-KADVDEALLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L + DN+ T +++ Sbjct: 504 LDTLEADKVLKADRAKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+ I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQAVKRVANIMKGNK------DVTIKEKLFKTDVEKTLYTDSKR 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 G I++S+ K Y + L ++ I+ +FD V+V +D+ VRDNR++ L YI N+ Sbjct: 618 VGEEIEKSIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRINQLTYIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|295675499|ref|YP_003604023.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1002] gi|295435342|gb|ADG14512.1| glycyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1002] Length = 699 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 207/716 (28%), Positives = 340/716 (47%), Gaps = 63/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + ++ TP RL + + + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGEPSFERFATPRRLAVTIHNVRAVAPEKHVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P + G + L + G T++D + +D K + + P + D Sbjct: 79 VLPVSVALDKDGQPTAPLAKKLAALGFPDFTVNDLERAQD-GKAEAFFLRYAAPGATLAD 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L+ + + K+P PK M + S+ ++RP+ + + E+I+ + Sbjct: 138 GLQAALDETLGKLPIPKVMTYQRPDG--SSVQFVRPVHRLTAL-----HGEEIVPVSALG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGL 241 I + T GHRF + +++Q Y LE V+ R+ AI + LA A Sbjct: 191 IDADDTTLGHRFLSEGFVQIQHAQSYAETLEHRGRVIASFARRKEAIRSQL--LAHAAED 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 ++V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 KVVMPEALLDEVTSLVEWPVVYECRFEDEFLQVPQECLILTMQTNQKYFALTDANGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ + IV+GN RVV RL DA F+ +D+ Sbjct: 309 RFLIVSNIETATPVE-IVEGNERVVRPRLADAKFFFTQDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 KPL R+ L +VV+H K+G+ +RV R+ L IA + ADVA RA L+KAD Sbjct: 349 -KPLADRVPLL--ANVVYHNKLGSALQRVERLEGLAGAIAAMTGADVARATRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +PT + V+LAD Sbjct: 406 LITDMVGEFPELQGTMGTYYARHDGEQEEVALACSEHYQPRFSGDALPTTETGTVVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--------- 532 KL+TL+ W I +P+G KDP+ALRR LG++RI++E ++++ + Sbjct: 466 KLETLVGIWGIGLQPTGEKDPFALRRHALGVLRILIEKQLNVDFVDLLRIAYAQFAGMPN 525 Query: 533 ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + F DRL+ L +R I+A+L L IV + + EF S A+ Sbjct: 526 VADATDAIYEFSMDRLRGLLRERGYAAGEIDAVLALNPTRLDDIVARLDAVREFASLAEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KRI IL +K + + P L AEK L A + +Q + + Sbjct: 586 ASLAAANKRISNIL---KKSEGVTNGGVQPGLLTEAAEKALNAQLEQVTPRVQSQLAVRD 642 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ EP++ FF+ V+VN +D +R NRL+LL + + V ++ ++ Sbjct: 643 YTGALTALAALREPVDTFFNDVMVNSEDPALRANRLALLGALHQQMNCVADISRLA 698 >gi|285016900|ref|YP_003374611.1| glycyl tRNA synthetase, beta subunit protein [Xanthomonas albilineans GPE PC73] gi|283472118|emb|CBA14625.1| probable glycyl trna synthetase, beta subunit protein [Xanthomonas albilineans] Length = 716 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 190/748 (25%), Positives = 329/748 (43%), Gaps = 85/748 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLKG 58 M L+E+ +EE+P + A+ L +I L + G+ + + TP RL + L G Sbjct: 3 MHPLLIELGTEELPVKALPGLAQALFDGVIAGLDKRGIAVERGDAKPLSTPRRLAVLLPG 62 Query: 59 LSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ PE+ E LGP G KA++GF G+ + + KG+ ++ Sbjct: 63 VAAEQPEQRAEVLGPYLNIALDADGQPTKALEGFAAKAGIAWTALE--RTRDAKGERFVH 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 P +L I+ AI +P PK MRW + + RP++ ++ +L Sbjct: 121 RAVHPGARTATLLPDILREAIAAMPIPKPMRWGDHD-----YGFARPVQWLVLLL----- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++ L + + GHRF P+ + Y+ L+ A VL+DP+ RR I+ + Sbjct: 171 GNEVVPAHLLGVQADRHSRGHRFLHDAPVTLAQPGDYVAALQAAQVLVDPDVRRARIVAE 230 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A G +D L +++ LVEW + F+ +L +P+E + T+++NQK F Sbjct: 231 VEQAARQAGGRARIAEDNLAQVVNLVEWPSAVLCRFEPAFLAVPQEALIETMESNQKFFP 290 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L FI ++NI + D A + +G RV+ R DA F+ D + Sbjct: 291 VLDADGKLTEHFIGIANIVSRD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLEAMGV- 348 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + V + AK+G+ ++V R+ L + IA + AD A Sbjct: 349 ---------------------GLAGVTYQAKLGSLADKVRRVAALAEAIAAQVGADPAQA 387 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSK DL + +V EFPELQG G+ YA E AI+E +PR +++ + Sbjct: 388 RRAAELSKNDLQSRMVNEFPELQGIAGRYYASAAGEPRDIALAIDEAYQPRFAGDDIALS 447 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ---- 527 + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ LS+ Sbjct: 448 PLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDVDLSEALVA 507 Query: 528 ----------------------------------FIEDQNLILFFHDRLKLYLHDRDIRH 553 Q + F DRL+ Y D+ + Sbjct: 508 AAKLLPWEQLVRKAELPNKLPNEHPTSEIDSIQYAQLAQEVYDFILDRLRGYYADKGVPA 567 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE 613 A+ + +L + I + F + + + + KRI IL E I + Sbjct: 568 THFNAVAELKLASLYDVDRRIDAIGTFAALPEADALAAANKRIRNILRKAEDA---IPAQ 624 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVD 673 + L AE+ L + ++ + Y + ++L + ++ FFD V+VN + Sbjct: 625 VDAALLREPAERALAEAVEAAIVETDGTLRQRDYVSVLNVLARLRPQVDAFFDGVMVNAE 684 Query: 674 DREVRDNRLSLLQYIKNIILIVINVQKI 701 +R NRL+LL+ + + V ++ + Sbjct: 685 APALRGNRLALLKRLGERLGSVAAIEHL 712 >gi|166367631|ref|YP_001659904.1| glycyl-tRNA synthetase subunit beta [Microcystis aeruginosa NIES-843] gi|166090004|dbj|BAG04712.1| glycyl-tRNA synthetase beta chain [Microcystis aeruginosa NIES-843] Length = 710 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 188/714 (26%), Positives = 306/714 (42%), Gaps = 71/714 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+PA A + L+ E + ++ Y TP RL + + GL Sbjct: 2 DFLLEVGTEELPADFVDSAIAQWRERVSKSLETESLDATAIQVYATPRRLAVLITGLPTE 61 Query: 63 SPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP V A A +GF R G+ T + D KG+ P Sbjct: 62 QEARSEEIKGPPVSAAYKNGQITPAGEGFARKQGVSTAAFSIRATD--KGEFVYIEKTIP 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++P I ++ + MRW + RP++ +L ++ E ++I Sbjct: 120 GRPTAEILTELIPQWITRLEGRRFMRWGDGD-----LRFPRPIRWLLTLVDGEVLPLELI 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + +T+GHR P + + Y+ L V DP+ R+ I LA Sbjct: 175 NGS-TTLTSDRLTFGHRILHPQSLAISHPQAYLTSLRSIFVEADPQVRQQIITAQITTLA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DLL E+ LVE+ +G FD ++L LP E+I + T+Q+ F +T + Sbjct: 234 KKLKGVAEIPADLLAEVTNLVEYPTAIVGKFDDEFLELPPEVIITVMVTHQRYFPVKTPQ 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+ FI +SN I GN RV+ ARL DA F+ D + Sbjct: 294 G-LSPYFITISNGDPQ-KSEIISAGNERVIRARLADARFFYTADCD-------------- 337 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDR 413 +PLD + +L+ V F ++GT ++V RI + + I + ++ D ++ Sbjct: 338 ------EPLDSFLPQLET--VTFQEELGTMRDKVDRIMEIAQMIVEQLNLDEQSRSDIES 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L KADL T++V EFPELQG + ++YA++ E+ I EH PR + +P Sbjct: 390 TAMLCKADLVTQMVYEFPELQGVMAEKYALISGESAVVARGIFEHYLPRNAGDILPETIT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 V +AD+LDTL+ + + P+GS DP+ALRRA II II +I L IE Sbjct: 450 GQVVGIADRLDTLVGIFGLGMLPTGSSDPFALRRAANAIISIIWSANFNINLLALIEQIA 509 Query: 534 L----------------ILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLL 568 FF RL+ L D I +DL+ A+L + +NLL Sbjct: 510 KDFVTCHPDKPNPANLIKDFFLQRLQTLLIDDLRIDYDLVNAVLGENDPEYKSRALENLL 569 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKR 626 + + L + + + R ++ + + + I+ + +E Sbjct: 570 DTRERARFLCQIRQDGQLANIYETVNRSTRLAQKGDLDTTTLEAKGIINTELFEQSSEPA 629 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 Y + + + + Y ++ L +I + FFD VLV + V Sbjct: 630 FYDALIALIPETISAREQRDYQRLVTALTAISPLVADFFDGENSVLVMAEKESV 683 >gi|281491595|ref|YP_003353575.1| glycyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. lactis KF147] gi|281375313|gb|ADA64826.1| Glycyl-tRNA synthetase, beta chain [Lactococcus lactis subsp. lactis KF147] Length = 673 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 215/717 (29%), Positives = 348/717 (48%), Gaps = 63/717 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIPA + + L+ + LKE + + + ++ TP RL + ++GL+ Sbjct: 1 MTNYLLEIGLEEIPAHLVTPSINQLAERMETFLKENRLEFDKIIKFSTPRRLAIIVEGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE GP G KAI GF R G KGD Y A Sbjct: 61 EASEAIDEEVKGPSAKIAKDAQGNWSKAIQGFSRGQGATPDDLIL------KGDYYYAKK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++L + I K+ + M+W F ++RP++ I+ +L ++ Sbjct: 115 HIDGVKAEEILSKVGDEVIAKMTFSTYMKWGNND-----FLFVRPIQWIVSLL-----ED 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++ DL ++ + GHRF A +++++ + Y + E VL+D E R+ I Sbjct: 165 KVVAFDLLDVTANRFSRGHRFLANVEVELKNANDYASKMPENFVLVDAEHRKAEISAQIL 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LAS ++ KDLLEE+ +VE+ F+GSFD KYL +P E++ +++ NQ+ F Sbjct: 225 ALASENKWQVTLHKDLLEEVNNIVEYPTAFVGSFDPKYLSVPAEVLVTSMRDNQRYFEVY 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG LA FI V N A + +V GN +V+ ARLEDA FWK DQ Sbjct: 285 NQEGQLAPNFISVRNGNAEN-IENVVLGNEKVLVARLEDAEFFWKEDQKL---------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK---IAQLIDADVAL 410 ++ +A+L V FHAKIG+ E ++R + + K IA L D + Sbjct: 334 ----------KIEDLVAKL--AKVTFHAKIGSITEHMARTKEIAAKLADIAGLTDEEKRD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V R+ + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 382 VARSAEIYKFDLLTGMVGEFDELQGVMGEKYALLAGENANVSAAIREHYMPTSAEGELPE 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS---- 526 K+ ++ ADK+D++++F+ + PSGS DPYALRRA G+IRII + LS Sbjct: 442 TKVGSVLAAADKIDSVLSFFNVGLIPSGSNDPYALRRAVQGLIRIIEKMNWHFDLSLFID 501 Query: 527 --QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 + ++ F R++ L ++ RHD++EA + N ++ +++ ++ Sbjct: 502 QFEGENHLEILDFVKARIQKLLLEKLDRHDIVEAAINSSNFDITNMMESAFVIDGHKLHE 561 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + + + R ++ + EI+P +AE+ LY V+ Sbjct: 562 PFKPAIENVSRSINLVKKAKDIK-----EINPILFEEDAEEALYNVVISLQNQWTYMPGE 616 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +++ I HS+ IE FF+ V+V +D VRDNR++LL + + ++ + I Sbjct: 617 EKFRAIV---HSLAPAIETFFESVMVMAEDLSVRDNRIALLSEVVALTSVMADFSLI 670 >gi|188591265|ref|YP_001795865.1| glycyl-tRNA synthetase subunit beta [Cupriavidus taiwanensis LMG 19424] gi|170938159|emb|CAP63145.1| glycine tRNA synthetase, beta subunit [Cupriavidus taiwanensis LMG 19424] Length = 707 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 204/738 (27%), Positives = 357/738 (48%), Gaps = 72/738 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLK 57 M D L+E+++EE+P + + + + L L E ++ + + TP RL + Sbjct: 5 MTDSLLIELFTEELPPKALARLGDAFAQGLFAGLGERDLLEPGATVTPFATPRRLAALVS 64 Query: 58 GLSPHSPEKIE-ERLGP------RVGAGK----KAIDGFLRSTGLQTIS-DCQIKKDPKK 105 G+ ++P++ + E++ P G K + RS G+ I + K Sbjct: 65 GVRRNAPDREQREKVLPLSVALDANGEPTAPLAKKLAALARSVGVAEIDWQALERGSDGK 124 Query: 106 GDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCI 165 + + + L+ + + K+P PK M + S ++RP S++ + Sbjct: 125 AEAFFYRYTARGAELAAGLQATLEDTVAKLPIPKVMSYQRPDG--STVHFVRPAHSLIAL 182 Query: 166 LVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAM-VLLDPECR 224 +E I+ + L + N+T GHRF + I+++ + Y + LE A V+ R Sbjct: 183 FGSE-----ILPVTLLGLQASNLTQGHRFLSHGAIEIRHANDYAQQLESAGRVVASYAER 237 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 R + + + A A +++ + LL+E+ LVEW V+ F++ +L +P+E + LT++ Sbjct: 238 RERMRSALLQEAGAD--QVIMPEALLDEVNSLVEWPVVYACHFEEAFLAVPQECLILTMQ 295 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 TNQK F +G L N F++VSN+ A++ +I+ GN RVV RL DA F+ +D+ Sbjct: 296 TNQKYFALTDADGHLRNRFLIVSNL-ATETPQSIISGNERVVRPRLADAKFFFDQDRK-- 352 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K L R+ +L VV+H KIGTQ +RV R++ + +A + Sbjct: 353 ------------------KTLASRVPQL--ASVVYHNKIGTQLDRVQRLQQIAGHVADAL 392 Query: 405 DA-----DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 +A D A R L+KADL T++V EFPELQG +G YA +E A EH Sbjct: 393 NAAGVATDKAAAMRGAELAKADLLTDMVGEFPELQGTMGTYYARHDDEAEDVALACSEHY 452 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PR + +P +S V+LADKL+TL+ W I +P+G KDP+ALRR LGI+R+++E Sbjct: 453 RPRFAGDALPAGAVSTAVALADKLETLVGIWGIGLQPTGEKDPFALRRHALGILRMLIEK 512 Query: 520 KIDIPLSQF---------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + + L+ + ++ F +DR++ YL D+ + +EA++ Sbjct: 513 PLALSLASLLAQTQQAFAGIAAVKPAPEAILDFLYDRVRGYLKDKGYTTNEVEAVVSLRP 572 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 D L I+ ++ + F + + E + KRI IL +KN E ++P +AE Sbjct: 573 DQLHDILGRMEAVRTFAALPEAEALAAANKRITNIL----RKNTEPVGAVNPALFREDAE 628 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+A I ++ + + L + + ++ FF+ V+V +D ++R NRL+L Sbjct: 629 GALHAAIERVRPAVEAAFASGDFTTALRDLAQLRDAVDQFFNDVMVMAEDAQLRANRLAL 688 Query: 685 LQYIKNIILIVINVQKIV 702 L + + V ++ K+ Sbjct: 689 LASLHALANRVADISKLA 706 >gi|91975701|ref|YP_568360.1| glycyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisB5] gi|91682157|gb|ABE38459.1| Glycine--tRNA ligase [Rhodopseudomonas palustris BisB5] Length = 822 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 257/529 (48%), Positives = 339/529 (64%), Gaps = 23/529 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTEKLVAEGLVYEGAKAFATPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP+VGA A+ GFL++TGL ++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKVGAPDAAVQGFLKATGLASLDEAKIQRDPKKGDFYIALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+PV ++ PWPKSMRW + A W+RPL SI+ + + +++ D+ Sbjct: 121 IDVLADILPVIVRTFPWPKSMRWGERSAKPGALQWVRPLHSIVATFGIDTEEPEVVAFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP I V+ + Y L A V+LDP+ R++ IL DA LA A Sbjct: 181 SGIKAGQVTRGHRFMAPDEISVRRFEDYEAKLYAAKVVLDPQRRKDIILADAKTLAQAQN 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGVL 299 ELVED+ LL+E+ GLVEW MGSFD +L +P E+IR TI+ NQKCFV L Sbjct: 241 YELVEDQGLLDEVSGLVEWPVALMGSFDADFLSIPGEVIRATIRANQKCFVVADPATAKL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 AN FIL SNI+ASDGGAAI GN RV+ ARL DA F+ D Sbjct: 301 ANKFILTSNIEASDGGAAITAGNERVIRARLSDAKFFYDTD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ + D +VFH K+GTQ ER++RI L +IA L+ ADV RA L K Sbjct: 342 -LKTKLEDRLPKFD--QIVFHEKLGTQAERIARIERLAAEIAPLVGADVEKARRAARLCK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL TE+V EFPELQG +GK YA+ E+ S A E+H KP+GP + VPT+ +SI V+L Sbjct: 399 ADLLTEVVGEFPELQGLMGKYYALAAGEDASVAAACEDHYKPQGPNDRVPTDPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 ADKLDTL+ FWAI+EKP+GSKDPYALRRA LG+IRII+ N + + L F Sbjct: 459 ADKLDTLVGFWAIDEKPTGSKDPYALRRAALGVIRIIVTNNLKVRLEPF 507 Score = 195 bits (496), Expect = 2e-47, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 2/172 (1%) Query: 532 QNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +L+ F DRLK+ L D+ RHDL++A+ D++L IV ++ L F ++ G+ L Sbjct: 649 SDLLKFLVDRLKVQLRDQGARHDLVDAVFALEGQDDILMIVRRVEALAAFLATDDGKNLL 708 Query: 591 LSAKRIFQILAIEEKKNREISLEI-SPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 KR IL IEEKK+ + + EK L A I E++ + + Sbjct: 709 AGTKRAANILRIEEKKDGRAFDGVPDASLYAQDEEKALAAAIDRARAEATEAVAREDFAA 768 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ FFD+V VN DD+ VR+NRL LL I+ V + KI Sbjct: 769 AMTAMAGLRPAVDAFFDKVTVNADDKAVRENRLKLLGEIRAATRAVADFSKI 820 >gi|37521215|ref|NP_924592.1| glycyl-tRNA synthetase subunit beta [Gloeobacter violaceus PCC 7421] gi|35212211|dbj|BAC89587.1| glycyl-tRNA synthetase beta chain [Gloeobacter violaceus PCC 7421] Length = 724 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 202/742 (27%), Positives = 322/742 (43%), Gaps = 76/742 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L + L E + + ++ + TP RL + +GL Sbjct: 1 MATFLLEIGTEELPASFVPGALAQLEARVRSALAEAQITAETLKLFGTPRRLAVLAEGLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P++ EE GP G +GF R G+ + +KG+V AV Sbjct: 61 ERQPDREEELKGPPARVAFDAGGRPTAQAEGFARKAGVAVGELS--VRATEKGEVVFAVR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R R + +L +P I + P+ MRW+ + RP++ ++ + Sbjct: 119 RIEGRPVTQLLAEQIPEWITGLEGPRLMRWADGD-----LRFSRPIRWLVAL-----VDS 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ +++ + G + GHR P PI++ + Y L A VL DPE RR I Sbjct: 169 EVLPVEMAGVSAGRTSRGHRVLHPEPIELATAADYPAALTAAFVLADPEVRRERIRTGIA 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A +G E LLEE+ LVEW G F+ ++L LP +I+ + T+Q+ F Sbjct: 229 AVAEQLGAEAAVPAALLEEVNFLVEWPTAVAGQFESEFLSLPAPVIKTEMITHQRYFPLH 288 Query: 294 TREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 L FI VSN I +GN RV+ ARL D F++ D+ Sbjct: 289 QPGDPEALIPRFITVSNGDPR-YSELIARGNGRVIRARLADGRFFFEEDRK--------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 +PL++ + +L V F +G+ ERV R+ + + + Sbjct: 339 -----------QPLEKFLGKLQ--SVTFQESLGSVAERVERLEAIALWLCGHLGLGGEQT 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 LV R L KADL T++V EFPELQG +G++YA L E C I EH +PR +++ Sbjct: 386 RLVARTAHLCKADLATQMVYEFPELQGLVGRDYARLDGEEPLVCAGIAEHYQPRNVEDDL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + V +AD+L+TL+ + + PSGS DP+ALRRA L ++RI + ++ L + Sbjct: 446 PASLTGQVVGIADRLETLVGIFGLGMLPSGSSDPFALRRAALTVVRIGWDTDFELDLVEA 505 Query: 529 IED-------------------QNLILFFHDRLKLYLHDR-DIRHDLIEAIL-------- 560 + + L +F RL L +R + +DL+ A+L Sbjct: 506 LGFTVELFVSRQLLKQPADTLLEQLCDWFAQRLYGLLVERDGLDYDLVLAVLGAVDTGYT 565 Query: 561 RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLL 620 R NL + + L S + +A R+ ++ + + Q + Sbjct: 566 RRALANLRALKLRLDTLVAARKSGLLAQIYETAVRVARLAGKAGIGDLTL-EHFDAQLVA 624 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 AE L + F + + + Y + L + + FFD V+V V D +R N Sbjct: 625 DPAEAALREAVQKFAATAEAAEAQEDYPALLGALGELAPQVSCFFDAVMVMVPDETLRTN 684 Query: 681 RLSLLQYIKNIILIVINVQKIV 702 RL LL I N +V ++V Sbjct: 685 RLRLLAVIDNNARRCFDVTQVV 706 >gi|254423532|ref|ZP_05037250.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7335] gi|196191021|gb|EDX85985.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7335] Length = 715 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 197/725 (27%), Positives = 318/725 (43%), Gaps = 81/725 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLE+ +EE+PA +A + L ++ + + Y TP RL + + L Sbjct: 1 MATFLLEVGTEELPASFVSEAIAQWKSKIPTDLSQQFIESGQIEFYATPRRLAVLIHELP 60 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P + EE GP A KA GF S G+ ++ KG+ Sbjct: 61 ERQPTREEEAKGPPAKAAYKGGKPTKAATGFAASKGVSVDQLE--VRNTDKGEFVFVRQT 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R ++L+ +VP + + + MRW + RP++S++ +L + Sbjct: 119 IPGRQTAELLQAMVPEWVLGLEGSRFMRWGDGD-----LRFPRPIRSLVTLL-----DTQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + L+ T GHR P + + + Y+ L+ A V +DP R+ IL+ Sbjct: 169 LIPVSLENGSEVCQSDRTTTGHRVLHPEKVSLDNAQDYVSALKSAYVTVDPLERKTIILD 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +AS+V V ++DLL E++ LVEW +G FD+++L LP ++ ++++Q+ F Sbjct: 229 QVAEVASSVDGHAVINEDLLAEVVDLVEWPTAIIGKFDEEFLALPSKVTITEMESHQRYF 288 Query: 291 VTR--TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 R T L FI VSN + A I QGN RV+ ARL D F+ DQ Sbjct: 289 PVRPSTDTDQLLPYFITVSNGDPA-KSALITQGNERVIRARLADGKFFFDADQK------ 341 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--- 405 +P + +L+ V F A++G+ E+VSRI + ++ + Sbjct: 342 --------------QPFADYLPQLET--VTFEAQLGSVREKVSRIEKVTSLLSDQLGLSP 385 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 RA L KADL T++V EFPELQG IG++YA E + DAI EH PRG Sbjct: 386 KQKQQAIRAAQLCKADLVTQMVGEFPELQGYIGQKYAANSGEPAAVADAIYEHYLPRGAG 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +++P I V +AD+LDTL++ ++I + P GS DP+ALRRA +I I+ + + + L Sbjct: 446 DSLPQTLIGQVVGIADRLDTLVSIFSIGKLPKGSSDPFALRRAANAVITIVWDADLPLKL 505 Query: 526 SQFIE------------------DQNLILFFHDRLKLYLHDR-DIRHDLIEAILRPEND- 565 + LI FF R++ L D +I +DL+ AI + Sbjct: 506 YPVLTQVVEDFAASREGVDPDALMALLIDFFDQRIRTLLQDNLEIDYDLVNAIFGQDKHY 565 Query: 566 ------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQ 617 +LL + D L + A+ + R ++ E + E + P Sbjct: 566 QLRSLTDLLDVRDRATFLQSIRNDARLAVLYETVNRAAKLAVKGELDTDILDPEGIVDPT 625 Query: 618 YLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDD 674 +E+ Y + Q + + Y ++ L + FFD V+V ++ Sbjct: 626 LFEQPSEQAFYDSLQTLLPQTQAAQAERDYSKLITGLEQAAPTVANFFDGDTSVMVMAEE 685 Query: 675 REVRD 679 VR Sbjct: 686 TAVRQ 690 >gi|159026323|emb|CAO88900.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 710 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 189/714 (26%), Positives = 310/714 (43%), Gaps = 71/714 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFLLE+ +EE+PA A L + L+ E + ++ Y TP RL + + GL Sbjct: 2 DFLLEVGTEELPADFVDSAIAQLQERVSKSLETESLDATAIQVYATPRRLAVLITGLPRE 61 Query: 63 SPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + EE GP V A A +GF R G+ T + D KG+ P Sbjct: 62 QEARSEEIKGPPVSAAYKNGQITAAGEGFARKQGVSTDAFSIRATD--KGEFVYIEKTIP 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++P I ++ + MRW + RP++ +L ++ E ++I Sbjct: 120 GRQTAEILTELIPQWITRLEGRRFMRWGDGD-----LRFPRPIRWLLTLVDGEVLPLELI 174 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + +T+GHR P + + Y+ L V DP+ R+ I + LA Sbjct: 175 NGS-TTLTSDRLTFGHRILHPQSLAISHPQAYLTSLRSIFVEADPQVRQQIITDQITTLA 233 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DLL E+ LVE+ +G FD ++L LP E+I + T+Q+ F +T++ Sbjct: 234 KKLQGVAEIPADLLAEVTNLVEYPTAIVGKFDDEFLELPPEVIITVMVTHQRYFPVKTKQ 293 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+ FI +SN I GN RV+ ARL DA F+ D + Sbjct: 294 G-LSPYFITISNGDPQ-KSEIISAGNERVIRARLADARFFYTADCD-------------- 337 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDR 413 +PLD + +L+ V F ++GT ++V RI + + I + ++ D ++ Sbjct: 338 ------EPLDSFLPQLET--VTFQEELGTMRDKVDRIMEIAQMIVEQLNLDEQSRSDIES 389 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 +L KADL T++V EFPELQG + ++YA++ E+ I EH PR + +P Sbjct: 390 TAMLCKADLVTQMVYEFPELQGVMAEKYALISGESAVVARGIFEHYLPRNAGDLLPETIT 449 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 V +AD+LDTL+ + + P+GS DP+ALRRA II II +I L IE Sbjct: 450 GQVVGIADRLDTLVGIFGLGILPTGSSDPFALRRAANAIISIIWSADFNINLLALIEQIA 509 Query: 534 L----------------ILFFHDRLKLYLHDR-DIRHDLIEAILRPEN--------DNLL 568 FF RL+ L D I +DL+ A+L + +NLL Sbjct: 510 QDFVTSHPDKPNPANLIKDFFLQRLQTLLIDDLRIDYDLVNAVLGENDPEYKSRALENLL 569 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE--ISPQYLLLEAEKR 626 + + L + + + R ++ + + ++ I +E+ Sbjct: 570 DTRERARFLCQIRQDGQLANIYETVNRSTRLAQKGDLDTTTLEMKGIIDRDLFEQSSEQA 629 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLVNVDDREV 677 Y ++ + + + Y ++ L +I + FFD VLV + V Sbjct: 630 FYDALNALIPETISAREQRDYQRLVTALTAISPVVADFFDGENSVLVMAEKESV 683 >gi|332970432|gb|EGK09424.1| glycyl-tRNA synthetase beta subunit [Kingella kingae ATCC 23330] Length = 683 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 204/684 (29%), Positives = 335/684 (48%), Gaps = 58/684 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + ++ L + +I Y +P RL + + + ++ + Sbjct: 16 PPKALNNLGNHFAQSIVEGLGKAQLIDGETQFTPYASPRRLAVQVANVKAVQADQHVVKK 75 Query: 72 GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVA 131 GP V A +KAI GF RS G++ S I + K D+Y + + + D+L IV A Sbjct: 76 GPAVSANEKAIAGFARSCGVEVGSLKVI--NDGKQDIYAHEFTQTGQTLADLLGEIVNAA 133 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 ++K+P PK MRW + S +++RP+ ++ + A+ ++ +++ + N T G Sbjct: 134 VKKLPIPKVMRWGS-----STHTFVRPVHGLVAMHGAD-----VLPVNVLGLASRNFTLG 183 Query: 192 HRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 HRF + I D Y + L E+ V+ + R+NAI + A ++ + D+ LL Sbjct: 184 HRFLSQGEIVFAQADDYAKQLAEQGKVIANFAERKNAIQAALNEQAGSLKATVAADESLL 243 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ LVE+ V F+ +L +P+E + LT++ NQK F +G L N F+LVSN+Q Sbjct: 244 DEVTALVEYPVVLQAGFEAHFLAVPQECLILTMQQNQKYFPLLDAQGKLMNRFLLVSNLQ 303 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 A+D + I+ GN RV+ ARL DA F+K+DQ L+ R+ Sbjct: 304 AADP-SHIIHGNERVLRARLSDAEFFYKQDQK--------------------ATLESRLP 342 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 +L VV+H KIG+Q ERV R++ + IA + AD A +RA L+KADL TE+V EF Sbjct: 343 KL--ASVVYHNKIGSQAERVERLQTIAAHIASALGADKAAAERAARLAKADLVTEMVGEF 400 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +GK YA L E AIE+H +PR + +P N I V+LADKL+TL+ W Sbjct: 401 PELQGTMGKYYAQLDGEQPEIALAIEQHYQPRFAGDALPENAIGTAVALADKLETLVGIW 460 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIP---------------LSQFIEDQNLI 535 I P+G KDPYALRRA LG++R+++ + I + + Sbjct: 461 GIGLIPTGDKDPYALRRAALGVLRMLMNYPLSINDLLNTVADQFPANVLADKAKTVAEIA 520 Query: 536 LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 F RL + L + D D++ A+L D L + ++ + +F + + KR Sbjct: 521 DFMQARLAVLLQN-DYSQDVVAAVLAQRPDRLNDLAAKLQAVEQFKQLPESAALAAANKR 579 Query: 596 IFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLH 655 + +L + + + ++ + EK L+A D + ++ + L Sbjct: 580 VQNLLKKADAQLGD----VNASLFAQDEEKALFAAAQDLQPKVADAAKRGDFQAALTELA 635 Query: 656 SICEPIEIFFDQVLVNVDDREVRD 679 +I ++ FFD V+V +D V+ Sbjct: 636 AIKPQVDAFFDGVMVMAEDAAVKQ 659 >gi|237743228|ref|ZP_04573709.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 7_1] gi|229433524|gb|EEO43736.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 7_1] Length = 686 Score = 661 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 199/728 (27%), Positives = 351/728 (48%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A DL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALADLKTNFERKLKNNRIKFDGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGALTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSDKN-----IRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR I + Sbjct: 170 DFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINNSL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 229 LEDE-KADVDEALLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L + DN+ T +++ Sbjct: 504 LDTLEADKVLKADRAKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+ I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQAVKRVANIMKGNK------DITIKEKLFKTDIEKTLYTDSKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 G I++S+ K Y + L ++ I+ +FD V+V +D+ VRDNR++ L YI N+ Sbjct: 618 VGEEIEKSIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRINQLTYIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|297621503|ref|YP_003709640.1| glycyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297376804|gb|ADI38634.1| glycyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 1010 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 202/739 (27%), Positives = 356/739 (48%), Gaps = 79/739 (10%) Query: 1 MPD-----FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLY 55 MP+ FLLEI SEE+PA +L +I LL +E + Y+ + Y TP RL + Sbjct: 311 MPEGTKDHFLLEIGSEELPAAFVPIGLRNLESAIIELLNKENLSYEKLNVYGTPRRLSVV 370 Query: 56 LKGLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTIS------DCQIKKD 102 ++ L E +EER GP + G K A GFL+S G + + D +I+ Sbjct: 371 VENLQLTISEAVEERRGPPLDRAFNEDGTLKPAGAGFLKSIGKELLDRTAIENDEEIEIR 430 Query: 103 PKKGDVY-LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKS 161 KG Y A ++ P + +L +P I + +PK M+W S+ RPL+ Sbjct: 431 EVKGSAYLFAKVKTPGKSAARILADSLPSIILNLEFPKKMKWGDLE-----ISYARPLQW 485 Query: 162 ILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDP 221 I+ ++ E ++ + ++ GN + GHR P P ++ + Y+ L E +L DP Sbjct: 486 IVAMIGTE-----VVPFIVGDLISGNASRGHRQLDPDPFEILNPQSYLETLREHRILADP 540 Query: 222 ECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRL 281 R+ I+ + L + +GL ++E ++ +++ LVEW V G+FD+ +L +P+E++ Sbjct: 541 AERKQEIIKQLNTLENQLGLHVIERDAVIPQVLNLVEWPMVAKGNFDENFLKIPQEVLIS 600 Query: 282 TIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 + +QK F G L F++ N + +++GN +V++ARL D + +++D Sbjct: 601 EMVEHQKYFPVADENGKLKPQFVITCNTLPT---ENMIRGNQKVLSARLSDGVFLYEKD- 656 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA 401 L P + +L V + + +G+ E+V R+ + + Sbjct: 657 -------------------LGVPFESFNEKLKA--VTYLSGLGSIYEKVLRLEGHVEVLQ 695 Query: 402 QLID-ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + + + + V RA L K DL +++V EFPELQG IG+ YA+ E AIEEH Sbjct: 696 EHLQISSLKNVHRAARLCKCDLVSDMVFEFPELQGTIGRYYALAHGEKPEVAQAIEEHWM 755 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P+G +PT++ + LA+K+D L++ ++ KP+ SKDPYALRR L IIR+++ K Sbjct: 756 PKGENAPLPTSETGSVLCLAEKIDNLLSCFSAGLKPTSSKDPYALRRQVLSIIRLVIAKK 815 Query: 521 IDIPLSQFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 +PL ++ + ++ FF +R+K + D +EA + Sbjct: 816 FRLPLKNILDKCTRNFDPMHLSSKDQVIKEVMDFFTNRIKSIFQEYGFTKDEVEASIACG 875 Query: 564 NDNLLTIVDLIKHLNEFF-SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 D++ ++ L+EF SS + K KR LA ++ LL + Sbjct: 876 FDDIYDTFCRVQALHEFRASSEEFPKLYEVYKRAKGQLA------NHSAVAFDKGLLLKD 929 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AEK L + +E++ H+ Y Q L+ + + F++V + +D ++++NR+ Sbjct: 930 AEKELDKTLDSTKEKFEEALSHQHYAQAYQLIAQMQPSLARLFNEVRILDEDEKIKENRI 989 Query: 683 SLLQYIKNIILIVINVQKI 701 +LLQ + ++ +++ KI Sbjct: 990 ALLQRVFSLFEQLLDFSKI 1008 >gi|56751488|ref|YP_172189.1| glycyl-tRNA synthetase subunit beta [Synechococcus elongatus PCC 6301] gi|56686447|dbj|BAD79669.1| glycyl-tRNA synthetase beta chain [Synechococcus elongatus PCC 6301] Length = 728 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 194/760 (25%), Positives = 338/760 (44%), Gaps = 93/760 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A L L E + + Y TP RL + ++GL Sbjct: 1 MPAFLLEVGTEELPASFVAAAIAQWQNWLPTRLAEAQLTTTQISVYGTPRRLAVLIEGLP 60 Query: 61 PHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ EE GP A A GF R G++ ++ KG R Sbjct: 61 DRQPDREEEVKGPPASAAFKDGEPTPAAIGFARKQGVEVSD--FTVRETDKGAFVFVQKR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + + + DVL+++VP Q + + MRW + RP++ ++ + ++ Sbjct: 119 EVGQPLADVLQSLVPSWTQDLEGKRFMRWGDGD-----LRFSRPIRWLVAL-----IDDQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+L + ++ GHR P P+ + Y+ LE A VL+DP R+ I Sbjct: 169 VLPLELTSGGSTVQSDRLSRGHRVLHPEPVAIAQASDYLATLEAASVLVDPAQRQAKIEA 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +AS VG + +DLL E++ L EW +G F++++L LP E+ + + ++Q+ F Sbjct: 229 QTAAIASKVGGQAELPEDLLAEVVHLTEWPTAVLGQFEERFLSLPAEVSTMVMTSHQRYF 288 Query: 291 VTR-----------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 L CF+ +SN + I GN+RV+ ARL D +F++ Sbjct: 289 PIYQATAQRDPAAIDARSELLPCFVTISNGDPA-ASETIAAGNARVIRARLADGEYFYRT 347 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D +PL+ +++L+ V F ++G+ +V RI + + Sbjct: 348 DSK--------------------QPLESFLSQLEA--VTFQEQLGSVRSKVDRIGAIAHR 385 Query: 400 IAQLID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + + +D LV RA L KADL +++V EFPELQG +G++YA + E + AI Sbjct: 386 LCDQLSIHSSDRLLVSRAAQLCKADLVSQMVYEFPELQGVMGEKYARVSQEPDAVATAIR 445 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH P+G + +P V+LAD+LDTL+ + + PSGS DP+ALRRA G++ I+ Sbjct: 446 EHYLPKGAGDQLPQTLTGRMVALADRLDTLVCIFGLGLLPSGSSDPFALRRAANGVLNIL 505 Query: 517 LENKIDIPLSQFIE--------------------DQNLILFFHDRLKLYLHD-RDIRHDL 555 + ++ + L+ I+ Q L FF RL+ L D + I +DL Sbjct: 506 WDGQLRLDLTALIQGIAADFHHAFPKLAGNAETLIQQLTDFFGQRLRTLLQDEQGIDYDL 565 Query: 556 IEAILRPEN--------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EK 605 + A+L + + L ++ K L + + R ++ + + Sbjct: 566 VNAVLGDGDANYLLRAIADPLDALNRAKLLQTLRQDGRLVALYETVNRATRLASKGDLDT 625 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 + + ++ +E + ++ + + Y + + L + ++ FF Sbjct: 626 ATLDPTGLVNADLFQQPSEAAFLSALTTLQPLATAAQASQAYEPLVEGLLTAAPAVQSFF 685 Query: 666 D---QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D VLV D ++ NRL+LL ++N ++ + IV Sbjct: 686 DGDTSVLVMDPDPAIQQNRLNLLGLLRNQARVLADFGAIV 725 >gi|227431616|ref|ZP_03913652.1| glycine--tRNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352608|gb|EEJ42798.1| glycine--tRNA ligase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 685 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 204/730 (27%), Positives = 338/730 (46%), Gaps = 75/730 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + + Y TP RL + L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTSSENQLIERTRNFLAEHRLTVGAINPYSTPRRLAVELTDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G + + G V+L Sbjct: 61 EESESLSEEKRGPSIERAKDANGEWTKAATGFARGQGATPDD-----FETRDGYVWLTK- 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +D+L I + ++ + M+W+ AF ++RP++ ++ + + Sbjct: 115 HTEGVPAKDILVKIGAEVVSEMKFSTYMKWANN-----AFLYVRPIRWLVALF-----DK 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++D + ++ G +T GHRF + +++ S D Y+ LE A V+++ E R+NAI + Sbjct: 165 EVVDFHVLDVQTGRVTRGHRFLSNEHVEISSADDYVSTLESASVVVNAEVRKNAIRSQLT 224 Query: 234 RLASAVGLELVEDKD----LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A L D D LLEE+ +VE F G+FDKKYL +P+E++ +++ +Q+ Sbjct: 225 AIAKQNNWSLELDTDAAQNLLEEVNNIVELPTAFAGTFDKKYLEIPDEVLITSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F +G L F+ V N + ++ GN +V+ ARLEDA F+K DQ Sbjct: 285 FFVTNHDGKLLPHFLSVRNGN-QEHLDNVIAGNEKVLVARLEDAEFFYKEDQ-------- 335 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 +K + M ++ L VFH KIGT E + R VL + +AQ ++ D Sbjct: 336 ------------TKTIADYMEKVKKL--VFHEKIGTVYEHMQRTGVLAQALAQSLNFDEQ 381 Query: 410 L---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V RA + K DL T +V EF ELQG +G+ YA L EN + AI+EH P Sbjct: 382 QLSNVSRAAEIYKFDLMTGMVGEFDELQGIMGEHYAKLFGENPAVAAAIKEHYMPTSATG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 + + I +++ADKLD ++ F+A + PSGS DPY LRRA GI+R + E I L Sbjct: 442 KIAESDIGAVLAVADKLDAIVTFFAADLTPSGSNDPYGLRRAATGIVRTLQEKNWHIALK 501 Query: 527 QFIED-------------QNLILFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVD 572 + ++ F DR++ D +R DL+ A + R N +++ ++D Sbjct: 502 PVLTQFAQSQGEVAAADITAVLEFILDRVRKLTLDDGVRQDLVSAGVSRSGNTDVVYLID 561 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 I L + S R+ ++ + + + P +AEK LY Sbjct: 562 RINVLAAHSKDNDFRDVIESLTRVDRLAVKQLTND-----SVDPSLFENDAEKELYQATY 616 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 ++ + ++ L + PI +F+ +VN ++ V++NR + L I +I Sbjct: 617 AL--NLSHLVKEGA-DEVYTTLAGLQSPISTYFEATMVNTENAAVKNNRYAQLNVIHRLI 673 Query: 693 LIVINVQKIV 702 + ++++IV Sbjct: 674 SELGDLEQIV 683 >gi|241767222|ref|ZP_04764968.1| glycyl-tRNA synthetase, beta subunit [Acidovorax delafieldii 2AN] gi|241362135|gb|EER58230.1| glycyl-tRNA synthetase, beta subunit [Acidovorax delafieldii 2AN] Length = 709 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 201/738 (27%), Positives = 345/738 (46%), Gaps = 71/738 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L LK +G+ + + +P RL ++ ++ Sbjct: 5 NLLVELFVEELPPKALQKLGDAFATVLADQLKAQGLATAASAVTPFASPRRLAAHVTAVA 64 Query: 61 PHSPEKI-EERLGP------RVGAGKKAIDGFLRSTG------LQTISDCQIKKDPKKGD 107 + +K +++L P G A+ L++ G + ++ + +D K + Sbjct: 65 DKAADKAVQQKLMPVTVGLDASGNATPALLKKLQALGADVSNPVAAVAALKRAQD-GKAE 123 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSIL 163 ++ L+ + AI K+P PK M + ++ ++RP ++ Sbjct: 124 TLFYDSVVAGATLQAGLQKALDEAIAKLPIPKVMSYQLETDCELPGWTSVHFVRPAHGLV 183 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDP 221 + ++ + + GN T GHRF A P+ ++ D Y L+ + V+ Sbjct: 184 AL-----HGSTVVPVKALGLTAGNHTQGHRFEAAVSPVVLRDADSYAATLKTDGAVVASF 238 Query: 222 ECRRNAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELI 279 R+ I A+ VG +ED+ LL+E+ LVE V + F++++L +P+E + Sbjct: 239 AERKAEIARQLAAAAAQVGNGARPIEDEALLDEVTALVERPNVLICQFEEQFLDVPQECL 298 Query: 280 RLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 LT+K NQK F G L N F++VSNI D + + GN RVV RL DA F+ + Sbjct: 299 ILTMKANQKYFPLLDAAGKLTNKFLVVSNISPED-TSFVTGGNERVVRPRLADAKFFFDQ 357 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ K L R+ L VV+H K+GTQGERV R+R + K Sbjct: 358 DRK--------------------KTLASRVEGLS--KVVYHNKLGTQGERVERVRAIAKA 395 Query: 400 IAQLIDADVALVDRAIVLS--KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 IA + + D + K DL T++V EFPELQG +G+ YA+ + DAIE+ Sbjct: 396 IAAQLGDAALVADADLAAQLAKTDLVTDMVGEFPELQGTMGRYYALNDGLGETVADAIED 455 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H KPR + +P N + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++ Sbjct: 456 HYKPRFAGDTLPRNTAGVVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLV 515 Query: 518 ENKIDIPLSQFIEDQ-------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 E + + LS + L F +DRL L ++ ++A+L Sbjct: 516 EKDLPLDLSVLLAGAVPAFGDKITDATPALADFIYDRLAGSLREQGFSAQEVDAVLALRP 575 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L + + + F + + + KR+ IL KK E+ ++P+ L +AE Sbjct: 576 QRLALVEKQLAAVRAFAALPESPALAAANKRVSNIL----KKAGEVDPHVNPELLQEKAE 631 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 + LYA + F D Y L + P++ FFD V+VN + ++R NR L Sbjct: 632 QDLYAALQRFVPEANAQFDAGDYTASLKTLAVLRAPVDAFFDDVMVNAEQLDLRLNRQGL 691 Query: 685 LQYIKNIILIVINVQKIV 702 L+ + + + V ++ ++ Sbjct: 692 LKSLHDAMNRVADLSRLA 709 >gi|329122051|ref|ZP_08250659.1| glycyl-tRNA synthetase beta subunit [Dialister micraerophilus DSM 19965] gi|327466858|gb|EGF12374.1| glycyl-tRNA synthetase beta subunit [Dialister micraerophilus DSM 19965] Length = 682 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 192/729 (26%), Positives = 349/729 (47%), Gaps = 74/729 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EE+PA++ E L+ + +K + + +++ Y TP RL + ++ Sbjct: 1 MSKNLLLEIGTEEMPAKIMPGLVEQLNQLANIEMKNARLSFDDVKVYATPRRLAVIIEKS 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S ++ + GP + G +A+ GF +S + I+K K+G+ A Sbjct: 61 SEIQSDENLRKRGPSIKAAFDKEGNPTRALQGFAKSQKVD------IEKIEKEGEYTWAN 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + I++VL I I + + +SM W T +IRP++ ++ + Sbjct: 115 ITNKGKKIQEVLPVIFKNLISNLNFSRSMNWGTEKE-----RFIRPIRWLVAM-----CD 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + GNI+ GHRF A +++++ + Y ++++ V++D + RR I+ Sbjct: 165 EEIIPVEFAHVKSGNISRGHRFLASDHVEIKNAESYKETMKKSFVIVDQDERRQMIIEGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +++ + L E+K LLEEI LVE+ G D+K+L LP + ++ +Q+ + Sbjct: 225 KKVSEKLNGILWENKGLLEEINYLVEYPTALYGKIDEKFLQLPVPAVVTPMRDHQRYYPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R + G L F+ V N + GN RV+ ARLEDA F+ D+ Sbjct: 285 RNKNGKLMPYFLTVRNGGTQ-SLENVKVGNERVLRARLEDAQFFFDEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVA 409 K L+ L ++ + +GT ++ +R+ L + A +L D + Sbjct: 334 ----------KSLENFRENLKRIN--YQEGMGTMLDKANRLSALTELFAKEWKLSDEEAK 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSK+DL T +V EF ELQG++GKEYA+L NE + +AI E PR + +P Sbjct: 382 DLKRASYLSKSDLATHMVTEFTELQGEMGKEYALLDNEKETVANAIFEQYLPRFSGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +SLADKLD L + P+GS+DP+ALRR T+GI+ I+ + KI ++ I Sbjct: 442 KSNIGRALSLADKLDNLTATFLRGLIPTGSQDPFALRRQTIGIVNILNDGKIHWDITSGI 501 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F R+K+ + D I +D+++A+ + ++ ++ Sbjct: 502 KKALDLLSDDEKQKNKVLLQILEFIRQRVKVIMSDLKIDYDIVDAV-SDDMTDIYSVFRK 560 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + E + E R+ I + ++I EK LY + Sbjct: 561 ANAVIEMNVKEEIE-LRQVVTRLSHITKDKN------PVKIQESLFEANEEKELYKAYIE 613 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + Y ++ + L ++ + I F D V+V V++ +V++NR+SLL + N+ Sbjct: 614 IADKLKAECEAHEYIKMFEPLKNLVKYINAFLDSVMVMVENEDVKNNRISLLIEVLNLYK 673 Query: 694 IVINVQKIV 702 + + K+V Sbjct: 674 MWGDFSKLV 682 >gi|325290522|ref|YP_004266703.1| glycyl-tRNA synthetase beta chain [Syntrophobotulus glycolicus DSM 8271] gi|324965923|gb|ADY56702.1| glycyl-tRNA synthetase beta chain [Syntrophobotulus glycolicus DSM 8271] Length = 690 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 198/732 (27%), Positives = 331/732 (45%), Gaps = 72/732 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M +FLLEI EE+PA+ L L E ++ + ++ Y TP RL L L GL Sbjct: 1 MAKNFLLEIGMEEMPAKFAPGVLSQLENNARKKLDELRIVCKEIKGYGTPRRLALLLSGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G+ KA+ GF R G++ + D +++ VY A Sbjct: 61 ADRQEDVCEEVKGPAQKAAYDSEGSPTKAVQGFARGQGVR-LEDLFVQEWNGVPYVY-AR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 I ++L I + +PK MRW + RP++ + + Sbjct: 119 KTLKGEEIINILPQFCLDMITGLSFPKPMRWGDHE-----VRFARPIRWLAAL-----CD 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ + G ++ GHR I + +Y+ DLE VL D E R+ I Sbjct: 169 KEIVPFRYAGLQSGRLSRGHRTLGN-SIVLSQASNYLEDLENVFVLGDQEKRKRVIWEQV 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 LA+AVG + ED+ LL EI LVE+ +G D Y+ +PEE+I +K +Q+ F Sbjct: 228 VSLAAAVGGYVEEDEGLLSEITHLVEYPTALIGEVDLNYMMMPEEVIITPMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R++EG L FI V N ++ + GN +V+ ARLEDA +++ D Sbjct: 288 RSKEGKLLPYFITVRNGDST-ALDKVKDGNKKVLKARLEDAAFYYRED------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L PL+ + A+L+ V++H K+GT +RV RI L +A+ + + Sbjct: 335 --------LKVPLEVQGAKLE--KVIYHDKLGTVAQRVERIVELSGIVAEKMALSTEEKE 384 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 LV R L+KADL T +V +FPELQG +G YA E+ I+EH PR +++P Sbjct: 385 LVKRTARLAKADLVTHMVYDFPELQGIMGAYYAKSNGESPEVVCGIKEHYLPRFTGDSLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + VS+ADKLD ++ + +P+GS+DPYALRR LG++ ++ E++ ++ L I Sbjct: 445 VSYTGRAVSIADKLDAIVGAFGCGIQPTGSQDPYALRRQALGVVSMLKEDRHNLSLRDLI 504 Query: 530 EDQNLI-------------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + I FF RL+ + +R+D +EA++ ++ Sbjct: 505 KASDEIFAGQGLALESFTKIQPLLEDFFAQRLRFIFQEEGLRYDTVEAVMAQGCAFPYSV 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L+ ++ + R + + E S++ LE +L+ Sbjct: 565 EKKARVLSRKREEEGFTSYVNAYVRCVNLSK--KTDGGEWSIDDLADRFELELASQLFET 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + +++ + I IE FD V++ V++ +R RL LL Sbjct: 623 V----PQVAQAVQENDFELAYQKAAKIVPHIEKLFDSVMIMVEEENLRRARLGLLGQCVE 678 Query: 691 IILIVINVQKIV 702 ++ + + +V Sbjct: 679 VLSCLGELSVLV 690 >gi|300705117|ref|YP_003746720.1| glycine tRNA synthetase subunit beta [Ralstonia solanacearum CFBP2957] gi|299072781|emb|CBJ44136.1| glycine tRNA synthetase, beta subunit [Ralstonia solanacearum CFBP2957] Length = 697 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 208/721 (28%), Positives = 351/721 (48%), Gaps = 70/721 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + L L +G++ + + + TP RL + G+ +P++ E+ Sbjct: 14 PPKALARLGEAFAQSLFDGLSAQGLLEEGAQVEGFATPRRLAAAIAGVRRTAPDRELREK 73 Query: 71 LGPRVGAGKKAIDGFLR------------STGLQTISDCQIKKDP-KKGDVYLAVLRKPK 117 + P A +G S G+++I+ +++ P K + Sbjct: 74 VLPVNIAFD--AEGKPAAPLLKKLAALAKSVGVESIAPETLERAPDGKAESLFYRYTARG 131 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 ++ D L+ + I +P PK M + + ++RP ++ +L +++I Sbjct: 132 AVLADGLQAALTQTIAGLPIPKVMTYQRPSG--DSVQFVRPAHRLIALL-----DDEVIP 184 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLA 236 + + GN+T GHRF + I + Y L+ + V+ R+ AI + + A Sbjct: 185 ARVLGLQSGNVTLGHRFLSAGEIVIPHATAYAGTLKSQGKVIAGYAERKEAIRAELLKAA 244 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 A +V + LL+E+ LVEW ++ F++++L +P+E + LT++TNQK F + Sbjct: 245 GAD--TVVMPEALLDEVNALVEWPVIYPCHFEEQFLEVPQECLILTMQTNQKYFALTDAQ 302 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N F++VSN+ A+D AI++GN RVV RL DA F++ D+ Sbjct: 303 GHLRNRFLIVSNL-ATDTPQAIIEGNERVVRPRLADARFFFEHDKK-------------- 347 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 KPL R+ L VV+H KIGTQ ERVSR++ + ++A + ADVA RA + Sbjct: 348 ------KPLADRVPLLSR--VVYHNKIGTQLERVSRLQAIAGQLADKLGADVAHASRAAL 399 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L+KADL T++V EFPELQG +G YA E A EH +PR + +P Sbjct: 400 LAKADLLTDMVGEFPELQGTMGTYYARHDGEAADVALACSEHYQPRFAGDALPGTATGTV 459 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------ 530 V+LADKL+TL+ W I P+G KDP+ALRR LGI+R+++E + + +++ +E Sbjct: 460 VALADKLETLVGIWGIGLAPTGEKDPFALRRHALGILRMLIEKPLALGIAEVLEVAAASF 519 Query: 531 ---------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + F +DRL+ YL D+ + +EA++ L IV ++ + F Sbjct: 520 EGIAAVKPDPAAITDFLYDRLRSYLKDKGYSTNEVEAVVSQRPQRLDDIVARLEAVRAFA 579 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + E + KRI IL KK + PQ L +AE+ L+ ++ H+ ++ Sbjct: 580 ALPQAEALAAANKRITNIL----KKTDIAIGSVQPQLLKEDAERALHQAVATSEPHVHDA 635 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + E ++ FFD V+V DD +RDNRL+LL + ++ V ++ K+ Sbjct: 636 FARGDFTTALKTLAGLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKL 695 Query: 702 V 702 Sbjct: 696 A 696 >gi|322374599|ref|ZP_08049113.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C300] gi|321280099|gb|EFX57138.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C300] Length = 678 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 333/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVD-VLKSLTFPVSMHWANN-----TFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQET-KIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDSKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLM--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SELVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTAAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYSLKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEAASALVEASKKEDFKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGTDT-----VDPALFENEEEKALAEAVESL-------VLSGTAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D+ VR NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMAEDQTVRQNRLAILSQLTKKAAKLARFNQI 675 >gi|254302499|ref|ZP_04969857.1| glycine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322691|gb|EDK87941.1| glycine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 686 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 196/728 (26%), Positives = 350/728 (48%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKNNFERKLKNNRIKFSGVRTYGTPRRLVLVADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELNIGPSRERAYKDGALTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + + KSMRWS + RP++ L + K++ Sbjct: 120 GKPTETILPEILKALVLEETFQKSMRWSDK-----TIRFARPIEWFLALYGG-----KVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ ++E V+++ RR I + Sbjct: 170 DFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIKENNVIINISERRKMIEEMISKSL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE+ +G+F +++L +P+E++ +++K +Q+ F ++ Sbjct: 229 LEDE-KADVDEGLLDEVTNLVEYPFAIVGNFSEEFLEVPQEVLIISMKVHQRYFPILNKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVGKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L + DN+ T +++ Sbjct: 504 LDALEADKVLKTDRVKVEADVLDFLKQRIINVFTDMKYRKDVILAVLDKDADNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+F I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQAVKRVFNIMKGSK------DVTIKEKLFKTDIEKTLYTESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 G ++++ K Y + L ++ I+ +F+ V+V +D+ VRDNR+ L YI N+ Sbjct: 618 VGEEAEKAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIGQLTYIMNLFG 677 Query: 694 IVINVQKI 701 + ++ K+ Sbjct: 678 KIASLNKL 685 >gi|313682490|ref|YP_004060228.1| glycyl-tRNA synthetase beta chain [Sulfuricurvum kujiense DSM 16994] gi|313155350|gb|ADR34028.1| glycyl-tRNA synthetase beta chain [Sulfuricurvum kujiense DSM 16994] Length = 678 Score = 659 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 211/722 (29%), Positives = 360/722 (49%), Gaps = 72/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K D+ + +L++ ++ Y+TP RL L+ + Sbjct: 5 LLIEIGVEELPAVPLLKELADIEKKWVAVLEKNALL-GEFEFYYTPRRLVLWHREFKTRQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++IEE G V G A GF + G++ + +K K +V P Sbjct: 64 DDRIEEFYGAPVDIAIKDGTPTPAALGFAKKCGVEFNQLSRAEKGGK--EVLYFSQNIPG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 R ++L ++ I+ + + KSMRW + H S+IRP++ + L E+++D Sbjct: 122 RSSIEILGEMIDQWIKSLSFGKSMRWGSNHE-----SFIRPIRWVNVTL-----GEELVD 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++L + + TY HR KV S+ HY L+E V L P+ RR +IL + +L Sbjct: 172 MELFGVRSASETYVHRISHFEAKKVNSIHHYFDLLKEGSVDLYPQSRRESILANFAQLEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ + D+DLL E++ + E +GSFD+ +L LP E+I ++K +Q+ F +EG Sbjct: 232 ENGISIEVDEDLLNEVVAITEHPTPLLGSFDESFLELPPEVIITSMKEHQRYFPVF-KEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++VSN D + +++GN RV+ RL DAL F++ D + + L++ Sbjct: 291 KLINAFVVVSNALTDDF-SKVIEGNERVLRPRLSDALFFYRNDLKKGLSTAGLEK----- 344 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--DADVALVDRAI 415 VVF +GT E++ R +V+ IA LI + + A +DRA+ Sbjct: 345 -------------------VVFMNGLGTLAEKIKREKVVASTIANLIYDNINPAHLDRAM 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E+V EF ELQG +G YA+ EN AI+E P G +P+ +S Sbjct: 386 DLAKADLMSEMVYEFTELQGLMGYYYALALGENADVATAIKEQYLPTGEESALPSTMLSA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED---- 531 V+++ K+DTLI ++I E P+GS+DP+ALRRA GII+I + ++I + S I+ Sbjct: 446 IVAMSMKVDTLIGMFSIGEIPTGSRDPFALRRAVNGIIKIAVTHQIPLNFSTLIDQLVSI 505 Query: 532 --------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND---NLLTIVDLIKHLNEF 580 +N+ F +RL + +I+A++ + + ++L I I+ +N Sbjct: 506 YPQGKEYKKNVETFVIERLAGAYV--GVNPSIIQAVVAKDANVELDILEIDRKIRAVNTI 563 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 SS + + KR+ IL + + + +++ +AE+ LY+ + E Sbjct: 564 ASSDSFVEAFSTFKRVSNIL---KDEAMDKGFKVNGTLFENDAERNLYSAAVSAISKSYE 620 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 +++ + D L ++ P++ FFD V+VN +D VR NR +L+ I I + +++ Sbjct: 621 TLEER-----LDALFALKAPLDTFFDNVMVNAEDLSVRANRKALVGMIYAEIYSIADIKN 675 Query: 701 IV 702 I Sbjct: 676 IT 677 >gi|290581046|ref|YP_003485438.1| putative glycyl-tRNA synthetase subunit beta [Streptococcus mutans NN2025] gi|254997945|dbj|BAH88546.1| putative glycyl-tRNA synthetase beta subunit [Streptococcus mutans NN2025] Length = 679 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 203/725 (28%), Positives = 345/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L+ + ++ + + TP RL + + L+ Sbjct: 3 KNLLVELGLEEMPAYIVKPSIKQLRQKMGQFLETNRLSFEKIEMFSTPRRLAIRVVHLAD 62 Query: 62 HSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP KA GF+R GL T + I+ KG+ Y+ V + Sbjct: 63 QQSDYSEDFKGPAKKIALDADGHFTKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTK 119 Query: 115 -KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + ++VL ++ +Q + +P +M W+ F +IRP+ +++ +L + Sbjct: 120 NEAGKPAKEVLGGLI-DVLQSLTFPVNMHWANH-----TFEYIRPVHTLVVLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + IDL+ +I G I+ GHRF ++ S Y DL V+ D + R + I+ Sbjct: 169 EAIDLNFLDIKSGRISRGHRFLGQET-QIASAASYETDLRAEFVIADAKEREDMIIEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++ + + D+ LL E++ LVE+ FMGSFD+KYL LPEE++ ++KT+Q+ FV R Sbjct: 228 KIEKTYNVSVEIDEALLSEVLNLVEYPTAFMGSFDEKYLELPEEVLVTSMKTHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V N +V+GN +V+ ARLED FW+ DQ Sbjct: 288 DQTGKLLPNFISVRNGN-EQFIENVVKGNEKVLLARLEDGEFFWREDQRL---------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVAL 410 + + +L + V FH +IG+ E + R + + +A+ D + A Sbjct: 337 ----------QIADLVEKLKL--VTFHERIGSLYEHMMRTKQIAAYLAEQADLTDQEKAE 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA + K DL T +V EF ELQG +G++YA L E+ + AI EH P +P Sbjct: 385 IERAASIYKFDLLTGMVGEFDELQGIMGEKYATLAGESQAVATAIREHYLPISSDGQLPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 +K+ +++ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ + +IPL + Sbjct: 445 SKVGAILAVADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDKFGWEIPLDRLVA 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ F R++ + D+ + D+ EA+L + V+ Sbjct: 505 NLYQFDFDSLTYQNQADVLAFIRGRVEKMI-DKSVPKDIREAVLDSSTHIVRLEVEAAAA 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + EK N + + E E+ L+ + + Sbjct: 564 LAEKADEDHFKASIESLSRVFNL---AEKSNH--NEMVDTSIFENEYEQELFDAVEELHF 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D L + I+ FFD +V VDD V+ NRL+LL + + Sbjct: 619 -------TEDMTDNVDRLFVLSPIIDAFFDNTMVMVDDEAVKKNRLNLLARLAQKANTIA 671 Query: 697 NVQKI 701 +I Sbjct: 672 AFNEI 676 >gi|198284299|ref|YP_002220620.1| glycyl-tRNA synthetase subunit beta [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666492|ref|YP_002426961.1| glycyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|226737046|sp|B7J7P8|SYGB_ACIF2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238689970|sp|B5EMS4|SYGB_ACIF5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|73612130|gb|AAZ78227.1| glycyl-tRNA synthetase beta chain [Acidithiobacillus ferrooxidans] gi|198248820|gb|ACH84413.1| glycyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518705|gb|ACK79291.1| glycyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 694 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 191/712 (26%), Positives = 320/712 (44%), Gaps = 61/712 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PAR Q + + I+ LL G+ + ++ Y TP RL L++K +S S + R GP Sbjct: 17 PAREQMPLQDAATGIIGQLLDAAGLQFGSIHGYVTPRRLALWIKDVSRQSLPQETLRRGP 76 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 V G A +GF RS G+ ++ + KG V + +L Sbjct: 77 LVARARDAQGKPTAAAEGFARSCGVSLDDLLTLETE--KGPVLAWREVGTAQDSHALLPE 134 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 I + +P K MRW S++RP++ +L +++D + + G Sbjct: 135 IASRLVTSLPLRKRMRWGAGSD-----SFLRPVRWLLL-----RQGGQVLDWKMFGLDAG 184 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++GHR H P +++ + Y L +A V++D RR I LA + + + Sbjct: 185 GESFGHRVHHPQAVRISTPAGYAGSLLQAKVMVDFAERRAHISGKMAALADEMAVTPILP 244 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL+EI GL EW V GSF YL +PEE + + +Q+ R R L ++ Sbjct: 245 EALLDEITGLNEWPVVLAGSFAADYLRVPEEALITVMMQHQRYVPLRGRNERLVPHYLFA 304 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 +N+ + D ++ GN+RV+ ARL DA FW +D+ Sbjct: 305 ANLHSRD-TQVVIDGNNRVLRARLADAAFFWDQDRQISLQTR------------------ 345 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEI 426 R + V+F +G+ ++ R++ L ++ D ++RA L K+DL + + Sbjct: 346 ----RAALAGVLFQDGLGSILDKTVRLQELAAALSPQFAVDAGDMNRAAALCKSDLLSGL 401 Query: 427 VREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTL 486 V EFPELQG +G YA EN AI +H P G + +P + +++ADKLDTL Sbjct: 402 VGEFPELQGIMGGHYARHDGENNRVATAIAQHYLPSGRDDEIPADAHGQCLAIADKLDTL 461 Query: 487 INFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-------------- 532 F+AI + P+G +DP+ALRRA LG++RI+L+ + + L + + Sbjct: 462 CGFFAIGKVPTGDRDPFALRRAALGVLRIVLDAGVPLNLDEAVTRTLAAYGGAFARNRTE 521 Query: 533 ---NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ FF DR+++Y + R D I A+L + L ++ L F + Sbjct: 522 IRSAILDFFQDRMRVYFREEGFRADQIAAVLSRQPHEPLDARQRLEALALFQAEHAAADA 581 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 L + I +I + K+ I PQY + E L+ + + +RY Sbjct: 582 LAAL--IKRINNLLRKEVISGDWPIDPQYFMDPVENTLWDYWQALEQPLHAQLAERRYTA 639 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 LL + ++ FFD V+V +D +R NRL+LL ++ L + + ++ Sbjct: 640 ALGLLAGLRPAVDQFFDGVMVLAEDPVLRQNRLALLARLQEAFLRIADFSQL 691 >gi|46446327|ref|YP_007692.1| glycyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|46399968|emb|CAF23417.1| probable glycyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] Length = 1017 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 211/735 (28%), Positives = 358/735 (48%), Gaps = 77/735 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DF++EI S+E+PA ++L + LL++EG+ ++ + Y TP R+ +Y+ LS Sbjct: 318 DFVIEIGSQELPASFVSIGGQNLERAIRALLEKEGISFERIVVYGTPRRIAVYIYQLSKG 377 Query: 63 SPEKIEERLGPRVGAGKK-------AIDGFLRSTG--------LQTISDCQIKKDPKKGD 107 P + E+ GP V + A +GF RS G +Q +I+ P KG Sbjct: 378 KPSQTIEKKGPPVEQAYQVDGTIKVAGEGFFRSLGMTTPTLAAIQNHEISEIEIRPIKGI 437 Query: 108 VYLA-VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 YL +++ R +L +P+ I + +PK MRW+ ++ RPL+ +L + Sbjct: 438 NYLFGSVKQEGRATTSILAEKLPLLIGSLDFPKKMRWADLE-----ITYARPLEWVLALF 492 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 + II + + ITYGHR +P I + +Y++ L + V+ DP R Sbjct: 493 GKD-----IIPFAIGNLFSDRITYGHRQLSPQAIHLDHAKNYLKSLHQHSVMADPNEREE 547 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 +IL L ++++E ++ +++ LVEW + + +F +++L +P+E++ + + Sbjct: 548 SILEQLSNLEKQEQIQIIEKNRVIPQVLNLVEWPYLTISTFREEFLKVPKEVLISEMVEH 607 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F G L N F++ +NI + I QGN +V++ARL D + ++ D Sbjct: 608 QKYFPVTDSNGTLKNLFVITANIIPT---EQIKQGNQKVLSARLSDGVFLYEED------ 658 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID- 405 L PL +L V F ++GT ++V RI K + L+ Sbjct: 659 --------------LKVPLASFNEKLK--KVTFQKELGTVYQKVERIIQHAKVLQILLGI 702 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 + LV+RA +LSKADL + +V EFPELQG IG+ YA+ E AI+EH PRG Sbjct: 703 STPILVERAALLSKADLASNMVYEFPELQGTIGRYYALANREEAEIAQAIDEHWMPRGEN 762 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +P + +SLADKLD LI ++I KP+ S DPYALRR LG+I+++++ + + L Sbjct: 763 APLPETETGTIISLADKLDNLIGCFSIGLKPTSSSDPYALRRQVLGVIKMLIKGQYSLHL 822 Query: 526 SQFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + +E Q+++ F +R+K D D IEA L ++ Sbjct: 823 EECLEKCISHFPTHIVKDKKQMTQDILSFITNRIKTVFQDYGFHKDEIEASLANGCQDIY 882 Query: 569 TIVDLIKHLNEFF--SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 +K L+ F S+++ KR L + N IS + L AE+ Sbjct: 883 DTFCRVKALHNFRQGSASQFHSLYEVYKRAKGQLNGYQTSN------ISAELLKEPAEQN 936 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY+++ E++ K Y+Q L+ ++ + + F+QV + D+ ++RDNRL+LL+ Sbjct: 937 LYSLLDRQQKAFAEAIKKKDYNQAYALIATMQPALAVLFEQVKILADEPQIRDNRLALLK 996 Query: 687 YIKNIILIVINVQKI 701 + N +++ KI Sbjct: 997 QVFNFFEEMLDFSKI 1011 >gi|294338462|emb|CAZ86788.1| glycine tRNA synthetase, beta subunit glyS [Thiomonas sp. 3As] Length = 721 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 205/731 (28%), Positives = 358/731 (48%), Gaps = 62/731 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLS 60 + L+E++ EE+P + E + L L+ +G+ +++ Y +P RL + + ++ Sbjct: 21 NLLVELFVEELPPKALPALGESFARTLAASLQSQGLAASDVKPTPYASPRRLAVRIPAVA 80 Query: 61 PHSPEKIE-ERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAV 112 + +K ++L P G A+ L + GL + +++++ K + Sbjct: 81 AKAADKAVAQKLMPVAVGLDADGKPTPALLKKLGALGLDADAAPRLRREGEGKAETLFID 140 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P + + L+ + AI K+P PK M + + ++RP ++ + A+ Sbjct: 141 TVAPGATLAEGLQKALAEAIAKLPIPKVMAYQLEDG-WTTVKFVRPAHGLVALHGAD--- 196 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPECRRNAILN 230 ++ + + G T+GHRF A PI ++ D Y L E V+ + RR I Sbjct: 197 --VVPVQALGLTAGRETHGHRFEAQADPIVLRDADSYADQLREQGAVIASFDARRAEIAA 254 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 A G L ++D LL+E+ LVE V + FD +L +P+E + LT+K NQK Sbjct: 255 QLQAAARQAGPGLHPIDDAALLDEVTALVERPNVLLCQFDPAFLAVPQECLILTMKANQK 314 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSNI +D +A+++GN RVV RL DA F+++D+ Sbjct: 315 YFPLLDAAGKLTHRFLVVSNISPADP-SAVIEGNERVVRPRLADAQFFFEQDRK------ 367 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD- 407 K L+ R+ LD VV+HA++G+QGER+ R++ L IA+ I Sbjct: 368 --------------KRLEDRVPGLD--KVVYHARLGSQGERMRRVQALAGGIARQIPPSF 411 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V +RA +L+K DL T++V EFPELQG +G+ YA E+ +AIE+H KPR + Sbjct: 412 PVEQAERAALLAKTDLLTDMVGEFPELQGIMGRYYAAHDGEDARVAEAIEDHYKPRFSGD 471 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++P + + ++LADK +TL+ + I E+P+G KDP+ALRR TLGI+R+++E I LS Sbjct: 472 DLPRSDVGFALALADKTETLVGLFGIGERPTGDKDPFALRRHTLGILRMLMERGQGIELS 531 Query: 527 QFIEDQNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +++E+ + F +DRL L ++ ++A+L L + Sbjct: 532 RYLENAVPVFSGVAGFSDPSADVQTFLYDRLANLLREQGWTAQEVDAVLALSPQILANVP 591 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 ++ + F + + + KR+ IL E + L+ AE L + Sbjct: 592 RRLEAVRAFAALPEAAALAAANKRVGNILRKSEGAKD--GSGFNADLLVEPAEIALSQAL 649 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + +Q+ Y +L ++ P++ FFDQV+VN +D +R NRL+LL ++ Sbjct: 650 NAVAPQVQQFYAAGDYTAALKMLAALKVPVDTFFDQVMVNAEDPALRANRLALLARLQEA 709 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 710 MNQVADLSRLA 720 >gi|237741059|ref|ZP_04571540.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 4_1_13] gi|229431103|gb|EEO41315.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 4_1_13] Length = 686 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 193/728 (26%), Positives = 349/728 (47%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + ++ Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKSNFERKLKNNRIKFSGVKTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + G KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELNIGPSRERAYKNGVLTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSDK-----TIRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR I + Sbjct: 170 DFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINNSL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 ++ D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 229 LEDE-KVDVDEALLDEVTNLVEHPFAIVGNFSEDFLEVPQEVLIISMKVHQRYFPVLSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II++ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIIKANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I ++L + DN+ +++ Sbjct: 504 LDALEADKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADNITNALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+F I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQTVKRVFNIMKGSK------DVTIKEKLFKNDIEKTLYTESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++++ K Y + L ++ I+ +FD V+V +D+ VRDNR+ L I N+ Sbjct: 618 VEEEVEKAIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRIGQLTCIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|228478361|ref|ZP_04062969.1| glycyl-tRNA synthetase, beta subunit [Streptococcus salivarius SK126] gi|228250040|gb|EEK09310.1| glycyl-tRNA synthetase, beta subunit [Streptococcus salivarius SK126] Length = 678 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 205/713 (28%), Positives = 340/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + R ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGRPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ F +IRP+ ++ +L E+ +DLD +I Sbjct: 132 G-VPEVLASLTFPVSMHWANN-----TFEYIRPVHTLTVLL-----GEEALDLDFLDIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYALSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ +A+L N + +++ L+E + + Sbjct: 517 DNQAEVLNFIKARVDKMMG--RTPKDIKDAVLAASNFVVADMLEAANALSEAAKADGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L I + + S K Sbjct: 575 AVESLSRAFNLAEKA-----DASVAVDASLFENDQEKALAKAIEEL--ELTGSASDK--- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 625 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANAVAAFNQL 675 >gi|313891695|ref|ZP_07825302.1| glycine--tRNA ligase, beta subunit [Dialister microaerophilus UPII 345-E] gi|313119973|gb|EFR43158.1| glycine--tRNA ligase, beta subunit [Dialister microaerophilus UPII 345-E] Length = 682 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 192/729 (26%), Positives = 347/729 (47%), Gaps = 74/729 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + LLEI +EE+PA++ E L+ + +K + + +++ Y TP RL + ++ Sbjct: 1 MSKNLLLEIGTEEMPAKIMPGLVEQLNQLANIEMKNARLSFDDVKVYATPRRLAVIIEKS 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 S ++ + GP + G +A+ GF +S + I+K K+G+ A Sbjct: 61 SEIQSDENLRKRGPSIKAAFDKEGNPTRALQGFAKSQKVD------IEKIEKEGEYTWAN 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + I++VL I I + + +SM W T +IRP++ ++ + Sbjct: 115 ITNKGKKIQEVLPVIFKNLISNLNFSRSMNWGTEKE-----RFIRPIRWLVAM-----CD 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E+II ++ + GNI+ GHRF A +++++ + Y ++++ V++D + RR I+ Sbjct: 165 EEIIPVEFAHVKSGNISRGHRFLASDHVEIKNAESYKETMKKSFVIVDQDERRQMIIEGL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +++ + L E+K LLEEI LVE+ G D+K+L LP + ++ +Q+ + Sbjct: 225 KKVSEKLNGILWENKGLLEEINYLVEYPTALYGKIDEKFLQLPVPAVVTPMRDHQRYYPL 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R + G L F+ V N + GN RV+ ARLEDA F+ D+ Sbjct: 285 RNKNGKLMPYFLTVRNGGTQ-SLENVKVGNERVLRARLEDAQFFFDEDRK---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVA 409 K L+ L ++ + +GT ++ +R+ L + A +L D + Sbjct: 334 ----------KSLENFRENLKRIN--YQEGMGTMLDKANRLSALTELFAKEWKLSDEEAK 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSK+DL T +V EF ELQG++GKEYA+L NE + +AI E PR + +P Sbjct: 382 DLKRASYLSKSDLATHMVTEFTELQGEMGKEYALLDNEKETVANAIFEQYLPRFSGDVLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +SLADKLD L + P+GS+DP+ALRR T+GI+ I+ + KI ++ I Sbjct: 442 KSNIGRALSLADKLDNLTATFLRGLIPTGSQDPFALRRQTIGIVNILNDGKIHWDITSGI 501 Query: 530 EDQ----------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F R+K+ + D I +D+++A+ + ++ + Sbjct: 502 KKALDLLSDDEKQKNKVLLQILEFIRQRVKVIMSDLKIDYDIVDAV-SDDMTDIYAVFRK 560 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + E + E R+ I + ++I EK LY + Sbjct: 561 ANAVIEMNVKEEIE-LRQVVTRLSHITKDKN------PVKIEESLFEANEEKELYKAYIE 613 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ + Y ++ + L ++ + I F D V+V V++ V++NR+SLL + N+ Sbjct: 614 IADKLKAECEAHEYIKMFEPLKNLVKYINAFLDSVMVMVENENVKNNRISLLIEVLNLYK 673 Query: 694 IVINVQKIV 702 + + K+V Sbjct: 674 MWGDFSKLV 682 >gi|332638278|ref|ZP_08417141.1| glycyl-tRNA synthetase subunit beta [Weissella cibaria KACC 11862] Length = 694 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 193/737 (26%), Positives = 326/737 (44%), Gaps = 85/737 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI EE+PA + A L + +E + Y ++ + TP RL + + ++ Sbjct: 1 MANFLLEIGLEEVPAHLVTPAINQLVERAENFMADERLAYGAIKPFSTPRRLAVLISDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + + EE GP G KA GF+R GL T D K+ +Y+ Sbjct: 61 EKAEDFQEEVKGPAKKVALDAEGNYSKAAQGFVRGQGLTT-DDITFKEFNGNEYIYVTKF 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K E + I+ + + +M+W F ++RP++ ++ +L + Sbjct: 120 EAGKPAAEVLTG--FKQVIEAMTFSTTMKWGRH-----TFEYVRPIRWMVALL-----DD 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ D+ + G + GHRF +++ S D Y L V D E R+ I Sbjct: 168 EVVPFDILGVATGRSSRGHRFLGHD-VEIASADQYEEALTSVFVQADAEARKQNIRTQVE 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +AS +V D+DLLEE+ +VE+ F G FD+ YL +P+E++ ++K +Q+ F Sbjct: 227 TIASDNNWTVVVDEDLLEEVNNIVEYPTAFAGGFDEGYLEVPDEVLITSMKEHQRFFHVV 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L FI V N A + ++ GN +V+ ARLEDA F+ DQ + + + K Sbjct: 287 DANGALLPHFISVRNGNA-EHIDNVIAGNEKVLVARLEDAKFFYHEDQKHDIDFYNYK-- 343 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 + V FHAK+G+ R + L IA + D A Sbjct: 344 --------------------LEVVSFHAKLGSVAAHTRRAKALAAIIAGRLAFTDDQQAK 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG +G++YA L E+ + AI EH P +P Sbjct: 384 LARAGEIYKFDLMTGMVGEFDELQGIMGEKYANLFGEDAAVAQAIREHYMPISADGELPA 443 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 + + ++LADKLD+L++F+A PSGS DPYALRRA G++ I+ +NK D+ + Sbjct: 444 SDLGKVLALADKLDSLLSFFAGGMVPSGSNDPYALRRAASGVVNILADNKWDLDIDGILS 503 Query: 529 ------------------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 ++ F DR+ L D +R D+I A+ + Sbjct: 504 DLIADINADAVKFGLPEEVMAELQNNVAAVVNFLTDRVVKALQDEGVRRDIINAVTKNNF 563 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + + + + L + A + + + R+ ++ + AE Sbjct: 564 ADTTQMFESAQVLAAHVNDANFREGVEALTRVMRLTTKN-----ATDATVDVALFENAAE 618 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K L+ ++ T + D K L ++ + +F++ +V V+D V++NRL+ Sbjct: 619 KALFEAVAPVATV--DGTDAK-----LAALLNLQPAVAAYFEETMVMVEDEAVKNNRLAT 671 Query: 685 LQYIKNIILIVINVQKI 701 L + + V N ++ Sbjct: 672 LHAVADEATKVANFLEL 688 >gi|320106526|ref|YP_004182116.1| glycyl-tRNA synthetase subunit beta [Terriglobus saanensis SP1PR4] gi|319925047|gb|ADV82122.1| glycyl-tRNA synthetase, beta subunit [Terriglobus saanensis SP1PR4] Length = 697 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 204/727 (28%), Positives = 339/727 (46%), Gaps = 58/727 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKG 58 M +FL EI EE+PARM A +L+ + LL E ++ ++ + TP RL + ++G Sbjct: 1 MAEFLFEIGLEEVPARMLASAEAELARRTMDLLGRERLLDGDVSFESFSTPRRLAVLVRG 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + P P+ EE +GP G A + F + G+ + + KG+ A Sbjct: 61 VRPQQPDVTEEIVGPSTKIAYKDGVPTAAAEAFAKKAGVSLDALKTV--TNAKGEYLGAD 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + R DV+ ++P I + W K+M W ++RPL+ +L +L Sbjct: 119 VHRAGRSASDVIVELLPKEIASIYWAKTMYWRAGK----PERFVRPLQWLLALL-----D 169 Query: 173 EKIIDLDLKEIPCGNITYGHRF-HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +KI+ + GN T GHR H P+ ++ Y LE A VL E RR I Sbjct: 170 DKIVPVTWAGKTAGNTTRGHRVLHGAEPVVIEHPGQYRERLEAAKVLPHVEDRRYKIRKA 229 Query: 232 AHRLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 + V ED L++ + L EW V +G F+++YL LPEE++ ++ +QK F Sbjct: 230 LDHVMRTVPETRWREDHALVDAVTHLTEWPTVLIGKFEEEYLALPEEVLVTVMRDHQKYF 289 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSS 349 + G LA F+ V N QA + G I++ GN RV+ AR DA FW DQ Sbjct: 290 AVEDKSGKLAPYFLTVLNTQADEAGEHIIRHGNERVLRARFNDARFFWDYDQKI------ 343 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA-----QLI 404 L R+ +L +V F +G+ ++ R+R L + + I Sbjct: 344 --------------TLADRVEKL--RNVTFQKDLGSYFDKTERVRALAASLEAIAADRKI 387 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D +D A +L+K DL +E+V+EF ELQG +G YA Q + AI + KP Sbjct: 388 PVDTKALDEAALLAKTDLTSELVKEFTELQGIVGGLYARAQGHSEIAAIAIYDQYKPTSM 447 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 ++++P + I +S+ADK DT+ +A+ +P+GSKDP+ALRRA GI+R++ E K+ I Sbjct: 448 VDDLPRSTEGILLSIADKADTIGGMFALGLEPTGSKDPFALRRAANGIVRMLGEAKLPIT 507 Query: 525 LSQF--------IEDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDLIK 575 LS+ + FF +R++ YL + + +D+++A+L +++ + + Sbjct: 508 LSEIATLATTDPETCSKVKGFFAERVEFYLREAKGQAYDVVKAVLAAGAEDVSDTLARAE 567 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + S S KR+ IL+ K ++L E++L Sbjct: 568 AVTAARGSEDFLAIAASFKRMANILSQARAKGDSAPFAAGKEFLTEPTERKLAEEAGRLA 627 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 + + Y Q + + ++ ++ FFD V+V +D ++R RL LLQ + + Sbjct: 628 AWVDGLRRKQEYEQALEAIATLRPHVDAFFDSVMVMAEDEKIRRARLGLLQRVLADFSKI 687 Query: 696 INVQKIV 702 + +IV Sbjct: 688 ADFSEIV 694 >gi|306825538|ref|ZP_07458877.1| glycyl-tRNA synthetase beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431899|gb|EFM34876.1| glycyl-tRNA synthetase beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 678 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 201/713 (28%), Positives = 340/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E+++ Sbjct: 75 AKKIALDGDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVENIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQET-KIQSALSYEEDLRAQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAVLLAEKAGLSVDETIDLARAASIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +KI +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSADGALPESKIGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYTLKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + D+++ ++ ++K E Sbjct: 517 GNKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSN---FVVADMLEAVSALVEASKEEN 571 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 F S + + + + EK E S + E EK L + + Sbjct: 572 FKSSVESLSRAFNLSEKA--EGSETVDSALFENEEEKALAEAVESL-------VLSGTAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V DD+++R NRL++L + + +I Sbjct: 623 QQLEQLFALSPIIDAFFENTMVMTDDQDIRQNRLAILSQLTKKAAKLARFNQI 675 >gi|306829215|ref|ZP_07462405.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis ATCC 6249] gi|304428301|gb|EFM31391.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis ATCC 6249] Length = 678 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 331/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMASFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDGDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGKPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVD-VLKSLTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF ++QS Y DL V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQET-EIQSALSYEEDLRAQFVIADPREREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLDVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A G +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNAEHLG-NVIKGNEKVLVARLEDGEFFWREDQKLI--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTAAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEAASALVEASKKEDFKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGSDT-----VDPALFENEEEKALAEAVESL-------VLSGTAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D+ +R NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMAEDQSIRQNRLAILSQLTKKAAKLARFNQI 675 >gi|161523777|ref|YP_001578789.1| glycyl-tRNA synthetase subunit beta [Burkholderia multivorans ATCC 17616] gi|189351462|ref|YP_001947090.1| glycyl-tRNA synthetase subunit beta [Burkholderia multivorans ATCC 17616] gi|160341206|gb|ABX14292.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans ATCC 17616] gi|189335484|dbj|BAG44554.1| glycyl-tRNA synthetase beta chain [Burkholderia multivorans ATCC 17616] Length = 699 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 200/715 (27%), Positives = 339/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +P++ + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G ++ ++++ K + + + D Sbjct: 79 VLPVSVALDAQGNPTAPLAKKLAALGRPNLTIAELERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--SDVQFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ R+ I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHASAYAETLRDKGRVIAHFGDRKETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPDALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAARVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDTLPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R+++E ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLIEKQLPLDLVSLLRTAYARFEGVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R ++A+L L +V + + EF A+ E Sbjct: 527 AESTDAIVAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRLDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|221200098|ref|ZP_03573141.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2M] gi|221206749|ref|ZP_03579761.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2] gi|221211279|ref|ZP_03584258.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD1] gi|221168640|gb|EEE01108.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD1] gi|221173404|gb|EEE05839.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2] gi|221180337|gb|EEE12741.1| glycyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2M] Length = 699 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 199/715 (27%), Positives = 339/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +P++ + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G ++ ++++ K + + + D Sbjct: 79 VLPVSVALDAQGNPTAPLAKKLAALGHPNLTIAELERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--SDVQFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + ++ Y L + V+ R+ I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIRHASAYAETLRDKGRVIAHFGDRKETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPDALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAARVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDTLPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R+++E ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLIEKQLPLDLVSLLRTAYARFEGVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R ++A+L L +V + + EF A+ E Sbjct: 527 AESTDAIVAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRLDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|330718878|ref|ZP_08313478.1| glycyl-tRNA synthetase subunit beta [Leuconostoc fallax KCTC 3537] Length = 683 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 196/728 (26%), Positives = 341/728 (46%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EE+PA + AAE L L++ + ++ Y TP RL + L + Sbjct: 1 MAHTFLLEIGLEEVPAHLVTGAAEQLVKRTQAFLEQHRLDVAEIKSYSTPRRLAVQLIDV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +S EE GP G KA GF R G + K Sbjct: 61 AENSASIDEEYRGPSLKIAKDDTGNWSKAAQGFARGKGATPDDFVE------KDGYVFVS 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 D+L I ++++ + M+W+ F ++RP++ ++ + ++ Sbjct: 115 KHISGVPAIDILANIGSEVVEQMKFSTYMKWANFD-----FLYVRPIRWLVALFDSD--- 166 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I+D + ++ G T GHRF + I + + Y L A V+ D R+ I Sbjct: 167 --IVDFSVLDVRSGRTTRGHRFLSSDNIDILNAQSYEETLALAHVVADAHQRKQKIRQQL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +A+ L D+DLLEE+ +VEW F GSFD+KYL +P+E++ +++ +Q+ F Sbjct: 225 DDIAAQHQWVLHVDEDLLEEVNNIVEWPTTFSGSFDEKYLAVPDEVLITSMREHQRFFFV 284 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 ++ L F+ V N A + ++ GN +V+ ARLEDA+ F++ DQ Sbjct: 285 TDQDQHLLPYFVSVRNGDA-NHLQNVIAGNEKVLIARLEDAVFFYQEDQQ---------- 333 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 K + M ++ L VFH KIG+ E + R++ L ++A+ D Sbjct: 334 ----------KTIADYMEKVKKL--VFHEKIGSVYEHMQRVKQLAAQLAESFDFTTQQQQ 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R+ + K DL T +V EF ELQG +G+ YA E+ + AI+EH P ++P Sbjct: 382 DLLRSADIYKFDLMTGMVGEFDELQGIMGEHYAKRFGESDAVAAAIKEHYLPVSADGDLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + + ++LADKLD +I+F+A PSGS DPY LRRA GI+RI+ + K I L+ + Sbjct: 442 VSDVGAVLALADKLDGIISFFAAGLIPSGSNDPYGLRRAATGIVRILKDKKWHIALADVL 501 Query: 530 ED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN-DNLLTIVDLIK 575 Q ++ F DR++ D+ IR D+I A + ++ +++ I + + Sbjct: 502 ATFIPKNSATEGADLQTILNFILDRVRKIESDKGIRSDIIAAGTQMKSISDIVYIDERVH 561 Query: 576 HLNEFFSSA-KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L + + + + R+ ++ E+ + L +AE+ LY + + Sbjct: 562 VLAQHAQDDANFREVMETLTRVQKLAH-----GYVAQGEVQVELLENDAEQALYRLTHEL 616 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + ++ + L ++ + I+ +FD +V VDD +++NRL+ L I +I+ Sbjct: 617 NLDV---LVNEGAEVVYTTLANLTQAIQDYFDNTMVMVDDERIKNNRLTQLSQINRLIMQ 673 Query: 695 VINVQKIV 702 + ++ +IV Sbjct: 674 LGDLNQIV 681 >gi|89902455|ref|YP_524926.1| glycine--tRNA ligase [Rhodoferax ferrireducens T118] gi|89347192|gb|ABD71395.1| Glycine--tRNA ligase [Rhodoferax ferrireducens T118] Length = 744 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 204/772 (26%), Positives = 338/772 (43%), Gaps = 105/772 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--------------IYQNMRQYWT 48 + L+E++ EE+P + K E + + L ++ + M + + Sbjct: 5 NLLVELFVEELPPKALKKLGEAFAQQIYASLSDQWLISMPGTMAQDPDQADPPAMDVFAS 64 Query: 49 PHRLFLYLKGLSPHSPEKIEERL-GP------RVGAGKKAIDGFLRSTGLQTISDCQIKK 101 P RL + ++ + +P+ + P G A+ L++ G Sbjct: 65 PRRLGVLIRSVLLKAPDTQKLVKLMPVTVGLDAAGQATSALLKKLQALGADLTDPVAAVA 124 Query: 102 D-----PKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISA 152 K + ++ L+ + AI K+P PK M + S+ Sbjct: 125 ALRRAPDGKVEALFYDSLVTGATLDAGLQKALEEAIAKLPIPKVMSYQLETDCELPGWSS 184 Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRD 211 +++RP ++ + ++ + + + GN T GHRF A P+ + D Y Sbjct: 185 VNFVRPAHGLVAL-----RGSTVVPVKVLGLKAGNSTQGHRFEAKVSPVVIADADSYAAT 239 Query: 212 LEE-AMVLLDPECRRNAILNDAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFD 268 LE+ V+ E RR AI+ + A +G ++ D+ LL+E+ GLVE V + +FD Sbjct: 240 LEQDGAVIAGFEQRRFAIVQQLAQAAERLGPSYRVLMDEALLDEVTGLVERPNVLVCAFD 299 Query: 269 KKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAA 328 ++L +P+E + LT+K NQK F G L N F++VSNI D +A++ GN RVV Sbjct: 300 AQFLDVPQECLILTMKANQKYFPLLDAAGKLTNQFLVVSNISPLDA-SAVIGGNERVVRP 358 Query: 329 RLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGE 388 RL DA F+ +D+ K L R+ L VV+H K+GTQGE Sbjct: 359 RLADAKFFFDQDRK--------------------KTLASRVEGLS--KVVYHNKLGTQGE 396 Query: 389 RVSRIRVLGKKIAQLIDADVALVDR-------AIVLSKADLCTEIVREFPELQGKIGKEY 441 R R++ + IA+ + AD + D A +L+KADL T++V EFPELQG +G Y Sbjct: 397 RTERVQSIASAIARQL-ADAGVADAFDGNADNAAMLAKADLLTDMVGEFPELQGIMGGYY 455 Query: 442 AVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKD 501 A AIE+H KPR + +P N + V+LADKL+TL+ + I P+G KD Sbjct: 456 ARHDGLREDIAFAIEDHYKPRFAGDELPRNTTGLVVALADKLETLVGMFGIGNVPTGDKD 515 Query: 502 PYALRRATLGIIRIILENKIDIPLSQFIEDQNL--------------------------- 534 PYALRR LG+IR+++E ++ + L+ + Sbjct: 516 PYALRRHALGVIRMLVEKELPLDLNGLLACAFEEPRWGTAFKAGTDLGAAAPSVYQKFDA 575 Query: 535 ----ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 F DRL L ++ ++A+L + L I + + F + + Sbjct: 576 ARPLADFIFDRLAGSLREQGYSAQEVDAVLALQPQRLGDIPKRLAAVRAFAALPEAPALA 635 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KRI IL KK ++ +S L AE L+A + + Y Sbjct: 636 AANKRISNIL----KKAPDVDPHVSEVLLTEPAELALFAAMQSLAPLANAQFEALDYTAS 691 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD VLVN + ++R NR LL+ + + + V ++ ++ Sbjct: 692 LQTLAALRAPVDAFFDSVLVNAEQLDLRLNRQGLLKSLHSAMNRVADLARLA 743 >gi|315637198|ref|ZP_07892419.1| glycyl-tRNA synthetase beta subunit [Arcobacter butzleri JV22] gi|315478504|gb|EFU69216.1| glycyl-tRNA synthetase beta subunit [Arcobacter butzleri JV22] Length = 671 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 189/716 (26%), Positives = 347/716 (48%), Gaps = 67/716 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA ++ +L++ ++ + ++TP RL L+ + Sbjct: 5 LLIEIGVEELPAIPFLNELPNIEKKWSDILEKNRLLC-DFDFFYTPRRLVLWHREFQVKQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E+ G + G A F G+ KKD KG+V Sbjct: 64 EDSTIEQFGAPIKIAYKDGVPTGAAISFATKLGVDVS--VLEKKDLGKGEVLYFKQEVIG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L ++ + + + KSMRW++ S+IRP++S+ +L ++I+D Sbjct: 122 SESKTLLNEMINEFVASLNFGKSMRWASRTD-----SFIRPIRSLSVLL-----GDEIVD 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +L + N ++ HR + P Y L+++ V+L P+ RR IL + Sbjct: 172 AELFGVKSSNFSFAHRMVSYEPFTYSFAGDYFCKLDKSGVILYPDERRKIILEQMKNIEQ 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +++ D +LLEE++ + E+ +G FD+++L LPEE+I ++K NQ+ F ++G Sbjct: 232 RHNIKIEIDTELLEEVVAITEYPTALIGKFDEEFLELPEEVIVTSMKENQRYFAVY-KDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN + +D G I+QGN +V+ RL DA+ F+K D N + LK+ Sbjct: 291 NLTNNFIVVSNAKTNDFG-YIIQGNEKVLRPRLADAMFFYKNDIKNGLSNEGLKK----- 344 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDRAIV 416 +VF +G+ ++ R + +A + + L+ RA++ Sbjct: 345 -------------------LVFVEGLGSMYDKCEREAKIASYLANTFEVKEKELIQRAVM 385 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSKADL +E+V EF ELQG +G YA + E+ A++E P G +P+N S Sbjct: 386 LSKADLMSEMVYEFTELQGLMGYYYAKIAKEDNLVSLALKEQYLPTGEDSELPSNVFSSI 445 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL-- 534 V+L++KLD L+ +++ + P+GSKDP+ LRRA GI++I +E+K+ I LS+ I++ + Sbjct: 446 VALSNKLDNLMALFSVGKIPTGSKDPFGLRRAAAGIVKIAMEHKLPIDLSKIIDELSTNY 505 Query: 535 --------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 I FF++RL + +++A+L ++ I + LN S Sbjct: 506 KNLDKKVLIEFFNERLFKIFE---VNPTVLKAVLASGETDIYKISQKLCALNPIVQSDNF 562 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + ++ + KR+ I+ + + L I + + EK L+A ++ + +K Sbjct: 563 KDYVATFKRVANII---KDVDVNSKLLIDEKLFEDKEEKELFAKFNEVQSKT-----YKT 614 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + + L ++ ++ FFD V VN ++ +++ NR +L+ I + ++++I Sbjct: 615 YDEELEALFALKPELDNFFDNVFVNHENEKIKINRKNLVGVIYQGFRKIADIKEIT 670 >gi|152990481|ref|YP_001356203.1| glycyl-tRNA synthetase subunit beta [Nitratiruptor sp. SB155-2] gi|151422342|dbj|BAF69846.1| glycyl-tRNA synthetase, beta subunit [Nitratiruptor sp. SB155-2] Length = 678 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 198/722 (27%), Positives = 337/722 (46%), Gaps = 69/722 (9%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + L+EI EE+PA K ++ +L+ G++ + ++TP RL L+ + Sbjct: 3 MTEPLLIEIGVEELPAIPFLKELPNIEKKWEKILEANGLLCE-FEFFYTPRRLVLWHRNF 61 Query: 60 SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +E G + G A GF + G+ K+ ++ Sbjct: 62 KTKQDTTYQEYFGAPLHIAFKDGQPTPAATGFAKKCGVSVEELSTTKR--GSTEILYYKK 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + ++L +V ++ + + KSMRW S+IRP++ + L E Sbjct: 120 EISGKPSVEILPEMVYEWLKSLDFGKSMRWGNLKE-----SFIRPIRWGIINL-----GE 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + I +L I N TY HR P++V + Y L+ VLL PE R I + Sbjct: 170 RFIKAELFGITTANYTYLHRSVTTEPVQVANAKEYFEVLKNGGVLLYPEARYEKIDVEFA 229 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + G+ + +D++LL E++ + E+ GSF++K+L LP E+I ++K +Q+ F Sbjct: 230 GIEKE-GIVIEKDEELLAEVVAITEFPTALKGSFEEKFLQLPPEVIVTSMKEHQRYFPVY 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +EG L N F+ VSN D + IV+GN RV+ ARL DAL FW+ D + L+ Sbjct: 289 -KEGKLQNGFVFVSNAYTDDF-SLIVKGNERVLKARLSDALFFWENDLKKGLDFEGLE-- 344 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ-------LIDA 406 +VVF +GT ++ R + + + Sbjct: 345 ----------------------NVVFMDGLGTLFDKEVRELKIANHLLEDYRALFSESGV 382 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A+++RAI+LS ADL TE+V EF ELQG +G YA+ Q E+ + AI+E P G Sbjct: 383 TKAMLERAIMLSYADLLTEMVYEFTELQGIMGYYYALAQGEDEAVALAIKEQYLPSGEES 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 ++P+ S V+L+ KLDTL+ +++ + P+GSKDP+ LRRA G+IRI+L +D +S Sbjct: 443 DLPSTLFSALVALSKKLDTLMALFSVGKIPTGSKDPFGLRRAANGVIRIVLAYNLDFDIS 502 Query: 527 QFIEDQ--NLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ F ++L+ + +R D+ +I+A++ +L+ I IK L Sbjct: 503 KIFDEIRGEYKDFDTNKLENFFIERINQFYDVNPSVIKAVIESGERDLVQIDKKIKALAT 562 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 S+ + + KR+ I+ + + + E EKRL+ ++ T Sbjct: 563 IVESSDFKDIFTTFKRVANIV---KDVDVSKETPVDENLFESEYEKRLWDRFNEVYTK-- 617 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ Y D L + I++FFD VLVN +D +R NR +L+ I + +++ Sbjct: 618 ---EYPDYESRLDALFGLKHDIDLFFDNVLVNAEDERLRQNRKNLIASIYKAFKEIADIK 674 Query: 700 KI 701 +I Sbjct: 675 EI 676 >gi|293365102|ref|ZP_06611819.1| glycyl--tRNA synthetase [Streptococcus oralis ATCC 35037] gi|307702190|ref|ZP_07639150.1| glycyl-tRNA synthetase, beta subunit [Streptococcus oralis ATCC 35037] gi|291316552|gb|EFE56988.1| glycyl--tRNA synthetase [Streptococcus oralis ATCC 35037] gi|307624203|gb|EFO03180.1| glycyl-tRNA synthetase, beta subunit [Streptococcus oralis ATCC 35037] Length = 678 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 334/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMVAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ AF +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVD-VLKSLTFPVSMHWANN-----AFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQET-KIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTAAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEAASALVEASKKEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGTDT-----VDPALFENEEEKALAEAVESL-------VLSGAAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D+ VR NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMAEDQTVRQNRLAILSQLTKKAAKLARFNQI 675 >gi|322372433|ref|ZP_08046969.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C150] gi|321277475|gb|EFX54544.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. C150] Length = 678 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 198/712 (27%), Positives = 336/712 (47%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 VP + + +P SM W+ F +IRP+ +++ +L ++ +DLD +I G Sbjct: 132 GVPEVLASLTFPVSMHWANN-----TFEYIRPVHTLVVLL-----GDEALDLDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ + Sbjct: 182 RVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQIE 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI V Sbjct: 241 EGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 340 DLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAKQAGLTAEETAAVARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAADGALPETKVGAILALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSYD 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L+E + + Sbjct: 518 NQAEVLNFIKARVDKMMG--RTSKDIKEAVLAGSNFVVADMLEAANALSEAAKTDGYKAA 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+ ++ + EK L + S K Sbjct: 576 VESLSRAFNLAEKA-----DASVVVNAGLFENDQEKALAQAAESL--ELTGSASDK---- 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D +++NRL++L + V ++ Sbjct: 625 -LAQLFALSPVIDAFFDNTMVMAEDEALKNNRLAILASLVAKANKVAAFNQL 675 >gi|297569675|ref|YP_003691019.1| glycyl-tRNA synthetase, beta subunit [Desulfurivibrio alkaliphilus AHT2] gi|296925590|gb|ADH86400.1| glycyl-tRNA synthetase, beta subunit [Desulfurivibrio alkaliphilus AHT2] Length = 696 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 210/723 (29%), Positives = 343/723 (47%), Gaps = 66/723 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + LLEI +EEIPA A + L L L+E + + + TP RL + ++GL+ Sbjct: 9 ELLLEIGAEEIPAGYLMPALKALQAGLAQGLREHELAFGEINTGATPRRLAVSVQGLAAR 68 Query: 63 SPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+++EE +GP A KA GF + G+ + + Q+ P KG+ A + + Sbjct: 69 QPDRVEEAMGPPKKAAFDADGKPTKAALGFASTKGVS-VDELQVVATP-KGEYLQARVEQ 126 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P R ++L ++P I +P+PKSMRW + + RPL+ +L + Sbjct: 127 PGRATAEILNDLLPGLITGLPFPKSMRWGNGKT-----HFARPLRWLLAVYQGRS----- 176 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L+E+ G+ T+GHRF AP I+ + Y L + VL+DP RR A++ + +R Sbjct: 177 LAFSLEELSAGDHTWGHRFLAPQSIQATTFSTYRDQLRQYQVLVDPAERRQAMVAEINRA 236 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A+ G ++ D +L E + LVE GSF +++L LP E++ +++ +QK F Sbjct: 237 AAEAGGRILPDPELEETVTNLVEAPFAICGSFAERFLQLPREVLITSMREHQKYFAVVDE 296 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 + L F+ V+N + D A +G+ RV+ ARLEDA F+ DQ Sbjct: 297 QDNLQPRFVAVNNTRVKDP-AVGAEGHQRVLRARLEDAFFFFNEDQQ------------- 342 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDRA 414 +PL Q RL+ ++F ++GT ++ +R+ L ++A ++ A V RA Sbjct: 343 -------RPLSQLAGRLN--GIIFQHQLGTMADKTARLEQLAGRLADEFAPELSAAVRRA 393 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L KADL T +V EFP LQG IG++YA Q E+ +A+ H P +P ++ Sbjct: 394 AQLCKADLLTSMVDEFPSLQGNIGRDYARRQGESEEVAEALYSHYLPLRAGGQLPQDRTG 453 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------------LENKID 522 + +AD+LDTL + I K +G+ DP+ LRR +G+I ++ +E + Sbjct: 454 ALLGIADRLDTLAGCFGIGLKVTGAADPFGLRRQAVGLIHLLLGHKLKLPLKPWIETALS 513 Query: 523 IPLSQFIEDQNL-----ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 + Q E + F RL L R + + +EA+L + + I+ L Sbjct: 514 LYDCQLQEQPAAARDRLLEFIKGRLANDLTGRGLPAEAVEAVLSVDFQEVNDCQARIEAL 573 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 S S KR+ I+ I PQ L AEK L AV++ Sbjct: 574 VAVSSQPSFTLLAGSFKRVNNIIKDNR------DDRIDPQLLQEPAEKELAAVLARVTAA 627 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 + Y Q + + ++ EPI+ FFDQV+V +D +++ NRL+LL I + V + Sbjct: 628 AAPLLRDGAYRQTLEHILTMKEPIDRFFDQVMVMAEDEQLKRNRLALLTAIAALFRRVGD 687 Query: 698 VQK 700 + Sbjct: 688 FSR 690 >gi|294784336|ref|ZP_06749627.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_27] gi|294487908|gb|EFG35263.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_27] Length = 686 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 194/728 (26%), Positives = 348/728 (47%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKTNFERKLKNNRIKFSGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + G KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGVLTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSDK-----TIRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR I + Sbjct: 170 DFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINNSL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 229 LEDE-KADVDEALLDEVTNLVEHPFAIVGNFSEDFLEVPQEVLIISMKVHQRYFPVLSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II++ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIIKANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I ++L + DN+ +++ Sbjct: 504 LDALEADKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADNITNALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+F I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQTVKRVFNIMKGSK------DVTIKEKLFKNDIEKTLYTESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++++ K Y + L ++ I+ +FD V+V +D+ VRDNR+ L I N+ Sbjct: 618 VEEEVEKAIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRIGQLTCIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|166714071|ref|ZP_02245278.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzicola BLS256] Length = 752 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 190/788 (24%), Positives = 327/788 (41%), Gaps = 125/788 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTGDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++I +L + IT GHRF + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GNEVIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+GT ++V+R+ L + IA + D Sbjct: 348 GD----------------------GLASVTYQAKLGTVADKVARVAALAEVIAPQVGTDP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 LQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDVDLREL 505 Query: 529 IEDQNLILF----------------------------------FHDR------------- 541 ++ + H R Sbjct: 506 LKRALNAAYNALINSAPFEVKALKLHLGDSGIVAEELPEENSAIHARRFTIPDLAPNSSE 565 Query: 542 --------LKLYLHDRDIRHDLIEAILR--------------------PENDNLLTIVDL 573 L+ Y D+ + A+ + +L Sbjct: 566 LYDFILDRLRGYYADKGVPATHFNAVAALFSGTSETAPAPTGVGAHPGATHGSLYDFDRR 625 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I + F + + + + KRI IL K EI +I L AE+ L + Sbjct: 626 IDAIGIFATLPEAQALAAANKRIRNILR---KVEGEIPGDIDTALLCEPAEESLAEAVEA 682 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + Sbjct: 683 AIGATGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDPQLRANRLALLKKLGDRLG 742 Query: 694 IVINVQKI 701 V ++ + Sbjct: 743 SVAAIEHL 750 >gi|78067498|ref|YP_370267.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. 383] gi|77968243|gb|ABB09623.1| glycyl-tRNA synthetase beta chain [Burkholderia sp. 383] Length = 699 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 204/715 (28%), Positives = 341/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++I+ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRIVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGHVIAHFVDRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA +I AD L RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPVIGADATLAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLKSLLRTAHARFEGVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAILAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K S + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGASGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|15607085|ref|NP_214467.1| glycyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5] gi|11387164|sp|O67898|SYGB_AQUAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|2984350|gb|AAC07870.1| glycyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5] Length = 664 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 209/715 (29%), Positives = 340/715 (47%), Gaps = 73/715 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+PA + + A + L + LL ++ Y TP RL LY K Sbjct: 4 ELLIEIGTEELPAGVINPALDYLKDKINSLLNAR-----QVKTYGTPRRLTLYFKDFENE 58 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 EK E GP G KA++GFL+ +KKD KG+ V + Sbjct: 59 RKEKKEVIWGPPKNVAYDEKGNPTKALEGFLKKNNASLEEVKVLKKD--KGEYVAIVRKV 116 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++ + L+ + VP+PK MRW + ++ RP++ IL + ++ Sbjct: 117 IEKSPIEKLQEEFEEILLSVPFPKRMRW----TSSKRITFSRPVRWILALFNG-----QV 167 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L E+ N TYGHRF + + + + Y + L+E V+ D R+ IL + Sbjct: 168 LKLRFGELESSNKTYGHRFLSKGEVTINNPADYEKTLKEHYVIPDFNERKEIILRALEKS 227 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + VG + + L+EE+ LVE+ +G FD+KYL LP +I +Q+ F + Sbjct: 228 SQEVGGKPSYPEGLVEEVTNLVEYPFPVLGKFDEKYLELPPLVITTVAAHHQRFF-CFEK 286 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N F+ +SN + I +G +V+ ARLEDAL F++ D Sbjct: 287 DGKLLNYFLGISN---NKPNEKIKEGYEKVLRARLEDALFFYRED--------------- 328 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L K L + L V+FH K+G+ E+ R+ + +K+ L+ + V A+ Sbjct: 329 -----LKKDLKSLIPELK--KVLFHPKVGSMYEKEERMEKIAQKLCPLLKCEWEKVKEAV 381 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 LSK DL TE+V+E ELQG +G YA Q + A+ E PR + VP Sbjct: 382 WLSKVDLLTEMVKELDELQGYMGYVYAKAQGYDEEVAKALWEQYFPRSLEDKVPETTTGT 441 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------QF 528 +SL+DK+D L +F+ E P GS DPY LRR+ GII+I+ +D+ L +F Sbjct: 442 ILSLSDKIDNLYSFFKAGEIPKGSSDPYGLRRSAFGIIKIVDVKNLDLNLEDFKEIYGEF 501 Query: 529 IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGE 587 + L+ F RL YL D D++ A+L +++ ++ L E S + Sbjct: 502 KQYPKLVEFLKQRLISYLED--YPVDIVRAVLNVYSPMEPYKVINSVRVLYEASKSPEFP 559 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + +AKR+ +I+ + K + E+ + L EAE+ LY +++ ++K Sbjct: 560 SVVEAAKRVIRIIPKDWK-----NYEVDEKLLSEEAERELYQKLTE--------FENKEL 606 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 +LL + E I+ FFD V V +D ++R+NR+SLL+ ++N+ + +IV Sbjct: 607 KSPLELL-PLKEYIDKFFDNVKVMAEDEKIRNNRISLLKRVENLFRTFGDFNEIV 660 >gi|24378935|ref|NP_720890.1| glycyl-tRNA synthetase subunit beta [Streptococcus mutans UA159] gi|81844378|sp|Q8CWY5|SYGB_STRMU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|24376820|gb|AAN58196.1|AE014890_9 putative glycyl-tRNA synthetase (beta subunit) [Streptococcus mutans UA159] Length = 679 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 202/725 (27%), Positives = 344/725 (47%), Gaps = 76/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L+ + ++ + + TP RL + + L+ Sbjct: 3 KNLLVELGLEEMPAYVVKPSIKQLRQKMGQFLETNRLSFEKIEMFSTPRRLAIRVVHLAD 62 Query: 62 HSPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP KA GF+R GL T + I+ KG+ Y+ V + Sbjct: 63 QQSDYSEDFKGPAKKIALDADGHFTKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTK 119 Query: 115 -KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + ++VL ++ +Q + +P +M W+ F +IRP+ +++ +L + Sbjct: 120 NEAGKPAKEVLGGLI-DVLQSLTFPVNMHWANH-----TFEYIRPVHTLVVLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 + +DL+ +I G I+ GHRF ++ S Y DL V+ D + R + I+ Sbjct: 169 EALDLNFLDIKSGRISRGHRFLGQET-QIASAASYETDLRAEFVIADAKEREDMIIEQIR 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + + D+ LL E++ LVE+ FMGSFD+KYL LPEE++ ++KT+Q+ FV R Sbjct: 228 EIEKTYNVSVEIDEALLSEVLNLVEYPTAFMGSFDEKYLELPEEVLVTSMKTHQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V N +V+GN +V+ ARLED FW+ DQ Sbjct: 288 DQTGKLLPNFISVRNGN-EQFIENVVKGNEKVLLARLEDGEFFWREDQRL---------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVAL 410 + + +L + V FH KIG+ E + R + + +A+ D + A Sbjct: 337 ----------QIADLVEKLKL--VTFHEKIGSLYEHMMRTKQIAAYLAEQADLTDQEKAE 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA + K DL T +V EF ELQG +G++YA L E+ + A+ EH P +P Sbjct: 385 IERAASIYKFDLLTGMVGEFDELQGIMGEKYATLAGESQAVATAVREHYLPISSDGQLPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 +K+ +++ADKLDTL++F+++ PSGS DPYALRRAT GI+RI+ + +IPL + Sbjct: 445 SKVGAILAVADKLDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDKFGWEIPLDRLVA 504 Query: 529 ------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +++ F R++ + D+ + D+ EA+L + V+ Sbjct: 505 NLYQFDFDSLTYQNQADVLAFIRGRVEKMI-DKSVPKDIREAVLDSSTHIVRLEVEAAAA 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + EK N + + E E+ L+ + + Sbjct: 564 LAEKADEDHFKASIESLSRVFNL---AEKSNH--NEMVDTSIFENEYEQELFDAVEELHF 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + D L + I+ FFD +V VDD V+ NRL+LL + + Sbjct: 619 -------TEDMTDNVDRLFVLSPIIDAFFDNTMVMVDDEAVKKNRLNLLDRLAQKANTIA 671 Query: 697 NVQKI 701 +I Sbjct: 672 AFNEI 676 >gi|254247265|ref|ZP_04940586.1| Glycyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia PC184] gi|124872041|gb|EAY63757.1| Glycyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia PC184] Length = 699 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 339/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +P+K + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELVFERYATPRRLAVVVQNVRAVAPDKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNASIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++++ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFAGVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|256846627|ref|ZP_05552083.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_36A2] gi|256717847|gb|EEU31404.1| glycyl-tRNA synthetase beta subunit [Fusobacterium sp. 3_1_36A2] Length = 686 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 195/728 (26%), Positives = 349/728 (47%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKTNFERKLKNNRIKFSGVRTYGTPRRLVLIADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + G KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKNGVLTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFSK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + +PKSMRWS + RP++ L + +K++ Sbjct: 120 GKPTETILPEILKALVLEETFPKSMRWSDK-----TIRFARPIEWFLALY-----GDKVV 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S++ Y++ + E V++D RR I + Sbjct: 170 DFEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINNSL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F +++ Sbjct: 229 LEDE-KADVDEALLDEVTNLVEHPFAIVGNFSEDFLEVPQEVLIISMKVHQRYFPVLSKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT ++V R + + + + + + + R Sbjct: 330 ----LKTPLDNNVEKLKT--VVFQKDLGTIYDKVKRCEKIAEFLVEKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKGGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II++ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIIKANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I ++L + DN+ +++ Sbjct: 504 LDALEADKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILSVLDKDADNITNALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ + E S K + L + KR+F I+ + + I + + EK LY Sbjct: 564 VRVITEKLSKDKMQALLQTVKRVFNIMKGSK------DVTIKEKLFKNDIEKTLYTESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 +++++ K Y + L ++ I+ +FD V+V +D+ VRDNR+ L YI N+ Sbjct: 618 VEEEVEKAIKEKEYADYFEKLFTLVPTIDKYFDTVIVMDEDKNVRDNRIGQLTYIMNLFD 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 RIAYLNKL 685 >gi|270293041|ref|ZP_06199252.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M143] gi|270279020|gb|EFA24866.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M143] Length = 678 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 333/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMATFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVESIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVD-VLKSLTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQET-KIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEQGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYDLKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASLNFVVADMLEAASALVEASKQEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGTDT-----VDPALFENEEEKALAEAVESL-------VLSGTAG 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D++VR NRL++L + + +I Sbjct: 623 QQLEQLFALSPIIDAFFENTMVMAEDQDVRQNRLAILSQLTKKAAKLARFNQI 675 >gi|296273209|ref|YP_003655840.1| glycyl-tRNA synthetase subunit beta [Arcobacter nitrofigilis DSM 7299] gi|296097383|gb|ADG93333.1| glycyl-tRNA synthetase, beta subunit [Arcobacter nitrofigilis DSM 7299] Length = 671 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 201/716 (28%), Positives = 352/716 (49%), Gaps = 67/716 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K ++ +L++ + + ++TP RL L+ + + Sbjct: 5 LLIEIGVEELPAIPFLKELPNIEKKWSDILEKFKLS-TDFDFFYTPRRLVLWHREFNLTQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E+ G V G A GF + ++ I + K +V + Sbjct: 64 EDTTVEQYGAPVAIAYKDGKPTGAAIGFAKKCAIEVDDIKTI--NNGKDEVLYFKKEEKG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +D+L ++ I + + KSMRW++ S+IRP++S++ +L E+I++ Sbjct: 122 KASKDLLNEMINEFINALDFGKSMRWASRTD-----SFIRPIRSLIMML-----GEEIVE 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +L + N ++ HR + P Y L++ V+L PE R+ IL+ + S Sbjct: 172 GELYGVKSSNKSFAHRMVSYEPFSFDFAGDYFCKLDKNGVILYPEDRKKIILDQMKDIES 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 L++ D +LLEEI+ + E+ +GSFD+++L LPEE+I ++K +Q+ F +EG Sbjct: 232 QNNLKIDIDPELLEEIVAITEYPTALLGSFDEEFLELPEEVIVTSMKEHQRYFAVY-KEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N FI+VSN + D + IV GN +V+ RL DA+ F+K D NN + LK Sbjct: 291 KLSNNFIVVSNSKTEDF-SFIVAGNEKVLRPRLSDAMFFYKNDLNNGLSNEGLK------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDRAIV 416 ++VF +G+ E+ R + +A++ + + L+ +A++ Sbjct: 344 ------------------NLVFVDGLGSMYEKCEREVKIASYLAEVFEIKEKELLTKAVM 385 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSKADL +E+V EF ELQG +G YA NE+ A++E P G ++P+NK S Sbjct: 386 LSKADLMSEMVYEFTELQGLMGYYYAKAANEDKLVFTALKEQYLPDGEDSDLPSNKFSAI 445 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------- 529 V+L+ KLD L+ +++ + P+GSKDP+ LRRA GI++I +E+K+++ LS I Sbjct: 446 VALSYKLDNLMGLFSVGKIPTGSKDPFGLRRAAAGIVKISMEHKLEVNLSNIIDNLLDTY 505 Query: 530 ---EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + + LI FF++RL D+ +I+A+L ++ I I LN S Sbjct: 506 SGLKKEKLIEFFNERLFKIF---DVNPSVIKAVLGSGEGDIYKISQKICALNPIVLSDDF 562 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 ++ + KR+ I+ + N +L I + EK LY + + Sbjct: 563 KESSTTFKRVANIIKDIDVNN---TLNIDESLFEQDEEKDLYETYTLLINK-----KYNT 614 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + D L S+ ++ FFD V VN +D ++ NR +L+ + + ++++I Sbjct: 615 YEEELDALFSLKPKLDKFFDNVFVNHEDENIKTNRKNLIGLVYQAFRNIADIKEIT 670 >gi|170734064|ref|YP_001766011.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia MC0-3] gi|169817306|gb|ACA91889.1| glycyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia MC0-3] Length = 699 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 339/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + + L +I + +Y TP RL + ++ + +P+K + E+ Sbjct: 19 PPKALARLGDAFAEGIAQRLAARDLIEGELVFERYATPRRLAVVVQNVRAVAPDKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNASIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++++ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFAGVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGAVEPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|206559296|ref|YP_002230057.1| glycyl-tRNA synthetase subunit beta [Burkholderia cenocepacia J2315] gi|198035334|emb|CAR51209.1| putative glycyl-tRNA synthetase beta chain [Burkholderia cenocepacia J2315] Length = 699 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 340/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +P++ + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFINYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ K+P PK M + S ++RP+ + + ++I+ + + Sbjct: 139 LQAALDEALAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRIVPVTAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ +L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPQL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADTAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFNGVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R I+A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEIDAVLSLNPTRIDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|317051556|ref|YP_004112672.1| glycyl-tRNA synthetase subunit beta [Desulfurispirillum indicum S5] gi|316946640|gb|ADU66116.1| glycyl-tRNA synthetase, beta subunit [Desulfurispirillum indicum S5] Length = 693 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 200/732 (27%), Positives = 321/732 (43%), Gaps = 71/732 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M D LLE+ +EEIPA + E + + R TP RL L L+G Sbjct: 1 MSTQDILLELGTEEIPAGFIDDLLLQMERFSAKWFGERNISFATARTMGTPRRLTLILEG 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 ++ +E LGP G +A +GFLRS G SD +K+ KG+ Sbjct: 61 VAVSGYATTQELLGPARNIAYDANGQLTRAGEGFLRSKGFAA-SDAYVKETS-KGEYLAV 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R+ VL I+ + KSM+W + F + RPL+ I + Sbjct: 119 MQRQEAVQTMAVLPQFFEELIRSLSCRKSMQWGSG-----TFRFARPLRHIAAFFGTQA- 172 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +D ++ + G TYGHRF I +Q Y LE V++D RR I Sbjct: 173 ----VDFAMEGLRSGGTTYGHRFLGSREIALQGASSYQTQLEAQQVIVDISRRRAMIQEA 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +A G ++ + L+ LVE+ +G FD+++L LP EL+ +T++ +QK F Sbjct: 229 CDAVAKQHGGRVIGGESLVNLTSHLVEYPVAVVGDFDERFLRLPRELLIVTMREHQKYFA 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L FI +SN+ D ++I +GN RV+ ARL DA ++ D Sbjct: 289 LEDAGGRLLPHFITISNM-PIDDTSSIKRGNERVLRARLSDAEFYYDED----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 L PL R A+LD VVF ++G+ G++V RI + +AQ L ++ Sbjct: 337 ---------LKTPLASRKAQLD--KVVFQEQLGSIGQKVERIAGIADALAQAAGLSESQR 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A + +LSK DL + +V EFPELQG +GKEYA + + + I EH PR + + Sbjct: 386 ADIATLALLSKCDLVSGMVYEFPELQGVMGKEYAAQEGYSETVSRGIMEHWFPRHAGDTL 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P++ + VS+ADK+DT+ + I PS S DPYALRR LGI+ + K+ + L Sbjct: 446 PSSMEAAMVSIADKMDTIAGCFGIGLLPSSSNDPYALRRQALGILHTLSHWKLSVSLDAV 505 Query: 529 IED-----------------QNLILFFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTI 570 I + + F R K++ HD++E++ +++T+ Sbjct: 506 IHMALQRLAKVISRESRQVAEEIANFIIQRSKVFFTTTEGFDHDVVESVFSGRFSDVITV 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ L S + + +R I+ S ++ +E L Sbjct: 566 SRKLQALQSLKSRQDYRSVVETFRRAVNIIPEG------FSGSVNAALFQHASEGELLGR 619 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + + + + + + + ++ FD V+V D VR+NRL+LLQ + Sbjct: 620 LDAVLPQALDCVKKNDFDGVFGIALQLKPHVDKLFDNVMVMDKDVTVRNNRLALLQQVGQ 679 Query: 691 IILIVINVQKIV 702 + V + K+V Sbjct: 680 LFSGVADFSKLV 691 >gi|329117146|ref|ZP_08245863.1| glycine--tRNA ligase, beta subunit [Streptococcus parauberis NCFD 2020] gi|326907551|gb|EGE54465.1| glycine--tRNA ligase, beta subunit [Streptococcus parauberis NCFD 2020] Length = 679 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 198/712 (27%), Positives = 338/712 (47%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + + L E + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVSSSEKQFGEKMAAFLTENRLTFETIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 KA GF+R GL T I+ KG+ Y+ V + + + + Sbjct: 75 SKKIALDAEGDYSKAAQGFVRGKGLTTDD---IEFCEIKGEEYVYVTKHEEGKATEEVLQ 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SM W++ +F +IRP+ ++ +L ++ +D++ +I G Sbjct: 132 GIPQVLASLSFPVSMHWASN-----SFEYIRPVHTLTVLL-----DDQALDMNFLDISSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF + S + Y +DL V+ D R+ I++ H L +++ D Sbjct: 182 RVSRGHRFLGEET-TIASANSYEQDLARVYVIADARERQEMIVHQIHELEIKFNVKVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 EDLLNEVLNLVEFPTAFMGSFDSKYLEVPEEVLVTSMKNHQRYFVVRDQFGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N +++GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGN-DQHIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 + +LD V FH KIG+ + + R V+ +AQ +D D ++ RA + K DL Sbjct: 340 DLVNKLD--QVTFHEKIGSLRDHMKRTGVIADSLAQELDLSSQDSQVLARASQIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L EN AI EH P +P +K ++LADKL Sbjct: 398 TGMVGEFDELQGLMGEKYALLAGENPEVAQAIREHYLPNSAEGELPESKAGAVLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ +IPL Q I Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFHWNIPLDQLIANCYNLPFDSLSYD 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R++ + I D+ EA+L + + +++ ++KG + Sbjct: 518 NQSQVMDFISARIEKMM-GAAIPKDIKEAVLAS---TIFQVPQMLETAQALVEASKGSTY 573 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + + + + + EK E + + + EK LY ++ H + Sbjct: 574 KSAVENLSRAFNLAEKA--EEQVVVDSSLFENDQEKALYQAVNSLDL-------HGNASE 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ + I FFD +V D+ +++ NRL+LL + V + K+ Sbjct: 625 KINQLFALNDYIVNFFDSTMVMSDNAQLKANRLALLVSLVEKAKSVASFNKL 676 >gi|85714237|ref|ZP_01045225.1| glycyl-tRNA synthetase beta subunit [Nitrobacter sp. Nb-311A] gi|85698684|gb|EAQ36553.1| glycyl-tRNA synthetase beta subunit [Nitrobacter sp. Nb-311A] Length = 884 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 252/573 (43%), Positives = 349/573 (60%), Gaps = 59/573 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ KAA+DL ++ L EG++Y+ + + TP RL L + G+ Sbjct: 1 MPDLLLELFSEEIPARMQAKAADDLRRMVTDKLVAEGLVYEGAKAFVTPRRLALTVHGIP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ +ER GP++GA A+ GFL++ GL+++ + +I++DPKKGD Y+A++ KP R Sbjct: 61 ARQPDLKDERKGPKLGAPDAAVQGFLKAAGLKSLEEAKIQRDPKKGDFYVALIEKPGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL +PV ++ PWPK MRW + A +W+RPL SI+ E + ++ ++ Sbjct: 121 IEVLAEFLPVIVRTFPWPKQMRWGERSAKPGALTWVRPLHSIIATFGMETEEPDVVPFEV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ + Y L+ A V+LD R++ IL DA LA A G Sbjct: 181 AGITAGQVTRGHRFMAPDEFSVRRFEDYEAKLQAAKVVLDSARRKDIILADAKELAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR----- 295 EL+ED+ LL+E+ GLVEW V MGSFD+++L +P E+IR TI+ NQKCFV R Sbjct: 241 FELIEDQVLLDEVAGLVEWPVVLMGSFDEEFLSIPGEVIRATIRNNQKCFVVRRSHPLLE 300 Query: 296 --------------------------------EGVLANCFILVSNIQASDGGAAIVQGNS 323 LAN FILV+NI+ASDGG AIV GN Sbjct: 301 GEGRSRSERGEVSITPSRSSPSAQIDLPPQGGGEKLANKFILVANIEASDGGNAIVAGNE 360 Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 RV+ ARL DA F++ D L L+ R+ + + +VFH K+ Sbjct: 361 RVIRARLSDAKFFYETD--------------------LKTKLEDRLPKFE--QIVFHEKL 398 Query: 384 GTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAV 443 GTQ ER++RI L +IA L+ ADV RA L KADL TE+V EFPELQG +GK YA+ Sbjct: 399 GTQAERIARIERLAAEIAPLVGADVEKAKRAARLCKADLLTEVVGEFPELQGLMGKYYAL 458 Query: 444 LQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPY 503 Q E+ S A EEH KP+GP + VP++ +SI V+LADK+DTL+ FWAI+EKP+GSKDPY Sbjct: 459 AQGEDASVAAACEEHYKPQGPTDRVPSDPVSIAVALADKIDTLVGFWAIDEKPTGSKDPY 518 Query: 504 ALRRATLGIIRIILENKIDIPLSQFIEDQNLIL 536 ALRRA LG+IR++LEN+I L+ I+ +++ Sbjct: 519 ALRRAALGVIRLVLENEIRSNLTSIIDMATVLV 551 Score = 162 bits (411), Expect = 2e-37, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%) Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN-REISLEISPQYLLLE 622 D+LL IV ++ L +F + G+ L KR ILAIEEKK+ R L+ Sbjct: 744 QDDLLMIVRRVEALGKFLDTDDGKNLLAGTKRASNILAIEEKKDKRSFDGAPDASLYSLD 803 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 EK L A I + ++ ++ + + + ++ FFD+V VN DD ++R+NRL Sbjct: 804 EEKALAAAIDEAKREASVAVANEDFAAAMSAMAKLRPAVDAFFDKVKVNDDDAKIRENRL 863 Query: 683 SLLQYIKNIILIVINVQKI 701 LL I+ V + +I Sbjct: 864 RLLNEIRAATRTVADFSRI 882 Score = 47.1 bits (111), Expect = 0.011, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 25/41 (60%) Query: 528 FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 F +L+ FF DRLK+ L ++ RHDL++A+ + + L Sbjct: 642 FSISADLLAFFADRLKVQLREQGARHDLVDAVFALSSTSPL 682 >gi|124268564|ref|YP_001022568.1| glycine--tRNA ligase [Methylibium petroleiphilum PM1] gi|124261339|gb|ABM96333.1| Glycine--tRNA ligase [Methylibium petroleiphilum PM1] Length = 705 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 202/735 (27%), Positives = 343/735 (46%), Gaps = 64/735 (8%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLY 55 M D L+E++ EE+P + K E + L LK +G+ + + +P RL + Sbjct: 1 MSDTKNLLVELFVEELPPKALKKLGESFAQTLAESLKAQGLATEHSATTPFASPRRLAAH 60 Query: 56 LKGLSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIK-KDPKKGD 107 + + P +P+K + ++L P G A+ L + G + +++ + K + Sbjct: 61 ISAVLPAAPDKAVSQKLMPVSVGLTADGQPTPALLKKLAALGADASALPRLECRPDGKAE 120 Query: 108 VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSP---ISAFSWIRPLKSILC 164 P ++ L+ + A+ K+P PK M + ++ ++RP ++ Sbjct: 121 ALFFDSLVPGAMLAAGLQKALLEALAKLPIPKLMSYQLETGELPGWASVQFVRPAHGLVA 180 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAM-VLLDPE 222 + A+ ++ + + T+GHRF A P+ +Q DHY + L++ V+ Sbjct: 181 LHGAD-----LVSVAALGLESRRETHGHRFEAQMDPVVLQHADHYAQQLQDQGAVIASFA 235 Query: 223 CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLT 282 R I AS GL ++D LL+E+ LVE V +G F++ +L +P+E + LT Sbjct: 236 ARHGEIARQLQAAASKEGLVPIDDPALLDEVTALVERPNVLLGQFEESFLAVPQECLILT 295 Query: 283 IKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQN 342 +K NQK F G L + F++VSNI D +A+V GN RVV RL DA F+ +D+ Sbjct: 296 MKANQKYFPLLDATGRLTHKFLIVSNISPEDP-SAVVGGNERVVRPRLADAKFFFDQDRR 354 Query: 343 NLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ 402 K L+ R++ LD VV+H K+GTQGERV R+R + + I Sbjct: 355 --------------------KTLEDRVSGLDR--VVYHGKLGTQGERVERVRAIARAIGS 392 Query: 403 LIDADVALVDRAI--VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + + L+KADL T++V EFPELQG +G+ YA AIE+H + Sbjct: 393 QLGGEALAAKADQAARLAKADLLTDMVGEFPELQGTMGRYYAQHDGLGDDIAFAIEDHYR 452 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR + +P N++ V+LADKL+TL+ + I + P+G KDP+ALRR LG+IR++ E Sbjct: 453 PRFAGDELPRNEVGTVVALADKLETLVGLFGIGQLPTGDKDPFALRRHALGVIRMLTEKA 512 Query: 521 IDIPLSQFIEDQ-------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + + + ++ L F DRL L ++ R ++A+L L Sbjct: 513 LPLEVDALLKTALPAFGALIADPSSALAEFIFDRLAGSLREQGYRAQEVDAVLSLRPQRL 572 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + F + + + KR+ IL +K + + ++ L AE L Sbjct: 573 GEVAQRLAAVRAFAALPEAPALAAANKRVGNIL---KKVDGAVEPKVDAALLKEPAEAAL 629 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 ++ + + L ++ P++ FFD V+VN DD +R NRL LL Sbjct: 630 AQALAAVKPAADAAFARGDHAASLQSLAALKAPVDAFFDGVMVNADDPALRANRLGLLAT 689 Query: 688 IKNIILIVINVQKIV 702 + + V ++ K+ Sbjct: 690 LHAAMNRVADLSKLA 704 >gi|315612872|ref|ZP_07887783.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis ATCC 49296] gi|315314982|gb|EFU63023.1| glycyl-tRNA synthetase beta subunit [Streptococcus sanguinis ATCC 49296] Length = 678 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 334/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENHLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQPVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-GVLKSLTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 DRVSRGHRFLGQET-KIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A G +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNAEHLG-NVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSADGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I +++ I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMNELIDSLYNLKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEAASALVEAGKKEDFKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + P E EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGTDT-----VDPALFENEEEKALAEAVESL-------VLSGTAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V D++++R NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMTDNQDIRQNRLAILAQLTKKAAKLARFNQI 675 >gi|15838553|ref|NP_299241.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa 9a5c] gi|11387205|sp|Q9PC26|SYGB_XYLFA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|9107061|gb|AAF84761.1|AE004015_4 glycyl-tRNA synthetase beta chain [Xylella fastidiosa 9a5c] Length = 722 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 198/752 (26%), Positives = 342/752 (45%), Gaps = 92/752 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + ++ L++ G+ + + TP RL + L ++ Sbjct: 7 LLIELGTEELPVNALPNLSRAFFEGVLAGLEKRGIVVDHGEAKSLSTPRRLAVLLTAVAV 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP + G KA++GF G+ + +I+ KG+ ++ + Sbjct: 67 EQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRDT--KGERFVHRVV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L I+ AI +P PK MRW + + RP+ ++ +L + Sbjct: 125 VPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVHWLVMLLGQD----- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I+ + Sbjct: 175 VVEAEIMGVKAGRISRGHRFLYDKPVSLSDPQNYIDVLQAAYVLVDPAARRARIVAEIEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 VARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI+++D A + +G RV+ R DA F+ D Sbjct: 295 SLGKLTEKFIGIANIESND-VAEVAKGYERVIRPRFSDAKFFFNED-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L RL V +HAK+GT ++V+R+ VL + IA I D L R Sbjct: 340 ------LKQGLKAMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDPLLARRV 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + + + Sbjct: 392 ALLSKNDLQSRMVNEFPELQGIAGHHYALISGELPEVAMAIEDAYRPRFSGDEIARSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R ++E++ D+ L ++ Sbjct: 452 KVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTMIESRFDLDLKVLLDQASD 511 Query: 532 ------------------------------------------QNLILFFHDRLKLYLHDR 549 + L F +RL+ Y D+ Sbjct: 512 WVAFATTIEQERHAQESVKQSKKEAAVKHSVPQVSDEKSARIEELYDFIVERLRGYYADK 571 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 I A+ + +L + + F + + E ++ KRI IL E K Sbjct: 572 GIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNILRKAEIK--- 628 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I + AE L + T + ++D K Y + L + PI+ FFD+V+ Sbjct: 629 IPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDKVM 688 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN ++ +R NRL+LLQ + + V ++ + Sbjct: 689 VNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|77408169|ref|ZP_00784914.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] gi|77173184|gb|EAO76308.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] Length = 679 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 199/710 (28%), Positives = 336/710 (47%), Gaps = 74/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + ++ +P +M W+ +F +IRP+ +++ +L ++ ++LD +I G Sbjct: 132 SVTEVLTELTFPVNMHWANN-----SFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + D Sbjct: 182 RISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKLN--------------------IA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E + R++V+ + +A L D + V RA + K DL Sbjct: 340 DLVEKLK--QVTFHEKIGSLYEHMDRVKVISQHLADKAGLSDEEKLAVLRAASIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P +I ++LADK Sbjct: 398 TGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRIGAILALADKF 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYA 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + + + D+ EA+L + + I ++ +K ++ Sbjct: 518 NQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLI---LEASQALVQKSKDAQY 573 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 +S + + + + EK +S + EK LY I + H Sbjct: 574 KVSVESLSRAFNLAEKVTHSVS--VDSSLFENNQEKALYQAILSLEL-------TEDMHD 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D L ++ I FFD +V DD +++ NRL+LL + V Sbjct: 625 NLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFN 674 >gi|313890643|ref|ZP_07824270.1| glycine--tRNA ligase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313120954|gb|EFR44066.1| glycine--tRNA ligase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 679 Score = 656 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 205/710 (28%), Positives = 341/710 (48%), Gaps = 74/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L+ + Y+ ++ + TP RL + + GL+ + +E+ GP Sbjct: 15 PAYVVTASEKQLGQKMATFLEANRLSYERIQTFSTPRRLAVRVHGLTDQQEDLVEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T I+ KG+ Y+ V + K + Sbjct: 75 SKKIALDAQGNFTKAAQGFVRGKGLTTDD---IEFRKIKGEEYVYVTKNEKGKAAQEVLM 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SM W++ +F +IRP+ ++ +L + ++++ +I Sbjct: 132 GIPDLLASLTFPVSMHWASN-----SFEYIRPVHTLTVLL-----DDHLLEMPFLDISSA 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 + GHRF I +Q+ Y DL V++DP R+ ILN L +++ D Sbjct: 182 RYSRGHRFLGKE-IAIQNALSYEADLRTQSVIVDPLERQQMILNQIKELEKEHHIQVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ F+G+FD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFLGTFDTKYLSVPEEVLVTSMKNHQRYFVVRDQSGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNAQ-YIENVIKGNEKVLIARLEDGEFFWREDQKL--------------------KIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L+ DV FH KIG+ + + R V+ +A+ + + V+RA + K DL Sbjct: 340 DLVAKLE--DVTFHEKIGSLAQHMERTGVIANYLAEKANLSAEESKAVERASQIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ S AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGVMGEKYALLAGEDPSVATAIREHYLPSSADGTLPETKVGAILALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI DIP+ Q Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRIFEAFGWDIPMDQLIANCYQLSFADFSYT 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + I D+ EA+L + + ++ + L ++ + Sbjct: 518 HQEEVMTFIAARIEKMM-GSSIPKDIREAVLASTHYQVPEMLATAQALVAASKTSHYKVA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + + R+F + A + + I+P + EK LY I D ++ HK Sbjct: 577 VENLSRVFNLAAK-----VDTEVTINPNIFENQEEKELYQAIVDL--QLEGHAAHK---- 625 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + L ++ + I FFD +V +DRE+R+NRL+LL + V Sbjct: 626 -LEQLFALTDKIAAFFDHTMVMAEDREIRNNRLALLTELVEKAETVAQFN 674 >gi|28198746|ref|NP_779060.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa Temecula1] gi|182681438|ref|YP_001829598.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa M23] gi|32130155|sp|Q87D45|SYGB_XYLFT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238691036|sp|B2I4M9|SYGB_XYLF2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28056837|gb|AAO28709.1| glycyl-tRNA synthetase beta chain [Xylella fastidiosa Temecula1] gi|182631548|gb|ACB92324.1| glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa M23] gi|307579888|gb|ADN63857.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa subsp. fastidiosa GB514] Length = 722 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 198/752 (26%), Positives = 340/752 (45%), Gaps = 92/752 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + ++ L+ G+ + + TP RL + L ++ Sbjct: 7 LLIELGTEELPVNALPNLSRAFFEGVLAGLERRGIVVDHGEAKSLSTPRRLAVLLTAVAV 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP + G KA++GF G+ + +I+ KG+ ++ + Sbjct: 67 EQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRDT--KGERFVHRVV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L I+ AI +P PK MRW + + RP+ ++ + + Sbjct: 125 VPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVHWLVMLFGQD----- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I+ + Sbjct: 175 VVEAEIMGVKAGRISRGHRFLYDKPVSLSGPQNYIDVLQAAYVLVDPAARRARIVAEIEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 VARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI+++D A + +G RV+ R DA F+ D Sbjct: 295 SLGKLTEKFIGIANIESND-VAEVAKGYERVIRPRFSDAKFFFNED-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L RL V +HAK+GT ++V+R+ VL + IA I D L R Sbjct: 340 ------LKQGLKAMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDPLLARRV 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + + + Sbjct: 392 ALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIEDAYRPRFSGDEIARSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R I+E++ D+ L ++ Sbjct: 452 KVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTIIESRFDLDLKVLLDQASD 511 Query: 532 ------------------------------------------QNLILFFHDRLKLYLHDR 549 + L F +RL+ Y D+ Sbjct: 512 WVAFATTIEQERHAQESVKQSKKEAAVKHSVPQVSDEKSARIEELYDFIVERLRGYYADK 571 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 I A+ + +L + + F + + E ++ KRI IL E K Sbjct: 572 GIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNILRKAEIK--- 628 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I + AE L + T + ++D K Y + L + PI+ FFD+V+ Sbjct: 629 IPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDKVM 688 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN ++ +R NRL+LLQ + + V ++ + Sbjct: 689 VNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|312797215|ref|YP_004030137.1| glycyl-tRNA synthetase beta chain [Burkholderia rhizoxinica HKI 454] gi|312168990|emb|CBW75993.1| Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) [Burkholderia rhizoxinica HKI 454] Length = 700 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 199/719 (27%), Positives = 336/719 (46%), Gaps = 66/719 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVI------YQNMRQYWTPHRLFLYLKGLSPHSPEK- 66 P + + + + L+ L +I + + TP RL + ++ + +P++ Sbjct: 17 PPKALARLSNAFANGLVERLAARDLIDVADGGSPSFEPFGTPRRLAVTIRNVRAVAPQRQ 76 Query: 67 IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRL 119 + E++ P G + L + G + Q+++ K + + P Sbjct: 77 VREKVLPVSVALDANGQPSAPLAKKLAALGFPDMPLTQLERAMDGKTEAFFLNYAAPGVT 136 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 +ED L+ + + K+P PK M + + ++RP ++ + ++I+ + Sbjct: 137 LEDGLQAALDETLAKLPIPKVMTYQRPDG--TNVQFVRPAHRLVAL-----HADRIVPVS 189 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASA 238 + +T GHRF + + + Y R LE+ V+ + R+ AI L A Sbjct: 190 ALGLDADAVTLGHRFLSEGHVAILHAHDYARTLEQRGKVIASMQARKEAIRAQL--LERA 247 Query: 239 VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 ++ + LL+E+ LVEW V+ FD +L +P+E + LT++TNQK F G Sbjct: 248 GADHVLMPEALLDEVNALVEWPIVYECRFDDAFLQVPQECLILTMQTNQKYFALTDAGGK 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN+Q D IV GN RVV RL DA F+++DQ Sbjct: 308 LRSRFLVVSNVQT-DTPQQIVLGNERVVRPRLADAKFFFEQDQK---------------- 350 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 K L+QR+ L +VV+H K+G+Q +RV R+ L IA + D RA L+ Sbjct: 351 ----KTLEQRVPLL--ANVVYHNKLGSQLQRVERLEALAAVIAPSVGVDAQRAARAARLA 404 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T++V EFPELQG +G YA E A EH +PR + +P+ IS V+ Sbjct: 405 KADLLTDMVGEFPELQGTMGTYYARHDGEPDDIALACSEHYRPRFAGDALPSTAISTAVA 464 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-- 536 LADKL+TL+ W I +P+G KDP+ALRR LG++RI+LE ++ + L + Sbjct: 465 LADKLETLVGIWGIGLQPTGEKDPFALRRHALGVLRIVLEKQLPLDLIDLLRHAYAQFAA 524 Query: 537 -------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 FF DRL+ L +R + ++A+L + I + + EF + Sbjct: 525 QPQVADPTSALHGFFIDRLRGLLRERGYDANEVDAVLSQNPTRIDDITGRLDAVREFATL 584 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KRI IL KK+ + + + L+ AE+ L+ + + +Q + Sbjct: 585 PEAASLAAANKRITNIL----KKSDGAAQHVETKLLMEPAERALFEQLHNVTPTVQGRLS 640 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + Y L S+ + ++ FF+ V+VN DD +R NRL LL + ++ V ++ K+ Sbjct: 641 SRDYTGALSALASLRDAVDTFFNDVMVNADDAALRANRLGLLARLHELMHCVADISKLA 699 >gi|254522505|ref|ZP_05134560.1| glycyl-tRNA synthetase, beta subunit [Stenotrophomonas sp. SKA14] gi|219720096|gb|EED38621.1| glycyl-tRNA synthetase, beta subunit [Stenotrophomonas sp. SKA14] Length = 691 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 199/723 (27%), Positives = 334/723 (46%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLYLKGL 59 L+E+ +EE+P + A+ ++ L++ G + + R TP RL + L G+ Sbjct: 5 SPLLIELGTEELPVKALPGLAQAFFDGVVDGLRKRGVALDLGDARPLSTPRRLAVLLPGV 64 Query: 60 SPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 PE+ E LGP G KA+ GF G++ + K KG+ ++ Sbjct: 65 GLEQPEQHSEVLGPYLNIALDAEGQPTKALQGFAAKAGIEWTALE--KTTDNKGERFVHR 122 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P +L I+ AI +P PK MRW A+ + RP ++ + Sbjct: 123 AVTPGASTASLLPEILREAIAAMPIPKPMRWGDH-----AWGFARPAHWLVLL-----HG 172 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + +++ +L + G ++ GHRFH + + Y+ L A VL+DP RR I+ + Sbjct: 173 DNVVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVLVDPSERRARIVAEV 232 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+ G +D LE+++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 233 EAAAAKAGGSARITEDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQKFFPV 292 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI ++NI++ D A + +G RV+ R DA F+ D Sbjct: 293 LDDSGTLTEKFIGIANIESKD-VAEVAKGYERVIRPRFADAKFFFDED------------ 339 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L + L L V + AK+G+ ++V+R+ L + IA + AD A Sbjct: 340 --------LKQGLASMGEGLKT--VTYQAKLGSVADKVARVAALAEVIAPQVGADAAQAK 389 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+K DL + +V EFPELQG G+ YAV E++ AI+E +PR +++ + Sbjct: 390 RAAELAKNDLQSRMVNEFPELQGIAGRHYAVAGGESVDVALAIDEAYQPRFGGDDIALSA 449 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + +++A+++DTL +A KP+G+KDP+ALRR LG+ R I+E+ ++ L + Sbjct: 450 LGKVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRALLASA 509 Query: 533 NL--------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N F DRLK Y D+ + A+ + +L + + Sbjct: 510 NAGLAARNVQADVGELYDFILDRLKGYYADKGVPATHFNAVAELKPASLYDFDRRLDAIG 569 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KRI IL E +I +I L +AE+ L ++ Sbjct: 570 TFAALPEAEALAAANKRIRNILRKAE---GDIPAQIDTALLQEDAERALAEAVTAAIDDT 626 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 S+ HK Y + L + ++ FFD V+VN +D +R NRL+LL + + V + Sbjct: 627 GASLQHKDYVAVLARLARLRPQVDAFFDGVMVNAEDPALRGNRLALLTMLGERLGKVAAI 686 Query: 699 QKI 701 + + Sbjct: 687 EHL 689 >gi|71275842|ref|ZP_00652126.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Dixon] gi|71899338|ref|ZP_00681498.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|170730175|ref|YP_001775608.1| glycyl-tRNA synthetase subunit beta [Xylella fastidiosa M12] gi|238688047|sp|B0U7B2|SYGB_XYLFM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71163420|gb|EAO13138.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Dixon] gi|71730852|gb|EAO32923.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|167964968|gb|ACA11978.1| Glycine--tRNA ligase [Xylella fastidiosa M12] Length = 722 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 198/752 (26%), Positives = 340/752 (45%), Gaps = 92/752 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + ++ L+ G+ + + TP RL + L ++ Sbjct: 7 LLIELGTEELPVNALPSLSRAFFEGVLAGLERRGIVIDHGEAKSLSTPRRLAVLLTAVAV 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP + G KA++GF G+ + +I+ KG+ ++ + Sbjct: 67 EQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRDT--KGERFVHRVV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L I+ AI +P PK MRW + + RP+ ++ + + Sbjct: 125 VPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVHWLVMLFGQD----- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I+ + Sbjct: 175 VVEAEIMGVKAGRISRGHRFLYDKPVSLSDPQNYIDVLQAAYVLVDPAARRARIVAEIEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 VARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI+++D A + +G RV+ R DA F+ D Sbjct: 295 SLGKLTEKFIGIANIESND-VAEVAKGYERVIRPRFSDAKFFFNED-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L RL V +HAK+GT ++V+R+ VL + IA I D L R Sbjct: 340 ------LKQGLKAMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDPLLARRV 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + + + Sbjct: 392 ALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIEDAYRPRFSGDEIARSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R I+E++ D+ L ++ Sbjct: 452 KVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTIIESRFDLDLKVLLDQASD 511 Query: 532 ------------------------------------------QNLILFFHDRLKLYLHDR 549 + L F +RL+ Y D+ Sbjct: 512 WVAFATTIEQERHAQESVKQSKKEAAVKHSLPQVSDEKSARIEELYDFIVERLRGYYADK 571 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 I A+ + +L + + F + + E ++ KRI IL E K Sbjct: 572 GIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNILRKAEIK--- 628 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I + AE L + T + ++D K Y + L + PI+ FFD+V+ Sbjct: 629 IPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDKVM 688 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN ++ +R NRL+LLQ + + V ++ + Sbjct: 689 VNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|116491024|ref|YP_810568.1| glycyl-tRNA synthetase, beta subunit [Oenococcus oeni PSU-1] gi|122276794|sp|Q04F69|SYGB_OENOB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116091749|gb|ABJ56903.1| glycyl-tRNA synthetase beta chain [Oenococcus oeni PSU-1] Length = 689 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 208/736 (28%), Positives = 350/736 (47%), Gaps = 83/736 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D+LLEI EEIPA + ++ L + + + Y+ ++ + TP RL + + LS Sbjct: 1 MADYLLEIGLEEIPAHLVTESENQLIERIKNFFSDNLLDYKKIQTFSTPRRLAVLVHDLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +S K EE GP + G +A +GF RS G D + G VYL Sbjct: 61 NYSQSKDEELRGPSLKVAKDESGNWSRAAEGFARSQGTSPAE-----FDERDGYVYL-NK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++LK I ++K+ + M+W+ ++RP++ ++ +L + Sbjct: 115 HIEGVSAEEILKKIGIEVVEKMKFSTYMKWADFK-----LEYVRPIRWLVSLLDS----- 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 KI+ + ++ T GHRF + I + Y L A V++D + R+N+I N Sbjct: 165 KIVPFQILDVKADRFTRGHRFLSGGKISISEAGDYEETLNNAYVIVDAKVRKNSIRNQIR 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A L D DLLEE+ +VE+ F G FD KYL LPE ++ +++ NQ+ F Sbjct: 225 KIADTNDWNLHVDPDLLEEVNNIVEYPTAFAGVFDDKYLNLPEIVLTTSMRDNQRFFYVT 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + FI V N + + +V+GN +V+ ARLEDA F++ DQ + + K Sbjct: 285 NKQGKILPHFISVRNGDS-NQIENVVKGNEKVLVARLEDAEFFFEEDQKHNIDFFMKKAE 343 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 L VFH KIGT E + R+ + +A + D + Sbjct: 344 RL----------------------VFHEKIGTMTEHMKRVEKIAALLANQLAFNDQEKKD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG + YA + EN + C A+ E P ++P Sbjct: 382 LKRAANICKFDLTTAMVGEFAELQGTMAGIYAKIFGENQTVCQALSEQYLPTSSEGDLPK 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +K+ ++LADKLDTL +F+A PSGS DPY LRRA LGI+RII + K + +S+ + Sbjct: 442 SKVGAMLALADKLDTLFSFFAAGIIPSGSNDPYGLRRAALGIVRIIGQQKWNFSVSKLLH 501 Query: 531 -----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +I FF DR++ DIR+DL++A N+ + Sbjct: 502 SLKTAVDKHEDGFLIDFADTKEISRKVIEFFLDRIRQ--QSSDIRYDLLDASTGKVNEGI 559 Query: 568 LT-IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + I ++ L + + + R+ + + ++EI P+ + +EKR Sbjct: 560 INYIFKRVRILASHVADPDFRDVIEALTRVQNLAEKNKS-----NVEIDPELFVTNSEKR 614 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY + D + + H + L S+ EPI +FD+ ++ + +++NR++ + Sbjct: 615 LYQLTKDKDPIV--LLSKGD-HTVYQFLASLKEPINNYFDENMIMDKNPIIKNNRVAQIN 671 Query: 687 YIKNIILIVINVQKIV 702 + N+I + +++K+V Sbjct: 672 LLNNLISSLGDLRKVV 687 >gi|295398005|ref|ZP_06808061.1| glycyl-tRNA synthetase beta subunit [Aerococcus viridans ATCC 11563] gi|294973763|gb|EFG49534.1| glycyl-tRNA synthetase beta subunit [Aerococcus viridans ATCC 11563] Length = 692 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 201/734 (27%), Positives = 346/734 (47%), Gaps = 78/734 (10%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M FL EI EE+PA+ A L ++ L + + + N+ + TP RL + + G Sbjct: 1 MSQHTFLFEIGLEEVPAQYVRNAVNQLKSLVENFLSDNRLTFDNVETFATPRRLTVRVNG 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ + E GP G KA GF R G I + KG+ Y+ Sbjct: 61 LADKQTDFSEVAKGPAKRIAQDEEGNWTKAAQGFARGKGASVED---IYFEEVKGEEYVF 117 Query: 112 V-LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + + +P D+L+ +V I ++ +P SM W++ +IRP+ ++ +L Sbjct: 118 INISQPGSQAADILQDVV-SVIDQMSFPVSMHWASYD-----VKYIRPIHWMVALL---- 167 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++++ L + NI+ GHR+ + + + Y L + V++ + R+ I Sbjct: 168 -DDQVLPLTFLNLTASNISRGHRYLGSQEVVIVDANAYEAALADEFVIVKQDERKALIEQ 226 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +LAS ++ D DLLEE+ +VE+ F+G+FD KYL LP+E++ ++K +Q+ F Sbjct: 227 QIEQLASENKYQIDIDADLLEEVTQIVEYPTAFIGNFDDKYLALPDEVLITSMKNHQRYF 286 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + G L F+ V N A + + +GN +V+ ARLED F D+ Sbjct: 287 YVKDQAGKLLPLFLAVRNGNA-EHLDNVRKGNQKVLTARLEDGFFFVNEDK--------- 336 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 +K + RL V FHA+IG+ E+++R + K +A+ +A Sbjct: 337 -----------TKTIQDFQDRL--AKVTFHAEIGSLQEKMARTGQIAKYLAEKWSGQLAD 383 Query: 411 VD-----RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 V R + K DL T IV EF ELQG +G++YA+ E + AI EH P Sbjct: 384 VQTGDITRTGEIYKFDLMTGIVDEFSELQGIMGEKYALAFGEAPAVATAIREHYMPISAE 443 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +P +++ +++DKLD++I+F+ I+ PSGS DP+ALRR T GI+RI++EN++ Sbjct: 444 GELPASQLGKLFAVSDKLDSVISFFNIDRIPSGSNDPFALRRQTSGIVRILIENELTFDW 503 Query: 526 -----------------SQFIEDQNLI-LFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +E Q + F +DRLK L+D++IR+D+ +A+L+ + ++ Sbjct: 504 KTDIISILQTVYGIEDQERLVELQTALSQFVNDRLKAILNDQEIRYDIADAVLQSHSADV 563 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 L + K L A ++ L + RI + A + N + + I ++E L Sbjct: 564 LRKLAASKVLQAASEKASFKETLEAWNRILNLGAKARELNVQ-DVTIEESRFESDSEVAL 622 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + + L ++ I FFD +V +D+ V++NRL++L Sbjct: 623 FNAAKGLEM-------TNDMQNNYNQLEALTPVITEFFDNNMVFAEDQTVQNNRLAILSM 675 Query: 688 IKNIILIVINVQKI 701 I IL + + +I Sbjct: 676 IAQAILTLADTNRI 689 >gi|307705200|ref|ZP_07642070.1| glycyl-tRNA synthetase beta chain [Streptococcus mitis SK597] gi|307621222|gb|EFO00289.1| glycyl-tRNA synthetase beta chain [Streptococcus mitis SK597] Length = 678 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 197/712 (27%), Positives = 328/712 (46%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I G Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLLDEEE-----FDLDFLDIKGG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGQET-KIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIEAEHGVHIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ D V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQIAVLLAEKADLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGETPAVATAIREHYMPTSAEGELPETKVGAILAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALTFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEASKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E+ + P E EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEEV-----ATVDPALFENEEEKTLAEAVESL-------VLSGTASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V + VR NRL++L ++ + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAESEAVRQNRLAILSHLTQKASKLARFNQI 675 >gi|319788543|ref|YP_004148018.1| glycyl-tRNA synthetase subunit beta [Pseudoxanthomonas suwonensis 11-1] gi|317467055|gb|ADV28787.1| glycyl-tRNA synthetase, beta subunit [Pseudoxanthomonas suwonensis 11-1] Length = 724 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 196/754 (25%), Positives = 336/754 (44%), Gaps = 94/754 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ--NMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ GV R +TP RL + L G++ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVVAALQKRGVAVDATGARPLYTPRRLAVLLPGVAV 66 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 PE+ E LGP G +A++GF G++ + + KG+ ++ Sbjct: 67 EQPEQHSEVLGPYLNIALDAEGKPTRALEGFAAKAGVEWTALE--RTSDAKGERFVHRSV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 KP ++L +V AI +P PK MRW +++ RP+ ++ +L + Sbjct: 125 KPGARTAELLPEVVSEAIAGMPVPKPMRWGGHD-----YAFARPVHWLVLLL-----GNE 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + + G + GHRF ++ + YI L A VL+DP RR I+ A + Sbjct: 175 VVPAQVLGVASGRSSRGHRFEHDQAVEFAAPGDYIEALRAARVLVDPAERRARIVEQAEQ 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ G +D LE+++ L EW + SF++ +L +P+E + T++ NQK F Sbjct: 235 AAARAGGSARITEDNLEQVVCLTEWPAAVLCSFERDFLAVPQEALIETMEINQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI +NI++ D A + +G RV+ R DA F+ D LK+ Sbjct: 295 AAGKLTEYFIGTANIESRD-VAEVSKGYERVIRPRFADARFFFDED---------LKQGL 344 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L V + AK+GT ++V+R+ L + IA + AD A RA Sbjct: 345 VAMGEGLKT-------------VTYQAKLGTVADKVARVAALAEAIAPQVGADPAQARRA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL + +V EFPELQG G+ YA+ E AI+E PR + + ++++ Sbjct: 392 AELAKNDLQSRMVNEFPELQGIAGRHYALAAGEPQEVALAIDEAYMPRFSGDAIASSRLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ-- 532 +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ ++ L + +E Sbjct: 452 QVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTLIESGFELDLLRLLEASLA 511 Query: 533 ---------------------------------------------NLILFFHDRLKLYLH 547 L F DRL+ Y Sbjct: 512 RIQHHIQLVQDNQAIAAIKSAQASGIETNKKLPPKQPVDIEALGPELYDFILDRLRGYYA 571 Query: 548 DRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKN 607 D+ + A+ + +L + I + F + + + + KRI IL +K + Sbjct: 572 DKGVPAAHFNAVAELKPASLADLDTRIAAIGTFAALPEADALAAANKRIGNIL---KKAD 628 Query: 608 REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQ 667 I P +AE+ L + + Y ++ + L + ++ FFDQ Sbjct: 629 IAIPAMEDPALFAEDAERALGEAVEAALGDTDGPLQQHDYVRVLERLARVRPQVDAFFDQ 688 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+VN +D VR NRL+LL+ + + V + + Sbjct: 689 VMVNAEDPAVRGNRLALLKRLADRFGAVAAIGHL 722 >gi|23099403|ref|NP_692869.1| glycine-tRNA ligase beta chain [Oceanobacillus iheyensis HTE831] gi|81846059|sp|Q8EPY2|SYGB_OCEIH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|22777632|dbj|BAC13904.1| glycine-tRNA ligase beta chain [Oceanobacillus iheyensis HTE831] Length = 692 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 205/730 (28%), Positives = 348/730 (47%), Gaps = 73/730 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L+EI EE+PAR A L L+E + +N+ Y TP RL +++K + Sbjct: 1 MARDVLIEIGLEELPARFIDDAELQLYTKTKQWLEENRISSENVISYSTPRRLAVFVKNM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E+ GP + G KA GF + GL T I KG Y+ V Sbjct: 61 AEKQSSIEEDVKGPALKIAKDEDGNWTKAAQGFTKGQGLTTDD---IVVREVKGISYIYV 117 Query: 113 LRK-PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + R I+++L I+ + + K+MRW + + RP++ ++ ++ Sbjct: 118 TKHIEGRPIQELLPE-FKSIIESITFGKNMRWGS-----ETIRYARPIRWLVAMM----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++I ++ + N+TYGHRF + +Q Y + L++ V++ + R I+ Sbjct: 167 GNEVIPFEIAHVATNNVTYGHRFLGEE-VTIQEPAEYEKTLKDNYVIVKAKDRETLIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 +L G E+ D++LLEE+ LVE+ F+G F++ YL +P E++ ++K +Q+ F Sbjct: 226 LSKLEREHGFEIPVDQELLEEVRNLVEFPTAFVGKFEEAYLEIPPEVLITSMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++GVL F+ V N + + +GN +V+ ARL DA F+ D Sbjct: 286 VH-KKGVLQPYFVGVRNGD-NYHIETVAKGNEKVLRARLADAEFFYNED----------- 332 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L + +D +L VVF K+GT ++V R++ + +I++ + D Sbjct: 333 ---------LHQSIDFFQEKL--TKVVFQEKLGTYSDKVERMKQIADRISEKLSLESDDR 381 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 +++RA +SK DL T +V EF ELQG IG++YA EN + AI+EH +P+ +++ Sbjct: 382 KIIERAAEISKFDLMTSMVNEFTELQGIIGEKYANHFGENSATSQAIKEHYQPKHAKDDL 441 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P I VS+ADKLDT+ A+ P+GS+DPY LRR I+RI+ K ++ + + Sbjct: 442 PQTVIGSVVSVADKLDTIAGCIAVGLVPTGSQDPYGLRRQASAILRILHNEKWNLTVEEL 501 Query: 529 IE-----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 I+ ++ LI FF R + D+ + D+I A+ + N+ Sbjct: 502 IDIALDVFQKSNVTIMEKTNEELIEFFRLRAVYLMKDKGLEVDVIHAVTDQKLGNVFVSF 561 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + K L++ + + + R+ + E I L E+EK LY Sbjct: 562 EKAKELSDKRNDETFKPIQEALVRVLNLSNKVETNEL-----IREDKLETESEKILYTRY 616 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 D ++ + H Q L + PI FFD +V DD E+R+NRL+L+Q + ++ Sbjct: 617 LDIKETYEKQLLHNETKQALATLAQLAAPIHAFFDNNMVMADDLEIRNNRLALIQALTSL 676 Query: 692 ILIVINVQKI 701 IL +++KI Sbjct: 677 ILPYADLRKI 686 >gi|94968224|ref|YP_590272.1| glycine--tRNA ligase, beta subunit [Candidatus Koribacter versatilis Ellin345] gi|94550274|gb|ABF40198.1| glycyl-tRNA synthetase beta chain [Candidatus Koribacter versatilis Ellin345] Length = 729 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 217/758 (28%), Positives = 342/758 (45%), Gaps = 89/758 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ-NMRQYWTPHRLFLYLKGL 59 M DFLLEI +EEIPARM A E+L+ + L++ E + ++ Y TP RL + K L Sbjct: 1 MADFLLEIGTEEIPARMIDSAREELAKRVSDLVQRERLAEGVHVESYSTPRRLAVVAKSL 60 Query: 60 SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ E+ +GP G A F + G+ + ++ KG+ A + Sbjct: 61 RTSQPDVEEQLMGPSTKVAYKDGEPTPAAHAFAKKAGVDLNAIEKVST--PKGEYIAATV 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R ++L ++P I V W KSM W + + ++RP++ ++ +L Sbjct: 119 ARKGRSASEILSELLPKEINGVYWAKSMYWRPGKT---SERFVRPVRWMVALL-----DN 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ L+ + GN + GHR + + + HY L A V++D + R I Sbjct: 171 DVVPLEFDGVTAGNRSRGHRILSHGVVTLPDPSHYRDTLAAAAVVVDRKDREYKIRKALD 230 Query: 234 RLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + G EDKDLL+ ++ L E +GSFD +YL LPEE++ ++ +QK F Sbjct: 231 AATRTITGARWREDKDLLDTVVNLTESPSALLGSFDPEYLSLPEEVLVTVMRDHQKYFAV 290 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G LA F+ V N D I GN RV+ AR DA FW DQ Sbjct: 291 EDAGGKLAPHFLAVLNTNG-DPDGLIRHGNERVLRARFNDARFFWNTDQKLD-------- 341 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-----IDAD 407 L QR+ L V F +G+ ++ R + L IA++ I Sbjct: 342 ------------LRQRVELLK--SVTFQKDLGSYYDKTCRFQKLASLIAEVAMQAGITVR 387 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNE----NISCCDAI----EEHL 459 +V +A +LSK DL TE+V+EF ELQG +G YA Q E N +AI +H Sbjct: 388 AGVVHKAALLSKTDLTTELVKEFTELQGVVGGLYAKAQGERLDCNQEVANAIGDVVYDHY 447 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 KP ++VP + V++ADK DT+ +A+ PSGSKDP+ALRRA G+++II E+ Sbjct: 448 KPVSMDDSVPRSIEGAIVAVADKADTIAGMFALGLIPSGSKDPFALRRAANGVVKIIAEH 507 Query: 520 KIDIPLSQFIED---------------------QNLILFFHDRLKLYLHD-RDIRHDLIE 557 K+ I L +D +N+ F +RL YL + + +D++ Sbjct: 508 KLPISLRTTFDDARTEYKGSEAELRFAADDKCTENIAAFMRERLDFYLREVKGFHYDVVN 567 Query: 558 AILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI------- 610 A+L D+++ + + + S + KR+ IL E+K Sbjct: 568 AVLASNADDVVDAIARAEAVTAVRGSEDFIAVSAAFKRMKNILKQAEEKKVHPLMNLGED 627 Query: 611 ------SLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 +E + E L D +Q ++ K Y + L+ + +P++ F Sbjct: 628 VASVRFKMEEYEKRAEHPEEAALIRAFMDVSPRVQAAVQLKSYQEAVSLVAGLRKPVDAF 687 Query: 665 FDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 FD+V+V VDD + R RL LL I + I+ + +IV Sbjct: 688 FDKVMVMVDDEQKRTARLLLLLAIVSQFEIIADFSEIV 725 >gi|76787186|ref|YP_328994.1| glycyl-tRNA synthetase subunit beta [Streptococcus agalactiae A909] gi|77404951|ref|ZP_00782052.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] gi|77410621|ref|ZP_00786981.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae CJB111] gi|123758113|sp|Q3K3A9|SYGB_STRA1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|76562243|gb|ABA44827.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae A909] gi|77163336|gb|EAO74287.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae CJB111] gi|77176390|gb|EAO79158.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] Length = 679 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 199/710 (28%), Positives = 336/710 (47%), Gaps = 74/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + ++ +P +M W+ +F +IRP+ +++ +L ++ ++LD +I G Sbjct: 132 SVTEVLTELTFPVNMHWANN-----SFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + D Sbjct: 182 RISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKLN--------------------IA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 340 DLVEKLK--QVTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 398 TGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADKF 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYA 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 518 NQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKVS 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + S+ + EK LY I + H Sbjct: 577 VESLSRAFNLAEK-----VTHSVLVDSSLFENNQEKALYQAILSLEL-------TEDMHD 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D L ++ I FFD +V DD +++ NRL+LL + V Sbjct: 625 NLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFN 674 >gi|327399084|ref|YP_004339953.1| glycyl-tRNA synthetase subunit beta [Hippea maritima DSM 10411] gi|327181713|gb|AEA33894.1| Glycyl-tRNA synthetase beta subunit [Hippea maritima DSM 10411] Length = 670 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 209/713 (29%), Positives = 357/713 (50%), Gaps = 66/713 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L E+++EE+P +D +L ++ + + N+ Y TP R+ L + Sbjct: 3 LLFELFTEELPTSEMEHLEKDFLEASKKILSDKNIEFNNLIFYLTPRRMALKFE-FDEFV 61 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + ++ LGP G KA++GFL+ D +++ KKG+ +++ Sbjct: 62 KVEDKKVLGPPKSVCFKDGKPTKALEGFLKKNNATM--DDIVEEKTKKGEYIAVIIKGKN 119 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++ + ++ + + K MRW F + RP+ ++ + +I+D Sbjct: 120 VQAKPIVIQAIDQILKDIHFNKQMRWGDGE-----FEFTRPVHGVVFL-----IDNEIVD 169 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + K N TYGHRF + +V+ D+Y L+E V+++ RR ILN A+ Sbjct: 170 FEFKGKKASNTTYGHRFLSSGSFRVE-YDNYESTLKENFVIVNQNERRQLILNQLKEYAN 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G +LV D++LL E++ LVE+ + +G F++K+L LP+E++ ++K +Q+ F T++G Sbjct: 229 KKGAKLVYDEELLNEVVNLVEYPVMVIGRFEEKFLKLPKEVLITSMKDHQRYFA-FTKDG 287 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F +SNI+ D I +G RV+ AR DA F++ D+ + Sbjct: 288 KLLNEFAAISNIKT-DNMDLIREGYERVLRARFSDAEFFFEEDKKH-------------- 332 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVL 417 L++ + +L ++FH K+G+Q +R +R+ L + +A+ + D RA L Sbjct: 333 ------KLEEFVPKLS--QMMFHEKLGSQLDRTNRLVGLAEFLAEKLGFDTNKAKRAAYL 384 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 SKADL T++V EFPELQG +G+EYA+L +E+ AI E P+ + +P I + Sbjct: 385 SKADLLTQMVYEFPELQGVMGREYALLSSEDSEVATAIYEQYLPK--EDEIPRGGAGICL 442 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI-- 535 S+ADKLD ++ + KP+G+KDPY LRRA LGIIR ++EN + + L + +E + Sbjct: 443 SIADKLDIIVGGFFAGLKPTGAKDPYGLRRAALGIIRTLIENGLFLNLREVLEKSAQLYN 502 Query: 536 ---------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 FF R K Y D HD++EA + + D++ +K LNEF S K Sbjct: 503 KTIELYEIEEFFAVRFKNYFSD--YPHDVLEA-ITFKFDDIYDAYLRLKALNEFVESDKN 559 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 ++ + KR+F IL E + + E+ L+ + E + K Sbjct: 560 KEKQFAIKRVFNILKEFE------GSRVDESLFNQDEERALFDKVKQLEEVEAEFISKKD 613 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + + + S + I+ FFD V+V D +VR+NRLSLL ++ I+L + N + Sbjct: 614 YLGLLNQITSNKDVIDNFFDSVMVMDKDEKVRNNRLSLLNKLRKIVLNIANFK 666 >gi|294085843|ref|YP_003552603.1| glycyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292665418|gb|ADE40519.1| Glycyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 703 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 235/730 (32%), Positives = 371/730 (50%), Gaps = 58/730 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMR----QYWTPHRLFLYL 56 M D +E+ SE+IPARMQ KA DL ++ L + G+ Y + L LY+ Sbjct: 1 MADLFIELVSEDIPARMQVKACADLQRLVYAGLDDLGLGYTKADDTDACLVSSRHLALYV 60 Query: 57 KGLSPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 G+ ++I E+ GPRV A ++AI+GFL STGL D +++D KG A Sbjct: 61 VGVDDRQADRIVEKRGPRVDAPEQAINGFLASTGLT--RDQLVEEDTPKGRFLFARSESK 118 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA--EDAKEK 174 D+L +++ + PWPKS RW T S F W+RPL I + D Sbjct: 119 GAQTADLLASMIAGILNSFPWPKSQRWGT-----SRFRWVRPLHRINVLFGGKRLDGALA 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQ---SLDHYIRDLEEAMVLLDPECRRNAILND 231 + D I G+ + GH F +P + + + Y+ L++A VL++ R +++ Sbjct: 174 LGGDDDAAIAFGDKSCGHFFESPGDVDLDGLKNAQDYLGRLKKAHVLVNHNERIQTVMDQ 233 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A +LA+ +G + + E LVEW + +G + +++ LP E+++ +I+T+QK Sbjct: 234 ARKLAADMGCSVKSGDAQIAETANLVEWPNLLVGKIEDRFMQLPAEVLQSSIQTHQKYIT 293 Query: 292 TRT-REGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +G ++ FI+V+N A +++ GN RV+ ARL DA FW +D+ Sbjct: 294 LEHISDGSMSPHFIIVANRIADHVRDDVIKAGNQRVLRARLADAEFFWTQDK-------- 345 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DV 408 ++ L+ + +L D+ F+ +G+ ++ RI L IA ID D+ Sbjct: 346 ------------ARTLEDYLPQL--TDITFYDGLGSVHDKARRIEKLAGDIAPFIDGCDL 391 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA +L+KADL T +V EFPELQG +G YA+ E+ A+ H +P+GP + V Sbjct: 392 AKAQRAGLLAKADLVTGMVGEFPELQGIMGGYYAIAAGEDDDIAAAVASHYRPQGPQDAV 451 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P ++TVSLADK+DTL+ F+ KP+GSKDPYALRRA LG+I IILE+ IPL++ Sbjct: 452 PALPEAMTVSLADKIDTLVGFFGAGAKPTGSKDPYALRRAALGVIAIILESHTRIPLAKI 511 Query: 529 IEDQNLIL-----------FFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKH 576 F +RL++ L D+++ HD+ ++L+ D++L + D Sbjct: 512 FAKAAAYHGFDHVDDALLPFLRERLRVSLLDQNVAHDVAASVLQTATTDDVLLLADTAHA 571 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEE-KKNREISLEISPQYLLLEAEKRLYAVISDF- 634 L F ++ G L +R ILA EE K++R + I P + +AE+ L + I Sbjct: 572 LAIFLATEDGVGLLAGWRRAASILAAEESKEDRVFAPTIDPNLFVHDAERGLMSAIDILG 631 Query: 635 ---GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 E D + Q L + PI+ FF +V+VN DD +R+NRL LL I++ Sbjct: 632 SHDADEQTEIPDKAQLLQQMQALGQLRTPIDHFFTEVVVNDDDPAIRENRLGLLALIRSH 691 Query: 692 ILIVINVQKI 701 + + + KI Sbjct: 692 MQNIADFSKI 701 >gi|188574648|ref|YP_001911577.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519100|gb|ACD57045.1| glycyl-tRNA synthetase, beta subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 745 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 191/781 (24%), Positives = 331/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++I +L + IT GHRF + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GNEVIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSACISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+GT ++V+R+ L + IA + AD Sbjct: 348 GD----------------------GLASVTYQAKLGTVADKVARVAALAEVIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI++ +PR +++ Sbjct: 386 LQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDQAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L++ Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLTEL 505 Query: 529 IED------------------------------------------------QNLILFFHD 540 ++ ++ F D Sbjct: 506 LKKAVGLVNSALAWSQASKQQTAVEAAKVQGVHVAERQSGGLWVPNVEATSAEILDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAILR--------------------PENDNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ + +L I + F Sbjct: 566 RLRGYYADKGVPATHFNAVAALFSGTSEAVTAPTGVGAHPGATHGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEAQALAAANKRIRNILR---KVEGEIPGDIDTALLREPAEEALAEAVEAAIGATGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|254251460|ref|ZP_04944778.1| Glycyl-tRNA synthetase beta subunit [Burkholderia dolosa AUO158] gi|124894069|gb|EAY67949.1| Glycyl-tRNA synthetase beta subunit [Burkholderia dolosa AUO158] Length = 699 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 198/715 (27%), Positives = 342/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +P++ + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G ++ ++++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGFPNLTVAELERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ R+ I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRKETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+ ERV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSTLERVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEADDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFANVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFIDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|319744263|gb|EFV96628.1| glycyl-tRNA synthetase beta subunit [Streptococcus agalactiae ATCC 13813] Length = 679 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 196/710 (27%), Positives = 336/710 (47%), Gaps = 74/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 KA GF+R GL I+ KG+ Y+ + + + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYITKHETGKSAIDVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + ++ +P +M W+ +F +IRP+ +++ +L ++ ++LD +I G Sbjct: 132 SVTEVLAELTFPVNMHWANN-----SFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I++ H + + + D Sbjct: 182 RISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNAG-HIENVIKGNEKVLVARLEDGEFFWQEDQKLN--------------------IA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 340 DLVEKLK--QVTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 398 TGMVDEFDELQGIMGEKYALLAGEKPAVAAAIREHYMPTSADGELPETRVGAILALADKF 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYA 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + + + D+ EA+L + + I ++ +K ++ Sbjct: 518 NQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLI---LEASQALVQKSKDAQY 573 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 +S + + + + EK +S + EK LY I + H Sbjct: 574 KVSVESLSRAFNLAEKVTHSVS--VDSSLFENNQEKALYQAILSLEL-------TEDMHD 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D L ++ I FFD +V DD +++ NRL+LL + V Sbjct: 625 NLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFN 674 >gi|94272282|ref|ZP_01292098.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] gi|93450178|gb|EAT01487.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] Length = 694 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 221/727 (30%), Positives = 345/727 (47%), Gaps = 68/727 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L EI SEEIPA A L L L E + + + TP RL + ++ Sbjct: 1 MSARELLFEIGSEEIPAGYIKPALIALQNGLARGLAERELTHGQLYTAATPRRLTVAVQD 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ PE+ EE LGP G +A GF S GL T+ QI+ P KGD A Sbjct: 61 LAASQPERQEEVLGPAKKAAFDEAGNPTRAATGFAASRGL-TVEQLQIRSTP-KGDYLAA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V ++ R ++L ++P I +P+PKSMRW + RPL+ +L + + Sbjct: 119 VTQRRGRQTAELLSELLPELILSLPFPKSMRWGAGK-----IHFARPLRWLLAVYDGQP- 172 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +D L +P GN + GHRF AP + + S + Y+ L +A VL D + RR A++ Sbjct: 173 ----LDFTLDGLPAGNRSRGHRFMAPQALTITSYEQYLEQLRQASVLADLDERRQAVVAG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A A G ++ D +L+ + LVE GSFD+++L LP E++ +++ +QK F Sbjct: 229 VEQAAQATGGRVLADPELVATVTNLVESPHALAGSFDQRFLQLPREVLITSLREHQKYFA 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F+ V+N + D + QG+ RV+ ARLEDAL F+ DQ + Sbjct: 289 VVDEQGRLLPRFVAVNNTRVRDPQLGV-QGHQRVLRARLEDALFFFNEDQQH-------- 339 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-L 410 PL + L V+F AK+G+ + R++ L ++++ D Sbjct: 340 ------------PLSELAGNL--HGVIFQAKLGSMAHKSGRLQELAGRLSREFAPDEEET 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA L KADL T +V EFP LQG IG++YA Q E + +AI H P +P Sbjct: 386 VTRAAHLCKADLLTNMVGEFPSLQGVIGRDYARRQGEPEAVAEAIHSHYLPLRAGGELPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 ++ + +AD+LDTL + I K +G+ DP+ LRR LG+I ++L ++I +PL+ +++ Sbjct: 446 DRAGAILGIADRLDTLAGCFGIGLKTTGAADPFGLRRQALGLIHLLLGHQIPLPLTPWLK 505 Query: 531 DQNLI-----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + F R L + + +EA+L + D L Sbjct: 506 QALALYADRLSDDPDTTAGRLRDFIRHRFANDLTRQGLPAAAVEAVLSVDGDELNDAKRR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ L + KR+ I+ K NR+ I P L+ AEK+L A ++ Sbjct: 566 IEALVAASGRESFTLLAGAFKRVNNII----KDNRDTR--IDPDLLIEPAEKKLAAALAK 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y Q + + + EP++ FFDQV+V + E+R NRL+LL + + L Sbjct: 620 ITAGTAPLLAAGNYQQALEEILEMKEPVDAFFDQVMVMAKEEELRRNRLALLTAVARLFL 679 Query: 694 IVINVQK 700 V + K Sbjct: 680 RVGDFSK 686 >gi|71897929|ref|ZP_00680134.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|71732173|gb|EAO34228.1| Glycyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] Length = 722 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 198/752 (26%), Positives = 339/752 (45%), Gaps = 92/752 (12%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGV--IYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + ++ L+ G+ + + TP RL + L ++ Sbjct: 7 LLIELGTEELPVNALPNLSRAFFEGVLAGLERRGIVVDHGEAKSLSTPRRLAVLLTAVAV 66 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP + G KA++GF G+ + +I+ KG+ ++ + Sbjct: 67 EQPKQYRELFGPYLNTAFDTEGKPTKALEGFAAKCGVNWRTLERIRDT--KGERFVHRVV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P + +L I+ AI +P PK MRW + + RP+ ++ + + Sbjct: 125 VPGERTDALLPGILTEAIAGMPIPKPMRWGAHE-----YLFARPVHWLVMLFGQD----- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ ++ + G I+ GHRF P+ + +YI L+ A VL+DP RR I+ + Sbjct: 175 VVQAEIMGVKAGRISRGHRFLYDKPVSLSGPQNYIDVLQAAYVLVDPAARRARIVAEIEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A VG +D + +++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 VARQVGGVARITEDNVAQVVNLVEWPSAVLCSFERVFLEVPQEALIQTMEVNQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI+++D A + +G RV+ R DA F+ D Sbjct: 295 SLGKLTEKFIGIANIESND-VAEVAKGYERVIRPRFSDAKFFFNED-------------- 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 L + L RL V +HAK+GT ++V+R+ VL + IA I D L R Sbjct: 340 ------LKQGLKVMGERLRT--VTYHAKLGTLADKVARVLVLAEAIAPQIGVDPLLARRV 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +LSK DL + +V EFPELQG G YA++ E AIE+ +PR + + + + Sbjct: 392 ALLSKNDLQSRMVNEFPELQGVAGHHYALISGELPEVAMAIEDAYRPRFSGDEIARSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED--- 531 + LA++LDTL +A+ KP+G+KDP+ LRR LG+ R I+E++ D+ L ++ Sbjct: 452 KVLGLAERLDTLACGFAVGMKPTGNKDPFGLRRNALGLARTIIESRFDLDLKVLLDQASD 511 Query: 532 ------------------------------------------QNLILFFHDRLKLYLHDR 549 + L F +RL+ Y D+ Sbjct: 512 WVAFATTIEQERHAQESVKQSKKEAAVKHSVPQVSDEKSARIEELYDFIVERLRGYYADK 571 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 I A+ + +L + + F + + E ++ KRI IL E K Sbjct: 572 GIPTTHFNAVAELKPVSLYDFHRRLDAIGRFAALPEAEALAVANKRIRNILRKAEIK--- 628 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 I + AE L + T + ++D K Y + L + PI+ FFD+V+ Sbjct: 629 IPASVDATLFDQPAESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDKVM 688 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 VN ++ +R NRL+LLQ + + V ++ + Sbjct: 689 VNDENLMLRANRLALLQRLGEYLCCVAAIEHL 720 >gi|331266701|ref|YP_004326331.1| glycyl-tRNA synthetase beta subunit [Streptococcus oralis Uo5] gi|326683373|emb|CBZ00991.1| glycyl-tRNA synthetase beta subunit [Streptococcus oralis Uo5] Length = 678 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 332/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKTAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL IK KG+ Y+ V ++ + +E+++ Sbjct: 75 AKKIALDGDGNFTKAAQGFVRGKGLTVED---IKFREIKGEEYVYVTKEEVGQPVENIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVD-VLKSLTFPVSMHWANN-----TFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL V++DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGQET-KIQSALSYEEDLRAQFVIVDPREREQMIVDQIKAIEAEHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEIPAVAAAIREHYMPTAAEGELPESKVGAILAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + ++++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLASSNFVVADMLEVASALVEASKKEDFKS 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + E EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGSD-----AVDSALFENEEEKALAEAVESL-------VLSGTAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + L ++ I+ FF+ +V +D+ VR NRL++L + + +I Sbjct: 623 QQLEQLFALSPVIDAFFENTMVMAEDQTVRQNRLAILSQLTKKAAKLARFNQI 675 >gi|58584021|ref|YP_203037.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428615|gb|AAW77652.1| glycyl-tRNA synthetase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] Length = 745 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 191/781 (24%), Positives = 331/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++I +L + IT GHRF + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GNEVIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+GT ++V+R+ L + IA + AD Sbjct: 348 GD----------------------GLASVTYQAKLGTVADKVARVAALAEVIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI++ +PR +++ Sbjct: 386 LQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDQAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L++ Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLTEL 505 Query: 529 IED------------------------------------------------QNLILFFHD 540 ++ ++ F D Sbjct: 506 LKKAVGLVNSALAWSQASKQQTAVEAAKVQGVHVAERQSGGLWVPNVEATSAEILDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAILR--------------------PENDNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ + +L I + F Sbjct: 566 RLRGYYADKGVPATHFNAVAALFSGTSEAVTAPTGVGAHPGATHGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEAQALAAANKRIRNILR---KVEGEIPGDIDTALLREPAEEALAEAVEAAIGATGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|307702019|ref|ZP_07639027.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis NCTC 12261] gi|307616664|gb|EFN95853.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis NCTC 12261] Length = 678 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 326/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQADLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWANN-----TFEYIRPVHTLTVLLDEEE-----FDLDFLDIKGD 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGQET-KIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIETEHGVHIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A D +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-DHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALTFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEASKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + + EK L + + Q Sbjct: 576 VESLSRAFNLADKAEGV-----VAVDSALFENDQEKALAEAVESL-------VLSGTASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L ++ + +I Sbjct: 624 QLKQLFALSPVIDSFFENTMVMAEDQAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|239817704|ref|YP_002946614.1| glycyl-tRNA synthetase, subunit beta [Variovorax paradoxus S110] gi|239804281|gb|ACS21348.1| glycyl-tRNA synthetase, beta subunit [Variovorax paradoxus S110] Length = 712 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 210/738 (28%), Positives = 346/738 (46%), Gaps = 69/738 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--YQNMRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K + + +L L +G+ + Y +P RL +L + Sbjct: 6 KNLLVELFVEELPPKALKKLGDAFAGVLRDQLVAQGLAEPASVLTAYASPRRLAAHLTHV 65 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLA 111 + + +K + ++L P G A+ L + G + +K+ K + Sbjct: 66 AERAADKAVSQKLMPVAVGLDASGQPTPALLKRLAALGADASAVPGLKRAMDGKAEALFY 125 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRW----STTHSPISAFSWIRPLKSILCILV 167 + + L+ + AI K+P PK M + S+ S++RP ++ + Sbjct: 126 ESTAKGATLAEGLQKALAEAIAKLPIPKVMSYQLESGCELPGWSSVSFVRPAHGLVAL-- 183 Query: 168 AEDAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRR 225 + ++ ++ + G T+GHRF A P+ ++ + Y ++ E V+ E RR Sbjct: 184 ---HGDAVVPVEALGLQAGRETHGHRFEAAVDPVVLRDANSYALQMQDEGAVIASFEARR 240 Query: 226 NAILNDAHRLASAVGLE--LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 I A VG + D LL+E+ LVE V + SF++++L +P+E + LT+ Sbjct: 241 TEIARQLAAAAVRVGGAAVPIHDDALLDEVTALVERPNVLVCSFEREFLEVPQECLILTM 300 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 K NQK F L N F++VSNI D +A+V GN RVV RL DA F+ +D+ Sbjct: 301 KANQKYFPLLDASNRLTNKFLVVSNISPEDA-SAVVGGNERVVRPRLADAKFFFDQDRK- 358 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K L R+ L VV+H K+GTQGERV R+ + + IA+ Sbjct: 359 -------------------KSLASRVESLG--KVVYHNKLGTQGERVERVMRIARGIAEK 397 Query: 404 IDADV--ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + A +A L+KADL T++V EFPELQG +G+ YA+ DAIE+H KP Sbjct: 398 LGGAALVAHAVQAAQLAKADLVTDMVGEFPELQGTMGRYYALHDGLAAEVADAIEDHYKP 457 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R + +P N + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E + Sbjct: 458 RFAGDELPRNSVGLVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLIEKDL 517 Query: 522 DIPLSQFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 + L ++D L F DRL L ++ ++A+L P Sbjct: 518 PLKLDALLQDAAAQFKDIDGFDTGKATAELQDFILDRLAGSLREQGASAQEVDAVLAPRP 577 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 L + L+ + F + + KRI IL KK E +S L AE Sbjct: 578 QRLGEVPKLLAAVRAFAALPAAAALAAANKRIGNIL----KKAPEADAHVSELLLKEPAE 633 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K L+A +++ D Y L ++ EP++ FFD V+VN + ++R NRL L Sbjct: 634 KALHAAMAEVVPAANAQFDAGDYTASLQTLAALREPVDAFFDGVMVNAEQADLRLNRLGL 693 Query: 685 LQYIKNIILIVINVQKIV 702 L + + V ++++ Sbjct: 694 LMSLHAAMNRVAQLERLA 711 >gi|19703422|ref|NP_602984.1| glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25009299|sp|Q8RH44|SYGB_FUSNN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|19713496|gb|AAL94283.1| Glycyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 686 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 200/728 (27%), Positives = 349/728 (47%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKSNFEKKLKNNRIKFDGVRTYGTPRRLVLVADEVAGM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKDGALTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFLK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + + KSMRWST + RP++ L + K+I Sbjct: 120 GKPTEAILPEILKALVLEETFQKSMRWSTK-----TIRFARPIEWFLALYGG-----KVI 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S+++Y++ + E V++D RR I + Sbjct: 170 DFEIEGIKSSNKSKGHRFFGKE-FEVSSVENYLKKIRENNVIIDISERRKMIEEMINNSL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DK LL+E+ LVE +G+F +++L +P+E++ +++K +Q+ F ++ Sbjct: 229 LEDE-KADVDKALLDEVTNLVEHPFAIVGTFSEEFLEVPQEVLIISMKVHQRYFPILNKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT +V R + + + + + + R Sbjct: 330 ----LKIPLDNNVEKLKT--VVFQKDLGTIYNKVKRCEKIAEFLVGKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D+I A+L ++DN+ T +++ Sbjct: 504 LDALEEDKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDVILAVLDKDSDNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K + E S K + L KR+ I+ + + I + + EK LYA Sbjct: 564 VKVITEKLSKDKMQALLQVVKRVSNIMKGNK------DVTIKEKLFKTDIEKTLYAESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + +++++ K Y + L ++ I+ +F+ V+V +D+ VRDNR+ L YI N+ Sbjct: 618 VESEVEQAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIGQLTYIMNLFE 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 KIAYLNKL 685 >gi|212696011|ref|ZP_03304139.1| hypothetical protein ANHYDRO_00547 [Anaerococcus hydrogenalis DSM 7454] gi|212676998|gb|EEB36605.1| hypothetical protein ANHYDRO_00547 [Anaerococcus hydrogenalis DSM 7454] Length = 689 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 215/732 (29%), Positives = 362/732 (49%), Gaps = 74/732 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE P+ + + L L++E + + ++ TP R + L GL Sbjct: 1 MSKYLLEIGVEEFPSAYINSTKKQLEEKFKKLIEENKLSLEEIKVESTPRRFAILLDGLE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E++ GP G KA+ GFLR + KG+ Y+ V Sbjct: 61 ENKSEELVSVKGPSKKIAYDNEGNPSKALLGFLRGQKADISD---VIIKDFKGEEYVYVE 117 Query: 114 RKPKRL-IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K + I++VL+ + ++ + +P+SMRW + + RP++ L +L Sbjct: 118 KKEESPSIKEVLQKNIYELVKSLNFPRSMRWGGR-----SIRFARPIRYFLSLL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+D D + I N T GHR I V +D Y+ L+E V+L + RR IL Sbjct: 168 DEILDFDAEGIKVSNTTKGHRVLGKSEIVVDKIDSYLDLLKENFVILSYKERREIILRGL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +R A +G + ++D+DLLEE+I +VE+ V MG D +YL LP+E+I +K +Q+ F Sbjct: 228 NRYAKEIGGKFLKDEDLLEEVINIVEYPTVLMGELDHEYLKLPKEVIITPMKDHQRYFPI 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L F+LV N ++ GN +V+ ARLEDA F+ D N Sbjct: 288 VDDNENLMPYFLLVRNGD-DYAKENVISGNKKVLTARLEDAKFFYDIDNN---------- 336 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL 410 K L++ + +LD L F +G+ ++ R+ L K + + DV+ Sbjct: 337 ----------KKLEEYVDQLDRL--TFFEGLGSMKQKTERLISLSKNYLEEFKLGEDVSD 384 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSKADL T++V EF ELQG +G+ YA ENI +AIEE KPR +++P Sbjct: 385 NLLRAAYLSKADLVTKMVIEFTELQGTMGRIYATNSGENIQVANAIEEAYKPRSSEDSLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +S+ADK+DT+ + I + +GS+DP+ LRR+ +G+I II + KID+ + + Sbjct: 445 KSVAGIVLSIADKIDTITGHYIIEDYVTGSQDPFGLRRSAIGVINIIADKKIDVDIKDLV 504 Query: 530 ED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 +D + + FF DRLK ++D+ R+DL+ A+L N+L++ Sbjct: 505 KDSLFVYTEKNELSFDYNQTLEKITEFFIDRLKNMMNDKGYRYDLVNAVLNTGESNVLSV 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ +K L EF E+ L RI + ++++ + L E++ Y Sbjct: 565 IEKVKALEEFVKRDDSEEILNYFTRINNFTKDFDL------IDVNVEKLDEGLERQYYDC 618 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 I++ + ++ + K Y + + + S + + D ++ VDD E+++NRL+LL + Sbjct: 619 INNLES--EKYLSQKLYQKALEEIASTRQIGNDYLDNTMIMVDDEEIKNNRLALLNKLAK 676 Query: 691 IILIVINVQKIV 702 I V N++ +V Sbjct: 677 DISRVFNIKDLV 688 >gi|94264056|ref|ZP_01287856.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] gi|93455567|gb|EAT05754.1| Glycine--tRNA ligase [delta proteobacterium MLMS-1] Length = 694 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 221/727 (30%), Positives = 345/727 (47%), Gaps = 68/727 (9%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + L EI SEEIPA A L L L E + + + TP RL + ++ Sbjct: 1 MSARELLFEIGSEEIPAGYIKPALIALQNGLARGLAERELTHGQLYTAATPRRLTVAVQD 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ PE+ EE LGP G +A GF S GL T+ QI+ P KGD A Sbjct: 61 LAAGQPERQEEVLGPAKKAAFDEAGNPTRAATGFAASRGL-TVEQLQIRSTP-KGDYLAA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V ++ R ++L ++P I +P+PKSMRW + RPL+ +L + + Sbjct: 119 VTQRRGRQTAELLSELLPELILSLPFPKSMRWGAGK-----IHFARPLRWLLAVYDGQP- 172 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +D L +P GN + GHRF AP + + S + Y+ L +A VL D + RR A++ Sbjct: 173 ----LDFTLDGLPAGNRSRGHRFMAPQALTITSYEQYLEQLRQASVLADLDERRQAVVAG 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A A G ++ D +L+ + LVE GSFD+++L LP E++ +++ +QK F Sbjct: 229 VEQAAQATGGRVLADPELVATVTNLVESPHALAGSFDQRFLQLPREVLITSLREHQKYFA 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G L F+ V+N + D + QG+ RV+ ARLEDAL F+ DQ + Sbjct: 289 VVDEQGRLLPRFVAVNNTRVRDPQLGV-QGHQRVLRARLEDALFFFNEDQQH-------- 339 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-L 410 PL + L V+F AK+G+ + R++ L ++++ D Sbjct: 340 ------------PLSELAGNL--HGVIFQAKLGSMAHKSGRLQELAGRLSREFAPDEEET 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA L KADL T +V EFP LQG IG++YA Q E + +AI H P +P Sbjct: 386 VTRAAHLCKADLLTNMVGEFPSLQGVIGRDYARRQGEPEAVAEAIHSHYLPLRAGGELPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 ++ + +AD+LDTL + I K +G+ DP+ LRR LG+I ++L ++I +PL+ +++ Sbjct: 446 DRAGAILGIADRLDTLAGCFGIGLKTTGAADPFGLRRQALGLIHLLLGHQIPLPLTPWLK 505 Query: 531 DQNLI-----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + F R L + + +EA+L + D L Sbjct: 506 QALALYADRLSDDPDTTAGRLRDFIRHRFANDLTRQGLPAAAVEAVLSVDGDELNDAKRR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I+ L + KR+ I+ K NR+ I P L+ AEK+L A ++ Sbjct: 566 IEALVAASGRESFTLLAGAFKRVNNII----KDNRDTR--IDPDLLIEPAEKKLAAALAK 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + Y Q + + + EP++ FFDQV+V + E+R NRL+LL + + L Sbjct: 620 ITAGTAPLLAAGNYQQALEEILEMKEPVDAFFDQVMVMAKEEELRRNRLALLTAVARLFL 679 Query: 694 IVINVQK 700 V + K Sbjct: 680 RVGDFSK 686 >gi|84625799|ref|YP_453171.1| glycyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369739|dbj|BAE70897.1| glycyl-tRNA synthetase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 745 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 191/781 (24%), Positives = 331/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPDLAQAFFDGVLSGLEKRGIAVTRGAAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGGHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++I +L + IT GHRF + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GNEVIPAELLGVRGDRITRGHRFMHEGAVSLAVPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEASAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+GT ++V+R+ L + IA + AD Sbjct: 348 GD----------------------GLASVTYQAKLGTVADKVARVAALAEVIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI++ +PR +++ Sbjct: 386 LQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDQAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L++ Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLTEL 505 Query: 529 IED------------------------------------------------QNLILFFHD 540 ++ ++ F D Sbjct: 506 LKKAVGLVNSALAWSQASKQQTAVEAAKVQGVHVAERQSGGLWVPNVEATSAEILDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAILR--------------------PENDNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ + +L I + F Sbjct: 566 RLRGYYADKGVPATHFNAVAALFSGTSEAVTAPTGVGAHPGATHGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEAQALAAANKRIRNILR---KVEGEIPGDIDTALLREPAEEALAEAVEAAIGATGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|34497111|ref|NP_901326.1| glycyl-tRNA synthetase subunit beta [Chromobacterium violaceum ATCC 12472] gi|34102968|gb|AAQ59332.1| glycyl-tRNA synthetase, beta chain [Chromobacterium violaceum ATCC 12472] Length = 686 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 217/711 (30%), Positives = 345/711 (48%), Gaps = 62/711 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMR--QYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + A + + LK+ + + Y +P RL + L G+ P++ R Sbjct: 15 PPKALPRLAASFAQTITEELKKMQFVAADAAAVTYASPRRLAVQLPGVLAVQPDQHITRQ 74 Query: 72 GPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLK 125 GP G A+ GF RS G++ + + K DVY KP + L Sbjct: 75 GPAAAAGMKDGQPTPALAGFARSCGVEVSELSIV--NNGKQDVYAYSSTKPGEALSAQLA 132 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V +A++K+P PK MRW + ++RP+ ++ + +K+I ++ + Sbjct: 133 EVVSLALKKLPVPKLMRWGDSD-----VQFVRPVHGLIML-----HGDKVIAGEVLGLNS 182 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELV 244 GN T GHRF + + V + D Y R + E+ V+ + RR I + A+ +G + Sbjct: 183 GNATRGHRFLSQGEVVVANADAYARVMHEQGKVIASFDARRELIRHKLAEAAAKLGATIA 242 Query: 245 EDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFI 304 +L +E+ LVEW V F+ ++L +P+E + LT++ NQK F R G L N F+ Sbjct: 243 APDELFDEVTALVEWPVVLEAGFEAEFLQVPQECLILTMQQNQKYFPLLDRNGKLMNRFL 302 Query: 305 LVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKP 364 LVSN++ +D + IV GN RV+ ARL DA F+++D+ + Sbjct: 303 LVSNVETADP-SFIVGGNERVLRARLSDAKFFFEQDKKH--------------------R 341 Query: 365 LDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCT 424 LD R+ RL +VV+H KIGTQ ERV R++ + IA + AD AL RA L+KADL T Sbjct: 342 LDSRLPRL--ANVVYHNKIGTQLERVERLQSIAGAIAHQLGADAALAARAAYLAKADLVT 399 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 ++V EFPELQG +G YA E+ A+E H PR + +P KI+ V+LADKL+ Sbjct: 400 DMVGEFPELQGIMGMYYAQHDGEHAEVAAAVEGHYHPRFAGDTLPEGKIATAVALADKLE 459 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI-----------PLSQFIEDQN 533 ++ W I P+G KDP+ALRRA LG++R+ LE +D+ P + + Sbjct: 460 AIVGIWGIGLIPTGDKDPFALRRAALGVVRMALEADLDLKPLLAIVAEAFPAGKLSANVA 519 Query: 534 LIL--FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 + F DRLK +L D + D I+A+L L + ++ + F S + Sbjct: 520 DEVFGFMMDRLKNFL-AADYKGDEIDAVLALSPSRLNEVRAVLAAVAAFKSLPEAAALAA 578 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR+ IL E + + L AE+ LYA + D ++ + Sbjct: 579 ANKRVNNILKKAEGEIG----AVDAALLQEAAEQALYAAVRDLAPAVEVKFAAHDFSGAL 634 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L S+ P++ FFD V+V +D VR NR++LL + + V ++ + Sbjct: 635 SQLASLKAPVDAFFDGVMVMAEDARVRANRIALLASLAALFNRVADISLLA 685 >gi|307709292|ref|ZP_07645750.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK564] gi|307619875|gb|EFN98993.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK564] Length = 678 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 325/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I G Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLLDEEE-----FDLDFLDIKGG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRRQFVIADPREREQMIVDQIKEIEAKHGVSIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLDVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDTFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKSEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEASKKEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + E EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENEEEKTLAEAVESL-------VLSGTASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V ++ VR NRL++L ++ + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAENEAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|76798315|ref|ZP_00780561.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 18RS21] gi|76586345|gb|EAO62857.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 18RS21] Length = 679 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 200/710 (28%), Positives = 337/710 (47%), Gaps = 74/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQIFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + ++ +P +M W+ +F +IRP+ +++ +L ++ ++LD +I G Sbjct: 132 SVTEVLTELTFPVNMHWANN-----SFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + D Sbjct: 182 RISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKLN--------------------IA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 340 DLVEKLK--QVTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 398 TGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADKF 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYA 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 518 NQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKVS 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + S+ + EK LY I + H Sbjct: 577 VESLSRAFNLAEK-----VTHSVLVDSSLFENNQEKALYQAILSLEL-------TEDMHD 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D L ++ I FFD +V DD +++ NRL+LL + V Sbjct: 625 NLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFN 674 >gi|55738463|gb|AAV62104.1| glycyl-tRNA synthetase beta subunit [Streptococcus thermophilus CNRZ1066] Length = 714 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 200/712 (28%), Positives = 334/712 (46%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 51 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 110 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 111 SKKIALDADGNFSKAAQGFVRGKGLTIDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 167 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SM W+ +F +IRP+ +++ +L ++ ++LD I G Sbjct: 168 GIPEVLASLTFPVSMHWANN-----SFEYIRPVHTLIVLL-----GDEALELDFLGIKSG 217 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ + Sbjct: 218 RVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQIE 276 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI V Sbjct: 277 EGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFISV 336 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +V+GN +V+ ARLED FW+ DQ ++ Sbjct: 337 RNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 375 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 376 DLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDLL 433 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 434 TGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADKL 493 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 494 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSYD 553 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 554 NQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKAA 611 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+ + + EK L + S K Sbjct: 612 VESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQAAESL--ELTGSASDK---- 660 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 661 -LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 711 >gi|296110365|ref|YP_003620746.1| glycyl-tRNA synthetase beta chain [Leuconostoc kimchii IMSNU 11154] gi|295831896|gb|ADG39777.1| glycyl-tRNA synthetase beta chain [Leuconostoc kimchii IMSNU 11154] Length = 686 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 202/731 (27%), Positives = 339/731 (46%), Gaps = 76/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + ++ + TP RL L ++ Sbjct: 1 MSTFLLEIGLEEMPAHLVTSSEAQLIERTKAFLAEHRLSVGEIKPFSTPRRLAFQLVDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G + ++G V+L Sbjct: 61 LESESLSEEKRGPAINRAKDEQGGWSKAAQGFARGQGATPED-----FEEREGYVWLTK- 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P +L I + ++ + M+W+ +F ++RP++ ++ +L E Sbjct: 115 HTPGEAAATILAKIGDEVVSQMKFTTYMKWANN-----SFLYVRPIRWLVALL-----DE 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 I+D + E+ G T GHRF + +++ + Y+ L+ A VL+D E R++ I Sbjct: 165 AIVDFSILEVSTGRFTRGHRFLSHEHVEISHANRYVDTLKAAYVLVDAEGRKSEIRRQLE 224 Query: 234 RLASAVGLELVED----KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+ L D ++LLEE+ +VEW F GSFD+KYL +P+ ++ +++ +Q+ Sbjct: 225 MIATQNHWLLQLDVDAAQNLLEEVNNIVEWPTAFSGSFDQKYLEVPDAVLMTSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + G L F+ V N A + + ++ GN +V+ ARLEDA F+ DQ Sbjct: 285 FYVTDQSGALLPNFLSVRNGNAEN-LSNVIAGNEKVLVARLEDAEFFYHEDQQ------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 K + MA++ L VFH KIGT E + R+ L +A ++ D Sbjct: 337 -------------KTIADSMAKVKKL--VFHEKIGTVYEHMQRVGKLAADLAASLNFDDS 381 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A + RA + K DL T +V EF ELQG +G+ YA L EN + AI+EH P Sbjct: 382 KKADLARASEIYKFDLMTGMVGEFDELQGIMGEHYAKLFGENAAVAVAIKEHYMPTSAHG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL- 525 +V T + +++ADKLD +I F++ N P+GS DPY LRRA GI+R + K + L Sbjct: 442 DVATTDVGAVLAIADKLDAIITFFSANLMPTGSNDPYGLRRAATGIVRTLENKKWHVALK 501 Query: 526 -------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIV 571 +Q + ++ F DR++ DR IR D++ A + +++ I Sbjct: 502 PVLDVFVTNTGEVTQNADLTAVLAFIFDRVRKIALDRGIRQDIVSAGTALVGSTDVVYIA 561 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D + L + + + S R+ ++ + + + +AE +LYA Sbjct: 562 DRTQVLAKHADDVNFREVIESLTRVSRLAVKQISHDL-----VDENLFENDAESKLYAAS 616 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 E + + L ++ PI +FD+ +VNVD++ +++NR + L I + Sbjct: 617 KAIDLQDVEGQGGE---AVYQALAALQMPIANYFDETMVNVDNQTIKNNRYAQLNLIHRL 673 Query: 692 ILIVINVQKIV 702 + + ++ IV Sbjct: 674 AVGLGDLSNIV 684 >gi|319956464|ref|YP_004167727.1| glycyl-tRNA synthetase beta chain [Nitratifractor salsuginis DSM 16511] gi|319418868|gb|ADV45978.1| glycyl-tRNA synthetase beta chain [Nitratifractor salsuginis DSM 16511] Length = 684 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 189/728 (25%), Positives = 337/728 (46%), Gaps = 73/728 (10%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M L+EI EE+PA K + + +L+E + + +TP RL L Sbjct: 1 MSTQPLLIEIGVEELPALPLLKILDRIEASWKKVLQEHQLS-SDFSFDYTPRRLVLRHNA 59 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +++EE +GP V G A +GF R G+ + +V Sbjct: 60 IPLAQEDRVEELVGPPVEIAIKEGKPTPAGEGFARKCGVAFEQLD--RTHKGNREVLYYR 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P D+L ++ + + + K MRW H +IRP++ + L E Sbjct: 118 REVPGSQTRDLLPEMIREWVASMNFGKMMRWGDRHD-----EFIRPVRWLQVRLGQES-- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + +L + G T+ HR + P++V + L++ V L + RR +IL D Sbjct: 171 ---VPAELFGVASGTRTFVHRMVSFDPVEVPDPAKFEEILQKGEVTLRADERRRSILEDF 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + + GL++ D LL+E++ + E + +G+FD+K+L LP E+I ++K +Q+ F Sbjct: 228 DTIEAESGLKIERDGALLDEVVAITEHPKALLGTFDEKFLELPPEVIMTSMKEHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 EG L+N F++VSN + + ++ GN RV+ RLEDAL F++ D ++ L++ Sbjct: 288 FDGEGRLSNHFVVVSNAVTENY-SQVIAGNERVLRPRLEDALFFYRNDLKRGLSIEGLEK 346 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA----QLIDAD- 407 + F +GT ++V R R + ++A ++ + Sbjct: 347 ------------------------IQFIDGLGTLKDKVDRERNIALRLAGIYMDKLEQET 382 Query: 408 -------VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 L+DRA+ L+KADL TE+V EF ELQG +G YA E+ C AI+E + Sbjct: 383 GRSALEIEELMDRAVTLAKADLLTEMVYEFTELQGLMGYYYAKALGEDPLVCTAIKEQYR 442 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P G +P+ S +++A KLDTL+ +++ + P+GSKDP+ALRRA GIIRI+ Sbjct: 443 PEGEGAELPSTIFSSILAMAIKLDTLLGLFSVGKIPTGSKDPFALRRAVNGIIRIVTRYD 502 Query: 521 IDIPLSQFIE--DQNLILFFHDRLKLYLHDRDI-----RHDLIEAILRPENDNLLTIVDL 573 + + + +E F ++L+ ++ +R +I A+L ++ I Sbjct: 503 LSFDIPKMMELLADQYAPFDEEKLESFILERIYKSLKANPSIIAAVLATGERDVNEIAKK 562 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L + + KR+ I A + + + LE+ P+ E E++L+ Sbjct: 563 VAALRAILEQEGARELFTTFKRVANISA---EVDLDGVLEVDPELFEAEEERKLWEAFRR 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ Y + L ++ ++ FFD VLVN ++ ++R NR +++ I L Sbjct: 620 TRER-----EYGDYQEELQALFALKPLLDAFFDSVLVNAEEEKLRLNRQAMVASIYKTFL 674 Query: 694 IVINVQKI 701 + ++++I Sbjct: 675 NIADLKEI 682 >gi|315222123|ref|ZP_07864032.1| glycyl-tRNA synthetase, beta subunit [Streptococcus anginosus F0211] gi|315188749|gb|EFU22455.1| glycyl-tRNA synthetase, beta subunit [Streptococcus anginosus F0211] Length = 679 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 194/701 (27%), Positives = 330/701 (47%), Gaps = 76/701 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + L+E+ EE+PA + + + L + L + + + + + TP RL + + LS Sbjct: 3 KNLLVELGLEEMPAYVVTPSMKQLRDKMAAFLTDNRLTFDKIEMFSTPRRLAVRVSNLSE 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP G KA GF+R GL I KG+ Y+ V + Sbjct: 63 KQTDLTEDFKGPSKKIALDAEGNFTKAAQGFVRGKGLTVED---ITFRDIKGEEYVYVTK 119 Query: 115 KP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +E+++ +V + + +P +M W + F +IRP+ ++ +L E Sbjct: 120 QEIGKPVEELIDGVVD-VLTSLSFPVNMHWGSN-----TFEYIRPVHTLTVLLDDESFL- 172 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++L +I G + GHRF H +K+QS D Y DL + V+ P R N IL+ Sbjct: 173 ----MNLFDIESGRTSRGHRFLG-HEVKIQSADSYEEDLRKVFVIASPMERENMILDQIK 227 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + + + D+DLL+E++ L+E+ F+G FD++YL +PEE++ ++K NQ+ FV R Sbjct: 228 EIEKMHNVHVEIDEDLLDEVLNLIEYPTAFIGRFDERYLDVPEEVLVTSMKVNQRYFVVR 287 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L F+ V N A + +V+GN +V+ ARLEDA FW+ DQ + Sbjct: 288 NENGKLLPYFVSVRNGNA-EHLENVVKGNQKVLVARLEDAEFFWREDQRLV--------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 + + +L +V FH KIG+ E + R + +A+ L ++ Sbjct: 338 -----------ISDLVEKLK--NVTFHEKIGSLAEHMERTAKIAALLAEKAQLSKQEMKD 384 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA + K DL T +V EF ELQG +G++YA+L EN + AI EH P +P Sbjct: 385 VARAAAIYKFDLLTGMVGEFDELQGIMGEKYALLAGENTAVAKAIREHYLPTASDGELPD 444 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 KI +++ADK+DT+++F+++ PSGS DPYALRRAT G++RI+ + I L + IE Sbjct: 445 TKIGAILAIADKMDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDKFGWHIALDELIE 504 Query: 531 --------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + ++ FF R++ + D D+ D++ ++L + +V+ Sbjct: 505 EIYALQFDSLTYSNKEQVLDFFRARIEKMM-DSDVPKDIVSSVLNSSTFVVRDLVEAASL 563 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E + + S R+F + E + EK L+A + + Sbjct: 564 LAEKAQEDSFKSSVESLARVFNLAEKAETAGV-----VDESLFENAEEKALHAAVENLTL 618 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + L ++ I+ FFD +V +D + Sbjct: 619 -------SDDLADNIEQLFALSPVIDAFFDNTMVMAEDEAI 652 >gi|294667522|ref|ZP_06732738.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602751|gb|EFF46186.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 720 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 197/756 (26%), Positives = 329/756 (43%), Gaps = 93/756 (12%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G + + + TP RL + Sbjct: 1 MSEHFPLLIELGTEELPVKALPGLAQAFFDGVLSGLEKRGVAITRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGKPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGS 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + YI L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGAVSLAAPGEYIDALRSAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAATQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+G+ ++V+R+ L + IA + AD Sbjct: 348 G----------------------EGLASVTYQAKLGSVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDESYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-- 526 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKYW 505 Query: 527 -----------------------------------------QFIEDQNLILFFHDRLKLY 545 + E + F DRL+ Y Sbjct: 506 IVFSHILAARAYGELGLDGQVDKLKKELNESTAEQMVDRPIEQNELKFFYDFIVDRLRGY 565 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 D+ + A+ +L I + F + E + KRI IL K Sbjct: 566 YADKGVPATHFNAVAELRPASLYDFDRRIDAIGIFAQLPEAEALAAANKRIRNILR---K 622 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 EI +I L AE L + +++ Y + L + ++ FF Sbjct: 623 VEGEIPGDIDTTLLREPAEVALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFF 682 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D V+VN DD ++R NRL+LL+ + + V ++ + Sbjct: 683 DGVMVNADDPQLRANRLALLKKLGERLGSVAAIEHL 718 >gi|322387698|ref|ZP_08061307.1| glycyl-tRNA synthetase beta subunit [Streptococcus infantis ATCC 700779] gi|321141565|gb|EFX37061.1| glycyl-tRNA synthetase beta subunit [Streptococcus infantis ATCC 700779] Length = 703 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 199/710 (28%), Positives = 333/710 (46%), Gaps = 75/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y+ ++ + TP RL + + GL+ + E+ GP Sbjct: 40 PAYVVTPSEKQLGEKMAAFLDDNRLSYEGIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 99 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 KA GF+R GL I+ KG+ Y+ V + + + Sbjct: 100 SKKIALDAEGNFSKAAQGFVRGKGLTVDD---IEFREIKGEEYVYVTKHEAGKPAEEVLN 156 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SMRW+ F +IRP+ ++ +L ++ ++LD +I G Sbjct: 157 GIPEVLASLSFPVSMRWANN-----TFEYIRPVHTLTVLL-----DDEALELDFLDIHSG 206 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H ++++ D Y DL + V+ D R N I + + G+++ D Sbjct: 207 RVSRGHRFLG-HEVEIRHADSYEEDLRKVYVIADSIERENMIREQIKEIEAEHGVQVQID 265 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ FMG+FD KYL +PEE++ +++T+Q+ FV R EG L FI V Sbjct: 266 EGLLNEVLNLVEYPTAFMGNFDPKYLEVPEEVLVTSMETHQRYFVVRDLEGNLKPNFISV 325 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ ++ Sbjct: 326 RNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 364 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 +A+L V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 365 DLVAKLS--HVTFHEKIGSLREHMIRTGQIAILLAEKAGLSVDESIDLARAAAIYKFDLL 422 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L EN + AI EH P +P +K+ ++LADKL Sbjct: 423 TGMVSEFDELQGIMGEKYALLAGENAAVAQAIREHYLPDSADGALPESKVGAILALADKL 482 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ + +IP+ + I Sbjct: 483 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEDFGWNIPMDELIASLYALSFDSLTYD 542 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 543 NQEEVLNFIKARVDKMMGS--TAKDIKEAVLASSNFVVSDMIEAAEALSEAAKTEDYKSS 600 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E S+++ E EK L + S Sbjct: 601 VESLSRAFTLAEKAEG-----SVKVDTSLFENEQEKELAQAVESLELKGSAS-------D 648 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L + I+ FFD +V +D +V++NRL++L + N V Sbjct: 649 KLTQLFVLSPVIDAFFDNTMVMAEDIDVKNNRLAILAELVNKAKTVAAFN 698 >gi|290890505|ref|ZP_06553580.1| hypothetical protein AWRIB429_0970 [Oenococcus oeni AWRIB429] gi|290479901|gb|EFD88550.1| hypothetical protein AWRIB429_0970 [Oenococcus oeni AWRIB429] Length = 689 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 208/736 (28%), Positives = 350/736 (47%), Gaps = 83/736 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D+LLEI EEIPA + ++ L + + + Y+ ++ + TP RL + + LS Sbjct: 1 MADYLLEIGLEEIPAHLVTESENQLIERIKNFFSDNLLDYKKIQTFSTPRRLAVLVHDLS 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +S K EE GP + G +A +GF RS G D + G VYL Sbjct: 61 NYSQSKDEELRGPSLKVAKDESGNWSRAAEGFARSQGTSPAE-----FDERDGYVYL-NK 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 E++LK I ++K+ + M+W+ ++RP++ ++ +L + Sbjct: 115 HIEGVSAEEILKKIGIEVVEKMKFSTYMKWADFK-----LEYVRPIRWLVSLLDS----- 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 KI+ + ++ T GHRF + I + Y L A V++D + R+N+I N Sbjct: 165 KIVPFQILDVKADRFTRGHRFLSGGKISISEAGDYEETLNNAYVIVDAKVRKNSIRNQIR 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++A L D DLLEE+ +VE+ F G FD KYL LPE ++ +++ NQ+ F Sbjct: 225 KIADTNDWNLHVDPDLLEEVNNIVEYPTAFAGVFDDKYLNLPEIVLTTSMRDNQRFFYVT 284 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G + FI V N + + +V+GN +V+ ARLEDA F++ DQ + + K Sbjct: 285 NKQGKILPHFISVRNGDS-NQIENVVKGNEKVLVARLEDAEFFFEEDQKHNIDFFMKKAE 343 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 L VFH KIGT E + R+ + +A + D + Sbjct: 344 RL----------------------VFHEKIGTMTEHMKRVEKIAALLANQLAFNDQEKKD 381 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA + K DL T +V EF ELQG + YA + EN + C A+ E P ++P Sbjct: 382 LKRAANIYKFDLTTAMVGEFAELQGTMAGIYAKIFGENQTVCQALSEQYLPTSSEGDLPK 441 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 +K+ ++LADKLDTL +F+A PSGS DPY LRRA LGI+RII + K + +S+ + Sbjct: 442 SKVGAMLALADKLDTLFSFFAAGIIPSGSNDPYGLRRAALGIVRIIGQQKWNFSVSKLLH 501 Query: 531 -----------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +I FF DR++ DIR+DL++A N+ + Sbjct: 502 SLKTAVDKHEDGFLIDFADTKEISRKVIEFFLDRIRQ--QSSDIRYDLLDASTGKVNEGI 559 Query: 568 LT-IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 + I ++ L + + + R+ + + ++EI P+ + +EKR Sbjct: 560 INYIFKRVRILASHVADPDFRDVIEALTRVQNLAEKNKS-----NVEIDPELFVTNSEKR 614 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 LY + D + + H + L S+ EPI +FD+ ++ + +++NR++ + Sbjct: 615 LYQLTKDKDPIV--LLSKGD-HTVYQFLASLKEPINNYFDENMIMDKNPIIKNNRVAQIN 671 Query: 687 YIKNIILIVINVQKIV 702 + N+I + +++K+V Sbjct: 672 LLNNLISSLGDLRKVV 687 >gi|15903371|ref|NP_358921.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae R6] gi|116516232|ref|YP_816770.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae D39] gi|148984818|ref|ZP_01818071.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP3-BS71] gi|73919753|sp|Q8DP66|SYGB_STRR6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|122278344|sp|Q04JM8|SYGB_STRP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|15458973|gb|AAL00132.1| Glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae R6] gi|116076808|gb|ABJ54528.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae D39] gi|147922840|gb|EDK73956.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP3-BS71] gi|301800324|emb|CBW32950.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae OXC141] Length = 678 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 195/712 (27%), Positives = 326/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I G Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ ++ + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|289168228|ref|YP_003446497.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis B6] gi|288907795|emb|CBJ22635.1| glycyl-tRNA synthetase beta subunit [Streptococcus mitis B6] Length = 678 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 195/712 (27%), Positives = 328/712 (46%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I G Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLLDEEE-----FDLDFLDIKGG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRSQFVIADPREREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALTFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKTEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVAEMLEAASALVEASKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L V+ + +Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSSLFENDQEKALAEVVESL-------VLSGTANQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ I+ FF+ +V +D VR NRL++L ++ + +I Sbjct: 624 QLNHLFALSPVIDAFFENTMVMAEDEAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|149002871|ref|ZP_01827797.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] gi|237649565|ref|ZP_04523817.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae CCRI 1974] gi|237821555|ref|ZP_04597400.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae CCRI 1974M2] gi|147759165|gb|EDK66159.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] Length = 678 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 195/712 (27%), Positives = 326/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I G Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ ++ + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVKTL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|289668590|ref|ZP_06489665.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 731 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 196/767 (25%), Positives = 331/767 (43%), Gaps = 104/767 (13%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G + + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFEGVLSGLEKRGVAITRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAAGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGT 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGTVSLAAPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 IEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+GT ++V+R+ L + IA + AD Sbjct: 348 GD----------------------GLASVTYQAKLGTVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VHARRAAQLAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++AD+LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ + Sbjct: 446 ALSPLGKVLAIADRLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDVKAT 505 Query: 529 IEDQNLIL----------------------------------FFHDRLKLYLHDRDIRHD 554 + +L F DRL+ Y D+ + Sbjct: 506 LVIAVKLLPWDRLVRKATLKDEETIAAIDSAQYAQLTSEVFDFILDRLRGYYADKGVPAT 565 Query: 555 LIEAI--------------------LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 A+ L + +L I + F + + E + K Sbjct: 566 HFNAVAALFSVAPEGAPTAHGVGASLGATHGSLYDFDRRIDAIGSFATLPEAEALAAANK 625 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI IL K EI +I L AE+ L + +++ Y + L Sbjct: 626 RIRNILR---KVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARL 682 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ + Sbjct: 683 ARLRPQVDAFFDAVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEHL 729 >gi|319947574|ref|ZP_08021804.1| glycyl-tRNA synthetase beta subunit [Streptococcus australis ATCC 700641] gi|319746262|gb|EFV98525.1| glycyl-tRNA synthetase beta subunit [Streptococcus australis ATCC 700641] Length = 678 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 200/712 (28%), Positives = 339/712 (47%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 VP + + +P SM W+ +F +IRP+ +++ +L ++ +DLD +I G Sbjct: 132 GVPEVLASLTFPVSMHWANN-----SFEYIRPVHTLIVLL-----GDEALDLDFLDIQSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ + Sbjct: 182 RVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQIE 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI V Sbjct: 241 EGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +V+GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 340 DLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSYD 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ +A+L N + +++ + L+E + + Sbjct: 518 NQAEVLNFIKARVDKMMG--RTAKDIKDAVLAGSNFVVADMLEAAEALSEAAKTDGYKAA 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+ + + EK L I + + + K Sbjct: 576 VESLSRAFNLAEKA-----DASVAVDASLFENDQEKALAKAIEEL--ELAGAASDK---- 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 625 -LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANAVAAFNQL 675 >gi|312867828|ref|ZP_07728033.1| glycine--tRNA ligase, beta subunit [Streptococcus parasanguinis F0405] gi|311096583|gb|EFQ54822.1| glycine--tRNA ligase, beta subunit [Streptococcus parasanguinis F0405] Length = 678 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 203/713 (28%), Positives = 338/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSNLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W+ F +IRP+ ++ +L ++ +DLD +I Sbjct: 132 GI-PEVLASMTFPVSMHWANN-----TFEYIRPVHTLTVLL-----GDEALDLDFLDIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGQLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEETAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L EN + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGENAAVATAIREHYLPDSADGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 517 DNQAEVLNFIKARVDKMMG--RTPKDIKEAVLAGSNFVVADMLEAAEALSEAAKTDGYKA 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L + S K Sbjct: 575 AVESLSRAFNLAEKA-----DASVAVDANLFENDQEKALAQAAESL--ELTGSASDK--- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 625 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANNVAAFNQL 675 >gi|55736573|gb|AAV60215.1| glycyl-tRNA synthetase beta subunit [Streptococcus thermophilus LMG 18311] Length = 714 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 198/712 (27%), Positives = 333/712 (46%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 51 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 110 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 KA GF+R GL I+ KG+ Y+ V + + Sbjct: 111 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 167 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SM W+ +F +IRP+ +++ +L ++ ++LD I G Sbjct: 168 GIPEVLASLTFPVSMHWANN-----SFEYIRPVHTLIVLL-----GDEALELDFLGIKSG 217 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H +++ + D Y DL V+ + + R N I + + G+++ + Sbjct: 218 RVSRGHRFLG-HEVEITNADSYEEDLRTVYVIANSKERENMIREQIKAIEAEQGVQVQIE 276 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI V Sbjct: 277 EGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFISV 336 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +V+GN +V+ ARLED FW+ DQ ++ Sbjct: 337 RNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 375 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 376 DLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDLL 433 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 434 TGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADKL 493 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 494 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSYD 553 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 554 NQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKAA 611 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+ + + EK L + S K Sbjct: 612 VESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQAAESL--ELTGSASDK---- 660 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 661 -LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 711 >gi|82701684|ref|YP_411250.1| glycyl-tRNA synthetase, beta subunit [Nitrosospira multiformis ATCC 25196] gi|82409749|gb|ABB73858.1| glycyl-tRNA synthetase beta chain [Nitrosospira multiformis ATCC 25196] Length = 739 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 201/746 (26%), Positives = 340/746 (45%), Gaps = 90/746 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + K E + + LK +G+ ++ + +P RL ++L ++ +P+ + Sbjct: 26 PPKSLKKLGESFAQGIAAGLKRQGLAREDAAATPFASPRRLAVHLTCVAAQAPDTSSLKK 85 Query: 72 -GPRV------GAGKKAIDGFLRS-TG----LQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 P G A+ LRS G + +S + D K ++L + K Sbjct: 86 LMPVAVGLDENGQPTPALLKKLRSLCGDADPVPFLSQLKRAHDGKTETLFLDSVVK-GAT 144 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 + + L+T + ++K+P + M + + +++RP +++ + ++++D+ Sbjct: 145 LAEGLQTALAGTLEKLPIARMMTYQLADG-WNTINFVRPAHALVAL-----HGKEVVDVS 198 Query: 180 LKEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLAS 237 + + G T GHRF A P+ V+ D Y L EE V+ RR I A Sbjct: 199 ILGLTAGRETQGHRFEAMTSPLIVKDADSYEHQLQEEGAVIASFSHRRAEIERQLLAAAR 258 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 L+L LL+E+ LVE +V G F+ +L +P+E + LT++ NQK F G Sbjct: 259 KEDLKLTRYDALLDEVAALVERPRVLTGEFETGFLDVPQECLILTMQANQKYFPLLDARG 318 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L++ F++VSNI+ D + ++ GN RV+ +RL DA F+ +D+ Sbjct: 319 QLSHRFLIVSNIRPVDARS-VIAGNERVLRSRLADAKFFFDQDRR--------------- 362 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAI 415 K L R+ L VV+H K+GTQ ERV RI + + I + + A A Sbjct: 363 -----KTLASRVEGLQR--VVYHNKLGTQAERVERIWAIAQTIGLQLGGNELAARAGEAA 415 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL T++V EFPELQG +G+ YA DAIE+H KPR + +P N + + Sbjct: 416 MLAKADLLTDMVGEFPELQGIMGRYYAKHDGVAEEVADAIEDHYKPRFAGDELPRNAVGV 475 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 V+LADKL+TL+ + I + P+G KDP+ALRR LG+IRI++E ++ + L+ +E I Sbjct: 476 CVALADKLETLVGLFGIGQIPTGDKDPFALRRHALGVIRILIEKEVPLALNILLEQTADI 535 Query: 536 L---------------------FFHDRLKLYLHDRDI------------------RHDLI 556 F ++RLK Y I I Sbjct: 536 FGQRIKGSAETIAKTATETLEGFIYERLKHYFSAEAIEGQITGFGRSPNEDRSTFSPQQI 595 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L L + + + F + + E + KR+ IL E + EI Sbjct: 596 DAVLALRPQLLNDVKKRLLAVRAFAALPEAESLAATNKRVGNILRKAE---VDAGGEIDT 652 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 L AE+ L+ + + Y L ++ P++ FFD V+VN +D Sbjct: 653 DLLQTPAEQALHQALDRIIPEADAAFAAGDYTASLQALAALKVPVDQFFDTVMVNTEDAA 712 Query: 677 VRDNRLSLLQYIKNIILIVINVQKIV 702 +R NRL+LL ++ I+ + ++ ++ Sbjct: 713 LRHNRLALLAQMQKIMNRIADISRLA 738 >gi|218885395|ref|YP_002434716.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226737048|sp|B8DPG1|SYGB_DESVM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|218756349|gb|ACL07248.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 701 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 206/734 (28%), Positives = 333/734 (45%), Gaps = 68/734 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI EE+P+R +L+ L ++GV ++++R TP R + ++G++ Sbjct: 1 MSQFVLEIGFEELPSRFLPGLERELAERFARALDDDGVEHESIRVLTTPRRAAVLIEGIN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E E GP V G KA +GF R+ G+ + D KG+ Sbjct: 61 PVQREAEEVVPGPPVRVAFDAEGKPTKAAEGFARTQGVDMADIFTLSTD--KGEYIAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R D++ T P + +P+PK MRW + F++ RPL+ +L + + Sbjct: 119 RTGGANAADLIATACPTVVAALPFPKRMRWGSGD-----FTFGRPLRWLLALF-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRD-LEEAMVLLDPECRRNAILNDA 232 ++ ++ + G +T+GHR H P+ V+S D Y+ +E+ V DP RR IL Sbjct: 169 AVVPFEVGGVVSGGVTWGHRIHGAGPLVVKSADDYLNVVIEKGGVTPDPAERRAMILAGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A A G ++ + LL+E+ GL E +G D +L LP E++ +++++QK F Sbjct: 229 NAAAEAAGGRILWKESLLDEVQGLAEHPVPLLGDIDPSFLELPREVLLTSMESHQKSFGV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ D A + +G RV+ ARLED FWK D Sbjct: 289 EGPDGALLPHFLTVLNLTPLD-VALVKKGWERVLRARLEDGRFFWKTD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 L+ D +A LD +V+F +G+ G++ R+ L +A+ AD + Sbjct: 336 --------LAASFDAWLAELD--NVIFLGPLGSMGDKTRRLEKLCAWLAKAAGVADESAC 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL +E+V EF LQG +G YA E + A+ E P GP VP Sbjct: 386 ARAGRLSKADLVSEMVGEFDTLQGIMGGIYARRMGEPETVAAALAEQYLPAGPDSPVPAT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S+ADK DT+ + + P+G+ DPYALRR LGI RI+LE+ + I + + Sbjct: 446 LAGALLSIADKADTMAGCFGLGMIPTGAADPYALRRCALGIARIVLEHGLRIDVRELFRT 505 Query: 532 QNLIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPEND-----NLL 568 + FF RLK + L+EA L + ++ Sbjct: 506 ALALYGERAWKLAPAEALVKLEEFFMARLKNHFMAAGHETLLVEAALAADTPEGAGIDVR 565 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI-SLEISPQYLLLEAEKRL 627 + L++F +L+ KR I+ + ++ + S L +AEK L Sbjct: 566 AAGARLAALSDFSRRDDFGSAVLTFKRAANIIRKQGQEGGAVLDGAYSHALLAEDAEKAL 625 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 A + + + + LL + ++ FFD V+V DD VR NRL+LL+ Sbjct: 626 AARLEEVAPRFDALWAADDFASLFGLLGELRPAVDAFFDGVMVMCDDAAVRTNRLNLLKA 685 Query: 688 IKNIILIVINVQKI 701 + + + + + Sbjct: 686 LTLRLGRLADFGAL 699 >gi|21233508|ref|NP_639425.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770473|ref|YP_245235.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. 8004] gi|25009328|sp|Q8P3I5|SYGB_XANCP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|81303580|sp|Q4UP08|SYGB_XANC8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|21115360|gb|AAM43307.1| glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575805|gb|AAY51215.1| glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris str. 8004] Length = 698 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 201/734 (27%), Positives = 334/734 (45%), Gaps = 71/734 (9%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ GV + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFDGVLAGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G +A+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGKPTRALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P +L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGAQAAALLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +I +L + IT GHRF I + + YI L A VL+D + RR I Sbjct: 172 ---GDTVIPAELLGVRGDRITRGHRFMHDGDIALAAPGDYIDALRAAHVLVDADARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVDAAARQAGGSARISDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI + D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIVSKD-VAEVAKGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLPKL 505 Query: 529 IE---------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 I+ +L F DRLK Y D+ + A+ + +L Sbjct: 506 IDVGLASLPDAVKPHADRNTETVRADLYDFILDRLKGYYADKGVAATHFNAVAELKPASL 565 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I + F + + E + KRI IL K EI +I L AE+ L Sbjct: 566 YDFDRRIDAIGIFATLPEAEALAAANKRIRNILR---KVEGEIPGDIDTTLLREPAEEAL 622 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ Sbjct: 623 AEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKK 682 Query: 688 IKNIILIVINVQKI 701 + + + V ++ + Sbjct: 683 LGDRLGSVAAIEHL 696 >gi|77414048|ref|ZP_00790218.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] gi|77159890|gb|EAO71031.1| glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] Length = 679 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 198/710 (27%), Positives = 338/710 (47%), Gaps = 74/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + ++ +P +M W+ +F +IRP+ +++ +L ++ ++LD +I G Sbjct: 132 SVTEVLTELTFPVNMHWANN-----SFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I++ H + + + D Sbjct: 182 RISRGHRFLGSDT-EILSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKENISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKLN--------------------IA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 340 DLVEKLK--QVTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 398 TGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADKF 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYA 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + + + D+ EA+L + + I ++ +K ++ Sbjct: 518 NQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLI---LEASQALVQKSKDAQY 573 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 +S + + + + EK +S + EK LY I + H Sbjct: 574 KVSVESLSRAFNLAEKVTHSVS--VDYSLFENNQEKALYQAILSLEL-------TEDMHD 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D L ++ I FFD +V DD +++ NRL+LL + V Sbjct: 625 NLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFN 674 >gi|188993684|ref|YP_001905694.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. B100] gi|229558587|sp|B0RYX3|SYGB_XANCB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|167735444|emb|CAP53659.1| Glycyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris] Length = 698 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 201/734 (27%), Positives = 333/734 (45%), Gaps = 71/734 (9%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ GV + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFDGVLAGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G +A+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGKPTRALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P +L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGAQAAALLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +I +L + IT GHRF I + + YI L A VL+D + RR I Sbjct: 172 ---GDTVIPAELLGVRGDRITRGHRFMHDGDIALAAPGDYIDALRAAHVLVDADARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVDAAARQAGGSARISDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI + D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIVSKD-VAEVAKGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLPKL 505 Query: 529 IE---------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 I+ +L F DRLK Y D+ + A+ +L Sbjct: 506 IDVGLASLPDAVKPHADRNTETVRADLYDFILDRLKGYYADKGVAATHFNAVAELTPASL 565 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I + F + + E + KRI IL K EI +I L AE+ L Sbjct: 566 YDFDRRIDAIGIFATLPEAEALAAANKRIRNILR---KVEGEIPGDIDTTLLREPAEEAL 622 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 + +++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ Sbjct: 623 AEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKK 682 Query: 688 IKNIILIVINVQKI 701 + + + V ++ + Sbjct: 683 LGDRLGSVAAIEHL 696 >gi|157737475|ref|YP_001490158.1| glycyl-tRNA synthetase subunit beta [Arcobacter butzleri RM4018] gi|157699329|gb|ABV67489.1| glycyl-tRNA synthetase, beta chain [Arcobacter butzleri RM4018] Length = 671 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 189/716 (26%), Positives = 346/716 (48%), Gaps = 67/716 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA ++ +L+ ++ + ++TP RL L+ + Sbjct: 5 LLIEIGVEELPAIPFLNELPNIEKKWSDILERNRLLC-DFDFFYTPRRLVLWHREFQVKQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E+ G + G A F G+ KKD KG+V Sbjct: 64 EDSTIEQFGAPIKIAYKDGVPTGAAISFAAKLGIDVS--VLEKKDLGKGEVLYFKQEVIG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L ++ + + + KSMRW++ S+IRP++S+ +L E+I+D Sbjct: 122 SESKTLLNEMINEFVASLNFGKSMRWASRTD-----SFIRPIRSLSVLL-----GEEIVD 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +L + N ++ HR + P Y L+++ V+L P+ RR IL + Sbjct: 172 AELFGVESSNFSFAHRMVSYEPFTYSFAGDYFCKLDKSGVILYPDERRKIILEQMKNIEQ 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +++ D +LLEE++ + E+ +G FD+++L LPEE+I ++K NQ+ F ++G Sbjct: 232 RHNIKIEIDTELLEEVVAITEYPTALIGKFDEEFLELPEEVIVTSMKENQRYFAVY-KDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN + +D G I+QGN +V+ RL DA+ F+K D N + LK+ Sbjct: 291 NLTNNFIVVSNAKTNDFG-YIIQGNEKVLRPRLADAMFFYKNDIKNGLSNEGLKK----- 344 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDRAIV 416 +VF +G+ ++ R + +A + + L+ +A++ Sbjct: 345 -------------------LVFVEGLGSMYDKCEREAKIASYLANTFEVKEKELIQKAVM 385 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 LSKADL +E+V EF ELQG +G YA + E+ A++E P G +P+N S Sbjct: 386 LSKADLMSEMVYEFTELQGLMGYYYAKIAKEDNLVSLALKEQYLPTGEDSELPSNVFSSI 445 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL-- 534 V+L++KLD L+ +++ + P+GSKDP+ LRRA GI++I +E+K+ I LS+ I++ + Sbjct: 446 VALSNKLDNLMALFSVGKIPTGSKDPFGLRRAAAGIVKIAMEHKLPIDLSKIIDELSTNY 505 Query: 535 --------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 I FF++RL + +++A+L ++ I + LN S Sbjct: 506 KNLDKKVLIEFFNERLFKIFE---VNPTVLKAVLASGETDIYKISQKLCALNPIVQSDNF 562 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + ++ + KR+ I+ + + L I + + EK L+A ++ + +K Sbjct: 563 KDYVATFKRVANII---KDVDVNSKLLIDEKLFEDKEEKELFAKFNEVQSKT-----YKT 614 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y + + L ++ ++ FFD V VN ++ +++ NR +L+ I + ++++I Sbjct: 615 YDEELEALFALKPELDNFFDNVFVNHENEKIKINRKNLVGVIYQGFRKIADIKEIT 670 >gi|229815346|ref|ZP_04445681.1| hypothetical protein COLINT_02392 [Collinsella intestinalis DSM 13280] gi|229809126|gb|EEP44893.1| hypothetical protein COLINT_02392 [Collinsella intestinalis DSM 13280] Length = 696 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 192/733 (26%), Positives = 326/733 (44%), Gaps = 77/733 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL E+ EE+P+ + A + L ++ L E G+ + +R +P RL + + ++ Sbjct: 6 DFLFELGVEEMPSAPLNNAVKQLESLMGKGLDEAGLAHGAIRVISSPRRLAVLVSDVAEA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G KA +GF R GL T + ++D + A Sbjct: 66 TEEIHSVLRGPSAKIAFDAEGNPTKAAEGFARKNGL-TARELVRREDADGTEYVFAEQNT 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P +L + I + WP +S RW + H+ +++RP++ I C+ E Sbjct: 125 PSEPALPILTRVCEGLIPSIQWPNYRSQRWGSEHA-----TFVRPVRWICCLF-----GE 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ + ++ GN T GHR +P V S D Y LE A V L E R I Sbjct: 175 EVVPVSFADVVSGNTTRGHRVLSPGEHLVASTDAYEDVLESAHV-LSAERREQVIREGIA 233 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++ S +G+ + + +E++ L EW V +G FD+++L +P E+I ++ +NQ+ F T Sbjct: 234 KVESELGVRVDTPAKVFDEVVNLCEWPTVLVGHFDEEFLNVPSEIICESMLSNQRYFPTY 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 EG L F++VSN A ++ GN RVV ARL DA F+ D Sbjct: 294 DAEGNLTRAFVVVSNGDPK-ANATVIDGNERVVRARLYDAKFFYDEDLK----------- 341 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL- 410 +D + R + V F K+GT ++ R+ L IA+ + A A Sbjct: 342 -----------VDLEVFRERLASVGFQQKLGTVLQKSDRMEDLALAIAREAHLGAHAASS 390 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL + V EF QG +G YA E AI +H +PR +++P Sbjct: 391 AQRAAHLAKADLVSSAVVEFTSQQGVMGGYYATAAGEEPEVAAAIRDHYRPRFAGDDLPE 450 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-------------- 516 V++ADKLDT+ +AI+E P+GSKDP+ALRR+ +G++ I+ Sbjct: 451 GIAGCIVAVADKLDTIAGMFAIDEPPTGSKDPFALRRSAIGVLNILRTRLKCGYEAIVDA 510 Query: 517 -----LENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 LE ++ + ++ F R+ D + D + A+ + + Sbjct: 511 ALEGYLEQGLEF--DKAAVAASVCAFIKGRMAQMARDEKVSADTVAAVSDGDVTVPVHFF 568 Query: 572 DLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 +L L E ++ + + R + + E+ +E + +AE L Sbjct: 569 ELAHALEEARANDREAFTNLATAYARAAHL------ADAELGIEADRNL-MGDAELALLY 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + ++D + + + L ++ PI+ FFD V+V +D VR+NRL LL + Sbjct: 622 ATDAARDEVASALDARDFKAVIAALAALRGPIDAFFDDVMVMDEDMAVRENRLRLLNRFE 681 Query: 690 NIILIVINVQKIV 702 ++ + N+ ++ Sbjct: 682 DVFAGIANIGEMA 694 >gi|307706944|ref|ZP_07643743.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK321] gi|307617658|gb|EFN96826.1| glycyl-tRNA synthetase, beta subunit [Streptococcus mitis SK321] Length = 678 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 192/712 (26%), Positives = 326/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAVQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ + ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYITKEEIGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I G Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLLDEEE-----FDLDFLDIKGG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPREREQMIVDQIKAIETEHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAILAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ E++L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKESVLAGSNFVVADMLEAASALVEASKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + E EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENEEEKALAEAVESL-------VLSGTASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V ++ VR NRL++L ++ + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAENEAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|296328736|ref|ZP_06871250.1| glycyl-tRNA synthetase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154071|gb|EFG94875.1| glycyl-tRNA synthetase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 686 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 200/728 (27%), Positives = 348/728 (47%), Gaps = 73/728 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI EEIPAR ++A EDL LK + + +R Y TP RL L ++ Sbjct: 2 ELLFEIGMEEIPARFLNQALEDLKSNFEKKLKNNRIKFDGVRTYGTPRRLVLVADEVAEM 61 Query: 63 SPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E +GP + GA KA +GFL++ ++ IK D KG+ Sbjct: 62 QEDLDELSIGPSRERAYKDGALTKAGEGFLKAHRIEEEQIEIIKND--KGEYIAFKRFLK 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + E +L I+ + + + KSMRWST + RP++ L + K+I Sbjct: 120 GKPTEAILPEILKALVLEETFQKSMRWSTK-----TIRFARPIEWFLALYGG-----KVI 169 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D +++ I N + GHRF +V S+++Y++ + E V++D RR I + Sbjct: 170 DFEIEGIKSSNKSKGHRFFGKE-FEVSSVENYLKKIRENNVIIDISERRKMIEEMINNSL 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + DK LL+E+ LVE +G+F +++L +P+E++ +++K +Q+ F ++ Sbjct: 229 LEDE-KADVDKALLDEVTNLVEHPFAIVGTFSEEFLEVPQEVLIISMKVHQRYFPILNKK 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI++ N D + +GN +V++ARL DA F+ D Sbjct: 288 GKLLPKFIVIRNGI--DFSENVKKGNEKVLSARLADARFFYYED---------------- 329 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 L PLD + +L VVF +GT +V R + + + + + + R Sbjct: 330 ----LKIPLDNNVEKLKT--VVFQKDLGTIYNKVKRCEKIAEFLVGKLKYNYMKEDILRT 383 Query: 415 IVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ +EF +LQG +G+ YA+ E I I+EH PR + +P+ Sbjct: 384 VKLAKADLVSNMINEKEFTKLQGFMGENYALKAGEEIGVALGIKEHYYPRFQGDLLPSGI 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I ++D++DTL+ + + P+GSKDP+ALRR LGI+ II+ +DI L ++ Sbjct: 444 EGIIAGISDRIDTLVGCFGVGVIPTGSKDPFALRRTALGIVNIIINANLDISLKDLVKVS 503 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + +++ F R+ D R D I A+L ++DN+ T +++ Sbjct: 504 LDALEEDKVLKTDRAKVETDVLDFLKQRIINVFTDMKYRKDAILAVLDKDSDNITTALEI 563 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 +K + E S K + L KR+ I+ + + I + + EK LYA Sbjct: 564 VKVITEKLSKDKMQALLQVVKRVSNIMKGNK------DVTIKEKLFKTDIEKTLYAESKK 617 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + +++++ K Y + L ++ I+ +F+ V+V +D+ VRDNR+ L YI N+ Sbjct: 618 VESEVEQAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIGQLTYIMNLFE 677 Query: 694 IVINVQKI 701 + + K+ Sbjct: 678 KIAYLNKL 685 >gi|25010334|ref|NP_734729.1| glycyl-tRNA synthetase subunit beta [Streptococcus agalactiae NEM316] gi|81446313|sp|Q8CX30|SYGB_STRA3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|23094686|emb|CAD45905.1| glycyl-tRNA synthetase (beta subunit) [Streptococcus agalactiae NEM316] Length = 679 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 198/710 (27%), Positives = 338/710 (47%), Gaps = 74/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQTFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + ++ +P +M W+ +F +IRP+ +++ +L ++ ++LD +I G Sbjct: 132 SVTEVLTELTFPVNMHWANN-----SFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I++ H + + + D Sbjct: 182 RISRGHRFLGSDT-EILSASSYEDDLRQQFVIADAKERQQMIVDQIHAIEEKENISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKLN--------------------IA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 340 DLVEKLK--QVTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 398 TGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADKF 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYA 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + + + D+ EA+L + + I ++ +K ++ Sbjct: 518 NQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLI---LEASQALVQKSKDAQY 573 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 +S + + + + EK +S + EK LY I + H Sbjct: 574 KVSIESLSRAFNLAEKVTHSVS--VDYSLFENNQEKALYQAILSLEL-------TEDMHD 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D L ++ I FFD +V DD +++ NRL+LL + V Sbjct: 625 NLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLALLNSLVAKARTVAAFN 674 >gi|254457801|ref|ZP_05071228.1| glycyl-tRNA synthetase, beta subunit [Campylobacterales bacterium GD 1] gi|207085194|gb|EDZ62479.1| glycyl-tRNA synthetase, beta subunit [Campylobacterales bacterium GD 1] Length = 672 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 186/716 (25%), Positives = 343/716 (47%), Gaps = 68/716 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K ++ + +L++ ++ Y+TP RL ++ + + Sbjct: 5 LLIEIGVEELPAVPLLKELRNIEKKYVDILEKNSLL-GEFEFYYTPRRLVIWHREFNTQQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + +EE G + G A GF + G+ I + K +Y K K Sbjct: 64 ADSVEEFFGAPIAVAYKDGEPTPAALGFAKKCGVS-IDEISAGTKGGKEVLYYKKDVKGK 122 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 I ++L I+ I + + KSMRW + S+ S+IRP++ + +L ++++D Sbjct: 123 ESI-ELLSDIINTWINSLDFGKSMRWGS-----SSESFIRPVRWVNVLL-----GDELVD 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++L + T+ HR + + Y L++ V L E RR IL + L Sbjct: 172 VELFGVTSKKETFVHRISNFDSVSISGAKEYFDVLKKGGVTLFQEQRREDILANFASLEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+++ D DLL+E++ + E +G+FD+++L LP E+I ++K +Q+ F ++G Sbjct: 232 DNGIQIEVDADLLDEVVAITEHPTALLGTFDEEFLRLPPEVIITSMKEHQRYFPVF-KDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++VSN +D +++GN RV+ RL D L F+ D N + L++ Sbjct: 291 KLLNKFVVVSNALTNDFSE-VIEGNERVLRPRLADGLFFYDNDLKNGLSTEGLEK----- 344 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVDRAI 415 V F +G+ +++ R + + D +DRAI Sbjct: 345 -------------------VAFFKGLGSVADKIQREAKIANILFDKYKPDAKKEDLDRAI 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E+V EF ELQG +G YA+ Q E+ AI E P G +P+ IS Sbjct: 386 SLAKADLTSEMVYEFTELQGLMGSYYALEQGESQEVATAINEQYLPDGEDSALPSTAISA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI------ 529 V+++ KLDTL+ ++IN+ P+GS+DP+ALRRA G++RI E+ ++ + + + Sbjct: 446 IVAMSIKLDTLLALFSINQIPTGSRDPFALRRAVNGLVRITREHNLEFDIVETMTELASG 505 Query: 530 ----EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + Q L FF +R+K Y + ++EA+L ++ + I+ L+ S+ Sbjct: 506 YAEIDMQKLESFFLERVKQYYK---VNPSIVEAVLASGEREIVAMGQKIEALDAIASAEG 562 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 + + KR+ I + + + + + ++E+ L+ ++ + + Sbjct: 563 FSESFSTFKRVANIT---KDIDLSQDMSVDAKLFEDKSEEALFNAYNNVASK-----SYD 614 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + D L + ++ FF+ V+VN ++ V++NR SL+ I IL + +++++ Sbjct: 615 SYEEELDALLGLKPELDKFFEGVMVNAENEAVKNNRKSLVASIYKSILNIADIKEV 670 >gi|182684433|ref|YP_001836180.1| glycyl-tRNA synthetase beta subunit [Streptococcus pneumoniae CGSP14] gi|238691171|sp|B2IQU1|SYGB_STRPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|182629767|gb|ACB90715.1| glycyl-tRNA synthetase beta subunit [Streptococcus pneumoniae CGSP14] Length = 678 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 195/712 (27%), Positives = 325/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I G Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLLDEEE-----FDLDFLDIKGG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGQET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKTIEAERGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-EHLENVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|325526257|gb|EGD03874.1| glycyl-tRNA synthetase subunit beta [Burkholderia sp. TJI49] Length = 699 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 202/715 (28%), Positives = 340/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVDGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--TDVKFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFGDRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G IV+GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IVEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ---------- 532 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAYARFAGVPGV 526 Query: 533 -----NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAILAFFMDRLRGLLRERGYSAGEVDAVLGLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGATNGAVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|91790040|ref|YP_550992.1| glycine--tRNA ligase [Polaromonas sp. JS666] gi|91699265|gb|ABE46094.1| glycyl-tRNA synthetase beta chain [Polaromonas sp. JS666] Length = 731 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 203/756 (26%), Positives = 355/756 (46%), Gaps = 88/756 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLS 60 + L+E++ EE+P + K + + +L+ LK +G+ + + +P RL ++ ++ Sbjct: 7 NLLVELFVEELPPKALKKLGDAFAGVLLEQLKAQGLTTAGSVLTSFASPRRLAAHVTAVA 66 Query: 61 PHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLAV 112 + +K + ++L P G A+ L++ G ++ +K+ P K + Sbjct: 67 VQAADKAVSQKLMPVTVGLDASGQATPALLKKLQALGADALAVAGLKRVPDGKAEALFYN 126 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + L+ + AI K+P PK M + S ++RP ++ + ++ Sbjct: 127 STVIGATLAEGLQKALLEAIAKLPIPKVMTYQLADG-WSDVKFVRPAHGLVALHGSD--- 182 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILN 230 ++ ++ + GNIT+GHRF A P+ +++ D Y L ++ V+ R+ I Sbjct: 183 --VVAIEALGLKAGNITHGHRFEAAVDPVVLKNADGYAATLQKDGAVIASFAERKAEIAR 240 Query: 231 DAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 AS VG +ED LL+E+ LVE V + F+K++L +P+E + LT+K NQK Sbjct: 241 QLAAAASKVGGGARAIEDDALLDEVTALVERPNVLVCEFEKEFLDVPQECLILTMKANQK 300 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L + F++VSNI +D +A++ GN RVV RL DA F+ +D+ Sbjct: 301 YFPLLDAQGKLTHKFLVVSNISPTDA-SAVIGGNERVVRPRLADAKFFFDQDRK------ 353 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---- 404 K L R+A LD VV+H K+G+QGERV R+ + +I + + Sbjct: 354 --------------KTLASRVAGLD--KVVYHNKLGSQGERVIRVSHIAYEIGKKLYPLD 397 Query: 405 DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D+ A L+KADL T++V EFPELQG +G+ YA+ DAIE+H KPR Sbjct: 398 DSTAIHAQLAAQLAKADLVTDMVGEFPELQGTMGRYYALNDGLRPDIADAIEDHYKPRFA 457 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P N + + V+LADKL+TL+ + I P+G KDP+ALRR LG+IR++ E + + Sbjct: 458 GDELPRNSVGVIVALADKLETLVGMFGIGNLPTGDKDPFALRRHALGVIRMLTEKDLALD 517 Query: 525 LSQFIE--------------------------------------DQNLILFFHDRLKLYL 546 ++ ++ + + F +DRL L Sbjct: 518 MNALLQSAVDVFGGAVYTEGVSPSAPVPGTKGVLSTGVVMDVQTREKITDFIYDRLAGSL 577 Query: 547 HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 ++ ++A+L L + + + F + + + KR+ IL +K Sbjct: 578 REQGYSAQEVDAVLALRPQRLGDVAKRLAAVRAFAALPEAPALAAANKRVGNIL---KKA 634 Query: 607 NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + + + P+ L AE+ L + G + Y L ++ P++ FFD Sbjct: 635 DGTVEASVRPELLQEAAEQALAEALQSVGPKADAAFTAGDYAASLQGLAALKAPVDAFFD 694 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 V+VN +D +R NRL LL + + V ++ K+ Sbjct: 695 GVMVNAEDPALRANRLGLLATLHQAMNRVADLSKLA 730 >gi|225850124|ref|YP_002730358.1| glycyl-tRNA synthetase, beta subunit [Persephonella marina EX-H1] gi|254781858|sp|C0QUJ3|SYGB_PERMH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225644860|gb|ACO03046.1| glycyl-tRNA synthetase, beta subunit [Persephonella marina EX-H1] Length = 705 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 201/747 (26%), Positives = 344/747 (46%), Gaps = 88/747 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY---QNMRQYWTPHRLFLYLK 57 M +LLEI EE+P + A L L E Y +N+ + TP R+ L Sbjct: 1 MKKYLLEIGCEELPPKAVDTAISYFKERL-EGLFENFFEYRTEENISVFGTPRRIGFILS 59 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L P + + LGP G KA F + I+ + KG Sbjct: 60 NLREKEPSEEKTILGPPAKVGIDEKGNFTKAALAFASKNNIPVEQLKIIENE--KGRYIG 117 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 A L K + I ++ ++P I K+P+PK MRW+ + F + RP++ I+ +L Sbjct: 118 ATLIKEGKDIRTFIQEVIPDLITKIPFPKLMRWNE-----TGFRFSRPVRWIVSLL---- 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAP-----HPIKVQSLDHYIRDLEEAMVLLDPECRR 225 +++ + I T+ HRF K+ +D Y + ++ ++ E R+ Sbjct: 169 -DNEVVSFSIAGIDADRYTHLHRFMTTPTGRGERKKIPDVDSYFQIMKLGFIIPKYEERK 227 Query: 226 NAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 A+ A+++ E V D+DLL+E+ L E+ +G F +YL LP+E+I K Sbjct: 228 EAVKTQLTGFANSINAEPVIDEDLLDEVTNLTEFPVGILGDFSPEYLILPKEVIITVCKV 287 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 +Q+ F ++G L F+ SN D + G +V+ ARLEDAL F++ D Sbjct: 288 HQRYF-NFEKDGKLIPKFLAFSNTAVKD-REKVKSGYEKVLKARLEDALFFYEED----- 340 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 L L+ +L+ + FH K+G+ ++V R + +++ ++ Sbjct: 341 ---------------LKHNLEDFYPQLE--GIQFHHKLGSMLDKVKRNGEIAVLLSRELN 383 Query: 406 -ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 ++ + RA LSK DL TE+V+EF ELQG +G YA+ Q E AI EH P+ Sbjct: 384 FENLKDLLRANKLSKCDLLTEMVKEFDELQGIMGMHYALKQGEKEEVAKAIYEHYLPKTS 443 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 + +P I +SL+DKLDT+I+F +I EKP + DP+ +RR ++GI+RI++E ID+ Sbjct: 444 DDQLPETDIGTLLSLSDKLDTVISFISIGEKPKATADPFGIRRNSIGIVRILVEKGIDLD 503 Query: 525 LSQFIED-----------------------------QNLILFFHDRLKLYLHDRDIRHDL 555 L + ++D ++ F R Y+ D+ D+ Sbjct: 504 LKKLLQDISREARKVKILRLADIEKEWEIIFDERTIPEILDFIEGRFIAYMKDKGFDTDI 563 Query: 556 IEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEIS 615 I +++ ++ NL IK + E + + + KR+ +I+ E + Sbjct: 564 INSVVSVDSYNLYRNYLKIKSIQELKKNPEFTDIMTVFKRVGRIIP------EEFEEHFN 617 Query: 616 PQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDR 675 P L+ + EK LY ++ + ++ +RY + + L + I+ FFD V+V +D+ Sbjct: 618 PDTLVQDEEKELYRKYTEVNKIFSKDVEDRRYTEALNELLKMKPFIDKFFDNVMVMTEDK 677 Query: 676 EVRDNRLSLLQYIKNIILIVINVQKIV 702 ++R+NRLSL++ I N+ + + KI Sbjct: 678 KLRENRLSLMKLINNMFRKIADFTKIT 704 >gi|22536454|ref|NP_687305.1| glycyl-tRNA synthetase subunit beta [Streptococcus agalactiae 2603V/R] gi|81845501|sp|Q8E1T3|SYGB_STRA5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|22533283|gb|AAM99177.1|AE014203_24 glycyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 2603V/R] Length = 679 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 199/710 (28%), Positives = 337/710 (47%), Gaps = 74/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ L++ + ++ ++ + TP RL + +KGL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGQKMVKFLEDHRLSFETVQIFSTPRRLAVRVKGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLSVDD---IEFREVKGEEYVYVTKHETGKSAIDVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V + ++ +P +M W+ +F +IRP+ +++ +L ++ ++LD +I G Sbjct: 132 SVTEVLTELTFPVNMHWANN-----SFEYIRPVHTLVVLL-----DDQALELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF ++ S Y DL + V+ D + R+ I+N H + + + D Sbjct: 182 RISRGHRFLGSDT-EISSASSYEDDLRQQFVIADAKERQQMIVNQIHAIEEKKNISVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ F+GSFD+KYL +PEE++ ++K +Q+ FV R R+G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFLGSFDEKYLDVPEEVLVTSMKNHQRYFVVRDRDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EHIENVIKGNEKVLVARLEDGEFFWQEDQKLN--------------------IA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVALVDRAIVLSKADLC 423 + +L V FH KIG+ E + R++V+ + +A+ L D + V RA + K DL Sbjct: 340 DLVEKLK--QVTFHEKIGSLYEHMDRVKVISQYLAEKADLSDEEKLAVLRAASIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P ++ ++LADK Sbjct: 398 TGMVDEFDELQGIMGEKYALLAGEQPAVAAAIREHYMPTSADGELPETRVGAILALADKF 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ DIPL + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWDIPLDELVTNLYGLSFASLDYA 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + + + D+ EA+L + + I++ + L + A+ + Sbjct: 518 NQKEVMAFISARIEKMIGSK-VPKDIREAVLESDTYIVSLILEASQALVQKSKDAQYKVS 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + S+ + EK LY I + H Sbjct: 577 VESLSRAFNLAEK-----VTHSVLVDSSLFENNQEKALYQAILSLEL-------TEDMHD 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 D L ++ I FFD +V DD +++ NRL++L + V Sbjct: 625 NLDKLFALSPIINDFFDNTMVMTDDEKMKQNRLAILNSLVAKARTVAAFN 674 >gi|94994891|ref|YP_602989.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10750] gi|229558580|sp|Q1J5E1|SYGB_STRPF RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94548399|gb|ABF38445.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10750] Length = 679 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 341/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYARLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAVPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 626 --LEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKAIAAFNQL 676 >gi|322391031|ref|ZP_08064535.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 903] gi|321142261|gb|EFX37735.1| glycyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 903] Length = 704 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 204/713 (28%), Positives = 341/713 (47%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 41 PAYVVTPSEKQLGEKMAAFLDDNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 100 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 101 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 157 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ F +IRP+ +++ +L ++ +DLD +I Sbjct: 158 G-VPEVLASLTFPVSMHWANN-----TFEYIRPVHTLIVLL-----GDEALDLDFLDIHS 206 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ Sbjct: 207 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEADQGVQVQI 265 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 266 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGQLKPNFIS 325 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +V+GN +V+ ARLED FW+ DQ + Sbjct: 326 VRNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KI 364 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 365 EDLVAKL--AHVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEEKAAVARAAEIYKFDL 422 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 423 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 482 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 483 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYALSFDSLSY 542 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ +A+L N + +++ + L+E + + Sbjct: 543 DNQVEVLNFIKARVDKMMG--RTPKDIKDAVLAGSNFVVADMLEAAEALSEAAKTDGYKA 600 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + + EK L I D + S K Sbjct: 601 AVESLSRAFNLAEKA-----DASVAVDASLFENDQEKALAKAIEDL--ELTGSASDK--- 650 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V +D V++NRL+LL + V ++ Sbjct: 651 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLAGLVAKANAVAAFNQL 701 >gi|169832877|ref|YP_001694890.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae Hungary19A-6] gi|238688367|sp|B1ICQ5|SYGB_STRPI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|168995379|gb|ACA35991.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae Hungary19A-6] Length = 678 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------ILSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|148992641|ref|ZP_01822309.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP9-BS68] gi|168489636|ref|ZP_02713835.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP195] gi|147928658|gb|EDK79672.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP9-BS68] gi|183571932|gb|EDT92460.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP195] gi|332072269|gb|EGI82752.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA17570] Length = 678 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSELFENDQEKALAEAVETL-------VLSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|149011706|ref|ZP_01832902.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP19-BS75] gi|147764137|gb|EDK71069.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP19-BS75] Length = 678 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 324/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGS 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------ILSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|301794498|emb|CBW36937.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae INV104] Length = 678 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 325/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGS 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSELFENDQEKALAEAVETL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|225860757|ref|YP_002742266.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae Taiwan19F-14] gi|298254994|ref|ZP_06978580.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502571|ref|YP_003724511.1| glycyl-tRNA synthetase, subunit beta [Streptococcus pneumoniae TCH8431/19A] gi|254781868|sp|C1CQP4|SYGB_STRZT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225728048|gb|ACO23899.1| glycyl-tRNA synthetase beta chain (Glycine--tRNA ligasebeta chain) (GlyRS) [Streptococcus pneumoniae Taiwan19F-14] gi|298238166|gb|ADI69297.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae TCH8431/19A] gi|327389660|gb|EGE88005.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA04375] Length = 678 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 194/713 (27%), Positives = 327/713 (45%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVHIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|149007254|ref|ZP_01830912.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|307126956|ref|YP_003878987.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae 670-6B] gi|147761058|gb|EDK68026.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|306484018|gb|ADM90887.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae 670-6B] gi|332074227|gb|EGI84704.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA17545] Length = 678 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|168575932|ref|ZP_02721847.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae MLV-016] gi|194398749|ref|YP_002038109.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae G54] gi|238690835|sp|B5E642|SYGB_STRP4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|183578380|gb|EDT98908.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae MLV-016] gi|194358416|gb|ACF56864.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae G54] gi|332199520|gb|EGJ13595.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA41317] Length = 678 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 324/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGS 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|168486171|ref|ZP_02710679.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1087-00] gi|183570718|gb|EDT91246.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1087-00] Length = 678 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 330/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L ++ LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMVAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y +L + V+ DP R I++ ++ + G+ + Sbjct: 181 SRVSRGHRFLGKET-KIQSALSYEENLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|332073812|gb|EGI84290.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA41301] Length = 678 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 325/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGS 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ ++ + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKKIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLIYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|167585508|ref|ZP_02377896.1| glycyl-tRNA synthetase subunit beta [Burkholderia ubonensis Bu] Length = 699 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 200/715 (27%), Positives = 335/715 (46%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L +I + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLASRDLIEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAAGLPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYAAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + + ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + + Y L + V+ R+ I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAITHARAYADTLRDKGRVIAHFGDRKETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 K L R+ L +VV+H K+GT RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KTLADRVPLL--ANVVYHNKLGTTLARVERLEALAGEIAPAIGADAAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +P+ +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVAVACTEHYQPRFSGDALPSTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRVLLEKQLPLDLVSLLRLAHARFATVPDV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 ++ FF DRL+ L +R ++A+L L IV + + EF A+ E Sbjct: 527 AESTDAILAFFMDRLRGLLRERGYTAGEVDAVLSLNPTRLDDIVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P + AEK L+ ++ +Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSESGANGAVQPTLFVEAAEKALHEQLTAVTPRVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FFD V+VN DD +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDAFFDGVMVNADDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|168492544|ref|ZP_02716687.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC0288-04] gi|183573302|gb|EDT93830.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC0288-04] Length = 678 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 193/712 (27%), Positives = 323/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGS 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+ S Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIHSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------ILSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|28895307|ref|NP_801657.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes SSI-1] gi|161485738|ref|NP_665275.2| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS315] gi|73919751|sp|Q8K663|SYGB_STRP3 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|28810553|dbj|BAC63490.1| putative glycyl-tRNA synthetase, beta subunit [Streptococcus pyogenes SSI-1] Length = 679 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 200/713 (28%), Positives = 339/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYARLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAVPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVHVDPSLFENEQENTLFAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 626 --LEQVFVLSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|170079051|ref|YP_001735689.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. PCC 7002] gi|238692788|sp|B1XK79|SYGB_SYNP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169886720|gb|ACB00434.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7002] Length = 713 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 186/719 (25%), Positives = 328/719 (45%), Gaps = 71/719 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +L+E+ +EE+PA A L + L E + + Y TP RL + ++GL Sbjct: 1 MATYLIEVGTEELPADFVAAAIAQLKDRVSHSLTEYFLTPDGIEVYGTPRRLAVLIQGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 ++ EE GP G KA +GF R G++ +S +++ KGD + Sbjct: 61 DQQADREEEIKGPPAAAAFKEGQPTKAAEGFARKQGVE-LSALEVRPTE-KGDFVFVQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R ++L+ +V + + MRW+ + RP++ ++ + + Sbjct: 119 TLGRPTPEILQELVLGWFTALEGRRFMRWADGD-----LRFPRPIRWLVSLWNDAVLPLE 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ K + G I+ GHR + + + Y+ L++A V ++P+ R I+ Sbjct: 174 LVNGSGK-LEAGRISRGHRILHQGDVTLNNAADYVVTLQQAFVEVNPQVREEKIVAGVKA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ +G E DLL E++ LVE+ +G + ++L LP E+I + T+Q+ F R Sbjct: 233 AAAEIGGEAEMPADLLAEVVNLVEYPTAVVGDIEAEFLELPTEVITTVMVTHQRYFAVRD 292 Query: 295 RE--GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 R+ L FI +SN I GN RV+ ARL D F++ D + Sbjct: 293 RQDKTKLLPKFITISNGDPK-KSEIIAAGNGRVIRARLADGQFFYRADCDEH-------- 343 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 L+ + +L+ V F ++GT ++V RI + ++IA+ + AD Sbjct: 344 ------------LETYLPQLEA--VTFQEELGTMRDKVDRIMEISQQIAEQLGLSEADKE 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++ +L KADL T++V EFPELQG +G++YA++ E + + I EH PR + +P Sbjct: 390 IIASTAMLCKADLVTQMVYEFPELQGIMGQKYALVSGEAPAVAEGIFEHYLPRNADDILP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 V + D+LDTL++ + + PSGS DP+ALRRA II + + ++I L + + Sbjct: 450 QTLAGQVVGMGDRLDTLVSIFGLGMIPSGSSDPFALRRAANAIITVAWDAGLEIDLGELL 509 Query: 530 ED----------------QNLILFFHDRLKLYLHD-RDIRHDLIEAILRPEN-------D 565 + L FF R++ L D + I +DL+ A+L + Sbjct: 510 AQGAKDFVTAHPDKTSPLEALQSFFIQRIQTLLQDEKGIDYDLVNAVLGDDAEYTERALT 569 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE--KKNREISLEISPQYLLLEA 623 +LL + D L + K + R ++ A + + + I+P+ + Sbjct: 570 DLLDVGDRAAFLQSIRDDGQLAKIYATVNRSAKLAAKGNLSTDSLDPTGVINPEKFAQNS 629 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLVNVDDREVRD 679 E+ LYA + + + + + Y ++ D L ++ +E FF D VLV +D VR+ Sbjct: 630 ERDLYAGLVELVPTTEVARTERDYQKLIDGLAALAPTVERFFDGEDSVLVMAEDPAVRE 688 >gi|332200920|gb|EGJ14991.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA47901] Length = 678 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 324/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGS 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPVVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSELFENDQEKALAEAVETL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|326803489|ref|YP_004321307.1| glycine--tRNA ligase, beta subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326651577|gb|AEA01760.1| glycine--tRNA ligase, beta subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 697 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 206/731 (28%), Positives = 344/731 (47%), Gaps = 81/731 (11%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + +L+EI EE+PA+ +E + L E + Y ++ + TP R + +K Sbjct: 1 MNNHSYLIEIGLEEMPAQYVRSISEQFQERVENFLDENRLSYGSIETFATPRRFAVLVKE 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ EE GP G KA GF R GL TI D K+ + YL Sbjct: 61 LADRQSTFEEEAKGPAKRIAQDEAGNWTKAAMGFARGKGL-TIDDIYFKELKGEDYAYLT 119 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V R + +VL I + ++ +P SM W + F +IRP+ I+ +L Sbjct: 120 V-RSEGLNVVEVLADI-KNCVSEMNFPVSMHWDSHE-----FRYIRPVHWIVSLL----- 167 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++I ++ + GN++ GHRF +++ Y LE+A V++D + R+ I Sbjct: 168 DKEVIPFNVLAVEAGNLSRGHRFLHNESVEISHASLYEESLEKAAVIVDQDKRKQMIKEQ 227 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA ++ D+DLLEE+ +VE+ F+G FD+KYL LP ++ +++ +Q+ F Sbjct: 228 IEALAKENNYQVPLDQDLLEEVTQIVEYPTAFVGDFDEKYLSLPAPVLITSMREHQRYFA 287 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +EG L FI + N D + GN +V+ ARLEDA+ F + DQ + Sbjct: 288 VEDQEGKLLPHFIALRNGN-HDHIETVKNGNEKVLVARLEDAMFFLEEDQKH-------- 338 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI----------A 401 +D +L DV FHA+IG+ +++ R + + A Sbjct: 339 ------------TIDDFAQKL--TDVTFHAEIGSMKQKMERTGKIAHYLYENWAMHEVFA 384 Query: 402 QLIDAD-VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + D +DR + K DL T+IV EF ELQG IG+ YA E+ AI EH Sbjct: 385 GQLATDFTQEIDRTSAIYKFDLVTQIVDEFSELQGIIGEIYAKKAGEDPQVATAIREHYL 444 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P G +P + + + +++DKL+++I+F+AI + PSGS DP+ALRR +GI+ I+ Sbjct: 445 PSGNASELPQSPLGLLFAISDKLESIISFFAIGKIPSGSNDPFALRRQMIGILAILEAEH 504 Query: 521 IDIPLSQFIED-----------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + + Q ++D Q +I F DRLK L D++IR D+ +A + Sbjct: 505 LPLEWHQALKDIFDQVYDFDQNKQVELSQAIIQFLSDRLKNNLADKEIRFDISQAAREAK 564 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 ++LTI+ + LN + + + +RI I+ ++ E+ L ++ + Sbjct: 565 YIDVLTIIQSAELLNAHKEDEDYKDNVEAWQRINNIILKVSQEEVELPL-VNEDLFESNS 623 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E LY +SD + + + + ++ I FF+ +V D++++R+NRL+ Sbjct: 624 ESDLYQAVSDLRLD-------EGVEEAYEEITALTPIITQFFEDNMVFTDNQDIRNNRLA 676 Query: 684 LLQYIKNIILI 694 LL I I Sbjct: 677 LLSLIDQAITK 687 >gi|170699169|ref|ZP_02890222.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria IOP40-10] gi|170135894|gb|EDT04169.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria IOP40-10] Length = 699 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 337/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPESLLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|298491727|ref|YP_003721904.1| glycyl-tRNA synthetase subunit beta ['Nostoc azollae' 0708] gi|298233645|gb|ADI64781.1| glycyl-tRNA synthetase, beta subunit ['Nostoc azollae' 0708] Length = 733 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 188/741 (25%), Positives = 317/741 (42%), Gaps = 98/741 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP FLLE+ +EE+PA A + L+ + + + Y TP RL + + GL Sbjct: 1 MPAFLLEVGTEELPASFLSSAIVQWRSRIPQTLEANNLKTETVEVYGTPRRLAVLITGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+K EE GP G GF + G++ + +I+ KGD + Sbjct: 61 SQQPDKEEEIKGPSAQAAFKDGKPTPGAVGFAKKQGVE-LDAFEIRPTE-KGDFVFIQKK 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P R + ++L + P + + + MRW + + RP++ ++ +L + Sbjct: 119 TPGRPVAEILTELFPQWVWSLEGKRLMRWGSGDG-----RFSRPIRWLVALLDGD----- 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 ++ L+LK + I+ HR P P+ + Y+ L V++ PE R N I Sbjct: 169 VLPLELKNGDKTVKSDRISQAHRVLHPEPVSISHATEYVNTLRSGYVIVSPEERENIITE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 +G DLLEE LVE+ +G F+ ++L LP E+ + +Q+ F Sbjct: 229 QVKTAVQKLGGFTPIYPDLLEETTNLVEYPTAVVGKFEDEFLLLPTEVSTTVMVNHQRYF 288 Query: 291 VTR--TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 + L FI VSN + I GN +V+ ARL D F+K D Sbjct: 289 PVFKTSENHELLPNFITVSNGDPT-KSDIIAVGNEKVIRARLADGRFFYKAD-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---D 405 L+KPL+ + +L+ V F +G+ +V R+ + +I+Q + + Sbjct: 340 ------------LAKPLESFLPQLET--VTFQEDLGSVRAKVERVVNIAARISQQLQLGN 385 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 + + RA +L KADL T++V EFPELQG +G++YA+ E+ AI EH PR Sbjct: 386 NERQKIQRAALLCKADLVTQMVSEFPELQGTMGEKYALASAEDSEVALAIYEHYLPRYAS 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL-------- 517 +N P V+LAD+LDTL++ + + KPSGS DP+ALRRA II+II Sbjct: 446 DNFPRTITGKVVALADRLDTLVSIFGLGLKPSGSSDPFALRRAANAIIKIICSQSSDSTH 505 Query: 518 ---ENKIDIPLSQFIEDQNL-----------------ILFFHDRLKLYLHDR-------D 550 ++ + + L+ +E FF R++ + + Sbjct: 506 QDYKDGLTLDLAGLLEQTATEFAAAFNKDRDSLIKVLQDFFIQRIRTLFQEAEVQIFIDE 565 Query: 551 IRHDLIEAILRPEN--------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI 602 I +DL+ A+L + +LL + D +L + ++ +K + R ++ A Sbjct: 566 IDYDLVNAVLGENDPEYTERALQDLLDVRDRALYLQQIRNNGTLDKIYETVNRSTRLAAQ 625 Query: 603 E--EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 + E + + P+ +E Y + + Q + + Y + L I Sbjct: 626 GNLNFQQLEPTAVVKPELFQKSSESAFYNALLELVPQTQAAQRTRNYQILIAALEKIAPT 685 Query: 661 IEIFF---DQVLVNVDDREVR 678 + F D VLV + E++ Sbjct: 686 VSKLFDGEDSVLVMDLNPEIK 706 >gi|322376926|ref|ZP_08051419.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M334] gi|321282733|gb|EFX59740.1| glycyl-tRNA synthetase, beta subunit [Streptococcus sp. M334] Length = 678 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 193/712 (27%), Positives = 325/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + L+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMTAFLKENRLSFEAIQTFSTPRRLAVRVTDLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I G Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLLDEEE-----FDLDFLDIKGG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRAQFVIADPREREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-EHLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQIAILLAEKAGLSADETIDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGETPAVAAAIREHYMPTSAEGELPESKVGAILAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFNSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLVGSNFVVADMLEAASALVEASKEENFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDHEKSLAEAVDTL-------VLSGTASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L ++ + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSHLTQKAAKLARFNQI 675 >gi|294624286|ref|ZP_06702992.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601416|gb|EFF45447.1| glycyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 720 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 198/756 (26%), Positives = 329/756 (43%), Gaps = 93/756 (12%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A ++ L++ GV + + TP RL + Sbjct: 1 MSEHFPLLIELGTEELPVKALPGLARAFFDGVLSGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAQGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGS 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + YI L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGAVSLAAPGEYIDALRSAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAATQAGGSARISDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+G+ ++V+R+ L + IA + AD Sbjct: 348 G----------------------EGLASVTYQAKLGSVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDESYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-- 526 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKYW 505 Query: 527 -----------------------------------------QFIEDQNLILFFHDRLKLY 545 + E + F DRL+ Y Sbjct: 506 IVFSHILAARAYGELGLDGQVDKLKKELNESTAEQMVDRPIEQNELKFFYDFIVDRLRGY 565 Query: 546 LHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK 605 D+ + A+ +L I + F + E + KRI IL K Sbjct: 566 YADKGVPATHFNAVAELRPASLYDFDRRIDAIGIFAQLPEAEALAAANKRIRNILR---K 622 Query: 606 KNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF 665 EI +I L AE+ L + +++ Y + L + ++ FF Sbjct: 623 VEGEIPGDIDTTLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARLARLRPQVDAFF 682 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D V+VN DD ++R NRL+LL+ + + V ++ + Sbjct: 683 DGVMVNADDPQLRANRLALLKKLGERLGSVAAIEHL 718 >gi|303255015|ref|ZP_07341092.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS455] gi|303259074|ref|ZP_07345053.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP-BS293] gi|303261754|ref|ZP_07347701.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS292] gi|303264427|ref|ZP_07350347.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS397] gi|303266741|ref|ZP_07352623.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS457] gi|303269166|ref|ZP_07354944.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS458] gi|301802205|emb|CBW34951.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae INV200] gi|302598022|gb|EFL65091.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS455] gi|302637334|gb|EFL67822.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS292] gi|302640017|gb|EFL70473.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP-BS293] gi|302641290|gb|EFL71659.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS458] gi|302643730|gb|EFL73995.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS457] gi|302646239|gb|EFL76466.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS397] Length = 678 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEIPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMNFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|332522303|ref|ZP_08398555.1| glycine--tRNA ligase, beta subunit [Streptococcus porcinus str. Jelinkova 176] gi|332313567|gb|EGJ26552.1| glycine--tRNA ligase, beta subunit [Streptococcus porcinus str. Jelinkova 176] Length = 679 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 200/710 (28%), Positives = 336/710 (47%), Gaps = 74/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L+ + Y+ ++ + TP RL + + GL+ + +E+ GP Sbjct: 15 PAYVVTASEKQLGQKMAAFLESNRLSYERIQTFSTPRRLAVRVLGLADKQEDLVEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T I+ KG+ Y+ V + K + Sbjct: 75 SKKIALDDQGNFSKAAQGFVRGKGLTTDD---IEFREIKGEEYVYVTKNEKGKSTQEVLM 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SM W++ +F +IRP+ ++ +L ++++++ +I Sbjct: 132 GIPDLLASLTFPVSMHWASN-----SFEYIRPVHTLTVLL-----DDQLLEMPFLDISSA 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 + GHRF I +Q+ Y DL V+ DP R+ IL+ L + + D Sbjct: 182 RYSRGHRFLGKE-IAIQNALSYEADLRSQSVIADPLERQQMILDQIKGLEKEHHIYVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ F+GSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 DDLLNEVLNLVEYPTAFLGSFDAKYLSVPEEVLVTSMKNHQRYFVVRDQSGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N +++GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGN-DQYIENVIKGNEKVLIARLEDGEFFWREDQKL--------------------KIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L+ V FH KIG+ + + R V+ K +A+ + + V+RA + K DL Sbjct: 340 DLVAKLE--HVTFHEKIGSLAQHMERTGVIAKYLAEKANLSVEETKAVERASQIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGLMGEKYALLAGEDSLVATAIREHYLPSSADGVLPETKVGAILALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ Q Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEAFGWAIPMDQLIANCYQLSFASLSYS 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R++ + I D+ EA+L N + ++ + L E + + + Sbjct: 518 HQEEVMAFIAARIEKMM-GNGIPKDIREAVLASTNYQVPEMLATAQALLEASKTDQYKMA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + + R+F + + + K + ++P + EK+LY ISD Sbjct: 577 VENLSRVFNLASKVDAK-----VNVNPSLFENQEEKQLYQAISDLQLE-------GNATH 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + L ++ + I +FF +V +D VR+NRL+LL + V Sbjct: 625 KLEQLFALTDKIAVFFAHTMVMAEDIMVRNNRLALLTELMQKAGTVAQFN 674 >gi|225857101|ref|YP_002738612.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae P1031] gi|254781867|sp|C1CLH4|SYGB_STRZP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225724579|gb|ACO20431.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae P1031] Length = 678 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 324/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGS 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEYFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|168493376|ref|ZP_02717519.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC3059-06] gi|183576507|gb|EDT97035.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC3059-06] Length = 678 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 +V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKASLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|149019423|ref|ZP_01834785.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP23-BS72] gi|147931293|gb|EDK82272.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP23-BS72] Length = 678 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 329/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 GRVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEIPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+A+ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFAVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMNFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|148997465|ref|ZP_01825070.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP11-BS70] gi|307068124|ref|YP_003877090.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae AP200] gi|147756520|gb|EDK63561.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP11-BS70] gi|306409661|gb|ADM85088.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae AP200] Length = 678 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 324/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGS 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKASLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|289666195|ref|ZP_06487776.1| glycyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 731 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 196/767 (25%), Positives = 329/767 (42%), Gaps = 104/767 (13%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G + + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFEGVLSGLEKRGVAITRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAAGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P ++L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTAELLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLFGT 173 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 174 E-----VIPAELLGVRGDRITRGHRFMHEGTVSLAAPGDYVEALRAAHVLVDPDARRTRI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 IEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDEDLKQGLQAM 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 + V + AK+G E+V R+ L + IA I AD Sbjct: 348 GD----------------------GLASVTYQAKLGNVAEKVERVAKLAEMIAPQIGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VHARRAAQLAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ + Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDVKAT 505 Query: 529 IEDQNLIL----------------------------------FFHDRLKLYLHDRDIRHD 554 + +L F DRL+ Y D+ + Sbjct: 506 LVIAVKLLPWDRLVRKATLKDEETIAAIDSAQYAQLASEIFDFILDRLRGYYADKGVPAT 565 Query: 555 LIEAI--------------------LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 A+ L + +L I + F + + E + K Sbjct: 566 HFNAVAALFSVAPEGAPTAHGVGASLGATHGSLYDFDRRIDAIGSFATLPEAEALAAANK 625 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 RI IL K EI +I L AE+ L + +++ Y + L Sbjct: 626 RIRNILR---KVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGDALHRHDYVAVLARL 682 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ + Sbjct: 683 ARLRPQVDAFFDAVMVNAEDPQLRANRLALLKKLGDRLGSVAAIEHL 729 >gi|161936376|ref|YP_140919.2| glycyl-tRNA synthetase subunit beta [Streptococcus thermophilus CNRZ1066] Length = 678 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 200/712 (28%), Positives = 334/712 (46%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTIDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SM W+ +F +IRP+ +++ +L ++ ++LD I G Sbjct: 132 GIPEVLASLTFPVSMHWANN-----SFEYIRPVHTLIVLL-----GDEALELDFLGIKSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ + Sbjct: 182 RVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQIE 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI V Sbjct: 241 EGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +V+GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 340 DLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSYD 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 518 NQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKAA 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+ + + EK L + S K Sbjct: 576 VESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQAAESL--ELTGSASDK---- 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 625 -LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 675 >gi|194367754|ref|YP_002030364.1| glycyl-tRNA synthetase subunit beta [Stenotrophomonas maltophilia R551-3] gi|194350558|gb|ACF53681.1| glycyl-tRNA synthetase, beta subunit [Stenotrophomonas maltophilia R551-3] Length = 691 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 201/721 (27%), Positives = 332/721 (46%), Gaps = 61/721 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLYLKGLSP 61 L+E+ +EE+P + A+ ++ L++ G + + R TP RL + L G+ Sbjct: 7 LLIELGTEELPVKALPGLAQAFFDGVVDGLRKRGVALELGDARPLSTPRRLAVLLPGVGL 66 Query: 62 HSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 PE+ E LGP G KA+ GF G+ + K KG+ ++ Sbjct: 67 EQPEQHSEVLGPYLNIALDAEGLPTKALQGFAAKAGIDWTALE--KTSDNKGERFVHRAV 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P +L I+ AI +P PK MRW A+ + RP ++ + A Sbjct: 125 TPGASTASLLPEILREAIAAMPIPKPMRWGDH-----AWGFARPAHWLVLLHGAN----- 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ +L + G ++ GHRFH + + Y+ L A VL+DP RR I+ + Sbjct: 175 VVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVLVDPSERRARIVAEVEA 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 235 AAAKAGGSARITDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQKFFPVLD 294 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G L FI ++NI++ D A + +G RV+ R DA F+ D LK+ Sbjct: 295 DSGTLTEKFIGIANIESKD-VAEVAKGYERVIRPRFADAKFFFDED---------LKQGL 344 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 + L V + AK+G+ ++V+R+ L + IA + AD A RA Sbjct: 345 VSMGDGLKT-------------VTYQAKLGSVADKVARVAALAEVIAPQVGADAAQAKRA 391 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 L+K DL + +V EFPELQG G+ YAV E AI+E +PR +++ + + Sbjct: 392 AQLAKNDLQSRMVNEFPELQGIAGRHYAVAGGEAEEVALAIDEAYQPRFGGDDIALSPLG 451 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 +++A+++DTL +A KP+G+KDP+ALRR LG+ R I+E+ ++ L + N Sbjct: 452 KVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRALLASANA 511 Query: 535 --------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F DRLK Y D+ + A+ + +L + + F Sbjct: 512 GLAARNVQADVGELYDFILDRLKGYYSDKGVPATHFNAVAELKPTSLYDFDRRLDAIGTF 571 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KRI IL E +I +I P L +AE+ L ++ Sbjct: 572 AALPEAEALAAANKRIRNILRKAE---GDIPGQIDPALLQEDAERALAEAVTAAIDDTGT 628 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 S+ K Y + L + + ++ FFD V+VN DD +R NRL+LL + + V ++ Sbjct: 629 SLQQKDYVAVLARLARLRQQVDAFFDGVMVNADDLALRGNRLALLTMLGERLGKVAAIEH 688 Query: 701 I 701 + Sbjct: 689 L 689 >gi|171317308|ref|ZP_02906504.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MEX-5] gi|171097507|gb|EDT42345.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MEX-5] Length = 699 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 202/715 (28%), Positives = 338/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + AS G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHAS--GDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGANGAVQPALLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|307721215|ref|YP_003892355.1| glycyl-tRNA synthetase subunit beta [Sulfurimonas autotrophica DSM 16294] gi|306979308|gb|ADN09343.1| glycyl-tRNA synthetase beta chain [Sulfurimonas autotrophica DSM 16294] Length = 672 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 190/716 (26%), Positives = 333/716 (46%), Gaps = 68/716 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K +++ +L++ ++ Y+TP RL ++ + Sbjct: 5 LLIEIGVEELPAVPLLKEMKNIERKYADILEKYSLL-SEFEFYYTPRRLVMWHREFKTGQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + EE G + G KA +GF R G+ + + K +V Sbjct: 64 DDSAEEFFGAPLAVAYKDGTPTKAAEGFARKCGVS-LEELSTANKGGK-EVLYYKKDVAG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + ++L I+ ++ + + KSMRW + H S+IRP++ + L + ++ Sbjct: 122 KPSAELLPEIIYSWLKSLDFGKSMRWGSLHE-----SFIRPIRWVNVQL-----DDTLVP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + + IT HR +P+++ Y L+ V L + R IL D + Sbjct: 172 MYMYGVDSSKITRVHRIANFNPVEITGAKDYFETLKNGGVTLFQQEREEKILGDIKAIEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + D DL E++ + E +GSFD+ +L LP E+I ++K +Q+ F ++G Sbjct: 232 DNSVNVEIDDDLFAEVVAITENPTALLGSFDEAFLRLPPEVIITSMKEHQRYFPVF-KDG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F++VSN + D ++ GN RV+ RL D L F+ D N + L++ Sbjct: 291 QLVNKFVVVSNALSDDFSE-VIAGNERVLRPRLADGLFFYDNDLKNGLSTKGLEK----- 344 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVALVDRAI 415 V F +G+ +++ R + + DA ++RAI Sbjct: 345 -------------------VAFFKGLGSVADKIEREEKIADALYDMYQPDAKKEDLNRAI 385 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL +E+V EF ELQG +G YA EN + AI+E P G +P+ +S Sbjct: 386 ELAKADLMSEMVYEFTELQGLMGYYYAKEAGENDAVALAIKEQYLPEGEESELPSTPLSA 445 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----LSQFIED 531 V+++ KLDTL+ +++NE P+GS+DP+ALRRA GIIRI+ E + L + ++ Sbjct: 446 IVAMSIKLDTLLGLFSVNEIPTGSRDPFALRRAVNGIIRIVNEYGFEFDIVKTLKELSKN 505 Query: 532 QNLIL------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAK 585 + I F +R++ Y + +IEA+L + LL + I LN +S Sbjct: 506 YDAIDLEKLENFILERIRRYYK---VNPSIIEAVLASDERELLALGRKIAALNTLVNSEG 562 Query: 586 GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHK 645 ++ + KR+ I + + L + EAEK LY + + ES Sbjct: 563 FDEVSSTFKRVANIT---KDIDLNGDLNVDESLFEEEAEKTLYKRYKEVTSKTYES---- 615 Query: 646 RYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + D L + +++FFD V+VN +D ++++NR +L+ I IL + +++++ Sbjct: 616 -YEEELDALLGLKPELDLFFDSVMVNAEDDKIKNNRKALVASIYKSILNIADIKEV 670 >gi|134296894|ref|YP_001120629.1| glycyl-tRNA synthetase subunit beta [Burkholderia vietnamiensis G4] gi|134140051|gb|ABO55794.1| glycyl-tRNA synthetase beta chain [Burkholderia vietnamiensis G4] Length = 699 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 198/715 (27%), Positives = 342/715 (47%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +P++ + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPDRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G ++ ++++ K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPDLTIAELERAHDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + ++K+P PK M + + ++RP+ + + ++++ + + Sbjct: 139 LQAALDETLEKLPIPKVMTYQRPDG--TDVKFVRPVHRLTVL-----HDDRVVPVAAFGV 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHARAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPDALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDIAGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI+ G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIETKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL +R+ L +VV+H K+G+ RV R+ L +IA I ADVA RA L+KADL Sbjct: 349 KPLAERVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADVAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVSLLRTAHARFEQVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AEATDAIFAFFMDRLRGLLRERGYTAGEVDAVLSLNPTRVDDLVARLDAVREFTRLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL +K ++ + P L+ AEK L+ ++ H+Q +D + Y Sbjct: 587 ALAAANKRISNIL---KKSEGGVNGAVQPALLVEAAEKALHEQLAAVTPHVQSQLDARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|19746599|ref|NP_607735.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS8232] gi|25009327|sp|Q8NZW7|SYGB_STRP8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|19748816|gb|AAL98234.1| putative glycyl-tRNA synthetase (beta subunit) [Streptococcus pyogenes MGAS8232] Length = 679 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 339/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAAPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 626 --LEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|116627393|ref|YP_820012.1| glycyl-tRNA synthetase subunit beta [Streptococcus thermophilus LMD-9] gi|122268006|sp|Q03LV6|SYGB_STRTD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|116100670|gb|ABJ65816.1| Glycyl-tRNA synthetase, beta subunit [Streptococcus thermophilus LMD-9] gi|312277908|gb|ADQ62565.1| Glycyl-tRNA synthetase beta subunit [Streptococcus thermophilus ND03] Length = 678 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 201/712 (28%), Positives = 335/712 (47%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SM W+ +F +IRP+ +++ +L ++ ++LD I G Sbjct: 132 GIPEVLASLTFPVSMHWANN-----SFEYIRPVHTLIVLL-----GDEALELDFLGIKSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H +++ + D Y DL V+ D + R N I + + G+++ + Sbjct: 182 RVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIEAEQGVQVQIE 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI V Sbjct: 241 EGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +V+GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 340 DLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSYD 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 518 NQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKAA 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+ + + EK L V + S K Sbjct: 576 VESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQVAESL--ELTGSASDK---- 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 625 -LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 675 >gi|190576418|ref|YP_001974263.1| glycyl-tRNA synthetase subunit beta [Stenotrophomonas maltophilia K279a] gi|190014340|emb|CAQ47987.1| putative glycine-tRNA synthetase, beta subunit [Stenotrophomonas maltophilia K279a] Length = 691 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 199/723 (27%), Positives = 333/723 (46%), Gaps = 61/723 (8%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEG--VIYQNMRQYWTPHRLFLYLKGL 59 L+E+ +EE+P + A+ ++ L++ G + + R TP RL + L G+ Sbjct: 5 SPLLIELGTEELPVKALPGLAQAFFDGVVEGLRKRGVALELGDARPLSTPRRLAVLLPGV 64 Query: 60 SPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 PE+ E LGP G KA+ GF G+ + K KG+ ++ Sbjct: 65 GLEQPEQHSEVLGPYLNIALDAEGQPTKALQGFAAKAGIDWTALE--KTTDNKGERFVHR 122 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P +L I+ AI +P PK MRW A+ + RP ++ + A Sbjct: 123 AVTPGASTASLLPEILREAIAAMPIPKPMRWGDH-----AWGFARPAHWLVLLHGAN--- 174 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++ +L + G ++ GHRFH + + Y+ L A VL+DP RR I+ + Sbjct: 175 --VVEAELFGLQAGRVSRGHRFHHDQAVSLAQPQDYVEALRAAFVLVDPSERRARIVAEV 232 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A+ G D LE+++ LVEW + SF++ +L +P+E + T++ NQK F Sbjct: 233 EAAAAKAGGSARITDDNLEQVVNLVEWPSAVLCSFERAFLAVPQEALIETMEINQKFFPV 292 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 G L FI ++NI++ + A + +G RV+ R DA F+ D LK+ Sbjct: 293 LDAAGTLTEKFIGIANIESKN-VAEVAKGYERVIRPRFADAKFFFDED---------LKQ 342 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L V + AK+G+ ++V+R+ L + IA + AD A Sbjct: 343 GLVSMGEGLKT-------------VTYQAKLGSVADKVARVAALAEVIAPQVGADAAQAR 389 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA L+K DL + +V EFPELQG G+ YAV E+ AI+E +PR +++ + Sbjct: 390 RAAELAKNDLQSRMVNEFPELQGIAGRHYAVAGGESAEVALAIDEAYQPRFGGDDIALSP 449 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + +++A+++DTL +A KP+G+KDP+ALRR LG+ R I+E+ ++ L + Sbjct: 450 LGKVLAIAERVDTLAGGFAAGLKPTGNKDPFALRRNALGLARTIIESGFELDLRALLASA 509 Query: 533 NL--------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 N F DRLK Y D+++ A+ + +L + + Sbjct: 510 NAGLAARNVQADVGELYDFILDRLKGYYGDKNVPATHFNAVAELKPVSLYDFDRRLDAIG 569 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + + E + KRI IL E +I +I P L +AE+ L ++ Sbjct: 570 TFAALPEAEALAAANKRIRNILRKAE---GDIPAQIDPALLQEDAERALAEAVTAAIDDT 626 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 S+ K Y + L + ++ FFD V+VN +D +R NRL+LL + + V + Sbjct: 627 GASLHQKDYVAVLARLARLRPQVDAFFDGVMVNAEDPALRGNRLALLTMLGERLGKVAAI 686 Query: 699 QKI 701 + + Sbjct: 687 EHL 689 >gi|86607462|ref|YP_476225.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. JA-3-3Ab] gi|86556004|gb|ABD00962.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. JA-3-3Ab] Length = 730 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 197/754 (26%), Positives = 324/754 (42%), Gaps = 87/754 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLE+ EE+PA A E + L E + + M+ + TP RL + L+GL Sbjct: 1 MVAYLLEVGCEELPASFVDSALEQWRTGIPASLAEAHLQAEQMQLFGTPRRLSVLLQGLP 60 Query: 61 PHSPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP V A + F + G+ S +I++ KG AV R Sbjct: 61 TQQPDRTLEVKGPPVQVAYQDGRLTPAGEKFAQKQGVDPGS-LEIRQ-VGKGSFVFAVQR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R VL+ + P I + + MRW + RP++ ++ + +++ Sbjct: 119 VRGRPTAAVLQELAPTWITSLSGERLMRWGYGD-----LKFPRPIRWLVSLW-----EDQ 168 Query: 175 IIDL--------DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++ L L + G ++ GHR + ++ + Y++ ++EA V DP R Sbjct: 169 VLPLLWPTSEGNPLPGLVAGRVSRGHRVLGSQQVVLERAESYVQQMQEAGVSPDPTAREA 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I + +LA V E LL E++ LVEW +G F+ ++L LP +I + T+ Sbjct: 229 YIQAEVTKLARQVNGEAQIPAPLLREVVHLVEWPTAVLGRFEPEFLRLPPAVIETVMITH 288 Query: 287 QKCFVTRT--REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 Q+ F R L FI +SN I GNSRVV ARL DA F++ D+ Sbjct: 289 QRYFPVRDGRDPRKLLPYFITISNGDPR-QSERIGAGNSRVVRARLADARFFYEEDRRI- 346 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 PL QR+ RL V F +G+ ++V RIR + + IA + Sbjct: 347 -------------------PLAQRVERLQA--VTFAEGLGSMRDKVERIRHISRLIAAAL 385 Query: 405 DADV---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + D ALVDR L KADL T++V EFPELQG +G EYA E + + IE+H P Sbjct: 386 NLDPQEQALVDRTAYLCKADLVTQMVYEFPELQGIMGAEYARQDGEPEAVAEGIEQHYWP 445 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 G E +P + V AD+LDTL+ + + + P+GS D +ALRRA ++ I + Sbjct: 446 LGAGEALPASLTGRVVGWADRLDTLVGMFRLGQIPTGSSDRFALRRAANSLVLIAWDAGW 505 Query: 522 DIPLSQFIED--QNLILFFHDRLKLY------------LHDRDIRHDLIEAIL------- 560 + ++ Q+ LK ++ I +DL+ A++ Sbjct: 506 TFDFNSLLQRVVQDYAAGDEKTLKALQEFLLQRLQILLQEEKRIDYDLVRAVVGDPEALQ 565 Query: 561 ----------RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNR 608 R NL + ++L ++ + + R ++ A + Sbjct: 566 EGEPAKSDLPRRALANLPLTLLRAEYLQHLRATGELADLYPTLNRCARLAAQGDLDSAVL 625 Query: 609 EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 + + + L AE+ LY E + + + L + ++ FF+ V Sbjct: 626 DPAAAVDADLLQEAAERELYEACQRVYRLGVEPALQGDFTPLVEGLQAAAPAVDRFFEAV 685 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 LV D +R NRL+LL ++N ++ ++ +V Sbjct: 686 LVMDPDPRLRANRLNLLGVLRNQSRLLGDMGAVV 719 >gi|161611293|ref|YP_139030.2| glycyl-tRNA synthetase subunit beta [Streptococcus thermophilus LMG 18311] Length = 678 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 199/712 (27%), Positives = 334/712 (46%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLGENRLSYESIQTFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKSAKEVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SM W+ +F +IRP+ +++ +L ++ ++LD I G Sbjct: 132 GIPEVLASLTFPVSMHWANN-----SFEYIRPVHTLIVLL-----GDEALELDFLGIKSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H +++ + D Y DL V+ + + R N I + + G+++ + Sbjct: 182 RVSRGHRFLG-HEVEITNADSYEEDLRTVYVIANSKERENMIREQIKAIEAEQGVQVQIE 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ FMG FD KYL +PE+++ +++T+Q+ FV R +G L FI V Sbjct: 241 EGLLNEVLNLVEYPTTFMGGFDTKYLDVPEDVLVTSMETHQRYFVVRDLDGRLKPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +V+GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNA-EHLENVVRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 340 DLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEKAGLTAEEKAAVARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDEAVATAIREHYLPDSADGALPETKVGAILALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYGLSFDSLSYD 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 +I F R+ + D+ EA+L N + +++ + L+E + + Sbjct: 518 NQAEVIRFIKARVDKMMGS--TPKDIKEAVLSGSNFVVADMLEAAEALSEAAKTDGYKAA 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + + S+ + + EK L + S K Sbjct: 576 VESLSRAFNLAEKA-----DTSVAVDASLFENDQEKALAQAAESL--ELTGSASDK---- 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V DD V++NRL+LL + V ++ Sbjct: 625 -LAQLFVLSPVIDAFFDNTMVMADDVAVKNNRLALLSALVAKAKTVAAFNQL 675 >gi|172061660|ref|YP_001809312.1| glycyl-tRNA synthetase subunit beta [Burkholderia ambifaria MC40-6] gi|171994177|gb|ACB65096.1| glycyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MC40-6] Length = 699 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 201/715 (28%), Positives = 336/715 (46%), Gaps = 61/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 + P G + L + G +S +++ K + + + D Sbjct: 79 VLPVSVALDAEGRPTAPLAKKLAALGHPNLSIADLERAQDGKAEAFFVNYSAAGATLADG 138 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + + K+P PK M + S ++RP+ + + ++++ + I Sbjct: 139 LQAALDETLAKLPIPKFMTYQRPDG--SDVKFVRPVHRLTVL-----HDDRVVPVTAFGI 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGLE 242 G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 192 DAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGDT 249 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 250 VVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRSR 309 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSNI G I++GN RVV RL DA F+++D+ Sbjct: 310 FLIVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDKK-------------------- 348 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 KPL R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KADL Sbjct: 349 KPLADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKADL 406 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G YA E A EH +PR + +PT +S V+LADK Sbjct: 407 LTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALADK 466 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN--------- 533 L+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 467 LETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPGV 526 Query: 534 ------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + FF DRL+ L +R ++A+L + +V + + EF A+ E Sbjct: 527 AESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEAE 586 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 + KRI IL K + + P L+ AEK L+ ++ H+Q ++ + Y Sbjct: 587 ALAAANKRISNILR---KSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARAY 643 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 644 TGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|115352805|ref|YP_774644.1| glycyl-tRNA synthetase subunit beta [Burkholderia ambifaria AMMD] gi|115282793|gb|ABI88310.1| glycyl-tRNA synthetase beta chain [Burkholderia ambifaria AMMD] Length = 699 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 202/716 (28%), Positives = 339/716 (47%), Gaps = 63/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L ++ + +Y TP RL + ++ + +PEK + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLVEGELVFERYATPRRLAVVVQNVRAVAPEKQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P G + L + G +I+D + +D K + + + D Sbjct: 79 VLPVSVALDAEGKPTAPLAKKLAALGHPHLSIADLERAQD-GKAEAFFVNYSAAGATLAD 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L+ + + K+P PK M + + ++RP+ + + ++++ + Sbjct: 138 GLQAALDETLAKLPIPKFMTYQRPDG--TDVKFVRPVHRLTVL-----HDDRVVPVTAFG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGL 241 I G+ T GHRF + + +Q Y L + V+ RR I + A G Sbjct: 191 IDAGDTTLGHRFLSDGLVAIQHAHAYADTLRDKGRVIAHFADRRETIRTQLNEHA--NGD 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 TVVMPEALLDEVTSLVEWPVVYPCRFEDEFLQVPQECLILTMQTNQKYFALTDVGGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI G I++GN RVV RL DA F+++D+ Sbjct: 309 RFLIVSNIDTKTPGE-IIEGNERVVRPRLADAKFFFEQDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 KPL R+ L +VV+H K+G+ RV R+ L +IA I AD A RA L+KAD Sbjct: 349 -KPLADRVPLL--ANVVYHNKLGSALARVERLEALAGEIAPAIGADAAHAKRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +PT +S V+LAD Sbjct: 406 LLTDMVGEFPELQGTMGTYYARHDGEPDDVALACAEHYQPRFSGDALPTTPVSTAVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------- 533 KL+T++ W I P+G KDP+ALRR LG++R++LE ++ + L + + Sbjct: 466 KLETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDLVALLRTAHARFEGVPG 525 Query: 534 -------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + FF DRL+ L +R ++A+L + +V + + EF A+ Sbjct: 526 VAESTDAIFAFFMDRLRGLLRERGYSAGEVDAVLSLNPTRVDDLVARLDAVREFTLLAEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + KRI IL +K + + P L+ AEK L+ ++ H+Q ++ + Sbjct: 586 EALAAANKRISNIL---KKSEGGANGTVQPTLLVEAAEKALHEQLAAVTPHVQSQLEARA 642 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 643 YTGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLFALHQQMNCVADISKLA 698 >gi|221194456|ref|ZP_03567513.1| glycyl-tRNA synthetase, beta subunit [Atopobium rimae ATCC 49626] gi|221185360|gb|EEE17750.1| glycyl-tRNA synthetase, beta subunit [Atopobium rimae ATCC 49626] Length = 697 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 205/731 (28%), Positives = 329/731 (45%), Gaps = 73/731 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLEI +EE+P+ KA +++ L E G+ + R TP RL Y+K ++ Sbjct: 5 KDFLLEIGTEEMPSAPLLKAVAQYKKLIVSGLDEAGLAHGEARIISTPRRLSAYVKDVAL 64 Query: 62 HSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E E GP+ G KA GF R G+ S+ + D + A Sbjct: 65 ATEEINEVMRGPKCEIAFDAEGNPTKAALGFARKAGMDA-SELTRRVDDDGHEYVFAQRI 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 P +L + I + WP+S RW +TH ++RP++ I +L E Sbjct: 124 IPSVSAIKILSELSERIIPAIDWPRSQRWGSTHE-----RFVRPIRWICALLGTE----- 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + ++ N T GHR V HY + LE A V L E RR+ IL+ R Sbjct: 174 VVPVTYADVISSNTTQGHRVLGSGTHVVDESSHYEQVLEAAYV-LSAERRRSVILDGIAR 232 Query: 235 LASA-VGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + G + + +L+E+I L EW V +G+FD+++L +P E+I ++ +NQ+ F Sbjct: 233 IEEERPGFHVDTPQKVLDEVINLTEWPSVLVGTFDEEFLKVPHEIITESMLSNQRYFPIY 292 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G L F++VSN + ++ GN RVV ARL+DA F++ D Sbjct: 293 DANGELTREFVIVSNGNPA-CSQQVIDGNERVVRARLDDAKFFFEED------------- 338 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD----VA 409 L LD+ L DVVF K+GT ++V RI + +AQ + V Sbjct: 339 -------LKHSLDEFTGELS--DVVFQEKLGTVLQKVERIEKIAAFLAQADSENDDTVVE 389 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSKADL ++ V EF QG +G YA E+ DAI EH +PR + +P Sbjct: 390 HAHRAAHLSKADLVSQAVVEFTSQQGVMGGYYAKAAGESPDVADAIREHYRPRFAGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------LE 518 + I V+ ADKLDT+ +AI+E P+GS DPYA+RRA +G+I ++ + Sbjct: 450 SGPIGRYVAAADKLDTICGLFAIDEPPTGSSDPYAVRRAAIGVIALLRTMPNVRLKDCIR 509 Query: 519 NKIDIPLSQ------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 +D+ Q + + +F RL D I + I+A+ + + Sbjct: 510 YALDLYTEQGLQFDTVKVQREVEAYFLGRLVTIARDEKISQEAIDAVAHINVIDPEEFLR 569 Query: 573 LIKHLNEFF--SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 + L++ E ++ R ++ + + +++ L +E+ L Sbjct: 570 RTRALDDARIEDPENFENLAIAYNRASKL------GDISLGTDVNESIL-TASEQALLDA 622 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + ++Q+++ + L + +PI+ FFD VLV DD VR NRL LL Sbjct: 623 CKEGEKNVQDALTDNDFRSATRALGKLRKPIDKFFDDVLVMDDDTTVRGNRLRLLNRFTQ 682 Query: 691 IILIVINVQKI 701 + V ++ + Sbjct: 683 VFEHVADIGAL 693 >gi|168483914|ref|ZP_02708866.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|172042754|gb|EDT50800.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|332200037|gb|EGJ14110.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA47368] Length = 678 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLLDEEE-----FDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF K+QS Y DL + V+ DP R I++ + G+ + Sbjct: 181 GRVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEVKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEIPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMNFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|163738407|ref|ZP_02145822.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis BS107] gi|161388328|gb|EDQ12682.1| glycyl-tRNA synthetase subunit beta [Phaeobacter gallaeciensis BS107] Length = 754 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 240/579 (41%), Positives = 332/579 (57%), Gaps = 26/579 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ +AAEDL + L E G+ Y TP RL L ++GL Sbjct: 1 MPDLLIELFSEEIPARMQARAAEDLKKRMTDGLVEAGLTYAGAHALSTPRRLTLAMEGLL 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 HSP EER GP+VGA KAI+GFLR G+ + +D KG VY A++ KP R Sbjct: 61 EHSPTVREERKGPKVGAPDKAIEGFLRGAGVTRDQLEE--RDTPKGAVYFALIEKPGRPA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ ++ I+ PW KSMRW T + W+RPL+SILCIL ED +++ L++ Sbjct: 119 AEIIAEVLEDTIRNFPWSKSMRWGTG-----SLRWVRPLQSILCILSKED-GAEVVPLNI 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN TYGHRF AP I V D Y L+ A V+LDP R AI +A A A G Sbjct: 173 DGIASGNTTYGHRFMAPDQITVTGFDDYAAKLKRAHVVLDPAEREAAIRQEATNQAFASG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LE+VEDK LL E+ GLVEW V MG+ D ++L LP E+++ ++K +QK F R + Sbjct: 233 LEVVEDKGLLAEVAGLVEWPVVLMGAIDDEFLALPPEVLQTSMKEHQKFFSVRNPKTGRI 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 FI V+N + +D GA I+ GN +V++ARL DA FW+ D + Sbjct: 293 EKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLRTVTE-------------- 338 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 + + +A+L +V FH K+GTQ R+ RI L ++IA ++ AD L ++A ++KA Sbjct: 339 --QGFEPWVAKLG--NVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAARVAKA 394 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G+ YA +A E H P GP ++VPT +S+ V+LA Sbjct: 395 DLSSEMVYEFPELQGLMGRYYAEAAGLPQDVANACEAHYSPLGPSDDVPTEPVSVAVALA 454 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFFHD 540 DKLDTL FWAI+EKP+GSKDP+ALRRA LG+IR++LEN + + + D Sbjct: 455 DKLDTLTGFWAIDEKPTGSKDPFALRRAALGVIRLVLENDLRLSIQPIYTQGIQSQQIVD 514 Query: 541 RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + L + + IE L N I + L + Sbjct: 515 QALELLLETRTKVQGIEETLADPNYQGSLISGTREALEK 553 Score = 190 bits (484), Expect = 6e-46, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 2/175 (1%) Query: 529 IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGE 587 +L+ FFHDRLK++L D+ IRHD+I+A + ND+L +V + L +F +S G Sbjct: 578 KAPADLLSFFHDRLKVFLRDQGIRHDVIDACIAMEGNDDLTLLVKRARALEDFMASDDGP 637 Query: 588 KFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 L KR ILA E+K+ E S ++ ++E L+ ++ I +++ + Sbjct: 638 NLLQGFKRANNILAQAEEKDGVEYSYGADKKFAEDDSEIALFDALASSEGAISSAIEAED 697 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ P++ FF+ V VN D+ VR NRL+LL I+ + V ++ +I Sbjct: 698 FAAAMGSMAALRAPVDAFFEAVQVNSDNEVVRRNRLNLLSQIRKVCGQVADLTRI 752 >gi|148990283|ref|ZP_01821494.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP6-BS73] gi|147924422|gb|EDK75512.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP6-BS73] Length = 678 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 192/712 (26%), Positives = 324/712 (45%), Gaps = 75/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFRGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V ++ + + Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQAVEAIVP 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 V ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GVVDVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGS 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + D Sbjct: 182 RVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V Sbjct: 241 ADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 301 RNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------IS 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADKL Sbjct: 398 TGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYE 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 518 NKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E + + EK L + + Q Sbjct: 576 VESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPASQ 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 624 QLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|302335666|ref|YP_003800873.1| glycyl-tRNA synthetase beta chain [Olsenella uli DSM 7084] gi|301319506|gb|ADK67993.1| glycyl-tRNA synthetase beta chain [Olsenella uli DSM 7084] Length = 698 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 196/732 (26%), Positives = 324/732 (44%), Gaps = 74/732 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFLLE+ EE+P+ A L+ + L + G+ + + + TP RL + + ++ Sbjct: 5 KDFLLEVGCEEMPSAPLASAQAQLARLSASALTDAGLAHGAIECHSTPRRLSVLVHDVAM 64 Query: 62 HSPEKIEERLGPRVGA-------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E E R GP G KA GF R GL ++ D D A Sbjct: 65 ATEEVHEVRRGPATGIAFDAEGRPTKAAQGFARKMGLGA-EQLVVRGDGDGKDYVFAETS 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P R + +L I + WP +S RW + H+ +++RP++ I +L Sbjct: 124 IPSRPAQPILSAAAKRLIASLEWPNYRSQRWGSEHA-----TFVRPVRWICALL-----G 173 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 +++I + ++ N T GHR + + Y L A V+L+ + RR AIL Sbjct: 174 DEVIPVSFADVTSSNATRGHRVLGAGEHAIANPSAYRETLRSAGVMLE-DERREAILAGV 232 Query: 233 HRLASAVGL-ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 R+ G + + +L+E++ L EW + +G FD+++L +P E+I ++ +NQ+ F Sbjct: 233 ARIEEERGGAHVDTPRRVLDEVVNLCEWPTLLVGRFDEEFLAVPHEIICESMLSNQRYFP 292 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L F++VSN + +V GN RVV ARL+DA F+ D Sbjct: 293 IYDASGALTREFVVVSNADPAVSP-TVVAGNERVVRARLDDAKFFYDED----------- 340 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADV 408 L PLD + RLD V F ++GT ++V R+ L ++A+ + Sbjct: 341 ---------LKVPLDDFVERLDR--VTFQERLGTMRQKVERMESLSAEVARGAGQGEEVA 389 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 L RA L+KADL ++ V EF QG +G YA E AI EH +PR + + Sbjct: 390 RLARRAAHLAKADLVSQAVVEFTNQQGVMGGYYAKAAGEPAEVASAIREHYRPRFAGDAL 449 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGII-----------RIIL 517 P + V++ADKLDT+ +AI+E P+GS DP+A RRA +GII R ++ Sbjct: 450 PEGVVGKAVAIADKLDTICGMFAIDEPPTGSSDPFAQRRAAIGIIAMARAMPTLSLRPLI 509 Query: 518 ENKID------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 +D + + + LFF RL D + D IEA+ + + Sbjct: 510 GAALDAYARQGLAFDAGDVAEKVALFFAGRLATIARDDGVSPDTIEAVSSVGVIDPDEFL 569 Query: 572 DLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 L+ + A + + R + + + + + +AE+ L Sbjct: 570 HRAHALDGARADAPEVFDDLATAYARAAHL------GDARLGTTVDEAL-MGQAERELLH 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 ++++S+ + + L + EPI+ FFD VLV +D +R+NRL LL Sbjct: 623 ACERGAGNVEKSLSMRDFDGACRALAELKEPIDHFFDDVLVMDEDTVLRENRLRLLNKFA 682 Query: 690 NIILIVINVQKI 701 ++ V ++ + Sbjct: 683 SVFSGVADIGAL 694 >gi|94676541|ref|YP_588622.1| glycyl-tRNA synthetase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123384150|sp|Q1LTU2|SYGB_BAUCH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94219691|gb|ABF13850.1| glycyl-tRNA synthetase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 699 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 191/723 (26%), Positives = 337/723 (46%), Gaps = 68/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FL+EI +EE+PA+ + A+ + I L G+ Y ++ + P RL + + ++ Sbjct: 6 FLVEIGTEELPAKELRRLAQYFTANFINELNANGINYNDINWFAAPRRLAIKVNSINSIP 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E+ GP + G A G+ R+ G+ + D KG+ + + Sbjct: 66 TKSYMEKRGPAINKAFDAEGKPTPAAIGWARNCGITVNQAERFTTD--KGEWLIYRMLVE 123 Query: 117 KRLIEDVLKTIVPVAIQKVP-WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ +L ++V A+ K K MRW + + +IRP+++I +L + + Sbjct: 124 TKPVQKLLCSMVYNALTKFSSLTKIMRWGEKN-----YKFIRPVRTITLLL-----DDLV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHR 234 I ++ I I GHRF I + D+Y L E V+ D E R++ I + Sbjct: 174 IPGNIFGIDSNRIILGHRFMGESVISLLHADYYPNVLLERGRVIADYELRKDTIRRNIEI 233 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + +G + LLEE+ LV+W V SF+ +L +P E + T++ NQK F Sbjct: 234 MVKKIGGFTKINDKLLEEVTSLVDWPIVLTASFNANFLRIPAEALIYTMENNQKYFPVYD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L FI V+NI++++ +V GN +V+ +RL D F Sbjct: 294 AKGKLLPYFIFVTNIESTNTNQIVV-GNEKVMRSRLADVEFF------------------ 334 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRA 414 FN+D + L+ + L + V F ++GT ++ R+ +L IA++I D+ RA Sbjct: 335 --FNIDRKQKLEDYL--LLLGQVKFQMELGTLLDKSYRLEILASWIAEIISTDIKQAARA 390 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 ++SK DL T++V E+PE+QG IG YA L E A +E P +N+PT +S Sbjct: 391 ALISKCDLMTQMVFEYPEIQGIIGMHYATLDGETELVALAQKEQYLPLFSGDNLPTTLVS 450 Query: 475 ITVSLADKLDTLINFWAINEKPSG-SKDPYALRRATLGIIRIILENKIDIPLSQFIED-- 531 VS+ADK+D L + IN++ + + DP ALRRA LGI+RII+E ++ I L I+ Sbjct: 451 CAVSIADKMDNLAGIFGINQQYTKQANDPLALRRAALGILRIIIEKQLPIDLLSLIDKAV 510 Query: 532 -------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRP--ENDNLLTIVDLIKH 576 + +I F +RL + + D I A++ L+ ++ Sbjct: 511 FLYNKKLTNTIVVEQIIHFMLNRLLSWYKKQGYSIDTINAVMAVYKPTGKLIHFDARLRA 570 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++ E KRIF I+A + I+ E++ L E L I+ Sbjct: 571 VHYLRQIPHAENLT---KRIFNIIAKHKDL---INGEVNFTLLKQPEEVILINSITQLHK 624 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + +Y + L ++ E I FF ++++ +++E+ NRL+++ ++ + LI+ Sbjct: 625 KLILFFEKGKYQEALWELINLREIINTFFSKIIIMTENKELCINRLNIINKVRQLFLIIA 684 Query: 697 NVQ 699 + Sbjct: 685 DFS 687 >gi|294787911|ref|ZP_06753155.1| glycyl-tRNA synthetase, beta subunit [Simonsiella muelleri ATCC 29453] gi|294484204|gb|EFG31887.1| glycyl-tRNA synthetase, beta subunit [Simonsiella muelleri ATCC 29453] Length = 680 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 204/670 (30%), Positives = 339/670 (50%), Gaps = 56/670 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEKIEERL 71 P + + + + L++ +I Y +P RL + ++ + ++ + Sbjct: 15 PPKALNNLGNHFAQSIAEGLEKAQLIDGETQFTAYASPRRLAVQVQNVKAEQADQHIVKK 74 Query: 72 GPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVA 131 GP V A +KAI+GF RS G++ S I + K DVY + + + D+L IV A Sbjct: 75 GPAVTANEKAIEGFARSCGVEKGSLKII--NDGKQDVYAHEFTQTGQKLADLLGDIVNAA 132 Query: 132 IQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYG 191 ++K+P PK MRW + S +++RP+ ++ + A+ ++ + + + + T G Sbjct: 133 VKKLPIPKVMRWGS-----STHTFVRPVHGLVVMHGAD-----VLPVSVLGLASRHFTLG 182 Query: 192 HRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 HRF + +K D Y + L E+ V+ R+NAI + A+++ + D+ LL Sbjct: 183 HRFLSQGEVKFIQADDYAKQLAEQGKVIASFAERKNAIQAALNEQANSLNATVAADESLL 242 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ LVE+ V +F++ +L +P+E + LT++ NQK F + G L N F+LVSN+Q Sbjct: 243 DEVTALVEYPVVLQAAFEEHFLAVPQECLILTMQQNQKYFPLLDKNGKLMNRFLLVSNLQ 302 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 +D + I+ GN RV+ ARL DA F+K+DQ L+ R+ Sbjct: 303 TNDP-SHIISGNERVLRARLSDAEFFYKQDQK--------------------ATLESRLP 341 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 +L VV+H KIG+Q ERV R++ + IA + AD A +RA L+KADL TE+V EF Sbjct: 342 KLQ--SVVYHNKIGSQAERVERLQTIAAHIAGYLKADKAAAERAARLAKADLVTEMVGEF 399 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +GK YA L E AIE+H +PR + +P N+I V+LADKL+TL+ W Sbjct: 400 PELQGTMGKYYAQLDGEQPEIALAIEQHYQPRFAGDALPENRIGTAVALADKLETLVGIW 459 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDI-------------PLSQFIEDQNLILF 537 I P+G KDPYALRR+ LG++R+++ + + I L + F Sbjct: 460 GIGLIPTGDKDPYALRRSALGVLRMLMNDSLSINELLTFVFDSFPKDLLSENTVSEVADF 519 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIF 597 RL + L + D D++ A+L D L + ++ + +F + + KR+ Sbjct: 520 MQARLAVLLQN-DYPQDVVAAVLAQRPDRLNDLQAKLQAVKQFKQLPESVALAAANKRVQ 578 Query: 598 QILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSI 657 +L KK+ + E++P L + EK L+A + +Q ++ + + L +I Sbjct: 579 NLL----KKSDDALGEVNPSLLAQDEEKALFAAVQALQPKVQTALSTQNFQAALSELATI 634 Query: 658 CEPIEIFFDQ 667 ++ FFD Sbjct: 635 KPQVDAFFDG 644 >gi|94991012|ref|YP_599112.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10270] gi|229558579|sp|Q1JFJ1|SYGB_STRPD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94544520|gb|ABF34568.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10270] Length = 679 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 341/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V++D + R+ I+ L G+++ Sbjct: 181 GCVSRGHRFLGTET-TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D++LL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DENLLNEVLNLVEFPTAFMGSFEAKYLDIPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAA------- 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 624 QQLEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|15901324|ref|NP_345928.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae TIGR4] gi|111658115|ref|ZP_01408814.1| hypothetical protein SpneT_02000723 [Streptococcus pneumoniae TIGR4] gi|221232199|ref|YP_002511352.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae ATCC 700669] gi|225854916|ref|YP_002736428.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae JJA] gi|25009336|sp|Q97PW6|SYGB_STRPN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781864|sp|B8ZL20|SYGB_STRPJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781866|sp|C1CF57|SYGB_STRZJ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|14972964|gb|AAK75568.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae TIGR4] gi|220674660|emb|CAR69229.1| glycyl-tRNA synthetase beta chain [Streptococcus pneumoniae ATCC 700669] gi|225723313|gb|ACO19166.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae JJA] Length = 678 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 194/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLADKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + G+ + Sbjct: 181 SRVSRGHRFLGQET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKASLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------ILSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|306826894|ref|ZP_07460194.1| glycyl-tRNA synthetase beta subunit [Streptococcus pyogenes ATCC 10782] gi|304430912|gb|EFM33921.1| glycyl-tRNA synthetase beta subunit [Streptococcus pyogenes ATCC 10782] Length = 679 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 339/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ E E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTELTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLNIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V++D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D++LL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DENLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVARAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAAPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 626 --LEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|126643134|ref|YP_001086118.1| glycyl-tRNA synthetase subunit beta [Acinetobacter baumannii ATCC 17978] Length = 595 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 182/630 (28%), Positives = 315/630 (50%), Gaps = 55/630 (8%) Query: 86 LRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWST 145 +R G+ + K + + + ++ +L I+ A+ +P K MR Sbjct: 1 MRGQGITVDQLSTFQ--AGKVEKVCYLKDVKGQSLDALLPQILQTALDNLPIAKRMR--- 55 Query: 146 THSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSL 205 S S ++RP+K ++ + +++I+ +++ GN+TYGHRFHAP + + Sbjct: 56 --SAASRTEFVRPVKWVVLLK-----DDQVIEATIQDHKAGNVTYGHRFHAPEAVTLAHA 108 Query: 206 DHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMG 265 + Y+ LE+A V+ + E R+ I +LA V + DLL+E+ LVEW Sbjct: 109 NDYLAALEKAYVVANFEKRQATIQEQVKKLADEVNATAIVPADLLDEVTSLVEWPVALRA 168 Query: 266 SFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRV 325 +F+++YL +P+E + T++ NQK F EG L FI VSNI++ D I++GN +V Sbjct: 169 TFEERYLAVPQEALITTMQDNQKYFCLINAEGKLQPYFITVSNIESKDSTQ-IIEGNEKV 227 Query: 326 VAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGT 385 V RL DA F+ +DQ +PL R +L ++VF A++GT Sbjct: 228 VRPRLSDAEFFFLQDQK--------------------QPLASRKEKL--ANMVFQAQLGT 265 Query: 386 QGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQ 445 ++ +RI L ++ + A+ A ++A +L+K DL +E+V EFPELQG G YA ++ Sbjct: 266 LWDKSTRIAKLAVALSSITGANPADAEKAALLAKCDLTSELVGEFPELQGIAGTYYARIE 325 Query: 446 NENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYAL 505 EN +A+ E P+ + +P K T++LAD+LDTL+ + I + P+GSKDP+AL Sbjct: 326 GENTEVSEALGEQYLPKFAGDVLPKTKTGTTIALADRLDTLVGIFGIGQAPTGSKDPFAL 385 Query: 506 RRATLGIIRIILENKIDIPLSQF----------------IEDQNLILFFHDRLKLYLHDR 549 RR+ +GI+R+I+EN++D+ + + + + F R + D+ Sbjct: 386 RRSAIGILRLIIENELDVTIEELVNLALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQ 445 Query: 550 DIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 + D+++A+ + L + +N F + + + KR+ ILA E Sbjct: 446 GVAVDVLQAVQALAPKSPLDFDKRVNAVNHFRTLPEAAALAAANKRVANILAKEAAPEGS 505 Query: 610 ISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVL 669 + L+ +AEK L+A + ++ + K Y L ++ PI+ FFD V+ Sbjct: 506 ----VIEANLVEDAEKALFAELQAVTPVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVM 561 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 V DD +++ NRL LL ++N+ V +V Sbjct: 562 VMADDADLKANRLRLLAQLRNLFTAVADVS 591 >gi|330881826|gb|EGH15975.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 560 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 180/592 (30%), Positives = 286/592 (48%), Gaps = 51/592 (8%) Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 +L TIV ++ +P K MRW ++RP + ++ + ++++D + Sbjct: 2 LLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF-----GDQVVDCTILA 51 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G + GHRFH P +++ S Y+ DL A VL D RR I LA+ Sbjct: 52 QSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKRVDELATQQEGT 111 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F EG L Sbjct: 112 AIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDAEGKLLPR 171 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 172 FITVANIESKDP-AQIVTGNEKVVRPRLTDAEFFFKQDKK-------------------- 210 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 + L+ RL +VVF A++G+ ++ R+ L IA I D RA +LSK DL Sbjct: 211 QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRAARAGLLSKCDL 268 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 +E+V EFPE+QG G YA E A+ E PRG +PT V++ADK Sbjct: 269 SSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTTLTGAAVAIADK 328 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 329 LDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKFAVTQFGAKIKP 388 Query: 532 ----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGE 587 + ++ F DRL+ D + + ++ + + L ++ + F + Sbjct: 389 AGLAEQVLDFIFDRLRARYEDEGVDVAVYLSVRALQPASALDFDQRVQAVQAFRKLPQAA 448 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRY 647 KR+ +L+ E I+ + P+Y E LY+ I +Q ++Y Sbjct: 449 ALAAVNKRVSNLLSKAE---GSIAQTVEPKYFDNANEFSLYSAIQQADHAVQPMAAERQY 505 Query: 648 HQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + L + EP++ FF+ V+VN +D VR NR +LL ++ + L V ++ Sbjct: 506 SESLARLAMLREPVDAFFEAVMVNAEDANVRANRYALLSRLRGLFLGVADIS 557 >gi|71904089|ref|YP_280892.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS6180] gi|123747755|sp|Q48RX3|SYGB_STRPM RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|71803184|gb|AAX72537.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS6180] Length = 679 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 341/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V++D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMG+F+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGNFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V +D+ +++NR+++L + + + ++ Sbjct: 626 --LEQVFALSPVINDFFDNTMVMAEDQALKNNRVAILSDLVSKAKTIAAFNQL 676 >gi|225869964|ref|YP_002745911.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. equi 4047] gi|254781862|sp|C0M9J7|SYGB_STRE4 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225699368|emb|CAW92792.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. equi 4047] Length = 679 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 193/712 (27%), Positives = 320/712 (44%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + Y + + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLVERMADFLKANRLSYDAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGQFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKQAKDVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 VP + + +P SM W+ +F +IRP+ S++ +L ++ ++LD +I G Sbjct: 132 AVPEVLASLTFPVSMHWANN-----SFDYIRPVHSLIVLL-----DDEPLELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF + S D Y DL V+ + R+ I+ + + +++ D Sbjct: 182 RISRGHRFLGEET-SITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNAK-HLQNVIKGNEKVLVARLEDGEFFWREDQKL--------------------SIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L V FH KIG+ E + R +V+ +A A+ + V RA + K DL Sbjct: 340 DLVAKL--AHVTFHEKIGSVAEHMERTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLTGEAAAVATAIREHYLPNSAEGELPETKVGAVLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWSIPMDKLIDSLYELSFDSLTYQ 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + I D+ EA+L + + ++ + L + Sbjct: 518 HKAEVLDFICARVDKMMGSA-IPKDIREAVLASSSFVVPELLARAEALAAASQLDTYKPA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R+F + + I + E+ L + + + Sbjct: 577 VESLSRVFNLAKKAVDA-----VLIDASLFENDYERALAQAVDSL-------VLSGSAKE 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ I+ FFD +V +D +R NRL+LL + + + ++ Sbjct: 625 QLAQVFALSPVIDDFFDHTMVMTEDEAIRRNRLALLAELVKKVETIAAFDRL 676 >gi|220904189|ref|YP_002479501.1| glycyl-tRNA synthetase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868488|gb|ACL48823.1| glycyl-tRNA synthetase, beta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 694 Score = 644 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 199/728 (27%), Positives = 327/728 (44%), Gaps = 63/728 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI SEE+P+R +L L E G+ Y ++R TP R + ++ L+ Sbjct: 1 MATFVLEIGSEELPSRFLAPEEAELFTRFTTALDEAGLEYGSLRVMSTPRRAVVMVENLN 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E+ E GP V G KA++GF+R+ G +++ +KG Sbjct: 61 PVQIEREEVISGPPVRVAYDAEGKPTKALEGFVRTNGCALEDV--FQQETEKGAYVAVRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R ++L + P I +P+ K MRW + ++ RPL+ IL +L + Sbjct: 119 RTGGAPASELLAVMCPAIISALPFAKRMRWGNH-----SLAYARPLRWILALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEA-MVLLDPECRRNAILNDA 232 +II ++ + G T GHR H P V L ++ + LD RR I+ Sbjct: 169 EIISFEVGPMVSGRETCGHRIHGAGPFSVARAAELPAILADSCGITLDSPKRREIIVEGG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +R A VG +++ LL+E+ GL E + FD YL +P E++ +++++QK F Sbjct: 229 NRQAQTVGGKVLWKDSLLDEVQGLAEHPVPLLADFDPAYLEVPREVLLTSMESHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V NI D + + +G RV+ ARLEDA FW+ D Sbjct: 289 EGADGRLLPHFLTVLNITPEDM-SIVKRGWERVLRARLEDARFFWQAD------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-VALV 411 L + D + +LD V+F +G+ G++ R+ L + +A+ D A Sbjct: 336 --------LREGFDHWLQKLD--SVIFIGGLGSMGDKTRRLESLCRWLAEKCAPDLAADA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL + +V EF LQG +G YA + E+ + A+ E P GP +P + Sbjct: 386 ARAGRLSKADLVSGLVGEFDTLQGVMGGIYAARKGESAAVAQAVAEQYLPAGPDSPLPGS 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +SLADK DTL + + P+G+ DP LRR LGIIRI+L+ + + + + Sbjct: 446 MCGALLSLADKADTLAGCFGLGMIPTGAADPNGLRRCALGIIRIVLDFGLRLDMREVFAR 505 Query: 532 QNLIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + FF RL+ Y + L++A L + + Sbjct: 506 AQELYGDRQWKLPPAEALDKLMEFFGARLRNYFMSQGQDTLLVDAALGAGAAQVKDCGER 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L +F A + + KR+ IL + + +I + + L +AEK L A + Sbjct: 566 LEALVDFSREAGFAEAAQTFKRVANILRKQGQAE-DIPAQWQAELLHEDAEKALAATLDG 624 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + L ++ ++ FFD V+V DD +R NRL++LQ + Sbjct: 625 LLPELDRMWAAREHTAALACLSNVRPAVDAFFDGVMVMCDDAALRRNRLAMLQALGGRFA 684 Query: 694 IVINVQKI 701 + + + Sbjct: 685 RLADFAAL 692 >gi|218197396|gb|EEC79823.1| hypothetical protein OsI_21278 [Oryza sativa Indica Group] Length = 1068 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 182/721 (25%), Positives = 335/721 (46%), Gaps = 68/721 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P +A + L LI +L++ + + +R Y TP RL + ++ L+ Sbjct: 386 FVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRLSHGKVRSYGTPRRLAVVVENLNMKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP V G KA +GF R + D ++ K + A +++ Sbjct: 446 MEEEIELRGPPVAKAFDQEGRPTKAAEGFCRKNNVPI--DSLYRRTDGKTEYIYARVKES 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++VL +P I + +PKSMRW+ S + RP++ I + + I+ Sbjct: 504 ARFADEVLTEDLPTIISGISFPKSMRWN------SNIVFSRPIRWIFAL-----HGDLIV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN + G R + KV++ + Y+ LE+A +L+D + R+ IL+D+ LA Sbjct: 553 PFCFAGISSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQERKQRILHDSSILA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR- 295 VG +++ L++E+I LVE +G +D +L LP++++ ++ +QK F ++ Sbjct: 613 EGVGGDIIAPDSLVQEVINLVEAPMPIIGRYDVSFLALPKDVLITVMQKHQKYFPVTSKT 672 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L CFI V+N + + +GN V+ AR EDA F+K D Sbjct: 673 MGNLLPCFITVANGAIKE--EVVRKGNEAVLRARYEDAKFFYKMDTQ------------- 717 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVD 412 K L + +L ++FH ++GT +++ R+ ++A L+ + + Sbjct: 718 -------KKLSEFRDQLS--SILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIK 768 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T IV EF L G + + YA+ + +A+ E PR + P Sbjct: 769 DAAALAMSDLATNIVTEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTD 828 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I +++ D+LD+L+ + +PS + DP+ LRR + G+++I++ENK + L++ + Sbjct: 829 PGIVLAVTDRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLV 888 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ F RL+ L D I +++ ++L + + Sbjct: 889 AEEQPITIDSGVIDEVVQFVTRRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEME 948 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + K + + R +I+ K +LE+ + E+ L++ + I Sbjct: 949 AFSRTEDFPKIVEAYSRPTRIIR---GKEIGSALEVDASVFEKDEERALWSAYLEVADKI 1005 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +D K + L +P+E FF V V +D +VR+NRL+LL + ++ + ++ Sbjct: 1006 HPGVDIKAFADASLELL---QPLEDFFTNVFVMAEDEKVRNNRLALLTKVASLPKGIADL 1062 Query: 699 Q 699 Sbjct: 1063 S 1063 >gi|94989012|ref|YP_597113.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS9429] gi|229558578|sp|Q1JKK0|SYGB_STRPC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94542520|gb|ABF32569.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS9429] Length = 679 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 196/713 (27%), Positives = 341/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V++D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMG+F+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGNFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ + ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGVVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V +D+ +++NR+++L + + + ++ Sbjct: 626 --LEQVFALSPVINDFFDNTMVMAEDQALKNNRVAILSDLVSKAKTIAAFNQL 676 >gi|224372774|ref|YP_002607146.1| glycyl-tRNA synthetase subunit beta [Nautilia profundicola AmH] gi|223588758|gb|ACM92494.1| glycyl-tRNA synthetase, beta subunit [Nautilia profundicola AmH] Length = 657 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 196/712 (27%), Positives = 337/712 (47%), Gaps = 73/712 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K ++ + +L++ + Y+TP RL L+ + Sbjct: 5 LLIEIGVEELPAIPLLKELPNIEKKWLDVLEKYDLK-ATFSFYYTPRRLTLWHREFPVKQ 63 Query: 64 PEKIEERLGPR---VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +K EE G + KA++GF + G+ + + K K Y + Sbjct: 64 EDKTEEIWGAPKEIIEKNPKALEGFAKKCGIS-VDEVTFKAKGNKEFAYF-QKEVKGKEA 121 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++L ++ + + + K+M+W + +IRP++ ILC+L ++++I+ D Sbjct: 122 KELLPQMINEWLNSLSFGKTMKWGECEA-----EFIRPVRWILCML-----EDEVIEFDA 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + NIT HR I++ + Y L++ V+L + R+ IL + +L G Sbjct: 172 YCVKSSNITKPHRIF-KDDIEIGYVGDYFCRLDKHGVILYQDERKAKILREIEKLEKENG 230 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +++ D+DLL EI+ + E+ +G FD+++L LP E+I ++K +Q+ F ++G L Sbjct: 231 IKVEIDEDLLAEIVAITEYPTPLLGKFDEEFLVLPPEVIITSMKEHQRYFPVY-KDGKLT 289 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F++VSN D I+ GN +V+ ARL DAL FW+ D N ++ LK Sbjct: 290 NAFVVVSNAYT-DNFDKIIAGNEKVLRARLSDALFFWENDLKNGLSIEGLK--------- 339 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 D+V+ +G+ ++V R + + +A AD + +A+ L+KA Sbjct: 340 ---------------DIVYMDGLGSVYDKVKREEKIAEILADKFSADKDKLLKAVNLAKA 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL TE+V EF ELQG +G YA AI+E + +NK S +++A Sbjct: 385 DLLTEMVYEFTELQGVMGYYYAKAAGIEDEIAVAIKEQYT------DEASNKTSALLNIA 438 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF----------IE 530 LDTL+ ++I + P G+KDP+ LRRA II+I EN ID+ + + Sbjct: 439 RNLDTLMALFSIGKIPKGNKDPFGLRRAANYIIKIANENDIDLDIKDIINELKDNYKDFD 498 Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFL 590 +L+ F +RL + ++ +I ++L NL I +K +NE +S ++ Sbjct: 499 TNSLVDFIFERLYKFY---NVNPSVIRSVLATGESNLREIDKKVKLINEMVNSEGFKELS 555 Query: 591 LSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQI 650 + KR+ I+ K S+ + E EK L+ + K + Sbjct: 556 STFKRVANIV----KDFDLNSINVDESLFEKEEEKALWDEFKKVK-------EIKNLEEK 604 Query: 651 GDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 D L S+ I+ FFD V+VNVDD +VR NR SL+ I L + ++++I Sbjct: 605 LDFLVSLKPLIDKFFDNVMVNVDDEKVRHNRKSLIASIYKEFLDIADIKEIT 656 >gi|56807942|ref|ZP_00365761.1| COG0751: Glycyl-tRNA synthetase, beta subunit [Streptococcus pyogenes M49 591] Length = 679 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 337/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAEQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGVEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVARAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAAPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLSAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 626 --LEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|209559814|ref|YP_002286286.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes NZ131] gi|238064855|sp|B5XMM9|SYGB_STRPZ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|209541015|gb|ACI61591.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes NZ131] Length = 679 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 198/713 (27%), Positives = 337/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGVEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVARAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EA+L + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAAPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLSAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 626 --LEQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|290967923|ref|ZP_06559473.1| glycyl-tRNA synthetase, beta subunit [Megasphaera genomosp. type_1 str. 28L] gi|290782062|gb|EFD94640.1| glycyl-tRNA synthetase, beta subunit [Megasphaera genomosp. type_1 str. 28L] Length = 684 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 190/728 (26%), Positives = 317/728 (43%), Gaps = 73/728 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D LLEI +EE+PA L L+E + + +R TP RL L + Sbjct: 1 MSKDILLEIGTEEVPAHAMPGILRQLREAAATALQEAHIPFDAVRTVGTPRRLALLVTAA 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + GP G KA GF R GL + +++ A Sbjct: 61 AEMQDAVTTVHKGPSARIAYAADGTPTKAALGFARGLGLDVTA-LRVQD-----GYVFAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +L +++P IQ + +P SMRW F +IRP++ ++ + Sbjct: 115 VTHTGEATKTLLPSLLPALIQHLSFPNSMRWGR-----ETFRFIRPIRWLVALF-----G 164 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E++I L + G + GHRF + S Y + +++DP+ R I ++ Sbjct: 165 EEVIPFTLAGVTTGRRSRGHRFLGDGDFDIPSAQAYEATARDHFLMVDPKERETYIQHEL 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R +A G + D LLEE++ LVE+ V GSFD+ YL LPE +I +K +Q+ F Sbjct: 225 CRELAAAGAKQTVDPVLLEEVVYLVEYPTVLCGSFDEAYLQLPEAVIITPMKDHQRYFPM 284 Query: 293 RTR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 + G L N F+ V N A + GN RV+ ARL+DA F+ D+ Sbjct: 285 YSAATGRLMNRFLTVRNGDAR-YLDTVRHGNERVLRARLDDAKFFFTEDRKQSLWAHV-- 341 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVA 409 + +VF +GT ++ R++ L + + + A Sbjct: 342 --------------------ESLRHIVFQNGLGTLYDKALRLQKLTVYLNHSLQLGLEDA 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 ++RA +L+KADL T++V EF ELQG +GKEYA L E+ + A++E PR +++P Sbjct: 382 QLERACLLAKADLSTQMVMEFTELQGVMGKEYAKLDGESEAVAAALQEQYLPRYAGDDLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + +S+ADK+DTL+ + + + P+GS+DPYALRR T+G++ I+L+ + D ++ + Sbjct: 442 QTVMGSVLSVADKIDTLVGMFRLGKLPTGSQDPYALRRQTIGVLHILLQRQWDADMATLL 501 Query: 530 EDQNLI----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + F RLK DR LIE + N + Sbjct: 502 DAAAAGYEAADEAAGDVRKQLEAFIALRLKNIFQDRGHEASLIEGAMAGHPLNAMQGQRR 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ L K E L + R+ ++ + ++ AE+ L+AV Sbjct: 562 VEALETARRL-KQEDLLQAYTRVGNMVR------EDTPTHVTEALFTAAAERDLWAVCRQ 614 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + +L + + I F D V V ++ +R+NRL LL + +I Sbjct: 615 MEAALPAVYAAYDFEAALRILRTGMDAIRTFLDTVRVLDENIAIRENRLHLLARVYALIR 674 Query: 694 IVINVQKI 701 +++K+ Sbjct: 675 PFGDIRKV 682 >gi|288904608|ref|YP_003429829.1| glycyl-tRNA synthetase (beta subunit) [Streptococcus gallolyticus UCN34] gi|288731333|emb|CBI12884.1| glycyl-tRNA synthetase (beta subunit) [Streptococcus gallolyticus UCN34] Length = 679 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 196/712 (27%), Positives = 334/712 (46%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLV 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P +M W+ F +IRP+ ++ +L E +I G Sbjct: 132 DIPEILSAMTFPVNMHWANN-----TFEYIRPVHTLTVLLDDEALDLD-----FLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF ++ S D Y DL + V+ D + R++ I+N + A +++ D Sbjct: 182 RVSRGHRFLGHET-EIASADSYEEDLRKVFVIADAKERQDMIVNQIKDIEKAQNVQVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 DELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KIA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 340 DLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTYE 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R++ + + + D+ EA+L N + +++ L E +A + Sbjct: 518 HKAEVMDFIRARVEKMMS-KSVSKDIKEAVLAGSNFVVAEMLEAADALVEASKAADYKAA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R+F + + + EK L ++ ++ S K Sbjct: 577 VESLSRVFNLAEKA-----PADVTVDASLFENNEEKALAQAAAEL--NLSGSASDK---- 625 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 -LAQLFALSPVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|322412455|gb|EFY03363.1| glycyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 679 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 206/713 (28%), Positives = 348/713 (48%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAARVIGLANQQTDLTEDFKGP 74 Query: 74 R-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDAAGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + ++ +P SM W+ +F +IRP+ + +L ++ +DL+ +I Sbjct: 132 G-VAEVLAEMTFPVSMHWAKN-----SFEYIRPVHTFTVLL-----DDEALDLEFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I++ + +A G+++ Sbjct: 181 GRVSRGHRFLGKET-TITSADSYEDDLRSQFVIADAKERQEMIVDQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L FI Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIDNVIKGNEKVLVARLEDGEFFWREDQKL--------------------QV 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L + A VDRA + K DL Sbjct: 339 ADLVAKL--ANVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L EN + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGENPAVATAIREHYLPDAAEGVLPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL------ 536 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ + Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWRIPMDKLVDSLYDLSFDSLNY 516 Query: 537 --------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 F R+ + + I D+ EA+L + I+ + L +++ E Sbjct: 517 ANKVDVMNFIRARVDKMM-GKAIPKDIREAVLESSTFVVPEILAAAEVL---VNASHTEN 572 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + + EK + S+ + P + E+ L+A I ++ S +++ Sbjct: 573 YKPAVESLSRAFNLAEKAD--ASVRVDPSLFENDHEQALFAAIQSLS--LEGSAENQ--- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V DD+ +++NRL+LL + + ++ Sbjct: 626 --VEQVFALSPVINDFFDNTMVMADDQAIKNNRLALLAVLVGKAKSIAAFNQL 676 >gi|306830602|ref|ZP_07463768.1| glycyl-tRNA synthetase beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304427249|gb|EFM30355.1| glycyl-tRNA synthetase beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 679 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 196/712 (27%), Positives = 334/712 (46%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLV 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P +M W+ F +IRP+ ++ +L E +I G Sbjct: 132 DIPEILSAMTFPVNMHWANN-----TFEYIRPVHTLTVLLDDEALDLD-----FLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF ++ S D Y DL V+ D + R++ I+N + A +++ D Sbjct: 182 RVSRGHRFLGHET-EIASADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKAQNVQVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 DELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KIA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 340 DLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTYE 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R++ + + + D+ EA+L N + +++ L E +A + Sbjct: 518 HKAEVMDFIRARVEKMMS-KSVSKDIKEAVLAGSNFVVAEMLEAADALVEASKAADYKAA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R+F + + + + EK L ++ ++ S K Sbjct: 577 VESLSRVFNLAEKA-----PADVTVDASLFENDEEKALAQAAAEL--NLSGSASDK---- 625 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 -LAQLFALSPVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|86609951|ref|YP_478713.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558493|gb|ABD03450.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. JA-2-3B'a(2-13)] Length = 730 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 193/754 (25%), Positives = 323/754 (42%), Gaps = 87/754 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLE+ EE+PA A E + L E + + M+ + TP RL + L+GL Sbjct: 1 MVAYLLEVGCEELPASFVDSALEQWRTGIPASLAEAHLQAEQMQLFGTPRRLAVLLQGLP 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P++ E GP V G A + F + G+ S +I++ KG AV R Sbjct: 61 TQQPDRTLEVKGPPVQVAYQDGQLTPAGEKFAQKQGVDPGS-LEIRQ-VGKGSFVFAVQR 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R VL+ + P I + + MRW+ + RP++ ++ + ++ Sbjct: 119 VRGRPTAAVLQELAPAWITNLSGERLMRWACGD-----LKFPRPIRWLVSLW-----DDQ 168 Query: 175 IIDL--------DLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++ L + + G ++ GHR + ++ + Y++ ++EA V DP R Sbjct: 169 VLPLLLPTHEGNTMPGLVAGRVSRGHRVLGSQQVTLERAESYVQQMQEAGVSPDPAVREA 228 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I + +LA V E LL E++ LVEW +G F+ ++L LP +I + + Sbjct: 229 YIQAEVTKLARQVNGEAQIPAPLLREVVQLVEWPTAVLGRFEPEFLRLPPAVIETVMIIH 288 Query: 287 QKCFVTRT--REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 Q+ F R L FI +SN I GNSRVV ARL DA F++ D+ Sbjct: 289 QRYFPVRDGRDPQKLLPYFITISNGDPG-QSERIGAGNSRVVRARLSDARFFYEEDRRI- 346 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 PL QR+ RL V F +G+ ++V RIR + + IA + Sbjct: 347 -------------------PLAQRVERLQA--VTFAEGLGSMRDKVERIRHISRLIAAAL 385 Query: 405 DADV---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + D ALV+R L KADL T++V EFPELQG +G +YA E + + IE+H P Sbjct: 386 NLDAQEQALVERTAYLCKADLVTQMVYEFPELQGIMGADYARQDGEPEAVAEGIEQHYWP 445 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 G + +PT V AD+LDTL+ + + P+GS D +ALRRA ++ + + Sbjct: 446 LGAGDALPTALTGRVVGWADRLDTLVGMFRLGRIPTGSSDRFALRRAANSLVLVAWDAGW 505 Query: 522 DIPLSQFIED-------------QNLILFFHDRLKLYLHDRD-IRHDLIEAILR------ 561 + ++ + L F R++ L + I +DL+ A++ Sbjct: 506 TFDFNLLLQSVVQDYAFGDVHTLRALQEFLAQRIQTLLQEEKRIDYDLVRAVVGDPESVK 565 Query: 562 -----------PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK--KNR 608 NL + ++L ++ + + R ++ A + Sbjct: 566 TEDPQKAELTMRALGNLPLTLLRAEYLQHLRATGELADLYPTLNRCARLAAQGDLDYAVV 625 Query: 609 EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQV 668 + + + P L AE+ LY E + + + L + + FF+ V Sbjct: 626 DPAAAVDPDQLQEAAERELYEACQKVYRLGVEPALQGDFVPLVEALQAAAPQVAQFFEAV 685 Query: 669 LVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 LV D R +RL+LL ++N ++ ++ +V Sbjct: 686 LVMDPDPGRRASRLNLLGVLRNQSRLLGDMGAVV 719 >gi|225859236|ref|YP_002740746.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae 70585] gi|254781863|sp|C1C870|SYGB_STRP7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225720159|gb|ACO16013.1| glycyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae 70585] Length = 678 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 195/713 (27%), Positives = 328/713 (46%), Gaps = 77/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + + ++ ++ + TP RL + + GLS + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLKGKRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL I+ KG+ Y+ V ++ + +E ++ Sbjct: 75 AKKIALDSDGNFTKAAQGFVRGKGLTVED---IEFREIKGEEYVYVTKEEIGQAVEAIVP 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 IV ++ + +P SM W+ +F +IRP+ ++ +L E+ DLD +I Sbjct: 132 GIV-DVLKSLTFPVSMHWAGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKG 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 ++ GHRF K+QS Y DL + V+ DP R I++ + + + + Sbjct: 181 SRVSRGHRFLGKET-KIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHDVRIEI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI Sbjct: 240 DADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + + Sbjct: 300 VRNGNA-ERLKNVIKGNEKVLVARLEDGEFFWREDQKLV--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADL 422 + +L+ +V FH KIG+ E + R + +A+ D V + RA + K DL Sbjct: 339 SDLVEKLN--NVTFHEKIGSLREHMIRTGQITVLLAEKADLSVDETVDLARAAAIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++Y +L E + AI EH P +P +K+ +++ADK Sbjct: 397 LTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDT+++F+++ PSGS DPYALRRAT G++RI+ I + + I+ Sbjct: 457 LDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + D+ EA+L N + +++ L E + Sbjct: 517 ENKAEVMDFIKARVDKMMGS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKP 574 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + E + + EK L + + Sbjct: 575 SVESLSRAFNLAEKAEGV-----ATVDSALFENDQEKALAEAVETL-------VLSGPAS 622 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Q L ++ I+ FF+ +V +D+ VR NRL++L + +I Sbjct: 623 QQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 675 >gi|57168130|ref|ZP_00367269.1| glycyl-tRNA synthetase, beta subunit [Campylobacter coli RM2228] gi|57020504|gb|EAL57173.1| glycyl-tRNA synthetase, beta subunit [Campylobacter coli RM2228] Length = 664 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 190/718 (26%), Positives = 343/718 (47%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L++ ++ + + Y+TP RL ++ + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKDVLEDYRLV-SDFKFYYTPRRLVIFHENFA 59 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G K A FL+ G+ ++ K+ K +V Sbjct: 60 SKQEDSFAEFIGAPKNVAYKDGQLSAAGQSFLQKAGIS-ENELSFKEIKGK-EVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 ++VL ++ ++ + + KSMRW T +F +IR ++SI+CIL + Sbjct: 118 IKGLQSQEVLGEMIHQFLKSLNFGKSMRWGTN-----SFEFIRAIRSIVCIL-----DDN 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + + T+ HR + + + Y LE+ ++LDP R+ IL Sbjct: 168 LVEFESYGVKSAKKTFIHRSVSYDLQEFNNAKEYFSLLEKNYIILDPLQRKERILKQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L S +++ ED++LL E+I + E+ +GSF+++YL +P E+I +++ NQ+ F Sbjct: 228 LESQNNIQIGEDEELLAEVIAITEYPNALLGSFEEEYLQIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D + N Sbjct: 288 EKG-LSNHFIVVSNAVCEDY-SKIIHGNERVLRARLSDAMFFYQNDLQSGLNPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q+++ D A + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEVLCQMLNNDKIANIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 AI +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 AIKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L + + +E Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQALLEKLA 501 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 Q L F +RL + + I+A+L ++ +L+ I +K L E Sbjct: 502 SHYKNFDMQILKDFIFERLYTFYS---VNASFIKAVLSSKSTDLIHINQSVKALIELSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 A ++ + KR+ I S ++ + EAE +LY +E + Sbjct: 559 ANFQENFTTFKRLANIANK-------TSHKVDENLFVEEAENKLYKAF-------KEKIQ 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L S+ I+ FFD+V++N D ++++NR +L+ I L + +++++ Sbjct: 605 AHSLQEKLENLFSLKPFIDEFFDKVMINAKDEKLKNNRQALIYEIYEEFLKIADLKEL 662 >gi|171056906|ref|YP_001789255.1| glycyl-tRNA synthetase subunit beta [Leptothrix cholodnii SP-6] gi|238689122|sp|B1Y7P2|SYGB_LEPCP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170774351|gb|ACB32490.1| glycyl-tRNA synthetase, beta subunit [Leptothrix cholodnii SP-6] Length = 713 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 203/741 (27%), Positives = 340/741 (45%), Gaps = 72/741 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGL 59 P+ L+E++ EE+P + K E + L LK G+ + + + +P RL +++ G+ Sbjct: 4 PNLLVELFVEELPPKALKKLGESFAGTLAASLKAGGLAGADAVVTPFASPRRLAVHVTGV 63 Query: 60 SPHSPEKIEERL-GP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYLA 111 + + +K P G A+ L + G +K+ P K + Sbjct: 64 AAKAADKSVLHKLMPVAVALDAAGNATPALLKKLAALGADASVVPSLKRQPDGKAEALFL 123 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + L+ + A+ K+P PK M + ++ +++RP ++ + Sbjct: 124 DSQVAGATLAEGLQKALDDALAKLPIPKVMGYQLADG-WTSVNFVRPAHGLVAL-----H 177 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 + ++ + + G T+GHRF A ++++ D Y LE E V+ E RR I+ Sbjct: 178 GDDVVPVATLGLVAGRSTHGHRFEAAVPTVELRHADSYAEQLETEGAVIAGFEARRAEIV 237 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A+A GL+ ++D LL+E+ LVE V + F+ ++L +P+E + LT+K NQK Sbjct: 238 RQLDAAAAAQGLKPIDDDALLDEVTALVERPNVLVCQFEPEFLAVPQECLILTMKANQKY 297 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L + F++VSNI+ D +A++ GN RVV RL DA F+ +D+ Sbjct: 298 FPLLDAAGKLTHKFLIVSNIRPDDA-SAVIGGNERVVRPRLADAKFFFDQDRK------- 349 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---- 405 K L+ R+ L VV+H K+GTQGER R+R +G I + Sbjct: 350 -------------KTLESRVPGL--ARVVYHGKLGTQGERAERVRAIGHAIVNQLRMATI 394 Query: 406 ---ADVAL--------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDA 454 D V +A +L+K DL T++V EFPELQG +G YA + A Sbjct: 395 PYTVDAQDEFAVLDSKVQQAALLAKTDLLTDMVGEFPELQGIMGGYYARHEGLRDGVAIA 454 Query: 455 IEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR 514 IE+H KPR + +P N ++LADKL+TL+ + I + P+G +DP+ALRR LG+IR Sbjct: 455 IEDHYKPRFAGDALPRNHTGTVLALADKLETLVGLFGIGQLPTGDRDPFALRRHALGVIR 514 Query: 515 IILENKIDIPLSQFIEDQNLI-------------LFFHDRLKLYLHDRDIRHDLIEAILR 561 I++E + + L + F DRL + L D+ ++A+L Sbjct: 515 ILVEKNLPLDLPALLNGAVPAFGELIEDPRLALFDFMRDRLAVNLRDQGYSAQEVDAVLA 574 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 E L + + + F + + + KRI IL +K + I L Sbjct: 575 LEPARLGDVPKRLAAVRAFAALPEAAALAAANKRIGNIL---KKAEGTVEARIDAALLAE 631 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 AE++L A ++ Y L ++ P++ FFD V+VN +D +R NR Sbjct: 632 PAEQQLAAALAQVQPGADALFAQGEYAASLQALAALKAPVDAFFDDVMVNAEDPALRANR 691 Query: 682 LSLLQYIKNIILIVINVQKIV 702 L LL + + V + ++ Sbjct: 692 LGLLATLHGAMNRVAELARLA 712 >gi|222153556|ref|YP_002562733.1| glycyl-tRNA synthetase subunit beta [Streptococcus uberis 0140J] gi|254781865|sp|B9DV92|SYGB_STRU0 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|222114369|emb|CAR43106.1| glycyl-tRNA synthetase beta chain [Streptococcus uberis 0140J] Length = 679 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 202/711 (28%), Positives = 352/711 (49%), Gaps = 76/711 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + K+ L + LKE + +++++ + TP RL + + GL+ + IE+ GP Sbjct: 15 PAYVVTKSEMQLGEKVASFLKENRLSFESIQTFSTPRRLAVRVIGLAEKQEDLIEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 KA GF+R GL T + I+ KG+ Y+ V + + E+VLK Sbjct: 75 SKKIALDENGEFSKAAQGFVRGKGLTTDA---IEFRTIKGEEYVYVTKHENGKDAEEVLK 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 I P + + +P SM W+ F +IRP+ ++ +L +I Sbjct: 132 DI-PSVLSSLTFPVSMHWANH-----TFEYIRPVHTLTVLLDDNALDLD-----FLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G + GHRF + +++ + Y DL+ V++DP+ R+ IL+ + A + + Sbjct: 181 GQKSRGHRFLGKE-VTIENANSYESDLKTVFVIVDPKERQQMILDQIKAIEIAENVAVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMG+FD+KYL +PEE++ ++K +Q+ FV R + G L FI Sbjct: 240 DEDLLNEVLNLVEYPTAFMGTFDQKYLDVPEEVLVTSMKNHQRYFVVRDKNGHLLPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N + + +++GN +V+ ARLED FWK DQ + Sbjct: 300 VRNGNS-EYIENVIKGNEKVLVARLEDGEFFWKEDQKLN--------------------I 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R +V+ +A+ + + +DRA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARTKVIASHLAEKVGLSDQERQALDRASQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ AI EH P +P +K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGESAMVATAIREHYLPNSAEGALPESKVGALLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LDTL++F++++ PSGS DPYALRRAT GI+RI+ +IP+ +E+ Sbjct: 457 LDTLLSFFSVDLIPSGSNDPYALRRATQGIVRILEAFGWNIPMDALVENCYQLPFESLTY 516 Query: 532 ---QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 ++ F R+ + + I D+ +A+L N + +++ + L S+++ + Sbjct: 517 TNKDQVMSFISARVDKMM-GKAIPKDIRDAVLASTNYQVPQMLETAQAL---VSASQSQG 572 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + ++ + EK +E +I+ + E LY I + Sbjct: 573 YKTAVENLSRVFNLAEKAEQEP--QINSDLFENDEEIALYKAIENLNLE-------GNAK 623 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 + + L ++ + I FFD +V V+D V++NRL+LL + + + Sbjct: 624 EKVEQLFALNDVIVNFFDHTMVMVEDVNVKNNRLALLSSLVSKAQTLAQFN 674 >gi|325977583|ref|YP_004287299.1| glycyl-tRNA synthetase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177511|emb|CBZ47555.1| glycyl-tRNA synthetase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 679 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 196/712 (27%), Positives = 333/712 (46%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLV 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P +M W+ F +IRP+ ++ +L E +I G Sbjct: 132 DIPEILSAMTFPVNMHWANN-----TFEYIRPVHTLTVLLDDEALDLD-----FLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF ++ S D Y DL V+ D + R++ I+N + A +++ D Sbjct: 182 RVSRGHRFLGHET-EIVSADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKAQNVQVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 DELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KIA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 340 DLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTYE 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R++ + + + D+ EA+L N + +++ L E +A + Sbjct: 518 HKAEVMDFIRARVEKMMS-KSVSKDIKEAVLAGSNFVVAEMLEAADALVEASKAADYKAA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R+F + + + EK L ++ ++ S K Sbjct: 577 VESLSRVFNLAEKA-----PADVTVDASLFENNEEKALAQAAAEL--NLSGSASDK---- 625 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 -LAQLFALSPVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|305431720|ref|ZP_07400888.1| glycyl-tRNA synthetase beta subunit [Campylobacter coli JV20] gi|304445202|gb|EFM37847.1| glycyl-tRNA synthetase beta subunit [Campylobacter coli JV20] Length = 664 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 190/718 (26%), Positives = 342/718 (47%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L++ ++ + + Y+TP RL ++ K + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKDVLEDYRLV-SDFKFYYTPRRLVIFHKNFA 59 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G K A FL+ G+ ++ K+ K +V Sbjct: 60 SKQEDSFAEFIGAPKNVAYKDGQLSAAGQSFLQKAGIS-ENELSFKEIKGK-EVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 ++VL ++ ++ + + KSMRW +F +IR ++SI+CIL + Sbjct: 118 IKGLQSQEVLGEMIHQFLKSLNFGKSMRWGAN-----SFEFIRAIRSIVCIL-----DDN 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + + T+ HR + + + Y LE+ ++LDP R+ IL Sbjct: 168 LVEFESYGVKSAKKTFIHRSVSYDLQEFNNAKEYFSLLEKNYIILDPLQRKERILKQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 L S +++ ED++LL E+I + E+ +GSF+++YL +P E+I +++ NQ+ F Sbjct: 228 LESQNNIQIGEDEELLAEVIAITEYPNALLGSFEEEYLQIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D + N Sbjct: 288 EKG-LSNHFIVVSNAVCEDY-SKIIHGNERVLRARLSDAMFFYQNDLQSGLNPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q+++ D A + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEVLCQMLNNDKIANIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 AI +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 AIKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L + + +E Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQALLEKLA 501 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 Q L F +RL + + I+A+L ++ +L+ I +K L E Sbjct: 502 SHYKNFDMQILKDFIFERLYTFYS---VNASFIKAVLSSKSTDLIHINQSVKALIELSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 A ++ + KR+ I S ++ + EAE +LY +E + Sbjct: 559 ANFQENFTTFKRLANIANK-------TSHKVDENLFVEEAENKLYKAF-------KEKIQ 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L S+ I+ FFD+V++N D ++++NR +L+ I L + +++++ Sbjct: 605 AHSLQEKLENLFSLKPFIDEFFDKVMINAKDEKLKNNRQALIYEIYEEFLKIADLKEL 662 >gi|115465888|ref|NP_001056543.1| Os06g0103600 [Oryza sativa Japonica Group] gi|55296761|dbj|BAD67953.1| putative aminoacyl-t-RNA synthetase [Oryza sativa Japonica Group] gi|113594583|dbj|BAF18457.1| Os06g0103600 [Oryza sativa Japonica Group] gi|222634809|gb|EEE64941.1| hypothetical protein OsJ_19814 [Oryza sativa Japonica Group] Length = 1068 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 182/721 (25%), Positives = 334/721 (46%), Gaps = 68/721 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P +A + L LI +L++ + + +R Y TP RL + ++ L+ Sbjct: 386 FVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRLSHGKVRSYGTPRRLAVVVENLNMKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP V G KA +GF R + D ++ K + A +++ Sbjct: 446 MEEEIELRGPPVAKAFDQEGRPTKAAEGFCRKNNVLI--DSLYRRTDGKTEYIYARVKES 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++VL +P I + +PKSMRW+ S + RP++ I + + I+ Sbjct: 504 ARFADEVLTEDLPTIISGISFPKSMRWN------SNIVFSRPIRWIFAL-----HGDLIV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN + G R + KV++ + Y+ LE+A +L+D + R+ IL+D+ LA Sbjct: 553 PFCFAGISSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQERKQRILHDSSILA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR- 295 VG +++ L++E+I LVE +G +D +L LP++++ ++ +QK F ++ Sbjct: 613 EGVGGDIIAPDSLVQEVINLVEAPMPIIGRYDVSFLALPKDVLITVMQKHQKYFPVTSKT 672 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L CFI V+N + + +GN V+ AR EDA F+K D Sbjct: 673 MGNLLPCFITVANGAIKE--EVVRKGNEAVLRARYEDAKFFYKMDTQ------------- 717 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVD 412 K L + +L ++FH ++GT +++ R+ ++A L+ + + Sbjct: 718 -------KKLSEFRDQLS--SILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIK 768 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 A L+ +DL T IV EF L G + + YA+ + +A+ E PR + P Sbjct: 769 DAAALAMSDLATNIVTEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTD 828 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-- 530 I +++ D+LD+L+ + +PS + DP+ LRR + G+++I++ENK + L++ + Sbjct: 829 PGIVLAVTDRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLV 888 Query: 531 ------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 ++ F RL+ L D I +++ ++L + + Sbjct: 889 AEEQPITIDSGVIDEVVQFVTRRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEME 948 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 F + K + + R +I+ K +LE+ + E+ L++ + I Sbjct: 949 AFSRTEDFPKIVEAYSRPARIIR---GKEIGSALEVDASVFEKDEERALWSAYLEVADKI 1005 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 +D K + L +P+E FF V V +D VR+NRL+LL + ++ + ++ Sbjct: 1006 HPGVDIKAFADASLELL---QPLEDFFTNVFVMAEDERVRNNRLALLTKVASLPKGIADL 1062 Query: 699 Q 699 Sbjct: 1063 S 1063 >gi|306832846|ref|ZP_07465980.1| glycyl-tRNA synthetase beta subunit [Streptococcus bovis ATCC 700338] gi|304424985|gb|EFM28117.1| glycyl-tRNA synthetase beta subunit [Streptococcus bovis ATCC 700338] Length = 679 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 195/712 (27%), Positives = 334/712 (46%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVSGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLI 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P +M W+ F +IRP+ ++ +L E +I G Sbjct: 132 DIPEILSAMTFPVNMHWANN-----TFEYIRPVHTLTVLLDDEALDLD-----FLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF ++ S D Y DL V+ D + R++ I+N + +++ D Sbjct: 182 RVSRGHRFLGHET-EIASADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKVQNVQVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 DELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGNA-EYLENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KIA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 340 DLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTYE 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R++ + + + D+ EA+L N + +++ L E +A + Sbjct: 518 HKAEVMDFIRARVEKMMS-KSVSKDIKEAVLAGSNFVVAEMIEAADALVEASKAADYKAA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R+F + + + + EK L ++ ++ S + K Sbjct: 577 VESLSRVFNLAEK-----TPADVTVDASLFENDEEKALAQAAAEL--NLSGSANDK---- 625 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 -LAQLFALSPVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|290953410|ref|ZP_06558031.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica URFT1] gi|295313371|ref|ZP_06803980.1| glycyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica URFT1] Length = 620 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 188/650 (28%), Positives = 326/650 (50%), Gaps = 59/650 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL E+ +EE+P + A+ L + + LKE V + + + + +P RL +KGL+ Sbjct: 6 KDFLFELGTEELPPKALRNLAQSLLVSVESQLKEAEVSFGDTKWFASPRRLSFIIKGLAE 65 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + + E+ GP V G + GF +S G++ ++ KGD + Sbjct: 66 SQQDVVIEKQGPLVSIAYKEGEPTQVGLGFAKSCGVELDELERVAT--PKGDKLFYKTVQ 123 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L+ I+ A++++P K MRW + S+ ++RP+ +L + + Sbjct: 124 SGQATVNLLQEIITKALKQLPISKMMRWGS-----SSVEFVRPVHWVLALY-----GNDV 173 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ NITYGHRFH P I + ++ YI+ L +AMV++D + R+ ++ A + Sbjct: 174 VDIEILGHKAANITYGHRFHHPQAIVIDNISDYIKLLADAMVIVDWQQRKQMLVEQAENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A ++V D DL+EE+ +VE+ + SF+K +L +P+E + ++ +QKCF Sbjct: 234 AKENDYQVVLDDDLVEEVCAIVEYPNAMLCSFNKDFLRVPQEALISAMEEHQKCFALLDN 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI +SNIQ+ + GN +V+ ARL DA F+ D Sbjct: 294 QGDLVANFITISNIQSKKP-ELVTSGNQKVMNARLADAAFFYDTD--------------- 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L L+Q + +L+ V F +K+G ++ RI + +++A+L + D RA Sbjct: 338 -----LKTSLEQLLPKLE--HVTFQSKLGNMYQKAQRIANIAQQLAELGNFDSQQAHRAG 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +L+KADL + +V EF +LQG IGK YA E + +AIE+ P+ +P ++ Sbjct: 391 LLAKADLISNMVFEFTDLQGIIGKYYAKAHGETDTVAEAIEQQYWPKYSGAELPRTNVAA 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE----- 530 V+LA+KLDTL+ +AI +KP+G+KDP+ALRR+ +GI+RI+ + +DI L + I+ Sbjct: 451 CVALAEKLDTLVGIFAIGQKPTGNKDPFALRRSAIGILRILRDTSVDISLEKIIDITLES 510 Query: 531 -------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 +I F DRLK + I D+ EAI D++ ++ + Sbjct: 511 YKKINNLEFNTDVKTEVISFCLDRLKNLYKEEGIAVDIFEAINNTNYDSIKDFAARVEAV 570 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 +F++S K + + S KR+ I++ + E E L Sbjct: 571 TKFYNSDKAQSLIASNKRVANIISKNATDKDYYYNIELAKAAANEYELAL 620 >gi|294783854|ref|ZP_06749176.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 1_1_41FAA] gi|294479666|gb|EFG27445.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium sp. 1_1_41FAA] Length = 687 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 193/727 (26%), Positives = 343/727 (47%), Gaps = 72/727 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EEIPAR +A DL LK + Y+ ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEEIPARFLSQALTDLKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVADMQ 62 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP + G KA +GFL + + +K D KG+ Sbjct: 63 EDLDELNIGPSKDRAYKDGELSKAGEGFLNAYKIDESQIEIVKND--KGEYIAFKRFAKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I+ + + +PKSM+WS + RP++ L + +++ Sbjct: 121 EATEKLLPEILKELVLEETFPKSMKWSDK-----TLRFARPIEWFLALY-----GNNVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I N + GHRF +V S++ Y + E V++D RR I ++ Sbjct: 171 FEIEGIKSSNKSKGHRFFGKE-FEVISVEDYFNKIRENNVIIDISERRKMIEEMINKALL 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F ++G Sbjct: 230 EDE-KADIDEGLLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILDKKG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI++ N D + +GN +V++ARL DA F++ D Sbjct: 289 KLLPKFIVIRNGI--DFSQNVKEGNEKVLSARLADARFFYQED----------------- 329 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAI 415 L PLDQ + +L VVF +GT +V R + + + + + A + R + Sbjct: 330 ---LKIPLDQNVEKLKT--VVFQKDLGTMFSKVKRTEKIAEFLIGKLKYNYMKADILRTV 384 Query: 416 VLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ E F +LQG +G +YA+ + E I I+EH PR + +P+ Sbjct: 385 KLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEIGVAIGIKEHYYPRFQGDLLPSGIE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI------------IRIILENKI 521 I L+D+ DTL+ + + P+GSKDP+ALRR LGI ++ +++ + Sbjct: 445 GIITGLSDRTDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANINISLKELVKVSL 504 Query: 522 D-------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 D + + + + +++ F R+ D D R D++ A+L + DN+ ++++ Sbjct: 505 DALEADKVLKVDRAKVEADVLEFLKQRMINVFTDMDYRKDIVLAVLDRDADNITNALEIV 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++E + K E L AKR+ I+ ++ + + E EK LYA Sbjct: 565 KVISEKLALNKLEDLLQVAKRVTNIITK-----GNNNVTVKEKLFKEEIEKTLYAETKKV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 G ++S+ Y + + S+ I+ +F+ V+V +D+ VR+NR++ L YIKN+ Sbjct: 620 GEEAEKSVKENEYADYFEKMVSLAPTIDKYFETVIVMDEDKNVRENRINQLTYIKNLFDR 679 Query: 695 VINVQKI 701 + + KI Sbjct: 680 IAYLNKI 686 >gi|157804240|ref|YP_001492789.1| glycyl-tRNA synthetase subunit beta [Rickettsia canadensis str. McKiel] gi|229558574|sp|A8F071|SYGB_RICCK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157785503|gb|ABV74004.1| glycyl-tRNA synthetase subunit beta [Rickettsia canadensis str. McKiel] Length = 667 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 212/702 (30%), Positives = 349/702 (49%), Gaps = 60/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A + + + +E + + ++ + P R+ L+ L + K G Sbjct: 13 IPAFMQKNAEKGYLNVFTKIFEENKI-FAKVKVFVGPRRITLHATHLPKVTLPKDTAIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y + + +R I+++L I+ AI Sbjct: 72 PSLNASEAAINGFCKAHNVSKLE--LFTKLINNQLYYFFIKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W + W+RPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWTKSMFWGDYN-----IKWVRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R I+V++ + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKIEVENFEDYKNKLSENHVILERTKREEIIKAGLLELANSHDLTIKEDNRLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G K+L LP+E++ +++ +QK F + G A F+ VSN + Sbjct: 240 VSGLTEFPVVLLGRIPLKFLELPKEVLISSMRRHQKYFCLFDKAGNFAPYFLFVSNGRFV 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + +++GN +V+AARL DAL+F+K+D +K L+ +++L Sbjct: 300 NA-ELVIKGNEKVLAARLADALYFYKQDI--------------------AKTLESNLSKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 L V FH K+G E+V RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 --LAVTFHVKLGNLREKVDRITNICNYIAP----NNKDLIMAAKLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + AI++H KP+G +NVP + ++ ADK+D+L+ Sbjct: 393 LQGIMGYYYAKHDGLDEEVATAIKDHYKPQGLSDNVPNGN-AALLATADKIDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRII+ENK+++ L+ I + F Sbjct: 452 GEAPTGSGDPYALRRQALGIIRIIIENKLELNLNDLINFSINLYKDSSDKNKDLIISFLK 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R+K Y + + LI A+L ++L+++ + L +F + G++ L + KR I Sbjct: 512 ERIKFYFKN-NYDISLINAVLDLSAEDLVSVSLKLNTLQKFLAEDAGKQLLNAYKRASNI 570 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + ++EK L+AV+ I +S+ K Y ++ +LL S+ Sbjct: 571 I-----GDQKITGLVDGNLFTTQSEKELFAVMQKILPQIIDSITDKDYERVLNLLSSLLA 625 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FF VLVN D ++ NRLSLLQ + + ++ Sbjct: 626 PITSFFGNVLVNDPDPKIVQNRLSLLQNTCELFHKIAKFNRL 667 >gi|237739148|ref|ZP_04569629.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 2_1_31] gi|229423748|gb|EEO38795.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 2_1_31] Length = 687 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 191/727 (26%), Positives = 343/727 (47%), Gaps = 72/727 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EEIPAR +A DL LK + Y+ ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEEIPARFLSQALTDLKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVAEMQ 62 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP + G KA +GFL + + +K D KG+ Sbjct: 63 EDLNELNIGPSKERAYKDGELSKAGEGFLNAYKIDESQIEIVKND--KGEYIAFKRFAKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I+ + + +PKSM+WS + RP++ L + +++ Sbjct: 121 EATEKLLPEILKELVLEETFPKSMKWSDK-----TIRFARPIEWFLALY-----GNNVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I N + GHRF +V S++ Y++ + E V++D RR I ++ Sbjct: 171 FEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLKKIRENNVIIDISERRKMIEEMINKALL 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F ++G Sbjct: 230 EDE-KADIDEGLLDEVTNLVEHPYAIVGNFSEDFLEVPQEVLIISMKVHQRYFPILDKKG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI++ N D + +GN +V++ARL DA F++ D Sbjct: 289 KLLPKFIVIRNGI--DFSQNVKEGNEKVLSARLADARFFYQED----------------- 329 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAI 415 L PLDQ + +L VVF +GT +V R + + + + + A + R + Sbjct: 330 ---LKIPLDQNVEKLKT--VVFQKDLGTMFNKVKRTEKIAEFLIGKLKYNYMKADILRTV 384 Query: 416 VLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ E F +LQG +G +YA+ + E I I+EH PR + +P+ Sbjct: 385 KLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEIGVAIGIKEHYYPRFQGDLLPSGIE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI------------IRIILENKI 521 I L+D++DTL+ + + P+GSKDP+ALRR LGI ++ ++ + Sbjct: 445 GIITGLSDRIDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANINISLKELVNVSL 504 Query: 522 D-------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 D + + + +++ F R+ D R D++ A+L + DN+ ++++ Sbjct: 505 DALQADQVLKADRAKVEADVLDFLKQRMINVFTDMKYRKDIVLAVLDRDADNITNALEIV 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++E + K E L AKR+ I+ ++ + + E EK LYA Sbjct: 565 KVISEKLALNKLEALLQVAKRVTNIITK-----GNNNVTVKEKLFKEEIEKTLYAEAKRI 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 G ++S+ Y + + S+ I+ +F+ V+V +D+ +R+NR++ L YIKN+ Sbjct: 620 GEEAEKSIKENEYADYFEKMISLVPTIDKYFEAVIVMDEDKNIRENRINQLTYIKNLFDR 679 Query: 695 VINVQKI 701 + + KI Sbjct: 680 IAYLNKI 686 >gi|325917986|ref|ZP_08180153.1| glycyl-tRNA synthetase beta chain [Xanthomonas vesicatoria ATCC 35937] gi|325535809|gb|EGD07638.1| glycyl-tRNA synthetase beta chain [Xanthomonas vesicatoria ATCC 35937] Length = 743 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 200/779 (25%), Positives = 335/779 (43%), Gaps = 116/779 (14%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ G+ + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFDGVLAGLEKRGIAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P +L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGAQTAALLPDILREAIAAMPIPKPMRWGAHD-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 +I +L + IT GHRF + + + +YI L A VL+D E RR I Sbjct: 172 ---GNDVIPAELLGVRGDRITRGHRFMHEGEVSLAAPGNYIDALRSAHVLVDAEARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSARISDDNLEQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI++ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGKLTEQFIGIANIESKD-VAEVAKGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEAIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLDLKGL 505 Query: 529 IEDQNLI----------------------------------------------LFFHDRL 542 I+ + F DRL Sbjct: 506 IQHAYNLAKQSASEVVLRQKKDAADKIRAIGVDAPTSHASQRSLHHEELTELFDFILDRL 565 Query: 543 KLYLHDRDIRHDLIEAI--------------------LRPENDNLLTIVDLIKHLNEFFS 582 + Y D+ + A+ L + +L I + F + Sbjct: 566 RGYYADKGVPATHFNAVAALFSVAPEGTTAPHGVGAHLGAIHGSLYDFDRRIDAIGIFAT 625 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 + E + KRI IL K + EI +I L AE+ L + +++ Sbjct: 626 LPEAEALAAANKRIRNILR---KVDGEIPGDIDTALLREPAEEALAEAVEAAIGDTGDAL 682 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V ++ + Sbjct: 683 HRHDYVAVLARLARLRPQVDAFFDGVMVNADDLQLRANRLALLKKLGDRLGSVAAIEHL 741 >gi|257095241|ref|YP_003168882.1| glycyl-tRNA synthetase subunit beta [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047765|gb|ACV36953.1| glycyl-tRNA synthetase, beta subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 690 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 217/728 (29%), Positives = 355/728 (48%), Gaps = 65/728 (8%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLK 57 M D L+E+ +EE+P + +E + + L + + Y TP RL + + Sbjct: 1 MNDTVLIELRTEELPPKSLKLLSEAFADTVFSALAAQQFTADDSVCTPYATPRRLAMTIT 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 ++ P++I ER GP V G +A++GF+R+ G+ D K K + ++ Sbjct: 61 HVAARQPDRILERKGPAVASGVDGEGRPTRALEGFMRAAGVTF--DQLHKTSDGKAEYFV 118 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 A K + L IV A++K+P PK MRW S ++RP+ ++ + Sbjct: 119 ARQAKAGEPLAAHLAEIVAQALKKLPIPKVMRWGD-----SEHQFVRPVHGLILL----- 168 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 I+ ++ + G T GHRF A I V + Y L V+ RR AI Sbjct: 169 HGTSIVPGEVLGLASGRSTLGHRFLASGDIVVDNPAAYAPSLLAGKVIASFADRRAAIAE 228 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 A +G + LL+E+ LVEW V++G F+ +YL +P+E + LT++ NQK F Sbjct: 229 QLAAAAGKLGARINPADGLLDEVTALVEWPAVYVGGFEAEYLDVPQECLILTMQQNQKYF 288 Query: 291 VTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 G L N F++VSN+Q D A+I+QGN RVV RL DA F+ +D+ N Sbjct: 289 PLLDAAGKLLNKFLIVSNMQVDDP-ASIIQGNERVVRPRLADARFFYDQDRKNG------ 341 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL 410 R+ RL VV+H K+G+ G+R R+ + + IA+ + AD L Sbjct: 342 --------------FATRVVRLG--SVVYHNKLGSLGDRAQRLGRVARSIAEKLHADANL 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 +RA + SK DL T++V EFPELQG +G+ Y + + DAIE+H +PR + +P Sbjct: 386 AERAALFSKIDLLTDMVGEFPELQGIMGRYYLLHEGGLPVVADAIEQHYRPRFAGDALPA 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I+ +LADKLD L+ F+ I + P+G KDP+ LRRA LG++RI++E + + L++ I+ Sbjct: 446 GNIACAAALADKLDALVGFFGIGQPPTGDKDPFGLRRAALGVLRILMETPLPLDLAELID 505 Query: 531 DQNL----------------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + + F DRL+ L D D++EA+L + + + Sbjct: 506 EAKSTLIQQGVQLEAVDEPLLTFMLDRLRGMLRDAGHSVDVVEAVLAQRPTRIDLVPARL 565 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 ++ F + + + KRI IL E E E L +AEK L+ + Sbjct: 566 AAVSGFQALPEALALAAANKRIGNILRKTE----EAFPEPDIALLEEDAEKDLFQRVLLI 621 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++ + ++ Y ++ S+ ++ FFD+V+VNV + +R NRL LL+ + + + Sbjct: 622 APLVRSHVANEDYADALKVVASVRPEVDRFFDEVMVNVHEPLLRRNRLGLLKTLFDQLNA 681 Query: 695 VINVQKIV 702 V ++ K+ Sbjct: 682 VADIAKLA 689 >gi|300173190|ref|YP_003772356.1| glycyl-tRNA synthetase subunit beta [Leuconostoc gasicomitatum LMG 18811] gi|299887569|emb|CBL91537.1| glycyl-tRNA synthetase, beta subunit [Leuconostoc gasicomitatum LMG 18811] Length = 687 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 198/731 (27%), Positives = 331/731 (45%), Gaps = 76/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L E + +++ Y TP RL + L +S Sbjct: 2 MSTFLLEIGLEEMPAHLVTSSEAQLIARTTEFLSEHRLSVGHIQPYSTPRRLAVELIDIS 61 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP + G KA GF R G+ + + + G V+L Sbjct: 62 SESEALSEEKRGPSIERAKDDNGNWSKAAQGFARGQGMTPEN-----FEERDGYVWLTK- 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P D+L +I I ++ + M+W+ AF ++RP++ I+ +L E Sbjct: 116 HTPGVSAADILASIGEEVIAQMKFTTYMKWANN-----AFLYVRPIRWIVALL-----DE 165 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K+ID ++ ++ G +T GHRF + I + + Y+ L+ A V++D R+ I + Sbjct: 166 KVIDFNILDVKTGRMTRGHRFLSNEHITIANAGVYVATLKAAYVIVDAATRKGIIQSQLE 225 Query: 234 RLASAVGLELVEDKD----LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+ L D LLEE+ +VEW F G F+ KYL LP+E++ +++ +Q+ Sbjct: 226 DIANQNNWLLDLSSDAAQNLLEEVNNIVEWPTAFSGGFENKYLELPDEVLMTSMREHQRF 285 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F + L F+ V N + + ++ GN +V+ ARLEDA F++ D+ Sbjct: 286 FYVTNQANDLLPHFLSVRNGNS-EHLDNVIAGNEKVLVARLEDAEFFYQEDKQ------- 337 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD-- 407 K +D M ++ L VFH KIGT E + R+ L +A + D Sbjct: 338 -------------KTIDDNMTKVKKL--VFHEKIGTVYEHMQRVGRLAASLADELQFDET 382 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A + RA + K DL T +V EF ELQG +G+ YA L E+ + AI EH P Sbjct: 383 QKADLARASEIYKFDLMTGMVGEFDELQGIMGEHYAQLFGESAAVASAIREHYMPVSANG 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 N+ + +++ADKLDT++ F++ + PSGS DPY LRRA G++R + + L Sbjct: 443 NIAETAVGAVLAIADKLDTIVTFFSADLIPSGSNDPYGLRRAANGVVRTLQNKHWHVALR 502 Query: 527 QF--------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIV 571 + ++ F DR++ D D+R D++ A D +++ IV Sbjct: 503 SLLSDFVKSNGEVTENADLTAIMTFILDRVRKLALDGDVRPDIVAAGTALTPDVDVVYIV 562 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 D + L + + R+ ++ + + + + E+ L+ Sbjct: 563 DRTQTLANHADDDNFRDIIEALTRVSRLAMKQPAEGL-----VDESLFENQTEQALFIAT 617 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 ES + L + +PI +FD +VN D+ V++NR L I + Sbjct: 618 QKINLAALESQGG---DAVYSALAELQKPIADYFDMTMVNADNELVKNNRYLQLHMIDKL 674 Query: 692 ILIVINVQKIV 702 I + ++++IV Sbjct: 675 ISALGDLEQIV 685 >gi|170017337|ref|YP_001728256.1| glycyl-tRNA synthetase, beta subunit [Leuconostoc citreum KM20] gi|238688968|sp|B1MZ60|SYGB_LEUCK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|169804194|gb|ACA82812.1| Glycyl-tRNA synthetase, beta subunit [Leuconostoc citreum KM20] Length = 686 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 213/730 (29%), Positives = 341/730 (46%), Gaps = 74/730 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI EE+PA + + L L + +++ + TP RL L L ++ Sbjct: 1 MSTFLLEIGLEEVPAHLVTSSESQLVARTKEFLAAHRLTVGDIKPFSTPRRLALQLCDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S EE+ GP V G KA GF R G + + + G V+L Sbjct: 61 EESEALSEEKRGPSVERAKDENGEWSKAAQGFARGQGATPEA-----FEERDGYVWLTK- 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 +L I + ++ + M+W+ +F ++RP++ ++ +L E Sbjct: 115 HTTGVPANQILSQIGEEVVSQMKFTTYMKWANH-----SFLYVRPIRWLVALL-----DE 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I+ ++ +I G +T GHRF + + + Y L+ A VL D E R+ I + Sbjct: 165 QVINFNVLDIATGRVTRGHRFLSTEHVTISDAQAYEETLQSAYVLADAENRKAQIKSQLE 224 Query: 234 RLASAVGLELVED----KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 +A+ L D +DLLEE+ +VEW F GSFD+KYL +P+E++ +++ +Q+ Sbjct: 225 TIANRNHWVLSLDNAPAQDLLEEVNNIVEWPTAFSGSFDQKYLEVPDEVLITSMREHQRF 284 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F R G L F+ V N + ++ GN +V+ ARLEDA F++ DQ Sbjct: 285 FYVRDTTGKLLPHFLSVRNGDTA-HLDNVIAGNEKVLVARLEDAEFFYREDQQ------- 336 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 K + MA++ L VFH KIGT E + R+ +L +K+A +D D Sbjct: 337 -------------KKIADYMAKVKTL--VFHEKIGTVYEHMQRVGLLAEKLADALDFDDD 381 Query: 410 ---LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + RA + K DL T +V EF ELQG +G+ YA L EN AI EH P Sbjct: 382 KKTDLARAAEIYKFDLMTGMVGEFDELQGVMGEHYARLFGENERVATAIREHYMPTSANG 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 N+ + + +++ADKLD ++ F+A N PSGS DPY LRRA G++R + I L Sbjct: 442 NIAKSDVGAVLAIADKLDAIVTFFAANLIPSGSNDPYGLRRAATGVVRTLTTKHWHIALQ 501 Query: 527 QFIED--------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + + ++ F DR++ D DIR D++ A +N IV Sbjct: 502 PVLAEFMAATGTVTASADLMAVLSFVVDRVRKLALDDDIRQDIVSA--GTDNFATADIVY 559 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 L + + A F + ++ + EK +SL ++PQ E EK LYA S Sbjct: 560 LTDRIQVLANHAHDNNFREVISALTRVARLAEK--TPVSLNVNPQLFENETEKALYAATS 617 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + E+ + + L ++ PI +FD +VNVD+ ++++NR + L I +I Sbjct: 618 ELQLVALEANGAE---ALYQALAALQMPISAYFDATMVNVDNEQIKNNRYAQLNIINQLI 674 Query: 693 LIVINVQKIV 702 + N++ IV Sbjct: 675 AGLGNLEDIV 684 >gi|257466465|ref|ZP_05630776.1| glycyl-tRNA synthetase beta chain [Fusobacterium gonidiaformans ATCC 25563] gi|315917622|ref|ZP_07913862.1| glycyl-tRNA synthetase subunit beta [Fusobacterium gonidiaformans ATCC 25563] gi|313691497|gb|EFS28332.1| glycyl-tRNA synthetase subunit beta [Fusobacterium gonidiaformans ATCC 25563] Length = 687 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 177/725 (24%), Positives = 333/725 (45%), Gaps = 74/725 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE PAR A +L + K E + + ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEENPARFLEPALAELKKNFMNKCKAERIAHGEVKMYGTPRRLILCAEEVAEQQ 62 Query: 64 PEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP +A GF +S G+ + I+ D KG+ A Sbjct: 63 EDLNELNIGPTKSIAFLNGEITRAGIGFAKSQGIDPVDLEIIQTD--KGEYIAARKSLQG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +L ++ + ++ +PKSM+WS + RP++ L + A ++++ Sbjct: 121 QATKTLLPELLKSLVLELSFPKSMKWSDLK-----IRFARPIEWFLAM-----ADSEVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ + N + GHRF V S++ Y + E V++D + R+ I D + Sbjct: 171 FEIEGMKSSNHSKGHRFFGKE-FTVNSVEDYFVKIRENNVIIDIQERKKMIREDILSKIA 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 ++V ++ LL E+ LVE+ +G+F+ +L +P+E++ ++++ +Q+ F + G Sbjct: 230 EDE-QVVIEEGLLSEVTNLVEYPYPIVGTFNSDFLEVPQEVLIISMEVHQRYFPILDKNG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L F+++ N + + GN +V++ARL DA F+K D N Sbjct: 289 KLLPKFVVIRNGI--EDSDNVRIGNEKVLSARLADARFFYKEDLRNH------------- 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVDRAI 415 L+ + +L VVF +GT +++ R + + + + + + V R Sbjct: 334 -------LENNVEKLK--HVVFQKDLGTIYQKIKRTQEICEILLAKLHLEEKRETVLRTA 384 Query: 416 VLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ E F +LQG +G +YA+ E I EH PR + +P Sbjct: 385 YLAKADLVSNMIGEKEFTKLQGFMGADYALKFGEKEEVSKGIREHYYPRFQGDELPQVVE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 I V +AD+LDTL+ + + PSGSKDP+ALRRA LGI+ IIL +K+D+ L + + Sbjct: 445 GILVGIADRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNIILNSKLDLSLRELVNASL 504 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ ++ FF RL ++ + D++ A+L ++++ + + Sbjct: 505 DTLAKDGVLKRDRAEVEKEVMEFFKQRLINVFSEK-MDRDIVAAVLEVQSEDAMDAFTRM 563 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F + + L AKR+ I + + E++ E EK LY Sbjct: 564 QALKAFLTQEGAKDLLDLAKRVGNISKEAKSR------EVNVTLFQQEEEKELYHYTEKT 617 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I+ + K Y + + E + +F+ V V ++ E+++NR+S L + ++ Sbjct: 618 KMEIESLVSDKNYAGYLAAVLASKEIVTKYFNAVKVMDENVEIQNNRISQLGLLSSLYQK 677 Query: 695 VINVQ 699 + ++ Sbjct: 678 LADLS 682 >gi|114328763|ref|YP_745920.1| glycyl-tRNA synthetase subunit beta [Granulibacter bethesdensis CGDNIH1] gi|114316937|gb|ABI62997.1| glycyl-tRNA synthetase beta chain [Granulibacter bethesdensis CGDNIH1] Length = 684 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 240/710 (33%), Positives = 372/710 (52%), Gaps = 61/710 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ KA EDL + L + + +++R + P RL L + P + G Sbjct: 13 IPARMQVKAGEDLVRLAGEALAD--LSPRDLRWHVGPRRLALTAT-VEAGVPARSGNERG 69 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PR+GA ++A+ GFLR G + + +GD ++ P R ++ ++P + Sbjct: 70 PRIGAPEQALAGFLRKYGADRSALRE------EGDYWVLDTSSPGREAAALIAEVIPALL 123 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK-------EIPC 185 K PWPKSMRW S F+W+RPL+ ILC L ++ L + Sbjct: 124 WKFPWPKSMRWG----GSSLFTWVRPLRRILCQLDGA-----VVPFSLAQGDDDGHGLRS 174 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G+ T GHRF +P +KV+ + + L V+LD E RR + R+A+A GL +V+ Sbjct: 175 GDETEGHRFLSPGAVKVRGIAEWQAALAGRHVVLDIEERRRRVAEGIARVAAAHGLTVVD 234 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D L++E+ GLVEW +G D +Y+ LP E+++++++ NQ+ F R EG A F Sbjct: 235 DPGLVDEVAGLVEWPVPLLGRIDDQYMSLPAEVMQVSMRVNQRYFALRDAEGKAAPYFAF 294 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 ++NI+A+D G AI+ GN RV+ AR DA HFW +D+ +PL Sbjct: 295 IANIEATDQGRAIMAGNERVLRARFADARHFWDQDRK--------------------EPL 334 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 R+A L+ V +HAK+G+Q V+R+R L ++IA L+ AD D A +L+KADL T Sbjct: 335 ASRLAVLER--VTYHAKLGSQAALVARLRRLAREIAPLVGADARDADGAALLAKADLTTG 392 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EFPELQG +G+ YA+ E+ DAI +H P+GP + VP +SI V+LADK+D Sbjct: 393 MVGEFPELQGVMGRYYALHDGESPWIADAIRDHYAPKGPSDPVPDAPVSIAVALADKIDR 452 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------QNLILFF 538 L F++I E P+GS DP+ALRRA LGIIRII EN + +PL + +L+ F Sbjct: 453 LAMFFSIGEAPTGSGDPFALRRAALGIIRIIRENGLRLPLGRLFAFASDEAPVADLLAFM 512 Query: 539 HDRLKLYLHDRDIRHDLIEAILRPEND-------NLLTIVDLIKHLNEFFSSAKGEKFLL 591 +RL++ L RHD++ A+ D +++ ++ + S G L Sbjct: 513 AERLRVQLRAEGARHDVLAAVFAVHADDTAEGAGDIVRLLARADAVAALLVSEDGANLLA 572 Query: 592 SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIG 651 + KR IL IE++K+ L + E+ L + + + ++D + Sbjct: 573 AYKRAANILRIEDRKDGPHQGTPDESLLEVPEERALAEALQEAEPAVMAALDAEDDATAM 632 Query: 652 DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + P++ FFDQV VN ++ +R NRL LL +++ + V + +I Sbjct: 633 ASLARLRGPLDAFFDQVTVNAEEPALRRNRLRLLSRLRDTMNRVADFSRI 682 >gi|171778117|ref|ZP_02919374.1| hypothetical protein STRINF_00209 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283099|gb|EDT48523.1| hypothetical protein STRINF_00209 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 679 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 194/712 (27%), Positives = 340/712 (47%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLKEKRLAFEGIQTFSTPRRLAVRVLGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T I+ KG+ Y+ V + + Sbjct: 75 SKKIALDAEGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHEAGKAAKEVLV 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P +M W+ F +IRP+ ++ +L E +I G Sbjct: 132 DIPEILSVMTFPVNMHWANN-----TFEYIRPVHTLTVLLDDEALDLD-----FLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF ++ + D Y DL + V+ D + R++ I+N + A + + D Sbjct: 182 RVSRGHRFLGHET-EITTADSYEEDLRKVFVIADAKERQDMIVNQIKAIEKAQNVRVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +G L FI V Sbjct: 241 DELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDLDGNLMPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N + +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGN-ENHIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KIA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 +A+LD +V FH KIG+ E + R +V+ +A+ A + RA + K DL Sbjct: 340 DLVAKLD--NVTFHEKIGSLSEHMKRSKVIAAYLAEKAGASAEENKALARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P ++P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPNSADGDLPETKVGALLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELVDNLYALSFDSLTYE 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R++ + ++ + D+ EA+L N + ++++ + ++K E + Sbjct: 518 HKAEVMDFIRARVEKMM-NKSVSKDIKEAVLAGSN---FVVAEMLEAADALVEASKAEGY 573 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + + + ++ + EK + + + + EK L +D ++ S K Sbjct: 574 KAAVESLSRVFNLAEKA--QAGVAVDANLFENDEEKALAQAAADL--NLTGSASDK---- 625 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L ++ I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 -LAQLFALSSVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|257452608|ref|ZP_05617907.1| glycyl-tRNA synthetase beta chain [Fusobacterium sp. 3_1_5R] gi|317059148|ref|ZP_07923633.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 3_1_5R] gi|313684824|gb|EFS21659.1| glycyl-tRNA synthetase subunit beta [Fusobacterium sp. 3_1_5R] Length = 687 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 178/725 (24%), Positives = 334/725 (46%), Gaps = 74/725 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EE PAR A +L + K E + + ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEENPARFLEPALAELKKNFMNKCKAERIAHGEVKMYGTPRRLILCAEEVAEQQ 62 Query: 64 PEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP +A GF +S G+ + I+ D KG+ A Sbjct: 63 EDLNELNIGPAKSIAFLNGEITRAGIGFAKSQGIDPVDLEIIQTD--KGEYIAARKSLQG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +L ++ + ++ +PKSM+WS + RP++ L + A ++++ Sbjct: 121 QATKTLLPELLKSLVLELSFPKSMKWSDLK-----IRFARPIEWFLAM-----ADSEVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ + N + GHRF V S++ Y + E V++D + R+ I D + Sbjct: 171 FEIEGMKSSNHSKGHRFFGKE-FTVNSVEDYFVKIRENNVIIDIQERKKMIREDILSKIA 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 ++V ++ LL E+ LVE+ +G+F+ +L +P+E++ ++++ +Q+ F + G Sbjct: 230 EDE-QVVIEEGLLSEVTNLVEYPYPIVGTFNSDFLEVPQEVLIISMEVHQRYFPILDKNG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L F+++ N + + GN +V++ARL DA F+K D N Sbjct: 289 KLLPKFVVIRNGI--EDSDNVRIGNEKVLSARLADARFFYKEDLRNH------------- 333 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--ALVDRAI 415 L+ + +L VVF +GT ++++R + + + + + + V R Sbjct: 334 -------LENNVEKLK--HVVFQKDLGTIYQKITRTQEICEILLAKLHLEEKRETVLRTA 384 Query: 416 VLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ E F +LQG +G +YA+ E I EH PR + +P Sbjct: 385 YLAKADLVSNMIGEKEFTKLQGFMGADYALKFGEKEEVSKGIREHYYPRFQGDELPQVVE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 I V +AD+LDTL+ + + PSGSKDP+ALRRA LGI+ IIL +K+D+ L + + Sbjct: 445 GILVGIADRLDTLVGCFGVGVIPSGSKDPFALRRAALGIVNIILNSKLDLSLRELVNASL 504 Query: 531 ----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 ++ ++ FF RL ++ + D++ A+L ++++ + + Sbjct: 505 DTLAKDGVLKRDRAEVEKEVMEFFKQRLINVFSEK-MDRDIVAAVLEVQSEDAMDAFTRM 563 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L F + + L AKR+ I + + E++ E EK LY Sbjct: 564 QALKAFLTEEGAKDLLDLAKRVGNISKEAKSR------EVNVTLFQQEEEKELYHYTEKT 617 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I+ + K Y + + E + +F+ V V ++ EV++NR+S L + ++ Sbjct: 618 KMEIESLVSDKNYAGYLAAVLASKEIVTKYFNAVKVMDENVEVQNNRISQLGLLSSLYQK 677 Query: 695 VINVQ 699 + ++ Sbjct: 678 LADLS 682 >gi|257065851|ref|YP_003152107.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus prevotii DSM 20548] gi|256797731|gb|ACV28386.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus prevotii DSM 20548] Length = 687 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 211/732 (28%), Positives = 356/732 (48%), Gaps = 76/732 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ + L L++E + +++ TP R + L + Sbjct: 1 MSNYLLEIGVEEIPSDYVKNTKKQLEDKFKKLIEENKLTCESISVESTPRRFAILLNNVE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 EK GP V G KK + GFLR G + KG+ Y+ V Sbjct: 61 ADLTEKTVSVKGPSVKIAYDEGGEPKKPLLGFLRGQGADLSD---VVIREFKGEDYIYVE 117 Query: 114 RKPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K K + + +VL+ V ++ + +P+SMRW+ + W RP++ + IL Sbjct: 118 KKEKSKSVAEVLRENVYELVKSISFPRSMRWAGK-----SIRWARPIRWFVSIL-----D 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++D D + I G +T GHR + I++ + +Y + L+E V+L + R++ IL Sbjct: 168 DEVLDFDAEGISVGRVTKGHRSLGSNHIEIDEIQNYEKLLKENYVILKYKDRKDIILRGL 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +RL+S VG E ++D+ LL+E+I +VE+ V +G DK YL +P+E+I +K +Q+ F Sbjct: 228 NRLSSEVGGEYMKDEALLDEVINIVEYPTVLIGGIDKDYLEIPKEVITTPMKDHQRYFPV 287 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L F++V N + +V+GN +V+ ARLEDA F++ D Sbjct: 288 LDENKNLLPYFLVVRNGD-EEFKENVVEGNKKVLVARLEDAKFFYEID------------ 334 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI--AQLIDADVAL 410 + KPL+ + L+ ++ F +G + R+ L ++ A I D+A Sbjct: 335 --------MKKPLEAYVDELE--NLAFFEGLGNMKLKTERLMDLTERYRQALAIGEDMAH 384 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSKADL T++V EF ELQG +G+ YA E AIEE PR +P Sbjct: 385 PIGRAAYLSKADLVTKMVVEFTELQGTMGRIYASKSGEEERVATAIEESYMPRSSGSALP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I +S+ADK+DT++ +AI + +GS+DP+ LRRA LGII I LEN IDI L + + Sbjct: 445 KTITGIILSIADKMDTIVGLYAIEKYVTGSQDPFGLRRACLGIINIFLENSIDIDLRKLV 504 Query: 530 EDQ-------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 D ++ FF DRLK L D + +D + +++ + N++ I Sbjct: 505 NDALLVYTEKNELAFDYDTAMDKVLDFFRDRLKNKLIDDGVSYDTVNSVINTDELNIIKI 564 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 V K ++ F E + RI + + + E+ + E+ Y Sbjct: 565 VKKAKSIDSFL--EDNEDQVSYFTRIVNL------SDYRVDAEVREDLFENDLERSFYEK 616 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 I++ S + + + + + E + D ++NVDD EV++NR+++L + Sbjct: 617 ITELE-DFSPSAEA-NFLEELNRIKETSEIGNTYLDNTMINVDDEEVKNNRIAMLNKLAR 674 Query: 691 IILIVINVQKIV 702 I ++++++IV Sbjct: 675 RIEQILDIKEIV 686 >gi|94986743|ref|YP_594676.1| glycyl-tRNA synthetase, beta subunit [Lawsonia intracellularis PHE/MN1-00] gi|226737057|sp|Q1MRM1|SYGB_LAWIP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|94730992|emb|CAJ54355.1| Glycyl-tRNA synthetase, beta subunit [Lawsonia intracellularis PHE/MN1-00] Length = 695 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 214/727 (29%), Positives = 337/727 (46%), Gaps = 64/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M F+LEI +EE+PAR + +L + + L+ G + Y TP RL + +KGL Sbjct: 1 MATFILEIGTEELPARFLLELQSELGVRFLDSLQSMGYRPTEVSDYSTPRRLVVCIKGLD 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P E +GP + G KA +GF ++ G+ S QI D +G+ + Sbjct: 61 MIQPHCEEVVIGPPINIAFDKDGNPTKAAEGFAKNLGITIGSLSQISTD--RGEYISGLK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 K ++VL + P I +P PK MRW F++IRP++ I+ +L ++ Sbjct: 119 VKGGIPTKEVLARLCPEIITALPLPKRMRWGNN-----PFTFIRPIRWIMALLDSD---- 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDA 232 I+ +L I T G R + I+V S Y L+E V+LDP R+++IL Sbjct: 170 -IVPFELAGIHSNRNTVGLRNNNVPFIEVPSSTDYYMLLKEVGNVILDPNSRKDSILQLG 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 ++ A +G + ++ LL E+IGLVE +G+ + +L LP E++ +I+T+QK F Sbjct: 229 NKEAQLIGGVVNWNERLLNEVIGLVEHPYPLLGTINSVFLNLPREVLLTSIETHQKSFGI 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F+ V N+ D A + QG RV+ ARLEDA FW D N Sbjct: 289 LDSQGNLLPYFLTVLNMTPPD-LALVKQGWERVLQARLEDARFFWNEDIN---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALV 411 D+ +L ++F +G+ ++ R+ +L + IA+ I ++ Sbjct: 338 ----------SSFDEWQEKL--THLIFLDPLGSIAQKEHRVSLLCEWIAKYIPTSNAEEA 385 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +A LSK DL +++V EFPELQG +G YA + E+ S AI E P GP +VP Sbjct: 386 RKAGSLSKVDLVSKMVEEFPELQGVMGGIYARHKGESESIATAIAEQYLPSGPDTDVPVT 445 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 + +S+ADK+DTL+ + P+G+ DPY LRR LGIIRI++E + I L Q Sbjct: 446 DLGAILSIADKIDTLVGCFGCGIIPTGTADPYGLRRCALGIIRILIEKEYPINLHQLYTR 505 Query: 532 ------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 Q L F RLK Y ++EAI+ + L +I D Sbjct: 506 AQDNFVNVSWKLAPEDVLQKLHEFIIARLKNYFLALGYDTLVVEAIVSTQTSQLWSIKDR 565 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVIS 632 + + + + KR+ I+ ++K+ ++ +P AEK L + Sbjct: 566 LDSFILLSQHEDFSQLVQTIKRVINIIKKQDKETEIVLTGHWNPSLFKDTAEKVLAEKLM 625 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + LL + I FFDQV++ +D EVR NRL+LL+ + I Sbjct: 626 IAVNKFNQESQTASLPVFMMLL-KLQPAINTFFDQVMIMSNDIEVRRNRLNLLKALLLYI 684 Query: 693 LIVINVQ 699 + + Sbjct: 685 ESLADFS 691 >gi|227485433|ref|ZP_03915749.1| glycine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227236563|gb|EEI86578.1| glycine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 687 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 203/731 (27%), Positives = 347/731 (47%), Gaps = 74/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ L LL E + Y+++ TP R + LK ++ Sbjct: 1 MHNYLLEIGVEEIPSDYVKNTKIQLKEKFEKLLSENKLSYEDVEIESTPRRFMVLLKNVA 60 Query: 61 PHSPEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + +++ GP +A+ GFL+ + I K+ K D Sbjct: 61 ETAQQEVISVRGPSAKIAYDEDNNPSRALLGFLKGQKAELSDV--IIKEQKGEDYVFVEK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + +E++LK V ++ + +P+SMRW + W RP++ + +L + Sbjct: 119 KEKSKSLEEILKENVYEIVKSISFPRSMRWGGK-----SIRWARPIRWFVSLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 K++D D + I GNIT GHR I ++++ Y L+E V+L + RR+ IL + Sbjct: 169 KVLDFDAEGIEVGNITKGHRTLGSDKIVIENISEYEAKLKENYVILRGKDRRDIILKGLN 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++S VG E ++D+DLL+E++ +VE+ V +G D YL LP E+I +K +Q+ F Sbjct: 229 SVSSQVGGEYMKDEDLLDEVVNIVEYPTVLVGEIDHSYLELPREVITTPMKDHQRYFPIL 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + L F LV N + +++GN +V+ ARLEDA F+ D N Sbjct: 289 DDKKKLLPYFCLVRNGDDYES-QNVIEGNKKVLVARLEDAKFFYDLDAAN---------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI--DAD-VAL 410 L+ + LD ++VF +G G++ R+ L + + D Sbjct: 338 ----------TLESYVKDLD--NLVFFEGLGNMGQKTKRLVELATSYQKELSLGDDIAED 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA LSKADL T +V EF ELQG +G YA+ EN AI+E P+ P Sbjct: 386 AKRAAYLSKADLVTRMVVEFTELQGTMGAIYALNSGENQRVATAIKEQYLPKNQNSETPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + I +++ADK+D+++ +AI +GS+DP+ LRRA LGII IILEN ID+ + + I Sbjct: 446 SVVGILLAIADKMDSIVGLYAIENYVTGSRDPFGLRRAALGIINIILENGIDVDIKKLIA 505 Query: 531 DQ-------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 + + F DRLK L D R+D++ +++ N+L + Sbjct: 506 EALLVYTEINALAFDYDKTMDETLTFIKDRLKNKLLDDGYRYDIVNSVINTNFTNILKMS 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + +K +++F + + L RI + E + EI L + E++ Y I Sbjct: 566 EKVKAVSDFIG--ENDDSLSYLIRINNLTKESEDR------EIREDLLETDLERKFYEEI 617 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + + Y + + + + + D ++NVD+ EV++NRL++L +K Sbjct: 618 TKLEN--FGLVSSADYKKELENIQATSLVGNDYLDNTMINVDNEEVKNNRLAMLNLLKRR 675 Query: 692 ILIVINVQKIV 702 + + ++ +IV Sbjct: 676 MAKIFDISEIV 686 >gi|256545607|ref|ZP_05472965.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus vaginalis ATCC 51170] gi|256398684|gb|EEU12303.1| glycyl-tRNA synthetase, beta subunit [Anaerococcus vaginalis ATCC 51170] Length = 689 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 213/731 (29%), Positives = 355/731 (48%), Gaps = 72/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +LLEI EE P+ + + L L++E + + ++ TP R + L GL Sbjct: 1 MSKYLLEIGVEEFPSAYINSTKKQLEEKFKKLIEENKLSVEEIKVESTPRRFAILLDGLE 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + ++ GP G KA+ GFLR + I KD K + Sbjct: 61 ENKSNELISVKGPSKKIAYDNEGNPSKALLGFLRGQKAEVSDV--IIKDFKGEEYIYVEK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ I++VL+ V ++ + +P+SMRW + + RP++ L +L + Sbjct: 119 KEESLSIKEVLQKNVYDLVKSLNFPRSMRWGGR-----SIRFARPIRYFLSLL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I++ D + I N T GHR I V+ +++YI L E V+L + RR IL + Sbjct: 169 EILEFDAEGIKVSNTTKGHRVLGKSEILVEKIENYIELLRENYVILSYKERREIILRGLN 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 R A +G + ++D+DLLEE+I +VE+ V MG D++YL LP+E+I +K +Q+ F Sbjct: 229 RYAKEIGGKFLKDEDLLEEVINIVEYPTVLMGELDQEYLKLPKEVIVTPMKDHQRYFPIV 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L F+LV N ++ GN +V+ ARLEDA F+ D N Sbjct: 289 DDNEKLMPYFLLVRNGD-DFAKENVINGNKKVLTARLEDAKFFYDIDNN----------- 336 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVAL- 410 K L+ + L+ L F +G+ ++ R+ L K + DV+ Sbjct: 337 ---------KKLEDYVEELNRL--TFFEGLGSVYQKTERLISLSKNYLDEFKLGEDVSDN 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA LSKADL T++V EF ELQG +G+ YA EN +AIEE KPR +++P Sbjct: 386 LLRAAYLSKADLVTKMVIEFTELQGIMGRIYATNSGENSQVANAIEEAYKPRSSEDSLPK 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + I +S+ADK+DT+ + I +GS+DP+ LRR+ +G+I II +NKID+ L I+ Sbjct: 446 SVAGIVLSIADKIDTIAGLYIIENYVTGSQDPFGLRRSAIGVINIIADNKIDVDLKDLIK 505 Query: 531 D-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 D + ++ FF DRLK L D+ R+D + A+L N+L+++ Sbjct: 506 DALFVYTEKNEISFDYDKTLEKIVEFFIDRLKNMLIDKGYRYDFVNAVLATGETNILSVI 565 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + +K + EF E+ L RI E + E++ + L EK+ Y +I Sbjct: 566 EKVKSVEEFVEKENSEEILNYFTRINNFTKDFE------NTEVNVEILDQGLEKQYYDLI 619 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + K Y + + + S + + D ++ V+D ++++NRL+LL + Sbjct: 620 ENL--DCEKYLSQKLYTKALEEIASTMDLGNEYLDNTMIMVEDEQLKNNRLALLNKLATN 677 Query: 692 ILIVINVQKIV 702 I + N++ +V Sbjct: 678 ISRIFNIKDLV 688 >gi|297734621|emb|CBI16672.3| unnamed protein product [Vitis vinifera] Length = 1071 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 178/720 (24%), Positives = 332/720 (46%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI +EE+P + A++ L +++ LL ++ + + ++ + TP RL + +K LS Sbjct: 390 FLLEIGTEELPPQDVASASQQLKDLIMQLLDKQRLGHSEVQAFGTPRRLVVCVKNLSTKQ 449 Query: 64 PEKIEERLGPRVG-------AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E E GP V KA +GF R + D KK K + + + Sbjct: 450 AENEVEVRGPPVSKAFDGQRNPTKAAEGFCRRYCVSL--DSLYKKVDGKTEYVYVRVMES 507 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL +VL +P I K+ +PKSMRW+ S + RP++ IL + + ++ Sbjct: 508 ARLALEVLSEDLPRIIAKISFPKSMRWN------SQVMFSRPIRWILAL-----HGDVVV 556 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + GN++YG R + IKV+S + Y + A + LD E R+ IL + LA Sbjct: 557 PFMFAGVLSGNLSYGLRNTSSATIKVESAESYATVIRNAGISLDIEERKQTILEQCNALA 616 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 V ++ LL+E++ LVE +G F + +L LP++L+ + ++ +QK F Sbjct: 617 KGVNGHILLQGSLLDEVVNLVEAPVPVIGKFKESFLELPKDLLTMVMQKHQKYFAITDDS 676 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D + Sbjct: 677 GRLLPYFITVANGAINEM--VVRKGNEAVLRARYEDAKFFYEMDTRKKFSEF-------- 726 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK--IAQLIDAD-VALVDR 413 R + ++FH K+GT +++ R++ + + +A ++ D + ++ Sbjct: 727 --------------RSQLEGILFHEKLGTMLDKMIRVQNMVAELSLALQVNEDKLQIIQD 772 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + VP + Sbjct: 773 AASLAMSDLATAVVTEFTSLSGIMARHYALRDGYSEQIAEALFEITLPRNSGDIVPKTDV 832 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 I +++AD+LD+L+ + +PS + DP+ LRR + G++++++E ++ L ++ Sbjct: 833 GIVLAVADRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQVLVEKDKNLDLRHALQLAA 892 Query: 534 LI--------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F RL+ +L DR+I +++ +IL + ++ Sbjct: 893 AVQPITIEANIIDDVHQFVTRRLEQFLVDREISPEVVRSILTERANWPCLATKSAYKMDA 952 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + + R +I+ K+ E +E+ E+ L+ I Sbjct: 953 MSRGELLPKVVEAYSRPTRIVR---GKDVEADMEVDEASFETNEERALWRAFLSVRNKIY 1009 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L +P+E FF+ V V V++ +R NRL+LL+ I ++ + ++ Sbjct: 1010 PGIEVDDFFEASSQLL---QPLEDFFNNVFVMVEEERIRKNRLALLKKIADLPKGIADLS 1066 >gi|139439748|ref|ZP_01773139.1| Hypothetical protein COLAER_02170 [Collinsella aerofaciens ATCC 25986] gi|133774898|gb|EBA38718.1| Hypothetical protein COLAER_02170 [Collinsella aerofaciens ATCC 25986] Length = 698 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 211/734 (28%), Positives = 322/734 (43%), Gaps = 76/734 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 DFL EI +EE+P+ + A + L ++ L E G+ + +R +P RL + ++ Sbjct: 5 KDFLFEIGTEEMPSAPLNNAVKQLGTMIAKGLDEAGLAHGEVRVISSPRRLAALVANVAT 64 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E E + GP G KA GF R G+ D ++D + A Sbjct: 65 ATDEVHEVKRGPAANIAFDADGNATKAAQGFARKCGVAA-EDLVRREDTDGREYVFAEKN 123 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 P +L ++ I + WP +S RW H+ +++RP++ I C+L Sbjct: 124 IPSAPATPILTSLCEKTIAGLQWPNYRSQRWGHEHA-----TFVRPVRWICCLL-----G 173 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 E ++ + ++ GN T GHR P V S Y + LE+A V L E RR AIL Sbjct: 174 EDVVPVSFADVTSGNTTRGHRVLGPGDHVVASPAVYEQVLEDAGV-LSAERRREAILAGI 232 Query: 233 HRL-ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A+ G + K + EE+I L EW V +G+FD+++L +P E+I ++ TNQ+ F Sbjct: 233 AEVEAARPGCHVDTPKKVFEEVINLCEWPTVLVGTFDEEFLKVPHEIICESMLTNQRYFP 292 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L F++VSN + + ++ GN RVV ARL+DA F++ D Sbjct: 293 IYDGEGKLTREFVVVSNSKPENA-ERVIDGNERVVRARLDDAKFFYEED----------- 340 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADV 408 L LD+ RL V F K+G+ + RI L IA L Sbjct: 341 ---------LKISLDEFRERL--AKVAFQEKLGSVLAKSERIEQLALAIAREAHLGAHLA 389 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A RA L KADL + V EF QG +G YA+ EN AI +H +PR + + Sbjct: 390 ADAARAAHLCKADLVSNAVVEFTSQQGVMGGYYAIAMGENDGVAHAIRDHYRPRFAGDEL 449 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P V+ ADKLDT+ +AI E P+GS DPYALRRA +GII I+ + + I + Sbjct: 450 PEGTAGCIVACADKLDTIAGIFAIGEPPTGSSDPYALRRAAIGIINILRDR-LPIDPTSL 508 Query: 529 IED------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 I+ Q + FFH RL D + D + A+ Sbjct: 509 IDFALELYSEQGIEFDAAEVAQQVRDFFHGRLVSMARDEKVPADTVAAVSAVHIIAPSVF 568 Query: 571 VDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 L+E + + + R I E + S L+ E E L Sbjct: 569 FARCAALDEARKNDAETFDNLATAYARAAHISKPELGVEYDRS-------LMGEVELELA 621 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 T + ++ + Y L ++ PI+ FFD+V+V D ++RDNRL LL Sbjct: 622 DASEAAQTAVDAALAAEDYPAAFAALAALRAPIDRFFDEVMVMDKDEQLRDNRLKLLNRF 681 Query: 689 KNIILIVINVQKIV 702 + + + N+ ++ Sbjct: 682 EAVFSGIANIGELA 695 >gi|319796019|ref|YP_004157659.1| glycyL-tRNA synthetase, beta subunit [Variovorax paradoxus EPS] gi|315598482|gb|ADU39548.1| glycyl-tRNA synthetase, beta subunit [Variovorax paradoxus EPS] Length = 711 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 207/736 (28%), Positives = 347/736 (47%), Gaps = 69/736 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E++ EE+P + K + + +L L +G+ + Y +P RL +L ++ Sbjct: 7 LLVELFVEELPPKALKKLGDAFAGVLRDQLVAQGLAEAGSVLIAYASPRRLAAHLTHVAE 66 Query: 62 HSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVL 113 + +K + ++L P G A+ L + G + +K+ K + Sbjct: 67 RAADKAVSQKLMPVAVGLDASGQPTPALLKRLGALGADASAVPGLKRAMDGKAEALFYES 126 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRW----STTHSPISAFSWIRPLKSILCILVAE 169 + + L+ + AI K+P PK M + S+ S++RP ++ + Sbjct: 127 TAKGATLAEGLQKALAEAIAKLPIPKVMSYQLESGCELPGWSSVSFVRPAHGLVAL---- 182 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEE-AMVLLDPECRRNA 227 + ++ ++ + G T+GHRF A P+ ++ + Y L++ V+ E RR Sbjct: 183 -HGDAVVPIEALGLKAGRETHGHRFEAAVDPVVLRDANSYALQLQDDGAVIASFEARRAE 241 Query: 228 ILNDAHRLASAVGL--ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKT 285 I A VG + D LL+E+ LVE V + SF++++L +P+E + LT+K Sbjct: 242 IARQLAAAAVKVGGGSVPIHDDALLDEVTALVERPNVLVCSFEREFLEVPQECLILTMKA 301 Query: 286 NQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 NQK F L N F++VSNI D +A+++GN RVV RL DA F+ +D+ Sbjct: 302 NQKYFPLLDASSKLTNKFLVVSNISPDDA-SAVIEGNERVVRPRLADAKFFFDQDRK--- 357 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 K L R+ L VV+H K+GTQGERV R+ + + IA+ + Sbjct: 358 -----------------KSLASRVESLG--KVVYHNKLGTQGERVQRVMHIARGIAEKLG 398 Query: 406 --ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRG 463 A +A L+KADL T++V EFPELQG +G+ YA+ + + DAIE+H KPR Sbjct: 399 DAKVAAQATQAAQLAKADLVTDMVGEFPELQGTMGRYYALHDGLDAAVADAIEDHYKPRF 458 Query: 464 PLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI 523 + +P N + + V+LADKL+TL+ + I P+G +DP+ALRR LG+IR+++E + + Sbjct: 459 AGDELPRNSVGLVVALADKLETLVGMFGIGNLPTGDRDPFALRRHALGVIRMLIEKDLAL 518 Query: 524 PLSQFIEDQNLI-----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 L ++D F DRL L ++ ++A+L P Sbjct: 519 GLDTLLQDAAAQFKDIAGFDSSKATVELRDFILDRLAGSLREQGASAQEVDAVLAPLPQR 578 Query: 567 LLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKR 626 L + L+ + F + + KRI IL KK E +S L AEK Sbjct: 579 LGEVPKLLAAVRAFAALPAAAALAAANKRIGNIL----KKAPEADAHVSELLLQEPAEKA 634 Query: 627 LYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQ 686 L+A +++ + Y L ++ EP++ FFD V+VN + ++R NRL LL Sbjct: 635 LHAAMAEVVPAANVQFEAGDYTGSLQTLAALREPVDAFFDGVMVNAEQADLRLNRLGLLM 694 Query: 687 YIKNIILIVINVQKIV 702 + + V ++++ Sbjct: 695 SLHTAMNRVAQLERLA 710 >gi|139473280|ref|YP_001127995.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes str. Manfredo] gi|229558581|sp|A2RD24|SYGB_STRPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|134271526|emb|CAM29749.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes str. Manfredo] Length = 679 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 334/713 (46%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L E +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLLDDEALDLD-----FLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGKET-TITSADSYEDDLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L + A VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVHVDPSLFENEQENTLFAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 626 --LEQVFVLSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|15675548|ref|NP_269722.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes M1 GAS] gi|71911197|ref|YP_282747.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS5005] gi|25009338|sp|Q99YI4|SYGB_STRP1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|13622750|gb|AAK34443.1| putative glycyl-tRNA synthetase (beta subunit) [Streptococcus pyogenes M1 GAS] gi|71853979|gb|AAZ52002.1| glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS5005] Length = 679 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 197/713 (27%), Positives = 337/713 (47%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L ++ ++LD +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGTET-TITSADSYEADLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R + G L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L +V VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LA K Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALAAK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + L + + + Sbjct: 517 ANKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAAAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+++ P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V D+ +++NRL++L + + ++ ++ Sbjct: 626 --LEQVFALSPVINDFFDNTMVMAGDQALKNNRLAILSDLVSKAKTIVAFNQL 676 >gi|168058267|ref|XP_001781131.1| predicted protein [Physcomitrella patens subsp. patens] gi|162667449|gb|EDQ54079.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1124 Score = 638 bits (1646), Expect = e-180, Method: Composition-based stats. Identities = 174/725 (24%), Positives = 328/725 (45%), Gaps = 72/725 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 F+LEI SEE+P + A L ++ LLKE+ + + ++ TP RL + ++ L+ Sbjct: 439 TFVLEIGSEELPPQDVSSAISQLKGVVPSLLKEKRLQHGSISVQGTPRRLVVMVEELATQ 498 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + +E GP G KA +GF + G++ + K D K + A++++ Sbjct: 499 QDDNEKEVRGPPAAKAFDAEGNVTKAAEGFCKKNGVRK-EELYTKTD-GKTEYVFAIVKQ 556 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K+ VL +PV + + +PK+MRW+ S S+ RPL+ +L + + I Sbjct: 557 QKKSSVQVLAEEIPVLLANLSFPKTMRWN------SQASYSRPLRWLLAL-----HGDTI 605 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G R I+V + Y+ +EA +++ + R ++I + L Sbjct: 606 VPFTYANVRSGRSCRVLRNSFQPTIQVAKAEDYVEATKEAGLVISMKERMDSIWAQSSEL 665 Query: 236 ASAVGLELVEDK---DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A++V L+ D+ LLEE+ LVE +GSF++ +L LP +++ ++ +Q+ F Sbjct: 666 AASVNG-LIPDEFKGGLLEEVANLVESPNPLLGSFNESFLKLPSDVLTTVMRKHQRYFPV 724 Query: 293 RTR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 R G L FI V+N Q A + +GN V+ AR EDA F++ D Sbjct: 725 VDRLNGQLLPAFITVANGQID--QAVVRKGNEAVLRARYEDARFFYEADT---------- 772 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---V 408 SKPL L + F K+G+ ++ R+ + A + D + Sbjct: 773 ----------SKPLADYRPLLQ--GITFQEKLGSMLDKSKRVEAMVDAFASALGLDEASL 820 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A+ +A L+ ADL T +V+EF L G +G+ YA+ + + DAI EH PR +++ Sbjct: 821 AIARQAAPLATADLATAMVKEFTSLSGIMGRHYALREGQPPQVADAIFEHALPRSAGDSL 880 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + +++ D+LD+L+ +A+ +P+ + DP+ LRR+ G+++ ++ N + LSQ Sbjct: 881 AKTDAGVLLAVVDRLDSLVGLFAVGCQPTAAADPFGLRRSAYGLVQTLVANGKVLDLSQA 940 Query: 529 IEDQNLIL--------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + + F RL+ L D + ++L + Sbjct: 941 LRFAADVQPLPVPDKVIDEVLIFIARRLEQLLVDGGANVVNVRSVLSERGTVPTLAARSV 1000 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L + ++ + + R +I+ K+ + S +++ + E L+ Sbjct: 1001 SQLETLATGEALDRVVAAYARPTRIVR---GKDVDPSWKVNEDLFAVPEEIALWDAYKQT 1057 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 + + +D + + + EP+E FF V V ++ ++R+NRL+LL + N+ Sbjct: 1058 ASKLHTGVDVNVFVEASQA---LVEPLEAFFKNVFVMAEEEDLRNNRLALLSSVANLPRG 1114 Query: 695 VINVQ 699 + ++ Sbjct: 1115 IADLS 1119 >gi|195977628|ref|YP_002122872.1| glycyl-tRNA synthetase subunit beta [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974333|gb|ACG61859.1| glycyl-tRNA synthetase beta chain GlyS [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 680 Score = 638 bits (1645), Expect = e-180, Method: Composition-based stats. Identities = 193/712 (27%), Positives = 320/712 (44%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK + Y + + TP RL + + GL+ + E+ GP Sbjct: 16 PAYVVTPSEKQLVQRMTDFLKANRLSYNAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGP 75 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 KA GF+R GL I+ KG+ Y+ V + + Sbjct: 76 SKKIALDADGQFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKQAKDVLA 132 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 VP + + +P SM W+ +F +IRP+ S++ +L ++ ++LD +I G Sbjct: 133 AVPEVLASLTFPVSMHWANN-----SFDYIRPVHSLIVLL-----DDEPLELDFLDIHSG 182 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF + S D Y DL V+ + R+ I+ + + +++ D Sbjct: 183 RISRGHRFLGEET-SITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDID 241 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 ++LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 242 ENLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISV 301 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLED FW+ DQ ++ Sbjct: 302 RNGNAK-HLQNVIKGNEKVLVARLEDGEFFWREDQKL--------------------SIE 340 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L V FH KIG+ E + R +V+ +A A+ + V RA + K DL Sbjct: 341 DLVAKL--AHVTFHEKIGSLAEHMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLL 398 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P K+ ++LADKL Sbjct: 399 TGMVGEFDELQGIMGEKYALLAGEAAAVATAIREHYLPDSAEGELPETKVGAVLALADKL 458 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + Sbjct: 459 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWSIPMDKLIDSLYELSFDSLTYQ 518 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + I D+ EA+L + + ++ K L + Sbjct: 519 HKAEVLDFICARVDKMMGSA-IPKDIREAVLASSSFVVPEMLARAKALVAASQLDTYKPA 577 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R+F + + I + E+ L + + + Sbjct: 578 VESLSRVFNLAKKAVDA-----VLIDASLFENDYERALAQAVDSL-------VLSGSAKE 625 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ I+ FFD +V +D +R NRL+LL + + + ++ Sbjct: 626 QLAQVFALSPVIDDFFDHTMVMTEDEAIRRNRLALLAELVTKVQTIAAFDRL 677 >gi|50914778|ref|YP_060750.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10394] gi|73919752|sp|Q5XAJ6|SYGB_STRP6 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|50903852|gb|AAT87567.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10394] Length = 679 Score = 637 bits (1644), Expect = e-180, Method: Composition-based stats. Identities = 199/713 (27%), Positives = 334/713 (46%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + +++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDADGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L E +I Sbjct: 132 G-VTEVLSAMTFPVSMHWANN-----SFEYIRPVHTLTVLLDDEALDLD-----FLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ L G+++ Sbjct: 181 GRVSRGHRFLGKET-TITSADSYEDDLRSQFVIADAKERQEMIVEQIKTLEVEQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D+DLL E++ LVE+ FMGSF+ KYL +PEE++ ++K +Q+ FV R +EG L F+ Sbjct: 240 DEDLLNEVLNLVEFPTAFMGSFEAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFVS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L + A VDRA + K DL Sbjct: 339 ADLVAKL--TNVTFHEKIGSLAEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLAY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + D+ EAIL + ++ + + L + + + Sbjct: 517 TNKADVMNFIRARVDKMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKP 575 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + S R F + + S+ + P E E L+A I + Sbjct: 576 AVESLSRAFNLAEKA-----DASVHVDPSLFENEQENTLFAAIQGLTLAGSAAQQ----- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + I FFD +V +D+ +++NRL++L + + + ++ Sbjct: 626 --LEQVFVLSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676 >gi|262065838|ref|ZP_06025450.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium periodonticum ATCC 33693] gi|291380421|gb|EFE87939.1| glycyl-tRNA synthetase, beta subunit [Fusobacterium periodonticum ATCC 33693] Length = 687 Score = 637 bits (1644), Expect = e-180, Method: Composition-based stats. Identities = 187/727 (25%), Positives = 342/727 (47%), Gaps = 72/727 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L EI EEIPAR +A +L LK + Y+ ++ Y TP RL L + ++ Sbjct: 3 LLFEIGMEEIPARFLSQALTELKSNFEKKLKNNRIKYEGIKTYGTPRRLVLVVDEVADMQ 62 Query: 64 PEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 + E +GP + G KA +GFL + + +K D KG+ Sbjct: 63 EDLDELNIGPSRERAYKDGELSKAGEGFLNAYKIDESQIEIVKND--KGEYIAFKRFAKG 120 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 E +L I+ + + +PKSM+WS + RP++ +L + +++ Sbjct: 121 EATEKLLPEILKELVLEETFPKSMKWSDK-----TIRFARPIEWLLALY-----GNNVVE 170 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 +++ I N + GHRF +V S++ Y+ + E V++D RR I ++ Sbjct: 171 FEIEGIKSSNKSKGHRFFGKE-FEVSSVEDYLNKIRENNVIIDISERRKMIEEMIDKVLL 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + D+ LL+E+ LVE +G+F + +L +P+E++ +++K +Q+ F ++G Sbjct: 230 EDE-KADIDEGLLDEVTNLVEHPFAIVGTFSEDFLEVPQEVLIISMKVHQRYFPILDKKG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L FI++ N D + +GN +V++ARL DA F++ D Sbjct: 289 KLLPKFIVIRNGI--DFSQNVKEGNEKVLSARLADARFFYQED----------------- 329 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAI 415 L PLDQ + +L VVF +GT +V R + + + + + A + R + Sbjct: 330 ---LKIPLDQNVEKLKT--VVFQKDLGTMFNKVKRTEKIAEFLIGKLKYNYMKADILRTV 384 Query: 416 VLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 L+KADL + ++ E F +LQG +G +YA+ + E I I+EH PR + +P+ Sbjct: 385 KLAKADLVSNMIGEKEFTKLQGLMGSKYAMERGEEIGVAIGIKEHYYPRFQGDLLPSGIE 444 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGI------------IRIILENKI 521 I L+D++DTL+ + + P+GSKDP+ALRR LGI ++ ++ + Sbjct: 445 GIITGLSDRIDTLVGCFGVGLIPTGSKDPFALRRTALGIVNIIINANINISLKELVNVSL 504 Query: 522 D-------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 D + + + +++ F R+ D R D++ A+L + DN+ ++++ Sbjct: 505 DALQADQVLKGDRAKVEADVLDFLKQRMINVFTDMKYRKDIVLAVLDRDADNITNALEIV 564 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 K ++E + K E L AKR+ I+ ++ + + E EK L+A Sbjct: 565 KVISEKLALNKLEALLQVAKRVTNIITK-----GNNNVTVKEKLFKEEIEKTLFAEAKKI 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ++S+ Y + + S+ I+ +F+ V+V +D+ +R+NR++ L +IKN+ Sbjct: 620 AEEAEKSIKENEYADYFEKMISLVPTIDKYFETVIVMDEDKNIRENRINQLTFIKNLFDR 679 Query: 695 VINVQKI 701 + + KI Sbjct: 680 IAYLNKI 686 >gi|254441837|ref|ZP_05055330.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 307] gi|198251915|gb|EDY76230.1| glycyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 307] Length = 752 Score = 637 bits (1644), Expect = e-180, Method: Composition-based stats. Identities = 273/778 (35%), Positives = 392/778 (50%), Gaps = 105/778 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L+E++SEEIPARMQ KAA DL ++ L + G+ Y + TP RL L ++GL+ Sbjct: 1 MPDLLIELFSEEIPARMQAKAAADLQKLVTNGLVDAGLTYAGAGAFCTPRRLALSVEGLT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P SP+ EER GP+VGA AIDGF R G+ D +D KG+V+ AV++KP R Sbjct: 61 PESPDTREERKGPKVGAPDGAIDGFCRGAGVS--RDTLEVRDTGKGEVHFAVIQKPGRKA 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ ++ AI+ PWPKSMRW T + W+RPL SI+CIL ++ ++ + + Sbjct: 119 ADIIADVLEGAIRSFPWPKSMRWGTG-----SLKWVRPLHSIICIL-TDEGGANVVAMSV 172 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I GN T GHRF AP I V S + Y L+ A V+L + R + I ++A A A G Sbjct: 173 DGIAAGNTTLGHRFMAPDKIPVTSFNDYEARLKRAKVILRADERADLIWSEASNQAFAAG 232 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 LELVEDK LL E+ GLVEW V MG+ +L LP E++ ++K +QK F R + G + Sbjct: 233 LELVEDKGLLAEVAGLVEWPVVLMGTIANDFLNLPPEVLTASMKEHQKFFSVRDKSGQIV 292 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F+ V+N + +DGG I+ GN +V+ ARL DA FW+ D L K L + Sbjct: 293 -RFVTVANRETADGGKTILAGNQKVLFARLSDAKFFWEND------LRIAKTGGLAWLDA 345 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L +V FH K+GT E V R+ L ++IA L+ AD + A +KA Sbjct: 346 LG-------------NVTFHNKLGTVAELVDRMAALSREIAPLVGADPDEAEAAARFAKA 392 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFP+LQG +G+ YA + + A +EH P GP ++VPT +SI V+LA Sbjct: 393 DLSSEMVYEFPDLQGLMGRYYAGEAGLSDAVALAAQEHYSPLGPSDDVPTAPVSIAVALA 452 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS-------------- 526 +K+D L FWAI+EKP+GSKDP+ALRRA LG+IR+ILE K + L+ Sbjct: 453 EKIDKLTGFWAIDEKPTGSKDPFALRRAALGVIRVILETKRSLNLTFLFGLGLEKQHLLA 512 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEA----------ILRPE------------- 563 I F L L D R L+ + +L+ Sbjct: 513 ALGGAYENIQFEVAALTKKLADPSYRGSLLTSSREDLERDLPVLKLRMETSMSKLEEYKS 572 Query: 564 ------NDNLLTIVDLIK-----------HLNEFFSSAKGEKFL---------------- 590 D L D +K ++ + + + L Sbjct: 573 YLIEVPFDLLAFFHDRLKVYLKDEGVSHDVIDASLAMPRNDDLLLLVNRAKALAAFLKTD 632 Query: 591 ------LSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 KR IL+ E K+ E S ++ +AEK L+A + I +M Sbjct: 633 DGVNLIQGFKRANNILSQAEDKDGVEYSYGADIKFADGDAEKALFAALDAADAKIAPAMA 692 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + + + PI+ FFD V +N D +R NRL+LL I+ I L V +++K+ Sbjct: 693 AEDFASAMSAMADLRGPIDAFFDTVQINADSELLRRNRLNLLHRIRTICLSVADLRKL 750 >gi|78777189|ref|YP_393504.1| glycyl-tRNA synthetase subunit beta [Sulfurimonas denitrificans DSM 1251] gi|78497729|gb|ABB44269.1| Glycine--tRNA ligase [Sulfurimonas denitrificans DSM 1251] Length = 673 Score = 637 bits (1644), Expect = e-180, Method: Composition-based stats. Identities = 192/720 (26%), Positives = 344/720 (47%), Gaps = 69/720 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L+EI EE+PA + +++ +L++ ++ N Y+TP RL L+ + Sbjct: 3 KTLLIEIGVEELPAVPLLRELKNIEKKYADILEKHSLL-GNFEFYYTPRRLVLWHREFKS 61 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 E +EE G + G A GF + G+ KD K +V Sbjct: 62 MQDESVEEFFGAPLSVAYKDGVATPAALGFAKKCGVGIDEITTTIKDNK--EVIYYKRAL 119 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L TI+ I + + KSMRW + S+IRP++ + L +++ Sbjct: 120 MAKESSHLLPTIIKEWIDSLEFGKSMRWGSLQE-----SFIRPIRWVNVQL-----ADEL 169 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D+++ + T+ HR I++ Y LE+ V L R I+ D + Sbjct: 170 VDMEIFGVKSAKKTFVHRISNFEAIEINGAKEYFEVLEDGGVTLFATQREKKIVEDFASI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G+++ DK+LL+E++ + E +GSFD+++L LP E+I ++K +Q+ F + Sbjct: 230 EKENGVKIEIDKELLDEVVAITENPTAILGSFDEEFLKLPPEVIITSMKEHQRYFPVF-K 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N F++VSN +D + +++GN RV+ RL DAL F+ D + + L++ Sbjct: 289 DGKLINRFVVVSNAFTNDF-SKVIEGNERVLRPRLSDALFFYNNDLKKGLSTAGLEK--- 344 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---IDADVALVD 412 VVF +G+ +++ R R + + + + + +D Sbjct: 345 ---------------------VVFMKGLGSVADKIERERKIAHALFDIYKPLHVTLEELD 383 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 R+I L+KADL +E+V EF ELQG +G YA L E+ + AI E P G +P+NK Sbjct: 384 RSITLAKADLMSEMVYEFTELQGLMGSYYASLLGESQNVATAIREQYLPDGEDSALPSNK 443 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF---- 528 +S V+++ KLDTL+ ++IN+ P+GS+DP+ALRRA G+IR+ E+ ++ + + Sbjct: 444 MSAIVAMSLKLDTLLGLFSINQIPTGSRDPFALRRAVNGLIRVTKEHDLEFDIVKTLTLL 503 Query: 529 ------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFS 582 + L FF +R++ Y + ++EA+L LL I I L + Sbjct: 504 SKNYDSFDISKLEAFFLERVRQYFK---VNPSIVEAVLISGERELLRISKKISALESMVN 560 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 S ++ + KR+ I + N + I+ + AE L+ ++ ++ Sbjct: 561 SQGFSEYFSTFKRVANITKDIDMSNIKA---INEKLFENSAEDALFKRYNEVC-----AI 612 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + Y + D L S+ ++ FF+ V+VN +D +R+NR +L+ I IL + ++++I Sbjct: 613 SYNSYEEELDALFSLKRELDSFFNDVMVNAEDESIRENRKALIASIYKSILKIADIKEIA 672 >gi|320547918|ref|ZP_08042201.1| glycyl-tRNA synthetase beta subunit [Streptococcus equinus ATCC 9812] gi|320447458|gb|EFW88218.1| glycyl-tRNA synthetase beta subunit [Streptococcus equinus ATCC 9812] Length = 679 Score = 636 bits (1642), Expect = e-180, Method: Composition-based stats. Identities = 197/712 (27%), Positives = 338/712 (47%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LKE+ + ++ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGDRMAAFLKEKRLAFEGIQTFSTPRRLAVRVLGLADAQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL T I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGNFTKAAQGFVRGKGLTTDD---IEFREVKGEEYVYVTKHETGKAAKEVLV 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P +M W+ F +IRP+ ++ +L E +I G Sbjct: 132 DIPEILSAMTFPVNMHWANN-----TFEYIRPVHTLTVLLDDEALDLD-----FLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF ++ S D Y DL + V+ D + R++ I+N + A + + D Sbjct: 182 RVSRGHRFLGHET-EIASADSYEEDLRKVFVIADAKERQDMIVNQIKAIEKAENVRVEID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +LL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +G L FI V Sbjct: 241 DELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDLDGNLMPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N +++GN +V+ ARLED FW+ DQ + Sbjct: 301 RNGN-EKHIENVIKGNEKVLVARLEDGEFFWREDQKL--------------------KIA 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 +A+LD +V FH KIG+ E +SR +V+ +A+ A + RA + K DL Sbjct: 340 DLVAKLD--NVTFHEKIGSLSEHMSRSKVIATYLAEKAGASAEESKALARAAEIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E+ + AI EH P N+P K+ ++LADKL Sbjct: 398 TSMVGEFDELQGIMGEKYALLAGEDAAVAIAIREHYLPNSAEGNLPETKVGALLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DT+++F+++ PSGS DPYALRRAT G++RI+ + IP+ + Sbjct: 458 DTILSFFSVGLIPSGSNDPYALRRATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTYE 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R++ + + + D+ EA+L N + ++++ + ++K E + Sbjct: 518 HKAEVMDFIRARVEKMMS-KSVSKDIKEAVLASSN---FVVAEMLEAADALVEASKAEGY 573 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + + + ++ + EK ++ + + EK L +D ++ S K Sbjct: 574 KAAVESLSRVFNLAEKAQEGVA--VDASLFENDEEKALAQAAADL--NLAGSASDK---- 625 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 L + I+ FFD +V VD+ V++NRL++L + V K+ Sbjct: 626 -LAQLFVLSSVIDKFFDNTMVMVDNEAVKNNRLAILAELTAKASSVAAFNKL 676 >gi|157415497|ref|YP_001482753.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81116] gi|157386461|gb|ABV52776.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni 81116] gi|307748139|gb|ADN91409.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni M1] gi|315932379|gb|EFV11322.1| glycyl-tRNA synthetase beta subunit [Campylobacter jejuni subsp. jejuni 327] Length = 664 Score = 636 bits (1641), Expect = e-180, Method: Composition-based stats. Identities = 185/718 (25%), Positives = 334/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNVLEEYRLV-NDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ ++ K+ K +V Sbjct: 60 EKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGIS-ENELTFKEIKGK-EVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW +F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMIEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPNKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPGEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++A+L +N +L+ I + L E Sbjct: 502 SHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIELSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY QE Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|86152952|ref|ZP_01071157.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612141|ref|YP_001000908.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|167005821|ref|ZP_02271579.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|85843837|gb|EAQ61047.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249824|gb|EAQ72783.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 81-176] Length = 664 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 185/718 (25%), Positives = 334/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ ++ K+ K +V Sbjct: 60 EKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGIS-ENELTFKEIKGK-EVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW +F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMIEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++A+L +N +L+ I + L E Sbjct: 502 SHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIELSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY QE Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|259046827|ref|ZP_05737228.1| glycyl-tRNA synthetase, beta subunit [Granulicatella adiacens ATCC 49175] gi|259036450|gb|EEW37705.1| glycyl-tRNA synthetase, beta subunit [Granulicatella adiacens ATCC 49175] Length = 689 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 192/716 (26%), Positives = 338/716 (47%), Gaps = 70/716 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ ++E L+ + K+E + +++ + TP RL + + GL ++ E GP Sbjct: 15 PAQYVRTSSEQLAKRVEDFFKDENLEFESFEAFATPRRLAVRVNGLVEEQADREEIFKGP 74 Query: 74 RV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTI 127 + GA KA +GF+R GL T I + G Y+ V + + Sbjct: 75 SLAIAQKDGAWTKAAEGFVRGKGLTTDD---IYVEEVNGVEYIHVKQHIAGKSTKEVVKN 131 Query: 128 VPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGN 187 + I + +P +MRW+ F ++RP+ I+ + E +E + + ++ G Sbjct: 132 LSSVITDMKFPVTMRWAAH-----TFEYLRPIHWIVALYGNEVIEE----IGVLDVKAGR 182 Query: 188 ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 + GHRF +++ + Y + L E V+++ + R+ + LA+ + D+ Sbjct: 183 TSRGHRFLGKEA-TIENPESYEKALAEQFVIVNQDERKALVRKQIEELAADNNWIIPIDE 241 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 DLLEE+ ++E+ F G+FD+KYL +PE ++ ++K +Q+ FV +E L F+ V Sbjct: 242 DLLEEVSSILEYPTAFAGTFDEKYLVVPEPVLVTSMKEHQRYFVVYNQEKQLLPFFVSVR 301 Query: 308 NIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQ 367 N + +GN +V+ ARLEDAL F++ D L P+ Sbjct: 302 NGN-DYMIENVAKGNQKVLTARLEDALFFYEED--------------------LKIPMTT 340 Query: 368 RMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDRAIVLSKADLCT 424 + +L+ L+ FHAKIG+ E++ R+++L +IA+ ++ + RA + K DL T Sbjct: 341 FLKKLETLN--FHAKIGSMTEKMDRVQLLVGRIAKELNLPSDVVVTAQRAASIYKFDLVT 398 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 +V EFPELQG +G+ YA+ Q E AI EH P +P++ +++ADKLD Sbjct: 399 NMVGEFPELQGIMGEIYALKQGETPEVAQAIREHYMPTSADGELPSSVPGALLAVADKLD 458 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------------- 530 T ++F A P+GS DPYALRR +G+++I+ +I + F + Sbjct: 459 TFLSFTAAGMLPTGSNDPYALRRQVMGLVQILAAFDWNIEIEDFTKLLLGLDYAEFLSGK 518 Query: 531 ----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ ++ F +R+ + RHD+I+AI+ ++ + K L+ S + Sbjct: 519 EEEVEEFILSFIRERVAQRIATITKRHDIIDAIVNSHTSSVPEQLKAAKVLSAVSESEEF 578 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + + R+ I A K + S EI L E+E+ L I + + +Q + Sbjct: 579 KGITEALNRVINISA---KAQDDASGEILEDRLETESERTLVKAIKELHSKVQTLTPEEL 635 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ I FF++ +V VDD R NRL L + IIL + + ++ Sbjct: 636 YSH----LEAMAPKINDFFNENMVMVDDEATRRNRLRFLGLLSEIILDLADFTSLI 687 >gi|21905215|gb|AAM80078.1| putative glycyl-tRNA synthetase beta subunit [Streptococcus pyogenes MGAS315] Length = 650 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 196/698 (28%), Positives = 333/698 (47%), Gaps = 76/698 (10%) Query: 29 LIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKA 81 + L E + +++++ + TP RL + + GL+ + E+ GP G KA Sbjct: 1 MATFLTENRLSFEDIQTFSTPRRLAVRVSGLAAQQTDLTEDFKGPAKKIALDADGNFSKA 60 Query: 82 IDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLKTIVPVAIQKVPWPKS 140 GF+R GL T + I+ KG+ Y+ V + + ++VL V + + +P S Sbjct: 61 AQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLLG-VTEVLSAMTFPVS 116 Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 M W+ +F +IRP+ ++ +L ++ ++LD +I G ++ GHRF Sbjct: 117 MHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHSGRVSRGHRFLGTET- 165 Query: 201 KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWV 260 + S D Y DL V+ D + R+ I+ + +A G+++ D DLL E++ LVE+ Sbjct: 166 TITSADSYEADLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDIDADLLNEVLNLVEFP 225 Query: 261 QVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQ 320 FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L F+ V N +++ Sbjct: 226 TAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGHLMPNFVSVRNGN-DQAIENVIK 284 Query: 321 GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFH 380 GN +V+ ARLED FW+ DQ + +A+L +V FH Sbjct: 285 GNEKVLVARLEDGEFFWREDQKL--------------------QIADLVAKL--TNVTFH 322 Query: 381 AKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 KIG+ E + R RV+ +A L +V VDRA + K DL T +V EF ELQG + Sbjct: 323 EKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLLTGMVGEFDELQGIM 382 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G++YA L E+ + AI EH P +P K+ ++LADKLDTL++F+++ PS Sbjct: 383 GEKYARLAGEDAAVATAIREHYLPDAAGGALPETKVGAVLALADKLDTLLSFFSVGLIPS 442 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLILFFHDRLK 543 GS DPYALRRAT GI+RI+ IP+ + ++ +++ F R+ Sbjct: 443 GSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTYANKADVMNFIRARVD 502 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 + + + D+ EA+L + ++ + L + + + + S R F + Sbjct: 503 KMM-GKAVPKDIREAVLESSTFVVPEMLAAAEALVKASHTENYKPAVESLSRAFNLAEKA 561 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + S+ + P E E L+A I + + + + I Sbjct: 562 -----DASVHVDPSLFENEQENTLFAAIQGLTLAGSAAQQ-------LEQVFVLSPVIND 609 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD +V +D+ +++NRL++L + + + ++ Sbjct: 610 FFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 647 >gi|187477217|ref|YP_785241.1| glycyl-tRNA synthetase beta chain [Bordetella avium 197N] gi|115421803|emb|CAJ48314.1| glycyl-tRNA synthetase beta chain [Bordetella avium 197N] Length = 711 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 186/728 (25%), Positives = 330/728 (45%), Gaps = 74/728 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + ++ E + + L+ G++ + Y TP RL ++L + +P++ E+ Sbjct: 18 PPKALNRLGESFAEGVRATLQSLGLLADGCQVTAYATPRRLAVHLSAVLAQAPDQAYAEK 77 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + GL+ + ++++ K D +A P + Sbjct: 78 LMPAKIGLTEDGKATPALAKKLAAKGLEHLDPATLERESDGKQDYLIARGTAPGAQLAAG 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI +P PK MR+ S ++RP ++ + A+ I+ + + + Sbjct: 138 LQEGLEKAIDGLPIPKVMRYQLADGQTS-VKFVRPAHRLVALHGAD-----IVPVSVLGL 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 G T GHRF + + + D Y L +A V+ E RR I + A + L Sbjct: 192 EAGRATLGHRFMSEGDVLIAQADAYEATLAQAQVVASFEKRRAEIESQLLAEAGKLAGTL 251 Query: 244 VEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GVL 299 +D LL+E+ LVE V++G F++++L +P+E + LT++ NQK F ++ G L Sbjct: 252 GDDPAVAALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKYFPLFDQQTGKL 311 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 + F++VSN++ ++ I++GN RVV RL DA F++ D+ Sbjct: 312 THRFLIVSNMRTANPV-NIIEGNQRVVRPRLADAQFFFETDRKV---------------- 354 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 PL R+ L ++V+H K+GTQ ERV R+R + + +AQ + +VA DRA +L+K Sbjct: 355 ----PLAARVEPLG--NIVYHNKLGTQLERVERVRAIARGVAQALGGNVAASDRAALLAK 408 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL + +V EFPELQG +G YA E +A+ + R ++T+ L Sbjct: 409 ADLSSNMVGEFPELQGIMGAYYAAGDGEPAEVVEALRSQYRNRYDSPVTADTLTAVTLFL 468 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIR------------------------- 514 A++ +TL WAI P+G +DP+ LRRA LG+I Sbjct: 469 AERAETLTGIWAIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKISEDGPLSLNGLL 528 Query: 515 IILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 + E + F ++R + L R + ++A++ + L + + + Sbjct: 529 TLAEASFPAGKVPASTLPEVRAFIYERYRNQLIGEHDR-NAVDAVIALDP-PLHQVAERV 586 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + + F + + KRI +L E + E + P L AE +L + I Sbjct: 587 RAVTAFGQMPEAASLAAANKRIGNLLKKAEGEIGE----VDPARLTDAAEIKLASAIEQL 642 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 G + + + L EP++ FF V+V +D +R NRL+LL+ + ++ Sbjct: 643 GPQAEAQLAAGDFAANLRTLAQAREPVDAFFADVMVMAEDPALRANRLALLKQLHGLMNQ 702 Query: 695 VINVQKIV 702 V ++ ++ Sbjct: 703 VADISRLA 710 >gi|298230969|ref|ZP_06964650.1| glycyl-tRNA synthetase subunit beta [Streptococcus pneumoniae str. Canada MDR_19F] Length = 646 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 192/695 (27%), Positives = 321/695 (46%), Gaps = 77/695 (11%) Query: 32 LLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKAIDG 84 LKE + ++ ++ + TP RL + + GLS + E+ GP G KA G Sbjct: 1 FLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGPAKKIALDSDGNFTKAAQG 60 Query: 85 FLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRW 143 F+R GL I+ KG+ Y+ V ++ + +E ++ +V ++ + +P SM W Sbjct: 61 FVRGKGLTVED---IEFREIKGEEYVYVTKEEVGQSVEAIVPGVV-DVLKSLTFPVSMHW 116 Query: 144 STTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQ 203 + +F +IRP+ ++ +L E+ DLD +I ++ GHRF K+Q Sbjct: 117 AGN-----SFEYIRPVHTLTVLL-----DEQEFDLDFLDIKGSRVSRGHRFLGKET-KIQ 165 Query: 204 SLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVF 263 S Y DL + V+ DP R I++ + + G+ + D DLL E++ LVE+ F Sbjct: 166 SALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVHIEIDADLLNEVLNLVEYPTAF 225 Query: 264 MGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNS 323 MGSFD KYL +PEE++ ++K +Q+ FV R ++G L FI V N A + +++GN Sbjct: 226 MGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISVRNGNA-ERLKNVIKGNE 284 Query: 324 RVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKI 383 +V+ ARLED FW+ DQ + + + +L+ +V FH KI Sbjct: 285 KVLVARLEDGEFFWREDQKLV--------------------ISDLVEKLN--NVTFHEKI 322 Query: 384 GTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLCTEIVREFPELQGKIGKE 440 G+ E + R + +A+ V + RA + K DL T +V EF ELQG +G++ Sbjct: 323 GSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLLTGMVGEFDELQGIMGEK 382 Query: 441 YAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSK 500 Y +L E + AI EH P +P +K+ +++ADKLDT+++F+++ PSGS Sbjct: 383 YTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKLDTILSFFSVGLIPSGSN 442 Query: 501 DPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLILFFHDRLKLYL 546 DPYALRRAT G++RI+ I + + I+ ++ F R+ + Sbjct: 443 DPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYENKAEVMDFIKARVDKMM 502 Query: 547 HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKK 606 D+ EA+L N + +++ L E + + S R F + E Sbjct: 503 GS--TPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPSVESLSRAFNLAEKAEGV 560 Query: 607 NREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD 666 + + EK L + + Q L ++ I+ FF+ Sbjct: 561 -----ATVDSALFENDQEKALAEAVETL-------VLSGPASQQLKQLFALSPVIDAFFE 608 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +V +D+ VR NRL++L + +I Sbjct: 609 NTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQI 643 >gi|21244927|ref|NP_644509.1| glycyl-tRNA synthetase subunit beta [Xanthomonas axonopodis pv. citri str. 306] gi|21110642|gb|AAM39045.1| glycyl-tRNA synthetase beta chain [Xanthomonas axonopodis pv. citri str. 306] Length = 745 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 199/781 (25%), Positives = 335/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ L ++ L++ G+ + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQALFDGVLSGLEKRGIAVARGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDARGQPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 +I +L + IT GHRF + + + Y+ L A VL+DP+ RR I Sbjct: 172 ---GTAVIPAELLGVRGDRITRGHRFMHEGAVSLAAPGDYVDALRAAHVLVDPDARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 +++ A G D LE+++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VDEVQAAARQAGGSARIGDDNLEQVVNLVEWPAAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NIQ+ D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDDGGTLTEQFIGIANIQSKD-VAEVAKGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEIIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 LQARRAAALAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEIALAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLIDL 505 Query: 529 IEDQNLI------------------------------------------------LFFHD 540 ++ + F D Sbjct: 506 LKKAVSLVNSALASSQAGKQQTAAEAAKAQGVNVAERQSGGLWVPNVEATSEEIFDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAILR--------------------PENDNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ +L I + F Sbjct: 566 RLRGYYADKGVPATHFNAVAALFSVTSEAVPTPTSVGAHPGATPGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + + + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEADALAAANKRIRNILR---KVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN DD ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNADDPQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|157163964|ref|YP_001467077.1| glycyl-tRNA synthetase subunit beta [Campylobacter concisus 13826] gi|112800407|gb|EAT97751.1| glycyl-tRNA synthetase, beta subunit [Campylobacter concisus 13826] Length = 672 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 196/725 (27%), Positives = 360/725 (49%), Gaps = 79/725 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + LLEI EE+PA + +++ +L++ + + Y+TP RL + + Sbjct: 1 MKELLLEIGVEELPAIPFLRELPNINAKWQAVLEKYNIK-SEFKFYYTPRRLVFFHEKFP 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 P+ + +G GA KA F G+ S+ + K+ K +V Sbjct: 60 LAQPDSVASFVGAPKQVALKDGAFTKAALSFANKCGIS-ESELKFKEIDGK-EVLYYEKE 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++ +V ++ + + KSMRW F +IRP++S LC+L ++ Sbjct: 118 VKGEPVAKIMGDMVEEFLKSLSFGKSMRWGNGE-----FEFIRPIRSFLCLL-----GDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + + N TY HR + IK+ ++ Y + ++L+ + R IL++ + Sbjct: 168 VIKFNKFGVESSNSTYPHRSISYDMIKISNIKEYFEGSKSRGIVLEADEREKIILDEFEK 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ++ GL++ DKDLL E++ + E+ +GSF++++L +P E+I ++K NQ+ F Sbjct: 228 ISQKSGLKIEIDKDLLAEVVAITEYPTALLGSFEEEFLEVPSEVIITSMKENQRYFPVF- 286 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 ++G LAN F++VSN D + I++GN +V+ ARL DA+ FW+ D + LK Sbjct: 287 KDGKLANGFVVVSNAITKDY-SLIIKGNEKVLRARLSDAMFFWQSDLAHEFGPEKLK--- 342 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA----QLIDADV-- 408 ++ + ++G+ E+ R + KK+A +L+ + Sbjct: 343 ---------------------NITYLKELGSIYEKELRELKVAKKLASNYGELLKKEAGE 381 Query: 409 --ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A ++RA++LSKADL T++V EF ELQG +G YA +NE+ + AI+E P G Sbjct: 382 YEAKLERAVMLSKADLTTQMVYEFTELQGVMGAYYAKAKNEDENVVLAIKEQYLPDGEEA 441 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 P+ S V+L++KLDTL+ ++I + PSG+KDPYALRRA G+I+I+L + + + Sbjct: 442 QCPSKVFSSVVALSNKLDTLMGLFSIGKIPSGTKDPYALRRAANGVIKIVLAHSLKFDVK 501 Query: 527 QFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + +ED + LI F DRL + D +++A ++ ++L + +I+ Sbjct: 502 EILEDIAKEYKKFDVEVLINFILDRLYTFF---DANASIVKACIKSGEKDILELTKMIEA 558 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L + S + + KR+ I+ ++ ++ ++AEK L Sbjct: 559 LAKISSEPNFRENFSTFKRLANIIKDDKFS------MVNESLFEIDAEKALNDAFKAVDK 612 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + Y L ++ I+ FFD+V++NV++ +VR+NR++++ I + IL V Sbjct: 613 SLA-------YEPRLKALFALKPQIDEFFDKVMINVENEKVRNNRVAIIGQIYSEILKVA 665 Query: 697 NVQKI 701 ++++I Sbjct: 666 DIKEI 670 >gi|325919827|ref|ZP_08181819.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] gi|325549693|gb|EGD20555.1| glycyl-tRNA synthetase beta chain [Xanthomonas gardneri ATCC 19865] Length = 745 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 197/781 (25%), Positives = 335/781 (42%), Gaps = 118/781 (15%) Query: 1 MPD---FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLY 55 M + L+E+ +EE+P + A+ ++ L++ GV + + TP RL + Sbjct: 1 MSEQLPLLIELGTEELPVKALPGLAQAFFDGVLHGLEKRGVAVTRGDAKPLSTPRRLAVL 60 Query: 56 LKGLSPHSPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDV 108 L G++ PE+ E LGP G KA+ GF G+ + + KG+ Sbjct: 61 LPGVATEQPEQRSEVLGPYLNIALDAEGKPTKALAGFAAKAGIDWTALE--RTSDAKGER 118 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 ++ P D+L I+ AI +P PK MRW +++ RP++ ++ + Sbjct: 119 FVHRAVTPGARTADLLPEILREAIAAMPIPKPMRWGAHE-----YAFARPVQWLVLLF-- 171 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 + +I +L + +T GHRF + + + Y+ L A VL+D + RR I Sbjct: 172 ---GDAVIPAELLGVRGDRLTRGHRFMHQGEVSLAAPGDYVEALRAAHVLVDADARRARI 228 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A G +D L++++ LVEW + SF++ +L +P+E + T++ NQK Sbjct: 229 VEEVEAAAKQAGGSARISEDNLQQVVNLVEWPSAVLCSFERDFLAVPQEALIETMEINQK 288 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L FI ++NI + D A + +G RV+ R DA F+ D Sbjct: 289 FFPVLDAGGKLTEQFIGIANIVSKD-VAEVAKGYERVIRPRFADAKFFFDED-------- 339 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 L + L+ A L V + AK+GT ++V+R+ L + IA + AD Sbjct: 340 ------------LKQGLEAMGAGL--ASVTYQAKLGTVADKVARVAALAEVIAPQVGADP 385 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 RA L+K DL + +V EFPELQG G+ YA E AI+E +PR +++ Sbjct: 386 VQARRAAELAKNDLQSRMVNEFPELQGIAGRHYAKAAGEPSEISLAIDEAYQPRFAGDDI 445 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 + + +++A++LDTL +A KP+G+KDP+ALRR LG+ R ++E+ D+ L Sbjct: 446 ALSPLGKVLAIAERLDTLAGGFAAGLKPTGNKDPFALRRNALGLARTVIESGFDLSLLDL 505 Query: 529 IEDQNLI------------------------------------------------LFFHD 540 I+ + F D Sbjct: 506 IKKAVGLVSSALASSQASKQQTAAEAAKTQGVNVAQRQSGGLWVPNVEATAAEIFDFILD 565 Query: 541 RLKLYLHDRDIRHDLIEAI--------------------LRPENDNLLTIVDLIKHLNEF 580 RL+ Y D+ + A+ L + +L I + F Sbjct: 566 RLRGYYADKGLPATHFNAVAALFSVAPEGAPTALGVGAHLGATHGSLYDFDRRIDAIGIF 625 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + E + KRI IL K EI +I L AE+ L + + Sbjct: 626 ATLPEAEALAAANKRIRNILR---KVEGEIPGDIDTSLLREPAEEALAEAVEAAIGDTGD 682 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 ++ Y + L + ++ FFD V+VN +D ++R NRL+LL+ + + + V ++ Sbjct: 683 ALHRHDYVAVLARLARLRPQVDAFFDGVMVNAEDAQLRANRLALLKKLGDRLGSVAAIEH 742 Query: 701 I 701 + Sbjct: 743 L 743 >gi|86150989|ref|ZP_01069205.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315124694|ref|YP_004066698.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842159|gb|EAQ59405.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|315018416|gb|ADT66509.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 664 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 184/718 (25%), Positives = 333/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ ++ K+ K +V Sbjct: 60 EKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGIS-ENELTFKEIKGK-EVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW +F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMIEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + EAE +LY QE Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFAQEAESKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|323127883|gb|ADX25180.1| glycyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 679 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 204/713 (28%), Positives = 344/713 (48%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + ++N++ + TP RL + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFENIQIFSTPRRLAARVIGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDTDGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L E +I Sbjct: 132 G-VAEVLTAMTFPVSMHWAKN-----SFEYIRPVHTLTVLLDDEALDLD-----FLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGKET-TITSADSYEDDLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L FI Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +V+GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIDNVVKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L + A VDRA + K DL Sbjct: 339 ADLVAKL--ANVTFHEKIGSLTEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAEGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + + D+ EA+L + ++ + L +++ E Sbjct: 517 ANKADVMSFIRARVDKMM-GKAVPKDIREAVLESSTFVVPEMLAAAEAL---VNASHKEN 572 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + + EK + S+ + P + E+ L+A I ++ S +++ Sbjct: 573 YKPAVESLSRAFNLAEKAD--ASVRVDPSLFENDHEQALFAAIQSLS--LEGSTENQ--- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V DD+ +++NRL+LL + + ++ Sbjct: 626 --VEQVFALSPVINDFFDNTMVMADDQAIKNNRLALLAALVGKAKSIAAFNQL 676 >gi|251783139|ref|YP_002997442.1| glycyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391769|dbj|BAH82228.1| glycyl-tRNA synthetase beta chain [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 679 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 203/713 (28%), Positives = 344/713 (48%), Gaps = 76/713 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L L L E + ++N++ + TP RL + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGERLATFLTENRLSFENIQTFSTPRRLAARVIGLADQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 G KA GF+R GL T + I+ KG+ Y+ V + + ++VL Sbjct: 75 AKKIALDTDGNFSKAAQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLL 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 V + + +P SM W+ +F +IRP+ ++ +L E +I Sbjct: 132 G-VAEVLTAMTFPVSMHWAKN-----SFEYIRPVHTLTVLLDDEALDLD-----FLDIHS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF + S D Y DL V+ D + R+ I+ + +A G+++ Sbjct: 181 GRVSRGHRFLGKET-TITSADSYEDDLRSQFVIADAKERQEMIVEQIKAIEAAQGVQVDI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R +EG L FI Sbjct: 240 DADLLNEVLNLVEFPTAFMGSFDAKYLDVPEEVLVTSMKNHQRYFVVRDQEGRLMPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGN-DQAIDNVIKGNEKVLVARLEDGEFFWREDQKL--------------------QI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADL 422 +A+L +V FH KIG+ E + R RV+ +A L + A VDRA + K DL Sbjct: 339 ADLVAKL--ANVTFHEKIGSLTEHMDRTRVIAASLAKEANLSAEEEAAVDRAAQIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLSGEDAAVATAIREHYLPDAAEGALPETKVGAVLALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + ++ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +++ F R+ + + + D+ EA+L + ++ + L +++ E Sbjct: 517 ANKADVMSFIRARVDKMM-GKAVPKDIREAVLESSTFVVPEMLAAAEAL---VNASHKEN 572 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + + EK + S+ + P + E+ L+A I ++ S +++ Sbjct: 573 YKPAVESLSRAFNLAEKAD--ASVRVDPSLFENDHEQALFAAIQSLS--LEGSAENQ--- 625 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + ++ I FFD +V DD+ +++NRL+LL + + ++ Sbjct: 626 --VEQVFALSPEINDFFDNTMVMADDQAIKNNRLALLAALVGKAKSIAAFNQL 676 >gi|145640587|ref|ZP_01796170.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae R3021] gi|145274513|gb|EDK14376.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.4-21] Length = 541 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 172/575 (29%), Positives = 278/575 (48%), Gaps = 53/575 (9%) Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 MRW+ +IRP+ ++ +L +++I+ ++ + GHRF Sbjct: 1 MRWADK-----TVQFIRPVHTVTMLL-----GDELIEGEILGVASARTIRGHRFLGEKEF 50 Query: 201 KVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEW 259 ++Q D Y + L E+ V+ D R+ IL + A+A+G ++ LLEE+ LVE+ Sbjct: 51 EIQHADQYPQLLREKGSVVADFNERKAEILAKSQAKATALGGVADIEESLLEEVTSLVEY 110 Query: 260 VQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIV 319 V F++++L +P E + T+K +QK F ++G L FI VSNI D A I+ Sbjct: 111 PNVLAAKFEERFLAVPAEALVYTMKGDQKYFPIYDKDGKLLPHFIFVSNINPEDPTA-II 169 Query: 320 QGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVF 379 +GN +VV RL DA F+K D L + L R+ RL+ V+F Sbjct: 170 EGNEKVVRPRLTDAEFFFKTD--------------------LKQKLVDRLLRLET--VLF 207 Query: 380 HAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGK 439 ++GT ++ RI L +IA+ I AD A RA +LSK DL T +V EF + QG +G Sbjct: 208 QQQLGTLKDKTDRIEQLAGEIAKQIGADEAKAKRAGLLSKCDLMTNMVFEFTDTQGVMGM 267 Query: 440 EYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGS 499 YA E+ A+ E PR + +P + ++ V+LADK DTL + I + P GS Sbjct: 268 HYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVASAVALADKFDTLTGIFGIGQAPKGS 327 Query: 500 KDPYALRRATLGIIRIILENKIDIPLSQFIED---------------QNLILFFHDRLKL 544 DP+ALRRA LG +RII+E + + L ++ +++ F R + Sbjct: 328 ADPFALRRAALGALRIIVEKNLPLDLEDLVKKSAALFGDKLTNQNVVADVVDFMLGRFRA 387 Query: 545 YLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE 604 + D I D+I+A+L ++ ++ F + E + KR+ ILA Sbjct: 388 WYQDEGIAVDVIQAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKAG 447 Query: 605 KKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIF 664 EI+L + AEK L + T +Q + Y + D L ++ P++ F Sbjct: 448 AAIGEINLTA----CVEPAEKALAEAVLALRTEVQPLIAQGDYTTVLDKLANLRAPVDNF 503 Query: 665 FDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 FD V+VN +D +R NRL++L ++ + L V ++ Sbjct: 504 FDNVMVNAEDPALRQNRLAILNTLQGLFLQVADIS 538 >gi|154173823|ref|YP_001408091.1| glycyl-tRNA synthetase subunit beta [Campylobacter curvus 525.92] gi|112803116|gb|EAU00460.1| glycyl-tRNA synthetase, beta subunit [Campylobacter curvus 525.92] Length = 673 Score = 634 bits (1636), Expect = e-179, Method: Composition-based stats. Identities = 187/725 (25%), Positives = 339/725 (46%), Gaps = 81/725 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 D L+EI EE+PA + ++ +L E + + Y+TP RL + + + Sbjct: 3 KDILIEIGVEELPAIPFLRELPNIEAKWRAVLAEYKLE-SEFKFYYTPRRLVFFHENFAL 61 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + P+ + E +G GA +A F + G+ S+ + K+ K +V + Sbjct: 62 NQPDSVAEFIGAPKQVAIKDGAFTQAALSFAKKCGID-ESELKFKEIGGK-EVLYYERQL 119 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++ + + + KSMRW + F +IRP++S LC+ E + Sbjct: 120 KGEASVKLFGDMIEKFLLSLNFGKSMRWGSGE-----FEFIRPIRSFLCLFGGE-----V 169 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + + GN TY HR + V S D Y + ++LD RR+ IL L Sbjct: 170 VKFNKFGVESGNGTYPHRSISYDKSLVNSADEYFSGMRARGIVLDASERRSIILAQFKEL 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G+++ D+DLL+E++ + E+ +G F+ ++L +P E+I ++K NQ+ F + Sbjct: 230 EKG-GIDIQIDEDLLDEVVAITEYPTALLGEFEAEFLEVPSEVIITSMKENQRYFPVF-K 287 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L+N F++VSN A D GA IV+GN +V+ ARL DA+ FW+ D + LK Sbjct: 288 NGKLSNHFVVVSNALAKD-GALIVKGNEKVLRARLSDAMFFWRSDLKAEFSPDKLK---- 342 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV------- 408 ++ + ++G+ ++ R + ++A L + ++ Sbjct: 343 --------------------NITYLKELGSLYDKELREAKIADELANLYENELKDEVGAG 382 Query: 409 --ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 A ++RA++L+KADL T++V EF ELQG +G YA + E AI E P Sbjct: 383 FRAKLNRAVMLAKADLTTQMVYEFTELQGVMGAYYARAKGEEDVIVTAIREQYLPDSEDA 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 P++ S V+LA+KLDTLI +++ + PSG+KDP+ALRRA G+I+I+L + + +S Sbjct: 443 PCPSSVFSSVVALANKLDTLIGLFSVGKIPSGTKDPFALRRAANGVIKIVLAHGLKFDIS 502 Query: 527 QFIEDQNLIL----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 ++ + F DRL + D +++A + + ++L + ++ Sbjct: 503 SVLKSLSAQYKSFDLGLLENFILDRLYTFF---DTNPSIVKACINSDKRDILQLTKAVEA 559 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 ++E S ++ + KR+ I+ + + L E+ L Sbjct: 560 MSEISSKPNFKELFSTFKRLANIIKDVDV------GTVDENLLQTSEERALNEGFKALK- 612 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 D + + L + I+ FFD+V++NVDD +R NR++++ I L + Sbjct: 613 ------DSPDHKACLNELFGLKGEIDAFFDKVMINVDDENIRKNRIAVIGQIYKSFLEIA 666 Query: 697 NVQKI 701 ++++I Sbjct: 667 DIKEI 671 >gi|227500713|ref|ZP_03930762.1| glycine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227217171|gb|EEI82520.1| glycine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 688 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 204/731 (27%), Positives = 349/731 (47%), Gaps = 74/731 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ + L L++E + + + TP R ++L ++ Sbjct: 2 MSNYLLEIGVEEIPSDYVKNTKKQLEDKFKKLIEENKLTCEEVLVESTPRRFAIFLNNVN 61 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EK GP V G K + GFL+ G + ++ K D Sbjct: 62 ADTEEKTISVKGPSVKIAYDEGGQANKPLLGFLKGQGADIADV--VIREFKGEDYIFIEK 119 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + + +VLK V ++ + +P+SMRW+ + W RP++ + +L + Sbjct: 120 KEKSKSVAEVLKENVYDLVKSISFPRSMRWAGK-----SIRWARPIRWFVSLL-----DD 169 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++ D + I NI+ GHR I + +++Y + L+E V+L + R++ IL + Sbjct: 170 EVLTFDAEGIKVSNISKGHRSLGSAEIVIDKIENYEKLLKENYVILRYKDRKDIILKGLN 229 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 RLAS VG E ++D+ LL+E+I +VE+ V +G DKKYL LP+E++ +K +Q+ F Sbjct: 230 RLASEVGGEYMKDESLLDEVINIVEYPTVLIGDIDKKYLELPKEVVTTPMKDHQRYFPVL 289 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 L F++V N + +++GN +V+ ARLEDA F++ Sbjct: 290 DENKNLLPYFLVVRNGD-EEFKENVIEGNKKVLVARLEDAKFFYE--------------- 333 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI--AQLIDADVAL- 410 LD+ KPLD + L+ + F +G + R+ L ++ A I D+ Sbjct: 334 -----LDIKKPLDSYVDELN--SLTFFEGLGNMKLKTDRLTDLTERYRQALAIGEDMTHP 386 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 + RA L+KADL T++V EF ELQG +G+ YA E AIEE PR +N+P Sbjct: 387 IGRAAYLAKADLVTKMVVEFTELQGTMGRIYAKKSGEEERIATAIEEAYMPRSAGDNLPK 446 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-- 528 I +S+ADK+DT++ +AI + +GS+DP+ LRRA LGII I L N IDI L + Sbjct: 447 TITGIILSIADKMDTIVGLYAIEKYVTGSQDPFGLRRACLGIINIFLANSIDIDLKRLVN 506 Query: 529 -----------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 ++ FF DRLK L D +D + A++ N+L I Sbjct: 507 DALLVYTEKNELAFDYDTAMAKVLDFFRDRLKNKLIDDGYNYDTVNAVMNVSELNILRIA 566 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L++F E + RI + + N I L + E+ Y V+ Sbjct: 567 KKVASLDKFL--EDNEDQISYFTRIVNLSKDLDDDN------IREDLLENDLERSFYEVL 618 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 G + ++ Y + + + + D+ ++NVD+ ++++NR++++ + Sbjct: 619 ISLGDFV--AVAETDYLAELEKIKETSQIGNEYLDKTMINVDNEQLKNNRIAMINILAKR 676 Query: 692 ILIVINVQKIV 702 I + +V++IV Sbjct: 677 IKQIFDVKEIV 687 >gi|209542755|ref|YP_002274984.1| glycyl-tRNA synthetase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|209530432|gb|ACI50369.1| glycyl-tRNA synthetase, beta subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 686 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 230/707 (32%), Positives = 344/707 (48%), Gaps = 53/707 (7%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDL ++ L + ++ R + P R+ L L L P G Sbjct: 13 IPARMQARAAEDLVRLVTDAL--APLNPRDARGFSGPRRIALTLT-LDGVVPGTTVAERG 69 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PR GA +KA+ GF R G+ + ++ P + +P + Sbjct: 70 PREGAPEKALAGFTRKHGVTPADLVL------EDGFWVLNRTVPPVEAATRIAEALPPLL 123 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE--IPCGNITY 190 ++ PWPKSMRW S F+W+RPL+ ILC+L E + D + + +T Sbjct: 124 RRFPWPKSMRWGEG----SGFTWVRPLRRILCLLDGETVAFSLADGEDDGHGLRADRLTE 179 Query: 191 GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 GHRF AP V + L VL+D RR I RLA+ GL +V D L+ Sbjct: 180 GHRFTAPGAFAVTDAAAWRDGLRARQVLVDAAERRALIEEGTTRLAAEEGLRIVPDPGLV 239 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ GL EW F+G D+ ++ LP E+++++++ NQ+ F +G A F V+N+ Sbjct: 240 DEVAGLTEWPVPFLGRIDETFMDLPREVMQVSMRVNQRYFALINDDGSAAPRFAFVANLL 299 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 DGGA + GN RV+ AR DA HFW D+ ++ L R+ Sbjct: 300 PEDGGALTIAGNERVLRARFADARHFWDLDR--------------------ARTLASRVG 339 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 LD + FHA +G+QG RV RI L +A ++ AD A +RA +L+KADL T +V EF Sbjct: 340 ALDA--ITFHAALGSQGARVQRIVRLAGLLAPMVGADPAQAERAALLAKADLTTGMVGEF 397 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G YA E AI EH PRG + VP +SI V+LADK+D+L F+ Sbjct: 398 PELQGVMGAYYARHDGEADPVATAIAEHYMPRGQNDGVPAAPVSIAVALADKIDSLAAFF 457 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------- 536 A EKP GS DPYALRRA LG+IRII EN + + L + L Sbjct: 458 AAGEKPGGSGDPYALRRAALGVIRIIRENALRLDLVKLFVLAAEALPETLRDAPDLALLP 517 Query: 537 -FFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 F +RL++ L RHD++ AI D ++ ++ L ++ G+ L + + Sbjct: 518 GFVAERLRVQLRAEGARHDILAAISSGNEDSDITRLLARTDALAAMLATDDGQNLLAATR 577 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 R IL IE++K+ P E+ L + D ++ ++ +R+ Sbjct: 578 RAANILRIEDRKDGPHDGAPDPTLYEQPEERELANALLDVIPAVETTIAAERFEDAMRDA 637 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V VN D ++R NRL LL ++ + +++ + +I Sbjct: 638 ARLRPVLDRFFDAVTVNADRADLRANRLRLLAELRRMTVLIADFSQI 684 >gi|162148115|ref|YP_001602576.1| glycyl-tRNA synthetase beta chain (glycine--tRNA ligas beta chain) (glyrs) [Gluconacetobacter diazotrophicus PAl 5] gi|161786692|emb|CAP56275.1| glycyl-trna synthetase beta chain (glycine--trna ligas beta chain) (glyrs) [Gluconacetobacter diazotrophicus PAl 5] Length = 684 Score = 633 bits (1634), Expect = e-179, Method: Composition-based stats. Identities = 230/707 (32%), Positives = 344/707 (48%), Gaps = 53/707 (7%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDL ++ L + ++ R + P R+ L L L P G Sbjct: 13 IPARMQARAAEDLVRLVTDAL--APLNPRDARGFSGPRRIALTLT-LDGVVPGTTVAERG 69 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PR GA +KA+ GF R G+ + ++ P + +P + Sbjct: 70 PREGAPEKALAGFTRKHGVTPADLVL------EDGFWVLNRTVPPVEAATRIAEALPPLL 123 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE--IPCGNITY 190 ++ PWPKSMRW S F+W+RPL+ ILC+L E + D + + +T Sbjct: 124 RRFPWPKSMRWGEG----SGFTWVRPLRRILCLLDGETVAFSLADGEDDGHGLRADRLTE 179 Query: 191 GHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 GHRF AP V + L VL+D RR I RLA+ GL +V D L+ Sbjct: 180 GHRFTAPGAFAVTDAAAWRDGLRARQVLVDAAERRALIEEGTTRLAAEEGLRIVPDPGLV 239 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 +E+ GL EW F+G D+ ++ LP E+++++++ NQ+ F +G A F V+N+ Sbjct: 240 DEVAGLTEWPVPFLGRIDETFMDLPREVMQVSMRVNQRYFALINDDGSAAPRFAFVANLL 299 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 DGGA + GN RV+ AR DA HFW D+ ++ L R+ Sbjct: 300 PEDGGALTIAGNERVLRARFADARHFWDLDR--------------------ARTLASRVG 339 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 LD + FHA +G+QG RV RI L +A ++ AD A +RA +L+KADL T +V EF Sbjct: 340 ALDA--ITFHAALGSQGARVQRIVRLAGLLAPMVGADPAQAERAALLAKADLTTGMVGEF 397 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 PELQG +G YA E AI EH PRG + VP +SI V+LADK+D+L F+ Sbjct: 398 PELQGVMGAYYARHDGEADPVATAIAEHYMPRGQNDGVPAAPVSIAVALADKIDSLAAFF 457 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------- 536 A EKP GS DPYALRRA LG+IRII EN + + L + L Sbjct: 458 AAGEKPGGSGDPYALRRAALGVIRIIRENALRLDLVKLFVLAAEALPETLRDAPDLALLP 517 Query: 537 -FFHDRLKLYLHDRDIRHDLIEAILRPEND-NLLTIVDLIKHLNEFFSSAKGEKFLLSAK 594 F +RL++ L RHD++ AI D ++ ++ L ++ G+ L + + Sbjct: 518 GFVAERLRVQLRAEGARHDILAAISSGNEDSDITRLLARTDALAAMLATDDGQNLLAATR 577 Query: 595 RIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLL 654 R IL IE++K+ P E+ L + D ++ ++ +R+ Sbjct: 578 RAANILRIEDRKDGPHDGAPDPTLYEQPEERELANALLDVIPAVETTIAAERFEDAMRDA 637 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ FFD V VN D ++R NRL LL ++ + +++ + +I Sbjct: 638 ARLRPVLDRFFDAVTVNADRADLRANRLRLLAELRRMTVLIADFSQI 684 >gi|308234593|ref|ZP_07665330.1| glycyl-tRNA synthetase, beta subunit [Atopobium vaginae DSM 15829] gi|328944350|ref|ZP_08241814.1| glycyl-tRNA synthetase beta subunit [Atopobium vaginae DSM 15829] gi|327491269|gb|EGF23044.1| glycyl-tRNA synthetase beta subunit [Atopobium vaginae DSM 15829] Length = 698 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 199/739 (26%), Positives = 339/739 (45%), Gaps = 81/739 (10%) Query: 1 MP---DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLK 57 M +FLLEI +EE+P+ A + L ++ L++ G+ + ++ + +P RL + + Sbjct: 1 MSKSCEFLLEIGTEEMPSAPLIHATKQLVQLMQAHLQKSGLTFGSVEAHQSPRRLAVLVH 60 Query: 58 GLSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYL 110 L+ +PE E + GP KA GF + G+ + + K V Sbjct: 61 DLAAQTPEINEIKRGPAASIAFDANKQPTKAALGFAKKCGVDAHDLIEKTAEDGKNYV-F 119 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVA 168 A R +++L + + + WP +S RW+ S++RP++ ++ +L Sbjct: 120 AQKFIAARTAQELLGDMCHDIVASLEWPNYRSQRWA-----FETESFVRPVRWLVALL-- 172 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E++I + T GHR + +Y L +A VLL+ + RR I Sbjct: 173 ---DEEVIPFSYAGVSSSCTTQGHRVLGHGSHTIDCPGNYRSILRDAGVLLE-DERRQKI 228 Query: 229 LNDAHRLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 L++ L + K EE+I L E+ +V +GSFD+++L +P E+I ++ TNQ Sbjct: 229 LDEVAAFEHTHPQLHVDMPKKTFEEVINLCEYPRVLIGSFDQEFLDVPHEIICESMLTNQ 288 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F T++G L F++VSN AS AI+ GN RVV ARL+DA F++ D Sbjct: 289 RYFPIYTKDGELTRDFVIVSNGAAS-ADKAIIDGNERVVRARLDDAKFFFEED------- 340 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 L PLD+ + RL VVF K+G+ ++ +R+ L A+L+ AD Sbjct: 341 -------------LKHPLDEYVPRLS--KVVFQEKLGSVLDKTNRMTKLILVCAELLKAD 385 Query: 408 VALV---DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 L +RA L+KADL T V EF QG +G YA E+ C AI +H +PR Sbjct: 386 DELTKLCERAAYLAKADLVTNAVVEFTSQQGVMGGYYARAMGEDPRVCKAIAQHYRPRFS 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL------- 517 + P + + V+L DKLDT+ +AINE P+GS DP+A RR+ LGII I+ Sbjct: 446 KDVTPDDFVGKLVALVDKLDTICGMFAINEPPTGSSDPFAQRRSALGIIAILQELPSCSL 505 Query: 518 ------------ENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEND 565 E +D + + FF RL+ ++ + + I AI Sbjct: 506 KSLIDAALNLFKEQGLDFDVPAVSAC--VCEFFSVRLQALAKEQSVSAESISAIAAIGII 563 Query: 566 NLLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 + ++ + + E ++ R + + + +++ L A Sbjct: 564 DPREFFARVQAFDSARTREPQLFEDLAIAFARASHLT------DASLGTDVNVSIL-TPA 616 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E++L+ S+ ++++++ + Y + L + EPI+ FF+ V + DD E+R+NR Sbjct: 617 EQQLFTACSNGRDNVEKALSNGEYARALASLAELREPIDQFFNDVRIMDDDTEIRNNRFR 676 Query: 684 LLQYIKNIILIVINVQKIV 702 LL ++ V ++ + Sbjct: 677 LLNTFTSVFSKVADIAALT 695 >gi|332524722|ref|ZP_08400920.1| glycyl-tRNA synthetase subunit beta [Rubrivivax benzoatilyticus JA2] gi|332108029|gb|EGJ09253.1| glycyl-tRNA synthetase subunit beta [Rubrivivax benzoatilyticus JA2] Length = 704 Score = 633 bits (1633), Expect = e-179, Method: Composition-based stats. Identities = 185/738 (25%), Positives = 341/738 (46%), Gaps = 76/738 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLL--KEEGVIYQNMRQYWTPHRLFLYLKGL 59 + L+E++ EE+P + K E + +L L ++ + Y +P RL + + + Sbjct: 5 KNLLVELFVEELPPKALKKLGEAFAAVLADGLRAQQLAAADAAVTAYASPRRLAVQVAAV 64 Query: 60 SPHSPEK-IEERLGP------RVGAGKKAIDGFLR--STGLQTISDCQIKKDPKKGDVYL 110 + +P++ + +L P G+ A+ L G + ++ + + + K +YL Sbjct: 65 AAKAPDQAVSTKLMPVAVALSSDGSASPALLKKLAALGHGAEVVAQLKRQGEGKNEALYL 124 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + +P + + L+ + A+ K+P PK M++ ++ ++RP ++ + Sbjct: 125 DSV-QPGATLAEGLQKALADAVAKLPIPKVMKYQLADG-WTSVDFVRPAHGLIAL----- 177 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHP-IKVQSLDHYIRDLE-EAMVLLDPECRRNAI 228 +++ + + + G T GHRF A P ++++ D Y L E V+ RR I Sbjct: 178 HGSQVVPVGVLGLQAGRTTRGHRFEAAAPTVEIRDADSYAAQLRDEGAVIASFAERRAEI 237 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 + + A+ GL+ ++D LL+E+ LVE V + F+ ++L +P+E + LT+K NQK Sbjct: 238 VRQLNEAAANEGLKPIDDDALLDEVTALVERPNVLLARFEPEFLAVPQECLILTMKANQK 297 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F +G L F++VSNI+ +D + +V GN RVV RL DA F+ +D+ Sbjct: 298 YFPLLDAQGRLTERFLVVSNIRPADA-SRVVGGNERVVRPRLADAKFFFDQDRK------ 350 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 K L+ R+ L VV+H K+G+QGERV R+R + + I + + Sbjct: 351 --------------KTLESRIPAL--AKVVYHGKLGSQGERVERVRTIARHIGEQLGGSA 394 Query: 409 ALVDRAIVLSKADLC--------TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 T++V EFPELQG +G YA E + A+E+H + Sbjct: 395 LAAQADRA------ALLAKADLLTDMVGEFPELQGVMGGYYARHDGETEAVALAVEDHYR 448 Query: 461 PRGPLENVPTNKISIT---VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 PR + +P + V+LADKL+TL + I + P+G KDP+ALRR LG+IR+++ Sbjct: 449 PRFAGDALPRTDAGLAGITVALADKLETLAGLFGIGQLPTGDKDPFALRRHALGVIRMLV 508 Query: 518 ENKIDIPLSQF-------------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 E + + + + ++ F +RL +L ++ ++A++ Sbjct: 509 EKALPLSVPELVSAAFRAFPEGHGQAQAEVLRFLDERLVGWLREQGYSAHEVDAVVALRT 568 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + + + + F + + + KR+ IL +K + + P L+ AE Sbjct: 569 ERWAELPQRLAAVRAFAALPEAPALAAANKRVGNIL---KKSDEAAGGAVEPARLVEPAE 625 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + E+ Y L ++ P++ FFD V+VN DD +R NRL+L Sbjct: 626 AALFDALGRVAPQADEAFARADYTASLQALAALKAPVDAFFDAVMVNADDPALRRNRLAL 685 Query: 685 LQYIKNIILIVINVQKIV 702 L + + V ++ ++ Sbjct: 686 LGTLHAAMNRVADLSRLA 703 >gi|114570728|ref|YP_757408.1| glycine--tRNA ligase [Maricaulis maris MCS10] gi|114341190|gb|ABI66470.1| glycyl-tRNA synthetase beta chain [Maricaulis maris MCS10] Length = 738 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 263/767 (34%), Positives = 384/767 (50%), Gaps = 97/767 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L EI+ EEIPARMQ +A DL +L LK G+ + ++R + RL L + GL Sbjct: 1 MSELLFEIFCEEIPARMQPRAEADLEKLLGDRLKAAGLAWTSLRTFAGARRLGLVIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + + EER GPRVGA KA++GFLR G+ ++ C+ + D KKG+ ++A + KP R Sbjct: 61 VKTADVSEERKGPRVGAPDKAVEGFLRGAGVASLDQCEKRAD-KKGEFWVARIEKPGRAS 119 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +V+ +P ++ PWPKSM++ A W+RP++ +LC+ ++ +++ Sbjct: 120 AEVIAESIPDMMKAFPWPKSMKFGEGEK---AQRWVRPIQRLLCVFDGN-----VVPVEV 171 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAV 239 I N+T GHR P V + Y LE E VLLD R + ILN A ++ Sbjct: 172 FGITASNVTEGHRRMGRGPFTVSNFLEYATVLEGEGHVLLDRAARESLILNGARKVCVDA 231 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGV 298 G ELVED LL E+ GLVEW +G D +L LP E+I LT+KT+QK F R + G Sbjct: 232 GFELVEDAGLLTEVAGLVEWPVPVLGEMDPDFLDLPPEVITLTMKTHQKYFAVRDPKTGE 291 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F+ ++N A DGG AI GN+RV++ARL DA HFW D+ Sbjct: 292 LVSKFVTIANQVAPDGGVAIAAGNARVLSARLSDARHFWDNDRK---------------- 335 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 PL A+L V FH K+GT ++V R+ L +++A ++ AD L RA L+ Sbjct: 336 ----TPLSDMAAQLS--KVTFHEKLGTVADKVERVAALAEELADVVGADKKLARRAAELA 389 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL +E+V EFPELQG +G+ YA+ Q E+ + DAI++H KP+GP + VPT +S V+ Sbjct: 390 KADLVSEMVYEFPELQGAMGRYYALDQREDAAVADAIKDHYKPQGPSDEVPTAPVSAAVA 449 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADKLDTL+ FWAI+EKP+GSKDP+ALRRA LG+IRI+LE +PL + I + +L Sbjct: 450 LADKLDTLVGFWAIDEKPTGSKDPFALRRAALGVIRILLEAGTRVPLLEQILEHVRVLAL 509 Query: 539 HD--------RLKLYLHDRDIRH------DLIEAIL------------------RPENDN 566 D R + D+ L R D Sbjct: 510 RDIRDALEVSREMGLVLGAKYAARWVPIEDVTIGALELGLENYSAPGARTRETSRLGADL 569 Query: 567 LLTIVDLIK-----------HLNEFFSSAKGEKFLLSAK-RIFQILAIEEKKNREISLEI 614 L D +K ++ F+ + ++ K R Q E ++ Sbjct: 570 LSFFADRLKVHLRDEGTRHDVIDAVFALGDDDLVRVTHKARALQAFLDTEDGAALLAGNK 629 Query: 615 SPQYLLLEAEKR---------LYAVISDFGTHI-----------QESMDHKRYHQIGDLL 654 +L ++E L + ++++ + + L Sbjct: 630 RASNILAKSEGDLTGEADAGYLAGAPESAERDLIAALNTAGPAAEKALADEDFAAAMRAL 689 Query: 655 HSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + PI+ FF+QV VN DD +R NRL LL I+ I V + KI Sbjct: 690 SQLRAPIDAFFEQVTVNTDDAALRRNRLLLLSAIRTAIRAVADFDKI 736 >gi|256826493|ref|YP_003150452.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Cryptobacterium curtum DSM 15641] gi|256582636|gb|ACU93770.1| glycyl-tRNA synthetase, tetrameric type, beta subunit [Cryptobacterium curtum DSM 15641] Length = 694 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 186/731 (25%), Positives = 312/731 (42%), Gaps = 71/731 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M EI EEIPA A + L + + + + + + +P RL + GL Sbjct: 4 MHTLAFEIGVEEIPAFDLDSATKQLERLAPAAFEGARIPFDRIEVFSSPRRLIVMAYGLP 63 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E +E+ GP G KA GF R GL ++ K + AV Sbjct: 64 EATEELMEKYKGPAARIAFDEAGQPTKAAIGFARGKGLTPDDLE--RRLVKDVEYVFAVK 121 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + P + +L I+ I+ + WP+S RW+ ++RP++ I+ + + Sbjct: 122 QIPAVPVISLLPAILQGFIEDIKWPRSQRWAAYREV-----FVRPVRWIVALF-----DD 171 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++I L + G T+GHR AP +V I+ + A V+ R I +D Sbjct: 172 QVIPLQFAGVSTGRDTWGHRVLAPGAHRVNEATDLIKVVRAASVVPSQSEREQIIRDDVA 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 + L L E++ L E+ Q +FD+ +L +P+E+I + +Q+ F Sbjct: 232 AIEHTYDLVADLPAKTLLEVVNLSEFPQPLAATFDESFLQVPQEIIIDAMLMHQRYFPLY 291 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 ++G L N F++VSN + I+ GN RVV ARL+DA F++ D Sbjct: 292 DKKGALTNRFVIVSNGNPA-CQETIISGNERVVRARLDDAKFFYEED------------- 337 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVAL 410 L +PL+ + +L VVF +GT ++ R+ +A +L AD Sbjct: 338 -------LKQPLESYVEKLS--SVVFQEDLGTVLDKTKRLVRQATHLAADAKLSKADARD 388 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 ++RA L KADL T V EF +QG +G YA+ E AI +H +PR + P Sbjct: 389 LERACYLCKADLVTNTVVEFTSVQGVMGGYYALASGETEQVAQAISQHYRPRFASDTAPD 448 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII-----------LEN 519 + + V+ ADKLDT+ A+ + P+GS DP+ALRR+ +GII ++ ++ Sbjct: 449 SVVGQFVAFADKLDTVCGLIAVGQAPTGSSDPFALRRSAIGIIGMLDAGLPVSLLPAIDC 508 Query: 520 KID------IPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +D I ++ + + FF R K+ L D + D + A+L I Sbjct: 509 ALDALMADGISFNRTTAREAISDFFIARTKVILRDEGLPIDAVNAVLAAGVTEPALIAAR 568 Query: 574 IKHLNEFFSS--AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + L +S + R + ++ + + E L A I Sbjct: 569 TRALAAARASSPETMTDLATAFARADNL------RDASLGSKTDTSLF-TPEEADLQAAI 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 I + ++ Y + + L S+ PI+ FF+ V+V D+ +R+NRL LL + Sbjct: 622 DAVTAAIPDLLNQGDYVRALEKLASLRAPIDTFFEAVMVMDKDQTLRENRLRLLNRFVST 681 Query: 692 ILIVINVQKIV 702 V + ++ Sbjct: 682 FKDVADFGELA 692 >gi|86157732|ref|YP_464517.1| glycyl-tRNA synthetase subunit beta [Anaeromyxobacter dehalogenans 2CP-C] gi|123736895|sp|Q2IQJ5|SYGB_ANADE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|85774243|gb|ABC81080.1| glycyl-tRNA synthetase beta chain [Anaeromyxobacter dehalogenans 2CP-C] Length = 701 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 200/729 (27%), Positives = 339/729 (46%), Gaps = 67/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A L L L + + + +R TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPGALRQLEDDLAKALADARLAHGEVRAVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G A GF RS G++ + ++ KG+ Sbjct: 61 PKQTDARTEAFGPPVAQAYDAEGKPTPAATGFARSQGVEVSA--LVRAQTPKGERVAVTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R E VL ++ + + + K+MR S ++ RP++ ++ +L Sbjct: 119 VEKGRKAEQVLPALLERLVAGLRFRKAMR-----SRFDEVTFARPVRWMVALLGGRP--- 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQ-SLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + E+ G +TYGHRF AP I ++ + D Y+ L A VL DPE RR A+L + Sbjct: 171 --LKVRHGEVASGKVTYGHRFLAPKAIALKGTPDDYLAKLRRAHVLADPEERRAALLAEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R G ++ +D L+E+++ LVE +G F++ L LP E++ ++ +Q+ F Sbjct: 229 ARAGKEAGGKVRDDPALVEQVLYLVEEPSAVVGEFERSNLELPPEVVISEMRNHQRYFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS + D A G RV+ ARL DA F++ D+ Sbjct: 289 VDGKGRLKNRFVAVSATRVKDPAVA-RHGYERVLRARLADARFFFEEDRK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L +R+ L F AK+G++ +R RI + +A+ + D + D Sbjct: 338 ----------RKLHERIEDLGRR--TFQAKLGSELDRAQRIGAVASGLARALGKDALVAD 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A L+K DL T +V EFPELQG +G YA L+ DAIE+H KP G E +P Sbjct: 386 LLEASRLAKVDLNTGMVGEFPELQGTMGAHYARLEGLKPEIADAIEDHYKPIGAAEEMPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V++AD+L +L+ + EK +G+ DP+ LRRA +GI+RI++ + L+ +E Sbjct: 446 SDLGALVAVADRLHSLVGIIGVGEKATGAADPFGLRRAAIGILRIVIARGYHLSLATAVE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F R++ +R DL+EA+L +D+++ Sbjct: 506 QTLDALAGVKLAAGRALVAEQVLDFLRGRVRAAWTER-FDADLVEAVLAAGSDDVVDARR 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L E + ++ KR+ I +EK + + P L AE+ L A + Sbjct: 565 RLEALAEAKARPDFGSLAVAFKRVANI---QEKAGGPGAAAVDPALLRDPAEQDLLAALE 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + ++ + FFD VLV +D +R NRL L++ + + Sbjct: 622 KVEQEVGARRAARDYPAVLRTVATLEPAVARFFDDVLVMAEDPALRANRLGLMRRVGALF 681 Query: 693 LIVINVQKI 701 + + +KI Sbjct: 682 SDLADFRKI 690 >gi|67459738|ref|YP_247362.1| glycyl-tRNA synthetase subunit beta [Rickettsia felis URRWXCal2] gi|75535872|sp|Q4UJU2|SYGB_RICFE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|67005271|gb|AAY62197.1| Glycyl-tRNA synthetase beta chain [Rickettsia felis URRWXCal2] Length = 664 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 222/702 (31%), Positives = 344/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ LY L + K E G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQAFAGPRRITLYATHLPKVTLPKETEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIDAPEAAINGFCKAHNVSKLELST--KLINNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E ++ L + NI YGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----VLPLQFGHLTANNIAYGH 179 Query: 193 RF--HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLL 250 R+ ++V + Y L E V+L+ R I LA++ L + ED L+ Sbjct: 180 RYRLTDNKKLEVTDFEDYKNKLSENHVILERTKREEIIKTGLLELANSRNLNIKEDNRLI 239 Query: 251 EEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQ 310 EE+ GL E+ V +G +K+L LP+E++ +++T+QK F +EG A F+ VSN + Sbjct: 240 EEVAGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKEGNFAQYFLFVSNGR 299 Query: 311 ASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMA 370 ++ +++GN +V++ARL DAL+F+K+D +K L+ R+ Sbjct: 300 FANA-ELVIKGNEKVLSARLSDALYFYKQDI--------------------AKTLESRLG 338 Query: 371 RLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREF 430 +L+ V FHAK+G E+V R+ + A D + A L K+DL +E+V EF Sbjct: 339 KLEA--VTFHAKLGNLREKVERVAKICSYTAL----DNTDLITAAKLCKSDLVSEMVGEF 392 Query: 431 PELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFW 490 P+LQG +G YA + AI++H KP+G +NVP + ++LADK+D+L+ Sbjct: 393 PDLQGIMGYYYAKHEGLGEEVAAAIKDHYKPQGLSDNVPGGN-AALLALADKVDSLVGLM 451 Query: 491 AINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-----------FFH 539 E P+GS DPYALRR LGIIRIILENK+++ L+ I + FF Sbjct: 452 IAGEAPTGSGDPYALRRQALGIIRIILENKLELNLNDLIIFSLKLYGNSADKDLITSFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFKN-DYDIALINAALDL---NLVDTKFKLDSLKEFLVEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + ++I+ + + EK L+ V+ + S+ K Y++ +LL + Sbjct: 568 I-----DGQKITGLVDASLFSTQPEKELFEVMQKISPQVTSSISDKDYNKALNLLSFLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ +NRLSLL I + V ++ Sbjct: 623 PITSFFDNVLVNDPDPKIAENRLSLLHNICELFDKVAKFCRL 664 >gi|312864172|ref|ZP_07724406.1| glycine--tRNA ligase, beta subunit [Streptococcus vestibularis F0396] gi|322517253|ref|ZP_08070132.1| glycyl-tRNA synthetase beta subunit [Streptococcus vestibularis ATCC 49124] gi|311100173|gb|EFQ58382.1| glycine--tRNA ligase, beta subunit [Streptococcus vestibularis F0396] gi|322124159|gb|EFX95693.1| glycyl-tRNA synthetase beta subunit [Streptococcus vestibularis ATCC 49124] Length = 678 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 202/700 (28%), Positives = 340/700 (48%), Gaps = 77/700 (11%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L + Y++++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDNNRLSYESIQTFSTPRRLAVRVIGLADQQSDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLK 125 KA GF+R GL I+ KG+ Y+ V + + ++VL Sbjct: 75 SKKIALDAEGNFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKPAKEVLA 131 Query: 126 TIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPC 185 VP + + +P SM W+ F +IRP+ +++ +L ++ ++LD +I Sbjct: 132 G-VPEVLSSLTFPVSMHWANN-----TFEYIRPVHTLVVLL-----GDEALNLDFLDIKS 180 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 G ++ GHRF H +++ + D Y DL V+ D + R N I + S G+++ Sbjct: 181 GRVSRGHRFLG-HEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIESEQGVQVQI 239 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 ++ LL E++ LVE+ FMGSFD KYL +PEE++ +++T+Q+ FV R +G L FI Sbjct: 240 EEGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFIS 299 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V N A + +++GN +V+ ARLED FW+ DQ + Sbjct: 300 VRNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KI 338 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADL 422 + +A+L +V FH KIG+ E ++R V+ +A+ + A V RA + K DL Sbjct: 339 EDLVAKL--ANVTFHEKIGSLSEHMARAGVIAASLAEQAGLTAEERAAVARAAEIYKFDL 396 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T +V EF ELQG +G++YA+L E+ + AI EH P +P K+ ++LADK Sbjct: 397 LTGMVGEFDELQGIMGEKYALLAGEDAAVATAIREHYLPDSADGALPETKVGAILALADK 456 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------ 530 LDTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + I+ Sbjct: 457 LDTLLSFFSVGLIPSGSNDPYALRRATQGIVRILDAFGWHIPMDELIDSLYALSFDSLSY 516 Query: 531 --DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEK 588 +I F R+ + D+ EA+L N + D+++ + ++AK + Sbjct: 517 DNQAEVINFIKARVDKMMG--RTSKDIKEAVLAGSN---FVVADMLEVADALSAAAKADG 571 Query: 589 FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 + + + + + + EK + S+ + EK L I + + S K Sbjct: 572 YKAAVESLSRAFNLAEKADD--SVAVDASLFENNQEKVLSKAIEEL--ELTGSASDK--- 624 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 L ++ I+ FFD +V +D V++NRL+LL + Sbjct: 625 --LAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLSSL 662 >gi|121609122|ref|YP_996929.1| glycine--tRNA ligase [Verminephrobacter eiseniae EF01-2] gi|121553762|gb|ABM57911.1| Glycine--tRNA ligase [Verminephrobacter eiseniae EF01-2] Length = 718 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 197/734 (26%), Positives = 338/734 (46%), Gaps = 77/734 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + K E + +L L G+ + Y +P RL ++ ++ +P++ ++++ Sbjct: 16 PPKALQKLGEAFAAVLGEQLLALGLASTASVVTPYASPRRLAAHVSAVAERAPDRAVQQK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-----PKKGDVYLAVLRKPKRL 119 L P G A+ L++ G KG P Sbjct: 76 LMPVAVGLDAAGQPSPALLKKLQALGADICDPAAAVAALRRAQDGKGQALFYDRIVPGAT 135 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHS----PISAFSWIRPLKSILCILVAEDAKEKI 175 + L+ + AI K+P PK M + S+ +++RP + ++ + + Sbjct: 136 LAAGLQQALDEAIAKLPIPKVMSYQLETDCALPGWSSVNFVRPAQGLVAL-----HGSTV 190 Query: 176 IDLDLKEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAH 233 + + + GN T GHRF A P+ + D Y L + V+ RR I + Sbjct: 191 VPVKALGLTAGNCTQGHRFEAVVSPVLLSDADGYAATLRSDGAVIASFAERRAEIAHQLA 250 Query: 234 RLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A+++G + ++ED+ LL+E+ GLVE +V + F+ ++L +P+E + LT+K +QK F Sbjct: 251 AAAASLGRAVRVIEDQALLDEVTGLVERPRVLVCEFESRFLDIPQECLILTMKAHQKYFP 310 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 G L + F++VSNI D ++ GN RVV RL DA F+ +D+ Sbjct: 311 LLDAAGRLTHQFLVVSNISPEDPH-WVIDGNQRVVRPRLADAQFFFDQDRR--------- 360 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA-- 409 KPL R+ L VV+H ++GTQ ERV R+R + IA+ + A Sbjct: 361 -----------KPLAARVDAL--CKVVYHHQLGTQAERVQRVRAIAALIARTMAETTAGP 407 Query: 410 --------LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 D+A +L+KADL T +V EFPELQG +G+ YA+ DAIE+H KP Sbjct: 408 WADAALAQQADQAALLAKADLVTGMVGEFPELQGTMGRYYALNDGLGEVIADAIEDHYKP 467 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 R +++P N++ + ++LADKL+TL+ + P+G +DP+ALRR LG+IR+++E ++ Sbjct: 468 RFAGDSLPRNRVGVVLALADKLETLVGMFGTGNLPTGERDPFALRRHALGLIRMLVEKEV 527 Query: 522 DIPLSQFIEDQ-------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLL 568 + L + L F ++RL L ++ ++A+L L Sbjct: 528 PLELHALLAGAWSVFGDKIGQDLSALTDFIYERLAGSLREQGYGAREVDAVLAQRPQRLA 587 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 + + + F + + + KR+ IL + + ++P L +AE+ LY Sbjct: 588 LVEKRLAAVRAFAALPESPALAAANKRVANILKKADAVDPH----VNPGLLREQAEQDLY 643 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 A + F D Y L + P++ FFD VLVNV+ ++R NRL LL+ + Sbjct: 644 AALQRFVPEADAQFDAGDYSLSLQTLAVLRAPVDAFFDDVLVNVEQMDLRLNRLGLLKSL 703 Query: 689 KNIILIVINVQKIV 702 + V ++ ++ Sbjct: 704 HQAMNRVADLSRLA 717 >gi|15620457|gb|AAL03854.1| glycyl-tRNA synthetase beta chain [Rickettsia conorii str. Malish 7] Length = 674 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 227/702 (32%), Positives = 346/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 23 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 81 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 82 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 139 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 140 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 189 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LAS+ L + ED L+EE Sbjct: 190 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELASSHELIIKEDNRLVEE 249 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 250 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 309 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D +K L+ R+ +L Sbjct: 310 NA-ELVIQGNEKVLSARLSDALYFCKQDI--------------------AKTLESRLGQL 348 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 349 EA--VTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 402 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +N+P+ ++LADKLD+L+ Sbjct: 403 LQGIMGYYYAKHEGLNAEIAAAIRDHYKPQGLSDNLPSGNA-ALLALADKLDSLVGLMIA 461 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I + FF Sbjct: 462 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 521 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR I Sbjct: 522 ERAKFYFKN-DYDIALINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 577 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 578 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 632 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 633 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 674 >gi|268680124|ref|YP_003304555.1| glycyl-tRNA synthetase subunit beta [Sulfurospirillum deleyianum DSM 6946] gi|268618155|gb|ACZ12520.1| glycyl-tRNA synthetase, beta subunit [Sulfurospirillum deleyianum DSM 6946] Length = 683 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 190/728 (26%), Positives = 327/728 (44%), Gaps = 79/728 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K + + +L++ + Y+TP RL L+ + Sbjct: 5 LLIEIGVEELPAIPFLKELPTIEKQWLDILEKNALACA-FEFYYTPRRLVLWHESFPTEQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 EK EE G + GA A GF + G++ KD K +V Sbjct: 64 GEKEEEFFGAPLSVALKDGAPTPAALGFAKKCGVEFSEIATAMKDGK--EVLYYKRTIAP 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + + +LK ++ I+ + + KSMRW S+IRP++ C+L ++ + Sbjct: 122 QSSKPLLKEMIEQFIKGLNFGKSMRWGFLEE-----SFIRPIRWFGCML-----GDEHVP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L + +Y HR + P Y L E V+L P R ILN + + Sbjct: 172 FSLFGVESTPFSYPHRTISYEPFAYMFAGDYFERLAERGVVLYPSKREEIILNAFKAIEA 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ + D +LL E++ + E+ +GSF++++L LP E+I ++K NQ+ F +EG Sbjct: 232 KEGVSIEIDAELLAEVVAITEYPTALIGSFEERFLRLPPEVIITSMKENQRYFPVF-KEG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN + D IV+GN +V+ ARL DA+ F D LK Sbjct: 291 KLTNRFIVVSNAISDDY-DLIVKGNEKVLRARLSDAIFFLDNDLKKGLCYEGLK------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--------- 408 D+ + +G+ ++ R + + ++ + Sbjct: 344 ------------------DITYLDGLGSLMDKTKREKAIALYLSAQYQERLLAEHSRLNP 385 Query: 409 ----ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 AL++++++ +K+DL +E+V EF ELQG +G YA E+ A++E P Sbjct: 386 QSLNALMEKSVLYAKSDLLSEMVYEFTELQGLMGYYYAKEAGEDELFALALKEQYLPNSE 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +P+ S V+LA KLD+LI ++IN+ P+G+KDPYALRRA GI++I+LE I Sbjct: 446 ESALPSTLFSAIVALAYKLDSLIALFSINKIPTGNKDPYALRRAVNGIVKIVLEQGIAFD 505 Query: 525 LS----------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 +S + + L FF +R+ + D+ +I A++ +++ + I Sbjct: 506 ISKDLKALAQGYKAFDFALLESFFLERMYQFF---DVNPSIISAVISSGERDIVRLSLKI 562 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L ++ + KR+ I+ + + +L I+ E L+ S Sbjct: 563 QALATMVQDDGFKEMFSTFKRVANII---KNMDMNQTLSINQALFENAYETALFDAFSAV 619 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 ES + D L ++ I+ FFD V+VNV++ E+R NR +L+ I Sbjct: 620 NAKNYESFEAH-----LDALFALKPHIDAFFDNVMVNVENPELRANRQNLIGSIYTAFKS 674 Query: 695 VINVQKIV 702 + ++++I Sbjct: 675 IADIKEIT 682 >gi|161723838|ref|NP_360953.2| glycyl-tRNA synthetase subunit beta [Rickettsia conorii str. Malish 7] gi|125987862|sp|Q92G11|SYGB_RICCN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 664 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 227/702 (32%), Positives = 346/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LAS+ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELASSHELIIKEDNRLVEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 240 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D +K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFCKQDI--------------------AKTLESRLGQL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 EA--VTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +N+P+ ++LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNAEIAAAIRDHYKPQGLSDNLPSGNA-ALLALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I + FF Sbjct: 452 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFKN-DYDIALINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 664 >gi|153952476|ref|YP_001397675.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. doylei 269.97] gi|152939922|gb|ABS44663.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 664 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 182/718 (25%), Positives = 335/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELTNIEKKWKNILEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ + ++ K+ K +V Sbjct: 60 DKQEDSFTEFIGAPKNVAYKDGVLTPAGQSFLQKAEIS-ENELTFKEIKGK-EVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW +F +IR ++SI CIL +K Sbjct: 118 TKGLQSQEILGEMIEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDK 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLD+LI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDSLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 SHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I S ++ + EAE +LY + T + + Sbjct: 559 DNFNENFTTFKRLANIATKN-------SHKVDENLFVQEAESKLYKAFQE-KTKVNSLQE 610 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 611 K------LENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYVEFLKIADLKEL 662 >gi|257791137|ref|YP_003181743.1| glycyl-tRNA synthetase, beta subunit [Eggerthella lenta DSM 2243] gi|317488133|ref|ZP_07946708.1| glycyl-tRNA synthetase beta subunit [Eggerthella sp. 1_3_56FAA] gi|325832897|ref|ZP_08165570.1| glycine--tRNA ligase, beta subunit [Eggerthella sp. HGA1] gi|257475034|gb|ACV55354.1| glycyl-tRNA synthetase, beta subunit [Eggerthella lenta DSM 2243] gi|316912761|gb|EFV34295.1| glycyl-tRNA synthetase beta subunit [Eggerthella sp. 1_3_56FAA] gi|325485762|gb|EGC88226.1| glycine--tRNA ligase, beta subunit [Eggerthella sp. HGA1] Length = 696 Score = 631 bits (1629), Expect = e-178, Method: Composition-based stats. Identities = 202/731 (27%), Positives = 329/731 (45%), Gaps = 73/731 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 EI +EEIPA H+A L ++ L + + ++ Y TP RL + ++ Sbjct: 5 HTLAFEIGTEEIPAFDLHRATLQLEKLVPEALDAVRIPHGDVAVYTTPRRLIAIVADVAD 64 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E GP V G KA GF R G+ D +++ + A Sbjct: 65 ETEALEEVFRGPSVKIAFDADGNPTKAATGFARGKGVGV--DALERREENGVEYVFATKS 122 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 R + ++L ++ I WPKS RW TT + RP++ ++ +L E+ Sbjct: 123 IAARDVAELLPGVLEGVITGTSWPKSCRWGTTSEY-----FSRPVRWLVALL-----DER 172 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + + GN+T GHRF AP P +V + + +E A V+ + R I + Sbjct: 173 VIPVRFAGLTAGNLTRGHRFLAPGPHEVATAADLLGVVEAAHVVSSEQAREAVIREGVAQ 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 G + L E++ L E V +G+FD+++L +PEE+I + +Q+ F Sbjct: 233 AEQRTGARAELPEKTLLEVVNLCEQPTVLVGTFDEEFLRVPEEIIVDAMLMHQRYFPLYD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L N FI+VSN + I GN RVV ARL DA F++ D Sbjct: 293 ADGKLTNNFIVVSNGDPA-HADTITGGNERVVRARLSDAKFFYEED-------------- 337 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALV 411 L PL+ + RLD +VVF +GT E+ RI L K +A QL +AD A Sbjct: 338 ------LKHPLETYVDRLD--EVVFQETLGTMKEKADRIVALAKHLAADAQLSEADAADA 389 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 +RA L+KADL T V EF +QG +G YA E+ AI +H +PR + P + Sbjct: 390 ERAAYLAKADLVTNAVVEFTSVQGVMGSYYAAACGESDQVARAIADHYRPRFSGDEPPAS 449 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE- 530 + V++ADKLDT+ +A+ + P+GS DP+ALRR+ +GI+ ++ E + + L+ I+ Sbjct: 450 DVGRIVAMADKLDTVCGLFAVGQGPTGSSDPFALRRSAIGIVAML-EAGLPVSLAAAIDA 508 Query: 531 -----------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + FF R K+ L D HD ++A+L + I+ Sbjct: 509 ALGTYQDAGIDFDRDAIRAEVADFFVTRTKVMLRDGGCSHDTMDAVLATGVEEPAQIIAR 568 Query: 574 IKHLNE--FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L + + + R + ++ ++ +E+ L +AE+ L A Sbjct: 569 TYVLEAERLGAPEAFDDLATAYARANNL------RDADLGVEVDEALL-SDAERALLAAT 621 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++E++ + L ++ PI+ FF+ VL+ DD +R+NRL LL + Sbjct: 622 DEAAACVKEALAVDHFGAALAALAALRAPIDAFFEDVLIMDDDLALRENRLRLLNRFVAV 681 Query: 692 ILIVINVQKIV 702 V + K+ Sbjct: 682 FAHVADFGKMA 692 >gi|292572510|gb|ADE30425.1| Glycyl-tRNA synthetase beta chain [Rickettsia prowazekii Rp22] Length = 664 Score = 631 bits (1628), Expect = e-178, Method: Composition-based stats. Identities = 229/702 (32%), Positives = 346/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ + K EE G Sbjct: 13 IPAFMQKNAEEGYLKIFTKIFEENEI-FAKVQVFAGPRRITLHATHVPKVILPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + D K K Y V + +R +++L I+ AI Sbjct: 72 PSIEAPEIAINGFCKAHNVSKL-DLSTKLRNNK-LYYFFVKKTKQRETKEILPKIIIDAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ L + NITYGH Sbjct: 130 NKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R +++ ++Y L E V+L+ R I LA+A L + +D L+EE Sbjct: 180 RLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDVCLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V N + Sbjct: 240 VTGLSEFPVVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVINGRFV 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + I+QGN +V++ARL DAL+F+K D +K L+ R+ +L Sbjct: 300 N-TELIIQGNEKVLSARLADALYFYKNDI--------------------AKTLESRLDKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 V+FH K+G+ E+V RI + + IA D + A L K+DL +++V EFP+ Sbjct: 339 K--SVIFHTKLGSLKEKVDRITDICRYIAP----DNIDLIMAAKLCKSDLVSDMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + Sbjct: 393 LQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGN-ATLLALADKLDSLVGLIIV 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRII+ENK++I I + FF Sbjct: 452 GETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR+ I Sbjct: 512 ERAKFYFKN-DYDITLINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + N++I+ + + EK L+ VI I + +K Y + +LL S+ + Sbjct: 568 M-----GNQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLK 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNTCEVFDKVAKFCRL 664 >gi|152993287|ref|YP_001359008.1| glycyl-tRNA synthetase subunit beta [Sulfurovum sp. NBC37-1] gi|151425148|dbj|BAF72651.1| glycyl-tRNA synthetase, beta subunit [Sulfurovum sp. NBC37-1] Length = 682 Score = 631 bits (1628), Expect = e-178, Method: Composition-based stats. Identities = 191/723 (26%), Positives = 325/723 (44%), Gaps = 72/723 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA K ++ +LK + +TP RL L + Sbjct: 5 LLIEIGVEELPAIPLLKIVSNIERSWKDILKNYKLD-NEFEFIYTPRRLVLKHAAMPEKQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E +GP + G KA +GF R G+ + D +V + Sbjct: 64 EDQTIELMGPPIAAAIKDGVPTKAAEGFARKCGVPFEELG--RADNNGREVLYYKKEERG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L+ ++ I + + K MRW + +IRP++ + ++ I Sbjct: 122 AQTAALLQEMLEKWIASMSFGKMMRWGSRSD-----EFIRPIRWLQV-----RMGDESIP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++L + TY HR ++V ++D Y L+E VLL P+ R IL + L + Sbjct: 172 VELFGVQSDTKTYVHRMVNYDALEVPNIDAYEAILKEGAVLLYPKEREAVILAEFDALEA 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ + D+ LL E++ + E + +GSFD+ +L LP E+I ++K +Q+ F G Sbjct: 232 EHGILIERDRALLAEVVAITENPKALVGSFDELFLELPPEVIITSMKEHQRYFPVF-ENG 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 + N F++VSN D + ++ GN RV+ RL D L F+K D N + L++ Sbjct: 291 KITNKFVVVSNAYTDDY-SKVIAGNERVLKPRLADGLFFYKNDLRNGLSTDGLEK----- 344 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLG-KKIAQLID----------A 406 V F +G+ +++ R + + + +A +D A Sbjct: 345 -------------------VQFIDGLGSLADKIKREKSIAVRLLALYMDRLEAGTGKNSA 385 Query: 407 DVA-LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 ++ L+DRA+ L+KADL +E+V EF ELQG +G YA E+ +AI+E P G Sbjct: 386 ELERLMDRAVELAKADLMSEMVYEFTELQGLMGYYYAKALGEDPLVYNAIKEQYMPVGEG 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +PT+ S V+++ KLDTL +++ + P+GSKDP+ALRRA GI+RI+ +N I + Sbjct: 446 AELPTSLFSSIVAMSIKLDTLFGLFSVGKIPTGSKDPFALRRAVNGIVRIVTDNDITFNI 505 Query: 526 SQFIE--DQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLN 578 IE F D LK ++ +R D +I A+L ++ I + LN Sbjct: 506 DDIIELLKAEYAEFNTDELKDFIIERINKSLDANPSVIAAVLASGERDINEIAKKVAALN 565 Query: 579 EFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHI 638 E S+ ++ + KR+ I + + + L I EAE LY Sbjct: 566 EIVSADTFKEQFSTFKRVANI---SKDVDLDGDLSIDISLFKEEAEVALYTAYEKVIHQD 622 Query: 639 QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINV 698 Y + L + ++ +FD V+VN +D ++ NRL + I + ++ Sbjct: 623 FP-----DYKTRLEALFGLKRELDTYFDDVMVNTEDEALKTNRLHTIGSIYKTFRDIADI 677 Query: 699 QKI 701 ++I Sbjct: 678 KEI 680 >gi|116070688|ref|ZP_01467957.1| Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. BL107] gi|116066093|gb|EAU71850.1| Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. BL107] Length = 720 Score = 631 bits (1627), Expect = e-178, Method: Composition-based stats. Identities = 189/754 (25%), Positives = 319/754 (42%), Gaps = 94/754 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FLLEI +EE+PA +A + L ++ L E + + ++ + TP RL + + L H Sbjct: 4 TFLLEIGTEELPADFARQALDQLRDRVLHDLAEARLSHGSISIFGTPRRLVVSVPNLDDH 63 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ EER GP V G A GF + G+ Q +D KG A + Sbjct: 64 QPDLREERKGPPVAQAFKDGVPGPAAIGFAKRCGIDASQLEQ--RDTPKGPCVFATVLTA 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +L+ ++P I + + MRW T + RP++ ++ + + +I Sbjct: 122 GRDGVSLLRDLIPTWIDALQGRRFMRWGTGTQ-----RFSRPIRWLVAL-----HGDDVI 171 Query: 177 DLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 D+++ + + HR H P+ + S D Y++ L++A VL+D + R I Sbjct: 172 DVEMPGADPVVQSDRFSRSHRLHGDQPLCIASADQYVKTLQQAGVLVDRDERSRLIRASI 231 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A A E L EE++ LVE ++ G +++L LP E+I ++ +Q+ Sbjct: 232 DQGAEAANGEANCPDRLFEELVDLVEGPRILQGQIAEQFLHLPPEVISTVMQAHQRYVPL 291 Query: 293 -----------RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 T E VL F+LV+N A I++GN RV+ ARL DA F + D+ Sbjct: 292 QIPGLTPDPLRLTAEAVLRPEFLLVANGL-EQASALIIRGNERVLGARLADAEFFLEVDR 350 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA 401 R + V F IG+ +R RI L ++ Sbjct: 351 RQ----------------------ASATRRDALSRVTFAEGIGSLRDRCDRIERLTDQLL 388 Query: 402 QLIDADVALV---DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 + ++ RA L K DL +++V EFPELQG +G +Y + + E+ A+ EH Sbjct: 389 TDLGLSDSVATASRRAAHLCKHDLVSQMVGEFPELQGLMGGKYLLEEGESRDVALAVVEH 448 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 PRG +++P+ V+LA++ + L++ +A E+P+GS DPYALRRA G++ I+ Sbjct: 449 YLPRGAGDDLPSTDAGAVVALAERFELLLSIYAKGERPTGSSDPYALRRAGNGVLLILWN 508 Query: 519 NKIDIPLSQFIEDQNLI---LF-----------------FHDRLKLYLHDRDIRHDLIEA 558 + L+ F+ LF R+ L D DL++A Sbjct: 509 QGWKLDLNGFLAKAVEAWKELFPAFAVDTAQLVGDLSALLRQRITSQLEDDGYAADLVQA 568 Query: 559 ILRPEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 + + L + I+ L + +R ++ + + +S Sbjct: 569 VAGDTVSTTRLLWDPLDVRVRIQMLRGLRDQGRLTAVQAVVQRASRLAEKGDLPSGVLSS 628 Query: 613 E--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---Q 667 + P +E+ L+ + Y Q+ D+L +E FFD Sbjct: 629 SDVVDPALFESASEQGLFDATQ----RLNPLAASGAYQQLCDVLVESTPALEAFFDGDQS 684 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+V DD +R NRL+LL ++N + + I Sbjct: 685 VMVMADDPALRTNRLNLLGVLRNQAAVFAQFELI 718 >gi|283956628|ref|ZP_06374107.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283791877|gb|EFC30667.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 664 Score = 631 bits (1627), Expect = e-178, Method: Composition-based stats. Identities = 186/718 (25%), Positives = 332/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRMV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ ++ K+ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGIS-ENELAFKEIKGK-EVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L +V ++ + + KSMRW +F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQKILGEMVEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++D + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVDFQSYGVKSAKKTFIHRSVSYDLKDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLQPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 SHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + EAE +LY QE Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFTQEAESKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|283954794|ref|ZP_06372310.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 414] gi|283793634|gb|EFC32387.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 414] Length = 664 Score = 630 bits (1626), Expect = e-178, Method: Composition-based stats. Identities = 184/718 (25%), Positives = 333/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + Y+TP RL + K + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWKNVLEEYRLL-SDFNFYYTPRRLVFFHKNFA 59 Query: 61 PHSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G G A FL+ G+ ++ K+ K +V Sbjct: 60 NKQEDSFAEFIGAPKNVAYKNGNLTPAGQSFLQKAGIS-ENELTFKEIKGK-EVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L ++ ++ + + KSMRW +F +IR ++SI+CIL ++ Sbjct: 118 IKGLQSQEILGEMIDKFLKSLNFGKSMRWGAN-----SFEFIRAIRSIVCIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y + LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSAKKTFIHRNISYDLQDFNNAKEYFQLLEKNYIILDPLQRKERILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + + + ED++LL E++ + E+ +GSF++K+L +P E+I +++ NQ+ F Sbjct: 228 IENQENIRIGEDEELLAEVVAITEYPNALLGSFEEKFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 + L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D Sbjct: 288 -DKSLSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQND-------------- 331 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 L + + +++ +GT ++ R + + + Q+ D + Sbjct: 332 ----------LQSGLKPEKLAKMIYLEGLGTMQDKSLREIKIAEILCQIFHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++++L +N +L+ I + L + Sbjct: 502 SYYKSFDMQILKDFIFERLYTFYT---VNASFVKSVLSSKNTDLIHINQSVHALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + P E E +LY QE Sbjct: 559 DNFHENFTTFKRLANIANKTLHK-------VDPTLFAQEIENKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FFDQV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ADSLQEKLENLFALKPFIDEFFDQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|218960932|ref|YP_001740707.1| putative glycine tRNA synthetase, beta subunit [Candidatus Cloacamonas acidaminovorans] gi|167729589|emb|CAO80501.1| putative glycine tRNA synthetase, beta subunit [Candidatus Cloacamonas acidaminovorans] Length = 698 Score = 630 bits (1625), Expect = e-178, Method: Composition-based stats. Identities = 213/729 (29%), Positives = 334/729 (45%), Gaps = 71/729 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLE+ EE+P R A +S LK + + + TP R++L L H Sbjct: 6 FLLELGCEELPERQIEIACNGVSSSFGTFLKSNKLYCGSYKVSGTPRRIYLDALELDTHQ 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFL-RSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 ++ + GP V G A GFL RS ++ +KG K Sbjct: 66 EDEEILKTGPLVSVAYDEEGNLTPAGKGFLNRSQ---AKEAAIFIQETEKGKFLAVKYIK 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++LK+ +P I ++P+ K M WS + RPL+ L + + Sbjct: 123 KGLATVELLKSWIPEMIVQIPFEKKMAWSQL-----GLIFSRPLRWFLILW-----NNRP 172 Query: 176 IDLDLKEIPCGNITYGHRFHA-PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++LD IPCGNITYG+RF I + + Y+ L E V++D E RR I+ Sbjct: 173 LELDFGGIPCGNITYGNRFLGLEKSITINKAEDYLPKLLEQKVIVDIEERRKEIITQLAA 232 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + +++ED++L+E ++ LVE+ +G F++KYL LP+++I TI QK F + Sbjct: 233 IFPEDNFKVIEDRELVETVVNLVEYPTAVVGEFEEKYLSLPDKIIISTISQAQKYFAVQD 292 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N F+ +SN S I +GN +VV ARL DAL +W D Sbjct: 293 NQGKLSNKFVFISNGNPS-ASMIIRKGNEKVVKARLADALWYWNEDTKY----------- 340 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVALV 411 PL+ LD V+F AK+GT ++ RI L +A + + Sbjct: 341 ---------PLEHWTRHLD--KVIFQAKLGTMADKTKRIMQLVSALADELKITEEQKKKA 389 Query: 412 DRAIVLSKADLCTEIVRE--FPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 R L KADL T ++ E F +LQG IGK+YA+ E+ + I EH PRG + +P Sbjct: 390 IRCAELCKADLVTNMLGEKEFTKLQGYIGKQYAIASGEDREIAEGIFEHYLPRGSGDELP 449 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + V++ADK+DT+ I P+GS DP+ALRRA G+++II K D+ L F Sbjct: 450 STLCGAIVAIADKMDTVAGIIGIGMMPTGSGDPFALRRAANGVVQIISSRKWDLDLFSFA 509 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + ++ F R+ L I +D+IE+++ + +L + + Sbjct: 510 DRALELIGKQTELDKKAKKNLHSFLEQRITGLLKTNGIAYDVIESVMHIDKSHLHDLENR 569 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + LN ++ KR+ I+A + + + L+ E LY + Sbjct: 570 AQALNALKGKEDFIHLVIGFKRVANIIA-----ETQDFVPFNKDKLVEPEEINLYEALQT 624 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I ++ +K Y L + I+ FFD VLVN +D E+R+NR SLL+ +K L Sbjct: 625 LHQDIDSALQNKDYPLALQYLIKFGKVIDAFFDAVLVNCEDDELRNNRHSLLKEVKKEFL 684 Query: 694 IVINVQKIV 702 V ++ IV Sbjct: 685 RVADLSLIV 693 >gi|319943023|ref|ZP_08017306.1| glycyl-tRNA synthetase beta subunit [Lautropia mirabilis ATCC 51599] gi|319743565|gb|EFV95969.1| glycyl-tRNA synthetase beta subunit [Lautropia mirabilis ATCC 51599] Length = 737 Score = 630 bits (1625), Expect = e-178, Method: Composition-based stats. Identities = 206/749 (27%), Positives = 337/749 (44%), Gaps = 92/749 (12%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN---MRQYWTPHRLFLYLKGLSPHSPEKIEER 70 P + A+ + + L ++ Y TP RL + L G+ + + + Sbjct: 20 PPHALTRLADSFAQGIRTRLATRQLLTNEDAHPDIYATPRRLAVRLPGVRAQADAREIQI 79 Query: 71 LGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 GP V G A+ + G + + + K DV+ +P ++ DV Sbjct: 80 KGPSVAVGLDAQGQPTMALIKWAEKQGAEVSA--LTRGHDGKQDVFYWSSTQPGAVLADV 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + I+ + ++P PK M + ++ S++RP ++ + + ++ + + Sbjct: 138 IGEIIVETLAQLPIPKFMTYQLADG-LTTVSFVRPAHRLVVL-----HGDTVLPCTILGL 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGLE 242 IT GHRF + PI +++ D Y R L E V + + RR I N+ + G Sbjct: 192 AADRITDGHRFLSSGPITLENADSYARQLREQGHVEPEYQARRVMIANELAHSSQQNGGI 251 Query: 243 LVEDKD-------LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 L + + LL+E+ LVEW V+ G FD +L +P+E + L+++TNQ+ F Sbjct: 252 LAVNDEEQQQVTALLDEVAALVEWPAVYTGQFDPAFLAVPQECLILSMRTNQRYFPLFET 311 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G L N F++VSN++ D I+ GN RVV RL DA F+ +D+ Sbjct: 312 NGKLKNQFLIVSNMRIDDPSG-IIDGNERVVRPRLADAQFFFDQDRR------------- 357 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 + L R+ +L VV+HA++GTQ ER RIR L +A A VA +RA Sbjct: 358 -------ETLASRLPQL--AQVVYHARLGTQAERSERIRRLAAALAPATGASVADAERAA 408 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+K DL T +V EFPELQG +G+ YA E+ + DAI EH +PR + +P + + Sbjct: 409 QLAKTDLLTGMVGEFPELQGTMGRYYARHDGESEAVADAIAEHYQPRFAGDALPASPTGL 468 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 ++LADKL+TL W I ++P+G KDP+ALRR LG++RI++E K+ + L +E + Sbjct: 469 ALALADKLETLAGIWGIGQRPTGDKDPFALRRHALGVVRILIEGKLTLSLPALLEQAFSV 528 Query: 536 ------------------------------------------LFFHDRLKLYLHDRDIRH 553 F DRL+ YL DR Sbjct: 529 FDKLPAPAAADTEPSDKAAATGKKGRKEAVPQPFTADVPGLSAFVADRLRSYLRDRGFAG 588 Query: 554 DLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAI-EEKKNREISL 612 IEA+L D L + + L F E + KRI IL + + Sbjct: 589 TDIEAVLATGLDRLDLLEARLAALAAFRRLPAFESLTAANKRIGNILRKSAGEGAADDKA 648 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNV 672 + P L AE+ L + +Q + + + L ++ P++ FF+QV+VN Sbjct: 649 SVDPALLKEAAERDLNDALVKLQPQVQAHLQQQDFTAALQALAALQAPVDAFFEQVMVNA 708 Query: 673 DDREVRDNRLSLLQYIKNIILIVINVQKI 701 +D +R NRL+LL + ++ V ++ ++ Sbjct: 709 EDPALRRNRLALLGGLHALMNRVADLSQL 737 >gi|255541030|ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] gi|223548759|gb|EEF50248.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] Length = 1069 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 174/720 (24%), Positives = 343/720 (47%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F+LEI +EE+P + A++ L +++ LL+++ + + ++ + TP RL + ++ LS Sbjct: 388 FVLEIGTEEMPPQDVVHASQQLKDLVVQLLEKQRLRHGEVQAFGTPRRLVVCVESLSAKQ 447 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 PE E GP V G KA +GF R + D +K K + A + + Sbjct: 448 PEIEVEVRGPPVSKAFDEQGNPTKAAEGFCRRYNIPL--DSLFRKADGKTEYIYARVTEA 505 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL ++L +PVAI ++ +PK+MRW+ S + RP++ I+ + + ++ Sbjct: 506 ARLALEILSKDLPVAISRISFPKTMRWN------SQVMFSRPIRWIMAL-----HGDLVV 554 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + GNI+YG R ++V++ + Y + A + ++ E R+ +IL ++ LA Sbjct: 555 PFIYAGVLSGNISYGLRNTPSATVEVENAESYASIMRNAGIHIEIEERKRSILEHSNALA 614 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +V ++ ++LL E++ LVE +G F + +L LP++L+ + ++ +QK F Sbjct: 615 KSVNGHIIIQENLLNEVVNLVEAPFPVLGKFKESFLELPKDLLTMVMQKHQKYFAVTDET 674 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D + Sbjct: 675 GKLLPYFIAVANGAINEM--VVRKGNEAVLRARYEDAKFFYEMDTRKKFSEF-------- 724 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--AD-VALVDR 413 R + ++FH K+GT ++++RI + K++ L+ D + V Sbjct: 725 --------------RSQLKGILFHEKLGTMLDKMTRIENMVTKLSALLGIREDLLQTVQD 770 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ + PR + +P + Sbjct: 771 AASLAMSDLATAVVTEFTSLSGIMARHYALRDGYSEQVAEALLDITLPRFSGDVLPKTDV 830 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 I +++AD+LD+LI +A +PS + DP+ LRR + G+++I++E + ++ L+ + Sbjct: 831 GILLAVADRLDSLIGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKERNLDLAHALRLAA 890 Query: 534 LI--------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F RL+ YL D++I +++ ++L + Sbjct: 891 DVQPIKVDAHLIDDAYQFVTRRLEQYLVDKEISPEIVRSVLAERATLPCLAARTAYKMET 950 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + R +I+ K+ +E+ E+ L+++ + I Sbjct: 951 LSRGNLFPEVIEAYSRPTRIVR---GKDVVSDIEVDEAAFETAEERALWSIFLSTKSKIF 1007 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + ++ L +P+E FF+ V V V+D +R NRL+LL+ I ++ + ++ Sbjct: 1008 PDIEVDEFVEVSSELL---QPLEDFFNNVFVMVEDERIRKNRLALLKKIADLPRGIADLS 1064 >gi|255322368|ref|ZP_05363514.1| glycyl-tRNA synthetase, beta subunit [Campylobacter showae RM3277] gi|255300741|gb|EET80012.1| glycyl-tRNA synthetase, beta subunit [Campylobacter showae RM3277] Length = 677 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 189/725 (26%), Positives = 337/725 (46%), Gaps = 79/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + ++EI EE+PA K +++ L + G+ Y+TP R+ Y + Sbjct: 5 KELIVEIGVEELPAIPFLKECGNVAAKWRETLAQNGLD-SECEFYYTPRRIAFYHPKFAV 63 Query: 62 HSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E +G GA A F + G+ S+ + + K +V Sbjct: 64 RQEDGYSEFIGAPRQVAQKDGAWTPAALSFAKKCGIA-ESELKFETVGGK-EVLYYKKPV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L ++ + + + KSMRW F +IRP++S LC+L +++ Sbjct: 122 AGKPSAELLGDMIEKFLLGLNFGKSMRWGEGK-----FEFIRPVRSFLCLL-----GDEV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ G+ + HR + V++ Y + + V+LD RR IL++ ++ Sbjct: 172 VKFNKFDVESGDSIFMHRSVSYDKFTVKNAKDYFAAMPKIGVILDQNARREKILSEFKQI 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + G+ + D+ LL+E++ + E+ +G F++++L +P E+I ++K NQ+ F Sbjct: 232 EAKNGVTVEADEALLDEVVAITEYPTALLGGFEREFLEVPSEVIITSMKENQRYFPVF-E 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G LAN F++VSN + + A IV+GN +V+ ARL DA+ FW+ D + LK Sbjct: 291 GGKLANRFVVVSNAISPEP-ALIVKGNEKVLRARLSDAMFFWRSDLAHEFGPEKLK---- 345 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDA----- 406 ++ + ++G+ ++ R + L K A + A Sbjct: 346 --------------------NITYLKELGSTYDKSVRELGVAKRLAKICADRLKACAGEG 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 AL++RA++LSKADL T++V EF ELQG +G YA + EN + AI+E P G Sbjct: 386 YEALLERAVMLSKADLTTQMVYEFTELQGVMGGYYAAAKGENENVVTAIKEQYLPSGEAS 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ S V+LA KL+TLI ++ + PSG+KDPYALRRA G+I+II +++ ++ Sbjct: 446 ALPSTIFSSVVALAIKLETLIGLFSAGKIPSGNKDPYALRRAANGVIKIIQNENLNLDIA 505 Query: 527 QF----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 F + + LI F DRL + D+ +++A L + ++L + I Sbjct: 506 AFLRETAEGYAKFDVEALIGFIFDRLYTFF---DVNPSVVKACLASKKGDVLAQCEAIDA 562 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L ++ + + KR+ I+ E + E+EK+L Sbjct: 563 LGAICAADDFRQNFSTFKRLANIIK------DENFGSVDEAKFENESEKKLNDAFKAAVK 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 Y + L + I+ FFD V++N +D VR NRL+L+ I L + Sbjct: 617 ------AGGSYSERLKNLFGLKVAIDEFFDNVMINAEDELVRKNRLALVGQIYTEFLKIA 670 Query: 697 NVQKI 701 ++++I Sbjct: 671 DIKEI 675 >gi|229587216|ref|YP_002845717.1| glycyl-tRNA synthetase subunit beta [Rickettsia africae ESF-5] gi|259511930|sp|C3PLY4|SYGB_RICAE RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|228022266|gb|ACP53974.1| Glycyl-tRNA synthetase beta chain [Rickettsia africae ESF-5] Length = 664 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 224/702 (31%), Positives = 345/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 +PA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 13 MPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELANSHELIIKEDNRLVEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 240 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D +K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFCKQDI--------------------AKTLESRLGQL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 EAA--TFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +N+P+ ++LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNAEIAAAIRDHYKPQGLSDNLPSGNA-ALLALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I + FF Sbjct: 452 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFK 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFKN-DYDIALINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 664 >gi|94992904|ref|YP_601003.1| glycyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS2096] gi|94546412|gb|ABF36459.1| Glycyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS2096] Length = 650 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 193/698 (27%), Positives = 336/698 (48%), Gaps = 76/698 (10%) Query: 29 LIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV-------GAGKKA 81 + L E + +++++ + TP RL + + GL+ + E+ GP G KA Sbjct: 1 MATFLTENRLSFEDIQTFSTPRRLAVRVSGLADQQTDLTEDFKGPAKKIALDADGNFSKA 60 Query: 82 IDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLKTIVPVAIQKVPWPKS 140 GF+R GL T + I+ KG+ Y+ V + + ++VL V + + +P S Sbjct: 61 AQGFVRGKGLTTDA---IEFREVKGEEYVYVTKHEAGKPAKEVLLG-VTEVLSAMTFPVS 116 Query: 141 MRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPI 200 M W+ +F +IRP+ ++ +L ++ ++LD +I G ++ GHRF Sbjct: 117 MHWANN-----SFEYIRPVHTLTVLL-----NDEALELDFLDIHSGRVSRGHRFLGTET- 165 Query: 201 KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWV 260 + S D Y DL V++D + R+ I+ L G+++ D+DLL E++ LVE+ Sbjct: 166 TITSADSYEADLRSQCVIVDAKERQEMIVEQIKTLEVEQGVQVDIDEDLLNEVLNLVEFP 225 Query: 261 QVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQ 320 FMG+F+ KYL +PEE++ ++K +Q+ FV R + G L F+ V N +++ Sbjct: 226 TAFMGNFEAKYLDVPEEVLVTSMKNHQRYFVVRDQAGHLMPNFVSVRNGN-DQAIENVIK 284 Query: 321 GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFH 380 GN +V+ ARLED FW+ DQ + +A+L +V FH Sbjct: 285 GNEKVLVARLEDGEFFWREDQKL--------------------QIADLVAKL--TNVTFH 322 Query: 381 AKIGTQGERVSRIRVLGKKIA---QLIDADVALVDRAIVLSKADLCTEIVREFPELQGKI 437 KIG+ E + R RV+ +A L +V VDRA + K DL T +V EF ELQG + Sbjct: 323 EKIGSLAEHMDRTRVIAASLAKEANLSAEEVTAVDRAAQIYKFDLLTGMVGEFDELQGIM 382 Query: 438 GKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPS 497 G++YA+L E+ + AI EH P +P K+ + ++LADKLDTL++F+++ PS Sbjct: 383 GEKYALLAGEDAAVATAIREHYLPDAAGGALPETKVGVVLALADKLDTLLSFFSVGLIPS 442 Query: 498 GSKDPYALRRATLGIIRIILENKIDIPLSQFIE--------------DQNLILFFHDRLK 543 GS DPYALRRAT GI+RI+ IP+ + ++ +++ F R+ Sbjct: 443 GSNDPYALRRATQGIVRILDHFGWRIPMDKLVDSLYDLSFDSLTYTNKADVMNFIRARVD 502 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 + + D+ EAIL + ++ + + L + + + + S R F + Sbjct: 503 KMM-GKAAPKDIREAILASSTFVVPEMLAVAEALVKASHTENYKPAVESLSRAFNLAEKA 561 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 + S+++ P E E L+A I + + + ++ I Sbjct: 562 -----DASVQVDPSLFENEQENTLFAAIQGLTLAGSAAQQ-------LEQVFALSPVIND 609 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD +V +D+ +++NR+++L + + + ++ Sbjct: 610 FFDNTMVMAEDQALKNNRVAILSDLVSKAKTIAAFNQL 647 >gi|209886065|ref|YP_002289922.1| glycyl-tRNA synthetase, beta subunit [Oligotropha carboxidovorans OM5] gi|209874261|gb|ACI94057.1| glycyl-tRNA synthetase, beta subunit [Oligotropha carboxidovorans OM5] Length = 805 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 250/551 (45%), Positives = 347/551 (62%), Gaps = 37/551 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD L E++SEEIPARMQ KAA+DL ++ L EG++Y + + TP RL L + GL Sbjct: 1 MPDLLFELFSEEIPARMQAKAADDLRKMVTDKLVAEGLVYDGAKAFATPRRLALTVHGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 P+ EER GP+VGA AI GFL++TGL ++ + +I+KDPKKGD Y+A++ K R Sbjct: 61 GRQPDLKEERKGPKVGAPDAAIQGFLKATGLASLDEAKIQKDPKKGDFYIALIEKTGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DV+ I+PV ++ PWPK MRW + A +W+RPL SI+ E ++ D+ Sbjct: 121 IDVIAEILPVVVRTFPWPKQMRWGERSAKSGALTWVRPLHSIVATFGLETEDPDVVTFDV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I G +T GHRF AP V+ + Y+ L+ A V+LDP+ RR+ IL DA +LA A G Sbjct: 181 GGIKAGQVTRGHRFMAPAEFSVRRFEDYVAKLDAAKVMLDPQRRRDTILADAKQLAFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE---- 296 ELVED LLEE GLVEW MGSFD +L +P+E+IR TI+ NQKCFV R + Sbjct: 241 YELVEDDALLEEAAGLVEWPVALMGSFDPAFLAIPDEVIRATIRNNQKCFVVRDPKSGAA 300 Query: 297 -----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLP 345 G LA FIL++NI+ASDGG+AI+ GN RV+ ARL DA F++ D Sbjct: 301 SRTALGDAAPTGKLAPKFILIANIEASDGGSAIIAGNERVIRARLSDAKFFYETD----- 355 Query: 346 NLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID 405 L L++R+ + D ++VFH K+G+Q ER++RI L ++A L+ Sbjct: 356 ---------------LKTRLEERLNKFD--NIVFHEKLGSQAERIARIERLAAELAPLVG 398 Query: 406 ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 ADV RA L+KADL TE+V EFPE+QG +GK YA+ Q E+ S AIE+H KP+GP Sbjct: 399 ADVEKAKRAARLAKADLLTEVVGEFPEVQGLMGKYYALAQGEDASVAQAIEDHYKPQGPS 458 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 + VP++ ++I V+LADK+D L FWAI+EKP+GSKDP+ALRRA LG+IR+I +N + + + Sbjct: 459 DRVPSDPVAIAVALADKIDILTGFWAIDEKPTGSKDPFALRRAALGVIRLISDNSLRLKI 518 Query: 526 SQFIEDQNLIL 536 + + + + Sbjct: 519 IERLRSAHELF 529 Score = 186 bits (474), Expect = 7e-45, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 2/173 (1%) Query: 531 DQNLILFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKF 589 +++ FF DRLK+ L ++ RHDL++A+ D+LL +V ++ L +F + G+ Sbjct: 631 PSDVLSFFADRLKVQLREQGARHDLVDAVFALEGQDDLLMVVRRVEALGKFLDTDDGKNL 690 Query: 590 LLSAKRIFQILAIEEKKN-REISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYH 648 L KR ILAIEEKK+ R + L+ EK L I + ++ + + Sbjct: 691 LAGTKRAANILAIEEKKDKRSFTGAPDAALYKLDEEKALARAIDEVKAEAAAAVAREDFA 750 Query: 649 QIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 +L + ++ FFD+V VN DD+ VR+NRL LL I+ V + +I Sbjct: 751 GAMSVLAKLRPAVDAFFDKVKVNDDDKAVRENRLKLLNEIREATRAVADFSRI 803 >gi|161729085|ref|NP_221197.2| glycyl-tRNA synthetase subunit beta [Rickettsia prowazekii str. Madrid E] Length = 664 Score = 629 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 229/702 (32%), Positives = 346/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ + K EE G Sbjct: 13 IPAFMQKNAEEGYLKIFTKIFEENEI-FAKVQVFAGPRRITLHATHVPKVILPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + D K K Y V + +R +++L I+ AI Sbjct: 72 PSIEAPEIAINGFCKAHNVSKL-DLSTKLRNNK-LYYFFVKKTKERETKEILPKIIIDAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ L + NITYGH Sbjct: 130 NKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R +++ ++Y L E V+L+ R I LA+A L + +D L+EE Sbjct: 180 RLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDVCLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V N + Sbjct: 240 VTGLSEFPIVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVINGRFV 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + I+QGN +V++ARL DAL+F+K D +K L+ R+ +L Sbjct: 300 N-TELIIQGNEKVLSARLADALYFYKNDI--------------------AKTLESRLDKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 V+FH K+G+ E+V RI + + IA D + A L K+DL +++V EFP+ Sbjct: 339 K--SVIFHTKLGSLKEKVDRITDICRYIAP----DNIDLIMAAKLCKSDLVSDMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + Sbjct: 393 LQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGN-ATLLALADKLDSLVGLIIV 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRII+ENK++I I + FF Sbjct: 452 GETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR+ I Sbjct: 512 ERAKFYFKN-DYDITLINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + N++I+ + + EK L+ VI I + +K Y + +LL S+ + Sbjct: 568 M-----GNQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLK 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNTCEVFDKVAKFCRL 664 >gi|197122957|ref|YP_002134908.1| glycyl-tRNA synthetase subunit beta [Anaeromyxobacter sp. K] gi|254781843|sp|B4UG87|SYGB_ANASK RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|196172806|gb|ACG73779.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter sp. K] Length = 701 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 200/729 (27%), Positives = 337/729 (46%), Gaps = 67/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A L L L + + + +R TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPGALRQLEDDLAKALADARLAHGEVRSVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G A GF RS G++ + ++ KG+ Sbjct: 61 PKQTDARTEAFGPPVAQAYDAEGKPTPAATGFARSQGVEVSA--LVRAQTPKGERVAVTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R E VL ++ + + + K+MR S ++ RP++ ++ +L Sbjct: 119 VEKGRRAEQVLPALLERLVGGLRFRKAMR-----SRFDEATFARPVRWMVALLGGRP--- 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQ-SLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + E+ G +TYGHRF AP I ++ + D Y+ L A VL DP RR A+L + Sbjct: 171 --LKVRHGEVTSGKVTYGHRFLAPKAIALKGTPDDYLAKLRRAHVLADPVERRAALLAEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R ++ ED L+E+++ LVE +G F+K L LP E++ ++ +Q+ F Sbjct: 229 ARAGKEAAGKVREDPALVEQVLYLVEEPTAVVGEFEKSNLELPPEVVISEMRNHQRYFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS + D A G RV+ ARL DA F++ D+ Sbjct: 289 VDGKGRLKNRFVAVSATRVKDPAVA-RHGYERVLRARLADARFFFEEDRK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L +R+ L F AK+G++ +R RI + +A+ + D + D Sbjct: 338 ----------RKLHERIEDLGRR--TFQAKLGSELDRAQRIGAVASALARALGKDALVAD 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A L+K DL T +V EFPELQG +G YA L+ DAIE+H KP G E +P Sbjct: 386 LLEASRLAKVDLNTGMVGEFPELQGTMGAHYARLEGLKPEIADAIEDHYKPIGAAEELPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V++AD+L +L+ + EK +G+ DP+ LRRA +GI+RI++ + L+ +E Sbjct: 446 SDLGALVAVADRLHSLVGIIGVGEKATGAADPFGLRRAAIGILRIVIARGYHLSLAAAVE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F R++ +R DL+EA+L +D+++ Sbjct: 506 QTLDALSGVKLAAGRALVAEQVLDFLRGRVRAAWTER-FDADLVEAVLAAGSDDVVDARR 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L + + ++ KR+ I +EK + + P L AEK L A + Sbjct: 565 RLEALADAKARPDFGSLAVAFKRVANI---QEKAGGSGAAAVDPALLRDAAEKDLLAALE 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + ++ + FFD VLV +D +R NRL L++ + + Sbjct: 622 KVEQEVVARRAARDYPAVLRTVATLEPAVARFFDGVLVMAEDPALRANRLGLMRRVAALF 681 Query: 693 LIVINVQKI 701 + + +KI Sbjct: 682 SDLADFRKI 690 >gi|11467977|sp|Q9ZCB1|SYGB_RICPR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS Length = 665 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 229/702 (32%), Positives = 346/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ + K EE G Sbjct: 14 IPAFMQKNAEEGYLKIFTKIFEENEI-FAKVQVFAGPRRITLHATHVPKVILPKEEEIKG 72 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + D K K Y V + +R +++L I+ AI Sbjct: 73 PSIEAPEIAINGFCKAHNVSKL-DLSTKLRNNK-LYYFFVKKTKERETKEILPKIIIDAI 130 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ L + NITYGH Sbjct: 131 NKYSWTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNNITYGH 180 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R +++ ++Y L E V+L+ R I LA+A L + +D L+EE Sbjct: 181 RLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDVCLIEE 240 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V N + Sbjct: 241 VTGLSEFPIVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVINGRFV 300 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + I+QGN +V++ARL DAL+F+K D +K L+ R+ +L Sbjct: 301 N-TELIIQGNEKVLSARLADALYFYKNDI--------------------AKTLESRLDKL 339 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 V+FH K+G+ E+V RI + + IA D + A L K+DL +++V EFP+ Sbjct: 340 K--SVIFHTKLGSLKEKVDRITDICRYIAP----DNIDLIMAAKLCKSDLVSDMVGEFPD 393 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + Sbjct: 394 LQGIMGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGN-ATLLALADKLDSLVGLIIV 452 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRII+ENK++I I + FF Sbjct: 453 GETPNGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVISFFE 512 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR+ I Sbjct: 513 ERAKFYFKN-DYDITLINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNI 568 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + N++I+ + + EK L+ VI I + +K Y + +LL S+ + Sbjct: 569 M-----GNQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLK 623 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ + V ++ Sbjct: 624 PITSFFDNVLVNDSDPKIAQNRLSLLQNTCEVFDKVAKFCRL 665 >gi|322391802|ref|ZP_08065267.1| glycyl-tRNA synthetase beta subunit [Streptococcus peroris ATCC 700780] gi|321145282|gb|EFX40678.1| glycyl-tRNA synthetase beta subunit [Streptococcus peroris ATCC 700780] Length = 678 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 199/710 (28%), Positives = 326/710 (45%), Gaps = 75/710 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + L E + Y+ ++ + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLGEKMAAFLDENRLSYEGIQTFSTPRRLAIRVLGLAEQQTDLTEDFKGP 74 Query: 74 RV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 G KA GF+R GL I+ KG+ Y+ V + + T Sbjct: 75 SKKIALDADGNFSKAAQGFVRGKGLTVDD---IEFREIKGEEYVYVTKHEAGKPAKEVLT 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 +P + + +P SM W+ F +IRP+ +++ +L E +I G Sbjct: 132 GIPEVLASLSFPVSMHWANN-----TFEYIRPVHTLIVLLDDEALDLD-----FLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 ++ GHRF H ++++ D Y DL + V+ D R N I + G+++ D Sbjct: 182 RVSRGHRFLG-HEVEIRHADSYEEDLRKVYVIADSIERENMIREQIKAIEVEQGVQVQVD 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 + LL E++ LVE+ F+G+FD KYL +PEE++ +++T+Q+ FV R EG L FI V Sbjct: 241 EGLLNEVLNLVEYPTAFIGNFDPKYLEVPEEVLVTSMETHQRYFVVRDLEGNLKPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A + +++GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNA-EHLENVIRGNEKVLVARLEDGEFFWREDQKL--------------------KIE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---LVDRAIVLSKADLC 423 +A+L V FH KIG+ E + R + +A+ V + RA + K DL Sbjct: 340 DLVAKLS--HVTFHEKIGSLREHMIRSGQIAILLAEKAGLSVDETVDLARAAAIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L EN AI EH P +P +K+ ++LADKL Sbjct: 398 TGMVGEFDELQGVMGEKYALLAGENARVAQAIREHYLPDSADGALPESKVGAILALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE------------- 530 DTL++F+++ PSGS DPYALRRAT GI+RI+ + IP+ + I Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEDFGWKIPMDELIASLYALSFDSLTYD 517 Query: 531 -DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + ++ F R+ + D+ EA+L N + +++ + L E + + Sbjct: 518 NQEEVLNFIKARVDKMMGS--TAKDIKEAVLASSNFVVSDMIEAAEALTEAAKTEDYKSS 575 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R F + E S+++ E EK L + S Sbjct: 576 VESLSRAFNLAEKAEG-----SVKVDASLFENEQEKELAQEVESLELKGSAS-------D 623 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 L ++ I+ FFD +V +D +V++NRL++L + N V Sbjct: 624 KVAQLFALSPVIDAFFDNTMVMAEDVDVKNNRLAILVELVNKAKTVATFN 673 >gi|157829149|ref|YP_001495391.1| glycyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801630|gb|ABV76883.1| glycyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] Length = 670 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 228/702 (32%), Positives = 348/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 19 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRITLHATHLPKITLPKEEEIKG 77 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 78 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 135 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 136 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 185 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 186 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREEIIKTGLLELANSHELIIKEDNRLVEE 245 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 246 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 305 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D +K L+ R+ +L Sbjct: 306 NA-ELVIQGNEKVLSARLSDALYFCKQDI--------------------AKTLESRLGQL 344 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+VREFP+ Sbjct: 345 EA--VTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVREFPD 398 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI++H KP+G +NVP+ ++LADKLD+L+ Sbjct: 399 LQGIMGYYYAKHEGLNAEIAAAIKDHYKPQGLSDNVPSGNA-ALLALADKLDSLVGLMIA 457 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I + FF Sbjct: 458 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 517 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR I Sbjct: 518 ERAKFYFKN-DYDIALINAVLDL---NLVDTNFKLDELKEFLIEDAGKQLLNAYKRASNI 573 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 574 I-----GDQKITGLVDVSLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 628 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 629 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 670 >gi|296114875|ref|ZP_06833523.1| glycyl-tRNA synthetase, beta subunit [Gluconacetobacter hansenii ATCC 23769] gi|295978581|gb|EFG85311.1| glycyl-tRNA synthetase, beta subunit [Gluconacetobacter hansenii ATCC 23769] Length = 686 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 221/688 (32%), Positives = 344/688 (50%), Gaps = 63/688 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDL +L L + ++ R + P R+ + L+ + P + G Sbjct: 13 IPARMQQRAAEDLQRLLTEALSP--LDPRDARTFAGPRRIAISLE-VDATVPGSTVDERG 69 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 PR A KA+ GF+R G++ + + ++ P + +P + Sbjct: 70 PRESAPDKALAGFMRKHGVERDALVL------ENGFWVLRRDVPAVQAAAHIAVTIPALL 123 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK-------EIPC 185 ++ PWPKSMRW S+F+W+RPL+ I C+L +++ L + Sbjct: 124 RRFPWPKSMRWGVG----SSFTWVRPLRRIACVLDG-----QVVPFTLAEGDDNGHGLVA 174 Query: 186 GNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVE 245 N+T GHRF AP V ++ L V RR I RLA+ GL +V Sbjct: 175 ANLTEGHRFTAPGAFAVTGTQDWLSGLRARQVEPCAVARRTTIAEGVARLAAEEGLGVVS 234 Query: 246 DKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFIL 305 D L++E+ GL EW F+G D +++ LP E+++++++ NQ+ F R +G A F Sbjct: 235 DPALIDEVAGLTEWPVPFLGQIDDEFMTLPPEVMQVSMRVNQRYFALRNADGSAAPRFAF 294 Query: 306 VSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPL 365 V+N++ SDGGA + GN RV+ AR DA HFW D+ + L Sbjct: 295 VANMEPSDGGALTIAGNERVLRARFADARHFWDLDRTH--------------------TL 334 Query: 366 DQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTE 425 D R+A+LD +VFHA +G+QGERV RI L IA ++ AD +RA +L KADL T Sbjct: 335 DSRVAQLDR--IVFHASLGSQGERVRRIVRLAGLIAPMVGADTKQAERAALLCKADLTTG 392 Query: 426 IVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDT 485 +V EFPELQG +G YA E+ + DAI H PRG + VP +SI V+LADK+D+ Sbjct: 393 MVGEFPELQGTMGAYYARHDGEDSAVADAIGAHYMPRGQHDGVPHAPVSIAVALADKIDS 452 Query: 486 LINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--------- 536 L+ F+A EKP GS DPYALRRA LG+IRII EN + + L++ L Sbjct: 453 LVAFFAAGEKPGGSGDPYALRRAALGLIRIIRENHLRLDLAEIFVMAAHGLPENLRLAPD 512 Query: 537 ------FFHDRLKLYLHDRDIRHDLIEAI-LRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 F +RL++ L + RHD++ A+ + + ++ ++ L + ++ G Sbjct: 513 LDLLPQFVAERLRVQLRNEGARHDILAAVSVGNTDTDITRLLARSDALADMLATEDGRNL 572 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 L + KR IL IE++K+ P + E+ L ++ ++ ++ +R+ Sbjct: 573 LAATKRAANILRIEDRKDGPHEGAPDPALYAQDEERALADALAHTIPAVESAISEERFAD 632 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREV 677 + + ++ FF+ V VN +D + Sbjct: 633 AMRDVAHLRPVLDRFFEDVTVNAEDAAI 660 >gi|34581093|ref|ZP_00142573.1| glycyl-tRNA synthetase beta chain [Rickettsia sibirica 246] gi|28262478|gb|EAA25982.1| glycyl-tRNA synthetase beta chain [Rickettsia sibirica 246] Length = 664 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 226/702 (32%), Positives = 345/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIEAPEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELANSHELIIKEDNRLVEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 240 VVGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D +K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFCKQDI--------------------AKTLESRLGQL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 EA--VTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +N+P+ ++LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNAEIATAIRDHYKPQGLSDNLPSGNA-ALLALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRIILENK+++ I + FF Sbjct: 452 GETPTGSGDPYALRRQALGIIRIILENKLELNFDDLINFSINLYKDSSDENKNLIISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFKN-DYDIVLINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPRIIDSIADKDYKKALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVTKFNRL 664 >gi|220917749|ref|YP_002493053.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|254781842|sp|B8JDD8|SYGB_ANAD2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219955603|gb|ACL65987.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 701 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 198/729 (27%), Positives = 337/729 (46%), Gaps = 67/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A L L L + + + +R TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPGALRQLEDDLSKALADARLAHGEVRSVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P + E GP V G A GF RS G++ + ++ KG+ Sbjct: 61 PKQTDARTEAFGPPVAQAYDAEGKPTPAATGFARSQGVEVSA--LVRAQTPKGERVAVTK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R E VL ++ + + + K+MR S ++ RP++ ++ +L Sbjct: 119 VEKGRRAEQVLPALLERLVGGLRFRKAMR-----SRFDEATFARPVRWMVALLGGRP--- 170 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQ-SLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + + E+ G +TYGHRF AP I ++ + D Y+ L A VL DP RR A+L + Sbjct: 171 --LKVRHGEVTSGKVTYGHRFLAPKAIALKGTPDDYLAKLRRAHVLADPVERRAALLAEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 R ++ +D L+E+++ LVE +G F+K L LP E++ ++ +Q+ F Sbjct: 229 ARAGKEAAGKVRDDPALVEQVLYLVEEPTAVVGEFEKSNLELPPEVVISEMRNHQRYFAV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS + D A G RV+ ARL DA F++ D+ Sbjct: 289 VDGKGRLKNRFVAVSATRVKDPAVA-RHGYERVLRARLADARFFFEEDRK---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 + L +R+ L F AK+G++ +R RI + +A+ + D + D Sbjct: 338 ----------RRLHERIEDLGRR--TFQAKLGSELDRAQRIGAVASALARALGKDALVAD 385 Query: 413 --RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 A L+K DL T +V EFPELQG +G YA L+ DAIE+H KP G E +P Sbjct: 386 LLEASRLAKVDLNTGMVGEFPELQGTMGAHYARLEGLKPEIADAIEDHYKPIGAAEELPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + + V++AD+L +L+ + EK +G+ DP+ LRR+ +GI+RI++ + L+ +E Sbjct: 446 SDLGALVAVADRLHSLVGIIGVGEKATGAADPFGLRRSAIGILRIVIARGYHLSLAAAVE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F R++ +R DL+EA+L +D+++ Sbjct: 506 QTLDALSGVKLAAGRAVVAEQVLDFLRGRVRAAWTER-FDADLVEAVLAAGSDDVVDARR 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L + + ++ KR+ I +EK + + P L AEK L A + Sbjct: 565 RLEALADAKARPDFGSLAVAFKRVANI---QEKAGGSGAAAVDPALLRDAAEKDLLAALE 621 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + ++ + FFD VLV +D +R NRL L++ + + Sbjct: 622 KVEQEVVARRAARDYPAVLRTVATLEPAVARFFDGVLVMAEDPALRANRLGLMRRVAALF 681 Query: 693 LIVINVQKI 701 + + +KI Sbjct: 682 SDLADFRKI 690 >gi|145628143|ref|ZP_01783944.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] gi|144979918|gb|EDJ89577.1| glycyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.1-21] Length = 534 Score = 628 bits (1620), Expect = e-177, Method: Composition-based stats. Identities = 170/563 (30%), Positives = 275/563 (48%), Gaps = 48/563 (8%) Query: 153 FSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL 212 +IRP+ ++ +L +++I+ ++ + GHRF ++Q D Y + L Sbjct: 1 MQFIRPVHTVTMLL-----GDELIEGEILGVASARTIRGHRFLGEKEFEIQHADQYPQLL 55 Query: 213 -EEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKY 271 E+ V+ D R+ IL + A+A+G ++ LLEE+ LVE+ V F++++ Sbjct: 56 CEKGSVVADFNERKAEILAKSQAKATALGGVADIEESLLEEVTSLVEYPNVLAAKFEERF 115 Query: 272 LCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLE 331 L +P E + T+K +QK F ++G L FI VSNI D A I++GN +VV RL Sbjct: 116 LAVPAEALVYTMKGDQKYFPIYDKDGRLLPHFIFVSNINPEDPTA-IIEGNEKVVRPRLT 174 Query: 332 DALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVS 391 DA F+K D L + L R+ RL+ V+F K+GT ++ Sbjct: 175 DAEFFFKTD--------------------LKQKLVDRLPRLET--VLFQQKLGTLKDKTD 212 Query: 392 RIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 RI L +IA+ I AD A RA +LSK DL T +V EF + QG +G YA E+ Sbjct: 213 RIEQLAGEIAKQIGADEAKAKRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEV 272 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 A+ E PR + +P + ++ V+LADK DTL + I + P GS DP+ALRRA LG Sbjct: 273 AVALNEQYMPRFAGDELPKSLVASAVALADKFDTLTGIFGIGQAPKGSADPFALRRAALG 332 Query: 512 IIRIILENKIDIPLSQFIED---------------QNLILFFHDRLKLYLHDRDIRHDLI 556 +RII+E + + L ++ +++ F R + + D I D+I Sbjct: 333 ALRIIVEKNLPLDLEDLVKKSAALFGDKLTNQNVVADVVDFMLGRFRAWYQDEGIAVDVI 392 Query: 557 EAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISP 616 +A+L ++ ++ F + E + KR+ ILA + EI+L Sbjct: 393 QAVLARRPTRPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKADAAIGEINLTA-- 450 Query: 617 QYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDRE 676 + AEK L + T +Q + Y + D L ++ P++ FFD V+VN +D Sbjct: 451 --CVEPAEKALAEAVLALRTEVQPLIAQGDYTTVLDKLANLRMPVDSFFDNVMVNAEDPA 508 Query: 677 VRDNRLSLLQYIKNIILIVINVQ 699 +R NRL++L ++ + L V ++ Sbjct: 509 LRQNRLAILNTLQGLFLQVADIS 531 >gi|326404580|ref|YP_004284662.1| glycyl-tRNA synthetase beta subunit [Acidiphilium multivorum AIU301] gi|325051442|dbj|BAJ81780.1| glycyl-tRNA synthetase beta subunit [Acidiphilium multivorum AIU301] Length = 666 Score = 628 bits (1620), Expect = e-177, Method: Composition-based stats. Identities = 238/705 (33%), Positives = 358/705 (50%), Gaps = 45/705 (6%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F LE++SEEIPARMQ AAE L+ ++ L + ++++ + R+ + + + Sbjct: 1 MAEFFLELFSEEIPARMQEAAAEQLAKLVGAQL--APLSPRDIKAFGAARRIAV-VATID 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 PE E GP++ A +A++GFLR G + +++D +L P R Sbjct: 58 AEVPESASEVRGPKLSAPPQALEGFLRKNGAA--REELVEEDG----YFLLRRNLPSRPA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ A+ WPKSMRW AF+W+RPL+ ++C+L +I L Sbjct: 112 GELIAGEFAQALAGFGWPKSMRWG----QSGAFTWVRPLRRVVCLLDGA-----VIPFTL 162 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ + GHRF AP +V S + +L V++D + RR I A A G Sbjct: 163 GPVASGDQSEGHRFLAPGAFRVTSAAQWQEELRARRVIVDADERRKTIAEGLRAAAGAKG 222 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L + D LL+E+ GLVEW +G+ D + LP E+ L++K NQ+ F TR G A Sbjct: 223 LSVAGDAGLLDEVAGLVEWPVCLIGAIDPGQMALPPEVRELSMKVNQRYFATRDAAGNPA 282 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F V+NI A+DGGAAI+ GN RV+ ARL DA HFW +D+ Sbjct: 283 PYFAFVANIAANDGGAAIIAGNERVLRARLADAEHFWAQDRK------------------ 324 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVALVDRAIVL 417 + LD + +LD V FHAK+GTQ R RI L ++I A RA L Sbjct: 325 --QTLDSWLPKLDA--VTFHAKLGTQHARAGRIEALAREIALALGADAAAADAAARAGRL 380 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KADL + +V EFPELQG +G YA E + AI H +P+GP + VP+ +S V Sbjct: 381 CKADLVSGMVGEFPELQGIMGGYYAEASGEGDAIAGAIRTHYQPKGPSDEVPSGVVSAAV 440 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILF 537 +LADK+DTL F+ I E P+GS DP+ALRRA LG+IRI+LEN + + L + + F Sbjct: 441 ALADKIDTLREFFRIGETPTGSGDPFALRRAALGVIRIVLENGLRLNLMPLV-GAEVFDF 499 Query: 538 FHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRI 596 +RL++ L R D++ A+L +D+L ++ + L F +S G L + +R Sbjct: 500 LIERLRVKLRGEGKRFDVLNAVLDTARDDDLTRLIARTEALGAFLASEDGANLLAAYRRS 559 Query: 597 FQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHS 656 IL IE+ K+ I P L AE L + + + + + Sbjct: 560 TNILRIEDAKDGPHEGTIDPGLLAEAAEIALADALEAVDREAVRRLADEDFAGAMRGFAA 619 Query: 657 ICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + P++ FFD V VN E+R NRL LL +++++ V + K+ Sbjct: 620 LRAPVDAFFDHVTVNATGAELRRNRLRLLARLRDVMHRVADFSKL 664 >gi|163783650|ref|ZP_02178638.1| phosphoenolpyruvate synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159881055|gb|EDP74571.1| phosphoenolpyruvate synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 666 Score = 628 bits (1620), Expect = e-177, Method: Composition-based stats. Identities = 200/720 (27%), Positives = 338/720 (46%), Gaps = 76/720 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI +EE+P+ + L L +L +++ Y TP RL Y+K Sbjct: 1 MSDLLIEIGTEELPSSVIEPTLAFLKGRLSEVLGR-----EDIETYGTPRRLAFYVKEFV 55 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 ++ E GP G ++++GFL+ G + K KG+ + Sbjct: 56 DERVKREETVFGPPWHVAFDEEGKPTRSLEGFLKRYGARPGDV--FKGSKGKGEYVALKV 113 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 ++ + LK + VP PK MRW + ++ RP++ IL + + Sbjct: 114 VHEEKSRLEALKESFEDMLLSVPLPKRMRW----TSSKRITFSRPVRWILAL-----HGD 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL E+ T GHRF + I++ + Y+ +E+A V+ E RR +++ Sbjct: 165 RVVDLRFGELQSDRRTKGHRFLSGDWIELSKAEDYLSVMEKASVIPSIEERRGLVVDAVE 224 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A + + L++E+ LVE+ V +GSF++K+L LP EL+ +T+ + + F Sbjct: 225 EEARKLSAVPRYPEGLVDEVTNLVEYPFVVVGSFEEKFLELP-ELVIITVSAHHQRFFCL 283 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +R+G L N FI VSN I +G +V+ ARLEDAL F++ D Sbjct: 284 SRDGKLINKFIGVSNNLPK--TDLIRRGYEKVLRARLEDALFFYRED------------- 328 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 L + L++ + +L V+ H KIGT ++V R++ + +++ + D Sbjct: 329 -------LKRRLEELVPKLS--GVLIHPKIGTVLDKVERLKSISQRLCDELSCDEETRRK 379 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V+RA+ LSKADL TE+V+E ELQG +G YA+ Q E AI E KP+G ++ P Sbjct: 380 VERAVYLSKADLLTEMVKELDELQGYMGYIYALKQGEEEDVAKAIYEQYKPKGLEDDTPE 439 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + +SL+DK+D L++F++ E P GS DP+ LRRA+ G+ RI+ E DI +S+ E Sbjct: 440 TLVGAVLSLSDKIDDLVSFFSAGEIPKGSSDPFGLRRASFGVFRILEERNWDIDISRLFE 499 Query: 531 DQNLIL-------FFHDRLKLYLHDRDIRHDLIEAILRPE-NDNLLTIVDLIKHLNEFFS 582 + + F RL+ YL DL+ A+L+ E ++ +K L+ + Sbjct: 500 LYDRVDNVEELEKFLAQRLESYLERYGY--DLVRAVLKVESPFRPYRVIKKVKELSAVRN 557 Query: 583 SAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESM 642 +R+ +IL E + + E+ + L E L+ + + + Sbjct: 558 DKAFTDIYEGYRRVVKILPKEWE-----NSEVKEELLREPQEINLWREVRELESREFP-- 610 Query: 643 DHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L + + I+ FD VL+ D EV+ NRLSLL +K + + ++V Sbjct: 611 --------LSELAKLRKAIDDLFDNVLIMDKDEEVKRNRLSLLNRVKKLFNRYADFSEVV 662 >gi|88596501|ref|ZP_01099738.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|148926232|ref|ZP_01809917.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|218562846|ref|YP_002344625.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88191342|gb|EAQ95314.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112360552|emb|CAL35349.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845403|gb|EDK22496.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|315927143|gb|EFV06494.1| Glycyl-tRNA synthetase beta subunit [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 664 Score = 627 bits (1619), Expect = e-177, Method: Composition-based stats. Identities = 185/718 (25%), Positives = 333/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDP------KKGDVYLAVLR 114 + E +G K DG L G + +I ++ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYK--DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW +F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY QE Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|222823610|ref|YP_002575184.1| glycyl-tRNA synthetase, beta subunit [Campylobacter lari RM2100] gi|222538832|gb|ACM63933.1| glycyl-tRNA synthetase, beta subunit [Campylobacter lari RM2100] Length = 664 Score = 627 bits (1619), Expect = e-177, Method: Composition-based stats. Identities = 185/715 (25%), Positives = 338/715 (47%), Gaps = 72/715 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+E+ +EE+PA K ++S +L+E + + ++TP RL + Sbjct: 3 LLIEVGTEELPAIPLLKELPNISQKWEKILQEYHLE-AEFKFFYTPRRLVFIHENFKEKQ 61 Query: 64 PEKIEERLGPRVGAGKKAIDGFLRSTGLQTISD------CQIKKDPKKGDVYLAVLRKPK 117 + E +G K DG L GL + K+ K +V + Sbjct: 62 DDSFVEFIGAPKTIAYK--DGKLTQAGLSFLEKSGLKEEELEFKEIKGKEVLYCQKQVQG 119 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 ++VL ++ ++ + + K+MRW +F +IR ++S+ CIL +++++ Sbjct: 120 LQSKEVLAKMIETFLKSLSFGKTMRWGDG-----SFEFIRAIRSLCCIL-----NDELVE 169 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 + + T+ HR + I +++D Y + LE+ V+LD E R+ I+ L Sbjct: 170 FESYGVKSAKSTFVHRSVSYDLISFKNIDEYFKILEKNYVILDQEQRKKLIIEQLKTLEK 229 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + ED +LL E++ + E+ + +G F+K+YL +P E+I +++ NQ+ F + Sbjct: 230 ENDIMISEDDELLAEVVAITEYPKALLGHFEKEYLEIPSEVIITSMRENQRYFAVF-KNN 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N F++VSN D + I+ GN RV+ ARL DA+ FWK D Sbjct: 289 TLSNHFVVVSNAVCKDY-SKIINGNERVLRARLSDAMFFWKND----------------- 330 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAIV 416 L Q + + +V+ +GT +++ R + + K+ ++ + + +AI Sbjct: 331 -------LAQGLNNDKISQMVYLEGLGTLKDKIIREQKVATKLCEIFANTQKNEILKAIE 383 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 SKADL T++V EF +LQG +G YA + AI+E P G +P+N+ S Sbjct: 384 YSKADLSTQMVYEFTDLQGIMGSYYAKAMGMSDEIALAIKEQYLPNGDNSAMPSNEFSSI 443 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL-- 534 V+LA+KLDTL+ ++I + PSG+KDPYALRRA G+++IIL + L F+E Sbjct: 444 VALANKLDTLMGLFSIGKIPSGTKDPYALRRAANGVLKIILALNKNFDLKVFLEAIASEY 503 Query: 535 --------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + F +RL + + I+A+L +N +++ I IK L + + A Sbjct: 504 KSFDLKILLDFILERLYTFY---NANPSFIKAVLSSKNYDIVYIDSCIKALIQSANKADF 560 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + + KR+ I+ + E +I+ + EK LY Sbjct: 561 SQNFATFKRLANIVVLSEA-------QINENLFNTQEEKDLYQAFMQCKAK------ENN 607 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + L ++ I+ FFD+V++N D +++NR +L+ I + L + +++++ Sbjct: 608 TQELLESLFALKPQIDAFFDKVMINDKDENIKNNRQALVCAIYHEFLKIADIKEL 662 >gi|114331843|ref|YP_748065.1| glycine--tRNA ligase [Nitrosomonas eutropha C91] gi|122313421|sp|Q0AEY2|SYGB_NITEC RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|114308857|gb|ABI60100.1| glycyl-tRNA synthetase beta chain [Nitrosomonas eutropha C91] Length = 715 Score = 627 bits (1619), Expect = e-177, Method: Composition-based stats. Identities = 210/731 (28%), Positives = 348/731 (47%), Gaps = 74/731 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEKIEE-R 70 P + K + ++ LK++ + + + +P RL ++L +S +P++I + Sbjct: 16 PPKSLVKLGNAFATLIADSLKQQYLTTPDTVSTVFASPRRLAVHLTAISVQAPDQIVTLK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKK-DPKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + G++ ++ +K+ K ++ L+ Sbjct: 76 LMPVAVGLDAQGQPTPALHKKLAALGVENVAVSALKRVQEGKAEMLFLEQSVTGILLAAG 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ V AI+++P K M + +IRP ++ + ++I+ + Sbjct: 136 LQKAVDEAIRQLPVAKMMTYQ-LDDGWENVHFIRPAHGLIAL-----HGQQIVPISALGF 189 Query: 184 PCGNITYGHRFHAPH-PIKVQSLDHYIRDLE-EAMVLLDPECRRNAILNDAHRLASAVGL 241 GN T GHRF A + + DHY LE E V+ + RR+ I A L Sbjct: 190 AAGNTTRGHRFEAKQAELVIDHADHYEYILETEGTVIPGFDRRRSRIREGLETATRAAQL 249 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 + +ED LL+E+ LVE V MG+F +L +P+E + T+K NQK F +G L N Sbjct: 250 QCIEDAALLDEVTALVERPNVLMGTFSADFLEVPQECLISTMKINQKYFPLLDADGKLTN 309 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI +D G I+ GN RV+ +RL DA F+ D+ Sbjct: 310 RFLIVSNITPADPGQ-IIAGNERVIRSRLADAKFFFDHDRK------------------- 349 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRAIVLSK 419 + L R+ LD V++H ++G+QGER +R L + I QL+D A ++A +L+K Sbjct: 350 -RTLASRLPDLD--KVIYHHQLGSQGERTRYVRALAQIIGQLLDNGDLPAQANQAAMLAK 406 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL T++V EFPELQG +G+ YA + + + AIE+H KPR + +P + I V+L Sbjct: 407 ADLLTDMVGEFPELQGIMGRYYAQREGVDETIAFAIEDHYKPRFAGDALPRSMTGICVAL 466 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--- 536 ADKL+TLI+ ++I + P+G KDPYALRR LG+IRI++E + I L I +L Sbjct: 467 ADKLETLISLFSIGQFPTGDKDPYALRRHALGVIRILIEKDLPIGLDVLISRAAGVLRDE 526 Query: 537 -------------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 FF+DRL L D+ +E++L L I Sbjct: 527 ISGEQGPESSHARPVTPQLTEQLQDFFYDRLASSLRDQGYTVQEVESVLNLRPSLLCEIP 586 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 + + F + + + KR+ IL +K + ++ I L AE LY + Sbjct: 587 RRLAAVRAFTALPEAASLAAANKRVSNIL---KKSEFDATVSIDKACLQAPAEIALYRAL 643 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 S+ + + + Y +L ++ PI+ FFDQV+VN ++ +R NRL+LL ++ Sbjct: 644 SEIESDARHAFQKGDYVTALQMLAALKAPIDAFFDQVMVNDENEVLRRNRLALLAALQAT 703 Query: 692 ILIVINVQKIV 702 + V ++ ++ Sbjct: 704 MNRVADISRLA 714 >gi|57238106|ref|YP_179356.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni RM1221] gi|57166910|gb|AAW35689.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni RM1221] gi|315058666|gb|ADT72995.1| Glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni S3] Length = 664 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 182/718 (25%), Positives = 330/718 (45%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDP------KKGDVYLAVLR 114 + E +G K DG L G + +I ++ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYK--DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW +F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE--- 530 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L + +E Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKKFDIQILLEKLS 501 Query: 531 -------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY QE Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|205356253|ref|ZP_03223019.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8421] gi|205345858|gb|EDZ32495.1| glycyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8421] Length = 664 Score = 627 bits (1618), Expect = e-177, Method: Composition-based stats. Identities = 185/718 (25%), Positives = 332/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDP------KKGDVYLAVLR 114 + E +G K DG L G + +I ++ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYK--DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW +F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++A+L N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSHNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY QE Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|242309038|ref|ZP_04808193.1| glycyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239524462|gb|EEQ64328.1| glycyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 682 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 216/722 (29%), Positives = 338/722 (46%), Gaps = 70/722 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 FLLEI ++E+PA ++ L +L+ ++ + Y+TP RL + Sbjct: 5 FLLEIGTQELPAIPLLAEIPNIKQKLSKILQNHRLLC-DFDFYYTPRRLVIIANQFPTSQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 ++ E GP G +A F + G+ I KD K ++ PK Sbjct: 64 SPQVLEFFGPPTTIAYKDGNPTQAALSFFKKCGITQEEASTITKDNK--EILYFKKESPK 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +D+L+TI ++ + + K+MRW S+IRP+ ILC+L I Sbjct: 122 APAQDLLQTITKEFLESLNFGKTMRWGDQKE-----SFIRPISWILCLLNNTP-----IS 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L+L + N T+ HR + P +V S+D+Y L+ MV+L+ E RR IL + + S Sbjct: 172 LNLYGVVSQNQTFIHRNISFAPQEVTSIDNYFEILKRGMVILNQEDRRTKILQEIQEIQS 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 +++ D++LLEEI+ + E+ G F +++L LP I ++K NQ+ F T E Sbjct: 232 QKNIKVEIDENLLEEIVCITEYPTALFGEFSERFLELPAPCIITSMKVNQRYFATYKGE- 290 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN A D A I+QGN +V+ ARLEDAL F+ D N LK Sbjct: 291 NLYNGFIVVSNSLAQDSNA-IIQGNIKVLRARLEDALFFYHNDLKNGFMPEKLK------ 343 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL-----------IDA 406 +V F +G+ ++ R R + K IA L I Sbjct: 344 ------------------NVTFVEGLGSMWDKTQRERQIIKLIAPLFTKNLEKENQDIGL 385 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + ++D+A + SKADL +E+V EF ELQG +G YA + AI+E P Sbjct: 386 TLEILDQASMFSKADLMSEMVYEFTELQGIMGYYYANALGYDSKVALAIKEQYLPNSEES 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+N IS V+LA KLD L ++I++ PSGS+DP+ALRRA +GII+IIL + L Sbjct: 446 PLPSNLISAFVALAYKLDNLFALFSIHKIPSGSRDPFALRRAAIGIIKIILHFNLSFDLQ 505 Query: 527 QFIEDQNLIL--FFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + + F +L+ ++ +R D L+ AIL N+L I + LN Sbjct: 506 KISSLLSPLYKPFDLQQLENFILERMDSMFDYNPSLLRAILATNEKNILQIYQKLDALNS 565 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 +A + + KR+ I ++ N SL I LL E L+ + Sbjct: 566 VLKNADKNLLMQTFKRVANIT---KEVNLSSSLAIKQDKLLATEEIELHKAFCLYEEKSP 622 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y + +L + + FFD+VLVN D + R+NR +L+ I L + +++ Sbjct: 623 TL----NYQEQLQMLLDLNPLLSRFFDKVLVNAPDEDFRNNRKNLIARIYQAFLNIADIR 678 Query: 700 KI 701 +I Sbjct: 679 EI 680 >gi|284926458|gb|ADC28810.1| glycyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni IA3902] Length = 664 Score = 626 bits (1616), Expect = e-177, Method: Composition-based stats. Identities = 185/718 (25%), Positives = 333/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDP------KKGDVYLAVLR 114 + E +G K DG L G + +I ++ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYK--DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW +F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFY---AVNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY QE Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|86150570|ref|ZP_01068793.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85838921|gb|EAQ56187.1| glycyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] Length = 664 Score = 626 bits (1616), Expect = e-177, Method: Composition-based stats. Identities = 184/718 (25%), Positives = 333/718 (46%), Gaps = 73/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ +L+E ++ + + Y+TP RL + + + Sbjct: 1 MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLV-SDFKFYYTPRRLVFFHENFA 59 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDP------KKGDVYLAVLR 114 + E +G K DG L G + +I ++ K +V Sbjct: 60 DKQEDSFAEFIGAPKNVAYK--DGVLTPAGQSFLQKARISENELSFKEIKGKEVLYHQKA 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +++L +V ++ + + KSMRW +F +IR ++SI CIL ++ Sbjct: 118 IKGLQSQEILGEMVEKFLKSLSFGKSMRWGAN-----SFEFIRAIRSIACIL-----NDE 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +++ + T+ HR + + Y LE+ ++LDP R+ IL Sbjct: 168 LVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + S +++ ED++LL E++ + E+ +GSF++++L +P E+I +++ NQ+ F Sbjct: 228 IESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQRYFAVFN 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN + + I+ GN RV+ ARL DA+ F++ D N Sbjct: 288 DKG-LSNHFIVVSNAVCKNY-SKIIHGNERVLRARLSDAMFFYQNDLQNGLKPE------ 339 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-ALVDR 413 + + + +GT ++ R + + + Q++ D + Sbjct: 340 ------------------KLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENIST 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ +KADL T++V EF +LQG +G YA + C AI+E P +P+ + Sbjct: 382 ALKYAKADLATQMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEF 441 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL----ENKIDIPLSQF- 528 S V+LA+KLDTLI ++I + PSG+KDPYALRRA GII+I L E I I L + Sbjct: 442 SSIVALANKLDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLS 501 Query: 529 -----IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 + Q L F +RL + + ++A+L +N +L+ I + L + Sbjct: 502 NHYKSFDMQILKDFIFERLYTFYT---VNASFVKAVLSSQNTDLIHINQSVNALIKLSKK 558 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I K + + EAE +LY QE Sbjct: 559 DNFNENFATFKRLANIATKNPHK-------VDESLFVQEAESKLYKAF-------QEKTK 604 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + + L ++ I+ FF+QV++N +D ++++NR +L+ I L + +++++ Sbjct: 605 ANSLQEKLENLFALKPFIDEFFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKEL 662 >gi|325478380|gb|EGC81495.1| glycine--tRNA ligase, beta subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 688 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 216/732 (29%), Positives = 363/732 (49%), Gaps = 76/732 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M ++LLEI EEIP+ L L+ + + + TP R ++L+ ++ Sbjct: 2 MSNYLLEIGVEEIPSDYVKNTKNQLKEKFEKLITDNKLTCDEIVVESTPRRFAIFLENIN 61 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EK GP V G KK + GFL+ G + ISD I++ KG+ Y+ V Sbjct: 62 ADTEEKTISVKGPSVKIAYDEGGEPKKPLLGFLKGQGAE-ISDVVIRE--FKGEDYIYVE 118 Query: 114 RKPK-RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 +K K + + +VL+ V ++ + +P+SMRW + W RP++ + +L Sbjct: 119 KKEKAKSVAEVLEENVYDLVKSISFPRSMRW-----RGKSIRWARPIRWFVSLL-----D 168 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ D ++I NIT GHR + I V +++Y + L E V+L + R++ IL Sbjct: 169 DEILAFDAEDISVSNITKGHRSLGSNHIVVDKIENYEKLLRENYVILRYKDRKDLILRGL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +RL+S VG E ++D DLL+E+I +VE+ V +G DKKYL LP+E+I +K +Q+ F Sbjct: 229 NRLSSEVGGEYMKDADLLDEVINIVEYPTVLIGDIDKKYLELPKEVITTPMKDHQRYFPV 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 L F+LV N + +V+GN +V+ ARLEDA F+ D Sbjct: 289 EDENKNLLPYFLLVRNGDDT-HSENVVEGNKKVLVARLEDAKFFYDID------------ 335 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK--KIAQLIDADVAL 410 + KPLD + L+ ++ F +G + R+ L + ++A I D+A Sbjct: 336 --------MKKPLDAYVDDLE--NLAFFEGLGDMKLKTKRLERLAENYRLALDIGDDMAH 385 Query: 411 -VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + RA LSKADL T++V EF ELQG +G+ YA E AIEE PR + +P Sbjct: 386 PIGRAAYLSKADLVTKMVVEFTELQGTMGRIYAEKSGEEERISTAIEEAYMPRSAGDKLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 I +S+ADK+DT++ +AI + +GS+DP+ LRRA LGII I LEN ID+ L + I Sbjct: 446 KTITGIVLSIADKMDTIVGLYAIEKYVTGSQDPFGLRRACLGIINIFLENSIDVDLRKLI 505 Query: 530 -------------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTI 570 + + FF DRL+ L D ++D + A+L+ N+L + Sbjct: 506 GDALLIYTEENELSFDYDLAMEKTLDFFRDRLRNKLIDDGHKYDTVNAVLKDGELNILKL 565 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 ++ L++F + E + R+ + + + E++ L + EK +A Sbjct: 566 TKKVEALDKFL--EENEDQISYFTRVVNL------SDSNVGEEVNKDLLEGDLEKDFFAE 617 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + G + + S Y + + + E + D ++NV+D +++ NR+++L + Sbjct: 618 VKALGEYKESS--ETDYLKELENIKMTSEVGNNYLDNTMINVEDEDLKANRIAMLNILAR 675 Query: 691 IILIVINVQKIV 702 I + +V+++ Sbjct: 676 RIKEIFDVKELA 687 >gi|260583948|ref|ZP_05851696.1| glycyl-tRNA synthetase, beta subunit [Granulicatella elegans ATCC 700633] gi|260158574|gb|EEW93642.1| glycyl-tRNA synthetase, beta subunit [Granulicatella elegans ATCC 700633] Length = 691 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 189/716 (26%), Positives = 344/716 (48%), Gaps = 68/716 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ ++E L+ + K+E + ++++ + TP RL + + GL ++IE GP Sbjct: 15 PAQYVRTSSEQLATRVEDFFKQENLAFESVEAFATPRRLAVRVNGLEEEQKDRIEIFKGP 74 Query: 74 RV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTI 127 + GA KA +GF+R GL T I + K Y+ V + K + Sbjct: 75 SLAIAQKDGAWTKAAEGFVRGKGLTTDD---IYVETIKDVDYIHVKQLLKGKSTKEVVKN 131 Query: 128 VPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGN 187 + I + +P +MRW+ F ++RP+ I+ + E +E + + ++ G Sbjct: 132 LSSVITDMKFPVTMRWAAH-----TFEYLRPIHWIVALYGEEVIEE----IQVLDVKAGR 182 Query: 188 ITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDK 247 ++ GHRF ++ S + Y + L E V+++ + R+ + LA+ + D+ Sbjct: 183 VSRGHRFLGKDT-EIASPEQYEKALAEQFVIVNQDERKALVRKQIEELAAKNAWIVPIDE 241 Query: 248 DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVS 307 +LLEE+ ++E+ F G+FD+KYL +PE ++ ++K +Q+ FV +G L FI Sbjct: 242 ELLEEVSSILEYPTAFAGTFDEKYLVVPEPVLVTSMKEHQRYFVVYNAKGKLQPYFISAR 301 Query: 308 NIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQ 367 N + +GN +V+ ARLEDAL F++ D+ P+ Sbjct: 302 NGN-DYMIENVAKGNQKVLTARLEDALFFYEEDKKV--------------------PMTA 340 Query: 368 RMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLCT 424 + +L+ L+ FHAKIG+ E+++R+++L +IA ++ DV RA + K DL T Sbjct: 341 FLKKLETLN--FHAKIGSMTEKMNRVQLLVGRIASELNLDAKDVETAQRAAEIYKFDLVT 398 Query: 425 EIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLD 484 +V EFPELQG +G+ Y+ E AI EH P +P++ +++ADKLD Sbjct: 399 NMVGEFPELQGIMGEIYSKNYGETPEVARAIREHYMPISADAELPSSVPGALLAIADKLD 458 Query: 485 TLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE-------------- 530 T ++F A P+GS DPYALRR +G+++I+ + + + F + Sbjct: 459 TFLSFTAAGMLPTGSNDPYALRRQVMGLVQILEAFEWHLDIDDFAKTLLALDYASFLVDK 518 Query: 531 ----DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 ++ F +RL + RHD+IEA+L ++++ + + L + ++++ Sbjct: 519 KEDVQAFILGFIRERLAQRMTSISKRHDVIEAVLNSNSNSVPEKMQAVAVLEKEVTTSEI 578 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + + R+ I A + R S E S + E+E++L I+ + ++ Sbjct: 579 KDITEALNRVINISAKGFDEARH-SSEYSLDKVETESERQLVESIATLRKDFENYSAEEK 637 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 + SI I FF++ +V VD+ E+R NRL L+ + +IL + +++ Sbjct: 638 FA----AFASITPKIHEFFNENMVMVDNEEIRTNRLRFLRELALMILEFADFTELI 689 >gi|91206174|ref|YP_538529.1| glycyl-tRNA synthetase subunit beta [Rickettsia bellii RML369-C] gi|157826524|ref|YP_001495588.1| glycyl-tRNA synthetase subunit beta [Rickettsia bellii OSU 85-389] gi|122425155|sp|Q1RGS4|SYGB_RICBR RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|229558573|sp|A8GUQ4|SYGB_RICB8 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|91069718|gb|ABE05440.1| Glycyl-tRNA synthetase beta chain [Rickettsia bellii RML369-C] gi|157801828|gb|ABV78551.1| glycyl-tRNA synthetase subunit beta [Rickettsia bellii OSU 85-389] Length = 658 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 223/700 (31%), Positives = 341/700 (48%), Gaps = 65/700 (9%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA +Q A E I + +E + + ++ + P R+ LY L + K E G Sbjct: 13 IPAFIQKDAEEGYLSIFTKIFEENEI-FAKIQVFSGPRRITLYATHLPKVTLPKEIEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P A + AI+GF ++ + + K Y + + +R I+++L I+ AI Sbjct: 72 PSTEAPEAAINGFCKAHNVSKLELST--KLINNQLYYFYIKKVEERQIKEILPEIIVEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W + WIRPL++ILCI +E I+ L + N+T+GH Sbjct: 130 NKYSWAKSMFWGNYN-----IKWIRPLRNILCIFDSE-----ILPLQFGHLAANNVTFGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I A++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYKTKLTENYVILERLKREEIIKTSLLEQANSHNLTIKEDLRLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V G+ +K+L LP+E++ +++T+QK F R A F+ VSN Q + Sbjct: 240 VAGLSEFPVVLCGAIPQKFLELPKEVLISSMRTHQKYFCLFDRSENFAPYFLFVSNGQFA 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + +VQGN +V++ARL DAL+F+K+D SK L+ + +L Sbjct: 300 NS-KLVVQGNEKVLSARLSDALYFYKQDI--------------------SKTLEANLEKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 V FH K+G+ E+V RI + K I D D + A L K+DL +E+V EFPE Sbjct: 339 --AAVTFHTKLGSLKEKVERITNICKYI----DPDNKDLITAAKLCKSDLVSEMVGEFPE 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA +N N AI +H KP+G ++VP + +++ADKLD+L+ Sbjct: 393 LQGIMGYYYAKHENLNEEIAVAIRDHYKPQGLSDSVPVGN-AALLAIADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-----------FFHDR 541 E P+GS DPYALRR LGIIRII+ENK+++ L+ I+ + FF +R Sbjct: 452 GEAPTGSGDPYALRRQVLGIIRIIIENKLELNLNSLIDFSLKLYSSDKDKDLIISFFEER 511 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 K Y + LI A+L NL I + L EF G++ L + KR IL Sbjct: 512 AKFYFKNE-YDISLINAVLDL---NLANIKFKLDALKEFLEKEDGKQLLNAYKRASNIL- 566 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 ++ I + P + EK L+ V I + K Y + +LL ++ PI Sbjct: 567 ----GSQNIDGAVEPSLFNTQPEKELFEVTQKLSLQIVD----KDYDKALNLLQTLLTPI 618 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD VLVN D ++ NRL +LQ + + + ++ Sbjct: 619 TSFFDNVLVNDSDPKIAKNRLLILQDVCKLFHKIAKFNRL 658 >gi|300214614|gb|ADJ79030.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus salivarius CECT 5713] Length = 636 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 193/668 (28%), Positives = 304/668 (45%), Gaps = 73/668 (10%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M FLLEI EEIPA + + L LKE+ + + + Y TP RL + + GL Sbjct: 1 MAHTFLLEIGLEEIPAHVVTPSVNQLVQKTTKFLKEQRIDFDEVIPYSTPRRLTVKVTGL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF+R G+ I KG Y+ V Sbjct: 61 ADKQADIEEEAKGPSKKIALDDEGNWSKAAQGFVRGQGVTVDD---IFFKELKGTEYVYV 117 Query: 113 LR-KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + P + + +VL + VA+ + +P MRW + F ++RP+K ++ +L Sbjct: 118 KKFIPGKPVAEVLTGMKDVAMD-LKFPTMMRWGSND-----FEYVRPIKWLVALL----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +++ ++ +I G T GHRF + V S D Y+ LE V+ D R+ I Sbjct: 167 DNEVVPFEILDIKTGRTTQGHRFLG-EAVDVPSADKYLETLETQKVIADAGVRKAEIRKQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ +V D+DLLEE+ LVE+ VF G F ++YL +P E++ ++K +Q+ F Sbjct: 226 IDALATEKNWNIVVDEDLLEEVNNLVEYPTVFAGKFKEEYLQVPNEVLITSMKDHQRFFY 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +EG L F+ V N D ++ GN +V+ ARLEDA F++ DQ + Sbjct: 286 VTDKEGNLLPNFVSVRNGN-KDYLENVIAGNEKVLTARLEDAKFFYEEDQQH-------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DV 408 + + RL V+FH KIGT E++ R+ +L K + + ++ Sbjct: 337 ------------TIADYVERLK--KVMFHDKIGTIYEKMERVNLLAKFLGNKLGLSETEL 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 +DRA ++ K DL T +V EF ELQG +G+ YA LQ E+ + AI E P + Sbjct: 383 KDLDRASMIYKFDLVTGMVGEFSELQGIMGEIYARLQGEDDNVSTAIREEYMPTSSEGEL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + + +S+ADKLD++ +F+A N PSGS DPYALRR LGIIRI L+ DI L Sbjct: 443 PQSNVGAVLSIADKLDSIQSFFAANMIPSGSNDPYALRRQALGIIRIALDKGWDISLPVL 502 Query: 529 IEDQNLIL---------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 N F DRL L R D+++A++ + Sbjct: 503 HAAINYAYAEREDLYKNTQPIANISETDTFVIDRLAQVLSGNKFRRDILDAVVTGADMPF 562 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 + + + L++ ++ + + R+ ++ + + EK L Sbjct: 563 IQALQAAQVLSKHAEDNDFKEVIEALTRVTRLAKKAPXFXXDAXX--DSTLFENDTEKXL 620 Query: 628 YAVISDFG 635 + Sbjct: 621 ADXFAKXE 628 >gi|225869069|ref|YP_002745017.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. zooepidemicus] gi|259511932|sp|C0MDQ3|SYGB_STRS7 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|225702345|emb|CAX00162.1| glycyl-tRNA synthetase beta chain [Streptococcus equi subsp. zooepidemicus] Length = 679 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 193/712 (27%), Positives = 321/712 (45%), Gaps = 74/712 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA + + + L + LK+ + Y + + TP RL + + GL+ + E+ GP Sbjct: 15 PAYVVTPSEKQLVQRMADFLKDNRLSYDAIEGFSTPRRLAVRVLGLADQQTDLTEDFKGP 74 Query: 74 RVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKT 126 KA GF+R GL I+ KG+ Y+ V + + Sbjct: 75 SKKIALDADGQFSKAAQGFVRGKGLTVDD---IEFREVKGEEYVYVTKHEAGKQAKGVLA 131 Query: 127 IVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCG 186 VP + + +P SM W+ +F +IRP+ S++ +L ++ ++LD +I G Sbjct: 132 AVPEVLASLTFPVSMHWANN-----SFDYIRPVHSLIVLL-----DDEPLELDFLDIHSG 181 Query: 187 NITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVED 246 I+ GHRF + S D Y DL V+ + R+ I+ + + +++ D Sbjct: 182 RISRGHRFLGEET-SITSADSYEADLRSQFVIASAKERQEMIIAQIRAIEAEQKVQVDID 240 Query: 247 KDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILV 306 +DLL E++ LVE+ FMGSFD KYL +PEE++ ++K +Q+ FV R + G L FI V Sbjct: 241 EDLLNEVLNLVEYPTAFMGSFDPKYLEIPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISV 300 Query: 307 SNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLD 366 N A +++GN +V+ ARLED FW+ DQ ++ Sbjct: 301 RNGNAK-HLQNVIKGNEKVLVARLEDGEFFWREDQKLF--------------------IE 339 Query: 367 QRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLC 423 +A+L V FH KIG+ E + R +V+ +A A+ + V RA + K DL Sbjct: 340 DLVAKL--AHVTFHEKIGSLAEHMDRTKVIAAFLADQAGLSEAEKSAVARAAQIYKFDLL 397 Query: 424 TEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKL 483 T +V EF ELQG +G++YA+L E + AI EH P +P K+ ++LADKL Sbjct: 398 TGMVGEFDELQGIMGEKYALLAGEAAAVATAIREHYLPDSAEGELPETKVGAVLALADKL 457 Query: 484 DTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF--------------I 529 DTL++F+++ PSGS DPYALRRAT GI+RI+ IP+ + Sbjct: 458 DTLLSFFSVGLIPSGSNDPYALRRATQGIVRILEHFGWSIPMDKLIDSLYELSFESLTYQ 517 Query: 530 EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKF 589 ++ F R+ + I D+ EA+L + + ++ + L + Sbjct: 518 HKAEVLDFICARVDKMMGSA-IPKDIREAVLASSSFVVPELLARAEALAAASQLDTYKPA 576 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + S R+F + + I + E+ L + + + Sbjct: 577 VESLSRVFNLAKKAVDA-----VLIDASLFENDYERALAQAVDSL-------VLSGSAKE 624 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + ++ I+ FFD +V +D +R NRL+LL + + + ++ Sbjct: 625 QLAQVFALSPVIDDFFDHTMVMTEDEAIRCNRLALLAELVKKVETIAAFDRL 676 >gi|33865630|ref|NP_897189.1| putative glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8102] gi|33632800|emb|CAE07611.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8102] Length = 720 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 187/755 (24%), Positives = 334/755 (44%), Gaps = 94/755 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA +A + L + L + + +++++ TP RL + + GL+ Sbjct: 3 STFLLEIGTEELPADFARQALDQLQDRVGRDLLDSRLDHKSVQVLGTPRRLVVRVHGLAD 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ E++ GP + G A GF + G+ S +++ P KG+ A +R Sbjct: 63 RQPDLEEDQKGPPIAQAFKDGVPGPAAIGFSKRCGVDP-SQLEVRNTP-KGECVFASVRT 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + D+L+ ++P I + + MRW T + RP++ +L + + + Sbjct: 121 EGQNSVDLLQELIPAWINGLQGRRFMRWGTGSQ-----RFSRPIRWLLALKGVD-----L 170 Query: 176 IDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 I +++ + + GHR H P+ + + + Y L A V++D + R I + Sbjct: 171 IPVEIPGADPPVRSDRFSRGHRLHGDQPLPIDTAEDYDDTLAAAGVIVDRQQRAALIRSQ 230 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A + + L EE++ LVE ++ GS +++L LP E+I ++ +Q+ Sbjct: 231 LDASADQLNGLPDCPESLFEELVDLVESPRLLQGSIAERFLSLPPEVIITVMQAHQRYVP 290 Query: 292 TR-----------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 + VL F+LV N + A I +GN RV+AARL DA F D Sbjct: 291 LKVPEVTPDPLQLEATVVLQRDFLLVGNGLEA-ADALITRGNERVLAARLADAEFFLSVD 349 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + +P R LD V F +G+ +R RI +++ Sbjct: 350 RR--------------------QPSSARREALDR--VTFAEGLGSLLDRCQRIERTARQL 387 Query: 401 AQLIDADV---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ D RA K DL +++V EFPELQG +G +Y + + E A+ E Sbjct: 388 VDQLNLDAHQGEAAIRAAHFCKHDLVSQMVGEFPELQGLMGGKYLLEEGEPTEVALAVVE 447 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H PRG + +P++ V+LA++L+ L++ +A E+PSGS DPYALRRA G+++I+ Sbjct: 448 HYLPRGAGDQLPSSDAGAVVALAERLELLLSIFAKGERPSGSSDPYALRRAGNGLLQIVW 507 Query: 518 ENKIDIPLSQFIE--------------------DQNLILFFHDRLKLYLHDRDIRHDLIE 557 + + LS+F+ Q+L R+ L D DL++ Sbjct: 508 DRGWRLDLSRFLGSAVEDWAALFPEFAIDSSALHQDLCQLLRQRIVSQLEDEGFVPDLVQ 567 Query: 558 AILRPEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 A+ + + + + + LN S + +R ++ + +++ Sbjct: 568 AVSAESVATERLLADPMDVRERLDLLNALRQSKALPGLMAVVQRAARLAEKGDLVETDLT 627 Query: 612 LE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---D 666 + +SP+ +E +Y V+ + +RY ++ + L +E FF D Sbjct: 628 VSAVVSPERFESPSETAMYEVLVQL----EPLASGRRYRELAEALVQATPVLEAFFDGDD 683 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+V DD E+R NRL+LL ++N ++ I Sbjct: 684 SVMVMADDPELRRNRLNLLGVLRNQAGVLARFDLI 718 >gi|257784497|ref|YP_003179714.1| glycyl-tRNA synthetase, beta subunit [Atopobium parvulum DSM 20469] gi|257473004|gb|ACV51123.1| glycyl-tRNA synthetase, beta subunit [Atopobium parvulum DSM 20469] Length = 695 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 207/726 (28%), Positives = 332/726 (45%), Gaps = 71/726 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI SEE+P+ KA + +++ LK+ G+ + ++ TP RL Y+K ++ Sbjct: 6 DFLFEIGSEEMPSAPLQKAIAQFNKLVVSGLKDSGLSFGEVKILSTPRRLTAYVKDVAEA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E E + GP+ G KA +GF R G+ + + D + A L Sbjct: 66 TEEISEVKRGPKAEIAFDAEGNPTKAAEGFARKCGVNANA-LTRRVDTDGHEYVFAELNI 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L + I + WP+S RW + H ++RP++ + + +E I Sbjct: 125 PSVPATKILSELATSWISALDWPRSQRWGSFHE-----RYVRPVRWLCVLFGSE-----I 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ N T GHR P +V S Y + L++A VLL E R++ IL + Sbjct: 175 VPVTYADVTSSNTTQGHRVLGPGCHEVASPADYEQVLKDAGVLL-QEQRKDVILAGIKEV 233 Query: 236 -ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A+ G + + + EE+I L EW QV +G+FDK++L +P E+I ++ +NQ+ F Sbjct: 234 EAARPGSHVDMPEKVFEEVINLTEWPQVLVGTFDKEFLNVPSEIITESMLSNQRYFPIYD 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 EG L FI+VSN + ++ GN RVV ARL+DA F++ D Sbjct: 294 AEGKLTREFIVVSNADPT-CAERVIDGNERVVRARLDDAKFFFEED-------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA---QLIDADVALV 411 L LD+ RL+ VVF K+GT ++ R+ L +IA L Sbjct: 339 ------LKHSLDEFAQRLET--VVFQEKLGTVLQKTQRMEALAAEIALDETSSKEKAELA 390 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA L+KADL ++ V EF QG +G YA E AI EH +PR + +P+ Sbjct: 391 ARAAHLAKADLVSQAVVEFTSQQGVMGGYYAEAAGEKSDVVAAIREHYRPRFAGDELPSG 450 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI-----------ILENK 520 +I V++ADKLDT+ +AINE P+GS DPYA+RRA +G+I + ++ + Sbjct: 451 QIGRFVAIADKLDTICGIFAINEPPTGSSDPYAVRRAAIGVIALVRSTSNLNLKKLIASS 510 Query: 521 IDIPLSQFIEDQNLI-----LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 +++ Q + + +F RL D I D IEA+ + + + Sbjct: 511 LELYRQQGLVVDESVQSQIEQYFIGRLASIAKDEKISADAIEAVSAIGVIDPDEFLLRAR 570 Query: 576 HLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L+E + E + R + + + E+ L E + A + Sbjct: 571 ALDEARQNEPELFEDLATAYARAAHL------SDTSLGTEVDTALLTEP-ELSVLAACEE 623 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + ++ Y L + EPI+IFFD+VLV ++ VR NRL LL + Sbjct: 624 GQKQVASALAGADYAAAVSALSQLREPIDIFFDKVLVMDENDTVRRNRLRLLNKFSQVFS 683 Query: 694 IVINVQ 699 V ++ Sbjct: 684 NVADIS 689 >gi|238651094|ref|YP_002916952.1| glycyl-tRNA synthetase subunit beta [Rickettsia peacockii str. Rustic] gi|259511931|sp|C4K2V3|SYGB_RICPU RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|238625192|gb|ACR47898.1| glycyl-tRNA synthetase subunit beta [Rickettsia peacockii str. Rustic] Length = 664 Score = 624 bits (1611), Expect = e-176, Method: Composition-based stats. Identities = 226/702 (32%), Positives = 347/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRITLHATHLPKITLPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIEAPETAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFNGE-----ILPMQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERAKREAIIKTGLLELANSHELIIKEDNRLVEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 ++GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 240 VVGLSEFPIVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D +K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFCKQDI--------------------AKTLESRLGQL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 339 EA--VTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVWEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI++H KP+G +NVP+ ++LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNAEIAAAIKDHYKPQGLSDNVPSGNA-ALLALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I + FF Sbjct: 452 GETPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR I Sbjct: 512 ERAKFYFKN-DYDIALINAVLDL---NLIDTNFKLDELKEFLIEDAGKQLLNAYKRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + +++I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----GDQKITGLVDASLFSTQPEKELFEVIQKISPEIIDSIADKDYKKALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD +LVN D ++ NRLSLLQ I + V ++ Sbjct: 623 PITSFFDNILVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 664 >gi|284107196|ref|ZP_06386337.1| Glycyl-tRNA synthetase beta subunit [Candidatus Poribacteria sp. WGA-A3] gi|283829943|gb|EFC34222.1| Glycyl-tRNA synthetase beta subunit [Candidatus Poribacteria sp. WGA-A3] Length = 698 Score = 624 bits (1611), Expect = e-176, Method: Composition-based stats. Identities = 195/732 (26%), Positives = 328/732 (44%), Gaps = 86/732 (11%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRV- 75 M A L ++ G L + + + +R + TP R+ + + GL+ ++E LGP Sbjct: 1 MVQPAMTQLGELIDGFLADHRLSHDQIRTFGTPRRVAVLVTGLAAKQTPAVQEALGPSKS 60 Query: 76 ------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVP 129 G KA GF +S G+ ++ KG AV R+ VL +P Sbjct: 61 VAFDAQGHPTKAAQGFAKSQGVDVGELET--RETPKGVYLCAVKREKGLPASQVLTEHLP 118 Query: 130 VAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNIT 189 +Q++ +PK+MRW+ S + RP++ + + + + D + G + Sbjct: 119 GLLQQLTFPKTMRWNA-----SGIRYPRPIRWLAAV-----VGSRPLSFDFAGVRSGGHS 168 Query: 190 YGHRFHAPHP-------IKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 +GHRF + I+++ + Y L V +DP RR A+ +LA +V Sbjct: 169 WGHRFLSGGKAGAASRGIRIRRPELYEAALARGGVTVDPARRREALAGQLKQLARSVKGR 228 Query: 243 L--VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + ++LL++ + +E V GSFD+ YL +P+E++ +++ +Q F R+G L Sbjct: 229 VYQANHEELLDQAVFSLECPNVVCGSFDRMYLAVPQEVLIASMEEHQGFFSVVNRKGELF 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F +N++ + I GN RV+AARL DA +F+ D+ Sbjct: 289 PRFFAPTNMELRNM-ELIRVGNERVLAARLADARYFFDEDRKV----------------- 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVDRAIVLS 418 L R+ L VVFH ++G+ E+ R L +A RA LS Sbjct: 331 ---KLADRVQEL--HGVVFHKRLGSLYEKTQRTIDLVGALADAAGIPEVKESCQRAAFLS 385 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL T +V EFP LQG +G+ YA E++ C AI E+ +PR P + +P I ++ Sbjct: 386 KADLVTGMVGEFPTLQGVMGEHYAAHDGESVEVCQAIGEYYRPRTPDDAIPETTIGRLLA 445 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-- 536 LAD+L+TL F+ PSGS+DP+ LRR G+IRI++E ++I L+ + ++ Sbjct: 446 LADRLETLAAFFYAGMVPSGSEDPFGLRRGAFGVIRIVIEAGLNINLADILSKAERLIVE 505 Query: 537 -----------------------FFHDRLKLYLHD-RDIRHDLIEAILRPEND---NLLT 569 F +RL+ Y R D+++++L + +L Sbjct: 506 QGVKAGGHPSASLRAGSGPPPRKFLEERLRYYGRTVAGYREDVMDSVLARADGADCDLRD 565 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + + L S E ++ KR +I+ +K + + L E+ L+ Sbjct: 566 LFLRMDALQAITSQQDFESLIVGFKRAHRIV----EKEGWTARTVEASLLTHPTEQTLHQ 621 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + + S+D YH L + PI+ FFD VLVN + EVR NRLSLL+ + Sbjct: 622 AMDTATRGVGHSLDVHDYHGALKYLIGLKSPIDEFFDGVLVNAPEPEVRANRLSLLRQVD 681 Query: 690 NIILIVINVQKI 701 ++ ++ +I Sbjct: 682 DLFATFGDLSQI 693 >gi|157964999|ref|YP_001499823.1| glycyl-tRNA synthetase subunit beta [Rickettsia massiliae MTU5] gi|157844775|gb|ABV85276.1| Glycyl-tRNA synthetase beta chain [Rickettsia massiliae MTU5] Length = 675 Score = 624 bits (1611), Expect = e-176, Method: Composition-based stats. Identities = 226/702 (32%), Positives = 343/702 (48%), Gaps = 62/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA M A E I + +E + + ++ + P R+ L+ L + K EE G Sbjct: 23 IPAFMHKNAEEGYLNIFTKIFEENEI-FAKVQVFVGPRRITLHATHLPKITLPKEEEIKG 81 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF ++ + + K Y + + +R I+++L I+ AI Sbjct: 82 PNIEAPEAAINGFCKAHNVSKLELST--KLISNQLYYFFIKKTEEREIKEILPEIIIEAI 139 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ + + NITYGH Sbjct: 140 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPVQFGHLTANNITYGH 189 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I LAS+ L + ED L+EE Sbjct: 190 RLTDNKKLEVTDFEDYRNKLLENHVILERTKRETIIKTGLLELASSHDLIIKEDNRLVEE 249 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + + Sbjct: 250 VAGLSEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFT 309 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F K+D +K L+ R+ +L Sbjct: 310 NA-ELVIQGNEKVLSARLSDALYFCKQDI--------------------AKTLESRLGQL 348 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ RI + IA + + A L K+DL +E+V EFP+ Sbjct: 349 EA--VTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVGEFPD 402 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N I +H KP+G +NVP+ ++LADKLD+L+ Sbjct: 403 LQGIMGYYYAKHEGLNAEIAAVIRDHYKPQGLSDNVPSGNA-ALLALADKLDSLVGLMIA 461 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRIILENK+++ + I + FF Sbjct: 462 GEAPTGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFE 521 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR I Sbjct: 522 ERAKFYFKN-DYDIALINAVLDL---NLVDTNFKLDALKEFLIEDAGKQLLNAYKRASNI 577 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + ++K I+ + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 578 IIGDQK----ITGLVDASLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLT 633 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 634 PITSFFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 675 >gi|328950890|ref|YP_004368225.1| glycyl-tRNA synthetase, beta subunit [Marinithermus hydrothermalis DSM 14884] gi|328451214|gb|AEB12115.1| glycyl-tRNA synthetase, beta subunit [Marinithermus hydrothermalis DSM 14884] Length = 698 Score = 624 bits (1611), Expect = e-176, Method: Composition-based stats. Identities = 207/736 (28%), Positives = 336/736 (45%), Gaps = 88/736 (11%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L EI +EE+PA + E L L + Y+ + Y TP RL L + GL+ H Sbjct: 2 DLLFEIGTEELPAWYVTEGLEALKKRTAERLLAARLEYEELTGYATPRRLALVVTGLAAH 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 EER GP G KA +GF R G++ + + G VY A + Sbjct: 62 QARLEEERRGPPARVAFQDGKPTKAAEGFARKNGVRVEDLYE-----RDGYVY-ARVVDE 115 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL ++ +++P PK MRW P +IRP++ ++ +L E ++ Sbjct: 116 GRPAREVLPKLLAEVARELPAPKPMRWGHGEGP-----FIRPVRWLVALLDGE-----VL 165 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L++ + G T GHRF P + +Q Y+ L EA V++DPE RR I+ +A LA Sbjct: 166 PLEVFGVRAGRETRGHRFLHPGLLALQDAASYVTALHEARVVVDPEVRRERIITEAATLA 225 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 A GLE+V KDLLEE+ GLVEW MG FD++YL LP+E++ + +Q+ F R ++ Sbjct: 226 LAEGLEVVLPKDLLEEVTGLVEWPVGVMGRFDERYLELPDEVLAEVMIVHQRFFPVRGKD 285 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L N FI ++N D + +G V+ RL DAL FW+ D Sbjct: 286 GRLTNRFIGIANHLP-DHLETVRRGYEGVLEGRLADALFFWRAD---------------- 328 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L PL + ARL + FH +GT ++ R+R + + + + AD+ ++ A Sbjct: 329 ----LKTPLAEHRARLK--GINFHKGLGTMWDKTERVRRAAEALGEAVGADLGVLREAAG 382 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L +ADL T++V EFPEL+G + + YA Q + A+EE ++P+G +P + Sbjct: 383 LLRADLGTQMVYEFPELEGIMARAYAERQGVDPRVARALEEAVRPQGGSGALPESTEGAL 442 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL 536 +S+ DK DTL+ F+ + + PSGS DP+ LRR +G++R++ D+PL + +E Sbjct: 443 LSVLDKADTLVGFFQLGKTPSGSADPFGLRRVAVGLVRVLGAMGWDLPLGKVLEAAAESY 502 Query: 537 -----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 F +RL+ L + + + A + ++ + + + Sbjct: 503 RAWGLEVEEAALRTAEGFVLERLEGLLVEAGLPVLAVRA--AEVAPTVYGVMLRARLVAQ 560 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + L KR + + P E LYAV+ + Sbjct: 561 LAGEPEFAGLQLLYKRAANLAREASGVH-----APDPALFQTPEEAALYAVLPRVEAGVA 615 Query: 640 ESMDHKR-------------------YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 ++ + ++ + ++ F D VLV VDD VR+N Sbjct: 616 RLLELGTELMPPWDPAAPLPRVGLEPLAAPLREVVALKDALDRFLDNVLVMVDDPAVREN 675 Query: 681 RLSLLQYIKNIILIVI 696 RL+LL+ +++ + + Sbjct: 676 RLALLRRVRDAVRRLG 691 >gi|322436213|ref|YP_004218425.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9] gi|321163940|gb|ADW69645.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9] Length = 693 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 202/723 (27%), Positives = 339/723 (46%), Gaps = 54/723 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKG 58 M DFL EI EE+PARM +A +L +GLL+ E ++ + Y TP RL + +KG Sbjct: 1 MADFLFEIGLEEVPARMIAQAEAELLKRTVGLLERERLVAGAVEAKSYSTPRRLAVVVKG 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE LGP G A F + G++ +S ++ + KG+ A Sbjct: 61 VLARQEDVSEEVLGPATKIAFKDGQPGPAAVAFAKKNGVE-VSALRVVTNA-KGEYVAAT 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K R VL +P I + W K+M W ++RP++ ++ +L Sbjct: 119 SVKAGRSAAAVLAEELPKEIAGIYWAKNMYWRAGR----PERFVRPVRWLVALL-----G 169 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++I+ + G +TYGHR + Y+ +L +A V++D E RR+ I Sbjct: 170 DEIVPVSFGGYEAGRVTYGHRVLFGDAAIAVTPASYVEELAKASVMVDVEGRRHVIRKAL 229 Query: 233 HRLAS-AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 ++ A G ED L++++ + EW V +G F+K+YL LPEE++ ++ +Q F Sbjct: 230 DKVCRTAEGTRWREDHGLVDKMTHMTEWPSVILGGFEKEYLALPEEVLVTVMRDHQNYFA 289 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + +G LA F+ V N A + G A+++ GN RV+ AR DA FW+ DQ Sbjct: 290 VESADGKLAPHFLAVLNTVADETGQAVIRHGNERVLRARFNDARFFWEFDQRV------- 342 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVA 409 PL++R+A L+ +V F +G+ + R+ L +A + D+ Sbjct: 343 -------------PLEERVALLE--NVTFQKDLGSYAAKSVRVGALALSLAATVPGVDLE 387 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + A L+K DL TE+V+EF ELQG++G YA Q + C+AI + +P + +P Sbjct: 388 ALKAAARLAKTDLTTELVKEFTELQGEVGGLYAEAQGVAQAACNAIYDQYRPVSTEDRIP 447 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-- 527 +++ADK DT+ + + +P+GSKDP+ALRRA GI++I+ E + + Q Sbjct: 448 RTVEGQLLAMADKADTIAGMFGLGLEPTGSKDPFALRRAANGIVKILGEGATGLGIGQVV 507 Query: 528 -------FIEDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + + L +FF +RL+ YL + + +D++ A+L D++ V + + Sbjct: 508 RAAVGDNLVLVRKLEVFFAERLEFYLREAKGQAYDVVAAVLGAGADDVRDAVARAEAVTA 567 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 S + KR+ ILA +K + L AE L ++ + Sbjct: 568 VRGSEDFAAVSAAFKRMKNILAQAAEKGIAPGTAVDISLLKDGAELALAEKAAEVKPEVA 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 Y +L+ ++ + FF+ V+V D VR NRL+LL + + Sbjct: 628 ALRGAHEYRGALELIATLRPQVNAFFEAVMVMDPDEAVRANRLALLGKVLGDFGGIAEFS 687 Query: 700 KIV 702 +IV Sbjct: 688 EIV 690 >gi|182679089|ref|YP_001833235.1| glycyl-tRNA synthetase, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182634972|gb|ACB95746.1| glycyl-tRNA synthetase, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 821 Score = 624 bits (1610), Expect = e-176, Method: Composition-based stats. Identities = 254/528 (48%), Positives = 347/528 (65%), Gaps = 23/528 (4%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MPD LLE++SEEIPARMQ +AAEDL ++ G L E+G+ ++ + TP RL L++ GL Sbjct: 1 MPDLLLELFSEEIPARMQAQAAEDLKRLVTGALSEQGLSFEGAASFATPRRLALHVAGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + EE+ GP+VGA + A+ GFL+S GL ++ ++KD KKGD Y+AV+ + R Sbjct: 61 IRQADVREEKKGPKVGAPEAALQGFLKSAGLASLDQAIVQKDAKKGDFYVAVIERAGRPA 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 DVL I+P I+ PWPKSMRW + A W+RPL +IL E + ++ + Sbjct: 121 LDVLADILPAVIKSFPWPKSMRWGRASARSDALRWVRPLHAILATFGPETEEPDVVPFSV 180 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + I G T+GHRF AP PIK++ D Y+ LE+A V+LD E RR+ IL+DA L+ A G Sbjct: 181 EGIEAGQTTFGHRFLAPEPIKIRRFDDYLPALEKAKVVLDAERRRDIILHDARDLSFAQG 240 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR-EGVL 299 L+L+EDK LLEE+ GLVEW V + FD ++L +P E+IR TI+ NQKCFV R G L Sbjct: 241 LDLIEDKALLEEVAGLVEWPVVLLAEFDPQFLEIPPEVIRATIRANQKCFVLRDPVSGRL 300 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 A+ F+LV+NI+ASDGG AIV GN+RVV ARL DA FW+ D Sbjct: 301 AHKFLLVANIEASDGGKAIVAGNARVVRARLSDAKFFWETD------------------- 341 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 L L+ R+ +L+ +VFH K+GTQGERV R+ + + ++ ++ AD A RA L+K Sbjct: 342 -LQTRLEARLPKLET--IVFHEKLGTQGERVQRLVLNARDLSPIVGADQAEAARAAELAK 398 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 DL +E+V EFPELQG +G+ YA Q E+ + AIEEH KP+GP + VP +SI V+L Sbjct: 399 TDLVSEMVGEFPELQGLMGRYYAQKQGESSNVAAAIEEHYKPQGPNDLVPNAPVSIAVAL 458 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 ADKLD+L+ F+AI+E+PSGSKDPYALRRA LG+I +ILENK+ +PL + Sbjct: 459 ADKLDSLVGFFAIDERPSGSKDPYALRRAALGVIALILENKLRLPLRR 506 Score = 170 bits (431), Expect = 8e-40, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 16/186 (8%) Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILR-PENDNLLTIVDLIKHLNEFFSSAKGEKFLL 591 LI FF DRLK+YL +R R+DLI+A+ P D+LL IV ++ L F + +G+ L Sbjct: 635 QLIAFFGDRLKVYLRERGARYDLIDAVFALPGQDDLLLIVARVEALASFLDTEEGKNLLA 694 Query: 592 SAKRIFQILAIEEKKNR--EISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR--- 646 +R IL EEKK+ + P L E+ L+ I + + Sbjct: 695 GYRRAANILKAEEKKDGVGAFNAPADPGLLREGQERALWERIRLMREEAETHLYKAEEEI 754 Query: 647 ----------YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 + + + L S+ P++ FFD V VN + E+R NRL LL ++ + + Sbjct: 755 GRKTFEGPTPFEKAMENLASLRAPVDAFFDHVTVNASEPELRVNRLQLLNELRQAVHRIA 814 Query: 697 NVQKIV 702 + KI Sbjct: 815 DFSKIA 820 >gi|226939677|ref|YP_002794750.1| glycyl-tRNA synthetase subunit beta [Laribacter hongkongensis HLHK9] gi|226714603|gb|ACO73741.1| GlyS [Laribacter hongkongensis HLHK9] Length = 692 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 210/727 (28%), Positives = 353/727 (48%), Gaps = 61/727 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKG 58 M L+E+++EE+P + + E + ++ L G++ N + +P RL + + Sbjct: 1 MTTLLVELFTEELPPKALKRLGESFADVIRAELARAGLLEDNAVATAWASPRRLAVSIDH 60 Query: 59 LSPHSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP-KKGDVYL 110 + +P++ + E++ P G A+ L + G+ + Q ++ P K + + Sbjct: 61 VRATAPDRDVTEKIMPVAVALAADGQPSPALRKKLEARGIALDAVAQFERRPDGKHETFF 120 Query: 111 AVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAED 170 + D L V +++K+P PK M W + +++RP+ ++ + +E Sbjct: 121 YTYTAAGARLADELPRAVQESVRKLPIPKVMHWGDSD-----VTFVRPVHKLVALYGSE- 174 Query: 171 AKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLE-EAMVLLDPECRRNAIL 229 IID ++ + IT GHRF + I + + Y R LE E V+ + RR I Sbjct: 175 ----IIDCEVLGLFSDRITGGHRFLSEGDISLPDAESYARVLEQEGRVVAGFDDRRERIR 230 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A + + D LL+E+ LVEW V F+ ++L +P+E + LT++ NQK Sbjct: 231 AGLDAAARRLNATIAADDALLDEVTALVEWPVVLEAGFEAEFLKVPQECLILTMQQNQKY 290 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 F G L N F+LVSN++ +D + I++GN RV+ ARL DA F+++DQ Sbjct: 291 FPLLDANGRLMNRFLLVSNLETADP-SHIIKGNERVLRARLSDAKFFFEQDQK------- 342 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 + L+ R+ RL DVV+H ++G+Q ER R+ VL IA+ + AD A Sbjct: 343 -------------QKLEARIPRL--ADVVYHNQLGSQLERTERLAVLAGDIARALGADAA 387 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + +RA L+KADL T++V EFPELQG +G+ YA++ E DAIE H PR +++P Sbjct: 388 IAERAARLAKADLLTDMVGEFPELQGVMGRYYALIDGELPIVADAIEGHYHPRFAGDSLP 447 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDI------ 523 I+ V+LADKL+ L W I P+G KDP+ LRR LG++R+++ ++D+ Sbjct: 448 DGDIATAVALADKLEMLTGIWGIGLVPTGDKDPFGLRRQALGVMRMLMNARLDLKALLER 507 Query: 524 -----PLSQFIEDQNLIL--FFHDRLKLYLH-DRDIRHDLIEAILRPENDNLLTIVDLIK 575 P + D L F +RLK L D R D ++A+L E + + ++ Sbjct: 508 AVATFPAGKLAADTAPALYVFMLERLKNLLTADAATRADEVDAVLALEPGHFDEVPAVLA 567 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 + F + + + KR+ IL +K E+ + L AE L+ I Sbjct: 568 AVAAFRALPEAAALAAANKRVKNIL---KKVEGELPTGVDAALLTEAAETELWQSIDAVL 624 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ++ + + Y L + P++ FFD V+V DD VR NRL+LL + + V Sbjct: 625 PTVEAAFAARDYATALSRLAVLKVPVDAFFDGVMVMADDAAVRANRLALLARLAGLFNRV 684 Query: 696 INVQKIV 702 ++ + Sbjct: 685 ADISLLA 691 >gi|210633032|ref|ZP_03297632.1| hypothetical protein COLSTE_01540 [Collinsella stercoris DSM 13279] gi|210159319|gb|EEA90290.1| hypothetical protein COLSTE_01540 [Collinsella stercoris DSM 13279] Length = 696 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 185/731 (25%), Positives = 323/731 (44%), Gaps = 73/731 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+P+ + A + L +++ L E G+ + ++R +P RL + ++ Sbjct: 6 DFLFEIGVEEMPSAPLNNAVKQLKVLVAKGLDEAGLSHGDVRIVSSPRRLAALVSDVAEA 65 Query: 63 SPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G KA +GF R GL + ++D + A Sbjct: 66 TEEIHSVLRGPSAKIAFDADGNPTKAAEGFARKNGLTAAELIR-REDTDGTEYVFAEQNT 124 Query: 116 PKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P +L + I ++ WP +S RW + +++RP++ I C+ + Sbjct: 125 PSEPAAPMLARMAEAVIAQIEWPNYRSQRWGAERA-----TFVRPIRWICCLF-----GD 174 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++ ++ G T GHR +P +V Y + LE A V L E R + I Sbjct: 175 DVVEVRYADVVSGRTTRGHRVLSPGEHEVACPAVYEQVLESAHV-LSAERRESVIREGIA 233 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 ++ + +G+ + + +E++ L EW V +G FD+++L +P E+I ++ +NQ+ F T Sbjct: 234 QVEAELGVHVDTPAKVFDEVVNLCEWPTVLVGHFDEEFLAVPSEIICESMLSNQRYFPTY 293 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L F++VSN + ++ GN RVV ARL DA F+ D Sbjct: 294 DAQGNLTRAFVVVSNADPA-VSETVIDGNERVVRARLYDAKFFYDED------------- 339 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ--LIDADVA-L 410 L L++ +RL V F K+GT ++ R+ L IA+ I AD A Sbjct: 340 -------LKIDLEEFRSRL--AKVGFQKKLGTVLQKSERMEDLALAIAREARIGADAASD 390 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA L+KADL + V EF QG +G YA E AI +H +PR + +P Sbjct: 391 AQRAAHLAKADLVSSAVVEFTSQQGVMGGYYAAAAGEAPEVAAAIRDHYRPRFAGDALPE 450 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN----------- 519 V++ADKLDT+ +AI E P+GSKDP+ALRR+ +G++ I+ + Sbjct: 451 GTAGCIVAVADKLDTIAGMFAIGEPPTGSKDPFALRRSAIGVLNILRDRLGCGYEALVDA 510 Query: 520 ------KIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + + + ++ F R++ D I D + A+ +L Sbjct: 511 ALDAYAEQGLEFDKAEVAASVCAFIKGRMEQMARDEKIAPDTVAAVSAGSVTTPAHYFEL 570 Query: 574 IKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L ++ + + + R + + + E+ L +AE+ L I Sbjct: 571 AHALEHARANDRAAFDNLATAYARAAHL------ADASVGCEVDEALL-GDAERVLLETI 623 Query: 632 SDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNI 691 + ++ + + + L ++ EPI+ FFD+V+V +D +R NRL+LL + Sbjct: 624 DAAEASVASALSAQDFPGVISALAALREPIDAFFDEVMVMDEDERLRTNRLALLNRFAAV 683 Query: 692 ILIVINVQKIV 702 + ++ + Sbjct: 684 FSGIADLGAMA 694 >gi|3861374|emb|CAA15273.1| GLYCYL-TRNA SYNTHETASE BETA CHAIN (glyS) [Rickettsia prowazekii] Length = 648 Score = 622 bits (1606), Expect = e-176, Method: Composition-based stats. Identities = 226/698 (32%), Positives = 343/698 (49%), Gaps = 63/698 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ A E I + +E + + ++ + P R+ L+ + K EE GP + Sbjct: 1 MQKNAEEGYLKIFTKIFEENEI-FAKVQVFAGPRRITLHATHVPKVILPKEEEIKGPSIE 59 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A + AI+GF ++ + + D K K Y V + +R +++L I+ AI K Sbjct: 60 APEIAINGFCKAHNVSKL-DLSTKLRNNK-LYYFFVKKTKERETKEILPKIIIDAINKYS 117 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 W KSM W WIRPL++ILCI E I+ L + NITYGHR Sbjct: 118 WTKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLRFGHLSTNNITYGHRLTN 167 Query: 197 PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGL 256 +++ ++Y L E V+L+ R I LA+A L + +D L+EE+ GL Sbjct: 168 NKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDVCLIEEVTGL 227 Query: 257 VEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGA 316 E+ V +G +K+L LPEE+I ++T+QK F + G A F+ V N + + Sbjct: 228 SEFPIVLLGKIPQKFLELPEEVIVSVMRTHQKYFCLFDKNGSFAPYFLFVINGRFVN-TE 286 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 I+QGN +V++ARL DAL+F+K D +K L+ R+ +L Sbjct: 287 LIIQGNEKVLSARLADALYFYKNDI--------------------AKTLESRLDKLK--S 324 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 V+FH K+G+ E+V RI + + IA D + A L K+DL +++V EFP+LQG Sbjct: 325 VIFHTKLGSLKEKVDRITDICRYIAP----DNIDLIMAAKLCKSDLVSDMVGEFPDLQGI 380 Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + E P Sbjct: 381 MGYYYAKHEELNEEVAKAIRDHYKPQGLNDNVPSGN-ATLLALADKLDSLVGLIIVGETP 439 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFHDRLK 543 +GS DPYALRR LGIIRII+ENK++I I + FF +R K Sbjct: 440 NGSGDPYALRRQALGIIRIIIENKLEINFINLISFSVSLYKVSSNSHLDSVISFFEERAK 499 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 Y + D LI A+L NL+ + L EF G++ L + KR+ I+ Sbjct: 500 FYFKN-DYDITLINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNIM--- 552 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 N++I+ + + EK L+ VI I + +K Y + +LL S+ +PI Sbjct: 553 --GNQKITGLVDASLFSTQYEKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLKPITS 610 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD VLVN D ++ NRLSLLQ + V ++ Sbjct: 611 FFDNVLVNDSDPKIAQNRLSLLQNTCEVFDKVAKFCRL 648 >gi|165933877|ref|YP_001650666.1| glycyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. Iowa] gi|165908964|gb|ABY73260.1| glycyl-tRNA synthetase beta chain [Rickettsia rickettsii str. Iowa] Length = 648 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 225/698 (32%), Positives = 345/698 (49%), Gaps = 63/698 (9%) Query: 17 MQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGPRVG 76 MQ A E I + +E + + ++ + P R+ L+ L + K EE GP + Sbjct: 1 MQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRITLHATHLPKITLPKEEEIKGPSIE 59 Query: 77 AGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVP 136 A + AI+GF ++ + + K Y V + +R I+++L I+ AI K Sbjct: 60 APEAAINGFCKAHNVSKLELPT--KLISNQLYYFFVKKTEEREIKEILPEIIIEAINKYS 117 Query: 137 WPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRFHA 196 W KSM W WIRPL++ILCI E I+ + + NITYGHR Sbjct: 118 WAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----ILPMQFGHLTANNITYGHRLTD 167 Query: 197 PHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEIIGL 256 ++V + Y L E V+L+ R I LA++ L + ED L+EE++GL Sbjct: 168 NKKLEVTDFEDYRNKLLENHVILERAKREEIIKTGLLELANSHELIIKEDNRLVEEVVGL 227 Query: 257 VEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGA 316 E+ V +G +K+L LP+E++ +++T+QK F + G F+ VSN + ++ Sbjct: 228 SEFPVVLLGKIPQKFLELPKEVLISSMRTHQKYFCLFDKTGNFTPYFLFVSNGRFTNA-E 286 Query: 317 AIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLD 376 ++QGN +V++ARL DAL+F K+D +K L+ R+ +L+ Sbjct: 287 LVIQGNEKVLSARLSDALYFCKQDI--------------------AKTLESRLGQLEA-- 324 Query: 377 VVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGK 436 V FHAK+G E++ RI + IA + + A L K+DL +E+VREFP+LQG Sbjct: 325 VTFHAKLGNLREKIERITDICNYIAP----NNKDLITAARLCKSDLVSEMVREFPDLQGI 380 Query: 437 IGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKP 496 +G YA + N AI++H KP+G +NVP+ ++LADKLD+L+ E P Sbjct: 381 MGYYYAKHEGLNAEIAAAIKDHYKPQGLSDNVPSGNA-ALLALADKLDSLVGLMIAGETP 439 Query: 497 SGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFHDRLK 543 +GS DPYALRR LGIIRIILENK+++ + I + FF +R K Sbjct: 440 TGSGDPYALRRQALGIIRIILENKLELNFNDLINFSINLYKDSSDENKNLIISFFEERAK 499 Query: 544 LYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 Y + D LI A+L NL+ + L EF G++ L + KR I+ Sbjct: 500 FYFKN-DYDIALINAVLDL---NLVDTNFKLDELKEFLIEDAGKQLLNAYKRASNII--- 552 Query: 604 EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEI 663 +++I+ + + EK L+ VI I +S+ K Y + +LL S+ PI Sbjct: 553 --GDQKITGLVDVSLFSTQPEKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLTPITS 610 Query: 664 FFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD VLVN D ++ NRLSLLQ I + V ++ Sbjct: 611 FFDNVLVNDSDPKIAQNRLSLLQNICELFDKVAKFNRL 648 >gi|118475036|ref|YP_892001.1| glycyl-tRNA synthetase subunit beta [Campylobacter fetus subsp. fetus 82-40] gi|118414262|gb|ABK82682.1| glycyl-tRNA synthetase, beta subunit [Campylobacter fetus subsp. fetus 82-40] Length = 671 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 188/720 (26%), Positives = 330/720 (45%), Gaps = 75/720 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA + ++ +L E G+ +TP R+ + + + Sbjct: 3 LLIEIGVEELPAIPFLRELNNIKPKWKQVLDEYGLD-SKFNLEYTPRRIVIN-GDIPELT 60 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 P+ E +G G A GF + G+ + K+ K +V Sbjct: 61 PDLEVENIGAPKSVALQDGKWNAAALGFAKKCGISQ-DELGFKEIKGK-EVLYHKSVIKG 118 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 +L+ D+L ++ I + + KSMRW + +IRP++S++ IL EK +D Sbjct: 119 KLVSDLLPAMIEKFILSLNFGKSMRWGNGE-----YEFIRPIRSLISIL-----GEKSLD 168 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 ++ + Y HR I S+D Y + + ++L R+ IL++ + + Sbjct: 169 FEIFGVKSKKAFYPHRNFGYDMIDFSSIDEYFELVRKNGIILSATQRKEKILDEFKTIET 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 L++ D DLL+E++ + E+ +GSF+K++L +P E+I ++K NQ+ F +G Sbjct: 229 KNNLKIELDFDLLDEVVAITEYPTALLGSFEKEFLEVPSEVIITSMKENQRYFPLHNADG 288 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L+N F++VSN D I++GN +V+ ARL DA FW D Sbjct: 289 KLSNHFVVVSNAITDDHN-LIIRGNEKVLRARLSDAKFFWHSD----------------- 330 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---------V 408 L + + ++ + ++G+ ++ R R + + +A + D D Sbjct: 331 -------LASEFSSEKLKNITYLNELGSMYDKELRERQIARILASIYDKDLRYEFGGDYA 383 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 +DRA++LSKADL T +V EF LQG +G YA ++EN AI+E P L Sbjct: 384 DELDRAVMLSKADLTTNMVYEFTNLQGVMGGYYAAYRDENPFIIGAIKEQYLPNANL--Y 441 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P S V++++KLDTL+ ++I + PSG+KDPYALRRA GII+I+L I+ L Sbjct: 442 PKTLFSSLVAISNKLDTLMGLFSIGKIPSGNKDPYALRRAASGIIKIVLNLGINFDLRNI 501 Query: 529 IE--DQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 + N F + L+ ++++R D+ +I+A L +L + I L+E Sbjct: 502 LNLIKPNYKNFDLNYLESFVYERLYSIYDVNPSVIKACLNSSQSDLKRLNAAIIALDEIC 561 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 + + KR+ I+ E E++ + E L +I Sbjct: 562 KMKDFKDNFSTFKRLSNIIKDSEIA------EVNESLFEEDVENELNNKFKALNLNID-- 613 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + L + I++FFD V++N D+ +++ NR+S++ I L V ++++I Sbjct: 614 ----DTKTYLESLFGLKNSIDLFFDSVMINHDNPKIKANRISIIGQIYKAFLKVADIKEI 669 >gi|78184814|ref|YP_377249.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9902] gi|78169108|gb|ABB26205.1| Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9902] Length = 720 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 186/754 (24%), Positives = 316/754 (41%), Gaps = 94/754 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FLLEI +EE+PA +A + L + L E + + ++ + TP RL + + L Sbjct: 4 TFLLEIGTEELPADFARQALDQLRERVPHDLAEARLSHGSISIFGTPRRLVVSIPDLDDR 63 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ EER GP V G A GF + G+ Q +D KG A + Sbjct: 64 QPDLREERKGPPVAQAFKDGVPGPAAIGFAKRCGIDASQLEQ--RDTPKGPCVFATVLTA 121 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +L+ ++P I + + MRW T + RP++ ++ + + +I Sbjct: 122 GRDGVSLLRELIPTWIDALQGRRFMRWGTGTQ-----RFSRPIRWLVAL-----HGDDVI 171 Query: 177 DLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 ++++ + + GHR + + + S D Y++ L++A VL+D + R I Sbjct: 172 NVEMPGADPVVRSDRYSRGHRLYGNQQLCIASADQYVKTLQKAGVLVDRDERSRLIRASI 231 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A A E L EE++ LVE +V G +++L LP E+I ++ +Q+ Sbjct: 232 DQGAEAAEGEANCPDRLFEELVDLVEDPRVLQGQIAERFLQLPPEVISTVMQAHQRYVPL 291 Query: 293 -----------RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQ 341 T E VL F+LV+N A I +GN RV+ ARL DA F + D+ Sbjct: 292 EIPGLDPDPLRLTAEAVLRPEFLLVANGL-EQASALITRGNERVLGARLADAEFFLEVDR 350 Query: 342 NNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA 401 R + V F +G+ +R RI L ++ Sbjct: 351 RQ----------------------ASATRREALSRVTFAEGLGSLRDRCDRIERLTNQLL 388 Query: 402 QLIDADVALV---DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH 458 + ++ RA L K DL +++V EFPELQG +G +Y + + E+ A+ EH Sbjct: 389 TDLALSDSVAMASRRAAHLCKHDLVSQMVGEFPELQGLMGGKYLLEEGESRDVALAVVEH 448 Query: 459 LKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE 518 PRG + +P+ V+LA++ + L++ +A E+P+GS DPYALRRA G++ I+ Sbjct: 449 YLPRGAGDELPSTDAGAVVALAERFELLLSIFAKGERPTGSSDPYALRRAGNGVLLILWN 508 Query: 519 NKIDIPLSQFIEDQNLI---LF-----------------FHDRLKLYLHDRDIRHDLIEA 558 + L+ F+ LF R+ L D DL++A Sbjct: 509 QGWKLDLNVFLAKAVEAWRELFPAFAVDTAQLTSDLSALLRQRITSQLEDDGYAADLVQA 568 Query: 559 ILRPEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISL 612 + + L + I+ L+ + +R ++ + +S Sbjct: 569 VAGDTVSTTRLLHDPLDVRVRIQLLHGLRDQGRLTAVQAVVQRASRLAEKGDLPLDVLSS 628 Query: 613 E--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---Q 667 + P +EK L+ + + Y ++ D+L +E FFD Sbjct: 629 TEVVDPSRFESASEKGLFDATE----RLNPLAERGAYQELCDVLVESTPALEAFFDGDQS 684 Query: 668 VLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+V DD +R NRL+LL ++N + + I Sbjct: 685 VMVMADDPALRMNRLNLLGVLRNQAAVFAQFELI 718 >gi|239948186|ref|ZP_04699939.1| glycyl-tRNA synthetase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239922462|gb|EER22486.1| glycyl-tRNA synthetase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 664 Score = 621 bits (1603), Expect = e-175, Method: Composition-based stats. Identities = 227/702 (32%), Positives = 346/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + +E + + ++ + P R+ L+ L + K E G Sbjct: 13 IPALMQKNAEEGYLNIFTKIFEENEI-FAKVQVFAGPRRIMLHATHLPKVTLSKELEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P A + AI+GF ++ + + K Y V + +R I+++L I+ AI Sbjct: 72 PSTEAPEAAINGFCKAHNVSKLELST--KLINNQLYYFFVKKTEEREIKEILPEIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E ++ L + NITYGH Sbjct: 130 NKYSWAKSMFWGNYK-----IKWIRPLRNILCIFDGE-----VLPLQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V + Y L E V+L+ R I + LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFEDYRNKLLENHVILERTKREEVIKSGLLELANSHNLNIKEDNRLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LP+E++ +++T QK F + G A F+ VSN + + Sbjct: 240 VAGLSEFPVVLLGKIPQKFLELPKEVLISSMRTXQKYFCLFDKTGNFAPYFLFVSNGRFA 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + +++GN +V++ARL DAL+F+K+D +K L+ R+ +L Sbjct: 300 N-TDLVIKGNEKVLSARLSDALYFYKQDI--------------------AKTLESRLGKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHA++G E+V RI + K IA + + L K+DL +E+VREFPE Sbjct: 339 EA--VTFHAELGKLREKVERITKICKHIAP----NNKDLITVAKLCKSDLVSEMVREFPE 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI++H KPRG +NVP+ ++LADKLD+L+ Sbjct: 393 LQGIMGYYYAKHEGLNEEVATAIKDHYKPRGLNDNVPSRNA-ALLALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRIILENK+++ L+ I + FF Sbjct: 452 GEAPTGSGDPYALRRQALGIIRIILENKLELHLNSLINFSINLYKDSSDKNKDLIISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R+K Y + D LI A+L NL+ + L EF G + L + +R I Sbjct: 512 ERVKFYFKN-DYDIALINAVLDL---NLVDTKFKLDALKEFLIEDAGRQLLNAYRRASNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + ++I + + + EK L+ VI I +S+ K Y + +LL S+ Sbjct: 568 I-----DGQKIIGLVDASLFITQPEKELFEVIQKISPQIIDSIADKDYKRALNLLSSLLT 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLLQ + + ++ Sbjct: 623 PITSFFDNVLVNDSDSKIAQNRLSLLQNTCELFHKIAKFNRL 664 >gi|312143994|ref|YP_003995440.1| glycyl-tRNA synthetase, beta subunit [Halanaerobium sp. 'sapolanicus'] gi|311904645|gb|ADQ15086.1| glycyl-tRNA synthetase, beta subunit [Halanaerobium sp. 'sapolanicus'] Length = 689 Score = 621 bits (1602), Expect = e-175, Method: Composition-based stats. Identities = 207/729 (28%), Positives = 347/729 (47%), Gaps = 72/729 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + + EI +EE+PA K D + + Y+ + Y TP RL L +K L Sbjct: 4 MAKNLIFEIGTEEMPAESMKKFRIDYLECAKEIFANNNLEYEAINVYSTPRRLVLSIKNL 63 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + +K E GP V G KA GF R G++ + K A Sbjct: 64 AEKQKDKRESVRGPAVNIAYDENGEATKAGQGFARGQGVEVADLVE------KDGYLYAE 117 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + +D+L I+ ++KVP PK+MRW + +IRP+K +L + E Sbjct: 118 KVEKGKASKDILADILKSIVKKVPLPKAMRWGSVK-----MEFIRPIKWLLALFGEEK-- 170 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 IDL++ ++ + GHRF + +K++ D Y L++ +++ RR I + Sbjct: 171 ---IDLEIADVNSEVFSLGHRFLSEGKVKIKHADTYFNILQDNYIIVKEGTRRKIIKDQI 227 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +L + + V + LL+E++ LVE+ F G F ++YL LP+E++ ++ +Q+ F Sbjct: 228 EKL--NLSGKAVIKESLLDEVVDLVEYPTAFKGQFSEEYLELPDEVLITAMEKHQRYFPV 285 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 + G L FI V + + D A ++ GN V+ RL+DA F+ DQ S Sbjct: 286 K-ANGELKAEFIGVRDGGS-DYLAEVIAGNEMVLKGRLDDAQFFFAEDQKYGFINRS--- 340 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 D+ D+VF +G+ ++V ++ + ++A ++ Sbjct: 341 -------------------EDIKDIVFQQDLGSVNDKVQKLEEITSELADKLNYRADKKE 381 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA LSK DL TE+V EF LQG +G+EYA+L E +AI EH PR +++P Sbjct: 382 KAVRAAELSKNDLATEMVNEFANLQGIMGREYALLAGEAEETAEAIYEHYLPRYAGDSLP 441 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +++A+KL L + + + PSGS+DP+ALRR G++RIIL ++ I + + I Sbjct: 442 KTDSGKLLAMAEKLFNLSSHFLLGNIPSGSQDPFALRRQATGLLRIILAEELSINILEII 501 Query: 530 EDQNLI----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + I F RL+ L D +IR+D+I A++ +++ + I Sbjct: 502 KMSMKIVDINKSTVNEVSLKLKEFIKQRLENLLSDLEIRYDIINAVIDVNDNDFVDIYQR 561 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 + L EF S + F+ + + + I E N + EI+ L + EK+LY V Sbjct: 562 AEKLMEFRSQ-NPQLFVDLVRGLVRAKNISE--NLDSKSEINAGLLTKDEEKQLYEVYQK 618 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 I++ K Y + LL + E I+ F D V+V V+D E++ NRLS+L I +++ Sbjct: 619 NQPLIKDHFAKKEYKKGFYLLVELKEDIDKFLDNVMVMVEDEELKKNRLSILSEISDLMR 678 Query: 694 IVINVQKIV 702 VIN+++I Sbjct: 679 EVINIEEIA 687 >gi|223040748|ref|ZP_03611015.1| glycyl-tRNA synthetase, beta subunit [Campylobacter rectus RM3267] gi|222877938|gb|EEF13052.1| glycyl-tRNA synthetase, beta subunit [Campylobacter rectus RM3267] Length = 677 Score = 621 bits (1601), Expect = e-175, Method: Composition-based stats. Identities = 184/725 (25%), Positives = 334/725 (46%), Gaps = 79/725 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + ++EI EE+PA K +++ L + + Y+TP R+ + Sbjct: 5 KELIVEIGVEELPAIPFLKECGNVAAKWRETLAQNSLD-SECEFYYTPRRIAFCHPKFAV 63 Query: 62 HSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E +G GA A F + G+ S+ + + K +V Sbjct: 64 RQEDGFSEFIGAPRQVAQKDGAWTPAALSFAKKCGID-ESELKFETVGGK-EVLYYKKPV 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L ++ + + + KSMRW F +IRP++S LC+L +++ Sbjct: 122 AGKPSAELLGDMIEKFLLSLNFGKSMRWGEGK-----FEFIRPVRSFLCLL-----GDEV 171 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + ++ G+ + +R V++ Y + + ++LD RR IL++ ++ Sbjct: 172 VKFNKFDVESGDSIFMYRSVGYDKFTVKNAKDYFAAMPKIGIILDQNARREKILSEFKQI 231 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + G+ + D+ LL+E++ + E +G F++++L +P E+I ++K NQ+ F Sbjct: 232 EAKNGVTVEVDEALLDEVVAITEHPTALLGGFEREFLEVPSEVIITSMKENQRYFPVF-E 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 G LAN F++VSN + + A IV+GN +V+ ARL DA+ FW+ D + LK Sbjct: 291 SGKLANRFVVVSNAISPEP-ALIVKGNEKVLRARLSDAMFFWRSDLAHEFGPEKLK---- 345 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLI----DAD 407 ++ + ++G+ ++ +R + L K A + D Sbjct: 346 --------------------NITYLKELGSTYDKSARELGVAKRLAKICADRLKACAGED 385 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 AL++R+++LSKADL T++V EF ELQG +G YA + EN + AI+E P G Sbjct: 386 YEALLERSVMLSKADLTTQMVYEFTELQGVMGGYYAAAKGENENVVTAIKEQYLPSGEAS 445 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ S V+LA KL+TLI ++ + PSG+KDPYALRRA G+I+II ++ ++ Sbjct: 446 ALPSTIFSSVVALAIKLETLIGLFSAGKIPSGNKDPYALRRAANGVIKIIQNENLNFDIA 505 Query: 527 QF----------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 F + + LI F DRL + D+ +++A L + ++L + I+ Sbjct: 506 AFLRETAEGYAKFDVEALIGFIFDRLYTFF---DVNPSVVKACLASKKGDVLAQCEAIEA 562 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L ++ + + KR+ I+ E + E+EK+L Sbjct: 563 LGAICAAEDFRQNFSTFKRLANIIK------DENFGVVDEAKFENESEKKLNDAFKAAVK 616 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 Y + L + I+ FFD V++N +D VR NRL+L+ I L + Sbjct: 617 ------AGGSYSERLKNLFGLKAAIDEFFDNVMINAEDELVRKNRLALVGQIYAEFLKIA 670 Query: 697 NVQKI 701 ++++I Sbjct: 671 DIKEI 675 >gi|313903269|ref|ZP_07836661.1| glycyl-tRNA synthetase, beta subunit [Thermaerobacter subterraneus DSM 13965] gi|313466357|gb|EFR61879.1| glycyl-tRNA synthetase, beta subunit [Thermaerobacter subterraneus DSM 13965] Length = 740 Score = 620 bits (1599), Expect = e-175, Method: Composition-based stats. Identities = 206/763 (26%), Positives = 346/763 (45%), Gaps = 104/763 (13%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+E+ EEIPA +A L+ L E G+ Y+ +R TP RL L ++GLSP Sbjct: 16 DLLVEVGCEEIPAGDCGEARRQLAERAGTALAEAGLTYEVVRSLGTPRRLTLVVQGLSPR 75 Query: 63 SPEKIEERLGP-------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E GP G A GF RS G++ + + +G+ A Sbjct: 76 QEAREEWVRGPSRAAAFGPGGEPAPAALGFARSQGVEVSQ--LVVRQTPQGEYVFARKVH 133 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 R +VL ++P + + + ++MRW +IRP+ ++ +L E++ Sbjct: 134 QGRPAAEVLAELLPAVLGGLEFRRTMRWGAGE-----HRFIRPVHWLVALL-----GEEV 183 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSL--DHYIRDLEEAMVLLDPECRRNAILNDAH 233 + + + G ++YGHRF P +++ S D Y R L EA V++DPE RR I+ A Sbjct: 184 LPVSFAGVRAGRVSYGHRFLHPEAVELASAAEDEYRRRLAEAYVVVDPEERRQRIVEQAR 243 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +A+AVG E D +LL+E++ LVE+ F GSF + L LP +++ T+K +Q+ F R Sbjct: 244 AVAAAVGGEAEIDPELLDEVVDLVEYPTAFTGSFAPEMLELPRDVLVTTMKVHQRYFPVR 303 Query: 294 TR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 E L FI V N + QGN RV+ ARL DA F+++D+ Sbjct: 304 QPGESRLMPYFIAVRNGD-ERHLQTVRQGNERVIRARLADARFFFQQDRQ---------- 352 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVA 409 + L R+A L+ V F +GT ++ R+ L +A+ + + Sbjct: 353 ----------RRLADRVADLER--VSFLPGLGTLLDKTRRLERLVGWLAEELGLPAEERQ 400 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE-NV 468 RA L+KADL T +V EF EL G++G+EYA+L E + A+ E PRG + + Sbjct: 401 QAARAARLAKADLVTALVYEFTELAGRMGREYALLDGEPPAVAQALAEQYLPRGGDDGEL 460 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII------------ 516 P+ + +++AD+ DTL +A +P+GS+DPY LRRA +G++R++ Sbjct: 461 PSTWPGLLLAIADRADTLAGCFAAGLEPTGSQDPYGLRRAGVGLLRLLAGPAAQGPAGRA 520 Query: 517 ---------------------LENKIDIPLSQFIED----------------QNLILFFH 539 L+ +D L+ ++ L+ F Sbjct: 521 EGGGAPAGAGAAGSGHPALPPLDALLDQALAGYLPPVASPAVEVRFDPDEVRARLMDFLA 580 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 RL+ L + HD+I+A+L + ++ + + + E +S L +R + Sbjct: 581 ARLRGLLAEAGYAHDVIQAVLAVDARDVPGVWARARAVAELVASPLAADVLTVHRRAANL 640 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 R + + P E+ LYA + +QE++ + Y + + Sbjct: 641 ------AGRAEADAVDPALFREAEEQALYAAVEAAAGVVQEALAVRDYGAYFRAIAGLRP 694 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++ F D+VLV +D +R NRL+LL+ + + V + ++ Sbjct: 695 AVDAFLDRVLVMAEDPALRANRLALLKRVAGLAGRVAALGELA 737 >gi|217967701|ref|YP_002353207.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus turgidum DSM 6724] gi|226737050|sp|B8E0E8|SYGB_DICTD RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|217336800|gb|ACK42593.1| glycyl-tRNA synthetase, beta subunit [Dictyoglomus turgidum DSM 6724] Length = 689 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 198/727 (27%), Positives = 349/727 (48%), Gaps = 68/727 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 +FLLEI +EE+PA A + + + + + + +++++ + TP RL +Y+K LS Sbjct: 3 KNFLLEIGTEEMPAHFLDPAIKQIYDFSLNYFENQKISFEDIKTWATPRRLVVYIKNLSE 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EE GP G + F G ++ IK+ P +G K Sbjct: 63 KQESQEEEIRGPAAHVGYKNGVWTEVAKRFAEQYG-ASLEALYIKETP-RGKYIFLKRIK 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 ++L ++ + +PK M+W F + RP++ I+ + +E+ Sbjct: 121 EGVNTLEILPDYAVSLLKNIRFPKMMKWGNVD-----FYFGRPIRWIVALYGSEE----- 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + ++ + + RF PI+++ D YI ++E V++D R+N IL + Sbjct: 171 VKFEVAGVKSSRYSRPPRFLPQTPIEIKDADSYIDLMKENYVIVDQNERKNEILRHIKEI 230 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A++ L L D+DLLEE+ LVE+ +G FD KYL LPE ++ +T++ Q+ F R + Sbjct: 231 ANSNSLTLSYDEDLLEEVTYLVEYPTALLGQFDSKYLTLPEIVLIVTMEKKQRYFPLRDK 290 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 EG L N FI++ N + ++QGN +V+ ARL DA +++ D Sbjct: 291 EGNLINKFIVIRNG-TENYKEVVIQGNEKVLKARLADAEYYYNEDIRC------------ 337 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 PL++ +L ++F ++GT ++V R+R+L ++IA +++ + +++ Sbjct: 338 --------PLEKYSEKLS--GIIFQEQLGTIKDKVERVRILVREIANILELSTEEKEILE 387 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA+ L KADL T +V E+PEL G +G YA + E I E++ PR + +P N Sbjct: 388 RAVDLYKADLGTLMVSEYPELHGIMGSIYAKISGEREPIPQIIGEYIYPRTLEDQIPKNP 447 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI--- 529 +S + +AD++D+L ++A++ P+GS+DP LRR + G++R++LE + L Sbjct: 448 LSTVLGIADRVDSLTGYFALDLFPTGSEDPIGLRRISGGLLRLLLETDFKLNLRNLFMKS 507 Query: 530 -------------EDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + + +LF RL+ L D+ +D++EA++ D L + + Sbjct: 508 FEVYKFSDKCPISQIEKGMLFIGQRLRNLLLDK-YPNDIVEAVMEVGYDELWKLKRRVDF 566 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 + EF EK + R+++IL + EI+ EK LY Sbjct: 567 IREFKEKDPYEKLKRALNRLYRILPKDFS-----PKEINENLFNSPFEKELYRDYVKINK 621 Query: 637 HIQESMDHKRYHQIG--DLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 I + + Y + D L + IE FFD VLV + E + NRLSLL IK++ Sbjct: 622 EISKEILKGNYKVLLGYDFLKEFSDHIESFFDHVLVMSPNEEEKLNRLSLLFAIKSLFWE 681 Query: 695 VINVQKI 701 V++ K+ Sbjct: 682 VLDWSKL 688 >gi|217969300|ref|YP_002354534.1| glycyl-tRNA synthetase subunit beta [Thauera sp. MZ1T] gi|217506627|gb|ACK53638.1| glycyl-tRNA synthetase, beta subunit [Thauera sp. MZ1T] Length = 695 Score = 619 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 199/715 (27%), Positives = 338/715 (47%), Gaps = 64/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLKGLSPHSPEKIEE-R 70 P + + E + + LK +G+ R + +P RL + + ++ + K + Sbjct: 16 PPKALPRLGETFATRIAEGLKAKGLAPVDAAFRSFASPRRLAVTVAQVAAEAAAKEVTEK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ + + G+ + + ++ K + P + DV Sbjct: 76 LMPVSVALDAEGKPTPALLKKMEAKGIAAEAVARFERRLDGKAEALFHTAMVPGAKLADV 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L +V AI+ +P PK MRW + +++RP+ + + +++ + ++ Sbjct: 136 LSGVVQDAIKALPIPKVMRWGDGDA-----TFVRPVHKLTLL-----HGAEVVPGRVLDL 185 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYI-RDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G + GHRF + + + + D Y L E V+ + RR I A+ G Sbjct: 186 DSGRTSRGHRFMSRGDLSIATADAYEPTLLAEGKVIPNFAERRADIERQLLAEAAKQGAL 245 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 L E DLL+E+ LVE V++G F+ ++L +P+E + LT++ NQK F G L N Sbjct: 246 LNEYADLLDEVAALVEHPTVYVGEFEAEFLAVPQECLILTMRANQKYFPLFDGAGKLLNR 305 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSN+Q +D IV GN+RVV RL DA F+++D+ Sbjct: 306 FLIVSNMQVADPI-NIVAGNARVVRPRLSDARFFFEQDKK-------------------- 344 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 + L+ R+ RL VV+H K+G+Q ERV R+ L IA + DVA RA L+KADL Sbjct: 345 QKLEARLPRL--APVVYHNKLGSQLERVERLEALAGAIAAQLHGDVAAAKRAARLAKADL 402 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 T++V EFPELQG +G+ YA+ E DAI+ H +PR + +P ++ V+LADK Sbjct: 403 VTDMVGEFPELQGIMGRYYALADGEGEVVADAIQAHYQPRFAGDALPAGNVAAAVALADK 462 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED----------- 531 LD L+ F+ I P+G KDP+ALRRA LG++RI++E + + L + I+ Sbjct: 463 LDALVGFFGIGMVPTGDKDPFALRRAALGVLRILMEAPLPLELPRLIDTAAAGFKPGLLT 522 Query: 532 -----QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 L F ++RLK L + +I+A+L + + + + F + + Sbjct: 523 AEGFAAQLQDFMYERLKNLLRETGRDGAVIDAVLALRPARIDLVPAKLAAVEAFRALPEA 582 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + KRI IL E E L L AEK L+ + + ++ + ++ Sbjct: 583 EALAAANKRIVNILKKAEGAPGEPDL----ALLQEAAEKALFRQVVEVAPLVRSHVANED 638 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y L + ++ FF+ V+V ++ R NR++LL + ++ V ++ ++ Sbjct: 639 YTDALRALAGLRAAVDQFFEDVMVMAEEPLTRANRIALLAQLAGLMNQVADISRL 693 >gi|293603528|ref|ZP_06685949.1| glycyl-tRNA synthetase beta subunit [Achromobacter piechaudii ATCC 43553] gi|292817964|gb|EFF77024.1| glycyl-tRNA synthetase beta subunit [Achromobacter piechaudii ATCC 43553] Length = 712 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 184/729 (25%), Positives = 324/729 (44%), Gaps = 75/729 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + K + + + L+ G++ + + Y TP RL ++L + +P++ E+ Sbjct: 18 PPKALQKLGQAFAEGVRATLERHGLLAEGCAVTAYSTPRRLAVHLSAVLAQAPDQPYAEK 77 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQTISDCQI-KKDPKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + GL+ I + ++ K D +A + Sbjct: 78 LMPAKIGLTEDGKATPALQKKLAAKGLENIDLATLDRESDGKQDYLIARGTAAGSSLATG 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + A+ +P PK MR+ ++ ++RP ++ + A+ ++ + + Sbjct: 138 LQEGIDNALNGLPIPKVMRYQLADG-VTTVKFVRPAHGLVALFGAD-----VVPVSALGM 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G T GHRF P+ D Y L E+ V+ E RR+ I A + Sbjct: 192 QAGRDTLGHRFMCEGPVSFADADSYAATLAEKGRVVASFEGRRDDIQRQLLEHAGRLSAT 251 Query: 243 LVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGV 298 L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK F G Sbjct: 252 LGDDPEVAALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKYFPLFDPATGR 311 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN+ D IV+GN RVV RL DA F++ D+ Sbjct: 312 LTHRFLIVSNMHT-DNPVNIVEGNQRVVRPRLADAQFFFETDRK---------------- 354 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 PL R+ +L +V+H K+GTQ ERV R+R + + +A+ + DV DRA +L+ Sbjct: 355 ----TPLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGVAEQLGGDVTAADRAAMLA 408 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA E S +A+ + R + T+ Sbjct: 409 KADLGSNMVGEFPELQGIMGAYYAAGDGEPASVVEALRTQYRNRYDAPVTEDTLTAATLF 468 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI---ILENKI-------DIPLSQF 528 +A++++TL+ WAI P+G +DP+ LRRA LG+I + + L Sbjct: 469 IAERVETLVGIWAIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKVSQDGPLSLDGL 528 Query: 529 IEDQNLIL---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 + F ++R + L + D + +EA++ L + + Sbjct: 529 LTLAAGTFPAGKIPADTLAEVRTFIYERYRNQLIN-DFDRNAVEAVIALTP-PLHQVAER 586 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ F + + KRI +L E + ++ L+ AE+ L A ++ Sbjct: 587 VRAAAAFAQLPEAASLAAANKRIGNLLKKTEGEIG----AVNDAALVEPAERALAATVAA 642 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + L EP++ FF V+V +D VR NRL+LL + ++ Sbjct: 643 LRPQAEAQLAAGDFAGSLSTLAQAREPVDAFFVDVMVMAEDPAVRANRLALLSQLHGLMN 702 Query: 694 IVINVQKIV 702 V ++ ++ Sbjct: 703 QVADISRLA 711 >gi|237752864|ref|ZP_04583344.1| glycyl-tRNA synthetase subunit beta [Helicobacter winghamensis ATCC BAA-430] gi|229375131|gb|EEO25222.1| glycyl-tRNA synthetase subunit beta [Helicobacter winghamensis ATCC BAA-430] Length = 683 Score = 619 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 199/727 (27%), Positives = 320/727 (44%), Gaps = 78/727 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 LLEI +EE+PA ++ +L+ + + Y+TP RL + Sbjct: 6 SPLLLEIGTEELPAIPFLAELPNIKNKFQKILEAKRLNCA-FDFYYTPRRLVIIANDFPK 64 Query: 62 HSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 +I E GP + +A GF + G++ I+KD K ++ Sbjct: 65 IQNAEILEFFGPPLSIAYKDNTPTQAALGFFKKCGIEPKDTQTIEKDGK--EILYCQKSA 122 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L+ I+ ++ + + K+MRW + S+IRP+ ILC+L + KI Sbjct: 123 EQLPSNTLLEEIIKEFLESLNFGKTMRWGSLKE-----SFIRPISWILCLLDS-----KI 172 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 I L L + TY HR + P + SL+ Y++ LE V+LD R++ ILN ++ Sbjct: 173 IPLKLYGVESKAQTYVHRNVSFEPFDINSLESYLQTLENNGVILDQNKRKDRILNAITQI 232 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 +++ D++LL E++ + E+ G F +L LP I ++K NQ+ F T + Sbjct: 233 EKTQNIQVEIDEELLNEVVAITEYPTALFGEFSAHFLELPAPCIITSMKVNQRYFATY-K 291 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L + FILVSN + I+ GN +V+ ARLEDAL F+ D NN LKE Sbjct: 292 DGKLHHGFILVSNSLTENP-EEIITGNVKVLRARLEDALFFYHNDLNNGFMPEKLKE--- 347 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL----- 410 V F +G+ ++ R R++ K + L + Sbjct: 348 ---------------------VTFVEGLGSMWDKTERERLIVKALGDLFKESLQKGEQNL 386 Query: 411 ------VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 +D+A + SKADL +E+V EF ELQG +G YA AI+E P Sbjct: 387 GLAFEILDQACLFSKADLMSEMVYEFTELQGIMGYYYAKALRYEERVALAIKEQYLPNSE 446 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +P+N IS ++LA KLD L+ ++I + PSGS+DP+ALRRA G+I+IIL + Sbjct: 447 ESVLPSNLISAIIALAYKLDNLLGLFSIGKIPSGSRDPFALRRAANGVIKIILHFNLPFN 506 Query: 525 LSQFIEDQNLIL----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 L + ++ F +RL L L+ A+L +L I + Sbjct: 507 LREVLQTLKNHYKDFDTTGLENFILERLDSTLE---FNPSLLRAVLATNERDLAQIFQKL 563 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 L+ + + + KR+ I + K L I LL E LY Sbjct: 564 TALDSALKNQDKQLLTQTFKRLANITKEVDLKGE---LLIKEDKLLASEEIELYKSFKQC 620 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 Y + L ++ +E FFD+VLVN D + ++NR L+ I L Sbjct: 621 E------FSGNDYAKHLKSLLALSPILERFFDKVLVNAPDEDFKNNRKHLIARIYREFLN 674 Query: 695 VINVQKI 701 + ++++I Sbjct: 675 IADIKEI 681 >gi|153005319|ref|YP_001379644.1| glycyl-tRNA synthetase subunit beta [Anaeromyxobacter sp. Fw109-5] gi|152028892|gb|ABS26660.1| glycyl-tRNA synthetase, beta subunit [Anaeromyxobacter sp. Fw109-5] Length = 697 Score = 617 bits (1592), Expect = e-174, Method: Composition-based stats. Identities = 202/729 (27%), Positives = 333/729 (45%), Gaps = 68/729 (9%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L EI +EEIPA A + L L L + + ++ TP RL ++ + ++ Sbjct: 1 MADLLFEIGAEEIPAGFVPPALKQLQEDLARALDAARLSHGEVKAVGTPRRLAVWARDVA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + E LGP V G +A GF +S G+ + + KG+ Sbjct: 61 RRQTDAKTEALGPPVAQAFDASGNPTQAALGFAKSQGVDVSKLERAQT--PKGERVAVTR 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + R E VL ++ + + + K+MR S ++ RP++ ++ + Sbjct: 119 IEEGRKAEKVLPELLERLLGGLRFKKAMR-----SRWDEVTFARPIRWMVALYGG----- 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQ-SLDHYIRDLEEAMVLLDPECRRNAILNDA 232 K + + E+ G +T+GHRF AP I ++ + D Y+ L A VL+DP RR A+ + Sbjct: 169 KPLKVRHGELVSGAVTFGHRFAAPRSIALKGTPDDYVAKLRRAKVLVDPVERRAALEQEL 228 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 + A A G +L D+ L+E+++ LVE G F+K L LP E++ ++ +Q+ F Sbjct: 229 AKAAKAAGGKLRPDEPLVEQVLYLVEHPTGVAGEFEKSNLDLPPEVVVSEMRNHQRYFAL 288 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L N F+ VS D A G RV+ ARL DA F+ D+ Sbjct: 289 VDGKGRLKNRFVAVSGTPVKDPRVA-RHGYERVLRARLADARFFFDEDKR---------- 337 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VAL 410 +PL R+ L F A++G++ R RI +G +A+ I + V+ Sbjct: 338 ----------RPLRDRIEDLGRR--TFQARLGSELARADRIVAIGSALARAIGREELVSD 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V A L+K DL T +V EFPELQG +G YA L+ +AIE+H KP G E +P Sbjct: 386 VVEAARLAKTDLTTGMVGEFPELQGVMGGHYARLEGLKPEIAEAIEDHYKPVGASEEMPR 445 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 + V++AD+L +L+ + EK +G+ DP+ LRRA +GI+R++L + LS IE Sbjct: 446 GDVGALVAIADRLHSLVGIIGVGEKATGAADPFGLRRAAIGILRLLLARGYHLSLSAAIE 505 Query: 531 D------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + ++ F RL+ + DL+EA+L D+++ Sbjct: 506 QTLDTLGGVRLASDRAVVAEQVLDFLRGRLRAQWSEE-FDADLVEAVLGAGFDDVVDARR 564 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 ++ L E + A ++ KR+ I E + Q L EAE+ L + + Sbjct: 565 RLEALAEVKARADFVPLAVAFKRVANIQEKSETAG----AVVDRQLLREEAERHLLSELE 620 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + + Y + + ++ + FFD VLV ++ VR NRL L++ + + Sbjct: 621 RVESEAAALRGTRDYPGVLRNVATLEPAVARFFDDVLVMAEEPAVRANRLGLMRRVAALF 680 Query: 693 LIVINVQKI 701 V + +KI Sbjct: 681 SGVADFRKI 689 >gi|51474017|ref|YP_067774.1| glycyl-tRNA synthetase subunit beta [Rickettsia typhi str. Wilmington] gi|81826275|sp|Q68VR4|SYGB_RICTY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|51460329|gb|AAU04292.1| Glycyl translase [Rickettsia typhi str. Wilmington] Length = 664 Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats. Identities = 229/702 (32%), Positives = 344/702 (49%), Gaps = 63/702 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + KE + + ++ + P R+ L+ L K EE G Sbjct: 13 IPAFMQKNAEEAYLNIFTKIFKENEI-FAQVQVFVGPRRITLHATNLPKVILPKEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + A + AI+GF + + K K Y V + R ++++L I+ AI Sbjct: 72 PSIEAPEIAINGFCKVHNVNKFDLST--KLINKKLYYFFVKKTQAREMKEILPKIIIDAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E I+ L + NITYGH Sbjct: 130 NKYSWIKSMFWGCYK-----IKWIRPLRNILCIFDGE-----ILPLQFGHLSANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R +++ ++Y L E V+L+ R I LA+A L + +D L+EE Sbjct: 180 RLTNNKKLEIIDFENYRNKLLENNVILERLKREEIIKVGLLELANAQNLNIKQDARLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LPEE+I ++ +QK F + G A F+ V N + Sbjct: 240 VTGLNEFPVVLLGKIPQKFLELPEEVIISVMRKHQKYFCLFDKTGNFAPYFLFVINGRFV 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + I+QGN +V++ARL DAL+F+K D +K L+ R ++L Sbjct: 300 N-IELILQGNEKVLSARLADALYFYKHDI--------------------AKTLESRFSKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V+FHAK+G+ E+V RI + + IA D + A L K+DL +++V EFP+ Sbjct: 339 E--SVIFHAKLGSLKEKVDRITDICRYIAP----DNIDLIMAARLCKSDLVSDMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NVP+ + ++LADKLD+L+ + Sbjct: 393 LQGIMGYYYAKHEGLNEEVAKAIRDHYKPQGLNDNVPSGN-ATLLALADKLDSLVGLIIV 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-------------FFH 539 E P+GS DPYALRR LGIIRII+ENK++I I + FF Sbjct: 452 GETPNGSGDPYALRRQALGIIRIIIENKLEINFINLINFAVSLYKVPTNTHLDSVISFFE 511 Query: 540 DRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQI 599 +R K Y + D LI A+L NL+ + L EF G++ L + KR+ I Sbjct: 512 ERAKFYFKN-DYDIALINAVLDL---NLVDTKFKLDTLKEFLVQDVGKQLLNAYKRVSNI 567 Query: 600 LAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICE 659 + N++I+ + + EK L+ VI I + +K Y + +LL S+ + Sbjct: 568 I-----GNQKITGLVDVSLFSTQYEKELFEVIQIISQQIIAIIANKDYKKALNLLSSLLK 622 Query: 660 PIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 PI FFD VLVN D ++ NRLSLL + V+ ++ Sbjct: 623 PITSFFDNVLVNDSDPKIAQNRLSLLHNTCEVFDKVVKFCRL 664 >gi|71083322|ref|YP_266041.1| glycyl-tRNA synthetase subunit beta [Candidatus Pelagibacter ubique HTCC1062] gi|91762248|ref|ZP_01264213.1| glycyl-tRNA synthetase beta subunit [Candidatus Pelagibacter ubique HTCC1002] gi|71062435|gb|AAZ21438.1| Glycyl-tRNA synthetase beta subunit [Candidatus Pelagibacter ubique HTCC1062] gi|91718050|gb|EAS84700.1| glycyl-tRNA synthetase beta subunit [Candidatus Pelagibacter ubique HTCC1002] Length = 689 Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats. Identities = 212/721 (29%), Positives = 358/721 (49%), Gaps = 56/721 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DF +E++SEEIPA +Q + L L +E+ ++++ + TP+RL + +GLS Sbjct: 1 MSDFFIELFSEEIPAGLQSNSRNVLLENFQNLFEEKKILFKKSSSFSTPNRLIILFEGLS 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +K EE GP V A +KAI+GFLRS ++ +KK +KG+ Y K Sbjct: 61 KEIIQKAEEIKGPNVKAPEKAIEGFLRSNQIEKKD--LLKKTLEKGEFYFFKKASSKINT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L+ P+ + K+ W KSM W + SW RPLKSIL + +K ++ Sbjct: 119 IDLLQEYTPIILDKLQWKKSMTWGNYN-----LSWARPLKSILAVF-----DDKSLNFKF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N T+ + ++ Y ++ +++D R+ I+ + +++ Sbjct: 169 HHLIASNSTFIDKEFEDKKKIFKNFKSYKDFFSQSGIIIDHVLRKEFIVKEIEKISRKNN 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 + + LL+E+ +VE + + FD+K+L +P+E++ +T++ +QK F T ++G + Sbjct: 229 FIVEPNNKLLDEVTDIVEQPNILVCKFDQKFLNIPKEILIITMQYHQKYFPTFDKKGKIT 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F++V+N D I GN RVV ARL DA FW++++ Sbjct: 289 NEFLVVANNN--DEKGYIKMGNERVVEARLSDAQFFWEKNK------------------- 327 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 S+ L +++++L ++ + +G+ +++ R+R LG I+ + V+ + + K Sbjct: 328 -SQNLVKQVSKLKNMN--YFKGLGSYFDKIQRMRKLGGIISDELLISKDQVELSASICKV 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL ++IV EFPELQG +G +A +Q + AI EH +P G P SI ++L Sbjct: 385 DLVSDIVGEFPELQGIMGGHFAEVQGFDKEIALAISEHYQPVGLDSKTPKKPFSIALALT 444 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL---- 536 DK+DTL+ F+ IN+KP+ SKDPYALRR+ LG+I+++++N + + I + Sbjct: 445 DKIDTLVGFFGINQKPTSSKDPYALRRSALGVIKLLIDNNKEFKIKDLISYSTSLHKDQG 504 Query: 537 --------------FFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKHLNEFF 581 F DRLK Y+ ++ IR ++IEA + D++ I LN Sbjct: 505 FIFSNDSSQKELSDFLMDRLKYYMKEKKIRSEIIEASIKAHGLDHMNKIYKKASTLNGLI 564 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKK-NREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 S GE + S KR + IL E K + E+S P + EK L+ I++ + Sbjct: 565 SKVIGEDIITSYKRAYSILESELKNTDLELSNTTDPGIFKNDYEKNLFKKINEIRKYFTN 624 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + Y + ++L + FFD V VN DD+ ++ NRL LLQ + IN Sbjct: 625 IGKDENYRETLEILAGAKKATSEFFDNVKVNDDDKNIKKNRLELLQMLCRTFDNYINFSN 684 Query: 701 I 701 I Sbjct: 685 I 685 >gi|315638432|ref|ZP_07893609.1| glycyl-tRNA synthetase beta subunit [Campylobacter upsaliensis JV21] gi|315481423|gb|EFU72050.1| glycyl-tRNA synthetase beta subunit [Campylobacter upsaliensis JV21] Length = 662 Score = 616 bits (1590), Expect = e-174, Method: Composition-based stats. Identities = 194/718 (27%), Positives = 335/718 (46%), Gaps = 75/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ LLKE + Y+TP RL + Sbjct: 1 MKELLIEILTEELPAIPFLKELPNIKGKWEKLLKEYRLE-AEFDFYYTPRRLVFFHPHFK 59 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTI-----SDCQIKKDPKKG-DVYLAVLR 114 + E +G K DG L GL I + QI KG +V Sbjct: 60 TKQENSLVEFIGAPKNVAYK--DGKLSQAGLSFIQKVGIDETQICFREIKGKEVLYYQKE 117 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + ++L ++ ++ + + KSMRW F +IR +++I+C+L E Sbjct: 118 LEGKESSEILGEMIENFLKSLHFGKSMRWGAYQ-----FEFIRAIRNIVCVL-----GED 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + T+ HR + ++ Y LEE V+LDPE R+ I+ Sbjct: 168 LVKFQSYGVQSSKQTFVHRSVSYEAFAFKNAKEYFELLEENFVILDPEKRKEKIIESFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + L + +D +LLEE+I + E+ +GSF+ ++L +P E+I +++ NQ+ F T Sbjct: 228 IETKENLNIAQDDELLEEVIAITEYPNALLGSFESEFLEIPSEVIITSMRENQRYFATFD 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 +G L+N FI+VSN D + I+ GN RV+ ARL DA+ F+K D Sbjct: 288 EKG-LSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYKND-------------- 331 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD-R 413 L + + + +++ +GT ++V R + L + + +D D + Sbjct: 332 ----------LQKGLEPEKLSKMLYLDSLGTVMDKVEREKALALLLCKFLDNDKQEAILQ 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ SKADL T++V EFP LQG +G YA + AI+E P +P+++ Sbjct: 382 ALHFSKADLATQMVYEFPNLQGIMGSYYAEKMGLSYEISLAIKEQYLPNQS--ALPSSEF 439 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 S V+LA K DTL++ ++I + PSG+KDPYALRRA GI++I+L L+ F+++ + Sbjct: 440 SSIVALAYKFDTLLSLFSIGKIPSGTKDPYALRRAANGILKILLHLGKKFDLNAFLKEAS 499 Query: 534 L----------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 F +R+ + I+A+L +N +L+ I +K L E Sbjct: 500 KTYKSFDLNSLYDFILERIYPFYEA---NPSFIKAVLSTKNSDLIHIDSAVKALIELSKK 556 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I E I+ EAEK+LY +ES+ Sbjct: 557 TNFNENFSTFKRLANIATKNENL-------INESLFENEAEKKLYLAF-------KESLK 602 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + Q + L ++ I+ FF+ V++N ++ ++++NR +L+ I N L + +++++ Sbjct: 603 VQNLKQKLESLFALKPFIDEFFENVMINSENEKLKNNRQALIFAIYNEFLKIADIKEL 660 >gi|330818265|ref|YP_004361970.1| Glycyl-tRNA synthetase beta subunit [Burkholderia gladioli BSR3] gi|327370658|gb|AEA62014.1| Glycyl-tRNA synthetase beta subunit [Burkholderia gladioli BSR3] Length = 699 Score = 614 bits (1585), Expect = e-173, Method: Composition-based stats. Identities = 204/716 (28%), Positives = 331/716 (46%), Gaps = 63/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNM--RQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L +I ++ TP RL + + + +PE+ + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLIDGEAVFERFATPRRLAVLILNVRAVAPERQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQT--ISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P G + L + G I+D + +D K + + P + D Sbjct: 79 VLPVSVALDANGNPTPPLAKKLAALGRPELGIADLERAQD-GKAEAFFLNYSAPGVTLAD 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L+ + + K+P PK M + S ++RP+ + + ++ + Sbjct: 138 GLQAALKETLDKLPIPKVMTYQRPDG--SDVQFVRPVHRLTVL-----HDTDVVPVSAFG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEE-AMVLLDPECRRNAILNDAHRLASAVGL 241 I G+ T GHRF + + + S Y L E V+ R+ I A G Sbjct: 191 IDAGDTTLGHRFLSSGAVAIGSAAGYAETLRERGRVIAHFVDRKEQIRTAL--AEQAGGD 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 TVVMPEALLDEVASLVEWPVVYACRFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ + IV+GN RVV RL DA F++ D+ Sbjct: 309 RFLIVSNIETATPVE-IVEGNERVVRPRLADAKFFFETDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 L R+ RL +VV+H K+G+Q RV RI + IA I AD AL RA L+KAD Sbjct: 349 -TRLADRVPRL--ANVVYHNKLGSQLARVERIEAIAAGIAPAIGADPALAQRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +P +S V+LAD Sbjct: 406 LLTDMVGEFPELQGTMGTYYARHDGEPEEVAVACTEHYQPRFSGDTLPEAAVSTAVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN-------- 533 KL+TL+ W I P+G KDP+ALRR LG++R++LE ++ + + + + Sbjct: 466 KLETLVGIWGIGLAPTGEKDPFALRRHALGVLRLLLEKQLPLDIVELLRAAQASFAGIAG 525 Query: 534 -------LILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + FF DRL+ L +R I+A+L E + ++ + + EF A+ Sbjct: 526 VADSTDAIFAFFLDRLRGLLRERGYSAGEIDAVLGLEPTRIDELIARLDAVREFTRLAEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + KRI IL +K I P L AE+ L A +++ +Q + + Sbjct: 586 ETLAAANKRISNIL---KKSEGAAPGAIQPALLAEPAEQALAAQLAEVAPRVQSQLAARD 642 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 643 YTGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLSALHQQMNCVADISKLA 698 >gi|311104091|ref|YP_003976944.1| glycyl-tRNA synthetase subunit beta [Achromobacter xylosoxidans A8] gi|310758780|gb|ADP14229.1| glycyl-tRNA synthetase, beta subunit [Achromobacter xylosoxidans A8] Length = 712 Score = 614 bits (1585), Expect = e-173, Method: Composition-based stats. Identities = 188/729 (25%), Positives = 325/729 (44%), Gaps = 75/729 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + K + + + L+ G++ M Y TP RL ++L + +P++ E+ Sbjct: 18 PPKALQKLGQAFAEGVRATLERHGLLAAGCAMTAYSTPRRLAVHLSAVLAQAPDQPYAEK 77 Query: 71 LGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ L + GL+ I ++++ K D +A + Sbjct: 78 LMPVKIGLTDDGKATPALQKKLAAKGLENIDLATLERESDGKQDYLVARGTAAGAQLAAG 137 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI +P PK MR+ S ++RP ++ + A+ ++ + + Sbjct: 138 LQEGIDAAINGLPIPKVMRYQLADGVTS-VKFVRPAHGLVALFGAD-----VVPVSALGL 191 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G T GHRF + P+ D Y L E+ V+ E RR+ I A + Sbjct: 192 AAGRDTLGHRFMSAGPVSFADADAYAATLAEKGRVMASFEGRRDEIQRQLLDHAGRLNAT 251 Query: 243 LVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGV 298 L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK F G Sbjct: 252 LGDDPEVAALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKYFPLFDPASGR 311 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN+ D IV+GN RVV RL DA F++ D+ Sbjct: 312 LTHRFLIVSNMHT-DNPVNIVEGNQRVVRPRLADAQFFFETDRK---------------- 354 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 PL R+ +L +V+H K+GTQ ERV R+R + + +A+L+ DV+ DRA +L+ Sbjct: 355 ----TPLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGVAELLGGDVSAADRAAMLA 408 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA E S A+ + R + + Sbjct: 409 KADLGSNMVGEFPELQGVMGAYYAAGDGEPDSVVQALRTQYRNRYDAPVTADTLTAAVLF 468 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI---ILENKI-------DIPLSQF 528 +A++++T++ WAI P+G +DP+ LRRA LG+I + + L Sbjct: 469 VAERVETMVGIWAIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKISEAGPLSLDGL 528 Query: 529 IEDQNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 +E F ++R + L + + +EA++ L + + Sbjct: 529 LELAAGTFPAGKIPADTLPEVRAFIYERYRNQLINE-FDRNAVEAVVALTPP-LHQVAER 586 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 ++ F + + KRI +L E + ++ L+ AEK L A +S Sbjct: 587 VRAAAAFAQLPEAASLAAANKRIGNLLKKAEGEIG----AVNDAALVEPAEKALAAAVSA 642 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 + + + L + EP++ FF V+V +D VR NRL+LL + ++ Sbjct: 643 LRPKAEAQLAAGDFAGSLSTLAQVREPVDAFFADVMVMAEDPAVRANRLALLSQLHGLMN 702 Query: 694 IVINVQKIV 702 V ++ ++ Sbjct: 703 QVADISRLA 711 >gi|262277439|ref|ZP_06055232.1| glycyl-tRNA synthetase, beta subunit [alpha proteobacterium HIMB114] gi|262224542|gb|EEY75001.1| glycyl-tRNA synthetase, beta subunit [alpha proteobacterium HIMB114] Length = 687 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 215/721 (29%), Positives = 358/721 (49%), Gaps = 57/721 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M DF LE+YSEEIP +Q A + + ++ L E + ++ + + TP RL + ++ ++ Sbjct: 1 MSDFFLELYSEEIPHGLQIHARKQIHELIFKELNENNIKFKGLDVFSTPKRLIVLIENIT 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 + + +E GP+VG +A++GFL+S + + I+K KG+ Y L L Sbjct: 61 LNQKIESQEVKGPKVGCNDQALEGFLKSKN--ALKEDLIQKSTDKGEFYFVKLPAKTLLT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D+L+ +P +Q + W KSMRWS W RPLKSILC+L K++D Sbjct: 119 SDILRKKLPSILQTINWKKSMRWSDHDCF-----WGRPLKSILCLL-----DNKVLDFSF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 I N TY + +K+++ Y ++LE+ + ++ R + I + +L Sbjct: 169 FHINSSNSTYVNGPFEDKEVKIKNFKDYKKNLEKNKIEINHIKRESKINIELEKLLKKNK 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GVL 299 + L++E+ LVE + G FD +YL LP+EL+ LT+ +Q+ F ++ + + Sbjct: 229 CSFEINNALVDEVTNLVETPVILKGKFDSEYLVLPDELLNLTMVNHQRYFPMKSEQENKM 288 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 N F+ V+N D I +GN +V+ ARL DA FW +++ Sbjct: 289 INSFLFVAN--NFDNKNLITKGNEKVIDARLSDAKFFWDKNKR----------------- 329 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSK 419 + L +++ +L+ +VF+ K+GT ++ RIR L IA I A+ + A + K Sbjct: 330 ---QNLVKQVTKLN--SIVFYQKLGTLYDKTQRIRQLSSVIADTIGANKEDTEIAGSICK 384 Query: 420 ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSL 479 ADL +++V E+PELQG IG+ +A+ Q + +AI+ H P GP VP KISI V++ Sbjct: 385 ADLVSDLVGEYPELQGTIGRYFALEQGFSQEISNAIQNHYLPLGPSGKVPKEKISIAVAV 444 Query: 480 ADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL--- 536 ADK+DTLI F+ I+EKP+ SKDP+ALRRA G++R+I ENKI + L + + + + Sbjct: 445 ADKIDTLIGFFGIDEKPTSSKDPFALRRACFGVLRLITENKISLSLKEILNNSKNLYLSQ 504 Query: 537 ---------------FFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTIVDLIKHLNEF 580 FF +R K+ L D+ R D+ +IL +D+ I+ I L++ Sbjct: 505 NYQLSNEKVIEDLFQFFIERFKINLKDKGARLDVTNSILGNNRSDDFYLIMKNINELSKC 564 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 ++G+ + KR IL + E +E + +++ + Sbjct: 565 LKKSQGQDAISIYKRSKNILDQSN-QEEEFFGNPDNVLFQHPSEDEILIKLNEARDYFTT 623 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + LL + + FFD V VN D+++VR NRL LL + + K Sbjct: 624 PSRLRDNEKTITLLSELKPMTDNFFDNVKVNDDNQQVRKNRLELLTLLCKTFEKFTDFSK 683 Query: 701 I 701 + Sbjct: 684 L 684 >gi|79436767|ref|NP_190394.3| EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase [Arabidopsis thaliana] gi|75154114|sp|Q8L785|SYGM2_ARATH RecName: Full=Glycyl-tRNA synthetase 2, chloroplastic/mitochondrial; AltName: Full=Glycine--tRNA ligase 2; Short=GlyRS 2; Flags: Precursor gi|22531150|gb|AAM97079.1| glycine--tRNA ligase precursor, chloroplast (edd1) [Arabidopsis thaliana] gi|45773748|gb|AAS76678.1| At3g48110 [Arabidopsis thaliana] gi|332644848|gb|AEE78369.1| glycyl-tRNA synthetase 2 [Arabidopsis thaliana] Length = 1067 Score = 613 bits (1582), Expect = e-173, Method: Composition-based stats. Identities = 176/720 (24%), Positives = 335/720 (46%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F++EI +EE+P + A+E L ++++ LL+ + + + ++ + TP RL + + +S Sbjct: 386 FIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKAFGTPRRLVVLVDAMSSKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP G KA +GF R G+ +K K + A + +P Sbjct: 446 LEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPLEK--LYRKVSGKTEYVHARVTEP 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + ++ Sbjct: 504 ARLALEVLSEDLPGILAKISFPKSMRWN------SSVMFSRPIRWVMAL-----HGDLVV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN++ G R A + VQ+ + Y + + + ++ E R+ IL ++ LA Sbjct: 553 PFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKSNALA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +V LV ++LL E+ LVE +G F + +L LPEEL+ + ++ +QK F Sbjct: 613 KSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFSIIDES 672 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D + Sbjct: 673 GQLLPYFIAVANGAINE--DVVKKGNEAVLRARYEDAKFFYEVDTRKRFSEF-------- 722 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDR 413 R + ++FH K+GT ++++R++ + K+ + D L V+ Sbjct: 723 --------------RDQLQGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVED 768 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + +P Sbjct: 769 AASLAMSDLATAVVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDA 828 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 + +++ D+LD+L+ +A +PS + DP+ LRR + G+++I++E ++ + +E Sbjct: 829 GMVLAIGDRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELAA 888 Query: 534 LI--------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F RL+ L D + +++ ++L +N + Sbjct: 889 SVQPTKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVLAERGNNPCLAARTAYKTEK 948 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + + R +I+ K+ + +E+ E+ L++ + I Sbjct: 949 LSKGEMFPKIVEAYSRPTRIVR---GKDVGVGVEVDENAFETPQERTLWSTYTSIKDRIH 1005 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + +I + EP+E FF+ V V V++ VR NRL+LL I N+ VI++ Sbjct: 1006 TGIEIEDFTEISM---QLVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDLS 1062 >gi|239618467|ref|YP_002941789.1| glycyl-tRNA synthetase, beta subunit [Kosmotoga olearia TBF 19.5.1] gi|239507298|gb|ACR80785.1| glycyl-tRNA synthetase, beta subunit [Kosmotoga olearia TBF 19.5.1] Length = 683 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 188/721 (26%), Positives = 339/721 (47%), Gaps = 72/721 (9%) Query: 5 LLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSP 64 LLEI EEIPA ++ L LL+++ + Y N++ + R + +KGL Sbjct: 7 LLEIGIEEIPASEVKSIVSQINGRLPNLLEQQRINYSNIKTFIASRRFGVLIKGLPEKQE 66 Query: 65 EKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK-PK 117 + +E+ GP + G KA++GFLRS T+ D ++++ KG Y+ + +K Sbjct: 67 DYYQEKRGPAEKVAFKDGKPTKALEGFLRSNN-ATVDDVEVRE--FKGTSYIFLKKKVEG 123 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + VL + I + + K MRW ++RP++ ++ + +++++ Sbjct: 124 KKTSLVLSEVFKELIHGLQFKKPMRWGNGE-----HKFVRPVRWLVALF-----DDEVLN 173 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L+L + + +YGHRF IKV S ++Y L+EA+V+ D + R ++N+ R+ Sbjct: 174 LELFDKKASDTSYGHRFF-FDKIKVTS-ENYFETLKEALVIADFDERAQMVINELERIEK 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 + + D +L++E+ + E +G F KYL LP+E+I +TI+ +Q+ F Sbjct: 232 EKNVTIPRDAELIDEVTCITELPTAVLGKFLPKYLYLPDEVIIVTIRHHQRTFPVYEGNK 291 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N F+ + +D + +G V+ ARLEDA +++RD Sbjct: 292 -LTNSFVAFQDG-PADPKGNVRRGYEEVINARLEDAHFYFERDIQ--------------- 334 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA---DVALVDRA 414 KPL+ + L ++F +GT E+ R+R L K IA+ ++A + +DR Sbjct: 335 -----KPLEAYVEYLK--GILFQRGLGTLYEKTQRVRSLSKYIAKQLNAKPVEEEAIDRT 387 Query: 415 IVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKIS 474 +L+KADL T +V+EFPELQG +G+ YA+ E+ I+EH +P VP Sbjct: 388 ALLAKADLTTRVVQEFPELQGIMGRIYALESGESSEVAWGIQEHYEPLN---EVPETLTG 444 Query: 475 ITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNL 534 V +AD++DTL+ + + PSGSKDPY LRR I + ++ L + E Sbjct: 445 AVVGVADRIDTLVGNFLLGNIPSGSKDPYGLRRKLSQIFETMYAFGWNMNLIKLFEKAAD 504 Query: 535 IL-------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFF 581 L F R + +L ++ ++ A+ N + K ++E Sbjct: 505 NLGEGYEKISTTLEPFIKSRYEAFLLEKGYSINIARAV-SMWWKNPYLGELVAKAISEII 563 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQES 641 +K L++ +R+ I + S + L EAE L+ + I+++ Sbjct: 564 GRDDFDKLLVAYQRVHNISKKHD------SNKFDGSLFLKEAEVNLFNAYVEALDKIKKA 617 Query: 642 MDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ + + L ++ EPI+ +FD+V V ++R NRL L+ + + + ++ + Sbjct: 618 LEKRDFSVALKTLIALKEPIDEYFDEVFVMDSQVDIRLNRLGFLKALDELFFEIADLSYL 677 Query: 702 V 702 + Sbjct: 678 I 678 >gi|220909945|ref|YP_002485256.1| glycyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7425] gi|219866556|gb|ACL46895.1| glycyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7425] Length = 731 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 196/734 (26%), Positives = 317/734 (43%), Gaps = 97/734 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKG 58 M FLLE+ +EE+PA A E ++ LK + ++ TP RL + +KG Sbjct: 1 MFSFLLEVGTEELPASFVASALEQWRSLIPNSLKANLLQGDTTTVQVLGTPRRLAVLIKG 60 Query: 59 LSPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 L P++ EE GP V G KA GF RS + D KG+ Sbjct: 61 LPQRQPDQEEEIKGPSVQAAFKDGQPTKAAMGFARSRNVDIADFDIRATD--KGEFVFVR 118 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + R ++L ++P I + + MRW + RP++ ++ +L + Sbjct: 119 QKITGRPTAELLTELIPQWIFGLEGKRFMRWGDGD-----LRFSRPIRWLVALL-----E 168 Query: 173 EKIIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 ++++ L L+ I I++GHR P P+ + + Y+ LE A VL+D + R+ I Sbjct: 169 DQVLPLTLENGATTISSDRISWGHRVLHPEPVTLLQAEDYLTALENAYVLVDSKQRQERI 228 Query: 229 LNDAHRLASAVGLELVEDK--DLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 L + V + D DL+EE+ LVEW +G FD ++L LP+E+ +KT+ Sbjct: 229 LEQLQVIEKEVKGIVPPDAINDLIEEVTHLVEWPNAVLGKFDAEFLTLPKEVTITVMKTH 288 Query: 287 QKCFVTRTR-------EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 Q+ F R E +L FI +SN + I GN+RV+ ARL DA F+ Sbjct: 289 QRYFPVFDRAAFSQREELILLPYFITLSNGDPAQAN-LIALGNARVIRARLADAKFFYDA 347 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ ++PL+ + RL V F +G+ ++V R+ + + Sbjct: 348 DR--------------------AQPLEAYVPRLG--QVTFQQALGSMYDKVQRMLAIAQF 385 Query: 400 IAQLI---DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + I + + + RA +L KADL T++V EFPELQG +G +YA L E +AI Sbjct: 386 VCAQIKVPETEQQQILRATLLCKADLVTQMVGEFPELQGIMGADYARLSGEAAMVAEAIA 445 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 H P T+ + V+L D+LDTL++ + + PSGS DP+ALRRA IIRII Sbjct: 446 VHYLPPAIFTKTDTHLVGEVVTLVDRLDTLVSIFGLGLIPSGSSDPFALRRAANLIIRII 505 Query: 517 LE------------------------NKIDIPLSQFIEDQNLILFFHDRLKLYL-HDRDI 551 + K + L FF R++ L D I Sbjct: 506 YKIASKNPQLQLNLQQLLQQCIEQFTAKFAKSTPAATLLEQLEDFFLQRIRNTLDEDEQI 565 Query: 552 RHDLIEAILRPEN--------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE 603 +DLI AIL + ++ +D K L + ++ + R ++ Sbjct: 566 DYDLINAILGEADPEYTQRALASIPDTIDRAKFLQQMRQDGSLDRIYETVNRASRLARQG 625 Query: 604 --EKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 + + + I + L +E+ Y + D + + + Y Q+ + + +I + Sbjct: 626 DLDTVTLDPASVIQTKLLKQPSEQAFYQALVDLLPQTKAAQASRNYRQLVEAIAAIAPTV 685 Query: 662 EIFFD---QVLVNV 672 FFD VLV Sbjct: 686 SRFFDGPESVLVMD 699 >gi|2654226|emb|CAA05843.1| aminoacyl-t-RNA synthetase [Arabidopsis thaliana] Length = 1067 Score = 612 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 176/720 (24%), Positives = 335/720 (46%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F++EI +EE+P + A+E L ++++ LL+ + + + ++ + TP RL + + +S Sbjct: 386 FIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKAFGTPRRLVVLVDAMSSKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP G KA +GF R G+ +K K + A + +P Sbjct: 446 LEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPLEK--LYRKVSGKTEYVHARVTEP 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + ++ Sbjct: 504 ARLALEVLSEDLPGILAKISFPKSMRWN------SSVIFSRPIRWVMAL-----HGDLVV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN++ G R A + VQ+ + Y + + + ++ E R+ IL ++ LA Sbjct: 553 PFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKSNALA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +V LV ++LL E+ LVE +G F + +L LPEEL+ + ++ +QK F Sbjct: 613 KSVNGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFSIIDES 672 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D + Sbjct: 673 GQLLPYFIAVANGAINE--DVVKKGNEAVLRARYEDAKFFYEVDTRKRFSEF-------- 722 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDR 413 R + ++FH K+GT ++++R++ + K+ + D L V+ Sbjct: 723 --------------RDQLQGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVED 768 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + +P Sbjct: 769 AASLAMSDLATAVVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDA 828 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 + +++ D+LD+L+ +A +PS + DP+ LRR + G+++I++E ++ + +E Sbjct: 829 GMVLAIGDRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELAA 888 Query: 534 LI--------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F RL+ L D + +++ ++L +N + Sbjct: 889 SVQPRKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVLAERGNNPCLAARTAYKTEK 948 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + + R +I+ K+ + +E+ E+ L++ + I Sbjct: 949 LSKGEMFPKIVEAYSRPTRIVR---GKDVGVGVEVDENAFETPQERTLWSTYTSIKDRIH 1005 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + +I + EP+E FF+ V V V++ VR NRL+LL I N+ VI++ Sbjct: 1006 TGIEIEEFTEISM---QLVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDLS 1062 >gi|299139033|ref|ZP_07032210.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8] gi|298599187|gb|EFI55348.1| glycyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8] Length = 698 Score = 611 bits (1575), Expect = e-172, Method: Composition-based stats. Identities = 191/718 (26%), Positives = 327/718 (45%), Gaps = 62/718 (8%) Query: 8 IYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKI 67 + E++ K A+ + + L + +R Y TP RL + + G+ + Sbjct: 17 LGREQLIDAALAKEAQSVEP-VTAFLVKH-----VIRSYSTPRRLAVLVCGVREQQADIT 70 Query: 68 EERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIE 121 E+ GP V G A + F R +G+ I KG+ A K R Sbjct: 71 EDVTGPAVKIAFKDGVATPAAEAFARKSGVAVAELRTI--TTPKGEYLAATSVKKGRSAA 128 Query: 122 DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLK 181 +VL + +P I + W K+M W P ++RP+ I+C+L + ++ L Sbjct: 129 EVLASELPKEIAGIYWAKNMYW----RPGKPERFVRPVLWIVCLL-----GDAVVPLTFA 179 Query: 182 EIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV- 239 G +YGHR + P ++ + + Y+ LE V+ D E RR I + AV Sbjct: 180 GRMAGRASYGHRVLSSGEPFEIVAPESYLAQLEGEYVIADVEARRQTIRKALDHVTRAVE 239 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G ED++L++ + L EW V +G F+ YL LPEE++ ++ +QK F G L Sbjct: 240 GARWREDEELVDSVTHLTEWPAVLLGGFESAYLELPEEVLVTVMRDHQKYFAVEDAAGKL 299 Query: 300 ANCFILVSNIQASDGGAAIVQ-GNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 A F+ + NI + I++ GN RV+ AR DA FW+ DQ Sbjct: 300 APHFLAILNIALDETNEPIIKQGNERVLRARFNDARFFWEFDQR---------------- 343 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-----DVALVDR 413 PL +R+ L+ +V F +G+ + R+R L ++A++ + D + VD Sbjct: 344 ----TPLAERVKLLE--NVTFQKDLGSYAAKSERVRSLAAQLAKVASSRGATVDASAVDE 397 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+K DL TE+V+EF ELQG IG YA Q + + DAI + P + +P + Sbjct: 398 AAKLAKTDLTTELVKEFTELQGVIGGLYAKAQGVSATVADAIYDQYLPASAKDAIPRSFE 457 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-------- 525 + LAD++DT+ +A+ +P+GSKDP+ALRRA ++RI+ E+ + + L Sbjct: 458 GALLGLADRIDTITGMFALGMEPTGSKDPFALRRAANSVVRILAESGLPLTLADVFGVAQ 517 Query: 526 SQFIEDQNLILFFHDRLKLYLHD-RDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSA 584 S+ L FF +R++ YL + R +D+++A++ ++L V + + Sbjct: 518 SEAEVAAKLQAFFAERIEFYLREGRGQAYDVVKAVVAAGAEDLRDAVARAEAVTAVRGGE 577 Query: 585 KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDH 644 + KR+ IL + K I + L +EK L + + ++ Sbjct: 578 DFIAVSAAFKRMKNILDQAQAKGESIPASVDTGLLSDASEKALESTGGRVASDVEALRAK 637 Query: 645 KRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 ++Y + + S+ + FF++V+V + ++R NRL+LL + + +IV Sbjct: 638 RQYSEALTQVASLRPVVNEFFERVMVMAPEADIRANRLALLARTVADFSRIADFSEIV 695 >gi|57242321|ref|ZP_00370260.1| glycyl-tRNA synthetase, beta subunit [Campylobacter upsaliensis RM3195] gi|57017001|gb|EAL53783.1| glycyl-tRNA synthetase, beta subunit [Campylobacter upsaliensis RM3195] Length = 662 Score = 611 bits (1575), Expect = e-172, Method: Composition-based stats. Identities = 191/718 (26%), Positives = 333/718 (46%), Gaps = 75/718 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M + L+EI +EE+PA K ++ LLKE + Y+TP RL + Sbjct: 1 MKELLIEILTEELPAIPFLKELPNIKGKWEKLLKEYHLE-AEFDFYYTPRRLVFFHPHFK 59 Query: 61 PHSPEKIEERLGPRVGAGKK------AIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E +G K A F++ G+ C ++ K +Y Sbjct: 60 TKQENSLVEFIGAPKNVAYKDGKLSQAGLSFIQKVGIDETQIC-FREIKGKEVLYYQKEL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K +VL ++ ++ + + KSMRW F +IR +++I C+L E Sbjct: 119 ECKES-SEVLGEMIESFLKSLHFGKSMRWGAYQ-----FEFIRAIRNIACVL-----GED 167 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ + T+ HR + ++ Y LEE V+LDPE R+ I+ Sbjct: 168 LVKFQSYGVQSSKQTFVHRSVSYEAFAFKNAKEYFELLEENFVILDPEKRKEKIIESFKL 227 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + + L + +D +LLEE+I + E+ +GSF+ ++L +P E+I +++ NQ+ F T Sbjct: 228 IEAKENLNIAQDDELLEEVIAITEYPNALLGSFESEFLEIPSEVIITSMRENQRYFATFD 287 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 E L+N FI+VSN D + I+ GN RV+ ARL DA+ F+K D Sbjct: 288 -EKELSNHFIVVSNAVCKDY-SKIIHGNERVLRARLSDAMFFYKND-------------- 331 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD-R 413 L + + + +++ +GT ++V R + L + + +D D + Sbjct: 332 ----------LQKGLEPEKLSKMLYLDSLGTVMDKVEREKALALLLCKFLDNDKQEAILQ 381 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A+ SKADL T++V EFP LQG +G YA + AI+E P +P+++ Sbjct: 382 AVHFSKADLATQMVYEFPNLQGIMGSYYAEKMGLSYEISLAIKEQYLPNQS--ALPSSEF 439 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 S V+LA K DTL++ ++I + PSG+KDPYALRRA GI++I+L L+ F+++ + Sbjct: 440 SSIVALAYKFDTLLSLFSIGKIPSGTKDPYALRRAANGILKILLHLGKKFDLNAFLKEAS 499 Query: 534 L----------ILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSS 583 F +R+ + I+A+L +N +L+ I +K L E Sbjct: 500 KTYKSFDLNSLYDFILERIYPFYEA---NPSFIKAVLSTKNSDLIHIDTAVKALIELSKK 556 Query: 584 AKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMD 643 + + KR+ I E I+ EAEK+LY +ES+ Sbjct: 557 TNFNENFSTFKRLANIATKNENL-------INESLFENEAEKKLYLAF-------KESLK 602 Query: 644 HKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + Q + L ++ I+ FF+ V++N ++ ++++NR +L+ I N L + +++++ Sbjct: 603 VQNLKQKLESLFALKPFIDEFFENVMINSENEKLKNNRQALIFTIYNEFLKIADIKEL 660 >gi|317177763|dbj|BAJ55552.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F16] Length = 700 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 337/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFSKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDYQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR + I+V + Y LE+ V+LDP+ R+ IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFNFIQVDNPKAYFEVLEKNHVILDPKKRKAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIVVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIITGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREVIIAQYLTQKYASSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELIGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L +F+++ + PSGSKDP+ALRR + G+++II Sbjct: 452 PTSENAPLPSSVFSTIVALSLKLDSLFSFFSVGKIPSGSKDPFALRRLSFGLLKIIAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L +++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFFISLFKESQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|254991890|ref|ZP_05274080.1| glycyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J2-064] Length = 575 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 175/613 (28%), Positives = 299/613 (48%), Gaps = 69/613 (11%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M DFLLEI EE+PA+ + L + LK+ + ++ ++ Y TP RL + ++ + Sbjct: 1 MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEIKTYSTPRRLTVLVEEM 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + ++EE GP G KA GF +S + + KG Y+ + Sbjct: 61 AEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPED---LTFREIKGVEYIYI 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 ++ +L + + + + +P SM W + +IRP+K ++ + Sbjct: 118 KKEVIGEKTTALLPS-LEKVVTSMTFPVSMHWGSND-----LRYIRPIKWLIAMF----- 166 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+II ++ + N + GHRF + Y L E V+++ R+ AI+ Sbjct: 167 GEEIIPFEITGVSTSNTSRGHRFLGKTA-TINQPSDYPNALLEQFVVVNASERKQAIVEQ 225 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L + ++ ED DLLEE+ LVE+ V G+F+K+YL LPEE++ T+K +Q+ F Sbjct: 226 LRELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFP 285 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++EG L F+ V N + + +GN +V+ ARL DA F++ D Sbjct: 286 VFSQEGELLPHFVTVRNGN-HENLDTVARGNEKVLRARLSDADFFYQED----------- 333 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADV 408 L +D+ +A+L ++VFH K+GT E++ R++ + +A ++ D Sbjct: 334 ---------LKITIDEAVAKLQ--NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDK 382 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 + R + K DL T IV EFPELQG +G++YA+LQ E + AI EH P ++ Sbjct: 383 QDIIRLTNIYKFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDL 442 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF 528 P + +++ADKL+TLI F+ +N P+GS DP+ LRR+ G +RII N DIP+ + Sbjct: 443 PQTDLGSLIAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEV 502 Query: 529 IED-------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + + F +RL++ L IRHD+I+A++ + + + Sbjct: 503 VSRIVDMERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQ 562 Query: 570 IVDLIKHLNEFFS 582 ++D + LN+ Sbjct: 563 LIDRAQILNKHAD 575 >gi|157826327|ref|YP_001494047.1| glycyl-tRNA synthetase subunit beta [Rickettsia akari str. Hartford] gi|229558572|sp|A8GQ64|SYGB_RICAH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|157800285|gb|ABV75539.1| glycyl-tRNA synthetase subunit beta [Rickettsia akari str. Hartford] Length = 662 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 222/700 (31%), Positives = 344/700 (49%), Gaps = 61/700 (8%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPA MQ A E I + E + + ++ + P R+ LY L + + EE G Sbjct: 13 IPAFMQKNAEEGYLNIFTQIFAESAI-FAKVQVFVGPRRITLYATHLPKVTLPQEEEIKG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDVLKTIVPVAI 132 P + + + AI+GF + + + K Y V + +R I+++L I+ AI Sbjct: 72 PSIESPEAAINGFCSAHNVSKLELST--KLINNQLYYFFVKKTKEREIKEILPKIIIEAI 129 Query: 133 QKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGH 192 K W KSM W WIRPL++ILCI E ++ L + NITYGH Sbjct: 130 NKYSWAKSMFWGDYK-----IKWIRPLRNILCIFDGE-----VLPLQFGHLTANNITYGH 179 Query: 193 RFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEE 252 R ++V Y L E V+L+ R I LA++ L + ED L+EE Sbjct: 180 RLTDNKKLEVTDFKDYRNKLLENNVVLERIKREEIIKTGLLELANSQNLNIKEDARLIEE 239 Query: 253 IIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQAS 312 + GL E+ V +G +K+L LP+E++ +++T+QK F + G A F+ VSN + + Sbjct: 240 VAGLSEFPVVLLGKIAQKFLELPKEVLIASMRTHQKYFCLFDKTGNFAPYFLFVSNGRFA 299 Query: 313 DGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARL 372 + ++QGN +V++ARL DAL+F+K+D +K L+ R+ +L Sbjct: 300 NA-ELVIQGNEKVLSARLSDALYFYKQDI--------------------AKTLESRLGKL 338 Query: 373 DMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADLCTEIVREFPE 432 + V FHAK+G E++ I + IA + + A L K+DL +E+V EFP+ Sbjct: 339 EA--VTFHAKLGNLREKIEHITDICNYIAP----NNKDLITAAKLCKSDLVSEMVGEFPD 392 Query: 433 LQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAI 492 LQG +G YA + N AI +H KP+G +NV + ++LADKLD+L+ Sbjct: 393 LQGIMGYYYAKYEGLNEEIAAAIRDHYKPQGLSDNVASGNA-ALLALADKLDSLVGLMIA 451 Query: 493 NEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-----------FFHDR 541 E P+GS DPYALRR LGIIRIILENK+++ L+ I + FF +R Sbjct: 452 GEAPTGSGDPYALRRQALGIIRIILENKLELNLNDLIIFSLKLYGNSADKDLITSFFEER 511 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 K Y ++ LI A+L NL+ ++ L EF G++ L + KR I+ Sbjct: 512 AKFYFKNK-YDILLINAVLDL---NLVDTQFKLETLKEFLIEDAGKQLLNAYKRASNII- 566 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 +++I+ + + EK L+ V+ I +S+ K Y + +LL + PI Sbjct: 567 ----GDQKITGLVDASLFSTQPEKDLFEVVQKISPQIIDSIADKDYKRALNLLSFLLTPI 622 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 FFD VLVN D ++ NRLSLLQ I ++ + ++ Sbjct: 623 TSFFDNVLVNDPDPKIAQNRLSLLQNICELLNKIAKFNRL 662 >gi|210135161|ref|YP_002301600.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori P12] gi|238064851|sp|B6JMJ2|SYGB_HELP2 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|210133129|gb|ACJ08120.1| glycyl-tRNA synthetase beta subunit [Helicobacter pylori P12] Length = 701 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 197/734 (26%), Positives = 336/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGTIEVFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKMQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R+ IL + Sbjct: 179 N--IEVKEYGFKTKQATKTHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKRKAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYFAV 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FSQKSQEESPTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYEND------- 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 L KPLD + VVF +GT +++ R + + + Q Sbjct: 349 -------------LKKPLDNAP----LESVVFVQGLGTLKDKMERESTIAQYLTQKYAPS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 LNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSLKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 452 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 ++ L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLEFDLKADLKNLFEKVGIYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S S E L+ Sbjct: 572 IIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSGFSISLFKELQEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 EAFNAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|4678317|emb|CAB41128.1| aminoacyl-t-RNA synthetase [Arabidopsis thaliana] Length = 1067 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 176/720 (24%), Positives = 335/720 (46%), Gaps = 67/720 (9%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F++EI +EE+P + A+E L ++++ LL+ + + + ++ + TP RL + + +S Sbjct: 386 FIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKAFGTPRRLVVLVDAMSSKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP G KA +GF R G+ +K K + A + +P Sbjct: 446 LEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPLEK--LYRKVSGKTEYVHARVTEP 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 RL +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + ++ Sbjct: 504 ARLALEVLSEDLPGILAKISFPKSMRWN------SSVMFSRPIRWVMAL-----HGDLVV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 I GN++ G R A + VQ+ + Y + + + ++ E R+ IL ++ LA Sbjct: 553 PFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEKSNALA 612 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 +V LV ++LL E+ LVE +G F + +L LPEEL+ + ++ +QK F Sbjct: 613 KSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFSIIDES 672 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L FI V+N ++ + +GN V+ AR EDA F++ D + Sbjct: 673 GQLLPYFIAVANGAINE--DVVKKGNEAVLRARYEDAKFFYEVDTRKRFSEF-------- 722 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVAL---VDR 413 R + ++FH K+GT ++++R++ + K+ + D L V+ Sbjct: 723 --------------RDQLQGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVED 768 Query: 414 AIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKI 473 A L+ +DL T +V EF L G + + YA+ + +A+ E PR + +P Sbjct: 769 AASLAMSDLATAVVTEFTALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDA 828 Query: 474 SITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQN 533 + +++ D+LD+L+ +A +PS + DP+ LRR + G+++I++E ++ + +E Sbjct: 829 GMVLAIGDRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELAA 888 Query: 534 LI--------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + F RL+ L D + +++ ++L +N + Sbjct: 889 SVQPTKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVLAERGNNPCLAARTAYKTEK 948 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + + R +I+ K+ + +E+ E+ L++ + I Sbjct: 949 LSKGEMFPKIVEAYSRPTRIVR---GKDVGVGVEVLENAFETPQERTLWSTYTSIKDRIH 1005 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + +I + EP+E FF+ V V V++ VR NRL+LL I N+ VI++ Sbjct: 1006 TGIEIEDFTEISM---QLVEPLEDFFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDLS 1062 >gi|33591304|ref|NP_878948.1| glycyl-tRNA synthetase beta chain [Bordetella pertussis Tohama I] gi|33570946|emb|CAE40413.1| glycyl-tRNA synthetase beta chain [Bordetella pertussis Tohama I] gi|332380706|gb|AEE65553.1| glycyl-tRNA synthetase beta chain [Bordetella pertussis CS] Length = 712 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 189/739 (25%), Positives = 325/739 (43%), Gaps = 75/739 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + K + + + L ++ + + TP RL + L + Sbjct: 8 LLIELFTEELPPKALQKLGQAFAEGVRATLARHHLLADGCAVEPFATPRRLAVRLSAVLA 67 Query: 62 HSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVL 113 +PE+ E+L P G A+ L + GL+ + ++++ K + +A Sbjct: 68 QAPEQAYAEKLMPVKVGLDANGQPTAALAKKLAAKGLEGLDPATLERESDGKQEYLVARG 127 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + L+ + AI +P PK MR+ ++RP ++ + A+ Sbjct: 128 TAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQT-TVKFVRPAHGLVALFGAD---- 182 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 I+ + + G T GHRF + I++ + Y DL E V+ E RR I Sbjct: 183 -IVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAERGRVIASFEARRAEISRLL 241 Query: 233 HRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A +G L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK Sbjct: 242 DEHAQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKY 301 Query: 290 FVTRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSN+Q +D A IV+GN RVV RL DA F++ D+ Sbjct: 302 FPLFDPASGKLTHRFLIVSNMQVADP-ANIVEGNQRVVRPRLADAQFFFETDRK------ 354 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 PL R+ +L +V+H K+GTQ ERV R+R + + IA + D Sbjct: 355 --------------TPLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGIATALGGDA 398 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A DRA +L+KADL + +V EFPELQG +G YA E A+ + R Sbjct: 399 AHCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNRYDAPVD 458 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI---ILENKI---- 521 + T+ +A++++TL+ W+I P+G +DP+ LRRA LG+I + Sbjct: 459 AATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKVS 518 Query: 522 ---DIPLSQFIEDQNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + L + F ++R + L R + +EA++ Sbjct: 519 EDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYERYRNQLIGEHDR-NAVEAVIALA 577 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + KRI +L E + + L A Sbjct: 578 P-PLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLLKKAEGEIG----AVDAALLQDPA 632 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L ++ + + + L EP++ FF V+V DD +R NRL+ Sbjct: 633 EKALAEAVAQLRPQARAQLQAGDFAASLATLAQAREPVDAFFADVMVMADDAALRANRLA 692 Query: 684 LLQYIKNIILIVINVQKIV 702 LL + ++ V ++ ++ Sbjct: 693 LLGQLHGLMNQVADISRLA 711 >gi|308183122|ref|YP_003927249.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori PeCan4] gi|308065307|gb|ADO07199.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori PeCan4] Length = 700 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 198/733 (27%), Positives = 335/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKHALEVGKIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW + S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIIPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYASSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L +++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFHNLIDCNPSIIRSVLNTNERDIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K ++ I + +N S E S E L+ Sbjct: 572 IQKVKALKRFLDDPKNAPKKELLFSAFKRLANINKDRNPNESSEFSTHLFKEPKEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 632 AFNTIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|258611682|ref|ZP_05711600.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL R2-503] gi|258605382|gb|EEW17990.1| glycyl-tRNA synthetase beta subunit [Listeria monocytogenes FSL R2-503] Length = 622 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 175/649 (26%), Positives = 303/649 (46%), Gaps = 70/649 (10%) Query: 76 GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP-KRLIEDVLKTIVPVAIQK 134 G KA GF +S + + KG Y+ + ++ +L + + + Sbjct: 18 GNWSKAALGFAKSQKVAPED---LTFREIKGVEYIYIKKEVIGEKTTALLPS-LEKVVTS 73 Query: 135 VPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEIPCGNITYGHRF 194 + +P SM W + +IRP+K ++ + E+II ++ + N + GHRF Sbjct: 74 MTFPVSMHWGSND-----LRYIRPIKWLIAMF-----GEEIIPFEITGVSTSNTSRGHRF 123 Query: 195 HAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLELVEDKDLLEEII 254 + Y L E V+++ R+ AI+ L + ++ ED DLLEE+ Sbjct: 124 LGKTA-TINQPSDYPNALLEQFVVVNASERKQAIVEQLRELETMENWQIREDDDLLEEVT 182 Query: 255 GLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANCFILVSNIQASDG 314 LVE+ V G+F+K+YL LPEE++ T+K +Q+ F ++EG L F+ V N + Sbjct: 183 NLVEYPTVLAGNFEKEYLELPEEVLITTMKEHQRYFPVFSQEGELLPHFVTVRNGN-HEN 241 Query: 315 GAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDM 374 + +GN +V+ ARL DA F++ D L +D+ +A+L Sbjct: 242 LDTVARGNEKVLRARLSDADFFYQED--------------------LKITIDEAVAKLQ- 280 Query: 375 LDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVDRAIVLSKADLCTEIVREFP 431 ++VFH K+GT E++ R++ + +A ++ D + R + K DL T IV EFP Sbjct: 281 -NIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQDIIRLTNIYKFDLVTNIVGEFP 339 Query: 432 ELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWA 491 ELQG +G++YA+LQ E + AI EH P ++P + +++ADKL+TLI F+ Sbjct: 340 ELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLPQTDLGSLIAIADKLETLIGFFC 399 Query: 492 INEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED-------------------Q 532 +N P+GS DP+ LRR+ G +RII N DIP+ + + + Sbjct: 400 VNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVVSRIVDMERAEGATELPSSDVIK 459 Query: 533 NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLS 592 + F +RL++ L IRHD+I+A++ + + + ++D + LN+ + + + Sbjct: 460 EVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQLIDRAQILNKHADAEWFRPTIEA 519 Query: 593 AKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGD 652 R+ I E +E+ P E E+ L+ + R Sbjct: 520 LTRVVNISKKYED-----GVEVDPSLFENEYEQALFDKLEKLKFDFAGLKIVDR----LK 570 Query: 653 LLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + I+ +FD LV D+ E+++NRL+LL + + I + +I Sbjct: 571 AFADLRTTIDAYFDNTLVMTDNDELKNNRLALLFELASFIKEFAQMDEI 619 >gi|317178678|dbj|BAJ56466.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F30] Length = 701 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 196/734 (26%), Positives = 337/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFSKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW + S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIRVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAV 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FDQKSQEESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYEND------- 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 349 -------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYASS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 FNMPLEKALELIGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I++ Sbjct: 452 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVVHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 ++ L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S E E L+ Sbjct: 572 IIQKVKALKRFLDDPKNAQKKELLFSTFKRLANINKDRNPNESSEFFISLFKESQEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T + ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 EAFNAIKTSVFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|148239654|ref|YP_001225041.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803] gi|147848193|emb|CAK23744.1| Glycyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803] Length = 719 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 180/757 (23%), Positives = 303/757 (40%), Gaps = 96/757 (12%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI +EE+PA A L + LK+ + + + TP RL + ++ L Sbjct: 1 MANTFLLEIGTEELPADFVPSALRQLEQRIRSDLKDLRLAHGELSVTGTPRRLLVVVREL 60 Query: 60 SPHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ E+R GP V G A GF + G+ KD KG A + Sbjct: 61 IDSQPDLEEDRKGPPVSQALVDGRPGPAAIGFAKRCGVDPEDLQ--PKDTPKGPCLFARV 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + P + +L VP I + + MRW + RP++ ++ +L + Sbjct: 119 KTPGQPSSALLGECVPRWIDALQGRRFMRWGCGEQ-----RFSRPVRWLVVML-----GD 168 Query: 174 KIIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I + L + G + GHR +V S + +R L +A V+++ E R I Sbjct: 169 AVIPVTLDTADPVVTSGRTSRGHR-LHEQLQEVNSAEDLLRQLNDAGVMVNREQRAETIR 227 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + + + L +E++ LVE V G ++L LP E+I ++ +Q+ Sbjct: 228 AAIVSESERCDGQADCPESLFQELVDLVESPSVLKGRIADRFLELPPEVIVTVMQAHQRY 287 Query: 290 FVTRTRE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 R + VL F+LVSN S IV GN RV+ ARL DA F Sbjct: 288 VPLRIPQAVSDPLQLQARNVLKPEFLLVSNGVES-ASDTIVSGNQRVLGARLADAEFFLN 346 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 D+ R + V F +G+ +R RI + Sbjct: 347 VDRRQSSEQR----------------------RQSLERVTFAEGLGSLLDRSERISWVMD 384 Query: 399 KIAQLIDAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 ++ + + + RA L K DL ++V EFPELQG +G +Y + + E A+ Sbjct: 385 QLLLALQLEGTVASHARRAAHLCKHDLVCQMVGEFPELQGLMGGKYLLEEGEPRGVALAV 444 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 EH P G + +P + ++LA++++ L++ +A ++P+GS DPYALRRA GI++I Sbjct: 445 AEHYLPAGSGDALPASDAGALLALAERIELLLSIFAKGQRPTGSSDPYALRRAGNGIVQI 504 Query: 516 ILENKIDIPLSQFI------EDQNLILF--------------FHDRLKLYLHDRDIRHDL 555 + +PL + F R+ D DL Sbjct: 505 LWNRGWQLPLQSLFTTASTHWAERFPAFNVEAEALANDLGQLLCQRMVSQFEDDGFAIDL 564 Query: 556 IEAILRPEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 ++A+ ++ + D + L S + + +R ++ + + Sbjct: 565 VQAVCGEGVSTERLLEDPVDARDRLLLLKTLRESGRLQDLQAVVQRASRLAEKGDLPPSK 624 Query: 610 ISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF-- 665 +S+E + +E L + Q K Y ++ L +E FF Sbjct: 625 LSVEGIVDAFLFDSPSEAALLVELEALSPLAQ----AKDYERLAQRLQGAARALEAFFDG 680 Query: 666 -DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D V+V +D VR NRL+LL ++N ++ I Sbjct: 681 SDSVMVMAEDPSVRRNRLNLLGVLRNQASVLARFDHI 717 >gi|33603064|ref|NP_890624.1| glycyl-tRNA synthetase beta chain [Bordetella bronchiseptica RB50] gi|33568695|emb|CAE34453.1| glycyl-tRNA synthetase beta chain [Bordetella bronchiseptica RB50] Length = 712 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 189/739 (25%), Positives = 325/739 (43%), Gaps = 75/739 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + K + + + L ++ + + TP RL + L + Sbjct: 8 LLVELFTEELPPKALQKLGQAFAEGVRATLARHHLLADGCAVEPFATPRRLAVRLSAVLA 67 Query: 62 HSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVL 113 +PE+ E+L P G A+ L + GL+ + ++++ K + +A Sbjct: 68 QAPEQAYAEKLMPVKVGLDANGQPTAALAKKLAAKGLEGLDPATLERESDGKQEYLVARG 127 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + L+ + AI +P PK MR+ ++RP ++ + A+ Sbjct: 128 TAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQT-TVKFVRPAHGLVALFGAD---- 182 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 I+ + + G T GHRF + I++ + Y DL E V+ E RR I Sbjct: 183 -IVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAERGRVIASFEARRAEISRLL 241 Query: 233 HRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A +G L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK Sbjct: 242 DEHAQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKY 301 Query: 290 FVTRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSN+Q +D A IV+GN RVV RL DA F++ D+ Sbjct: 302 FPLFDPASGKLTHRFLIVSNMQVADP-ANIVEGNQRVVRPRLADAQFFFETDRK------ 354 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 PL R+ +L +V+H K+GTQ ERV R+R + + IA + D Sbjct: 355 --------------TPLAARVEQLG--SIVYHNKLGTQLERVERVRAIARGIATALGGDA 398 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A DRA +L+KADL + +V EFPELQG +G YA E A+ + R Sbjct: 399 AHCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNRYDAPVD 458 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI---ILENKI---- 521 + T+ +A++++TL+ W+I P+G +DP+ LRRA LG+I + Sbjct: 459 AATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKVS 518 Query: 522 ---DIPLSQFIEDQNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + L + F ++R + L R + +EA++ Sbjct: 519 EDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYERYRNQLIGEHDR-NAVEAVIALA 577 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + KRI +L E + + L A Sbjct: 578 P-PLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLLKKAEGEIG----AVDAALLQDPA 632 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L ++ + + + L EP++ FF V+V DD +R NRL+ Sbjct: 633 EKALAEAVAQLRPQARAQLQAGDFAASLATLAQAREPVDAFFADVMVMADDAALRANRLA 692 Query: 684 LLQYIKNIILIVINVQKIV 702 LL + ++ V ++ ++ Sbjct: 693 LLGQLHGLMNQVADISRLA 711 >gi|269122522|ref|YP_003310699.1| glycyl-tRNA synthetase subunit beta [Sebaldella termitidis ATCC 33386] gi|268616400|gb|ACZ10768.1| glycyl-tRNA synthetase, beta subunit [Sebaldella termitidis ATCC 33386] Length = 680 Score = 609 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 200/709 (28%), Positives = 331/709 (46%), Gaps = 77/709 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+PAR + +L ++ LKEE + + +++ + TP RL L ++G++ Sbjct: 2 DFLFEIGVEELPARYVDSSEAELKKLMTESLKEERISFGSVKSFSTPRRLALLIEGMAEK 61 Query: 63 SPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-K 115 E ++ GP V A KA +GFL+ I+ + K Y++V + Sbjct: 62 QEELHKKSTGPSVEAAYKDGKLTKAGEGFLKGQNADEADIKIIENEKGK---YISVEKFY 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + ++L ++ A++ + + KSM+WS F + RP+K IL +L K+ Sbjct: 119 AGKDTAEILPDLLNKALKGLTFDKSMKWSDKQ-----FRFARPIKWILALL-----DNKV 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + I T G R A + + ++ Y LE+ V+ D R+ IL Sbjct: 169 LDFTFEGIKASGKTRGMRNFASQDVVINNITEYESILEKNYVIADHNKRKEKILESIREN 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G +++ + LLEE++ LVE+ G F+K YL LPE++I +T++T+Q+ F + + Sbjct: 229 CENDGDQVIINDYLLEEVLNLVEYPYAIKGEFNKNYLELPEDIITITMETHQRYFPVKDK 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G LAN F+L+ N A A+ +GN +V+ RL DA F+ D Sbjct: 289 DGKLANKFVLIRN--APVYSEAVKKGNEKVIEPRLADAKFFYDED--------------- 331 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDR 413 L LDQ + +L +VVF +GT E++ R + I + D + R Sbjct: 332 -----LKVKLDQNVEKLK--NVVFQKDMGTIYEKIQRSEKIADYIISELKLDDKKEDIKR 384 Query: 414 AIVLSKADLCTEIVR--EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 + L+KADL + ++ EF +LQG +G+ YA + E S I EH PR + +P Sbjct: 385 TVYLAKADLVSNVIGEKEFTKLQGFMGEVYARHEGEKESVAKGIFEHYLPRYFGDILPKT 444 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +ADK+DT+ +A+ P+ SKDPYALRRA GI+ + L +DI + I+ Sbjct: 445 IEGAVAGIADKIDTITGCFAVGLIPTSSKDPYALRRAAQGIVSVCLFQNLDIDYDRLIDT 504 Query: 532 QNLI-------------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 I FF RL LY+ ++ DLI ++ E + T+ D Sbjct: 505 TLEIFSENKEIKGKKEEVAAQIKEFFKQRL-LYILSEELDKDLITYVINLE-TKIGTLKD 562 Query: 573 LIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 +K L E + K E + KR+ IL + + + E +L+ I Sbjct: 563 RVKILEELSKTDKFEILVNLLKRVRNILRENKAQGNP----VQEDLFEKAEETKLFDYIK 618 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 + E +R+++I ++L I FFD V+V + E+++NR Sbjct: 619 RLEKTVNE----ERFYEIVNILLENAHIINDFFDNVMVIAEKNEIKNNR 663 >gi|225620191|ref|YP_002721448.1| glycyl-tRNA synthetase subunit beta [Brachyspira hyodysenteriae WA1] gi|225215010|gb|ACN83744.1| glycyl-tRNA synthetase, beta subunit [Brachyspira hyodysenteriae WA1] Length = 697 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 194/740 (26%), Positives = 340/740 (45%), Gaps = 82/740 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI EEIPA + A+ I+ LK G+ + + Y TP RL + + + Sbjct: 1 MKDLLIEILVEEIPADFAYPASVSFKKIIENTLKNNGINFSTVNSYTTPRRLAVLAENIE 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDP---------KK 105 S +++ E GP + GA KA +GFL+S + S I ++ Sbjct: 61 EKSKDEVIEFRGPLFESAFKDGAPTKAGEGFLKSHNIDANSIKNIDENESFDKPYIKEVN 120 Query: 106 GDVYLAVLRKPKR-LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 G Y+ V ++ K + + + + + + + K MRW F+++RP++++L Sbjct: 121 GKKYIFVKKEKKGIETKKLFEEKLESIVSSIDFKKKMRWGNKD-----FAFVRPIRNVLA 175 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECR 224 + +II + I N GHR +P ++ + Y + L E V++ E R Sbjct: 176 LF-----GNEIIKTSVAGIETNNKVTGHRLLSPEFKEINNPKDYEKTLAEKHVVVSREKR 230 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 I+N + G E V K + E ++ LVE + FD K+L +P+E++ + Sbjct: 231 LENIINQLENIEKEHGYEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLTSEMI 290 Query: 285 TNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 +QK F ++G L N F++ +N + I+ GN RV+ ARL D ++ D Sbjct: 291 EHQKYFPLCKKDGTLTNLFVITANQPKT---PQIIAGNIRVLTARLSDGRFLYQEDIR-- 345 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 K +D+ RL+ML +F ++G+ ++V R+ + + +L+ Sbjct: 346 ------------------KGMDEMNERLEML--MFRKELGSVADKVKRLEKNSELLIKLL 385 Query: 405 D--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPR 462 D + +AI K+DL + +V FPELQG +G +A N N AI E +P Sbjct: 386 GYEKDKENILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKSMNLNDDVALAINEQYRPL 445 Query: 463 GPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKID 522 + +P+N +++ DK+D + + + + P+GS+DP ALRR LGII I+ ++K Sbjct: 446 FAADEIPSNDTGKAIAILDKMDNIAAGFYVGDIPTGSQDPNALRRQALGIINILTKSKKH 505 Query: 523 IPLSQFIEDQ------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 I L + IED ++ FF R + D D D + +L Sbjct: 506 INLKKLIEDAINSMPKDARNNKSEDLVKDIFEFFKSRFEN---DIDFAKDSVAGVLSTGI 562 Query: 565 DNLLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE 622 D++ I+ ++ F + LL KRI ++ + N + L E Sbjct: 563 DDMYDAYLKIEAIDAFRKKNEELFSNLLLVFKRIKNMIKSAKDVN------LDESLLKEE 616 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 AEK LY + + + M+++ Y + LL S+ EP++ FF ++VNVDD ++++NR+ Sbjct: 617 AEKSLYNTYKEKLNEVNKLMENREYEKTFALLASLYEPLDKFFKDIMVNVDDEKIKNNRI 676 Query: 683 SLLQYIKNIILIVINVQKIV 702 +LL + I +++ +V Sbjct: 677 ALLSSVDKIFKNMLDFSSLV 696 >gi|208434873|ref|YP_002266539.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori G27] gi|238064852|sp|B5Z7X4|SYGB_HELPG RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|208432802|gb|ACI27673.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori G27] Length = 701 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 199/734 (27%), Positives = 337/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHE-KEPTKDLIMPIVLEFLEDLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR + I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQESFDFIEVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETEHHISIEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAT 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FCQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEND------- 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 349 -------------LKKPLDNAP----LESVVFVQGLGTLKDKMERESIIAQYLTQKYAPS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 LNMPLEKALELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSLKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 452 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 ++ L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLEFDLKADLKSLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSISLFKESQEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T E +D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 EAFNAIKTSAFEGLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWSV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|330867892|gb|EGH02601.1| glycyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 501 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 169/540 (31%), Positives = 259/540 (47%), Gaps = 48/540 (8%) Query: 1 MP--DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M DFL+E+ +EE+P + A+ + L G+ Y + Y P RL + + Sbjct: 1 MSAQDFLVELGTEELPPKTLVSLADAFLAGIEKGLSGAGLTYSAKQVYAAPRRLAVLITA 60 Query: 59 LSPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 L+ P++ GP G +A GF + G+ + + + G Sbjct: 61 LATQQPDRSVNLDGPPRQAAFDADGNPTQAALGFAKKCGVD------LSEIDQSGPKLRY 114 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + +L TIV ++ +P K MRW ++RP + ++ + Sbjct: 115 SQTILGKPTTSLLPTIVEDSLNDLPIAKRMRWGARKE-----EFVRPTQWLVMLF----- 164 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 ++++D + G + GHRFH P +++ S Y+ DL A VL D RR I Sbjct: 165 GDQVVDCTILAQSAGRHSRGHRFHHPQDVRISSPAGYLSDLRAAHVLADFNERRQIISKR 224 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA+ + LL+E+ GLVEW + SF++++L +P+E + T++ NQK F Sbjct: 225 VDELATQQEGTAIVPPSLLDEVAGLVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFC 284 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 EG L FI V+NI++ D A IV GN +VV RL DA F+K+D+ Sbjct: 285 LLDAEGKLLPRFITVANIESKDP-AQIVAGNEKVVRPRLTDAEFFFKQDKK--------- 334 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + L+ RL +VVF A++G+ ++ R+ L IA I D Sbjct: 335 -----------QKLETFNDRLK--NVVFQAQLGSVFDKAERVSKLAAYIAPRIGGDAQRA 381 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA +LSK DL +E+V EFPE+QG G YA E A+ E PRG +PT Sbjct: 382 ARAGLLSKCDLSSEMVGEFPEMQGIAGYYYAKADGEPEDVALALNEQYMPRGAGAELPTT 441 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 V++ADKLDTL+ + I P+GSKDPYALRRA LGI+RI++E K+D+ L + ++ Sbjct: 442 LTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGILRILIEKKLDLNLVETVKF 501 >gi|15645587|ref|NP_207763.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori 26695] gi|3024686|sp|P56454|SYGB_HELPY RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|2314109|gb|AAD08014.1| glycyl-tRNA synthetase, beta subunit (glyS) [Helicobacter pylori 26695] Length = 701 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 200/734 (27%), Positives = 336/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQYFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +D++ IV ++ + + KSMRW S+IRP+ +I + ED Sbjct: 125 IHE-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGEDFS 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 G--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETKHHIIVETDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAT 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FCQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEND------- 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 349 -------------LKKPLDNAP----LESVVFVQGLGTLKDKMERESIIAQYLTQKYISS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 LNMPLEKALELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 452 LPASENAPLPSSVFSSIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 ++ L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLEFDLKADLKNLFQKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSTNLFKEPKEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + + ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 EAFNAIKMNAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|298736070|ref|YP_003728595.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori B8] gi|298355259|emb|CBI66131.1| glycyl-tRNA synthetase beta chain [Helicobacter pylori B8] Length = 701 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 194/734 (26%), Positives = 333/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K+ +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KQPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 G--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAV 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D + Sbjct: 297 FSQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYENDLKKPLDN 355 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 + L+ VVF +GT +++ R + + + Q Sbjct: 356 APLER------------------------VVFVQGLGTLKDKMERESTIAQCLTQKYISS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 LNMPLEKALELVKRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 452 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 ++ L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLEFDLKADLKSLFEKVGVYQSFDLEVLEKFLLERFHNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S S E L+ Sbjct: 572 IIQKVKALKRFLDDPKNARKKELLFSAFKRLANINKDRNPNESSGFSISLFKEPEEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 632 EAFNAIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|296532281|ref|ZP_06895021.1| glycyl-tRNA synthetase beta subunit [Roseomonas cervicalis ATCC 49957] gi|296267397|gb|EFH13282.1| glycyl-tRNA synthetase beta subunit [Roseomonas cervicalis ATCC 49957] Length = 747 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 255/760 (33%), Positives = 371/760 (48%), Gaps = 98/760 (12%) Query: 13 IPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLG 72 IPARMQ +AAEDLS ++ LK G+ Q +R + P RL L + L + +E G Sbjct: 13 IPARMQARAAEDLSRLMGEALKGAGLAPQGVRVFHGPRRLTLLAE-LPAATEAVQDELAG 71 Query: 73 PRVGAGKKAIDGFLRSTGLQTI-----------------------SDCQIKKDPKKGDVY 109 P A +A+ GFL GL + + + KKG Sbjct: 72 PAPEAPDRALAGFLGKLGLGESLVPTLREAAAGAGEGETVLHAEGAVTLVLRREKKGGKL 131 Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 L +P +L I+P +++ PWPKSMRW S F W+RPLK ILC+ Sbjct: 132 LGRSARPAVPTGALLAEIIPGILRRFPWPKSMRWG----GTSNFVWVRPLKRILCLFDGA 187 Query: 170 DAKEKII--DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNA 227 ++ + D + G+ T GHR +P V + Y L V+LDP R Sbjct: 188 VVPFTLVQGEDDGHGLRSGDRTEGHRILSPGDFAVHNFADYAAQLAARHVVLDPVERAKL 247 Query: 228 ILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQ 287 + + LA+A G+E+V D+ L+ E+ GLVEW +G D ++ LP EL+R T++ NQ Sbjct: 248 VRDGVAALAAAEGVEVVPDEGLVAEVAGLVEWPVPLLGRIDDAFMDLPPELMRTTMRVNQ 307 Query: 288 KCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 + F R +G A CF LVSNI A+DGG A+ GN RV+ ARL DA FW D+ Sbjct: 308 RYFALRKPDGTAAPCFALVSNIAATDGGKAVAGGNERVLRARLSDARFFWDLDRKQA--- 364 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD 407 L+ + +LD VVFHAK+GTQG+RV+R+ L +A + AD Sbjct: 365 -----------------LESFLPKLD--SVVFHAKLGTQGQRVARLERLAAWLAPKLGAD 405 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 AL RA L+KADL T +V EFPELQG IG+ YAV E+ +AI H +P GP + Sbjct: 406 AALAARAAKLAKADLATGLVGEFPELQGIIGRYYAVKDGEDSRVAEAIAAHYRPAGPGDA 465 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 VP+ ++I V+LADKLD L F+A+ EKP+GS DP+ALRRA LGIIRI+ EN + + L+ Sbjct: 466 VPSEPVAIAVALADKLDQLAGFFAVGEKPTGSGDPFALRRAALGIIRILRENGLRLDLAD 525 Query: 528 FIEDQNL----------------------------------------------ILFFHDR 541 + + + F +R Sbjct: 526 ALAEAFFGFPQAVGSTAEPEFGMAVAQEAMKAGFQPDPKSAHPPMVAAFAAGLLDFLAER 585 Query: 542 LKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILA 601 L++ L RHD++ A+L +L+ ++ L F G L +++R IL Sbjct: 586 LRVQLRAEGERHDVLAAVLPAGGADLVRLLARAAALRGFLEGEDGANLLAASRRAANILR 645 Query: 602 IEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPI 661 IE+KK+ E L+ E EK L A + + + ++ + L ++ P+ Sbjct: 646 IEDKKDGPHRPETDAALLVAEEEKALSAALDEALPRARAALAAEDDTAAMAALATLRAPV 705 Query: 662 EIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 + FFD+V+VN + ++R NRL LL +++ I V + KI Sbjct: 706 DAFFDKVVVNDPEAKLRRNRLGLLARLRSAIDQVADFSKI 745 >gi|238028590|ref|YP_002912821.1| glycyl-tRNA synthetase subunit beta [Burkholderia glumae BGR1] gi|237877784|gb|ACR30117.1| Glycyl-tRNA synthetase beta subunit [Burkholderia glumae BGR1] Length = 699 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 201/716 (28%), Positives = 333/716 (46%), Gaps = 63/716 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSPHSPEK-IEER 70 P + + + + L L + +Y TP RL + + + +P++ + E+ Sbjct: 19 PPKALARLGDAFAEGLAQRLAARDLTDGAPVFERYATPRRLAVVITNVRAVAPQRQVREK 78 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQ--TISDCQIKKDPKKGDVYLAVLRKPKRLIED 122 + P G + L + G T++D + +D K + + P + D Sbjct: 79 VLPVSVALDAAGQPTAPLAKKLAALGHPNLTVADLERAQD-GKAEAFFVNYSAPGATLAD 137 Query: 123 VLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKE 182 L+ + + K+P PK M + + ++RP+K + + ++ + Sbjct: 138 GLQAALDETLAKLPIPKVMTYQRPDG--TDVQFVRPVKRLTVL-----HGTHVVPVSAFG 190 Query: 183 IPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGL 241 I G+ T GHRF + + + S Y L E+ V+ RR +I A G Sbjct: 191 IDAGDTTLGHRFLSDGLVAIGSASRYADTLREKGRVIAHFADRRESIRTALAEHA--GGD 248 Query: 242 ELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLAN 301 +V + LL+E+ LVEW V+ F+ ++L +P+E + LT++TNQK F G L + Sbjct: 249 AVVMPEWLLDEVNALVEWPVVYACKFEDEFLQVPQECLILTMQTNQKYFALTDAAGKLRS 308 Query: 302 CFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDL 361 F++VSNI+ + I+ GN RVV RL DA F++ D+ Sbjct: 309 RFLIVSNIETATPAE-IIDGNERVVRPRLADAKFFFETDKK------------------- 348 Query: 362 SKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKAD 421 PL R+ RL +VV+H K+G+Q RV RI L ++IA + AD AL RA L+KAD Sbjct: 349 -TPLVDRVPRL--ANVVYHNKLGSQLARVERIESLAEQIAPAVGADAALARRAARLAKAD 405 Query: 422 LCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLAD 481 L T++V EFPELQG +G YA E A EH +PR + +P +S V+LAD Sbjct: 406 LLTDMVGEFPELQGTMGTYYARHDGEADEVAVACTEHYQPRFSGDALPAAPVSTAVALAD 465 Query: 482 KLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--------- 532 KL+T++ W I P+G KDP+ALRR LG++R+++E ++ + L + Sbjct: 466 KLETIVGIWGIGLAPTGEKDPFALRRHALGVLRLLVEKQLPLDLRGLLRTTYASFAGIAG 525 Query: 533 ------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 + FF DRL+ L +R I+A+L E + ++ + + EF A+ Sbjct: 526 VAESTDAIYAFFLDRLRGLLRERGYSTGEIDAVLGLEPSRVDDLIARLDAVREFTRLAEA 585 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 + KRI IL +K E+ L AE+ L A ++ +Q + + Sbjct: 586 GALAAANKRISNIL---KKSEGGAPGEVDAALLAEAAEQALAAELAQVAPRVQAQLAARD 642 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 Y L ++ P++ FF+ V+VN +D +R NRL+LL + + V ++ K+ Sbjct: 643 YTGALSALAALRAPVDTFFNDVMVNAEDPALRANRLALLGALHQQMNCVADISKLA 698 >gi|311087596|gb|ADP67675.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 682 Score = 608 bits (1568), Expect = e-171, Method: Composition-based stats. Identities = 208/702 (29%), Positives = 341/702 (48%), Gaps = 62/702 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y + LE+ ++ D R+ I+ D + Sbjct: 174 PGDVFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDRKV------------ 340 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV RA Sbjct: 341 --------KLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTPIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 K+Y+ I + S PI FF +V + D ++R NR Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKIYHSDSKIRLNR 669 >gi|119897077|ref|YP_932290.1| glycyl-tRNA synthetase subunit beta [Azoarcus sp. BH72] gi|229470694|sp|A1K3J8|SYGB_AZOSB RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|119669490|emb|CAL93403.1| Glycyl-tRNA synthetase, beta chain [Azoarcus sp. BH72] Length = 695 Score = 607 bits (1567), Expect = e-171, Method: Composition-based stats. Identities = 199/715 (27%), Positives = 338/715 (47%), Gaps = 64/715 (8%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIY--QNMRQYWTPHRLFLYLKGLSPHSPEKI-EER 70 P + + E + + LK G+ R + +P R+ + + G++ + K E+ Sbjct: 16 PPKALPRLGETFATKIAEGLKARGLAAADGAFRWFASPRRIAITMAGVAAEAAAKEVTEK 75 Query: 71 LGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVLRKPKRLIEDV 123 L P G A+ + + G+ + ++ K + P + +V Sbjct: 76 LMPVAVALDADGKPTPALLKKMEAKGIPASAVPAFERRMDGKAEALFHTAVVPGARLAEV 135 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L IV A++ +P PK MRW + +++RP+ ++ + +++ + ++ Sbjct: 136 LAAIVHDAVKALPIPKVMRWGDGDA-----TFVRPVHKLVML-----HGAEVVPGRVLDL 185 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYI-RDLEEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G T GHRF + I + + D Y L E V+ D RR I A+ +G + Sbjct: 186 DAGRSTRGHRFMSRGEIDIATADAYEPTLLAEGKVVPDFAERRADIERQLLAEAARLGAQ 245 Query: 243 LVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLANC 302 L + DLL+E+ LVE V++G F+ ++L +P+E + LT++ NQK F G L N Sbjct: 246 LDDYTDLLDEVTALVEHPTVYVGEFEAEFLAVPQECLILTMRANQKYFPLFDAAGKLQNR 305 Query: 303 FILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLDLS 362 F++VSN++ D IV GN+RVV RL DA F++ D+ + Sbjct: 306 FLIVSNMRMEDPV-NIVTGNARVVRPRLSDARFFFETDKKH------------------- 345 Query: 363 KPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKADL 422 LD R+ RL +VV+H K+G+ ERV R+ L KIA + +D A RA L+KADL Sbjct: 346 -KLDSRLPRL--ANVVYHNKLGSVLERVERLEALAGKIAARLGSDEAAARRAARLAKADL 402 Query: 423 CTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLADK 482 +E+V EFPELQG +G+ YA+ E DA++ H +PR + +P ++ V+LADK Sbjct: 403 VSEMVGEFPELQGIMGRYYALHDGEGAVVADAVQAHYQPRFAGDALPAGNVAAAVALADK 462 Query: 483 LDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP----------------LS 526 LD L+ F+ I P+G KDP+ALRRA LG++RI++E + + L+ Sbjct: 463 LDALVGFFGIGMVPTGDKDPFALRRAALGVLRILMEAPLPLDLAALVADAAAGFKPGLLT 522 Query: 527 QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKG 586 L+ F +RLK L + I+A+L + + + + F + + Sbjct: 523 ADGFQAQLLDFMRERLKNLLRESGGEVAAIDAVLALAPTRIDLVPAKLAAVEAFRALPEA 582 Query: 587 EKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKR 646 E + KRI IL E E L +AEK L+ + + ++ + ++ Sbjct: 583 EALAAANKRIVNILKKAEGAPGEP----DVALLQEDAEKALFHRVIEIAPLVKSHVANED 638 Query: 647 YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 Y +L + ++ FFD V+V ++ R NRL+LL + ++ V ++ ++ Sbjct: 639 YTDALCVLAGLRAEVDAFFDGVMVMAEEPLTRQNRLALLAQLAGLMNQVADISRL 693 >gi|300871578|ref|YP_003786451.1| glycyl tRNA synthetase subunit beta [Brachyspira pilosicoli 95/1000] gi|300689279|gb|ADK31950.1| glycyl tRNA synthetase beta subunit [Brachyspira pilosicoli 95/1000] Length = 695 Score = 607 bits (1567), Expect = e-171, Method: Composition-based stats. Identities = 190/738 (25%), Positives = 345/738 (46%), Gaps = 80/738 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI EEIPA + A+ I+ LK G+ ++++ Y TP RL + ++ + Sbjct: 1 MKDLLIEILVEEIPADFAYPASMSFKKIMEDTLKNNGISFKSIIAYTTPRRLSVLVEEVE 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGD------- 107 S ++I E GP + G+ KA +GFL+S + I + K+D K Sbjct: 61 EKSKDEIVESRGPLLESAIKDGSLTKAGEGFLKSHNIDNIKNIDEKEDFNKAYIKEVGGK 120 Query: 108 -VYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCIL 166 K + + + ++ + K+ + K MRW F+++RP++++L + Sbjct: 121 KYLFVKKEKKGVDTKKLFEEVLEDIVSKIDFKKKMRWGNKD-----FAFVRPIRNVLALF 175 Query: 167 VAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRN 226 ++I + I N GHR +P ++ + Y + L E V++ E R Sbjct: 176 -----GNEVIKTTVAGIETNNKVTGHRLLSPEFKEINNPKDYEKTLAEKHVIVSREKRLE 230 Query: 227 AILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTN 286 I+ ++ +G E V K + E ++ LVE + FD K+L +P+E++ + + Sbjct: 231 NIVAQLEKIEKELGFEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLTSEMIEH 290 Query: 287 QKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPN 346 QK F ++G L N F++ +N + I+ GN RV+ ARL D ++ D Sbjct: 291 QKYFPLCKKDGSLTNIFVITANQPKT---PQIIAGNIRVLTARLSDGRFLYQEDIR---- 343 Query: 347 LSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID- 405 K +D+ RL ML +F ++G+ ++V R+ + + +L+ Sbjct: 344 ----------------KGMDEMNERLQML--MFRKELGSVADKVKRLEKNSELLIKLLGY 385 Query: 406 -ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 D + +AI K+DL + +V FPELQG +G +A N N AI E +P Sbjct: 386 DKDKENILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKSMNLNDDVALAINEQYRPLFA 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +N+P+N +++ DK+D ++ + + + P+GS+DP ALRR LGI+ I++++K + Sbjct: 446 TDNIPSNDTGKAIAILDKMDNIVAGFYVADIPTGSQDPNALRRQALGIVNILIKSKKHVN 505 Query: 525 LSQFIEDQ------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN 566 L + IED ++ FF R + D D D + +L D+ Sbjct: 506 LKKLIEDSINSMPKDARVNKSNDLLNDIFEFFKSRFEN---DIDFAKDSVAGVLSTGIDD 562 Query: 567 LLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 + I+ ++ F + LL KR+ ++ ++ N + L EAE Sbjct: 563 MYDAYLKIEAIDAFRKKNEELFSNLLLVFKRVKNMIKSAKEVN------LDESLLKEEAE 616 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 K LY + + + + M+ + Y + LL S+ EP++ FF ++VNVDD ++++NR++L Sbjct: 617 KSLYNIYKEKLNEVNKLMEKREYEKTFALLASLYEPLDKFFKDIMVNVDDEKIKNNRIAL 676 Query: 685 LQYIKNIILIVINVQKIV 702 L + I +++ +V Sbjct: 677 LSSVDKIFKNMLDFSSLV 694 >gi|34556652|ref|NP_906467.1| glycyl-tRNA synthetase subunit beta [Wolinella succinogenes DSM 1740] gi|34482366|emb|CAE09367.1| GLYCYL-TRNA SYNTHETASE BETA CHAIN [Wolinella succinogenes] Length = 682 Score = 607 bits (1567), Expect = e-171, Method: Composition-based stats. Identities = 195/726 (26%), Positives = 330/726 (45%), Gaps = 78/726 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI EE+PA + L LL++ + ++TP RL L + Sbjct: 5 LLIEIGIEELPAIPFLRELPHLLSKWNTLLQKYRME-SPFELFYTPRRLVLLSQAFPLEQ 63 Query: 64 PEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK 117 PE E GP + GA KA + F G+ K+ K +V Sbjct: 64 PELKEALFGPPLEIAFKEGAPTKAAESFAAKCGVSVSELGSATKEGK--EVLFYSKTSAG 121 Query: 118 RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIID 177 + +L ++ I + + KSMRW + H ++IRP++ + + E +I Sbjct: 122 ESAKRLLPLMIEEWIASLNFGKSMRWGSLHE-----NFIRPVRWLGIM-----HGENLIP 171 Query: 178 LDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 L I +TY HR + P + + ++ L + V+LDP+ RR IL + + Sbjct: 172 ATLFGISSQKLTYVHRIDSFEPQPYEDIASFLALLAQKGVILDPKVRREKILQEIRDIEE 231 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG 297 G+ + D DLLEE++ + E+ +G F+ ++L LP E+I ++K NQ+ F + Sbjct: 232 REGVSVELDTDLLEEVVAITEYPTALLGHFEARFLELPPEVIITSMKENQRYFALYQGDK 291 Query: 298 VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKF 357 L N FI+VSN ++ + IVQGN +V+ ARL DAL F++ D N L+E Sbjct: 292 -LYNGFIVVSNARSQNA-KLIVQGNEKVLRARLSDALFFYQNDLKNGLLTERLQE----- 344 Query: 358 NLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV--------- 408 V F +G+ ++ R + + L + + Sbjct: 345 -------------------VTFVEGLGSMAQKSERETKIALYLFDLYASKLFASSPKNQE 385 Query: 409 ---ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPL 465 L+ A L+KADL +E V EF ELQG IG ++ +A++E P+G Sbjct: 386 ELRTLMQEAATLAKADLMSETVYEFTELQGTIGYYLGKALGKDPLVYEALKEQYLPKGED 445 Query: 466 ENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL 525 +P++ S ++LA +LD L+ +++ P+GSKDP+ALRRA G++RI+ + KI + L Sbjct: 446 SELPSSPFSAILALAHRLDNLMGLFSLGRIPTGSKDPFALRRAASGVLRIVWKQKIPLDL 505 Query: 526 SQFIEDQNLIL----------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 S + + + F +R++ L I A+ NLL + + I+ Sbjct: 506 SIVLPELAPLYKPFALKELEGFILERIESLLS---TNASFIRAVAMGGERNLLFVGEKIE 562 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L+ SS++G+ + KR+ I + + EI P++L E EKRL+A + Sbjct: 563 ALSALLSSSEGKSLSTTFKRVANITKGMDMGDLP---EIKPEWLECEEEKRLFAEFNQVS 619 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 S + L + EP++ FFD VL+N D+ ++ NR +L+ +I L + Sbjct: 620 QATHPSALEE-----LSALLKLKEPLDQFFDHVLINCDNTLLKKNRQALIAHIYQAFLHI 674 Query: 696 INVQKI 701 ++++I Sbjct: 675 ADIKEI 680 >gi|260891272|ref|ZP_05902535.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia hofstadii F0254] gi|260858948|gb|EEX73448.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia hofstadii F0254] Length = 678 Score = 607 bits (1567), Expect = e-171, Method: Composition-based stats. Identities = 204/723 (28%), Positives = 352/723 (48%), Gaps = 73/723 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI EE+PAR +A +DL I+ LK E + + + + TP R+ +K L+ Sbjct: 2 NFLFEIGLEELPARYVDQAEKDLKKIIENELKAERIKFSGIESFSTPRRVTAIIKDLAEK 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + ++ +GP V G KA +GF++S G TI D +I ++ KG Sbjct: 62 QDDLDKKSVGPSVEIAYKEGQLTKAGEGFVKSQG-ATIDDIKIVENE-KGKYISIEKFIA 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L I+ AI+K+ + KSM+W+ F ++RP+K + + +I+ Sbjct: 120 GKNTREILPEILKNAIKKIEFEKSMKWADR-----TFRFVRPIKWFVTLFD----NGEIL 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + GN T G R+ A I++ + Y + + E V++D E RR IL Sbjct: 171 PFEFEGLKGGNKTRGMRYFASQDIEINNPLDYEKIMLENFVIVDGEKRREEILKSIRENG 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G + +K LL+E++ +VE+ G F K YL LPE++I +T++T+Q+ F + ++ Sbjct: 231 EKDGDTAIINKYLLDEVVNVVEYPYAIKGEFSKDYLKLPEDIITITLETHQRYFPVKDKD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+N FI++ N A + + +GN +VV RL DA F+ D N Sbjct: 291 GKLSNKFIVIRN--APEYSETVKKGNEKVVEPRLADAKFFFDEDLKN------------- 335 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 + +L +V F +GT E+V R + + + ++ + + R Sbjct: 336 -------KFADNVEKLK--EVTFQKDMGTIFEKVKRSEKIAEYLISELNLNDKKKNIIRT 386 Query: 415 IVLSKADLCTEIVR--EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ EF +LQG +G YA Q E+ I EH PR + +PT Sbjct: 387 VDLAKADLVSNVIGEKEFTKLQGFMGSVYAEKQGEDKDVALGIFEHYLPRYQGDELPTTV 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 +ADK+DT+I +A+ KP+ SKDPYALRRAT GII++ L +K+ + IE Sbjct: 447 EGAIAGIADKMDTIIGCFAVGLKPTSSKDPYALRRATQGIIQVTLNSKLSFDYKKLIEKA 506 Query: 533 NLI-----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 I FF R+ L ++ + DLI + E+ N++ + + Sbjct: 507 YEIFSADKKVLEKDVVKDVTEFFKQRIINVLSEK-YQKDLINYEINLES-NVVELDKKLS 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + + E + KR+ I+ K + +L I LE EK L+ + + Sbjct: 565 ELLKLSQTENFEILINLLKRVKNIV----KDEKNENLNIDSTLFELEEEKTLHNLANQL- 619 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ES+++ + + L + I FFD V++NVD++++++NR++LL+ ++ I + Sbjct: 620 ----ESIENTDFSNYIETLLNNASTINQFFDNVIINVDNKKLKENRIALLKKLEISIDKM 675 Query: 696 INV 698 IN+ Sbjct: 676 INI 678 >gi|313884232|ref|ZP_07817998.1| glycine--tRNA ligase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312620679|gb|EFR32102.1| glycine--tRNA ligase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 685 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 191/729 (26%), Positives = 333/729 (45%), Gaps = 77/729 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 ++LLEI EEIPAR ++ L + L + + + +++Y TP RL + + GL+ Sbjct: 3 HNYLLEIGMEEIPARYLLSLSQQLKERMANFLNDNRLEFDAIQEYATPRRLAVLVTGLAD 62 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + E+ GP + G KA GF G T D +D D Sbjct: 63 KQADLSEQAKGPALKIAKDDQGQWTKAAQGFAHGQGGTT--DDLFVQDLNGEDYVFINKF 120 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + DVL V + + +P +M W ++IRP+ ++ +L ++ Sbjct: 121 QAGESSRDVLNG-VESVVSGMTFPVTMHWHDYQ-----INYIRPVHWLVSLL-----DQE 169 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I D + N + GHRF + + D Y LE+ VL D R+ I Sbjct: 170 VIPFDFAGVTASNGSRGHRFLGHDLV-IAQADQYEASLEKEFVLADFHKRQAVIEAQIKE 228 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 +A ++ D+DLLEE+ +VEW F G F++KYL +P+ ++ +K +Q+ F Sbjct: 229 IADQNHWQVPIDQDLLEEVTAIVEWPTAFYGDFEEKYLEIPDMVLITAMKDHQRYFYALD 288 Query: 295 REG-VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + G L FI V N A + +V+GN +V+ ARLEDAL F+K D Sbjct: 289 QAGEKLQAIFISVRNGDA-NHLENVVRGNQKVLKARLEDALFFYKED------------- 334 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA----DVA 409 L ++ +A+LD V H K+G+ ++ +R+ + +A ++ D+ Sbjct: 335 -------LKGSIETYVAKLD--HVNEHYKLGSLADKQARVGKILDLLAVKVNQIDKNDLE 385 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 A + K DL T +V EF ELQG++G YA ++ AI P +P Sbjct: 386 TAKMAAKMYKFDLMTGMVGEFDELQGQMGAWYARQFGQSDQVAQAIASQYLPTTAGGQLP 445 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 K +++ADKLD+L+ ++A++ P+GS DPYALRR +G++ I+ + + L Sbjct: 446 ITKAGALLAMADKLDSLVQYFAVDLIPTGSNDPYALRRQAMGVVEIMADQAWSLDLVDLF 505 Query: 530 ED-------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 +D NL F R++ L ++ D+IEA+L + N++ I++ Sbjct: 506 QDILAHFNLSDSELLNNLKEFMAARMEQQLAKLNLNFDIIEAVLAGDFLNVVHILEAGPV 565 Query: 577 LNEFFSSA--KGEKFLLSAKRIFQI-LAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L F + + S R+ + L ++E K+ +++ E+E+ L+ + D Sbjct: 566 LQAFKNQEPQAYRNLVESLSRVLNLGLTVKEAKDLDLN------LAQSESEQVLFDAVKD 619 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 ++ D ++ PI FF+ +VN D +++DNR +L+ Y+ ++ Sbjct: 620 LNYEADSM------AELLDEFKALVTPIGDFFENNMVNADQADIKDNRYALMAYLSRYVM 673 Query: 694 IVINVQKIV 702 ++N QK++ Sbjct: 674 QMMNPQKLI 682 >gi|317009626|gb|ADU80206.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori India7] Length = 701 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 197/734 (26%), Positives = 335/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ ++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYREMPKKLHALFQKRALEVGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ +V ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPVVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETKHCIIVETDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAT 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FCQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEND------- 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 349 -------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYISS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 LNMPLEKALELVKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 452 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 ++ L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFHNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSTSLFKESQEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 EAFNAIKMSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|308063798|gb|ADO05685.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Sat464] Length = 700 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 336/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R+ IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKRKAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAV 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ +L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPILHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYASSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L ++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERGIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFFISLFKESQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|154148492|ref|YP_001406797.1| glycyl-tRNA synthetase subunit beta [Campylobacter hominis ATCC BAA-381] gi|153804501|gb|ABS51508.1| glycyl-tRNA synthetase, beta subunit [Campylobacter hominis ATCC BAA-381] Length = 674 Score = 607 bits (1565), Expect = e-171, Method: Composition-based stats. Identities = 187/722 (25%), Positives = 347/722 (48%), Gaps = 74/722 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI +EE+PA K ++++ +L + + +TP RL L K S Sbjct: 2 ELLIEIGTEELPAIPFLKEFKNIAPKWREILCKNSLE-TEFEFEFTPRRLVLIHKNFSEF 60 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 P+ + G G KA F + G+ ++ + + K +Y L+K Sbjct: 61 QPDSEIIKTGAPKNIALKDGVFTKAALSFAKKCGIS-ENELKFENVDGKEVLYYKKLQKG 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 K ++L +++ + + + +SMRW FS+IRP++S+ C+L ++ + Sbjct: 120 KASA-EILGSMIEEFLLSLNFGRSMRWGNGE-----FSFIRPIRSVACLLDGKN-----V 168 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D + + + HR I+ + D Y + L + ++L + R+ IL++ ++ Sbjct: 169 DFKIFGVQSRAAFFPHRNFGYELIRFRDSDEYFKLLAKNGIILKSDDRKTEILSEFGKIE 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G+++ D +LL E+I + E +G+FD+ +L +P+E+I ++K NQ+ F Sbjct: 229 RENGVKIQIDNELLNEVIAITEHPTALLGNFDESFLAVPKEVIITSMKENQRYFPVF-EN 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+N F++VSN + D G I++GN +V+ ARL DA+ FW+ D + + LK Sbjct: 288 GKLSNHFVVVSNAVSDDNG-LIIKGNEKVLRARLSDAMFFWQNDLKAEFSENKLK----- 341 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV-------- 408 +V + +G+ E+ R K A+ ++ Sbjct: 342 -------------------NVSYMDGLGSVYEKELRELETAKIFAEFYKDELKNEFKKDC 382 Query: 409 --ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 ++RAI+LSKADL + +V EFPELQG +G YA+ +NE+ AI E P G Sbjct: 383 FENEINRAIMLSKADLTSSMVGEFPELQGVMGSYYALYKNEHPLVARAIYEQYLPNGENS 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P S ++++ K +TLI ++I + P+G+KDPYALRRA LGI++I+L ++ ++ Sbjct: 443 ELPNGIFSSIIAISVKFETLIGLFSIGKIPNGNKDPYALRRAALGILKIVLNQNLNFNIA 502 Query: 527 QFIED--QNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 I+ +N F + L +L DR D +I+A + +++ + I L+E Sbjct: 503 SVIKKLAKNYAKFDENSLINFLKDRLYSLYDANVSVIKACINSGENDIKKLNSAIISLDE 562 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 A + + KR+ I+ E+ ++ E E L +V Sbjct: 563 ISKEADFSEKFATFKRLANIIKDEK------IGVVNEALFENETEILLNSVFKSLD---- 612 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++ + + L ++ + I+ FFD+V++N +D++++ NR++L+ I N L V +++ Sbjct: 613 --LNDEDCKNYLNSLFALKDKIDEFFDKVMINAEDKKIKANRIALIGQIYNAFLKVADIK 670 Query: 700 KI 701 +I Sbjct: 671 EI 672 >gi|309388941|gb|ADO76821.1| glycyl-tRNA synthetase, beta subunit [Halanaerobium praevalens DSM 2228] Length = 687 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 209/729 (28%), Positives = 342/729 (46%), Gaps = 71/729 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + + E+ +EE+PA + ED + + + Y+ + Y TP RL L ++ L Sbjct: 1 MAKNLIFEVGTEEMPAASMQRFREDYLQTAATIFENNNLEYEEINVYSTPRRLVLAIEAL 60 Query: 60 SPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + E GP V G +A +GF + GL+ KK A Sbjct: 61 AEKQTDNKEIVRGPAVNIAFDADGNPTRAGEGFAKGQGLEVSDL------TKKDGYLYAE 114 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + ++L I+ I+ VP PK+MRW + +IRP+K +L + +E Sbjct: 115 KITKGQNTANILAGILTQLIKNVPLPKAMRWGSVK-----MEFIRPIKWLLALFGSEK-- 167 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I+L+L I N + GHRF + ++++ D Y LE A V++ + R I Sbjct: 168 ---IELELAGIKSSNYSIGHRFLSEGHLEIKEADAYFSTLENASVIVKQKQREEKIRKQI 224 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 +L + + LL E+I L+E+ F GSFD YL LP E++ ++ +Q+ F Sbjct: 225 EKL--DLSASALIKDSLLTEVIDLIEFPTAFKGSFDSSYLKLPAEVLITAMEKHQRYFPV 282 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +++G L + FI V + + D ++ GN V+ RL+DA F+ DQ + Sbjct: 283 VSQKGELKSEFIGVRDGGS-DFIKEVISGNEMVLKGRLDDAQFFFAEDQKYGFLNRT--- 338 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 ++ D+VF IG+ E+V ++ + +A + Sbjct: 339 -------------------ENIKDIVFQKDIGSVYEKVQKLEKITANLADTLAYTAETKK 379 Query: 413 RAIVLSK---ADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 A +K DL TE+V EF LQG +GKEYA+L E AI EH PR + +P Sbjct: 380 MAKKAAKLAKNDLATEMVNEFSNLQGLMGKEYALLAGEAAETATAIFEHYLPRFAGDKLP 439 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 K +++A+KL L + + +N PSGS+DP+ALRR G++RIILENK++I + Q I Sbjct: 440 ETKSGTILAMAEKLFNLSSHFLLNNIPSGSQDPFALRRQATGLVRIILENKLEINIEQLI 499 Query: 530 EDQNLI----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 I F RL+ L + +IR+D+I A+++ N NL + Sbjct: 500 HSSMKIVAINLEQIDSTAAKLKEFILQRLENLLAEENIRYDIINAVIKVNNHNLFDLYQR 559 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 L EF + + F+ + + ++ I EK E LE L+ EK+LY + Sbjct: 560 AHKLMEFRN-EDSKLFVDLVRGLVRVKNISEKA--ENKLEFDAGLLVENEEKKLYKDLKT 616 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 T I+E +Y + LL + I+ F D V+V VDD+++++NRL+LL I ++ Sbjct: 617 RKTKIKELFSSAKYKKGLYLLVELKPAIDQFLDNVMVMVDDQKIKNNRLALLGSITPLVA 676 Query: 694 IVINVQKIV 702 VI++++I Sbjct: 677 KVIDIEEIA 685 >gi|33240281|ref|NP_875223.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237808|gb|AAP99875.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 721 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 183/753 (24%), Positives = 328/753 (43%), Gaps = 84/753 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI +EE+PA A L ++ LK+ + Y+ +R TP R+F+ + L+ Sbjct: 1 MSNFLLEIGTEELPADFARLAISQLEELVQNDLKQNRIQYELIRCSSTPRRIFVIVNNLA 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 S + +EER GP G A +GF + GL + D +I++ KG + Sbjct: 61 SSSDDFVEERKGPPATKAFKNGCPTPAAEGFAKRYGL-LVEDLEIRET-VKGPFVFGKVV 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +D+L ++P I + + MRW + S + RP++ ++ +L + K K Sbjct: 119 EKGGPSKDLLVDLIPNWINSIQGKRFMRWGSGDS-----RFSRPVRWLVALLDDNEIKVK 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 + EI G ++ GHR + I ++S Y L A V++D E R + I + + Sbjct: 174 -LPDTDPEILSGRLSRGHRLVSNE-ILIESSGEYFEILRGAGVIVDREERLDLIKSLVEK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 + V LL E+ LVE + G F++ +L LP E++ ++ +Q+ Sbjct: 232 SSLEVNATADLTSKLLNELTDLVELPYLIRGEFNESFLELPAEVLSTVMQVHQRYIPLYK 291 Query: 295 RE-----------GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + G+L F+ + N I +GN RV+ AR DA F D+ Sbjct: 292 NDDEVDPLALEAKGILTPFFLCICNGLPQ-SKDLIKEGNERVLKARFADAKFFINADRGL 350 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 + + +V F +G+ +RV RI L + + Sbjct: 351 SSTSRTD----------------------QLKNVTFADGLGSLYDRVKRIEWLAELFIKT 388 Query: 404 ID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + + +A L K DL + +V EFPELQG IG +Y + + E+ A+ E Sbjct: 389 VNFPEGNSNFLRKASSLCKHDLVSHMVGEFPELQGIIGAKYLLAEGESREVALAVLEQYL 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PRG + +P + + ++L ++++ L++ ++ E+PSGS DPYALRRA G+++II + Sbjct: 449 PRGYADKLPESFVGSALALIERIELLLSIYSKGERPSGSSDPYALRRAGNGVLQIIWNKE 508 Query: 521 IDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAIL 560 I L + + +L+ FFH R+ L + I D+I+A+ Sbjct: 509 WKINLLELLTISSSYWLKLFPSFKVDEENLLSDLLDFFHQRIVSLLEESSIDVDIIQAVA 568 Query: 561 RPEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE- 613 + + + + L + +S K R ++ +S Sbjct: 569 GETIPHERLLADPTDVFERVTLLQQMRTSKKLSAVQSVVNRASKLAEKGTLNTDVLSASN 628 Query: 614 -ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 + P ++E + VI+ I S RY ++ + L + + FFD V+ Sbjct: 629 VVDPSLFESQSENSMLEVINSLEP-IAISNSPDRYMKLAEGLAFGSKALAEFFDGEQSVM 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 V ++ +R+NRL+LL ++N ++ + I Sbjct: 688 VMTTNKSIRENRLNLLSVLRNQAQLIADFNLIT 720 >gi|301060996|ref|ZP_07201795.1| glycine--tRNA ligase, beta subunit [delta proteobacterium NaphS2] gi|300444915|gb|EFK08881.1| glycine--tRNA ligase, beta subunit [delta proteobacterium NaphS2] Length = 624 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 190/660 (28%), Positives = 309/660 (46%), Gaps = 66/660 (10%) Query: 67 IEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRL 119 +E GP GA KA GF + G+ I+ KG+ P R Sbjct: 2 TQEVTGPPKKVAYDKNGAPTKAAAGFAKKQGVSVDELQTIET--PKGEYLYVKQEIPGRP 59 Query: 120 IEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLD 179 ++L +P I ++PWPKSMRW +F ++RP+ IL + +++ + Sbjct: 60 TLEILSERLPGIIGEIPWPKSMRWGAV-----SFPFVRPVHWILSLFDG-----RVVPFE 109 Query: 180 LKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + GN T+GHRF AP + V +++ Y + LE A V+LDP R+ +L A A+ V Sbjct: 110 AAGVQSGNSTFGHRFMAPEAVNVSTVEDYRKALENAFVVLDPHERQKVVLKVAQDAAANV 169 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVL 299 G +D +L++ + L E+ GSF+ +L LP+ ++ ++ +QK F G L Sbjct: 170 GGVPADDPELVQTVANLTEYPTAVCGSFENAFLDLPDAVLITAMREHQKYFAVYDDVGSL 229 Query: 300 ANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNL 359 F+ ++N + D + + +G+ RV+ ARL DA F K D+ Sbjct: 230 MPNFVAINNTKTRD-ESVVCRGHERVLRARLSDADFFLKEDRK----------------- 271 Query: 360 DLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI-AQLIDADVALVDRAIVLS 418 +PL +R+ L V++ A++GT +V R+ L I AQ+I V A L+ Sbjct: 272 ---RPLLERLEDLK--QVIYQAQLGTSYAKVMRVEALTAHISAQVIPEQVDGAKLAARLA 326 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 K DL T +V EFP LQG +GK YA L+ + C I +H P +P +I V Sbjct: 327 KCDLVTHMVIEFPSLQGAVGKAYAELEGYDEEICSGIYDHYLPLKAGGALPQTEIGAVVG 386 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLIL-- 536 +AD+LDT+ +A+ +P+G DP+ALRR L +IRII + D+ +E +L Sbjct: 387 MADRLDTIAGCFAVGLEPTGKADPFALRRHALAVIRIIEDRGWDLSFKSLVEKALSLLAE 446 Query: 537 ---------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEF- 580 F +R K + D DL+EA + E D +L++ ++ L EF Sbjct: 447 DITFDFDDTFGRVTAFIRERYKNMMLRSDYASDLVEAAICNEFDRILSLRPKMEQLKEFS 506 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 FSS + L+ KR+ I+ + + + P + +AEK L+ ++E Sbjct: 507 FSSEEFTPLALTFKRVNNIIKKQGRM-----FSVDPAHFKEDAEKDLWEAYQSLKGDVEE 561 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + ++ + P++ FD V + DD R+NR+ LLQ I N +L + + K Sbjct: 562 CIGKSAFLDALGIMTRLRTPVDRLFDHVEILTDDETQRENRVGLLQLISNFVLTIADFSK 621 >gi|308184750|ref|YP_003928883.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori SJM180] gi|308060670|gb|ADO02566.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori SJM180] Length = 700 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 199/733 (27%), Positives = 334/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKCALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLESLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAV 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYASSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L ++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERGIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSISLFKESQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSTFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDVEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|261838340|gb|ACX98106.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori 51] Length = 700 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 198/733 (27%), Positives = 336/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNA----PLESVVFVQGLGTLKDKMEREAIIAQYLTQKYASSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMSLEKALELVSRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L +++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSISLFKELQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T ES+D K + + P+E +F VLV D ++ NR + L + Sbjct: 632 AFNAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIGIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|254779566|ref|YP_003057672.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori B38] gi|254001478|emb|CAX29483.1| Glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain) (GlyRS) [Helicobacter pylori B38] Length = 701 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 198/734 (26%), Positives = 336/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L++K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGTIEVFYTPRRLCLFIKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 G--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETKHDIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYFAT 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FCQKSQEESPTLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEND------- 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 349 -------------LKKPLDNAP----LESVVFVQGLGTLKDKMERESIIAQYLTQKYAPS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 LNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENKLVALSLKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 452 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 ++ L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLEFDLKADLKNLFEKVDVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S S E L+ Sbjct: 572 IIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSGFSTSLFKESQEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 EAFNAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|217033940|ref|ZP_03439363.1| hypothetical protein HP9810_883g10 [Helicobacter pylori 98-10] gi|216943573|gb|EEC23021.1| hypothetical protein HP9810_883g10 [Helicobacter pylori 98-10] Length = 700 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 336/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYAPSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L +++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSTSLFKELQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|188527791|ref|YP_001910478.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Shi470] gi|238691937|sp|B2UUB6|SYGB_HELPS RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|188144031|gb|ACD48448.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Shi470] Length = 700 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 195/733 (26%), Positives = 334/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGKIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNELGLGFYQKLGLKDHQHFQTAFKNNNEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R+ IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKRKAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPNEIIITSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNA----PLESVVFVQGLGTLKDKMEREAIIAQYLTQKYASSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I++ Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVVHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L ++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERGIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFFISLFKESQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSTFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|317182271|dbj|BAJ60055.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F57] Length = 700 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 199/733 (27%), Positives = 337/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFSKHALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW + S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVGSPKAYFEVLEKKHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESLTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYASSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMSLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++II Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L +++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFGAFKRLANINKDRNPNESSEFSISLFKELQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|229824060|ref|ZP_04450129.1| hypothetical protein GCWU000282_01364 [Catonella morbi ATCC 51271] gi|229786414|gb|EEP22528.1| hypothetical protein GCWU000282_01364 [Catonella morbi ATCC 51271] Length = 681 Score = 605 bits (1560), Expect = e-170, Method: Composition-based stats. Identities = 197/729 (27%), Positives = 334/729 (45%), Gaps = 81/729 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +FLLEI EEIPAR ++ L + L EE + Y+++ Y TP RL + + GL+ Sbjct: 1 MAEFLLEIGMEEIPARFLLDLSQQLEKRVADFLAEERLAYESLSAYATPRRLAVLVHGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 S + + GP + G KA GF++ G S + + KG+ Y+ V Sbjct: 61 ERSQDVSTKAKGPSLKIAKDAEGNWTKAALGFIKGQGA---SQEDVIIESIKGEDYIFVN 117 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + D + + ++ + +P +M W +P +IRP+ I+ +L + Sbjct: 118 KHLPGQAADQVLLGLNRVLEAMTFPVTMTWHDYETP-----FIRPIHWIVALL-----DQ 167 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ L+ + I+ GHRF + + Y+ L E VL+D E RR I Sbjct: 168 ALVPLEFVGVKSDRISRGHRFLGHD-VTLAQATDYVEALREQHVLVDFEERRANIRQQLA 226 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 LASA G ++ D+DLLEE+ +VEW VF G F+ KYL +P ++ ++ +Q+ F Sbjct: 227 NLASAQGWQVPVDEDLLEEVTAIVEWPTVFYGDFEDKYLSVPHCVLITAMRDHQRYFYAL 286 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L FI V N A +V+GN +V+ ARLEDAL F++ D + N K Sbjct: 287 DAKGELLPVFISVRNGN-DQHLANVVKGNQKVLRARLEDALFFYQEDLKHDLNFFVDK-- 343 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA---L 410 + +V H K+GT ++ R+ L +++ ++ D A Sbjct: 344 --------------------LANVNEHFKLGTLADKQVRVGALIRQLQSNLNLDQASYEA 383 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 RA + K DL T++V EF ELQG+IG+ YA E AI P +P Sbjct: 384 ALRASQIYKFDLMTQVVGEFDELQGQIGEIYARHYGEEALVAQAIGTQYLPTTSGGALPN 443 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 S ++LADKLDTL ++ + P+GS DPYALRR +GI+ I+L+ ++ L + Sbjct: 444 QDASALLALADKLDTLFQYFKVGLIPTGSNDPYALRRTAMGIVEILLDRGWELDLLPVFK 503 Query: 531 D------------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLN 578 + L F R+ ++L ++ + D I+ I ++ + ++ Sbjct: 504 QLVEAQEGDQELLKQLADFVWARVAVHLRNQSVDMDQIQGIGAAKHLEVG----KANYVA 559 Query: 579 EFFSSAKGEK------FLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVIS 632 F + K + FL + R+ + A +++ +++ ++E +L + Sbjct: 560 HFLKTHKDKNPTAYKRFLEAITRVVNLGAKVQEE-----TQLNLDLAQTDSEAKLLEAAA 614 Query: 633 DFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNII 692 + S+D + L ++ IE +FD VN DD +R NRL+ L+ + + Sbjct: 615 KI-DQYKISVD-----ALYMYLDNLVPVIEAYFDDNKVNADDETIRANRLATLKVLTEAV 668 Query: 693 LIVINVQKI 701 L + + ++ Sbjct: 669 LELFD-SRL 676 >gi|315586911|gb|ADU41292.1| glycyl-tRNA synthetase beta subunit [Helicobacter pylori 35A] Length = 700 Score = 605 bits (1560), Expect = e-170, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 336/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW + S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGSVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIRVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYAPSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALEQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L +++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQKFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSTFKRLANINKDRNPNESSEFFISLFKESQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSTFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|308062285|gb|ADO04173.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Cuz20] Length = 700 Score = 604 bits (1559), Expect = e-170, Method: Composition-based stats. Identities = 196/733 (26%), Positives = 333/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKRALEVGKIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIIITSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN + D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPTLHNGFIVVSNAISKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYASSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L ++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERGIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFFISLFKESQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|109947592|ref|YP_664820.1| glycyl-tRNA synthetase subunit beta [Helicobacter acinonychis str. Sheeba] gi|109714813|emb|CAJ99821.1| glycyl-tRNA synthetase, beta chain [Helicobacter acinonychis str. Sheeba] Length = 705 Score = 604 bits (1559), Expect = e-170, Method: Composition-based stats. Identities = 205/738 (27%), Positives = 341/738 (46%), Gaps = 76/738 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI----YQNMRQYWTPHRLFLYLKG 58 + L+EI +EE+PA+ +++ L L ++ + QN+ ++TP RL +++K Sbjct: 5 ELLVEILTEELPAQALLNEYKEMPKKLHALFQKHAIEMQNEVQNIEIFYTPRRLCVFVKD 64 Query: 59 LSPHSPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDV 108 + E EE GP V GF + GL+ Q K + Sbjct: 65 FPLLTKETKEEFFGPPVEIACNHKDKAQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVL 124 Query: 109 YLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVA 168 Y A + PK+ ++++ IV ++ + + KSMRW + S+IRP+ +I + Sbjct: 125 YHAKIN-PKQPTKNLIMPIVLEFLESLNFGKSMRWGSVEK-----SFIRPIHNICVLFNG 178 Query: 169 EDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAI 228 E+ I + T HR I V S Y LE+ V+LDP+ R I Sbjct: 179 ENFNN--IKIKGYGFKTKQATKTHRQEGFDFIGVDSPKEYFEVLEKNHVILDPKKREAKI 236 Query: 229 LNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 L + L + + D+DLL+EI+ + E+ V +G FDK +L LP E+I ++K NQ+ Sbjct: 237 LQEIKELEKKHQIIVEVDRDLLDEIVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQR 296 Query: 289 CFVTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 F T +E L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 YFATFNQESQEESQKLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYEND--- 352 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 L KPLD + VVF +GT +++ R V+ + + Q Sbjct: 353 -----------------LKKPLDNTP----LESVVFVQGLGTLKDKMERELVIAQYLTQK 391 Query: 404 --------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 ++ + L+ RAI ++KADL +E+V EF ELQG +G YA+ QNEN ++ Sbjct: 392 YAPSLNMPLEKALELIGRAIKIAKADLLSEVVYEFTELQGIMGYYYALKQNENELVALSL 451 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 +E P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I Sbjct: 452 KEQYLPTSENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKI 511 Query: 516 ILENKIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPEND 565 I+ + L F + F + L+ +L +R D +I ++L Sbjct: 512 IVHYGLKFDLKMDLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNER 571 Query: 566 NLLTIVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAE 624 +++ I+ +K L F K + ++ I + +N + E S E Sbjct: 572 DIVAIIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDQNPNQTSEFSTNLFKEPQE 631 Query: 625 KRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSL 684 L+ + T ES+D K + S+ P+E +F VLV D E++ NR + Sbjct: 632 HALFKAFNAITTSAFESLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDLEIQKNRKNF 686 Query: 685 LQYIKNIILIVINVQKIV 702 L + L + +V++I Sbjct: 687 LWNVYQSFLEIGDVKEIA 704 >gi|118594506|ref|ZP_01551853.1| glycyl-tRNA synthetase, beta subunit [Methylophilales bacterium HTCC2181] gi|118440284|gb|EAV46911.1| glycyl-tRNA synthetase, beta subunit [Methylophilales bacterium HTCC2181] Length = 697 Score = 604 bits (1559), Expect = e-170, Method: Composition-based stats. Identities = 199/724 (27%), Positives = 349/724 (48%), Gaps = 58/724 (8%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQ-NMRQYWTPHRLFLYLKGLSP 61 + L+EI +EE+P Q E + + + E +I + +P R+ + +K + Sbjct: 5 NLLIEIVTEELPPLSQKDLGEAFAKNIAQSILELKLIESLEYETFSSPRRIGVLVKQVLL 64 Query: 62 HSP-EKIEERLGPRV------GAGKKAIDGFLRSTG--LQTISDCQIKKDPKKGDVYLAV 112 EK + +L P A+ L S G L I + ++ ++ + ++YL Sbjct: 65 SGDNEKRKIKLMPAKVGFREENKPSDALIKKLDSMGEGLSAIKNLELVEEKGQFNIYLEK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 K L E+ L I+ ++ +P K M + + +++RP+K+IL + Sbjct: 125 SFDGKSLYEE-LPQIINNSLAHLPIKKLMSYQLNDG-WTTVNFVRPIKNILAVY-----G 177 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPI-KVQSLDHYIRDLE-EAMVLLDPECRRNAILN 230 +K++DL+ + TYGHRF + H + + Y + L E V+ R+ I Sbjct: 178 DKLVDLECMGLKSVMHTYGHRFESKHDVLAIHDASLYEKVLLTEGRVIASFSKRKEKIKT 237 Query: 231 DAHRLASAVG--LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQK 288 D + + + D LLEE+ LVE + +G F+ +YL +P+E + LT+++NQK Sbjct: 238 DLNEAVKKINNKFRAITDDKLLEEVTSLVEMPNILIGEFENQYLEVPQECLILTMQSNQK 297 Query: 289 CFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F + L N F++VSNI + I++GN +V+ RL DA F+K+D Sbjct: 298 YFPILNDQDELTNYFVIVSNINPKNS-TNIIEGNEKVIRPRLADAEFFYKKD-------- 348 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-AD 407 ++ L + L + +H K+GTQ +R R+ + K I++ ++ + Sbjct: 349 ------------MAYTLKKYSENL--RSITYHNKLGTQHDRALRVASIMKFISKKLNVKN 394 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 V + + +KADL +V EFPELQG IG+ YA+ + DAIE+H P+ Sbjct: 395 VTNFENLALHAKADLLCLMVGEFPELQGVIGRYYALNEGHANDFADAIEDHYNPKFSGGK 454 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P ++ +++ADK++TL++ ++I EKP+G KDP+ALRR +G+IRI+ E I + L + Sbjct: 455 LPREQMGDMLAIADKIETLMSLFSIGEKPTGVKDPFALRRNAIGLIRILAEKNIPLELDE 514 Query: 528 FIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 ++ L F DRL YL D+ +EA+ L I++ + Sbjct: 515 LLKTFYPNSDLKSLNELTAFIQDRLINYLKDKGFTPQQVEAVAGEMPKTLDNILERANAV 574 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTH 637 F + E + KR+ IL N E I P L+ EK L+ +++ Sbjct: 575 KLFSQLNQSEDLASANKRVVNILKKYNSNNMET---IDPSLLIENEEKFLFKSLNETSKK 631 Query: 638 IQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVIN 697 I+E + K Y + +L ++ EPI++FF++++VN DD ++ NR +LL + + V N Sbjct: 632 IREFVKAKDYDRALSILINLKEPIDLFFEKIMVNADDDAIKKNRHNLLIQLYKEMNCVAN 691 Query: 698 VQKI 701 + K+ Sbjct: 692 ISKL 695 >gi|332283303|ref|YP_004415214.1| glycyl-tRNA synthetase beta chain [Pusillimonas sp. T7-7] gi|330427256|gb|AEC18590.1| glycyl-tRNA synthetase beta chain [Pusillimonas sp. T7-7] Length = 717 Score = 604 bits (1559), Expect = e-170, Method: Composition-based stats. Identities = 194/729 (26%), Positives = 315/729 (43%), Gaps = 75/729 (10%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQ--YWTPHRLFLYLKGLSPHSPE-KIEER 70 P + K + + +L ++ ++ + TP RL + L + +PE + E+ Sbjct: 23 PPKALQKLGLAFAEGIRKVLDQQRLLADGCTVADFSTPRRLAVRLSAVLGQAPEQRYTEK 82 Query: 71 LGPR------VGAGKKAIDGFLRSTGLQ-TISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 L P A+ L S L+ + I + K D A L++ Sbjct: 83 LMPAKIGLTETNEITPALAKKLASKHLEHLTAADLIHESDGKQDYLYAQGVSSGALLDPA 142 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 L+ + AI +P PK MR+ +S+ ++RP ++ + E++ID+ + Sbjct: 143 LQEALDYAITHLPIPKVMRYQLADG-VSSVKFVRPAHQLVALW-----GEQVIDIQALGL 196 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAHRLASAVGLE 242 G T GHRF + I++ + Y + L +E V+ RR I A A+G Sbjct: 197 KSGRKTLGHRFMSTQVIELTDPNTYEQQLLDEGKVIASFTDRRTLISEQLLEQAQALGAT 256 Query: 243 L---VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE-GV 298 + E LL+E+ LVE V++G F++++L +P E + LT++ NQK F + G Sbjct: 257 IGTGSEVDALLDEVTALVEHPTVYVGEFEQQFLGVPPECLILTMRLNQKYFPLFEPDTGK 316 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L + F++VSN+Q +D + I+QGN RVV RL DA F FN Sbjct: 317 LTHRFLIVSNMQIADP-SHIIQGNQRVVRPRLADAQFF--------------------FN 355 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 DL PL R+ L V+H K+GTQ RV R+R L + IA+ + AD+ RA +L+ Sbjct: 356 TDLKTPLADRVVSL--ASSVYHNKLGTQLNRVERVRKLARHIAEQLGADITHAGRASLLA 413 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA E AI + R P + V Sbjct: 414 KADLNSSMVGEFPELQGIMGAYYAAADGEADDVVLAIRNQYRIRLDTPIEPATLTAAIVF 473 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII---------------------- 516 +A++++TL+ W I P+G +DPY LRRA LG+I Sbjct: 474 MAERIETLLGIWGIGLAPTGERDPYGLRRAALGLISAFEQLQAGGYLNISDTTTLNLHDL 533 Query: 517 ---LENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 N ++ + + F ++R + L D +I+A+L + L + Sbjct: 534 LHHAANTFELGVIAADTVAEVEAFIYERYRNLLS-HDFNRHVIDAVLALKPA-LHQVHAR 591 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 F + E + KRI +L KK + L AEK L +I+ Sbjct: 592 SAACAAFAQRPEAESLSAANKRIANLL----KKADAAPSSLDHSQLSDPAEKALADIIAK 647 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 QE + + + ++ FF+ V+V DD +R NRL+LL + + Sbjct: 648 LEPQAQEQFAQGNFSGSMATMAQAKDAVDAFFNDVMVMADDPAIRANRLALLNDLHRNMN 707 Query: 694 IVINVQKIV 702 V ++ ++ Sbjct: 708 QVADISRLA 716 >gi|332673814|gb|AEE70631.1| glycyl-tRNA synthetase beta subunit [Helicobacter pylori 83] Length = 700 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 198/733 (27%), Positives = 336/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + + ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGTIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQEIKEEFFGPPVKIACNHQDKMQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVEIDRDLLDEVVAITEYPSVLLGEFDKAFLKLPSEIITTSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FNQKSQESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYASSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + LV RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELVGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L +++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSISLFKELQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSAFESLDSK-----IEAYFGLHVPLEEYFKSVLVMDKDVEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|33598170|ref|NP_885813.1| glycyl-tRNA synthetase beta chain [Bordetella parapertussis 12822] gi|33566728|emb|CAE38939.1| glycyl-tRNA synthetase beta chain [Bordetella parapertussis] Length = 712 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 187/739 (25%), Positives = 324/739 (43%), Gaps = 75/739 (10%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQN--MRQYWTPHRLFLYLKGLSP 61 L+E+++EE+P + K + + + L ++ + + TP RL + L + Sbjct: 8 LLVELFTEELPPKALQKLGQAFAEGVRATLARHHLLADGCAVEPFATPRRLAVRLSAVLA 67 Query: 62 HSPEK-IEERLGP------RVGAGKKAIDGFLRSTGLQTISDCQIKKD-PKKGDVYLAVL 113 +PE+ E+L P G A+ L + GL+ + ++++ K + +A Sbjct: 68 QAPEQAYAEKLMPVKVGLDANGQPTAALAKKLAAKGLEGLDPATLERESDGKQEYLVARG 127 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + L+ + AI +P PK MR+ ++RP ++ + A+ Sbjct: 128 TAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQT-TVKFVRPAHGLVALFGAD---- 182 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDA 232 I+ + + G T GHRF + I++ + Y DL E V+ E RR I Sbjct: 183 -IVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAERGRVIASFEARRAEISRLL 241 Query: 233 HRLASAVGLELVEDKD---LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 A +G L +D + LL+E+ LVE V++G F++++L +P+E + LT++ NQK Sbjct: 242 DEHAQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEEQFLQVPQECLILTMRLNQKY 301 Query: 290 FVTRT-REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 F G L + F++VSN+Q +D A IV+GN RVV RL DA F++ D+ Sbjct: 302 FPLFDPASGKLTHRFLIVSNMQVADP-ANIVEGNQRVVRPRLADAQFFFETDRK------ 354 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV 408 PL R+ +L +V+H K+ TQ ERV R+R + + IA + D Sbjct: 355 --------------TPLAARVEQLG--SIVYHNKLSTQLERVERVRAIARGIATALGGDA 398 Query: 409 ALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 A DRA +L+KADL + +V EFPELQG +G YA E A+ + R Sbjct: 399 AHCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNRYDAPVD 458 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI---ILENKI---- 521 + T+ +A++++TL+ W+I P+G +DP+ LRRA LG+I + Sbjct: 459 AATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKVS 518 Query: 522 ---DIPLSQFIEDQNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + L + F ++R + L R + +EA++ Sbjct: 519 EDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYERYRNQLIGEHDR-NAVEAVIALA 577 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 L + ++ + F + KRI +L E + + + A Sbjct: 578 P-PLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLLKKAEGEIG----AVDAALVQDPA 632 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 EK L ++ + + + L EP++ FF V+V DD +R NRL+ Sbjct: 633 EKALAEAVAQLRPQARAQLQAGDFAASLATLAQAREPVDAFFADVMVMADDAALRANRLA 692 Query: 684 LLQYIKNIILIVINVQKIV 702 LL + ++ V ++ ++ Sbjct: 693 LLGQLHGLMNQVADISRLA 711 >gi|148261175|ref|YP_001235302.1| glycine--tRNA ligase [Acidiphilium cryptum JF-5] gi|146402856|gb|ABQ31383.1| glycyl-tRNA synthetase beta chain [Acidiphilium cryptum JF-5] Length = 723 Score = 604 bits (1558), Expect = e-170, Method: Composition-based stats. Identities = 240/761 (31%), Positives = 361/761 (47%), Gaps = 100/761 (13%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F LE++SEEIPARMQ AAE L+ ++ L + ++++ + R+ + + + Sbjct: 1 MAEFFLELFSEEIPARMQEAAAEQLAKLVGAQL--APLSPRDIKAFGAARRIAV-VATID 57 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 PE E GP++ A +A++GFLR G + +++D +L P R Sbjct: 58 AEVPESASELRGPKLAAPPQALEGFLRKNGAA--REELVEEDG----YFLLRRNLPSRPA 111 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +++ A+ WPKSMRW AF+W+RPL+ ++C+L E ++ L Sbjct: 112 GELIAGEFAQALAGFGWPKSMRWG----QSGAFTWVRPLRRVVCLLDGE-----VVPFTL 162 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + G+ + GHRF AP +V S + +L V++D + RR I A G Sbjct: 163 GPVASGDESEGHRFLAPGAFRVSSAAQWREELRARFVIVDADERRERIRAGLRAAAGDKG 222 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 L + D LL+E+ GLVEW +G+ D + LP E+ L++K NQ+ F TR G A Sbjct: 223 LGVAGDAGLLDEVAGLVEWPVCLIGAIDPGQMALPPEVRELSMKVNQRYFATRDAAGTPA 282 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 F V+NI A+DGGAAI+ GN RV+ ARL DA HFW +D+ Sbjct: 283 PYFAFVANIAANDGGAAIIAGNERVLRARLADAEHFWAQDRK------------------ 324 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI---AQLIDADVALVDRAIVL 417 + L+ + +LD V FHAK+GTQ R RI L ++I A RA L Sbjct: 325 --QTLESWLPKLDA--VTFHAKLGTQHARAGRIEALAREIALALGADAAAADAAARAGRL 380 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 KADL + +V EFPELQG +G YA E + AI H +P+GP + VP+ +S V Sbjct: 381 CKADLVSGMVGEFPELQGIMGGYYAEASGEGDAIAGAIRTHYQPKGPSDEVPSGVVSAAV 440 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ----- 532 +LADK+DTL F+ I EKP+GS DPYALRRA LG+IRI+L N+ +PL Q ++ Sbjct: 441 ALADKIDTLAGFFVIGEKPTGSGDPYALRRAALGVIRIVLVNRFALPLRQILDVAVERIS 500 Query: 533 --------------------------NLILFFH-------------------------DR 541 FF DR Sbjct: 501 ESIFAAAEETTDKAIAYAQSQNVPVGARARFFARVTVLDPASGKQINSRVPEIFDFIIDR 560 Query: 542 LKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQIL 600 L++ L R D++ A+L +D+L ++ + L F ++ G L + +R IL Sbjct: 561 LRVLLRSEGKRFDVLNAVLDTARDDDLTRLIARTEALGAFLATEDGANLLAAYRRSTNIL 620 Query: 601 AIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEP 660 IE+ K+ I P L AE L + + + + ++ P Sbjct: 621 RIEDAKDGPHEGTIDPGLLAEAAEIALADALEAVDREAVRRLADEDFAGAMRGFAALRAP 680 Query: 661 IEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 ++ FFD V VN E+R NRL LL +++++ V + K+ Sbjct: 681 VDAFFDHVTVNATGAELRRNRLRLLARLRDVMHRVADFSKL 721 >gi|261839755|gb|ACX99520.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori 52] Length = 701 Score = 603 bits (1556), Expect = e-170, Method: Composition-based stats. Identities = 198/734 (26%), Positives = 336/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKRALEVGNIEIFYTPRRLCLLVKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNHQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+EI+ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHHIIVETDRDLLDEIVAITEYPSALLGEFDKAFLKLPNEIITTSMKENQRYFAA 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FSQKSQEESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYEND------- 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 349 -------------LKKPLDNAP----LESVVFVQGLGTLKDKMERESIIAQYLTQKYAPS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 LNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + +++ + PSGSKDP+ALRR + G+++I+ Sbjct: 452 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIVAHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 + L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLGFDLKADLKNLFEKVGVYQSFDLEVLEKFLLERFNNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSTSLFKELQEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 632 EAFNAIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|224418133|ref|ZP_03656139.1| glycyl-tRNA synthetase subunit beta [Helicobacter canadensis MIT 98-5491] gi|253827460|ref|ZP_04870345.1| Glycine--tRNA ligase [Helicobacter canadensis MIT 98-5491] gi|313141668|ref|ZP_07803861.1| glycyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253510866|gb|EES89525.1| Glycine--tRNA ligase [Helicobacter canadensis MIT 98-5491] gi|313130699|gb|EFR48316.1| glycyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 680 Score = 603 bits (1556), Expect = e-170, Method: Composition-based stats. Identities = 200/721 (27%), Positives = 331/721 (45%), Gaps = 68/721 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FLLEI ++E+PA ++ +L++ ++ + ++TP RL L K Sbjct: 4 TFLLEIGTQELPAIPLLTELPNIKPKFAKILEKYRLLC-DFDFFYTPRRLVLIAKQFPIT 62 Query: 63 SPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + E GP + +A GF + G+ + KD K ++ P Sbjct: 63 QKSQTLEFFGPPLNIAYKDNEPTQAALGFFKKCGITQQEVTTLIKDDK--EILYFKKESP 120 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + +D+L+ I ++ + + KSMRW S+IRP+ ILC+L + +I Sbjct: 121 QTPAQDLLQIITQEFLESLNFGKSMRWGNHKE-----SFIRPISWILCLL-----NDTLI 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 L L I + T+ HR + +V SLD+Y + L+ ++L + RR IL + + Sbjct: 171 PLHLYGINSKSQTFVHRNISFDAKEVTSLDNYFQVLQGGKIILKQDQRREKILQEIQAIQ 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G+++ D++LLEEI+ + E+ G F + +L LP I ++K NQ+ F T + Sbjct: 231 TQKGIKVEIDEELLEEIVSITEYPTALFGEFSEHFLELPPPCIITSMKINQRYFATY-KN 289 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L N F++VSN S+ I++GN +V+ ARLEDAL F+ D N N LKE Sbjct: 290 EKLHNGFVMVSN-SLSEKNQIIIEGNVKVLKARLEDALFFYHNDLKNGLNPEKLKE---- 344 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---------IDAD 407 V F +GT ++ R R + K +A L Sbjct: 345 --------------------VTFVEGLGTMWDKTQRERQIIKILAPLYQKYFNSQDFGLT 384 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 + ++D+A LSKADL +E+V EF +LQG +G YA + AI+E P Sbjct: 385 LEILDQASNLSKADLMSEMVYEFTDLQGIMGYYYANALGYESNVALAIKEQYLPNSEESP 444 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ 527 +P+N IS V+LA KLD L +++ + PSGS+DP+ALRRA +G+I+IIL + L + Sbjct: 445 LPSNLISAFVALAYKLDNLFGLFSVKKIPSGSRDPFALRRAAIGMIKIILHFDLPFDLKK 504 Query: 528 FIEDQNLIL--FFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 + F +L+ ++ +R L+ A+L +LL I + L+ Sbjct: 505 IFSLIAPLYRPFDLQQLENFILERLDSMLSFNASLLRAVLATGERDLLQIYQKLSVLDSI 564 Query: 581 FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 + + KR+ I ++ N L I LL E LY + Sbjct: 565 LKNQDKALLTQTFKRVANIT---KEINLNSDLPIKADKLLASEEIELYKAFCAYEEKSLT 621 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 Y + + L ++ + FFD+VLVN D + ++NR +L+ I L + ++++ Sbjct: 622 L----NYQEQLENLLALNPLLSRFFDKVLVNAPDEDFKNNRKNLIARIYKAFLKIADIKE 677 Query: 701 I 701 I Sbjct: 678 I 678 >gi|108563378|ref|YP_627694.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori HPAG1] gi|122386356|sp|Q1CSQ2|SYGB_HELPH RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|107837151|gb|ABF85020.1| glycyl-tRNA synthetase, beta subunit [Helicobacter pylori HPAG1] Length = 701 Score = 603 bits (1556), Expect = e-170, Method: Composition-based stats. Identities = 196/734 (26%), Positives = 334/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L LL + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALLNKRALEAGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP + GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPIKIAFNNEDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHE-KEPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 G--IEVKEYGFKTKQATKVHRQEGFDFIEVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHDIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPNEIITTSMKENQRYFAV 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 ++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FDQKSQEESPTLHNGFIVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYEND------- 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 349 -------------LKKPLDNTP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYAPS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 LNMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ Sbjct: 452 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSAGKIPSGSKDPFALRRLSFGLLKIVAHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 ++ L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSISLFKELQEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 + T E +D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 EAFNAIQTSAFEGLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|189485253|ref|YP_001956194.1| glysiyl-tRNA synthetase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287212|dbj|BAG13733.1| glysiyl-tRNA synthetase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 704 Score = 603 bits (1556), Expect = e-170, Method: Composition-based stats. Identities = 198/730 (27%), Positives = 338/730 (46%), Gaps = 68/730 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + LLEI +EEIP+ A + + + G+ + ++ Y TP RL L ++ L Sbjct: 7 KNALLEIGAEEIPSSYIEPALKQIEDYALKAFNTSGLKHGVLKTYATPRRLVLIVENLEE 66 Query: 62 HSPEKIEERLGPRVGAGKKA-------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 S +K EE LGP + A K A GF G+ I + K +KGD V + Sbjct: 67 KSDDKTEEVLGPSLNAAKDAHGKYTRAAVGFALKNGV--IPEKLAVKTTEKGDYLFFVKK 124 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 E +L I P I+ + +PK M W S F + RP+++I+ + +K Sbjct: 125 IKGEKTEKLLVAIFPEIIKNISFPKIMIW-----EESGFKFARPVRNIVALY-----GKK 174 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I + ++ N T G + IK+ + Y+ ++ V++D RR I Sbjct: 175 VIKFKIADVNSSNWTVGLHTYDNSRIKIDLPEKYLLAMKNKSVIVDQNERREEIKRSIKY 234 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 A +G ++ D++L++++ LVE+ + +F++KYL LP+E++ + ++ +QK F Sbjct: 235 AAENIG-SVIPDEELVDKVNYLVEYPSAVLCAFNRKYLDLPQEILTVCMRKSQKSFAIND 293 Query: 295 REGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 G +N FI V N + +G +VVAARL DA F+ D Sbjct: 294 ENGKFSNYFISVKNGVSK-YQETAKEGYEKVVAARLADAEFFYSND-------------- 338 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVD 412 L K L + +L +VFH +IGT E++ RI+ + + D D + ++ Sbjct: 339 ------LKKGLGINIEKLK--GIVFHKEIGTVYEKIERIKQIATLFNEEFDMRIDGSALE 390 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA++LSK DL +E+V E+PELQG +G+ YA+ EN ++E+H P +P + Sbjct: 391 RAVMLSKVDLTSEMVFEYPELQGVMGRIYALKSGENADVASSVEQHYWPLVTSGKLPLHP 450 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI----------------- 515 ++ +SLADK+DTL F++I +PSGS DPY ++RA G +++ Sbjct: 451 MASLLSLADKIDTLTAFFSIGLEPSGSADPYGVKRAGTGFVKVAMNELPKCDLTGVVGRV 510 Query: 516 --ILENKIDIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDN----LLT 569 L + + LI FF R++ D ++A++ N + + Sbjct: 511 FEFLPENVKNNPKSKDACERLIKFFWQRIENIFESEGYNSDEVKAVINAVGINKLKYIGS 570 Query: 570 IVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + ++ L + KRI I++ +K+N IS ++ L AEK LY Sbjct: 571 LRTKLEALRNADREGDFSFVVAIFKRINNIISQAKKQNIGISGVVNEDLLAENAEKALYT 630 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 I+ + Y ++ + I I+ FF++V+V +D ++ NR+SLL YIK Sbjct: 631 AAKKAKAEIENCVSANEYGRVFGKVSEIKPAIDSFFEKVMVMAEDETIKLNRVSLLSYIK 690 Query: 690 NIILIVINVQ 699 N+ ++ Sbjct: 691 NMFAGFVDFS 700 >gi|269215556|ref|ZP_06159410.1| glycyl-tRNA synthetase, beta subunit [Slackia exigua ATCC 700122] gi|269131043|gb|EEZ62118.1| glycyl-tRNA synthetase, beta subunit [Slackia exigua ATCC 700122] Length = 695 Score = 603 bits (1556), Expect = e-170, Method: Composition-based stats. Identities = 188/710 (26%), Positives = 300/710 (42%), Gaps = 76/710 (10%) Query: 1 MPD--FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKG 58 M + EI +EE+PA H A E L ++ L+ + + + Y TP RL + Sbjct: 1 MANKTLAFEIGTEELPAFALHAATEKLPELVASLMDAAKIPHAGIEAYSTPRRLIAIVHD 60 Query: 59 LSPHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + + E GP G KA GF R G+ + ++D + A Sbjct: 61 VPEKTEASEETFRGPAAEIAFDAEGKPTKAALGFARGKGVDASALE--RRDENGVEYVYA 118 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 V P + +L ++ I + WPKS RW+ + RP++ I+ +L Sbjct: 119 VKTTPSLDVAGLLSDVLHEVITGIAWPKSQRWAAYRE-----QFSRPVRWIVALL----- 168 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 + ++ L G TYGHRF AP I+ D + L A V+ R +I + Sbjct: 169 GDAVVPLSFAGAESGRTTYGHRFLAPAGIEFACADDLVETLCGAFVVPSEAEREASIRSQ 228 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 + A GL + E++ L E+ V +G FD+ +L +P+E+I + +Q+ F Sbjct: 229 VQAVEEATGLTADLPARTMAEVVNLTEYPTVMVGGFDELFLKVPKEIIVDAMLVHQRYFP 288 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 +G LAN F++ SN A IV GN RVVAARL DA F+ D Sbjct: 289 LFNADGTLANKFLITSNGNPK-FEANIVDGNERVVAARLYDAKFFYDED----------- 336 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ----LIDAD 407 L +PL+ + L VVF K+G+ + RI L + D + Sbjct: 337 ---------LKRPLEAYVPDLK--HVVFQEKLGSTFAKTVRIERLASFVCDSSSTATDQE 385 Query: 408 VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLEN 467 A RA L KADL T V EF +QG +G YA E AI +H +PR + Sbjct: 386 KADARRAAFLCKADLVTGAVVEFTSVQGIMGSYYAKAAGETDEVARAIADHYRPRFSGDG 445 Query: 468 VPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL-- 525 +P V+ ADKLDT+ +AI++ P+GS DP+ALRR+ +GI+ +L + +++ L Sbjct: 446 LPQGFAGRAVAFADKLDTICGLFAIDQAPTGSSDPFALRRSAIGIVG-LLNDGLEVSLGA 504 Query: 526 ----------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLT 569 + + ++ FF R K+ L D + D I+A+L T Sbjct: 505 AVDAALASYETDGLVFDRIEVAEAVVDFFVTRTKVILRDEGVSADAIDAVLAARVVEPAT 564 Query: 570 IVDLIKHL--NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I + L E ++ R + ++ + +AE+ L Sbjct: 565 IAKRARALDMQRAAEPEAFEDLAIAFARANNL------RDAAAGDVCDEEAF-NDAERTL 617 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 +A + + ++D + Q L ++ PI+ FF V+V +D +V Sbjct: 618 FAATARARADVAAALDDDDFAQALTSLAALRRPIDAFFTDVMVMDEDPDV 667 >gi|15642990|ref|NP_228032.1| glycyl-tRNA synthetase, beta subunit [Thermotoga maritima MSB8] gi|11387212|sp|Q9WY60|SYGB_THEMA RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|4980715|gb|AAD35309.1|AE001706_8 glycyl-tRNA synthetase, beta subunit [Thermotoga maritima MSB8] Length = 672 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 184/723 (25%), Positives = 333/723 (46%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H + L LLK V ++ + R + LK L Sbjct: 1 MRTALLEVGLEELPASEFHSILKQLEEKSAELLKAYRVSSGSVEVFVGSRRFGVILKNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE+ GP + G +A++GFLR+ + + G VYL+ + Sbjct: 61 ERQEDFTEEKKGPPLNVAYDENGKPTRALEGFLRNNNASLENVVHRE-----GYVYLSRV 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +E+VL + + + + K MRW + +IRP+ I+ + Sbjct: 116 VE-GKPVEEVLPDLFRDLVLGLNFRKPMRWGSGE-----HEYIRPVHWIVAM-----VDG 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL++ + I+YG R+HA I++ + Y L++ V+ R+ +L Sbjct: 165 RVLDLEIFGLRSSRISYGKRYHA-GSIEIPDSERYYESLKKGFVISSHLERKKFVLEQID 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 +++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 224 EFEKRSSMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFIA- 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 +G L N F+ + +V+G RV+ ARLEDA +++++D Sbjct: 283 -HKGTLTNTFVAFQDG--PQPPENVVKGYERVINARLEDARYYFQKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 L PL++ +L ++VF K+GT ++V RI+ + +++ + L + Sbjct: 327 -------LETPLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISQRLCEDLKLPGSFTQK 377 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H P Sbjct: 378 VLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHYS------EEPQ 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + + Sbjct: 432 TVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKSKADTIFRIIRKNEWDISLEELLT 491 Query: 531 DQNLIL----------FFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R +L + I D+ A+ L I+ + L E Sbjct: 492 FASSLVGYRLSEELETFFAGRFYQFLINELGISFDVARAVNHLWKKPLRGILS-AEALQE 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I S + E EK+L + + Sbjct: 551 ISEKPEFQDLFVGFERVHNITK------NHDSTKFDGALFEKEEEKKLMNKFYEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V ++R NRLS L+ I + ++V ++ Sbjct: 605 KALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLSFLKNIDELFMMVGDMT 664 Query: 700 KIV 702 +V Sbjct: 665 YLV 667 >gi|281412274|ref|YP_003346353.1| glycyl-tRNA synthetase, beta subunit [Thermotoga naphthophila RKU-10] gi|281373377|gb|ADA66939.1| glycyl-tRNA synthetase, beta subunit [Thermotoga naphthophila RKU-10] Length = 672 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 181/723 (25%), Positives = 332/723 (45%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H + L LLK + + + R + LK L Sbjct: 1 MRTALLEVGLEELPASEFHSILKQLEERSTELLKAYRISSGSAEVFVGSRRFGVILKNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE+ GP + G KA++GFLR+ + + G +YL+ + Sbjct: 61 ERQEDFTEEKKGPPLNVAYDENGKPTKALEGFLRNNNASLENVVHRE-----GYIYLSRV 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +E+VL + + + + K MRW + +IRP+ I+ + Sbjct: 116 VE-GKPVEEVLPDLFRDLVLGLNFRKPMRWGSGE-----HEYIRPVHWIVAM-----VDG 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL++ + I+YG R+HA I++ + Y L++ V+ R+ +L Sbjct: 165 RVLDLEIFGLRSSRISYGKRYHA-GSIEIPDPERYYESLKKGFVISSHLERKKFVLEQID 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 G+++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 224 EFEKRSGMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFIA- 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + L N F+ + +V+G RV+ ARLEDA +++++D Sbjct: 283 -HKETLTNTFVAFQDG--PQPPENVVKGYERVINARLEDARYYFQKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 L PL++ +L ++VF K+GT ++V RI+ + +++ + L ++ Sbjct: 327 -------LETPLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISERLCEDLKLPESFTQK 377 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H P Sbjct: 378 VLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHYS------EEPQ 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + + Sbjct: 432 TVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKNKADAIFRIIRKNEWDISLEELLT 491 Query: 531 DQNLIL----------FFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R +L ++ I D+ A+ L + + L E Sbjct: 492 FASSLVGYRLSEELETFFAGRFYQFLVNELGISFDVARAV-NHLWKRPLRGILSAEALQE 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I S+ E EK+L + + Sbjct: 551 ISEKPEFQDLFVGFERVHNITK------NHDSVRFDGALFEKEEEKKLMNKFYEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V ++R NRL L+ I + ++V ++ Sbjct: 605 KALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLGFLKNIDELFMMVGDMT 664 Query: 700 KIV 702 +V Sbjct: 665 YLV 667 >gi|71891813|ref|YP_277542.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71795919|gb|AAZ40670.1| glycine-tRNA synthetase, beta subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 695 Score = 602 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 192/737 (26%), Positives = 332/737 (45%), Gaps = 90/737 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 FL+EI +E +P+++ K +D +I K+ +Y + + + RL + Sbjct: 5 TFLVEIGTESLPSKILKKLGKDFFYQIISGFKKNNFVYDKVNWFASSCRLAV-------K 57 Query: 63 SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPK----- 117 + I+ + ++ G T D + + + + Sbjct: 58 ANLIIKSDFNTNIACVDQSDTG-------DTYDKYINNTDTQINHIVNNINIRSGVCVNN 110 Query: 118 --------------RLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSIL 163 + ++ +L I+ A++K+ + MRWS P +IRP++++ Sbjct: 111 VQRTLECDTNIVIHKNLKYLLCKIISSALEKLNNYEMMRWSDIDIP-----FIRPVRTVT 165 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPE 222 +L +I + + YG+R I ++ DHY L + V+ D + Sbjct: 166 ILL-----DTYLIPGYFFGMKTDRVLYGNRCMEDDKITLEHADHYPDVLIKNGWVIADYD 220 Query: 223 CRRNAILNDAHRLASAVGLELVEDKD--LLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 R+N I ++ + A +G + + LLEE+ LVEW + G F+ K+L LP E+I Sbjct: 221 IRKNIICSEIEKEARKLGGVVDVQDEKILLEEVTSLVEWPVILSGQFNNKFLVLPREVIL 280 Query: 281 LTIKTNQKCFVTRTR-EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 +K +QK F +GVL FI VSN SD I+ G+ V+ RL DA F + Sbjct: 281 HIMKYDQKYFPVYNVIDGVLLPYFIFVSNT-ISDNYKKIIAGHENVIIPRLMDAEFFLMQ 339 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D L+ + +L+ V+FH+++GT ++ RI L Sbjct: 340 DNKC--------------------RLEDYIPKLN--SVLFHSRLGTLRDKSWRIAELSGW 377 Query: 400 IAQLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 IA+ I D+ RA L K DL + +V EFP QG IG YA+ E+ A +EH Sbjct: 378 IAEKIGIDIEQTKRAGYLCKCDLMSNMVFEFPSAQGTIGMHYALRDGESEEIALAQKEHY 437 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 +PR + +PT IS VS+ADK+DT+ + + E P G++DP+AL+R+ +GI+RI++ Sbjct: 438 QPRFSKDTLPTTHISCAVSIADKMDTISGIFGVKELPKGNRDPFALKRSAIGILRILMYK 497 Query: 520 KIDIPLSQFIEDQNLI---------------LFFHDRLKLYLHDRDIRHDLIEAILRPEN 564 K+ I L I+ + F ++RL + R + D+I+A+L ++ Sbjct: 498 KLPINLFDLIQKSVKLYGSQLINTTVINDIHHFMYNRLLSWYSSRGYKLDVIKAVLSVKS 557 Query: 565 DNLLTIVDLIKHLNEFFSSAKGEKFLLS--AKRIFQILAIEEKKNREISLEISPQYLLLE 622 D+++ I I+ + +FF K E ++ KRI IL K + ++ L + Sbjct: 558 DSVVDIDARIRAVTDFFGLQKEENVKVNLIYKRISNILL---KNKISCNEDVQHFLLKIP 614 Query: 623 AEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 E L + +Q H RY+ + +I + FFD V++ ++ +VR NRL Sbjct: 615 EEICLAMEVILIEKRLQVLCMHHRYYDALTIAITITSAVNAFFDNVIIMDENEDVRINRL 674 Query: 683 SLLQYIKNIILIVINVQ 699 +LL +KN+ L V ++ Sbjct: 675 TLLNKVKNLFLRVADIS 691 >gi|58696740|ref|ZP_00372283.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|225629952|ref|YP_002726743.1| glycyl-tRNA synthetase, beta subunit [Wolbachia sp. wRi] gi|58537077|gb|EAL60201.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|225591933|gb|ACN94952.1| glycyl-tRNA synthetase, beta subunit [Wolbachia sp. wRi] Length = 705 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 223/734 (30%), Positives = 348/734 (47%), Gaps = 73/734 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M L E SEEIP RMQ+ A + + + + V + +M + T R+ L++ + Sbjct: 1 MSLQLLFECLSEEIPPRMQNSATVQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNI 60 Query: 60 -SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + + E GP + A K AI+GFLR Q + + + D Y Sbjct: 61 NALELKDSNNEVKGPNINAPKSAIEGFLRKY--QKNEEDLLVRKVNNEDFYFIKRESCSF 118 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 I + LK + ++ W KSMRW W+RP+K+ILCIL ++II + Sbjct: 119 NIREFLKNQLEEMLKNFSWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPV 168 Query: 179 DLKEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 I N TYGHRF + + V++ Y LE+ V+L + R+ IL+ ++ Sbjct: 169 SFAGITASNTTYGHRFLSSGTALTVKAPKDYFELLEKNSVILQMDKRKQFILDQINKFTK 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFD-KKYLCLPEELIRLTIKTNQKCFVTRTRE 296 L+L ++ LL E+ GL+EW V G + +K LP+E+I + T QK Sbjct: 229 EQNLQLEKNDYLLNELTGLIEWPIVLFGEVNQEKSFGLPKEVILSIVNTQQKYLAL--SN 286 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + F+ + +V+G+ R++ ARL DA +D+ Sbjct: 287 GKRISHFV----TVVNVNNGEVVKGHERILEARLADAQFLISQDKKEN------------ 330 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAI 415 LD + +L ++FHA +G+ GE+V RI L K IA I A + V+RA Sbjct: 331 --------LDYYVKKLG--SILFHASLGSVGEKVKRITALSKYIAIFIPHASLIKVERAA 380 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL T IVREFPELQG +G YA E+ +AI EH KP GP + P + +I Sbjct: 381 YLAKADLATSIVREFPELQGVMGGYYASYFQEDREIVEAITEHYKPIGPEQECPKSPSAI 440 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 VS+ADK+D+L+ A EK SGS D + LRR T+GIIR ILEN + IP+ I+ + Sbjct: 441 AVSIADKVDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILENNLHIPIRLMIDKSVSL 500 Query: 536 L--------------------------FFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLL 568 F +R K+ L +RDIR D++++IL + ++LL Sbjct: 501 YSRLLFNKNTTSVDKPNRKQISELVFRFCLERFKVILKNRDIRQDIVDSILYKIGINDLL 560 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRL 627 T L+ + S +GE+ L + KR+ +++ K + S ++L+ E L Sbjct: 561 TAEKQTVILDRYLSMPEGEQILSTYKRVSNMMSKVRKSDGTTYSASYGKRFLIENEEIAL 620 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 +I++++ + ++ D L I F D V +N D ++R NRLSLL+ Sbjct: 621 SNCAITACKNIKQAIKNNHFNAALDELAGFAPFINQFMDSVKINCDSDKLRRNRLSLLEN 680 Query: 688 IKNIILIVINVQKI 701 + +I +V + I Sbjct: 681 VVSIFHLVADFNLI 694 >gi|148269843|ref|YP_001244303.1| glycine--tRNA ligase [Thermotoga petrophila RKU-1] gi|166227930|sp|A5IKK4|SYGB_THEP1 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|147735387|gb|ABQ46727.1| Glycine--tRNA ligase [Thermotoga petrophila RKU-1] Length = 672 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 182/723 (25%), Positives = 332/723 (45%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H + L LLK + + + R + LK L Sbjct: 1 MRTALLEVGLEELPASEFHSILKQLEERSTELLKAYRISSGSAEVFVGSRRFGVILKNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE+ GP + G KA++GFLR+ + + G +YL+ + Sbjct: 61 ERQEDFTEEKKGPPLNVAYDENGKPTKALEGFLRNNNASLENVVHRE-----GYIYLSRV 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +E+VL + + + + K MRW + +IRP+ I+ + Sbjct: 116 VE-GKPVEEVLPDLFRDLVLGLNFRKPMRWGSGE-----HEYIRPVHWIVAM-----VDG 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL++ + I+YG R+HA IK+ + Y L++ V+ R+ +L Sbjct: 165 RVLDLEIFGLRSSRISYGKRYHA-GSIKIPDPERYYESLKKGFVISSHLERKKFVLEQID 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 G+++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 224 EFEKRSGMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFIA- 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + L N F+ + +V+G RV+ ARLEDA +++++D Sbjct: 283 -HKETLTNTFVAFQDG--PQPPENVVKGYERVINARLEDARYYFQKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQ---LIDADVAL 410 L PL++ +L ++VF K+GT ++V RI+ + +++ + L ++ Sbjct: 327 -------LETPLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISERLCEDLKLPESFTQK 377 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H P Sbjct: 378 VLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHYS------EEPQ 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + + Sbjct: 432 TVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKNKADAIFRIIRKNEWDISLEELLT 491 Query: 531 DQNLIL----------FFHDRLKLYL-HDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R +L ++ I D+ A+ L + + L E Sbjct: 492 FASSLVGYRLSEELETFFAGRFYQFLVNELGISFDVARAV-NHLWKRPLRGILSAEALQE 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I S+ E EK+L + + Sbjct: 551 ISEKPEFQDLFVGFERVHNITK------NHDSVRFDGALFEKEEEKKLMNKFYEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V ++R NRL L+ I + ++V ++ Sbjct: 605 KALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLGFLKNIDELFMMVGDMT 664 Query: 700 KIV 702 +V Sbjct: 665 YLV 667 >gi|257125160|ref|YP_003163274.1| glycyl-tRNA synthetase subunit beta [Leptotrichia buccalis C-1013-b] gi|257049099|gb|ACV38283.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia buccalis C-1013-b] Length = 678 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 202/723 (27%), Positives = 349/723 (48%), Gaps = 73/723 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +FL EI EE+PA+ KA +DL I+ LK E + + + + TP R+ +K L+ Sbjct: 2 NFLFEIGLEELPAQYVDKAEKDLKKIIENELKAERIKFSGIESFSTPRRVTAIIKDLAEK 61 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + ++ +GP V G KA +GF++S G T D +I ++ KG Sbjct: 62 QDDLDKKSVGPSVEIAYKDGQLTKAGEGFVKSQG-ATADDIKIIENE-KGKYISIEKFIA 119 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + ++L I+ AI+K+ + KSM+W+ F ++RP+K + + +I+ Sbjct: 120 GKNTREILPEILKNAIKKIEFEKSMKWADR-----TFRFVRPIKWFVTLFD----NGEIL 170 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 + + + GN T G R+ A I++ + Y + L E V++D E RR IL Sbjct: 171 PFEFEGLKGGNKTRGMRYFASQDIEINNPLDYEKILLENFVIVDGEKRREEILKSIRENG 230 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G + +K LL+E++ +VE+ G F K YL LPE++I +T++T+Q+ F + ++ Sbjct: 231 ENDGDTAIINKYLLDEVVNVVEYPYAIKGEFSKDYLELPEDIITITLETHQRYFPVKDKD 290 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G L+N FI++ N A + + +GN +VV RL DA F+ D N Sbjct: 291 GKLSNKFIVIRN--APEYSETVKKGNEKVVEPRLADAKFFFDEDLKN------------- 335 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD--VALVDRA 414 + +L +V F +GT E+V R + + + ++ + R Sbjct: 336 -------KFADNVEKLK--EVTFQKDMGTIFEKVKRSEKIAEYLISELNLTDKKENIIRT 386 Query: 415 IVLSKADLCTEIVR--EFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 + L+KADL + ++ EF +LQG +G YA Q E+ I EH PR + +PT Sbjct: 387 VDLAKADLVSNVIGEKEFTKLQGFMGSVYAEKQGEDKDVALGIFEHYLPRYQGDELPTTV 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 +ADK+DT+I +++ KP+ SKDPYALRRAT GII+++L +K+ + IE Sbjct: 447 EGAIAGIADKMDTIIGCFSVGLKPTSSKDPYALRRATQGIIQVVLNSKLSFNYKKLIEKA 506 Query: 533 NLI-----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIK 575 I FF R+ L ++ + DLI + E+ N++ + + Sbjct: 507 YEIFSADKKVLEKDVVKDVTEFFKQRIINVLSEK-YKKDLINYEINLES-NVVELDKKLS 564 Query: 576 HLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFG 635 L + + E + KR+ I+ K + I+ ++ + + EK L + Sbjct: 565 ELLKLSQTENFEILINLLKRVKNIV----KDEKNITTDVIFELFESKEEKALLDFANKL- 619 Query: 636 THIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIV 695 ESM++ + + L + + I FFD V++NVD+ ++R NR++LL+ ++ I + Sbjct: 620 ----ESMENNEFSNYIEELLNNADTINQFFDNVIINVDNGKLRTNRIALLKKLELSIDKM 675 Query: 696 INV 698 IN+ Sbjct: 676 INI 678 >gi|317012780|gb|ADU83388.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Lithuania75] Length = 701 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 198/734 (26%), Positives = 335/734 (45%), Gaps = 72/734 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L + + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFNKCALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQETKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDPKHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + K+ +D++ IV ++ + + KSMRW S+IRP+ +I + E+ Sbjct: 125 IHA-KQPTKDLIMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKTHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F T Sbjct: 237 KELETKHQIIVEIDRDLLDEVVAITEYPSALLGEFDKAFLKLPSEIITTSMKENQRYFAT 296 Query: 293 RTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNL 347 +++ L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FSQKSQEESPTLYNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEND------- 348 Query: 348 SSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL---- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 349 -------------LKKPLDNA----PLESVVFVQGLGTLKDKMEREAIIAQYLTQKYAPS 391 Query: 404 ----IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHL 459 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 LNMPLEKALELIGRAVRIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQY 451 Query: 460 KPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++II Sbjct: 452 LPASENAPLPSSVFSAIVALSLKLDSLFSLFSAGKIPSGSKDPFALRRLSFGLLKIIAHY 511 Query: 520 KIDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLT 569 ++ L F + F + L+ +L +R D +I ++L +++ Sbjct: 512 GLEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDIVK 571 Query: 570 IVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLY 628 I+ +K L F K + ++ I + +N S S E L+ Sbjct: 572 IIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSGFSISLFKELQEHALF 631 Query: 629 AVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYI 688 T ES+D K + + P+E +F VLV D E++ NR + L + Sbjct: 632 EAFDAIKTSAFESLDSK-----IEAYFGLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGV 686 Query: 689 KNIILIVINVQKIV 702 L + ++++I Sbjct: 687 YQSFLEIGDIKEIA 700 >gi|297815990|ref|XP_002875878.1| aminoacyl-t-RNA synthetase [Arabidopsis lyrata subsp. lyrata] gi|297321716|gb|EFH52137.1| aminoacyl-t-RNA synthetase [Arabidopsis lyrata subsp. lyrata] Length = 1083 Score = 601 bits (1551), Expect = e-169, Method: Composition-based stats. Identities = 175/736 (23%), Positives = 338/736 (45%), Gaps = 83/736 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 F++EI +EE+P + A+E L ++++ LL+++ + + ++ + TP RL + + +S Sbjct: 386 FIIEIGTEEMPPQDVINASEQLRVLVLELLEDQRLRHGAVKAFGTPRRLVVLVDAMSSKQ 445 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E GP G KA DGF R G+ +K K + A + +P Sbjct: 446 LEEEVEVRGPPASKAFDDQGNPTKAADGFSRRYGVPLEK--LYRKVSGKTEYVHARVTEP 503 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R +VL +P + K+ +PKSMRW+ S+ + RP++ ++ + + ++ Sbjct: 504 ARRALEVLSEDLPGILAKISFPKSMRWN------SSVMFSRPIRWVMAL-----HGDLVV 552 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPE-------------- 222 I GN++ G R A + VQ+ + Y + + + ++ E Sbjct: 553 PFSFAGISSGNVSCGLRNTASASLFVQNAESYEDAMRNSGINIEIEAFMDLCCHFIGYHN 612 Query: 223 --CRRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIR 280 R+ IL ++ LA +V LV +DLL E+ LVE +G F + +L LPEEL+ Sbjct: 613 LQERKKIILEKSNALAKSVNGRLVVPQDLLNEVANLVEAPVPLIGKFKESFLELPEELLT 672 Query: 281 LTIKTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 + ++ +QK F G L FI V+N ++ + +GN V+ AR EDA F++ D Sbjct: 673 IVMQKHQKYFSIIDESGQLLPYFIAVANGAINE--DVVKKGNEAVLRARYEDAKFFYEVD 730 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + R + ++FH K+GT ++++R++ + K+ Sbjct: 731 TRKRFSEF----------------------RDQLQGILFHEKLGTMLDKMNRLKKMVSKL 768 Query: 401 AQLIDADVAL---VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 ++ D L V+ A L+ +DL T +V EF L G + + YA+ + + +A+ E Sbjct: 769 CLALEIDEDLLPVVEDAASLAMSDLATAVVTEFTALSGIMARHYALRDSYSEQIAEALLE 828 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 PR + +P + +++AD+LD+L+ +A +PS + DP+ LRR + G+++I++ Sbjct: 829 ITLPRFSGDVIPKTDAGMVLAIADRLDSLVGLFAAGCQPSSTNDPFGLRRISYGLVQILV 888 Query: 518 ENKIDIPLS--------------QFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 E ++ + +++ F RL+ L D + +++ ++L Sbjct: 889 EKDKNVNFKRALELAASVQPTKVEANTVEDVYQFVTRRLEQLLVDNGVSPEVVRSVLAER 948 Query: 564 NDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA 623 +N + + K + + R +I+ K+ + +++ Sbjct: 949 GNNPCLAARTAYKMEKLSKGEIFPKIVEAYSRPTRIVR---GKDVGVGVKVDENAFETSQ 1005 Query: 624 EKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLS 683 E+ L+ + I ++ + + ++ + EP+E FF+ V V V++ VR NRL+ Sbjct: 1006 ERTLWRTYTSIKDRIHTGIEIEEFTEVSM---QLVEPLEDFFNNVFVMVEEERVRKNRLA 1062 Query: 684 LLQYIKNIILIVINVQ 699 LL I N+ VI++ Sbjct: 1063 LLNNIANLPTGVIDLS 1078 >gi|299783170|gb|ADJ41168.1| Glycyl-tRNA synthetase beta subunit (Glycine--tRNA ligase beta subunit) (GlyRS) [Lactobacillus fermentum CECT 5716] Length = 600 Score = 601 bits (1550), Expect = e-169, Method: Composition-based stats. Identities = 172/586 (29%), Positives = 283/586 (48%), Gaps = 69/586 (11%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 +LLE+ EE+PA + + + L + L EE + +++++ Y TP RL L + GL+ Sbjct: 5 YLLEVGLEEMPAHVVTPSIQQLKTRVANYLTEERIDFEDIQAYSTPRRLALLISGLADKQ 64 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK- 115 P+ E GP G KA GF R G I+ KG Y+ V + Sbjct: 65 PDVDESVKGPAKKIAQDADGNWTKAAIGFTRGQGATVDD---IEFKEVKGVEYVYVEKHI 121 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++VL + I + +P MRW + ++IRP+ ++ +L +++ Sbjct: 122 QGKPVDEVLAG-LNDVITAMNFPTLMRWGSFK-----LNFIRPIHWLVSLL-----DDQV 170 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + D+ + G +T GHRF ++++S Y+ L++ V++D R+ I + + Sbjct: 171 VPFDILNVTAGRLTRGHRFLGHD-VEIKSATDYVAALKDDFVIVDAAERKATIKDQIQAI 229 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 + D++LLEE+ LVEW F G+FD+KYL LPE ++ ++K NQ+ F R Sbjct: 230 VDQHNWVIDWDEELLEEVNNLVEWPTAFAGTFDQKYLELPEPVLITSMKDNQRFFCVRDH 289 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L FI V N A +++GN RV+ RLEDA F+ DQ Sbjct: 290 DGKLQPAFISVRNGNAV-HLDNVIKGNERVLVPRLEDAKFFFDEDQKM------------ 336 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVALVD 412 +DQ + RL +V FH +I + ++++R + L + Q + ++A + Sbjct: 337 --------TIDQYVDRLK--NVSFHDQISSMYDKMARTKALANLLGQQLGLSDQELADLA 386 Query: 413 RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNK 472 RA + K DL T++V EF ELQG +G+ YA EN + A+ EH P +P Sbjct: 387 RAASIYKFDLTTQMVGEFAELQGIMGEIYAKRFGENEAVAAAVREHYMPISADGALPQTT 446 Query: 473 ISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ 532 + +++ADKLD++ +F+A++ PSGS DPYALRR GI+R++ + K + L F Sbjct: 447 VGAVLAIADKLDSIYSFFAVDMIPSGSNDPYALRRQAYGIVRMLADRKWHLNLLDFQASA 506 Query: 533 NL--------------------ILFFHDRLKLYLHDRDIRHDLIEA 558 FF DRLK +RHD+++A Sbjct: 507 KQAVEQATPALGLDYAKNADAVTDFFIDRLKQLFSLDHLRHDIVDA 552 >gi|87302811|ref|ZP_01085622.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 5701] gi|87282694|gb|EAQ74652.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 5701] Length = 722 Score = 601 bits (1549), Expect = e-169, Method: Composition-based stats. Identities = 185/756 (24%), Positives = 317/756 (41%), Gaps = 91/756 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L + L + + + + TP RL + + L Sbjct: 1 MATFLLEIGTEELPADFARLALPQLEQQVRHDLAAQRLPHGLVEATSTPRRLVVRVADLP 60 Query: 61 PHSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + EER GP G A GF G+ S +D KG A L Sbjct: 61 LSQDDLAEERKGPPGGQAFVDGQPGPAAIGFANRCGVDPASLEL--RDTPKGPFVFARLL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 +P R ++VL +P I + + MRW + RP++ ++ +L ++ Sbjct: 119 QPGRPSKEVLAECIPAWIAGLQGRRFMRWGEGE-----LRFSRPVRWLVALL-----DQQ 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + L+ I G I+ GHR + + + + L EA VL++ + R + I Sbjct: 169 VIPVVLEGSDPLISSGRISRGHR-LSEQTLTIPDAGLHSELLAEAGVLVERQQRADWIRQ 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 ASA ++L EE++ LVE + GS + ++L LP E++ ++++Q+ Sbjct: 228 QVLAAASAAQARPDLPEELFEELVDLVESPSLIEGSVEPRFLNLPPEVLSTVMRSHQRYV 287 Query: 291 VTR-----------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 R + + L F+ + N + A + +GN RV+ ARL DA F + Sbjct: 288 PLRRLDAAEDPLALSAQASLLPRFLCIGNGLPA-AAATVRRGNERVLKARLADAEFFLQA 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ + +QR RL V F +G+ +R R+ L + Sbjct: 347 DR--------------------AISCEQRRERL--ASVTFAEGLGSLLDRSDRLLWLSEL 384 Query: 400 IAQLIDAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 + Q + RA L K DL +++V EFPELQG +G +YA+ + E+ + A+ Sbjct: 385 LLQHLSLTRDHQEAALRAAHLCKHDLVSQMVGEFPELQGVMGAKYALAEGESRAVALAVL 444 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH PRG + P++ V+LA++L+ L++ +A E+PSGS DPYALRRA G+++I+ Sbjct: 445 EHYLPRGAGDLPPSSDAGAVVALAERLELLLSIYAKGERPSGSSDPYALRRAGNGVLQIL 504 Query: 517 LENKIDIPLSQFIEDQ--------------------NLILFFHDRLKLYLHDRDIRHDLI 556 E + L ++ L+ R+ L + DL+ Sbjct: 505 WERGWSLNLINLLKQASAHWAQLLPDLQLDAPSLAGELVEALRLRMVSLLDEEGFDADLV 564 Query: 557 EAILRPEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI 610 +A+ + + + L + + +R ++ + + Sbjct: 565 QAVAGDGVPAERLLGDPIDGRKRVALLAQLRVDGQLAPVQAVVQRAARLAVKGDLPVDVL 624 Query: 611 SLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD-- 666 S + P +E + V+ + + RY Q+ L E + FFD Sbjct: 625 SPTAVVDPALFSSPSEAGMLQVLQELDPILSLPDGEIRYRQLASKLAEGAEALSAFFDGA 684 Query: 667 -QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+V DD VR NRL+LL ++N ++ + K+ Sbjct: 685 SSVMVMCDDPAVRRNRLNLLAVLRNQASVLADFSKL 720 >gi|317180185|dbj|BAJ57971.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori F32] Length = 700 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 197/733 (26%), Positives = 337/733 (45%), Gaps = 71/733 (9%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA+ +++ L L ++ + N+ ++TP RL L +K Sbjct: 5 ELLVEILVEELPAQALLNEYKEMPKKLHALFQKCALEVGNIEIFYTPRRLCLLIKDFPLL 64 Query: 63 SPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + E EE GP V GF + GL+ Q K +Y A Sbjct: 65 TQEIKEEFFGPPVKIACNNEDKTQGLNALGLGFYQKLGLKDHRHFQTAFKNNKEVLYHAK 124 Query: 113 LRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAK 172 + + K +D++ IV ++ + + KSMRW S+IRP+ +I + ED Sbjct: 125 IHE-KEPTKDLIMPIVLEFLESLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGEDFN 178 Query: 173 EKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDA 232 + I++ T HR I+V S Y LE+ V+LDP+ R IL + Sbjct: 179 D--IEVKEYGFKTKQATKVHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEI 236 Query: 233 HRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 L + + + D+DLL+E++ + E+ +G FDK +L LP E+I ++K NQ+ F Sbjct: 237 KELETKHRIIVETDRDLLDEVVAITEYPSTLLGEFDKAFLKLPREIIITSMKENQRYFAA 296 Query: 293 RTREG----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLS 348 +++ L N F++VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 297 FSQKSQESSTLHNGFVVVSNAINKD-KQKIIAGNQKVLKARLSDAVFFYEND-------- 347 Query: 349 SLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL----- 403 L KPLD + VVF +GT +++ R ++ + + Q Sbjct: 348 ------------LKKPLDNAP----LESVVFVQGLGTLKDKMEREAIIAQYLTQKYAPSL 391 Query: 404 ---IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ + L+ RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E Sbjct: 392 NMPLEKALELIGRAVKIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYL 451 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 P +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G+++I+ Sbjct: 452 PASENAPLPSSVFSAIVALSLKLDSLFSLFSAGKIPSGSKDPFALRRLSFGLLKIVAHYG 511 Query: 521 IDIPLSQ-----FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTI 570 ++ L F + F + L+ +L +R D +I ++L +++ I Sbjct: 512 LEFDLKADLKNLFEKVGVYQSFDLEILEKFLLERFHNLIDCNPSIIRSVLNTNERDIVKI 571 Query: 571 VDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYA 629 + +K L F K + ++ I + +N S E S E L+ Sbjct: 572 IQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNESSEFSTSLFKELQEHALFE 631 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 + T E +D K + S+ P+E +F VLV D E++ NR + L + Sbjct: 632 AFNAIKTSAFEGLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWGVY 686 Query: 690 NIILIVINVQKIV 702 L + ++++I Sbjct: 687 QSFLEIGDIKEIA 699 >gi|262038699|ref|ZP_06012059.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia goodfellowii F0264] gi|261747251|gb|EEY34730.1| glycyl-tRNA synthetase, beta subunit [Leptotrichia goodfellowii F0264] Length = 677 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 196/724 (27%), Positives = 352/724 (48%), Gaps = 76/724 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 DFL EI EE+P+R +A +L + LK+E + + + + TP R+ + +K +S Sbjct: 2 DFLFEIGLEELPSRYVDEAESNLKKLTENELKDERINFSEVESFSTPRRIAIIVKDISEK 61 Query: 63 SPEKIEERLGPRVGAG------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR-K 115 + ++ +GP V KA +GF++S G + I+ + K Y++V + Sbjct: 62 QEDLDKKSVGPSVDIAFKGGELTKAGEGFVKSQGAEKEDIKIIENEKGK---YISVEKFI 118 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +++L I+ ++K+ + KSM+W +F + RP+K + +L +I Sbjct: 119 KGKETKEILPDILSNIVKKIEFEKSMKWGEK-----SFRFARPIKWFVTLL-----GNEI 168 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 +D + + I N + G R+ A + + + Y + L+E V+ + R+ IL Sbjct: 169 LDFEFEGIKGSNKSRGMRYFASQDVAISNPSEYEKVLKENFVIAKKDKRKEEILKSIKEN 228 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 G + + + LLEE+I LVE+ G ++K YL LPE++ +T++T+Q+ F R + Sbjct: 229 CENDGEKAIINNYLLEEVINLVEYPYAIKGEYNKDYLKLPEDITTITMETHQRYFPVRDK 288 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 +G L N FIL+ N A + + +GN +V+ RL DA F+ D Sbjct: 289 DGKLTNKFILIRN--APEYSETVKKGNEKVIEPRLADAKFFFDED--------------- 331 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID--ADVALVDR 413 L + +L +V F +GT +++ R + + + + + + R Sbjct: 332 -----LKHKFSDNVEKLK--EVTFQKDMGTIYDKIKRSQKIAEYLINETGLQEEKENILR 384 Query: 414 AIVLSKADLCTEIV--REFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 + L+KADL T ++ +EF +LQG +G YA Q EN + I EH PR +++PT Sbjct: 385 TVELAKADLVTNVIAEKEFTKLQGFMGSVYAEKQGENKNVALGIFEHYLPRYQGDSLPTT 444 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +ADK+DT+ +++ KP+ SKDPYALRRA GII + L +K+ + IE Sbjct: 445 IEGALAGIADKIDTVTGCFSVGLKPTSSKDPYALRRAVQGIIYVTLNSKLKYDYKKLIEK 504 Query: 532 QNLI-----------------LFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLI 574 I FF R+ L ++ +LI + E+ N++ + + + Sbjct: 505 AYEIFAADKKVLEKNVVEDVTEFFKQRIINVLSEK-YSKELINYEVNLES-NVVNLDEKL 562 Query: 575 KHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDF 634 + L + + K EK + KRI IL K+ + ++ I+ E EK+LY+ + Sbjct: 563 EVLLKLSKTEKFEKLINLLKRIKNIL----KEEKGNAVSINENLFSTEEEKKLYSFAEEL 618 Query: 635 GTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILI 694 E++++K + + L E I FFD+V +N ++ E+++NR+SLL+ ++ I Sbjct: 619 -----ENVENKGFFICTETLIENEEIINNFFDKVKINDENPEIKNNRISLLKKLEKISDK 673 Query: 695 VINV 698 +IN+ Sbjct: 674 IINL 677 >gi|170288528|ref|YP_001738766.1| glycyl-tRNA synthetase, beta subunit [Thermotoga sp. RQ2] gi|238688825|sp|B1L9T5|SYGB_THESQ RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|170176031|gb|ACB09083.1| glycyl-tRNA synthetase, beta subunit [Thermotoga sp. RQ2] Length = 672 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 180/723 (24%), Positives = 329/723 (45%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA H L LLK + ++ + R + L L Sbjct: 1 MRTALLEVGLEELPASEFHSILRQLEEKSAELLKAYRISSGSVEVFVGSRRFGVILNNLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 + EE+ GP + G +A++GFLR+ + + G VYL+ + Sbjct: 61 ERQEDFTEEKKGPPLNIAYDENGKPTRALEGFLRNNNASLENVVHRE-----GYVYLSRV 115 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +E+VL + + + + K MRW + ++RP+ I+ + Sbjct: 116 VE-GKPVEEVLPDLFRDLVLGLNFRKPMRWGSGE-----HEYVRPVHWIVAM-----VDG 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +++DL++ + I+YG R+HA I++ + Y L++ V+ R+ +L Sbjct: 165 RVLDLEIFGLRSSRISYGKRYHA-GSIEIPDPERYYESLKKGFVISSHLERKKFVLEQID 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 G+++ D++L+EEI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ F+ Sbjct: 224 EFEKRSGMKIERDEELIEEIVAITEYPRIVVGQFDRKYLELPEEIIVTAVKHHQRSFIA- 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + L N I V+ +V+G RV+ ARLEDA +++++D Sbjct: 283 -HKETLTN--IFVAFQDGPQPPENVVKGYERVINARLEDARYYFQKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADV---AL 410 L L++ +L ++VF K+GT ++V RI+ + +++ + + Sbjct: 327 -------LETSLEKMNEKLK--EIVFQEKLGTLYDKVERIKKISQRLCEDLKLPEMFTQK 377 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V A + KAD+ +++V EFPELQG +G+ YA+ + N AIE+H P Sbjct: 378 VLEAASICKADIASKVVYEFPELQGVMGRIYALREGINEEIATAIEDHYS------EEPQ 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD++DT++ +AI P+ SKDPY L+ I RII +N+ DI L + + Sbjct: 432 TVIGSILGIADRIDTIVGNFAIGNVPTSSKDPYGLKSKADTIFRIIRKNEWDISLEELLT 491 Query: 531 DQNLIL----------FFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + ++ FF R +L + I D+ A+ L I+ + L E Sbjct: 492 FASSLVKYHLSEELETFFAGRFYQFLINELGISFDVARAVNHLWKKPLRGILS-AEALQE 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I S + E EK+L + + Sbjct: 551 ISEKPEFQDLFVGFERVHNITK------NHDSTKFDGALFEKEEEKKLMNKFYEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V ++R NRLS L+ I + ++V ++ Sbjct: 605 KALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLSFLKNIDELFMMVGDMT 664 Query: 700 KIV 702 +V Sbjct: 665 YLV 667 >gi|257458792|ref|ZP_05623915.1| glycyl-tRNA synthetase, beta subunit [Campylobacter gracilis RM3268] gi|257443780|gb|EEV18900.1| glycyl-tRNA synthetase, beta subunit [Campylobacter gracilis RM3268] Length = 675 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 182/725 (25%), Positives = 325/725 (44%), Gaps = 79/725 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L+EI EE+PA K +++ +L+ + + R ++P R L+ + Sbjct: 2 ELLIEIGVEELPAIPFLKERANIAPKWRAVLEANRIN-SDFRFEFSPRRFVLFHEDFPQR 60 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 + G GA A F + G+ S+ + ++ K +Y A ++K Sbjct: 61 GDDAQIVSTGAPKSVALKDGAWSPAALSFAKKYGIS-ESELEFRQVGGKEVLYHAEVQK- 118 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 R ++L ++ ++ + + ++MRW + F +IRP++SI C+L ++ + Sbjct: 119 GRDSREILGEMIEEFLRSLNFGRAMRWGSGE-----FEFIRPIRSIACVLGGQN-----V 168 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 D ++ + + HR IK + Y LE V+L + R++ IL++ +L Sbjct: 169 DFEIYGVRSAAAFFPHRKFGYEAIKFKDAVDYFALLERNGVILSEQKRKDKILSEFAKLE 228 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 G ++ D LL+E+ + E+ +GSF++ +L +P+E+I ++K NQ+ F Sbjct: 229 KKHGFKIEVDPALLDEVTAITEYPTALLGSFERDFLSVPKEVIITSMKENQRYFPVF-EG 287 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L+N F++VSN D +V+GN +V+ ARL DA+ FWK D + LK+ Sbjct: 288 KNLSNHFVVVSNAITDDD-ELVVRGNEKVLRARLSDAMFFWKSDLQAEFSPEKLKQ---- 342 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRI----RVLGKKIAQLIDAD----- 407 + + +G+ ++ R R L A I+A+ Sbjct: 343 --------------------ISYMQALGSVYDKQVRELAVARALSADYATQIEAEIGKKD 382 Query: 408 -VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 V+ A++ SKADL + +V EF ELQG +G YA C AI E P G Sbjct: 383 FAQDVENAVMFSKADLSSTMVGEFSELQGIMGSYYAAHAGLADHVCRAIREQYLPSGEDS 442 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P+ S +++A K +TL+ ++IN+ PSG+KDPYALRRA G+I+I+L + + Sbjct: 443 ELPSGVFSSVIAIAMKFETLLGLFSINKVPSGNKDPYALRRAATGLIKILLNQGLSFDAN 502 Query: 527 QFIED----------QNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKH 576 + L+ F DRL + I +I+A + ++LL + IK Sbjct: 503 ALAQKLAPNYKKFDISKLLDFIKDRLYGIFDE--INPSVIKACIASGENDLLLLSKAIKA 560 Query: 577 LNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGT 636 L E ++A + + KR+ I+ E+ + AE+ L A Sbjct: 561 LGEIAAAADFGENFATFKRLANIIKDEK------IGAVDENLFEHGAERALNAAFRAIK- 613 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ L + I+ FFD V++NV D ++R NR++ + I L Sbjct: 614 -----LNENDVSGYLRSLFGLKGVIDDFFDNVMINVQDVKIRTNRIANIGQIYRAFLQFA 668 Query: 697 NVQKI 701 ++++I Sbjct: 669 DIKEI 673 >gi|254418766|ref|ZP_05032490.1| glycyl-tRNA synthetase, beta subunit [Brevundimonas sp. BAL3] gi|196184943|gb|EDX79919.1| glycyl-tRNA synthetase, beta subunit [Brevundimonas sp. BAL3] Length = 790 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 236/623 (37%), Positives = 334/623 (53%), Gaps = 51/623 (8%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 MP LLEI+SEEIPARMQ AA DL ++ LK G+ + + Y P RL L + GL Sbjct: 1 MPQLLLEIFSEEIPARMQQGAARDLERMVSDRLKAAGLTWDALTTYAGPRRLTLVIDGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +P++ EE GPR A ++A++GFLR TGL D ++D V AVL R Sbjct: 61 AATPDREEEVKGPRASAPEQALEGFLRKTGLT--RDQLTERDG----VLFAVLSSKGRAT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 D++ V I+ PWPKSMRW + W+RP+K ILC+ K++ ++ Sbjct: 115 TDLVAETVDQVIRTFPWPKSMRWGSG-----TLRWVRPIKRILCLFDG-----KVVPFEI 164 Query: 181 KEIPCGNITYGHRFHAPHPI-KVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 IP IT GHRF + KV Y LE+ VLLD R+ IL+ A +A Sbjct: 165 DGIPSDAITEGHRFLGSGQLLKVSDFVDYRTQLEQNFVLLDVADRKLRILDQAKAACAAK 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-V 298 GL LV+D LL+E+ GL EW +G D ++L LP E++RL++K +QK F R Sbjct: 225 GLVLVDDDGLLDEVAGLAEWPTPILGDMDPQFLALPPEVVRLSMKVHQKYFAVRDPSKDG 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 LA F++V+N++A+DGG A+ GNSRV++ARL DA FW DQ + + K Sbjct: 285 LAPNFLVVANVEATDGGKALAAGNSRVLSARLNDARFFWDEDQKVGFDAWNAK------- 337 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 + V FHAK+G+ +RV RI L ++IA L+ AD + A LS Sbjct: 338 ---------------LSGVTFHAKLGSLADRVERIAALAREIAPLVGADPDEAETAARLS 382 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA L + + DA+ +H KP+GP + VPT +++ V+ Sbjct: 383 KADLLSGMVSEFPELQGVMGGYYARLAGNSDAVADAVRDHYKPQGPADTVPTAPVTVAVA 442 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ-FIEDQNLILF 537 LADKLDTL+ F+AI+EKP+GSKDP+ALRRA LG+IR++LEN + L N +L Sbjct: 443 LADKLDTLVGFFAIDEKPTGSKDPFALRRAALGVIRLVLENGVRASLGALLAAFVNSVLR 502 Query: 538 FHD--RLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKR 595 H+ +L +L D + L L + + ++ F E L++ R Sbjct: 503 AHEMHKLSDWLVDLNETPSL------DGLKRLASATARLGYVAGFAGLTNEEAALVA--R 554 Query: 596 IFQILAIEEKKNREISLEISPQY 618 I+A E K+ + Sbjct: 555 SDSIVAQEYFKDAAWIDRLDTYL 577 Score = 179 bits (454), Expect = 2e-42, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 3/186 (1%) Query: 520 KIDIPLSQFIEDQ--NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHL 577 D+ L +++ +L+ FF DRL + L D+ RHDL+ A+ +D+L+ IV ++ L Sbjct: 604 GFDLELQAWVQGLVGDLVAFFADRLTVLLRDQGQRHDLVAAVFALGDDDLVRIVRRVEAL 663 Query: 578 NEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEA-EKRLYAVISDFGT 636 F ++ G L KR IL EEKK + + E L + T Sbjct: 664 AAFLATDDGANLLAGYKRASNILRAEEKKGPVPTGMVQTGLPNQPEPETVLAFAVGAART 723 Query: 637 HIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVI 696 ++ +++ + + L + P++ FF+ VLVN D RDNRL LL +++++ V Sbjct: 724 AVEAALETEDFAAAMTALARLRAPVDRFFEDVLVNSDVPAERDNRLKLLGQVRDVMGQVA 783 Query: 697 NVQKIV 702 + +I Sbjct: 784 DFGQIA 789 >gi|311087031|gb|ADP67111.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 690 Score = 598 bits (1543), Expect = e-168, Method: Composition-based stats. Identities = 204/691 (29%), Positives = 335/691 (48%), Gaps = 62/691 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y + LE+ ++ D R+ I+ D + Sbjct: 174 PGDIFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDRKV------------ 340 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV RA Sbjct: 341 --------KLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTPIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 K+Y+ I + S PI FF +V + Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKI 658 >gi|15616755|ref|NP_239967.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681510|ref|YP_002467895.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471191|ref|ZP_05635190.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11135203|sp|P57235|SYGB_BUCAI RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|254781844|sp|B8D8T6|SYGB_BUCA5 RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|25293201|pir||E84945 glycine-tRNA ligase (EC 6.1.1.14) beta chain [imported] - Buchnera sp. (strain APS) gi|10038818|dbj|BAB12853.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624353|gb|ACL30508.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 690 Score = 598 bits (1542), Expect = e-168, Method: Composition-based stats. Identities = 204/691 (29%), Positives = 335/691 (48%), Gaps = 62/691 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y + LE+ ++ D R+ I+ D + Sbjct: 174 PGDVFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDRKV------------ 340 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV RA Sbjct: 341 --------KLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTPIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEDDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 K+Y+ I + S PI FF +V + Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKI 658 >gi|222099442|ref|YP_002534010.1| Glycyl-tRNA synthetase beta subunit [Thermotoga neapolitana DSM 4359] gi|254781869|sp|B9K6R1|SYGB_THENN RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|221571832|gb|ACM22644.1| Glycyl-tRNA synthetase beta subunit [Thermotoga neapolitana DSM 4359] Length = 670 Score = 598 bits (1542), Expect = e-168, Method: Composition-based stats. Identities = 178/723 (24%), Positives = 329/723 (45%), Gaps = 77/723 (10%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M LLE+ EE+PA + E L LLK + ++ + R + L+GL Sbjct: 1 MRTALLEVGLEELPASEFYNILEQLETRTRELLKANRIQCDSIEVFVGSRRFGVLLRGLP 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 +EE+ GP + GA +A++GFLR + K G VY++ Sbjct: 61 EKQEGFVEEKKGPPLNVAYDSKGAPTRALEGFLRKNNATFEDIIE-----KDGYVYISR- 114 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + + +E+VL + + + + K MRW T + ++RP+ I+ +L + Sbjct: 115 KIEGKAVEEVLPEVFEDLVMGMSFKKPMRWGTGE-----YEYVRPVHWIVAML-----DD 164 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++++L L + +++YG R+H+ +K+ + + Y L+ V+ E R+ ++L Sbjct: 165 RVLNLTLFGLRASHVSYGKRYHS-GALKINTPEEYYEVLKSGYVMASHEERKKSVLKQLE 223 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 G+++ D+ L+ EI+ + E+ ++ +G FD+KYL LPEE+I +K +Q+ FV Sbjct: 224 DFERTYGMKVERDEALIAEIVAMTEYPRILVGQFDQKYLELPEEIIVTAVKHHQRAFVA- 282 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 + L N F+ + S +V+G RV+ ARLEDA +++ +D Sbjct: 283 -HKDGLTNFFVAFQDGPQS--SENVVKGYERVINARLEDARYYFHKD------------- 326 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DADVAL 410 L L + RL +VF ++GT ++V RI + +KI + + Sbjct: 327 -------LEMSLGEMNERLK--GIVFQERLGTLYDKVERIVKISRKICGELKFPEDFTEK 377 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V + L KAD+ +++V EFPELQG +G+ YA+ + + AIE+H P Sbjct: 378 VLKVASLCKADIASKVVYEFPELQGVMGRIYALKEGMDEELAFAIEDHYSEN------PE 431 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIE 530 I + +AD+LDT++ +AI P+ SKDPY L+ + RI+ +N+ D+ L + + Sbjct: 432 TVIGSVLGMADRLDTIVGNFAIGNIPTSSKDPYGLKGKADTVFRIVRKNEWDVSLEELLN 491 Query: 531 DQNLI----------LFFHDRLKLYLHDR-DIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 + FF R +L + + +D+ A+ L + L Sbjct: 492 FAASLVGFHLSNDLEEFFSSRFYQFLINEIGVSYDVARAV-NHLWKKPLRGTLAAEALQN 550 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + + +R+ I + + E E EKRL + + Sbjct: 551 ISERPEFQDLFVGFERVHNITKKHDSR------EFDGALFEKEEEKRLMNKFFEVKEKVL 604 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ++++ Y + L + I+ +FD V V V+ ++R NRL L+ I ++ +++ ++ Sbjct: 605 KALERLNYEEALQYLIELKPYIDEYFDNVFVMVNRDDLRMNRLGFLKNIDDLFMMIGDMS 664 Query: 700 KIV 702 +V Sbjct: 665 HLV 667 >gi|219682066|ref|YP_002468450.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254781845|sp|B8D740|SYGB_BUCAT RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|219621799|gb|ACL29955.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 690 Score = 597 bits (1541), Expect = e-168, Method: Composition-based stats. Identities = 204/691 (29%), Positives = 335/691 (48%), Gaps = 62/691 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y + LE+ ++ D R+ I+ D + Sbjct: 174 PGDVFNITSKNLLQNHLSLKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDRKV------------ 340 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ +DV RA Sbjct: 341 --------KLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSDVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTLIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 K+Y+ I + S PI FF +V + Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKI 658 >gi|313679910|ref|YP_004057649.1| glycyl-tRNA synthetase, beta subunit [Oceanithermus profundus DSM 14977] gi|313152625|gb|ADR36476.1| glycyl-tRNA synthetase, beta subunit [Oceanithermus profundus DSM 14977] Length = 697 Score = 597 bits (1540), Expect = e-168, Method: Composition-based stats. Identities = 185/730 (25%), Positives = 312/730 (42%), Gaps = 89/730 (12%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 + L EI +EE+PA +A DL + L + ++ + Y TP RL L ++GL Sbjct: 2 NLLFEIGTEELPAAYVPRALADLERLAAERLSAARLDFEAIETYATPRRLALVVRGLPEA 61 Query: 63 SPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 S E R GP A A GF R G++ K A + Sbjct: 62 SARVEEARRGPPEKAAFKDGKPTPAAAGFARKAGVEVADL------TVKDGYVWARVVHE 115 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 +L ++ ++ +P PK M W P ++RP++ ++ L E ++ Sbjct: 116 GEPTARILPELLAGLVRDLPAPKKMIWGAGDGP-----FVRPVRWLVARLDGE-----VL 165 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLA 236 +++ + G + GHRF P ++V + Y L +A V+ D RR ++ + LA Sbjct: 166 PVEVFNVSAGRTSRGHRFLGPDVVEVD-AETYRDALYDAHVVADVAQRRERVVLETATLA 224 Query: 237 SAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTRE 296 + G E V +DL+EE+ LVEW MGSF ++YL LP+E++ + +Q+ F R Sbjct: 225 LSEGYEAVLPEDLVEEVTHLVEWPVAVMGSFSQRYLELPDEVLATVMIQHQRFFPVRVPG 284 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 L N FI VS Q D + + G +V+ R+ DA FW D Sbjct: 285 ERLTNRFIGVSGHQPPD-LSVVRAGYEQVLEGRIYDAYFFWTED---------------- 327 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIV 416 L PL + +L + F +GT ++ R+R +K+ + D ++ A Sbjct: 328 ----LKTPLTEHHKKL--AGINFQRGLGTMADKAERVRQAAEKLGGRLGLDEEVLREAAA 381 Query: 417 LSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISIT 476 L KADL T++V EFPEL+G + + Y Q + A+E+ ++P GP ++P Sbjct: 382 LYKADLPTQMVYEFPELEGVMARAYGEKQGLDPRVARALEDAVRPTGPEASLPETPEGAL 441 Query: 477 VSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQF-------- 528 ++ D+ DTL+ F+ + +KPSGS DPY LRRA G++RI+ +PL Sbjct: 442 LAALDRADTLVGFFHLGKKPSGSADPYGLRRAAAGLVRILGRTGWALPLEDVLEAAAEAY 501 Query: 529 ---------IEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 Q F +RL+ L + + + A + ++ + + + E Sbjct: 502 RARGLEVSPEAVQAARAFAEERLESLLTEAGLPTLAVRA--AQKAPSVYGKMLRARLVYE 559 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 + + KR + + E + E P+ E E RL ++ + Sbjct: 560 LMQRPEFAELTRLYKRAANLASQSES-----TREPDPELFETEEEARLLESLAPTRRAVG 614 Query: 640 ESMDHKR-------------------YHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 E ++ + + ++ ++ F D VLV VDD VR+N Sbjct: 615 ELLERGAELLPPWDPAAPLPNVDLAPLTEPLAQILALAGALDPFMDHVLVMVDDAAVREN 674 Query: 681 RLSLLQYIKN 690 RL+LL+ +++ Sbjct: 675 RLALLRGVRD 684 >gi|315500103|ref|YP_004088906.1| glycyl-tRNA synthetase, beta subunit [Asticcacaulis excentricus CB 48] gi|315418115|gb|ADU14755.1| glycyl-tRNA synthetase, beta subunit [Asticcacaulis excentricus CB 48] Length = 759 Score = 597 bits (1539), Expect = e-168, Method: Composition-based stats. Identities = 247/800 (30%), Positives = 376/800 (47%), Gaps = 139/800 (17%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L+E++SEEIPARMQ +AA D + K +G+I+ +++ Y P RL L+++GL Sbjct: 1 MAQLLIELFSEEIPARMQLQAARDFERLFGDRAKAQGLIWHSLKAYVGPRRLALHVEGLP 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 EE GP+ GA ++A+ GFLR GL D + ++ V++A + KP + Sbjct: 61 LEQAAVTEEVKGPKDGAPEQAMAGFLRKVGLT--QDQLVLENG----VWMARIEKPAKRT 114 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 +VL I+ I PWPKSMR T S+F W+RPLK IL + K+I L + Sbjct: 115 AEVLPGILEDVILTFPWPKSMRSGT-----SSFRWVRPLKRILFLFDG-----KVIPLSV 164 Query: 181 KEIPCGNITYGHRFHAP-HPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 + G++T GHR + V+ Y L + V+LD R++ IL+ A+ +A Sbjct: 165 GGVTSGDLTQGHRVLSSLEAFAVKDFADYQLKLRDNFVILDHIERQSLILDKANEACAAA 224 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT-REGV 298 G L++D LLEE+ GL EW +G D K+L LP E+I+ +++T+QK F R G Sbjct: 225 GCALMDDPGLLEEVAGLNEWPTPLLGDMDPKFLSLPPEVIKTSMRTHQKYFAVRDLSTGK 284 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 +A FI+V+N A+DGGA I +GN++V++ARL D + FW D Sbjct: 285 MAAKFIIVANQVANDGGAEIRRGNAKVLSARLSDGVFFWSEDNR---------------- 328 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLS 418 D + +L+ V +HAK+GT +RV+RI L + IA L+ ADV+L A L+ Sbjct: 329 ---KGNFDAWLQKLN--GVTYHAKLGTMAQRVARIEALAEVIAPLVKADVSLAKSAAHLA 383 Query: 419 KADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVS 478 KADL + +V EFPELQG +G YA +AI EH KP+GP ++VP + V+ Sbjct: 384 KADLASYMVGEFPELQGVMGGYYAEAARLPGDVAEAIREHYKPQGPSDSVPEGAVPAAVA 443 Query: 479 LADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLILFF 538 LADK+DTL+ F+AI+EKP+GSKDPYALRRA LGI+RI+ ++ + LS+ + L Sbjct: 444 LADKIDTLVGFFAIDEKPTGSKDPYALRRAALGILRILRQHNVRASLSELVAAWYQSLLI 503 Query: 539 H---------------------------DRLKLYLH----------------DRDIRHDL 555 + + YL DRD DL Sbjct: 504 YAGEGRAVYVDTDNWRGSAGPRWAAGETEVYDNYLRDFRAGLLESTVFVIPTDRDYDLDL 563 Query: 556 --------------------IEAILRPENDNLLTIVD--------LIKHLNEFFSSAKGE 587 A+ D + + F+ + Sbjct: 564 QFEHVANTPKVDNALLTFRDFRAVSAEFADFFADRLKVMLKDEGVRFDVVEAGFALKDDD 623 Query: 588 KFLLSAKRIFQILAIEEKKNREISLEISPQYLLLE--------------AEKRLYAVISD 633 + + +I A+E E+ Y AE +L + + Sbjct: 624 M----VRTVGRIKALESVLATPAGTELQAAYTRFANILNAEAKKGALPTAEPKLLSGAPE 679 Query: 634 FGTHI-----------QESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRL 682 T + + +D +++ + D L + ++ F D VLVN D R+NRL Sbjct: 680 VETALTQQVIALTPVLERLIDAEQFEEALDKLAGLHGAVDAFLDGVLVNSDVAAERENRL 739 Query: 683 SLLQYIKNIILIVINVQKIV 702 SLL ++ + V ++ K+ Sbjct: 740 SLLSALRRLFDGVGDLSKLA 759 >gi|311086449|gb|ADP66530.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 690 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 203/691 (29%), Positives = 335/691 (48%), Gaps = 62/691 (8%) Query: 4 FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHS 63 L+EI +EE+PAR+ K + I L + Y+N++ + TP RL L +K + Sbjct: 6 LLIEIGTEELPARLLSKISLYFYKNFIKELDFHNISYKNIKYFSTPRRLALKIKDIDITE 65 Query: 64 PEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 ++ GP + G +A +L+ G+ ++K + KG+ RK Sbjct: 66 RFVEIKKRGPSIINSYDKDGFLTEAATRWLKHCGININQAIRLKNE--KGEWLFYKTRKK 123 Query: 117 KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKII 176 + IE ++ I A++ + KSMRW + + RP+++I+ +L +K+I Sbjct: 124 QENIESLIPKITESALKNISIKKSMRWGQDNQ-----KFSRPIRNIVILL-----DKKVI 173 Query: 177 DLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIR-DLEEAMVLLDPECRRNAILNDAHRL 235 D+ I N+ H IK++ Y + LE+ ++ D R+ I+ D + Sbjct: 174 PGDVFNITSKNLLQNHLSSKDSQIKIKDAKDYPKILLEKNNIIADYFIRKEKIIEDIENI 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A + + ++ L+EE+ LVE + + +F +K+L +P++++ TI+ QKCF Sbjct: 234 AKKIKGFIKKNNVLIEEVTALVESPKALLVNFQEKFLQIPKKILINTIEKKQKCFPIYNS 293 Query: 296 EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESAL 355 E L FI +SNIQ + I+ GN RV+ ARL DA F+K D+ Sbjct: 294 EKKLLPYFIFISNIQTQESEKIII-GNQRVMHARLSDAEFFFKNDRKV------------ 340 Query: 356 KFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAI 415 L+ R+ L + V+F +G+ E+ RI++L K IA+ ++V RA Sbjct: 341 --------KLESRL--LSLKKVLFQNNLGSLYEKTLRIKLLIKWIAKYSSSNVEDSIRAA 390 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 +LSK DL T++V EFPELQGKIG YA+ E A+EE PR + +P I Sbjct: 391 LLSKCDLVTDVVCEFPELQGKIGMYYALEDKEKKDVATALEEQYLPRFSGDKLPCTPIGC 450 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQ--- 532 +S+ADK+DTL + I PS KDP+ALRR +GIIRIILE I + L I+ Sbjct: 451 GLSIADKMDTLSGMFYIGNIPSSDKDPFALRRLAIGIIRIILEKNIPLNLEDLIKKSLSL 510 Query: 533 -------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDLIKHLNE 579 +I FF RL + + +I+++L ++ L+ I I+ ++ Sbjct: 511 YNKKNEEDLILFDKMIKFFMIRLFHWYEETGYSAKIIKSVLSCKSIELIDIHKKIQAISF 570 Query: 580 FFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 F + +LS KRI ILA E++K I+ +I+ + ++ + E L+ I +F + + Sbjct: 571 FKKLKDSQSIILSIKRISNILAKEKEK---INGDINKKLMIEKEEIILFNNIEEFDNYTK 627 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLV 670 K+Y+ I + S PI FF +V + Sbjct: 628 NLFLEKKYNDILIKIKSFENPIYNFFKKVKI 658 >gi|318041339|ref|ZP_07973295.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. CB0101] Length = 721 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 180/752 (23%), Positives = 309/752 (41%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L ++ L E + + +R TP R+ L + L Sbjct: 1 MSTFLLEIGTEELPADFARLALPQLEQMVRRDLSEARLGHGAIRCTSTPRRIALQVHDLQ 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P+ EER GP G A +GF + G+ ++++ P KG A + Sbjct: 61 SAAPDLEEERKGPPAAQAFKDGVPTPAAEGFAKRCGIAA-EALEVRETP-KGPFVFATVL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L + +P I + + MRW + S + RP++ ++ +L E + Sbjct: 119 ERGRPAPELLSSWIPQWISSLQGRRFMRWGSGES-----RFSRPVRWLVALLDREVVPVR 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 ++ E+ GN + HR H + + S Y L A V +D R I + + Sbjct: 174 -LEGSDPEVVSGNSSRSHRLHG-GAVAINSASAYDEALAAAGVQVDRSQRAAWIRDTVAK 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR- 293 A ++ DL EE+ LVE + GS D+ YL LP E++ ++ +Q+ Sbjct: 232 AAESLEATADLPNDLFEELTDLVEAPLLIEGSVDEHYLALPAEVLSTVMRAHQRYVPLYR 291 Query: 294 ----------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 L F+ + N + + +GN RV+ ARL DA F D+ Sbjct: 292 RGADQDPLALDARTSLLPRFLCIGNGLP-EALDTVRRGNERVLKARLADAEFFVNADRAV 350 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 R + V F A +G+ +RV R+ + + + Sbjct: 351 PSIDR----------------------RDQLARVTFAAGLGSLLDRVERLEWITDVLLEQ 388 Query: 404 I---DADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 + +A A A L K DL +++V EFPELQG +G +Y + + E A+ EH Sbjct: 389 LALPEATAAHARHAAHLCKHDLVSQMVGEFPELQGVMGGKYLLAEGEPREVALAVLEHYL 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PRG +++P + V+LA++L+ L++ +A E+PSGS DPYALRRA G+++I+ Sbjct: 449 PRGAGDDLPASDAGAVVALAERLELLLSIYAKGERPSGSSDPYALRRAGNGVLQILWAKG 508 Query: 521 I--------------------DIPLSQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAI- 559 D + +L R++ L + DL++A+ Sbjct: 509 WRLDLLQLLQRACAHWAVLLPDFKVEAGALAADLGDLLRQRVQSLLEEVGTDADLVQAVA 568 Query: 560 -----LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLE- 613 L + + L + +S R ++ + +S Sbjct: 569 GDSVPLERLLRDPADARERADLLMQLRASGDLAAVQAVVTRAARLAEKGDLSATVLSAAG 628 Query: 614 -ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 ++ +E + VI + + RY Q+ L + + FFD V+ Sbjct: 629 VVNAALFEKSSEAGMLQVIDQLEP-VATATGADRYSQLAQGLIAGTAALAAFFDGDQSVM 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V DD +R NRL+LL ++N ++ + +I Sbjct: 688 VMADDPAIRTNRLNLLGVLRNQASVLADFSRI 719 >gi|329924044|ref|ZP_08279307.1| glycine--tRNA ligase, beta subunit [Paenibacillus sp. HGF5] gi|328940883|gb|EGG37191.1| glycine--tRNA ligase, beta subunit [Paenibacillus sp. HGF5] Length = 494 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 159/531 (29%), Positives = 265/531 (49%), Gaps = 49/531 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M D L EI EE+PAR A E L L+ L + + + + TP RL ++++ + Sbjct: 1 MSKDLLFEIGLEEVPARFLRAAMEQLQDKLVKWLDASRIAHGEVTAFATPRRLAVWVQNV 60 Query: 60 SPHSPEKIEERLGPR-------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAV 112 + + EE GP G KA GF +S G+ S G Y+ V Sbjct: 61 ADKQEDVSEEVKGPSRKIALDDSGQWSKAALGFAKSQGVDPES---FTFKELGGVEYIYV 117 Query: 113 LRKP-KRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + +L + + + +PK+MRW F ++RP+K ++ +L +E Sbjct: 118 TKNSVGVDTKSILSEGLLGILTSMTFPKNMRWGAHE-----FKFVRPIKWMVAMLGSET- 171 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 +DL++ + GN+T GHRF + + Y L E V++D + R+ I++ Sbjct: 172 ----VDLEITGVKAGNVTRGHRFLGGEAV-IPEASAYRDVLREQHVIVDVDERQEMIVSQ 226 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 LA + DLLEE++ LVE V GSFD +L +P+E++ +++ +Q+ F Sbjct: 227 IQALAQEKDWNIAIKDDLLEEVLFLVETPTVLYGSFDSSFLHIPQEVLITSMREHQRYFP 286 Query: 292 TRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLK 351 ++G L F+ V + + I +GN +V+ ARL DA F++ DQ Sbjct: 287 VLDKQGQLLPYFVTVRSGDSR-SLDVIARGNEKVLRARLSDAKFFYEEDQKL-------- 337 Query: 352 ESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALV 411 + +++L+ +VFH ++GT G++V RIR + +++ ++ Sbjct: 338 ------------QIKDALSKLE--SIVFHEELGTIGDKVRRIRRISDQLSAKLNVSADAA 383 Query: 412 D---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENV 468 D RA + K DL T++V EFPELQG +G++YA E A+ EH +PR ++V Sbjct: 384 DSVSRAADICKFDLVTQMVYEFPELQGVMGEDYARKAGEKEHVAKAVFEHYQPRFAGDSV 443 Query: 469 PTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILEN 519 P+ + VS+ADK+DT++ ++I P+GS+DPYALRR GI++IILE+ Sbjct: 444 PSTMVGSIVSIADKIDTIVGCFSIGIIPTGSQDPYALRRQAAGIVQIILEH 494 >gi|42520058|ref|NP_965973.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409795|gb|AAS13907.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 705 Score = 594 bits (1533), Expect = e-167, Method: Composition-based stats. Identities = 221/734 (30%), Positives = 350/734 (47%), Gaps = 73/734 (9%) Query: 1 MP-DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M L E SEEIP RMQ+ A + + + + V + +M + T R+ L++ + Sbjct: 1 MSLQLLFECLSEEIPPRMQNVVATQVKSCIANVFNKNNVKFTSMEVFITARRITLFVDNI 60 Query: 60 -SPHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKR 118 + + E GP + A K AI+GFLR Q + + + D Y Sbjct: 61 NALELKDSNNEVKGPNINAPKSAIEGFLRKY--QKNEEDLLVRKVNNEDFYFIKRESCSF 118 Query: 119 LIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDL 178 I + LK + ++ W KSMRW W+RP+K+ILCIL ++II + Sbjct: 119 NIREFLKNQLEEMLKNFSWLKSMRWGEGKE-----RWVRPIKNILCIL-----NDEIIPV 168 Query: 179 DLKEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLAS 237 I N TYGHRF + + V++ Y LE+ V+L + R+ IL+ ++ Sbjct: 169 SFAGITASNTTYGHRFLSSGTALTVKAPKDYFELLEKNSVILQMDKRKQFILDQINKFTK 228 Query: 238 AVGLELVEDKDLLEEIIGLVEWVQVFMGSFD-KKYLCLPEELIRLTIKTNQKCFVTRTRE 296 L+L ++ LL E+ GL+EW V G + +K LP+E+I + T QK Sbjct: 229 EQNLQLEKNDYLLNELTGLIEWPIVLFGEVNQEKSFGLPKEVILSIVNTQQKYLAL--SN 286 Query: 297 GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALK 356 G + F+ + +V+G+ R++ ARL DA +D+ Sbjct: 287 GKRISHFV----TVVNVNNGEVVKGHERILEARLADAQFLISQDKKEN------------ 330 Query: 357 FNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI-DADVALVDRAI 415 LD + +L ++FHA +G+ GE+V RI L K IA I A + V+ A Sbjct: 331 --------LDYYVKKLG--SILFHASLGSVGEKVKRITALSKYIAIFIPHASLIKVECAA 380 Query: 416 VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISI 475 L+KADL T IVREFPELQG +G YA E+ +AI EH KP GP + P + +I Sbjct: 381 YLAKADLATSIVREFPELQGVMGGYYASYFQEDKEVVEAITEHYKPIGPEQECPKSPSAI 440 Query: 476 TVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI 535 VS+ADK+D+L+ A EK SGS D + LRR T+GIIR ILEN + +P+ I+ + Sbjct: 441 AVSIADKVDSLVGLIAAGEKISGSYDQFGLRRMTIGIIRTILENNLHVPIRLMIDKSVSL 500 Query: 536 L--------------------------FFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLL 568 F +R K+ L +RDIR D++++IL + + ++LL Sbjct: 501 YSRLLFNKNTASVDKPNRKQISELVFRFCLERFKVILKNRDIRQDVVDSILYKIDINDLL 560 Query: 569 TIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRL 627 T L+ + S+ +GE+ L + KR+ +++ K + S ++L+ E L Sbjct: 561 TAEKRTVILDRYLSTPEGEQILSTYKRVSNMMSKARKSDGTTYSASYGKRFLIESEEIAL 620 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 +I++++ + ++ D L S I F D + +N D ++R NRLSLL+ Sbjct: 621 SNCAITACKNIKQAIKNNHFNVALDELASFAPFINKFMDSIKINCDSDKLRRNRLSLLEN 680 Query: 688 IKNIILIVINVQKI 701 + +I +V + I Sbjct: 681 VVSIFHLVADFNLI 694 >gi|317969808|ref|ZP_07971198.1| glycyl-tRNA synthetase beta subunit [Synechococcus sp. CB0205] Length = 721 Score = 594 bits (1532), Expect = e-167, Method: Composition-based stats. Identities = 181/756 (23%), Positives = 314/756 (41%), Gaps = 92/756 (12%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+PA A L + L + Y + TP RL + + LS Sbjct: 1 MSTFLLEIGTEELPADFARLALPQLEQAVKRDLSAARLSYGQVETTSTPRRLVVQVSDLS 60 Query: 61 PHSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 +P+ +ER GP G +A GF + G+ + +D KG A + Sbjct: 61 ESAPDLRDERKGPPAAQAFKDGVPTQAAIGFAKRCGIDPAALE--VRDTPKGPFVFAEVL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + R ++L +P I + + MRW S + RP++ ++ +L +E Sbjct: 119 EAGRPARELLAETIPQWIAALQGRRFMRWGVGES-----RFSRPVRWLVALLGSE----- 168 Query: 175 IIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILN 230 +I + L + G + GHR ++ + + S D Y L +A V+++ R + I Sbjct: 169 LIPVTLSGSDPVVQSGQTSRGHRLYS-DAVAIPSADAYAAALADAGVVVNRSDRASFIRM 227 Query: 231 DAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCF 290 R A+A+ DL EE+ LVE + GS YL LP E++ ++ +Q+ Sbjct: 228 SVERSAAALDAVPDLPSDLFEELTDLVETPLLIEGSVADHYLALPAEVLSTVMRAHQRYV 287 Query: 291 VTR-----------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 L F+ + N A + ++ +GN RV+ ARL DA F + Sbjct: 288 PLYRKDADSDPLALDARKSLLARFLCIGNGLA-EASDSVRRGNERVLKARLADAEFFVQA 346 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D+ + R + V F +G+ +RV R+ L Sbjct: 347 DRA----------------------VASAERRELLKRVTFAEGLGSLLDRVERLEWLTAL 384 Query: 400 IAQLIDADVALVD---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIE 456 +A+ ++ + D RA + K DL +++V EFPELQG +G +Y + + E A+ Sbjct: 385 LAEQLELPNQVADHATRAAHMCKHDLVSQMVGEFPELQGVMGGKYLLAEGEPREVALAVL 444 Query: 457 EHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRII 516 EH +P+G + +P++ V+LA++ + L++ +A E+P+GS DPYALRRA GI++I+ Sbjct: 445 EHYQPKGAGDALPSSVAGAVVALAERFELLLSIYAKGERPTGSSDPYALRRAGNGILQIL 504 Query: 517 LENKIDIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLI 556 + + + +E Q L RL+ L + I DL+ Sbjct: 505 WDQGWSLNIKTLLERATQHWAKLLPHFKVDAAALAQELSELMGQRLQSLLEEAAIDSDLV 564 Query: 557 EAI------LRPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREI 610 +A+ L + L S + R ++ + + Sbjct: 565 QAVAGETVSLERLLADPGDARQRASLLQSLRSGGELTAVQAVVTRAAKLATKGDLPQTVL 624 Query: 611 SLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF--- 665 S + +E + +V++ + D RY Q+ L + + FF Sbjct: 625 SASAVVDASLFEKSSEAGMLSVLNSLEP-VATGSDPDRYAQLAQGLIAGASALANFFDGE 683 Query: 666 DQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 D V+V +D +R NRL+LL + N ++ + +I Sbjct: 684 DSVMVMAEDSSIRANRLNLLGVLNNQASVLADFSRI 719 >gi|291276980|ref|YP_003516752.1| glycyl-tRNA synthetase subunit beta [Helicobacter mustelae 12198] gi|290964174|emb|CBG40019.1| glycyl-tRNA synthetase beta chain [Helicobacter mustelae 12198] Length = 688 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 192/731 (26%), Positives = 339/731 (46%), Gaps = 80/731 (10%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 + +EI+ EE+PA + ++ + L+ + + ++TP R+ L+ + Sbjct: 3 SELFIEIFVEELPALPFLREFKNFATKWQEALQRHSIPPIQTQFFYTPRRIVLFCEQFPI 62 Query: 62 HSPEKIEERLGPRVGAG----------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLA 111 + E+ +E GP V A + FL+ LQ C +K K +V + Sbjct: 63 RTQEEKKEIFGPPVDVAFEKGDKNAPLTAAGEAFLKKNHLQIEQLCYAQKGGK--EVLFS 120 Query: 112 VLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDA 171 + + + ++L I+ +Q + + K MRW +IRP+++I+ L Sbjct: 121 LQVQEGVSLTEILPQILKSFLQSLHFGKHMRWGNVTED-----FIRPIRNIMIFL----- 170 Query: 172 KEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 E+ + I T HR +V++ Y + L E V+LD E RR IL+ Sbjct: 171 GEEFVPFVGYGIEARPQTKLHRDFGLDWQEVKNFADYCKKLNEGGVILDQEERREKILSS 230 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 L + + + D +LL+E++ + E+ QV +G F++++L LP+E+I ++K NQ+ F Sbjct: 231 IISLEKSQNIAVEVDGELLDEVVAITEYPQVILGHFEERFLELPKEVIITSMKENQRYFA 290 Query: 292 TRTREG--VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 + L N F++VSN + D G IV GN +V+ ARLEDA+ F+ D + + Sbjct: 291 VYQDKSLQHLKNHFVMVSNSTSKDEG-IIVLGNQKVLRARLEDAMFFYHNDCKKGLSNAG 349 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVA 409 L++ ++F G+ ++V R + + + + Q D Sbjct: 350 LEK------------------------LLFIEGAGSMQDKVKREQKIAEFLIQRFDCQEL 385 Query: 410 LVDRAI-----VLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGP 464 +A LSKADL +E+V EF LQG +G YA++ ++ S I+E P G Sbjct: 386 SAKKAQILECIELSKADLLSEMVYEFSNLQGVMGYYYALVIKKDPSIALGIKEQYLPLGE 445 Query: 465 LENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIP 524 +P+ S V+LA K D ++ +++ + P+GSKDP+ALRRA GI+RIIL+ D Sbjct: 446 HSALPSTPFSAIVALAHKFDNILTLFSVGKIPTGSKDPFALRRAANGILRIILQESFDFD 505 Query: 525 LSQ------------FIEDQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 L Q + Q + FF +R+ L L++++L +N+ I D Sbjct: 506 LEQDLAKMLRILDLDLSQTQKIATFFIERMDGLLQQ---NRALLKSVLATNEENICRIFD 562 Query: 573 LIKHLNEFFSSA--KGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 L E F+ + + + + KR+ IL K++ EIS + L+ EAE+ LY Sbjct: 563 KAHALGEIFTGDGIEQGELVATFKRVANIL-----KSKIPLGEISQELLIEEAEQTLYHD 617 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKN 690 + Y L + ++ FFD+V+VNV++ ++ NR+ L+ +I Sbjct: 618 FLQVCAK----NESGDYLIRLKNLCGLKGSLDDFFDKVMVNVENPALKQNRIQLIAHIYE 673 Query: 691 IILIVINVQKI 701 L + ++++I Sbjct: 674 EFLQIADIKEI 684 >gi|296125974|ref|YP_003633226.1| glycyl-tRNA synthetase, beta subunit [Brachyspira murdochii DSM 12563] gi|296017790|gb|ADG71027.1| glycyl-tRNA synthetase, beta subunit [Brachyspira murdochii DSM 12563] Length = 697 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 191/741 (25%), Positives = 343/741 (46%), Gaps = 84/741 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M D L+EI EEIPA + A+ I+ LK GV ++++ Y TP RL + + + Sbjct: 1 MKDLLIEILVEEIPADFAYPASISFKKIMEETLKSNGVNFKSVTAYTTPRRLSILAEDVE 60 Query: 61 PHSPEKIEERLGP------RVGAGKKAIDGFLRSTGLQT-----ISDCQ------IKKDP 103 S +++ E GP + G KA +GFL+S + I + + IK+ Sbjct: 61 EKSKDEVVEFRGPLFESALKDGVLTKAGEGFLKSHNIDAGLMKNIDENEAFNRPYIKEVN 120 Query: 104 KKGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSIL 163 K K + + + ++ + K+ + K MRW+ F+++RP++++L Sbjct: 121 GK-KYLFVKEEKKGVETKKLFEEVLEDIVSKIDFKKKMRWADKD-----FAFVRPIRNVL 174 Query: 164 CILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPEC 223 + ++II + I N GHR +P ++ + Y + L E V++ E Sbjct: 175 ALF-----GDEIIKTSVAGIETNNKITGHRLLSPEFTEIHNPKDYEKVLLEKHVVVSREK 229 Query: 224 RRNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTI 283 R I++ + G E V K + E ++ LVE + FD K+L +P+E++ + Sbjct: 230 RLENIISQLENIEKEFGFEAVSKKKVSEIVVDLVEEPYLLTAEFDSKFLEVPKEVLTSEM 289 Query: 284 KTNQKCFVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 +QK F ++G L N F++ +N + I+ GN RV+ ARL D ++ D Sbjct: 290 IEHQKYFPLCKKDGSLTNVFVITANQPKT---PQIIAGNIRVLTARLSDGRFLYQEDIR- 345 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 K +D+ RL+ML +F ++G+ ++V R+ + + +L Sbjct: 346 -------------------KGMDEMNERLEML--MFRKELGSVADKVKRLEKNSELLIKL 384 Query: 404 ID--ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + D + +AI K+DL + +V FPELQG +G +A N N AI E +P Sbjct: 385 LGYEKDKDNILKAIKYMKSDLVSNMVYNFPELQGIMGGYFAKAMNLNDDIALAINEQYRP 444 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 + +P+N +++ DK+D + + + + P+GS+DP ALRR LGII I++++K Sbjct: 445 LFAADEIPSNDTGKAIAILDKMDNIAAGFYVGDIPTGSQDPNALRRQALGIINILIKSKK 504 Query: 522 DIPLSQFIEDQ------------------NLILFFHDRLKLYLHDRDIRHDLIEAILRPE 563 + L + IED ++ FF R + D D D + +L Sbjct: 505 HVNLKKLIEDAINSMPKDARNNKSEDLIKDIFEFFKSRFEN---DIDFAKDSVAGVLSTG 561 Query: 564 NDNLLTIVDLIKHLNEFFSSAK--GEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLL 621 D++ I+ ++EF + L KRI ++ + N + L Sbjct: 562 IDDMYDAYLKIEAIDEFRKKNEALFSNLLTVFKRIKNMIKSAKDVN------LDEALLKE 615 Query: 622 EAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNR 681 EAEK LY + + + M+++ Y + LL S+ EP++ FF ++VNV+D ++++NR Sbjct: 616 EAEKSLYNTYKEKLNEVNKLMENREYEKTFSLLASLYEPLDKFFKDIMVNVEDEKIKNNR 675 Query: 682 LSLLQYIKNIILIVINVQKIV 702 ++LL + I +++ +V Sbjct: 676 IALLSSVDKIFKNMLDFSSLV 696 >gi|289547827|ref|YP_003472815.1| glycyl-tRNA synthetase subunit beta [Thermocrinis albus DSM 14484] gi|289181444|gb|ADC88688.1| glycyl-tRNA synthetase, beta subunit [Thermocrinis albus DSM 14484] Length = 654 Score = 594 bits (1531), Expect = e-167, Method: Composition-based stats. Identities = 217/713 (30%), Positives = 332/713 (46%), Gaps = 73/713 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 D L+EI +EE+PAR+ A E L LLK ++ Y TP RL YLK Sbjct: 2 DLLIEIGTEELPARVIPLAVEYLRERFSVLLKR-----DDLITYATPRRLAFYLKDFKNE 56 Query: 63 SPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKP 116 E+ E +GP + G KA+ FL + ++KD Y+AV R Sbjct: 57 GEEREELIVGPPLSVAYQDGKPTKALLAFLDRVKAREEDLIHLQKDRG---TYVAVRRIV 113 Query: 117 KRLIE-DVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 K ++L + VP+PKSMRW + S + RP++ I + ++I Sbjct: 114 KEESPLELLSKSFEEILLSVPFPKSMRWDS-----SGVRFSRPVRWICALW-----GDQI 163 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + L I T GHRF + I++ S + Y++ L +A V+ R IL+ Sbjct: 164 VPLTFGNIKADRKTKGHRFLSSGWIELGSAEEYLQKLTDAYVIPQFNERLGLILSMLKEE 223 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTR 295 A +G + L EE+ LVE+ V +GSF+ KYL LPE++I + +Q+ F R++ Sbjct: 224 AYRLGGVPEYPEGLQEEVANLVEFPFVVVGSFEDKYLELPEKVIITVLAHHQRFFCVRSQ 283 Query: 296 E-GVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESA 354 E L F+ VSN +G IV+G +VV ARLEDAL F+K D Sbjct: 284 EEDRLLPFFLAVSNNAPKNG--EIVEGYRKVVKARLEDALFFYKED-------------- 327 Query: 355 LKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDAD---VALV 411 L +PLDQ + +L VVFH + G+ ++ R+ L +KIA ++ + + Sbjct: 328 ------LKRPLDQLVEQLS--GVVFHPRAGSMWDKTIRVMELSQKIAGTLNLEEGIKEKI 379 Query: 412 DRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTN 471 RA LSKADL T +VRE ELQG +G YA Q E+ A+ E P + VP + Sbjct: 380 KRAAYLSKADLLTHMVREMDELQGYMGYVYAKAQGEDEEVARALYEQYLPARAHDPVPLS 439 Query: 472 KISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIED 531 +S +SLADKLDT+ E P+GS DPY L+RA G++ II +++D+ + +E Sbjct: 440 PVSYVLSLADKLDTIKTLLEAGEVPTGSSDPYGLKRAAFGVLAIIDAHQLDLHIDDLVEV 499 Query: 532 QNLI-LFFHDRLKLYLHDRDIRHDLIEAILRP-ENDNLLTIVDLIKHLNEFFSSAKGEKF 589 + F +RL+ YL D++ A+L L ++ L++ + + + Sbjct: 500 SPKLEEFLRNRLEAYLEPYG--QDVVRAVLSVHSPLRPLEVIKLVRSIANIREEERFKDV 557 Query: 590 LLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQ 649 + +R+ +IL +++ + L EAEKRLY + Sbjct: 558 VEVYRRVVRILPKGWLEDK-----VKETLLREEAEKRLYEKLLQLEE-----------SP 601 Query: 650 IGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKIV 702 L I ++ FFD VLV D +R NRL+LL ++ ++ N I Sbjct: 602 SLSDLWKIKPVVDEFFDSVLVMDKDEAIRTNRLALLMRVRKLMERFANFDLIT 654 >gi|303233269|ref|ZP_07319941.1| glycine--tRNA ligase, beta subunit [Atopobium vaginae PB189-T1-4] gi|302480659|gb|EFL43747.1| glycine--tRNA ligase, beta subunit [Atopobium vaginae PB189-T1-4] Length = 701 Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats. Identities = 199/707 (28%), Positives = 320/707 (45%), Gaps = 74/707 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPH 62 +F+LEI +EE+P+ A + L+ I+ LK G+ Y ++ + +P RL + + GL+ Sbjct: 10 EFVLEIGAEEMPSAPLICATKQLAQIMERELKACGLAYDSLEAHNSPRRLVVLVHGLAAA 69 Query: 63 SPEKIEERLGPRVGAG-------KKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EK + GP V KA GF R G T K+D + + Sbjct: 70 TQEKHTTKRGPAVSIAYDAQGNLTKAGLGFARKAG-ATPEQLSKKQDKDGKEYIWCDIFT 128 Query: 116 PKRLIEDVLKTIVPVAIQKVPWP--KSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 P D+L I+ I K+ WP +S RW T S++RP++ I +L + Sbjct: 129 PSLRAHDLLGDIITNCITKLEWPNYRSQRWGATTE-----SFVRPVRWICALL-----ND 178 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 +I ++ N T GHR AP V S Y+ L +A V+L+ + RR IL+D Sbjct: 179 DVIPCTFADVTSSNYTLGHRVLAPGKHVVSSASAYLDVLHDAHVMLE-DERRQRILDDVA 237 Query: 234 RLASAV-GLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT 292 A G+ + + +E++ L EW V +G FD ++L +P E+I ++ TNQ+ F Sbjct: 238 AYEKAHPGMHVDMPRGTFDEVVNLTEWPHVVIGEFDHQFLAIPHEIICESMLTNQRYFPI 297 Query: 293 RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKE 352 +G L F++VSN + + ++ GN RVV ARL DA F+ D Sbjct: 298 YDADGALTCFFVIVSNAKP-EMDTHVIDGNERVVRARLSDAQFFYTED------------ 344 Query: 353 SALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVD 412 L PL+ + L V F K+G+ ++ R+R L + IA+ + D AL + Sbjct: 345 --------LKAPLESYVPLLKR--VTFQEKLGSVFQKAVRMRDLAQTIAEACNFDAALTE 394 Query: 413 ---RAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 RA L+KADL T+ V EF QG +G +A E+ AI+EH PR ++V Sbjct: 395 HCARAAYLAKADLVTQTVVEFTSQQGVMGAYFAEACEEDPDVVAAIKEHYHPRFSGDSVA 454 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILE----------- 518 + VSLADKLDT+ +AIN+ P+GS DP+ALRR+ LG I I+ E Sbjct: 455 QSTCGKVVSLADKLDTICGMFAINQPPTGSSDPFALRRSALGCIAILKELPRISLLSLIS 514 Query: 519 ---NKIDIPLSQFIEDQNLIL---FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVD 572 + D+ + D + FF RL D I +++ AI + Sbjct: 515 SSLARYDMQGTSCDTDATIHEISQFFLGRLGSLAKDEHISPEVVMAISAISIIDPQEFFA 574 Query: 573 LIKHLNEF--FSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAV 630 L + + E ++ R I + + + L E++LY Sbjct: 575 RAHALEQVQQQQADVFEDLAIAYGRADHI------REAALGTTVDVDMLA-PTEQKLYNA 627 Query: 631 ISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREV 677 + ++++++ ++ Y L ++ PI+ FFD + V +D +V Sbjct: 628 CLEGQDNVEKALSNRDYVVAASALAALRLPIDEFFDDIRVMDEDTKV 674 >gi|88808503|ref|ZP_01124013.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 7805] gi|88787491|gb|EAR18648.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 7805] Length = 719 Score = 593 bits (1529), Expect = e-167, Method: Composition-based stats. Identities = 177/757 (23%), Positives = 304/757 (40%), Gaps = 96/757 (12%) Query: 1 MPD-FLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGL 59 M + FLLEI +EE+PA A L + L + + + + TP RL + +K L Sbjct: 1 MANTFLLEIGTEELPADFVPSALRQLEQRVRSDLNDLRLAHGELSVTGTPRRLLVVVKDL 60 Query: 60 SPHSPEKIEERLGPRVGA------GKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 P+ E+R GP V + A GF + G+ SD Q ++ P KG A + Sbjct: 61 IDSQPDLEEDRKGPPVSSAFVDGRPGPAAIGFAKRCGVDP-SDLQPRETP-KGPCLFAQV 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 + P + +L VP I + + MRW + RP++ ++ +L + Sbjct: 119 KTPGQASSALLGQYVPRWIDALQGRRFMRWGCGEQ-----RFSRPVRWLVVLL-----GD 168 Query: 174 KIIDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +I + L + G + GHR H P V+S + + L A V+++ E R I Sbjct: 169 ALIPVTLDAADPVVTSGRTSRGHRLHQPLK-DVKSAEELLAQLARAGVMVNREQRAETIR 227 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 + A G + + L +E++ LVE V G ++L LP E+I ++ +Q+ Sbjct: 228 TAIAQEAERCGGQANCPESLFQELVDLVETPSVLKGKIADRFLDLPPEVIVTVMQAHQRY 287 Query: 290 FVTRTREGV-----------LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWK 338 + L F+LVSN IV GN RV+ ARL DA F Sbjct: 288 VPLLHPQAGSDPLQLQSRNVLRPEFLLVSNGLEP-ASDTIVSGNQRVLGARLADAEFFLT 346 Query: 339 RDQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGK 398 D+ R ++ V F +GT +R R+ + Sbjct: 347 VDRRQSSEQR----------------------RANLAQVTFAEGLGTLLDRSERMSWVMD 384 Query: 399 KIAQLIDAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAI 455 ++ + + + RA K DL ++V EFPELQG +G +Y + + E A+ Sbjct: 385 QLLLALQLEGPIASHARRAAHFCKHDLVCQMVGEFPELQGLMGGKYLLEEGEVRDVALAV 444 Query: 456 EEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRI 515 EH +P G + PT+ ++LA++++ L++ +A ++P+GS DPYALRRA GI++I Sbjct: 445 AEHYQPAGAGDAPPTSDAGALLALAERIELLLSIFAKGQRPTGSSDPYALRRAGNGIVQI 504 Query: 516 ILENKIDIPLSQFIEDQNLILF--------------------FHDRLKLYLHDRDIRHDL 555 + +PL + R+ + DL Sbjct: 505 LWNRGWRLPLQSLFKTAATHWAERFPAFKVEASALANDLGQLLRQRMVSQFEEDGFEIDL 564 Query: 556 IEAILRPEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNRE 609 ++A+ ++ + D + LN +S + + +R ++ + Sbjct: 565 VQAVSGDGVSTDRLLEDPVDARDRLLLLNNLRTSGRLQGLQAVVQRASRLADKGDLPLSS 624 Query: 610 ISLE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD- 666 + +E + + +E L + + Y + L +E FFD Sbjct: 625 LCVEGVVDAELFDSPSEASLLVELEAMSP----LAVARDYEGLAQKLQGAARALEAFFDG 680 Query: 667 --QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+V DD +R NRL+LL ++N ++ I Sbjct: 681 AESVMVMADDPSIRRNRLNLLGVLRNQAFVLARFDNI 717 >gi|260436306|ref|ZP_05790276.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8109] gi|260414180|gb|EEX07476.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8109] Length = 721 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 180/724 (24%), Positives = 304/724 (41%), Gaps = 86/724 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA +A + L + L+E + + + + TP RL + + L Sbjct: 3 ATFLLEIGTEELPADFVRQALDQLQQRVSRDLREARLAHGAVSVFGTPRRLVVSVADLED 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ E+R GP V G A GF + G+ + Q +D KG A + Sbjct: 63 RQPDLQEDRKGPPVAQAFKDGIPGPAAIGFAKRCGVDPSALEQ--RDTPKGPCVFATVLT 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P + ++L+ ++P I + + MRW T + RP++ +L + +E + Sbjct: 121 PGQACVELLQGLIPQWIDALQGRRFMRWGTGAQ-----RFSRPIRWLLSLKGSEVIPV-V 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + E+ + HR H P+ + S + + L A V++D R I + Sbjct: 175 LGGADPEVRSDRFSRAHRLHGDEPLSIASAEQFGETLAAAGVVVDRAERAKRIRTSLDQS 234 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-- 293 A A + L EE++ LVE ++ G+ +++L LP E+I ++ +Q+ + Sbjct: 235 AQAANGTPDCPESLFEELVDLVEDPKILEGTIAERFLQLPPEVISTVMQAHQRYVPLKVP 294 Query: 294 ---------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 T E VL F+LV N A + IV+GN RV+ ARL DA F D+ Sbjct: 295 GLEADPLRLTAEAVLRPQFLLVGNGLAP-ASSLIVRGNERVLGARLADAEFFLDVDRR-- 351 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 + R LD V F +G+ +R RI L + + + Sbjct: 352 ------------------QSSASRREALDR--VTFAEGLGSLLDRSERIERLTGLLLKQL 391 Query: 405 DAD---VALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 D V +RA K DL +++V EFPELQG +G +Y + + E A+ EH P Sbjct: 392 GLDESVVDTAERAAHFCKNDLVSQMVGEFPELQGLMGGKYLLEEGEPRDVALAVVEHYLP 451 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG + +P V+LA++L+ L++ +A ++P+GS DPYALRRA G+++I+ Sbjct: 452 RGAGDALPATPAGAVVALAERLELLLSIFAKGQRPTGSSDPYALRRAGNGVVQILWGMAW 511 Query: 522 DIPLSQFIEDQ--------------------NLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + L F+ +L R+ L D DL++A+ Sbjct: 512 RLDLMAFLSIAVEEWAAQFPAFAVDASQLHYDLCQLMRQRIVSQLEDDGFAPDLVQAVAG 571 Query: 562 PEN------DNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEE--KKNREISLE 613 + L + I+ L + S + + +R ++ + + Sbjct: 572 DAVSSQRLLSDPLDVKQRIQLLRDLRDSGQLDAVQAVVQRAAKLAEKGDLARDQLVAGDV 631 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLV 670 + P +EK L+A + Q + Y + D L + ++ FFD V+V Sbjct: 632 VKPGRFESASEKDLFAALEQL----QPLAQQRSYQSLADALVAATPALQAFFDGDTSVMV 687 Query: 671 NVDD 674 VDD Sbjct: 688 MVDD 691 >gi|317014380|gb|ADU81816.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori Gambia94/24] Length = 701 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 197/723 (27%), Positives = 334/723 (46%), Gaps = 72/723 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFVKDFPLLTQETKEEFFGP 75 Query: 74 RVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V GF + GL+ Q K +Y A + K+ +D+ Sbjct: 76 PVKIACNNQDKTQGLNALGLGFYQKLGLKDHQHFQTAFKNNKEVLYHAKIHA-KQPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + IV ++ + + KSMRW S+IRP+ +I + E+ + I++ Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFND--IEVKGYGF 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 T HR I+V S Y LE+ V+LDP+ R IL + L + + Sbjct: 188 KTKQATKAHRQEGFDFIEVDSPKAYFEILEKNHVILDPKKREAKILQEIKGLEKKHDIIV 247 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-----V 298 D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F T +++ Sbjct: 248 EMDRDLLDEVVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQRYFATFSQKSQEESPT 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 308 LHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEND------------------ 348 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--------IDADVAL 410 L KPLD + VVF +GT +++ R ++ + + Q ++ + L Sbjct: 349 --LKKPLDNAP----LESVVFVQGLGTLKDKMERESIIAQYLTQKYISSLNMPLEKALEL 402 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P +P+ Sbjct: 403 VKRAVQIAKADLLSEVVYEFSELQGIMGYYYALEQNENELVALSVKEQYLPASENAPLPS 462 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ--- 527 N S V+L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II ++ L Sbjct: 463 NVFSAIVALSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLK 522 Query: 528 --FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F + F + L+ +L +R D +I ++L +++TI+ +K L F Sbjct: 523 NLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIVTIIQKVKALKRF 582 Query: 581 FSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + ++ I + +N E S + E L+ + T Sbjct: 583 LDDPKNAQKKELLFSAFKRLANINKDRNPNEKSEFSTRLFKEPKEHALFEAFNAIKTSAF 642 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ES+D K + S+ P+E +F VLV D E++ NR + L + L + +++ Sbjct: 643 ESLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWDVYQSFLEIGDIK 697 Query: 700 KIV 702 +I Sbjct: 698 EIA 700 >gi|317011207|gb|ADU84954.1| glycyl-tRNA synthetase subunit beta [Helicobacter pylori SouthAfrica7] Length = 709 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 197/742 (26%), Positives = 340/742 (45%), Gaps = 80/742 (10%) Query: 3 DFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVI--------YQNMRQYWTPHRLFL 54 + L+E+ +EE+PA+ +++ L L ++ + +N+ ++TP RL + Sbjct: 5 ELLVEVLTEELPAQALLNEYKEMPKKLHALFQKHALEVRNETQNEARNIEVFYTPRRLCV 64 Query: 55 YLKGLSPHSPEKIEERLGPRVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPK 104 +K + E EE GP + GF + GL+ Q Sbjct: 65 LVKDFPLFTKETKEEFFGPPIEIACNNKDKAQGLNALGLGFYQKLGLKDYKHFQSAFKNN 124 Query: 105 KGDVYLAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILC 164 K +Y A + PK+ ++++ IV ++ + + KSMRW + S+IRP+ +I Sbjct: 125 KEVLYHAKIN-PKQPTKNLIMPIVLEFLESLNFGKSMRWGSVEK-----SFIRPIHNICV 178 Query: 165 ILVAEDAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECR 224 + E+ I++ T HR I V S Y LE+ V+LDP+ R Sbjct: 179 LFNGENFNN--IEIKEYGFKTKQATKTHRQEGFDFIGVNSPREYFEVLEKNHVILDPKKR 236 Query: 225 RNAILNDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIK 284 IL + L + + + D+DLL+E+I + E+ +G FDK +L LP E+I ++K Sbjct: 237 EEKILQEIKELETKHHIIVEVDRDLLDEVIAITEYPSALLGEFDKAFLKLPSEIITTSMK 296 Query: 285 TNQKCFVTRTREG-----VLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKR 339 NQ+ F T +EG L N FI+VSN D I+ GN +V+ ARL DA+ F++ Sbjct: 297 ENQRYFATFNQEGQKEGQKLHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEN 355 Query: 340 DQNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKK 399 D L KPLD + VVF +GT +++ R ++ + Sbjct: 356 D--------------------LKKPLDNAP----LESVVFVQGLGTLRDKMERESIIAQY 391 Query: 400 IAQL--------IDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISC 451 + Q ++ + L++RAI ++KADL +E+V EF ELQG +G YA+ QNEN Sbjct: 392 LTQKYALSLNMPLEKALELMNRAIKIAKADLLSEVVYEFTELQGIMGYYYALKQNENEWV 451 Query: 452 CDAIEEHLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLG 511 +++E P +P++ S V+L+ KLD+L + ++ + PSGSKDP+ALRR + G Sbjct: 452 ALSLKEQYLPASENAPLPSSVFSAIVALSLKLDSLFSLFSTGKIPSGSKDPFALRRLSFG 511 Query: 512 IIRIILENKIDIPL-----SQFIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILR 561 +++I+ + L + F + F + L+ +L +R D +I ++L Sbjct: 512 LLKIVAHYGLKFDLKVDLKNLFEKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLN 571 Query: 562 PENDNLLTIVDLIKHLNEFFSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLL 620 +++ I+ +K L F K + ++ I + +N + S Sbjct: 572 TNERDIVAIIQKVKALKRFLDDPKNAQKKELLFSAFKRLANINKDRNPNQTSGFSANLFK 631 Query: 621 LEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDN 680 E L+ + T ES+D K + + P+E +F VLV D E++ N Sbjct: 632 EPQEHALFKAFNALKTSAFESLDSK-----IEAYFGLHVPLEEYFKSVLVMDKDLEIQKN 686 Query: 681 RLSLLQYIKNIILIVINVQKIV 702 R + L + L + ++++I Sbjct: 687 RKNFLWNVYQSFLEIGDIKEIA 708 >gi|254455912|ref|ZP_05069341.1| glycyl-tRNA synthetase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207082914|gb|EDZ60340.1| glycyl-tRNA synthetase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 688 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 204/721 (28%), Positives = 346/721 (47%), Gaps = 56/721 (7%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M +F LE++SEEIP+ +Q EDL + + ++ + TP+RL + +GL Sbjct: 1 MSEFFLELFSEEIPSSLQKNLREDLLGNFNKFFNDRLISFKKGSSFSTPNRLIILFEGLQ 60 Query: 61 PHSPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 K EE GP + A + A++GF+RS + KK + Y + + Sbjct: 61 KQVVLKSEEIKGPNINAPEIALEGFIRSNNISKND--LYKKTIDNKEFYFFKTKLKRLNT 118 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++L+ +P ++K+ W KSM+W + W RPLKSIL + + D Sbjct: 119 YELLEEFIPKTLEKIQWKKSMKWGNYN-----LKWGRPLKSILAVFDKKKLI-----FDF 168 Query: 181 KEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVG 240 + N T+ + + + Y ++ ++++ E R+N I + + + Sbjct: 169 HHLSSSNTTFIDKEFEENKKIFTNFKDYNNFFKKLNIIINQELRKNLIEKKFNEILTKKN 228 Query: 241 LELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREGVLA 300 +++ ++ LL+E++ L + V + FD+K+L +P+E++ +T++ +QK F T +G + Sbjct: 229 IKIEKNTRLLDEVVDLTDQPNVLLCEFDRKFLNIPKEILIITMQNHQKYFPTFDNKGNIT 288 Query: 301 NCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFNLD 360 N F++V+N Q D I GN RVV ARL DA FW +D+++ Sbjct: 289 NEFLVVTNKQ--DKKGFIKLGNERVVEARLSDAEFFWFKDKSHN---------------- 330 Query: 361 LSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDADVALVDRAIVLSKA 420 L +++++L ++ + +GT ++V R+R LG ++ + V+ + + K Sbjct: 331 ----LVKKVSKLKSMN--YFKGLGTYFDKVQRMRKLGGMLSDELLISKEKVELSASVCKV 384 Query: 421 DLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITVSLA 480 DL +E+V EFPELQG +G +A Q AI E P G +P SI +SLA Sbjct: 385 DLVSELVGEFPELQGIMGGYFAEAQGFEKDVSLAISEQYLPIGSDSKIPKKPYSIALSLA 444 Query: 481 DKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFIEDQNLI----- 535 DK+DTL+ F+ IN+KP+ SKDPYALRR LGIIRII +NK D + I + + Sbjct: 445 DKIDTLVGFFGINQKPTSSKDPYALRRLALGIIRIIAQNKKDFKIRDLISYSSSLYVDQG 504 Query: 536 -------------LFFHDRLKLYLHDRDIRHDLIEA-ILRPENDNLLTIVDLIKHLNEFF 581 F +RLK ++ + IRHD+I+A + D+++ I K LN+ Sbjct: 505 FEFQNKFLQKDLSEFLMERLKFFMKEEKIRHDIIQASVNSFNLDHIVVIFGKAKCLNKII 564 Query: 582 SSAKGEKFLLSAKRIFQILAIEEKKNR-EISLEISPQYLLLEAEKRLYAVISDFGTHIQE 640 G + S KR I+ E K + E+S P + EK L+ I++ + Sbjct: 565 RKPNGIDLISSYKRASNIIESEIKNQKIELSNSTDPGIFKTDFEKNLFKKINELSKYFNS 624 Query: 641 SMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQK 700 + + + L + + FFD V+VN +D ++ NRL L+Q + +N Sbjct: 625 INKDENFEKSLTYLADSKKVVFDFFDNVIVNEEDTTIKKNRLELIQMLCKTFDNYVNFSL 684 Query: 701 I 701 I Sbjct: 685 I 685 >gi|307637660|gb|ADN80110.1| Glycyl-tRNA synthetase beta chain [Helicobacter pylori 908] gi|325996260|gb|ADZ51665.1| Glycyl-tRNA synthetase beta chain [Helicobacter pylori 2018] Length = 701 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 194/723 (26%), Positives = 331/723 (45%), Gaps = 72/723 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFIKDFPLLTQETKEEFFGP 75 Query: 74 RVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V GF + GL+ Q K +Y A + K+ +D+ Sbjct: 76 PVKIACNHQDKTQGLNALGLGFYQKLGLKDHQCFQTAFKNNKEVLYHAKIHA-KQPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + IV ++ + + KSMRW S+IRP+ +I + E+ + I++ Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFND--IEVKEYGF 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 T HR I+V S Y LE+ V+LDP+ R IL + L + + + Sbjct: 188 KTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEIKELETKHHIIV 247 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-----V 298 D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F ++ Sbjct: 248 EMDRDLLDEVVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQRYFAIFNQKSQEESPT 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 308 LHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEND------------------ 348 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--------IDADVAL 410 L KPLD + VVF +GT +++ R ++ + + Q ++ + L Sbjct: 349 --LKKPLDNAP----LESVVFVQGLGTLKDKMERESIIAQYLTQKYASSLNMPLEKALEL 402 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P +P+ Sbjct: 403 VKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPLPS 462 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ--- 527 + S V+L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II ++ L Sbjct: 463 SVFSAIVALSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLK 522 Query: 528 --FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F + F + L+ +L +R D +I ++L +++TI+ +K L F Sbjct: 523 NLFQKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIVTIIQKVKALKRF 582 Query: 581 FSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + ++ I + +N E E L+ + T Sbjct: 583 LDDPKNAQKKELLFSAFKRLANINKDRNPNEKSEFFTHLFKEPKEHALFEAFNAIKTSAF 642 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ES+D K + S+ P+E +F VLV D E++ NR + L + L + +++ Sbjct: 643 ESLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWDVYQSFLEIGDIK 697 Query: 700 KIV 702 +I Sbjct: 698 EIA 700 >gi|87124315|ref|ZP_01080164.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9917] gi|86167887|gb|EAQ69145.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9917] Length = 719 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 189/751 (25%), Positives = 319/751 (42%), Gaps = 87/751 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA A L + G LKE + + ++ TP RL + ++ L Sbjct: 3 STFLLEIGTEELPADFARLALPQLKATVTGDLKEWRLNHGAIQVTSTPRRLAVIVENLVE 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + E+R GP V G A GF R G+ S +++ P KGD A + Sbjct: 63 RQEDLREDRKGPPVAQAYVDGQPGPAALGFARRCGVDP-SALEVRATP-KGDCVFATVLV 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L+ +P + + + MRW + + RP++ ++ + E Sbjct: 121 EGQSTLSLLQERIPGWVDALQGRRFMRWGSGDQ-----RFSRPVRWLVALFG-EVCVPVT 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + HR + + + Y L A V++D R I Sbjct: 175 LAASDPVVHSGRSSRAHRLF-DRTVDLADAEAYGAALAAAGVVVDRNKRAEIIRTALKER 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR-- 293 A + L EE++ LVE +V GS +YL LP E+I ++++Q+ R Sbjct: 234 AEVLQGVADCPPALFEELVDLVEAPRVLTGSIADRYLALPPEVIITVMQSHQRYVPLRRP 293 Query: 294 ---------TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 + VL F+LVSN AS I +GN RV++ARL DA F D+ Sbjct: 294 GVCMDPLGLSAREVLCPDFLLVSNGLAS-ADDRIREGNQRVLSARLADAEFFLSVDRRQP 352 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI 404 + R + V F +G+ +R RI L ++ + + Sbjct: 353 SSAR----------------------REALQAVTFAEGLGSLRDRSDRIEHLAGQLLERL 390 Query: 405 D---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 + A RA L K DL +++V EFPELQG IG +Y + + E+ + A+ EH +P Sbjct: 391 ECPQATQEAARRAAHLCKHDLVSQMVGEFPELQGLIGGKYLLEEGESRAVALAVVEHYQP 450 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG + +P++ V+LA++L+ L++ +A E+PSGS DPYALRRA GI++I+ E Sbjct: 451 RGAGDALPSSDAGAVVALAERLELLLSIFAKGERPSGSSDPYALRRAGNGILQILWERGW 510 Query: 522 DIPLSQF------IEDQNLILFFHD--------------RLKLYLHDRDIRHDLIEAILR 561 + L + + L F D R+ L D DL++A+ Sbjct: 511 RLDLLELLKGAAGRWQELLPAFAVDTDVLVRDLVLLLRQRIHSQLEDDGHAPDLVQAVAG 570 Query: 562 PEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNR--EISLE 613 + + ++D I+ L++ + +R ++ + + + Sbjct: 571 DAVSDERLLCDPIDVLDRIRLLSQLRQQNRLVAVQAVVQRAARLAEKGDLARGVLDAADT 630 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVLV 670 + P+ +E+ +Y V+ Q + Y + L +E FFD V+V Sbjct: 631 VDPKRFASPSEQAMYGVVQRLKPLAQ----ARNYQALAHALVEATPTLEAFFDGDQSVMV 686 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD E+R NRL+LL ++N ++ ++I Sbjct: 687 MADDPELRRNRLNLLSVLRNQAGVLAQFERI 717 >gi|313888907|ref|ZP_07822567.1| glycine--tRNA ligase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845080|gb|EFR32481.1| glycine--tRNA ligase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 576 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 198/615 (32%), Positives = 319/615 (51%), Gaps = 63/615 (10%) Query: 110 LAVLRKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAE 169 A + R +++K I+P I+ + +PK+MRW + + RP++ ++ +L Sbjct: 2 FAHISSIGRDSAEIIKEIIPGLIKDINFPKNMRWGGKN-----IRFARPIRWVVSLL--- 53 Query: 170 DAKEKIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAIL 229 +K+++ D + I NIT GHRF IK+ +++Y + LE+ V+LD RR I Sbjct: 54 --NDKVVEFDFEGIQVSNITKGHRFLGSSEIKIDKVENYEKLLEDNYVILDQNKRREIIK 111 Query: 230 NDAHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKC 289 ++ ++A ++G E+ E++DLLEE+ +VE+ GS +KYL LP+E++ T+ + + Sbjct: 112 YESTKIAKSLGGEIHENEDLLEELTYIVEYPTPIKGSIKEKYLSLPKEVVTTTMIDHLRF 171 Query: 290 FVTRTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSS 349 +++G L FI V N D ++ GN +V+ ARLEDA F+ D Sbjct: 172 TPIYSQDGGLLPYFITVRNG-TRDYEDIVIAGNEKVLGARLEDAKFFYDDDI-------- 222 Query: 350 LKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLI---DA 406 SKPL + L+ V+FH K+GT E+ R V+ KIA+ + D Sbjct: 223 ------------SKPLVDYVENLN--GVLFHDKLGTMLEKEKRDGVVANKIAESLSFADE 268 Query: 407 DVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLE 466 + + R LSKADL T++V EF ELQG IG+ YA+ E AI E P+ + Sbjct: 269 AIDAIKRVAHLSKADLTTKMVIEFTELQGVIGEIYALKSGEKEIVATAIREQYLPKFAGD 328 Query: 467 NVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLS 526 +P + + SLADK+DT+ +AI E P+GS DP+ALRR+ +G+I II N L Sbjct: 329 KLPESSVGSIFSLADKIDTIAGLFAIGEIPTGSTDPFALRRSAIGVINIIRNNSWKFNLD 388 Query: 527 QFIE-------------------DQNLILFFHDRLKLYLHDRDIRHDLIEAILRPENDNL 567 + +E N+ FF R+K L D IR+D+I+++L PE++ + Sbjct: 389 EAVEASLYEYINDLGLTFNHEEVIANVRDFFLGRIKTMLQDEGIRYDIIDSVLIPESE-I 447 Query: 568 LTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRL 627 I D K LNE+F KF+ + RI + + LE+ L+ EAEK L Sbjct: 448 HNIFDKAKELNEWFK-EDRSKFVDAYNRINNLTKNVDL------LEVKEDLLVEEAEKDL 500 Query: 628 YAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQY 687 Y + +E++ ++Y + DLL+ + I+ FFD V+V +D +VR+NRL L+ Sbjct: 501 YMKYLEIDGSFKEALAEEKYMEAMDLLNDLVPSIDKFFDNVMVMAEDDKVRENRLGLINR 560 Query: 688 IKNIILIVINVQKIV 702 I+ I ++ ++ IV Sbjct: 561 IEENIQKILKIENIV 575 >gi|159903545|ref|YP_001550889.1| glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9211] gi|159888721|gb|ABX08935.1| Glycyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9211] Length = 720 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 186/752 (24%), Positives = 321/752 (42%), Gaps = 84/752 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M FLLEI +EE+P A L I++ L ++ + + + TP R+ L + L Sbjct: 1 MSTFLLEIGTEEMPPEFARLAPSQLHEIVVNDLAQKRLSHGRVICTSTPRRISLIISDLL 60 Query: 61 PHSPEKIEERLGPR------VGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + E+R GP G +A GF + + D ++++ KG A + Sbjct: 61 DRAEDFSEDRKGPPSTQAFINGVPSQAAIGFAKKYQI-LPEDLEVRETS-KGAFVYAKIL 118 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + +L +VP + +V + MRW + + + RP++ I+C+L +E Sbjct: 119 EKGLPASQLLVDLVPSWVNRVQGNRFMRWGSGET-----RFSRPIRWIVCLLDSEKLPIT 173 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHR 234 +I D I NI+ HR P+ + S + Y+ L VL+ E R+ I + Sbjct: 174 LIGTDPL-IISDNISRPHRLF-DQPVTISSPNKYLELLRSVGVLVVREERQKLINSLIQN 231 Query: 235 LASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRT 294 ++ + DLL E+ +VE+ + SF + +L LP E++ +K +Q+ Sbjct: 232 ASNELKANPDLSLDLLNELTDIVEFPSLVKCSFSESFLRLPPEVLTTVMKVHQRYIPLYL 291 Query: 295 R-----------EGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNN 343 + E +L F+ +SN ++ G I QGN RV+ AR DA F Sbjct: 292 KNIEIDPLALVSEKILHPSFLCISNGLSA-GENTIRQGNERVLKARFADARFFID----- 345 Query: 344 LPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL 403 LDLS P QR +L V F + +G+ +RV RI L K++ + Sbjct: 346 ---------------LDLSIPSIQRNDQLKR--VTFASGLGSLYDRVERIVWLSNKLSTI 388 Query: 404 ID---ADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLK 460 ++ +D + RA L K DL +++V EFPELQG IG +Y + + E ++ EH Sbjct: 389 LNISKSDSLHLTRAAQLCKHDLVSQMVGEFPELQGLIGGKYLLSEGEPRDVALSVLEHYM 448 Query: 461 PRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENK 520 PR +++P + I +++ DKL+ L++ +A E+P+GS DPYALRR+ G+++I+ Sbjct: 449 PRSSNDDLPQSHIGSLLAILDKLELLVSIFAKGERPTGSSDPYALRRSANGVLQILWNKS 508 Query: 521 IDIPLSQFIEDQ--------------------NLILFFHDRLKLYLHDRDIRHDLIEAIL 560 I + + Q + L FF R+ L + + D+++AI Sbjct: 509 ISLDVYQMLNLSVSYWRELFPNFNFNSHQLLNELTSFFRLRIISLLEESGVDSDIVQAIA 568 Query: 561 RPEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNREISL 612 + I+ K L S+ R ++ S Sbjct: 569 GESISIERLLRDPNDILVRAKVLTNLRSTGDLSGVQFVVTRAKRLADKGTLPLDILSASD 628 Query: 613 EISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD---QVL 669 + +E + V++ RY Q+ L + + FFD VL Sbjct: 629 VVDTSLFEKNSESEMLDVVNKLEP-FAICTSSTRYEQLATGLKDGKQSLSNFFDGEQSVL 687 Query: 670 VNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V ++ +R+NRL+LL ++N + + I Sbjct: 688 VMTENIPLRNNRLNLLSILRNQANELADFDLI 719 >gi|297624434|ref|YP_003705868.1| glycyl-tRNA synthetase subunit beta [Truepera radiovictrix DSM 17093] gi|297165614|gb|ADI15325.1| glycyl-tRNA synthetase, beta subunit [Truepera radiovictrix DSM 17093] Length = 710 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 198/742 (26%), Positives = 333/742 (44%), Gaps = 88/742 (11%) Query: 1 MPDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLS 60 M L EI +EE+P+ + E L ++ L+ G+ Y+ ++ + TP RL + + GL+ Sbjct: 1 MATLLFEIGTEELPSWYVTQGREALELLTRERLEAAGLAYEGLKGFATPRRLAVQVAGLA 60 Query: 61 PHSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVL 113 SP + + GP GA KA GF R+ G+ ++ +KG Sbjct: 61 DTSPVRELLQRGPAASAAFDASGAPTKAAVGFARANGVDPSE--LFVQETEKGAYVFFRK 118 Query: 114 RKPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKE 173 R D+L ++ ++ +P P+ MRW +P ++RP+ ++ +L + Sbjct: 119 RVGGEAARDLLPPLLAALVRDLPAPRKMRWGEVETP-----FLRPVAWLVALL-----DD 168 Query: 174 KIIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAH 233 ++ + + G T GHRF P+ ++ + Y LE A V+ DPE RR A L A Sbjct: 169 AVLPVTAAGVTAGRTTRGHRFLREAPVALEHAEAYEGALERAAVIADPEKRRAATLRAAC 228 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTR 293 A GLELV D +LL+E+ L+E +GSFD++YL LP+E++ T+ +Q+ F TR Sbjct: 229 EAAQQGGLELVCDPELLDEVANLIEIPVAILGSFDERYLSLPDEVLATTMIHHQRFFPTR 288 Query: 294 TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKES 353 G LA F+ VSN D A + +G + RL DA FW+ D++ + + Sbjct: 289 RPGGSLAPSFVGVSNNDVPD-KAVVRRGYEGALNPRLFDASFFWEADRSRSLSQHAW--- 344 Query: 354 ALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID---ADVAL 410 + + FH +GT ++V+R V +A+L+ + A Sbjct: 345 -------------------GLSGIGFHKGLGTVADKVARTHVAATALAKLVGLEEPERAA 385 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEH-LKPRGPLENVP 469 ++ A+ + KADL T++V E PEL+G IG+ YA+ + A+ EH ++P +P Sbjct: 386 LEGALPVFKADLSTQMVGELPELEGVIGRAYALAEGYPPEVA-AVLEHGVRPVKAGGPLP 444 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 +++ ++LAD+LD L+ F+A+ ++PSGS DP+ LRR L + RI+ +PL +F+ Sbjct: 445 SSRAGAVLALADRLDKLLGFFALKQRPSGSADPFGLRRDALAVARILNAQGWRVPLGEFV 504 Query: 530 EDQNLIL------------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIV 571 L F DR+ L +R L A++ ++T Sbjct: 505 RTAAAGLAEAKKPPLTDEVIAEVEAFIWDRVTGLLEAEGVRPALARAVIADGP-PVITAA 563 Query: 572 DLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVI 631 L + + + L KR + K +I+P+ E LY I Sbjct: 564 RRAHLLRALSADPEFAQLLQLYKRAANL-----AKQGAEDADINPKRFSSPYEAPLYDAI 618 Query: 632 SDFGTHIQESMDHKRYHQI-----------------GDLLHSICEPIEIFFDQVLVNVDD 674 + E + R + ++ +P++ F D VLV V+D Sbjct: 619 PPAKAALGELLAAVRSRLAPWDLGEGPAQGVGPLTGLAAVLALKKPLDAFLDNVLVMVED 678 Query: 675 REVRDNRLSLLQYIKNIILIVI 696 VR NRL+LL + + + Sbjct: 679 EAVRRNRLALLGEVSASLRELG 700 >gi|25009294|sp|Q8KA07|SYGB_BUCAP RecName: Full=Glycyl-tRNA synthetase beta subunit; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS gi|21623027|gb|AAM67695.1| glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 691 Score = 591 bits (1525), Expect = e-166, Method: Composition-based stats. Identities = 203/728 (27%), Positives = 342/728 (46%), Gaps = 69/728 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P+ + K + L ++Y+N+ + TP RL L + L Sbjct: 4 KTFLVEIGTEELPSNILKKIILVFYKNFVDELSFNKILYKNINYFSTPRRLALQIIELDT 63 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP + G KA + +S + ++K K G+ + ++ Sbjct: 64 SEKINEKIKKGPAIKHAFDENGNPTKAAYYWAKSCKINLNQAERLKT--KTGEWIIHRIQ 121 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K IE + I+ ++++ +MRW + +IRP+++I+ +L EK Sbjct: 122 EKKEKIELLFPKIIEKILKQINLKNTMRW-----ETTNLRFIRPIRNIVMLL-----DEK 171 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 II ++ +P N Y H I +++ Y L ++ ++ + E R+ I +A Sbjct: 172 IIKSEVFNVPSNNFLYHHISCKEEKIYIKNAIEYPAVLFKKNKIIANYETRKEKIKYEAK 231 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLC-LPEELIRLTIKTNQKCFVT 292 ++A V + + LLEE+ LVE Q + F K Y+ +P++++ TI+ Q+CF Sbjct: 232 KIAKKVDGIIKTNPFLLEEVTSLVESPQALLARFKKDYINYIPKKILIHTIEKQQRCFSI 291 Query: 293 R--TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + FI +SNI++ I+ GN +V+ ARL DA+ F K+D+ Sbjct: 292 YSNNSKKEILPYFIFISNIKSKKNKE-IILGNEKVMHARLSDAMFFLKQDRK-------- 342 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVA 409 + L+ + L V F+ +GT E+ R+++L + I+ + + Sbjct: 343 ------------RKLENYLPFLK--KVSFYNNLGTLYEKTLRLKLLIESISCYTNTINKN 388 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R+ VLSK DL T++V EFPELQG IG YA+ EN AI+E P + +P Sbjct: 389 DLIRSAVLSKCDLITQMVDEFPELQGTIGMYYALENKENKEVAIAIKEQYLPSFSGDELP 448 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +S++DK+DTL +AI E P+ KDP+ LRRA LGI+RII+ KI I L + I Sbjct: 449 STPIGCLLSISDKIDTLSGMFAIGETPTPEKDPFGLRRAALGILRIIITKKIPIDLKKII 508 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 E I FF RL + + +I+++L + L I Sbjct: 509 EISLKIYTFKKVNYSIISKKIIKFFISRLSFFYEKKGYSTKVIKSVLSCKLTEPLDIDKR 568 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I +++ E +L AKRI I+ + IS EI + + EK L I Sbjct: 569 INAISDLKK---IESIILIAKRIDNIVKNNHQI---ISSEIHVELMKKTEEKNLLKEIKI 622 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 F + +E K+Y +I + + +PI+ FFD+V +N + E+R NRL LL I+ L Sbjct: 623 FNSKTKELFIQKKYKEILVEIKKLEKPIDNFFDKVQINHSNFEIRQNRLLLLIKIQKFFL 682 Query: 694 IVINVQKI 701 + N + Sbjct: 683 KIANFSYL 690 >gi|58584628|ref|YP_198201.1| glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418944|gb|AAW70959.1| Glycyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 702 Score = 591 bits (1525), Expect = e-166, Method: Composition-based stats. Identities = 221/727 (30%), Positives = 350/727 (48%), Gaps = 72/727 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 L E SEEIP+RMQ+ AA + + + V + ++ + T R+ L++ +S Sbjct: 3 SQLLFECLSEEIPSRMQNSAAAQVKNYITNAFNKNNVKFASIEVFITARRITLFVDNISI 62 Query: 62 H-SPEKIEERLGPRVGAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLI 120 +E GP V A K AI+GFLR + + + D Y I Sbjct: 63 SGLKGSNDEIKGPNVNASKSAIEGFLRKN--KKSETDLLVRKVNNVDFYYLKKDVYSFNI 120 Query: 121 EDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDL 180 ++ LK+ + ++ WPKSMRWS W+RP+K+ILC L +II + Sbjct: 121 KEFLKSQLEEMLKNFSWPKSMRWSERKE-----RWVRPIKNILCTL-----NNEIIPISF 170 Query: 181 KEIPCGNITYGHRFHAPH-PIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAV 239 I NITYGHRF + + V++ Y LE+ V+L P R+ IL+ ++ Sbjct: 171 AGITVCNITYGHRFLSSGTALTVKTPKDYFELLEKNNVILQPGKRKQFILDQINKFTKEQ 230 Query: 240 GLELVEDKDLLEEIIGLVEWVQVFMGSFD-KKYLCLPEELIRLTIKTNQKCFVTRTREGV 298 L+L ++ LL E+ GL+EW V G + +K L LP+E+I I T QK G Sbjct: 231 NLQLEKNDYLLNELTGLIEWPIVLFGEVNQEKLLGLPKEVILSIINTQQKYLAL--SNGQ 288 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 + FI + +V+G++R++ ARL DA +D+ Sbjct: 289 KISHFIT----VVNVNNDEVVKGHARILEARLADAQFLISQDKKEN-------------- 330 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLID-ADVALVDRAIVL 417 LD + +LD ++FHA +G+ GE+V RI L K IA + + + RA L Sbjct: 331 ------LDYYVKKLD--SILFHASLGSVGEKVKRIITLSKYIAIYVPRVSLIKIGRAAYL 382 Query: 418 SKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPTNKISITV 477 +KADL T IV+EFPELQG +G YA E+ +AI EH KP GP + P + +I + Sbjct: 383 AKADLATLIVKEFPELQGIMGGYYASYFQEDREIVEAITEHYKPIGPEQECPKSSAAIVM 442 Query: 478 SLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPL------------ 525 S+ADK+D+L+ A EK SGS D + LRR +GIIR+ILEN + IP+ Sbjct: 443 SIADKIDSLVGLIAAGEKISGSYDQFGLRRMAIGIIRMILENNLHIPIRLLIDKSVSLYP 502 Query: 526 --------------SQFIEDQNLILFFHDRLKLYLHDRDIRHDLIEAIL-RPENDNLLTI 570 + + ++ F +R ++ L +RDIR D++++IL + + ++LLT Sbjct: 503 KLVFTKDVTSVDHPHKLSRAELVLKFCLERFRVILKNRDIRQDIVDSILCKDDINDLLTA 562 Query: 571 VDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEK-KNREISLEISPQYLLLEAEKRLYA 629 L+ + ++ +G++ L + KR+ I+ EK N S + ++L+ E L Sbjct: 563 ERQTVILDRYLNTPEGKQILSTYKRVSNIVNKAEKNDNTAYSAPYNKKFLIESEEMVLSD 622 Query: 630 VISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIK 689 +I+++M ++ D L I F + V +N D ++R NRLSLL + Sbjct: 623 YAITACRNIKQAMQSGNFNAALDELIRFTPFINQFMNSVKINCDSDKLRRNRLSLLANVA 682 Query: 690 NIILIVI 696 + +V Sbjct: 683 STFHLVA 689 >gi|116074692|ref|ZP_01471953.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9916] gi|116067914|gb|EAU73667.1| putative Glycyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9916] Length = 719 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 193/751 (25%), Positives = 316/751 (42%), Gaps = 87/751 (11%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA A L + L + + + ++R TP RL + +K L+ Sbjct: 3 STFLLEIGTEELPADFARLALPQLQERVQRDLADLRLAHGDVRVSSTPRRLAVQVKALAE 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 + EER GP V G A GF + G+ + +++ P KGD A ++ Sbjct: 63 GQEDLCEERKGPPVAQAFKDGQPGPAAIGFAKRCGVDP-AALEVRSTP-KGDCVFATVQV 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 + +L+ +P I + + MRW + RP++ ++ +L E Sbjct: 121 KGQPALSLLQDCIPAWIDALQGRRFMRWGNGDQ-----RFSRPVRWLVALLGTEIVPVT- 174 Query: 176 IDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRL 235 + + G + GHR P ++V S D Y L V D + R I + Sbjct: 175 LPASEPVVHSGRCSRGHR-LHPGGVEVASADDYDTALAAVGVHADRQQRAALIQSSLQER 233 Query: 236 ASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVT--- 292 AS+ L L EE++ LVE ++ G +YL LP E+I ++++Q+ Sbjct: 234 ASSFDGALDCPSGLFEELVDLVEDPRIIQGEIADRYLDLPPEVIVTVMQSHQRYVPLTRS 293 Query: 293 --------RTREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNL 344 VL F+LV N AS A I +GN RV++ARL DA F Sbjct: 294 GVQPDPLRLASRDVLRPEFLLVGNGLAS-ADAQIRRGNERVLSARLADAEFF-------- 344 Query: 345 PNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIA--- 401 N+D +P R L V F + +G+ +R RI +L + Sbjct: 345 ------------LNVDRKQPSADRREALSR--VTFASGLGSLLDRTERIELLAASLVTAL 390 Query: 402 QLIDADVALVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKP 461 QL A RA K DL +++V EFPELQG +G +Y + + E A+ EH P Sbjct: 391 QLPAATADAAKRAAHFCKNDLVSQMVGEFPELQGLMGGKYLLEEGETREVAQAVVEHYYP 450 Query: 462 RGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKI 521 RG +++P + V+LA++L+ L++ +A E+P+GS DPYALRRA GI++I+ + Sbjct: 451 RGAGDHLPQSDAGAVVALAERLELLLSIYAKGERPTGSSDPYALRRAGNGILQILWDRGW 510 Query: 522 DIPLSQFIED--------------------QNLILFFHDRLKLYLHDRDIRHDLIEAILR 561 + L + +L+L R++ L D DL++A+ Sbjct: 511 RLDLFALLRQFAEVWQQQFPDFKVEAHSLAADLVLLLRQRIQSQLEDDGYEADLVQAVAG 570 Query: 562 PEND------NLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIE--EKKNREISLE 613 + L ++D I+ L + +R ++ E + Sbjct: 571 ETLSDQRLLADPLDVLDRIRLLGSLREGQRLGALQAVVQRAARLAEKGDLEATVLQADAV 630 Query: 614 ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFF---DQVLV 670 + P +E ++A + + + Y Q+ D L +E FF D V+V Sbjct: 631 VDPGKFASPSETAMHAAVLQL----EPLAAARSYQQLADALVEATPALEAFFDGPDSVMV 686 Query: 671 NVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 DD ++R NRL+LL ++N ++ I Sbjct: 687 MADDLDLRRNRLNLLGVLRNQASVLARFDLI 717 >gi|325997849|gb|ADZ50057.1| Glycyl-tRNA synthetase beta chain [Helicobacter pylori 2017] Length = 701 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 194/723 (26%), Positives = 331/723 (45%), Gaps = 72/723 (9%) Query: 14 PARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSPHSPEKIEERLGP 73 PA+ +++ L L ++ + N+ ++TP RL L++K + E EE GP Sbjct: 16 PAQALLNEYKEMPKKLHALFQKRALEVGNIEVFYTPRRLCLFIKDFPLLTQETKEEFFGP 75 Query: 74 RVGAGKKA----------IDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRKPKRLIEDV 123 V GF + GL+ Q K +Y A + K+ +D+ Sbjct: 76 PVKIACNHQDKTQGLNALGLGFYQKLGLKDHQCFQTAFKNNKEVLYHAKIHA-KQPTKDL 134 Query: 124 LKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKIIDLDLKEI 183 + IV ++ + + KSMRW S+IRP+ +I + E+ + I++ Sbjct: 135 IMPIVLEFLEGLNFGKSMRWGNVEK-----SFIRPIHNICVLFNGENFND--IEVKEYGF 187 Query: 184 PCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILNDAHRLASAVGLEL 243 T HR I+V S Y LE+ V+LDP+ R IL + L + + + Sbjct: 188 KTKQATKAHRQEGFDFIQVDSPKAYFEVLEKNHVILDPKKREAKILQEIKELETKHHIIV 247 Query: 244 VEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFVTRTREG-----V 298 D+DLL+E++ + E+ V +G FDK +L LP E+I ++K NQ+ F ++ Sbjct: 248 EMDRDLLDEVVAITEYPTVLLGEFDKAFLKLPSEIITTSMKENQRYFAIFNQKSQEESPT 307 Query: 299 LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSLKESALKFN 358 L N FI+VSN D I+ GN +V+ ARL DA+ F++ D Sbjct: 308 LHNGFIVVSNAINKD-KQKIILGNQKVLKARLSDAVFFYEND------------------ 348 Query: 359 LDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQL--------IDADVAL 410 L KPLD + VVF +GT +++ R ++ + + Q ++ + L Sbjct: 349 --LKKPLDNAP----LESVVFVQGLGTLKDKMERESIIAQYLTQKYASSLNMPLEKALEL 402 Query: 411 VDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVPT 470 V RA+ ++KADL +E+V EF ELQG +G YA+ QNEN +++E P +P+ Sbjct: 403 VKRAVQIAKADLLSEVVYEFSELQGIMGYYYALKQNENELVALSVKEQYLPASENAPLPS 462 Query: 471 NKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQ--- 527 + S V+L+ K+D+L + +++ + PSGSKDP+ALRR + G+++II ++ L Sbjct: 463 SVFSAIVALSLKIDSLFSLFSVGKIPSGSKDPFALRRLSFGLLKIIAHYGLEFDLKADLK 522 Query: 528 --FIEDQNLILFFHDRLKLYLHDR-----DIRHDLIEAILRPENDNLLTIVDLIKHLNEF 580 F + F + L+ +L +R D +I ++L +++TI+ +K L F Sbjct: 523 NLFQKVGVYQSFDLEILEKFLLERFNNLIDCNPSIIRSVLNTNERDIVTIIQKVKALKRF 582 Query: 581 FSSAKGEKFLL-SAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISDFGTHIQ 639 K + ++ I + +N E E L+ + T Sbjct: 583 LDDPKNAQKKELLFSAFKRLATINKDRNPNEKSEFFTHLFKEPKEHALFEAFNAIKTSAF 642 Query: 640 ESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIILIVINVQ 699 ES+D K + S+ P+E +F VLV D E++ NR + L + L + +++ Sbjct: 643 ESLDSK-----IEAYFSLHAPLEEYFKSVLVMDKDIEIQKNRKNFLWDVYQSFLEIGDIK 697 Query: 700 KIV 702 +I Sbjct: 698 EIA 700 >gi|30410816|ref|NP_660484.2| glyS: glycyl-tRNA synthetase beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 712 Score = 591 bits (1524), Expect = e-166, Method: Composition-based stats. Identities = 203/728 (27%), Positives = 342/728 (46%), Gaps = 69/728 (9%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FL+EI +EE+P+ + K + L ++Y+N+ + TP RL L + L Sbjct: 25 KTFLVEIGTEELPSNILKKIILVFYKNFVDELSFNKILYKNINYFSTPRRLALQIIELDT 84 Query: 62 HSPEKIEERLGPRV-------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLR 114 + + GP + G KA + +S + ++K K G+ + ++ Sbjct: 85 SEKINEKIKKGPAIKHAFDENGNPTKAAYYWAKSCKINLNQAERLKT--KTGEWIIHRIQ 142 Query: 115 KPKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEK 174 + K IE + I+ ++++ +MRW + +IRP+++I+ +L EK Sbjct: 143 EKKEKIELLFPKIIEKILKQINLKNTMRW-----ETTNLRFIRPIRNIVMLL-----DEK 192 Query: 175 IIDLDLKEIPCGNITYGHRFHAPHPIKVQSLDHYIRDL-EEAMVLLDPECRRNAILNDAH 233 II ++ +P N Y H I +++ Y L ++ ++ + E R+ I +A Sbjct: 193 IIKSEVFNVPSNNFLYHHISCKEEKIYIKNAIEYPAVLFKKNKIIANYETRKEKIKYEAK 252 Query: 234 RLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLC-LPEELIRLTIKTNQKCFVT 292 ++A V + + LLEE+ LVE Q + F K Y+ +P++++ TI+ Q+CF Sbjct: 253 KIAKKVDGIIKTNPFLLEEVTSLVESPQALLARFKKDYINYIPKKILIHTIEKQQRCFSI 312 Query: 293 R--TREGVLANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRDQNNLPNLSSL 350 + + FI +SNI++ I+ GN +V+ ARL DA+ F K+D+ Sbjct: 313 YSNNSKKEILPYFIFISNIKSKKNKE-IILGNEKVMHARLSDAMFFLKQDRK-------- 363 Query: 351 KESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKIAQLIDA-DVA 409 + L+ + L V F+ +GT E+ R+++L + I+ + + Sbjct: 364 ------------RKLENYLPFLK--KVSFYNNLGTLYEKTLRLKLLIESISCYTNTINKN 409 Query: 410 LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEEHLKPRGPLENVP 469 + R+ VLSK DL T++V EFPELQG IG YA+ EN AI+E P + +P Sbjct: 410 DLIRSAVLSKCDLITQMVDEFPELQGTIGMYYALENKENKEVAIAIKEQYLPSFSGDELP 469 Query: 470 TNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIILENKIDIPLSQFI 529 + I +S++DK+DTL +AI E P+ KDP+ LRRA LGI+RII+ KI I L + I Sbjct: 470 STPIGCLLSISDKIDTLSGMFAIGETPTPEKDPFGLRRAALGILRIIITKKIPIDLKKII 529 Query: 530 EDQNLIL----------------FFHDRLKLYLHDRDIRHDLIEAILRPENDNLLTIVDL 573 E I FF RL + + +I+++L + L I Sbjct: 530 EISLKIYTFKKVNYSIISKKIIKFFISRLSFFYEKKGYSTKVIKSVLSCKLTEPLDIDKR 589 Query: 574 IKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREISLEISPQYLLLEAEKRLYAVISD 633 I +++ E +L AKRI I+ + IS EI + + EK L I Sbjct: 590 INAISDLKK---IESIILIAKRIDNIVKNNHQI---ISSEIHVELMKKTEEKNLLKEIKI 643 Query: 634 FGTHIQESMDHKRYHQIGDLLHSICEPIEIFFDQVLVNVDDREVRDNRLSLLQYIKNIIL 693 F + +E K+Y +I + + +PI+ FFD+V +N + E+R NRL LL I+ L Sbjct: 644 FNSKTKELFIQKKYKEILVEIKKLEKPIDNFFDKVQINHSNFEIRQNRLLLLIKIQKFFL 703 Query: 694 IVINVQKI 701 + N + Sbjct: 704 KIANFSYL 711 >gi|113955371|ref|YP_730489.1| glycyl-tRNA synthetase subunit beta [Synechococcus sp. CC9311] gi|113882722|gb|ABI47680.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9311] Length = 719 Score = 590 bits (1522), Expect = e-166, Method: Composition-based stats. Identities = 180/755 (23%), Positives = 315/755 (41%), Gaps = 95/755 (12%) Query: 2 PDFLLEIYSEEIPARMQHKAAEDLSIILIGLLKEEGVIYQNMRQYWTPHRLFLYLKGLSP 61 FLLEI +EE+PA H A + L +++ LK + + +R TP RL + ++ L Sbjct: 3 STFLLEIGTEELPAEFVHSALKQLQQMVVSDLKHLRLSHGQVRVSGTPRRLAVVVESLID 62 Query: 62 HSPEKIEERLGPRV------GAGKKAIDGFLRSTGLQTISDCQIKKDPKKGDVYLAVLRK 115 P+ EER GP V G A GF + G+ +D KG A + Sbjct: 63 RQPDLEEERKGPPVKQALVDGIPGPAALGFAKRCGVDPAELQ--SRDTSKGPCLFARVCT 120 Query: 116 PKRLIEDVLKTIVPVAIQKVPWPKSMRWSTTHSPISAFSWIRPLKSILCILVAEDAKEKI 175 P +L +P I + + MRW + RP++ ++ + +E + Sbjct: 121 PGDATTTLLIDRIPAWINGLQGRRFMRWGDGDQ-----RFSRPVRWLVSLYGSE-----L 170 Query: 176 IDLDLKE----IPCGNITYGHRFHAPHPIKVQSLDHYIRDLEEAMVLLDPECRRNAILND 231 I + L + G ++ HR +++Q D Y L +A V++D R + I + Sbjct: 171 IPVTLSAATPPVQSGRLSRSHR-LRDSTVEIQHADGYCDALAKAGVMVDRSQREHLIRSA 229 Query: 232 AHRLASAVGLELVEDKDLLEEIIGLVEWVQVFMGSFDKKYLCLPEELIRLTIKTNQKCFV 291 A A + + L EE++ LVE +V G YL LP E+I ++++Q+ Sbjct: 230 LETEAQACSASVDCPESLFEELVDLVEAPRVLSGEIADCYLDLPPEVIVTVMQSHQRYVP 289 Query: 292 TRTREGV-----------LANCFILVSNIQASDGGAAIVQGNSRVVAARLEDALHFWKRD 340 + L + F+LVSN S A IV+GN RV+ ARL DA F D Sbjct: 290 LKRENAHHDPLALQARDALLSRFLLVSNGLDS-ADATIVRGNERVLGARLADAEFFLNVD 348 Query: 341 QNNLPNLSSLKESALKFNLDLSKPLDQRMARLDMLDVVFHAKIGTQGERVSRIRVLGKKI 400 + + R + V F +G+ +R R+ + +++ Sbjct: 349 RKSASEAR----------------------RDALDRVTFAKGLGSLRDRCDRMSWMTERL 386 Query: 401 AQLIDADVA---LVDRAIVLSKADLCTEIVREFPELQGKIGKEYAVLQNENISCCDAIEE 457 + RA K DL +++V EFPELQG IG +Y + + E+ A+ E Sbjct: 387 IDSLSITSEIAIHAKRAAHFCKHDLVSQMVGEFPELQGLIGGKYLLEEGEDRQVALAVAE 446 Query: 458 HLKPRGPLENVPTNKISITVSLADKLDTLINFWAINEKPSGSKDPYALRRATLGIIRIIL 517 H +PRG + +P++ ++L+++L+ L++ +A ++PSGS DPYALRRA GI++I+ Sbjct: 447 HYQPRGAGDALPSSDAGALLALSERLELLLSIYAKGDRPSGSSDPYALRRAGNGIVQILW 506 Query: 518 ENKIDIPLSQFIEDQNLI--------------------LFFHDRLKLYLHDRDIRHDLIE 557 + + L + + L R+ + DL++ Sbjct: 507 DRGWRLSLQSLLSNAARYWAELFPSFAVQPEVLVADLSLLLRQRMVSQFEEDGFPADLVQ 566 Query: 558 AIL------RPENDNLLTIVDLIKHLNEFFSSAKGEKFLLSAKRIFQILAIEEKKNREIS 611 A+ + + + + L++ + + +R ++ + + +++ Sbjct: 567 AVAGEAVGDARLLSDPVDARERLALLHQLRRDERLQAVQAVVQRAAKLAEKGDLGSDQLT 626 Query: 612 LE--ISPQYLLLEAEKRLYAVISDFGTHIQESMDHKRYHQIGDLLHSICEPIEIFFD--- 666 + P +E L + D Q Y Q+ + L + +E FFD Sbjct: 627 PSGVVQPDLFESASEASLLQSLDDLSPLAQ----SGNYIQLAEGLQDAAKALEAFFDGPN 682 Query: 667 QVLVNVDDREVRDNRLSLLQYIKNIILIVINVQKI 701 V+V D+ +VR NRL+LL +KN ++ I Sbjct: 683 SVMVMTDNLDVRRNRLNLLGVLKNQASVLAQFDCI 717 >gi|78212759|ref|YP_381538.1| glycyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9605] gi|78197218|gb|ABB34983.1| glycyl-tRNA synt